BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16116
(612 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328716236|ref|XP_001946855.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 858
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 166/237 (70%), Positives = 190/237 (80%), Gaps = 11/237 (4%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCLSA GRRNGEA+VRF++QEHRDMA+KRHKHHI RYIEV KANGEDFINVA
Sbjct: 291 IAKGGVALCLSAHGRRNGEAVVRFVNQEHRDMAMKRHKHHIGSRYIEVYKANGEDFINVA 350
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GGN++EAQ FLT+GAQVI+RMRGLPY+CTAK VI FFE G E +C+VMDGE+GVLFVKKP
Sbjct: 351 GGNSSEAQTFLTKGAQVIVRMRGLPYDCTAKDVITFFENG-EQTCSVMDGEDGVLFVKKP 409
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ATGDAFVLF E++A KALSKH++ IG RYIELFRSTTAEVQQVLN+ M+ P S
Sbjct: 410 DGRATGDAFVLFADEDDAPKALSKHRDLIGTRYIELFRSTTAEVQQVLNRAMD-PSVRST 468
Query: 543 TSSNNG---------LSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
S +NG + L VP+ LPQH+ITSGTRKDCIRLRGLPYEA
Sbjct: 469 ASDSNGNITTPVTTTAGVNNSPTALLGHVPLLPLPQHVITSGTRKDCIRLRGLPYEA 525
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 92/124 (74%), Gaps = 8/124 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHILEFLGE + NIV+QGVHMVYNS G SGEAFIQM++E SA AA +H+ M FGK
Sbjct: 527 VEHILEFLGEHSKNIVFQGVHMVYNSVGHASGEAFIQMNNEGSAAQAAMAKHHNYMSFGK 586
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPV-GKTLLS-PGMLPHSSQPLYPQHNTQI 179
KQRYIEVFQCSGEDM+LVL G S A+SPV K LLS PGMLP +QPL +Q+
Sbjct: 587 KQRYIEVFQCSGEDMHLVLTGG-GAASGALSPVAAKALLSPPGMLP--AQPLMT--TSQV 641
Query: 180 -NPG 182
NPG
Sbjct: 642 ANPG 645
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 90/212 (42%), Gaps = 50/212 (23%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G GV GR G+A V F D++ AL +H+ I RYIE+ T A + +N
Sbjct: 399 GEDGVLFVKKPDGRATGDAFVLFADEDDAPKALSKHRDLIGTRYIELFRSTTAEVQQVLN 458
Query: 421 VA-----------------------GGNNNEAQAFL-------------TRGAQV-IIRM 443
A G NN A L T G + IR+
Sbjct: 459 RAMDPSVRSTASDSNGNITTPVTTTAGVNNSPTALLGHVPLLPLPQHVITSGTRKDCIRL 518
Query: 444 RGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE-EEADK 502
RGLPYE + +++F E+S N++ +GV V G A+G+AF+ E A
Sbjct: 519 RGLPYEANVEHILEFL---GEHSKNIV--FQGVHMVYNSVGHASGEAFIQMNNEGSAAQA 573
Query: 503 ALSKHKESIGI----RYIELFRSTTAEVQQVL 530
A++KH + RYIE+F+ + ++ VL
Sbjct: 574 AMAKHHNYMSFGKKQRYIEVFQCSGEDMHLVL 605
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 6 YYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQY 50
Y C +VATAG QGNLLGSDEQEI+LLIYV++D N V+ QY
Sbjct: 45 YLCALYVATAGHQGNLLGSDEQEIVLLIYVVVDMTTNTVVGIQQY 89
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 43/162 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF N+ G GV G+ G+A V F +E
Sbjct: 267 VVRARGLPWQSSDQDIAKFFRG-----LNIAKG--GVALCLSAHGRRNGEAVVRFVNQEH 319
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D A+ +HK IG RYIE++++ + + + NS S Q L+
Sbjct: 320 RDMAMKRHKHHIGSRYIEVYKANGEDF-------INVAGGNS--------SEAQTFLTKG 364
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FF 599
AQV +R+RGLPY+ C D+ FF
Sbjct: 365 AQV-----------------IVRMRGLPYD--CTAKDVITFF 387
>gi|312385573|gb|EFR30037.1| hypothetical protein AND_00606 [Anopheles darlingi]
Length = 1660
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/225 (72%), Positives = 189/225 (84%), Gaps = 10/225 (4%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF+ QEHRDMALKRHKHHI RYIEV +ANGEDF++VAGG
Sbjct: 273 GGVALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHIGSRYIEVYRANGEDFLSVAGGA 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFLT+GAQVIIRMRGLPY+CTAKQV+DFF G ENSCNV+DG +G+LFVKKPDG+
Sbjct: 333 SNEAQAFLTKGAQVIIRMRGLPYDCTAKQVLDFFANG-ENSCNVLDGADGILFVKKPDGR 391
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLFE+E + +KALSKH+E IG RYIELFRSTTAEVQQVLN++M+ PK
Sbjct: 392 ATGDAFVLFEQESDVNKALSKHRELIGQRYIELFRSTTAEVQQVLNRSMD-PKTYE---- 446
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
Q P+++ L QV + LPQH+ITSGT K+CIRLRGLPYEA
Sbjct: 447 ----PPQPPLIAQLPQVQMQLLPQHVITSGTEKNCIRLRGLPYEA 487
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL FL +FA +IVYQGVH+VYN+QGQ +GEAFIQMDSE +AY +AQ +H++NM+FGK
Sbjct: 489 VEHILHFLDDFAKHIVYQGVHLVYNAQGQFNGEAFIQMDSEAAAYQSAQQKHHKNMMFGK 548
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGML 164
KQRYIEVFQCSG+DMN+VLNG SP +LLSPGML
Sbjct: 549 KQRYIEVFQCSGDDMNMVLNGGF--QSPNAGLSKPSLLSPGML 589
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 39/167 (23%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 245 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPQGRRNGEALVRFVSQE 297
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R+ + L+ + + Q L+
Sbjct: 298 HRDMALKRHKHHIGSRYIEVYRANGEDF---------------LSVAGGASNEAQAFLTK 342
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQDS 605
AQV IR+RGLPY+ + FF ++S
Sbjct: 343 GAQV-----------------IIRMRGLPYDCTAKQVLDFFANGENS 372
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F + + AL +H+ I +RYIE+ ++ + V
Sbjct: 378 GADGILFVKKPDGRATGDAFVLFEQESDVNKALSKHRELIGQRYIELFRSTTAEVQQVLN 437
Query: 424 GNNNEA----------------------QAFLTRGAQV-IIRMRGLPYECTAKQVIDFFE 460
+ + Q +T G + IR+RGLPYE + ++ F +
Sbjct: 438 RSMDPKTYEPPQPPLIAQLPQVQMQLLPQHVITSGTEKNCIRLRGLPYEAKVEHILHFLD 497
Query: 461 AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA-DKALSKHKESIGI----RY 515
++ +GV V G+ G+AF+ + E A A KH +++ RY
Sbjct: 498 DFAKHIVY-----QGVHLVYNAQGQFNGEAFIQMDSEAAAYQSAQQKHHKNMMFGKKQRY 552
Query: 516 IELFRSTTAEVQQVLNKTMELP-----KNNSLTSSNNGLSAQQP-------MLSHLAQVP 563
IE+F+ + ++ VLN + P K + L+ +A QP LS +Q+P
Sbjct: 553 IEVFQCSGDDMNMVLNGGFQSPNAGLSKPSLLSPGMLQTAATQPPTHAPQQTLS-FSQIP 611
Query: 564 VPYLPQHIIT 573
+P P H ++
Sbjct: 612 LPIPPPHSLS 621
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 62 VEHILEFL--GEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNM 117
+ +L+F GE + N++ G+ V G+ +G+AF+ + E A L +R +
Sbjct: 359 AKQVLDFFANGENSCNVLDGADGILFVKKPDGRATGDAFVLFEQESDVNKA--LSKHREL 416
Query: 118 IFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQH 175
I QRYIE+F+ + ++ VLN + P + P L++ LP L PQH
Sbjct: 417 I---GQRYIELFRSTTAEVQQVLNRSMDPKT--YEPPQPPLIA--QLPQVQMQLLPQH 467
>gi|194756410|ref|XP_001960472.1| GF13378 [Drosophila ananassae]
gi|190621770|gb|EDV37294.1| GF13378 [Drosophila ananassae]
Length = 885
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 157/226 (69%), Positives = 188/226 (83%), Gaps = 5/226 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RFI QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 310 GGVALCLSPLGRRNGEALIRFISQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 369
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 370 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLDFFTTGDTAPCHVLDGNEGVLFVKKPDGR 429
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 430 ATGDAFVLFAHESDAAKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKNY----E 484
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
+ G +Q P+++ L + +P LPQH+ITSGT ++CIRLRGLPYEA+
Sbjct: 485 SGGNHSQPPLIAQLPTMQLPLLPQHLITSGTTRNCIRLRGLPYEAM 530
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 73/86 (84%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL FA +I+YQGVHMV N+QGQPSGEAFIQMDSE SA L AQ +HN+ M+
Sbjct: 528 EAMVEHILHFLDGFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMV 587
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVL 144
FGKK RYIEVFQCSG+DMN+VLNG L
Sbjct: 588 FGKKFRYIEVFQCSGDDMNMVLNGGL 613
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 40/165 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 282 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFISQE 334
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 335 HRDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 379
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQ 602
AQV IR+RGLPY+ ++D F G
Sbjct: 380 GAQV-----------------IIRMRGLPYDCTAKQVLDFFTTGD 407
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F + AL RH+ I +RYIE+ ++ + V
Sbjct: 419 GVLFVKKPDGRATGDAFVLFAHESDAAKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 478
Query: 422 ------AGGNNNE---------------AQAFLTRG-AQVIIRMRGLPYECTAKQVIDFF 459
+GGN+++ Q +T G + IR+RGLPYE + ++ F
Sbjct: 479 DPKNYESGGNHSQPPLIAQLPTMQLPLLPQHLITSGTTRNCIRLRGLPYEAMVEHILHFL 538
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSKHKESI----GIR 514
+ ++ +GV V G+ +G+AF+ + E+ A A KH + + R
Sbjct: 539 DGFAKHIIY-----QGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMVFGKKFR 593
Query: 515 YIELFRSTTAEVQQVLNKTMELP 537
YIE+F+ + ++ VLN + P
Sbjct: 594 YIEVFQCSGDDMNMVLNGGLASP 616
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHIVSLYIATCGQNGPGLGSDEKEIILLVFVLLEVTSGQIVGTKQ 49
>gi|170047639|ref|XP_001851321.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870002|gb|EDS33385.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 677
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 186/225 (82%), Gaps = 10/225 (4%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ VAGG
Sbjct: 73 GGVALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHISNRYIEVYRASGEDFLAVAGGA 132
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV++FF G E SC V+DG +G+LFVKKPDG+
Sbjct: 133 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLEFFANG-ETSCTVLDGADGILFVKKPDGR 191
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF +E +A KALSKH+ESIG RYIELFRSTTAEVQQVLN++M+ PK
Sbjct: 192 ATGDAFVLFAQESDASKALSKHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKTYE---- 246
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
Q P+++ L V +P LPQH+ITSGT K+CIRLRGLPYEA
Sbjct: 247 ----PPQPPLIAALPPVQMPLLPQHVITSGTEKNCIRLRGLPYEA 287
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 3/103 (2%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL FL +FA +IVYQGVH+VYN+QGQ +GEAFIQMDSE +AY +AQ +H++NM+FGK
Sbjct: 289 VEHILHFLEDFAKHIVYQGVHLVYNAQGQFNGEAFIQMDSEVAAYQSAQQKHHKNMMFGK 348
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGML 164
KQRYIEVFQCSG+DMN+VLNG + P LLSPGML
Sbjct: 349 KQRYIEVFQCSGDDMNMVLNGGFQQPNNISKP---PLLSPGML 388
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F + AL +H+ I +RYIE+ ++ + V
Sbjct: 178 GADGILFVKKPDGRATGDAFVLFAQESDASKALSKHRESIGQRYIELFRSTTAEVQQVLN 237
Query: 424 GNNNEA----------------------QAFLTRGAQV-IIRMRGLPYECTAKQVIDFFE 460
+ + Q +T G + IR+RGLPYE + ++ F E
Sbjct: 238 RSMDPKTYEPPQPPLIAALPPVQMPLLPQHVITSGTEKNCIRLRGLPYEAKVEHILHFLE 297
Query: 461 AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA-DKALSKHKESIGI----RY 515
++ +GV V G+ G+AF+ + E A A KH +++ RY
Sbjct: 298 DFAKHIVY-----QGVHLVYNAQGQFNGEAFIQMDSEVAAYQSAQQKHHKNMMFGKKQRY 352
Query: 516 IELFRSTTAEVQQVLNKTMELPKNNS 541
IE+F+ + ++ VLN + P N S
Sbjct: 353 IEVFQCSGDDMNMVLNGGFQQPNNIS 378
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 34/145 (23%)
Query: 463 TENSCNVMDGEE--GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
+ +S GE+ GV P G+ G+A V F +E D AL +HK I RYIE++R
Sbjct: 60 SSSSATTGGGEKRGGVALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHISNRYIEVYR 119
Query: 521 STTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDC 580
++ + L + + Q LS AQV
Sbjct: 120 ASGEDF---------------LAVAGGASNEAQAFLSKGAQV-----------------I 147
Query: 581 IRLRGLPYEALCILMDIFFVGQQDS 605
IR+RGLPY+ + FF + S
Sbjct: 148 IRMRGLPYDCTAKQVLEFFANGETS 172
>gi|281363439|ref|NP_001163161.1| fusilli, isoform G [Drosophila melanogaster]
gi|272432494|gb|ACZ94433.1| fusilli, isoform G [Drosophila melanogaster]
Length = 860
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 187/226 (82%), Gaps = 5/226 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKN----YE 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
+ G +Q P+++ L + +P LPQH+ITSGT K+CIRLRGLPYEA+
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQHLITSGTTKNCIRLRGLPYEAM 527
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 525 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 584
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 585 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 617
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 377
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 378 AQV-----------------IIRMRGLPYDATAKQVLDFFTTG 403
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE---------------AQAFLTRG-AQVIIRMRGLPYECTAKQVIDFF 459
+GG +++ Q +T G + IR+RGLPYE + ++ F
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQHLITSGTTKNCIRLRGLPYEAMVEHILHFL 535
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSKHKESI----GIR 514
+ ++ +GV V G+ +G+AF+ + EE A A +H + R
Sbjct: 536 DDFAKHIIY-----QGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYR 590
Query: 515 YIELFRSTTAEVQQVLNKTMELP 537
YIE+F+ + ++ VLN + P
Sbjct: 591 YIEVFQCSGDDMNMVLNGGLASP 613
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|240849679|gb|ACS54296.1| RE48185p [Drosophila melanogaster]
Length = 860
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/226 (68%), Positives = 187/226 (82%), Gaps = 5/226 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFV+KPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDAPPCHVLDGNEGVLFVEKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKN----YE 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
+ G +Q P+++ L + +P LPQH+ITSGT K+CIRLRGLPYEA+
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQHLITSGTTKNCIRLRGLPYEAM 527
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 525 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 584
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 585 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 617
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVEKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE---------------AQAFLTRG-AQVIIRMRGLPYECTAKQVIDFF 459
+GG +++ Q +T G + IR+RGLPYE + ++ F
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQHLITSGTTKNCIRLRGLPYEAMVEHILHFL 535
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK---HKESIG--IR 514
+ ++ +GV V G+ +G+AF+ + EE A + H G R
Sbjct: 536 DDFAKHIIY-----QGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYR 590
Query: 515 YIELFRSTTAEVQQVLNKTMELP 537
YIE+F+ + ++ VLN + P
Sbjct: 591 YIEVFQCSGDDMNMVLNGGLASP 613
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|195442063|ref|XP_002068780.1| GK17961 [Drosophila willistoni]
gi|194164865|gb|EDW79766.1| GK17961 [Drosophila willistoni]
Length = 864
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 158/248 (63%), Positives = 190/248 (76%), Gaps = 28/248 (11%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 322 GGVALCLSPLGRRNGEALIRFVSQEHRDMALKRHKHHIGARYIEVYRASGEDFLAIAGGA 381
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV+DFF G ++ C+V+DG EGVLFVKKPDG+
Sbjct: 382 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLDFFTTG-DSPCSVLDGTEGVLFVKKPDGR 440
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PK T
Sbjct: 441 ATGDAFVLFALEADAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PK----TYE 495
Query: 546 NNGLSAQQPMLSHLAQVPVPYL----------------------PQHIITSGTRKDCIRL 583
N +Q P+++ L Q+ +P L PQH+ITSGT K+CIRL
Sbjct: 496 ANNSHSQPPLIAQLPQMQLPLLPQVGAIAIAGHGHANPLCPIPPPQHLITSGTIKNCIRL 555
Query: 584 RGLPYEAL 591
RGLPYEA+
Sbjct: 556 RGLPYEAM 563
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 86/111 (77%), Gaps = 7/111 (6%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMDSE SA L AQ +HN+ M+
Sbjct: 561 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMV 620
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVL--PPTSPAISPVGK-----TLLSPG 162
FGKK RYIEVFQCSG+DMN+VLNG L P +P + +G +LLSPG
Sbjct: 621 FGKKFRYIEVFQCSGDDMNMVLNGGLASPVGAPQPTHLGHAHKQPSLLSPG 671
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 40/165 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF C + + GV P G+ G+A + F +E
Sbjct: 294 CIVRARGLPWQSSDQDIAKFF-------CGLNVAKGGVALCLSPLGRRNGEALIRFVSQE 346
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 347 HRDMALKRHKHHIGARYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 391
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQ 602
AQV IR+RGLPY+ ++D F G
Sbjct: 392 GAQV-----------------IIRMRGLPYDCTAKQVLDFFTTGD 419
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 59/228 (25%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF----- 418
G GV GR G+A V F + AL RH+ I +RYIE+ ++ +
Sbjct: 427 GTEGVLFVKKPDGRATGDAFVLFALEADAPKALGRHRESIGQRYIELFRSTTAEVQQVLN 486
Query: 419 ------------------------------------INVAG-GNNNE------AQAFLTR 435
I +AG G+ N Q +T
Sbjct: 487 RSMDPKTYEANNSHSQPPLIAQLPQMQLPLLPQVGAIAIAGHGHANPLCPIPPPQHLITS 546
Query: 436 GA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
G + IR+RGLPYE + ++ F + ++ +GV V G+ +G+AF+
Sbjct: 547 GTIKNCIRLRGLPYEAMVEHILHFLDDFAKHII-----YQGVHMVINAQGQPSGEAFIQM 601
Query: 495 EKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+ E+ A A KH + + RYIE+F+ + ++ VLN + P
Sbjct: 602 DSEDSARLCAQRKHNQFMVFGKKFRYIEVFQCSGDDMNMVLNGGLASP 649
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP+ +VAT G G LGSDE+EIILL+YV++D +++ T Q
Sbjct: 1 MQVPERIVSLYVATCGQNGPGLGSDEKEIILLVYVLLDVATGQIIGTKQ 49
>gi|194882767|ref|XP_001975482.1| GG22342 [Drosophila erecta]
gi|190658669|gb|EDV55882.1| GG22342 [Drosophila erecta]
Length = 892
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/257 (61%), Positives = 188/257 (73%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF AG C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTAGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFAHESDASKALCRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKNYE---- 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 541
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 542 GTTKNCIRLRGLPYEAM 558
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 40/164 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 279 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQE 331
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 332 HRDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 376
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 377 GAQV-----------------IIRMRGLPYDATAKQVLDFFTAG 403
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F + AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVKKPDGRATGDAFVLFAHESDASKALCRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 535
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A A +H + RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|158301007|ref|XP_320791.4| AGAP011722-PA [Anopheles gambiae str. PEST]
gi|157013433|gb|EAA00060.4| AGAP011722-PA [Anopheles gambiae str. PEST]
Length = 861
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 160/249 (64%), Positives = 188/249 (75%), Gaps = 25/249 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF+ QEHRDMALKRHKHHI RYIEV +ANGEDF+ VAGG
Sbjct: 233 GGVALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHIGNRYIEVYRANGEDFLAVAGGA 292
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV+DFF G ENSCNV+DG +G+LFVKKPDG+
Sbjct: 293 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLDFFANG-ENSCNVLDGADGILFVKKPDGR 351
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK------- 538
ATGDAFVLFE++ +A KALSKH+ESIG RYIELFRSTTAEVQQV + + +
Sbjct: 352 ATGDAFVLFEQDSDASKALSKHRESIGQRYIELFRSTTAEVQQVCTSLVSVCRVFAQQKN 411
Query: 539 --NNSLT--------------SSNNGLSAQQPMLSHLAQVP-VPYLPQHIITSGTRKDCI 581
N LT S + + + P +AQ+P + LPQH+ITSG K+CI
Sbjct: 412 SPTNRLTLLINVVKHPPQVLNRSMDPKTYEPPQPPLIAQLPQMQLLPQHVITSGVEKNCI 471
Query: 582 RLRGLPYEA 590
RLRGLPYEA
Sbjct: 472 RLRGLPYEA 480
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 75/81 (92%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL FL +FA++I+YQGVH+VYN+QGQ +GEAFIQMDSE +AY +AQ +H++NM+FGK
Sbjct: 482 VEHILHFLDDFANHIIYQGVHLVYNAQGQFNGEAFIQMDSETAAYQSAQQKHHKNMMFGK 541
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
KQRYIEVFQCSGEDMN+VLNG
Sbjct: 542 KQRYIEVFQCSGEDMNMVLNG 562
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 39/167 (23%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 205 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPQGRRNGEALVRFVSQE 257
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R+ + L + + Q LS
Sbjct: 258 HRDMALKRHKHHIGNRYIEVYRANGEDF---------------LAVAGGASNEAQAFLSK 302
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQDS 605
AQV IR+RGLPY+ + FF ++S
Sbjct: 303 GAQV-----------------IIRMRGLPYDCTAKQVLDFFANGENS 332
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 430 QAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + + + +++ +GV V G+ G
Sbjct: 459 QHVITSGVEKNCIRLRGLPYEAKVEHILHFLD---DFANHII--YQGVHLVYNAQGQFNG 513
Query: 489 DAFVLFEKEEEA-DKALSKHKESIGI----RYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + E A A KH +++ RYIE+F+ + ++ VLN + P
Sbjct: 514 EAFIQMDSETAAYQSAQQKHHKNMMFGKKQRYIEVFQCSGEDMNMVLNGGFQQP 567
>gi|198461689|ref|XP_001362087.2| GA20896 [Drosophila pseudoobscura pseudoobscura]
gi|198137420|gb|EAL26667.2| GA20896 [Drosophila pseudoobscura pseudoobscura]
Length = 910
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 158/247 (63%), Positives = 186/247 (75%), Gaps = 22/247 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 326 GGVALCLSPLGRRNGEALIRFVSQEHRDMALKRHKHHIGARYIEVYRASGEDFLAIAGGA 385
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV++FF G E C+V+D EGVLFVKKPDG+
Sbjct: 386 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLEFFTTG-EAPCHVLDANEGVLFVKKPDGR 444
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ + + S
Sbjct: 445 ATGDAFVLFANEGDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMDPKTFETSSHS 504
Query: 546 NNGLSAQQPM--LSHLAQV-------------------PVPYLPQHIITSGTRKDCIRLR 584
L AQ P L L QV P P+ PQH+ITSGT K+CIRLR
Sbjct: 505 QPPLIAQLPTMQLPLLPQVGVVTHGNGRVPVPVPANLCPHPHPPQHLITSGTTKNCIRLR 564
Query: 585 GLPYEAL 591
GLPYEA+
Sbjct: 565 GLPYEAM 571
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 74/86 (86%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMDSE SA L AQ +HN+ M+
Sbjct: 569 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMV 628
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVL 144
FGKK RYIEVFQCSG+DMN+VLNG L
Sbjct: 629 FGKKFRYIEVFQCSGDDMNMVLNGGL 654
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 40/165 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 298 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVSQE 350
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 351 HRDMALKRHKHHIGARYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 395
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQ 602
AQV IR+RGLPY+ +++ F G+
Sbjct: 396 GAQV-----------------IIRMRGLPYDCTAKQVLEFFTTGE 423
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 65/248 (26%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN--- 420
GV GR G+A V F ++ AL RH+ I +RYIE+ T A + +N
Sbjct: 434 GVLFVKKPDGRATGDAFVLFANEGDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 493
Query: 421 --------------------------------VAGGNN--------------NEAQAFLT 434
V GN + Q +T
Sbjct: 494 DPKTFETSSHSQPPLIAQLPTMQLPLLPQVGVVTHGNGRVPVPVPANLCPHPHPPQHLIT 553
Query: 435 RGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
G + IR+RGLPYE + ++ F + ++ +GV V G+ +G+AF+
Sbjct: 554 SGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHII-----YQGVHMVINAQGQPSGEAFIQ 608
Query: 494 FEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+ E+ A A KH + + RYIE+F+ + ++ VLN + P + +++G
Sbjct: 609 MDSEDSARLCAQRKHNQFMVFGKKFRYIEVFQCSGDDMNMVLNGGLASPVAQA--PAHHG 666
Query: 549 LSAQQPML 556
+ +QP L
Sbjct: 667 HAHKQPSL 674
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGPGLGSDEKEIILLVFVLLEVATGQIIGTKQ 49
>gi|195488502|ref|XP_002092343.1| GE14142 [Drosophila yakuba]
gi|194178444|gb|EDW92055.1| GE14142 [Drosophila yakuba]
Length = 889
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/257 (61%), Positives = 187/257 (72%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFECQEHRDMALKRHKHHIGSRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF AG C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTAGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFAHESDASKALCRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKNYE---- 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 541
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 542 GTTKNCIRLRGLPYEAM 558
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 40/164 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + FE +E
Sbjct: 279 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFECQE 331
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 332 HRDMALKRHKHHIGSRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 376
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 377 GAQV-----------------IIRMRGLPYDATAKQVLDFFTAG 403
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F + AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVKKPDGRATGDAFVLFAHESDASKALCRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 535
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A A +H + RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|195056424|ref|XP_001995099.1| GH22967 [Drosophila grimshawi]
gi|193899305|gb|EDV98171.1| GH22967 [Drosophila grimshawi]
Length = 1007
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/251 (62%), Positives = 186/251 (74%), Gaps = 26/251 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVSQEHRDMALKRHKHHIGSRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CT KQV++FF G E+ C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDCTPKQVLEFFTTG-ESPCHVLDGNEGVLFVKKPDGR 425
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E ++ KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ S S
Sbjct: 426 ATGDAFVLFANECDSSKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMDPKTYESNNHS 485
Query: 546 NNGLSAQQPML------------------------SHLAQVP-VPYLPQHIITSGTRKDC 580
L AQ P + SH P +P+ PQH+ITSGT K+C
Sbjct: 486 QPPLIAQLPTMQLPLLPQVGAAAGGHALNPLSANASHANLCPQLPHAPQHLITSGTTKNC 545
Query: 581 IRLRGLPYEAL 591
IRLRGLPYEA+
Sbjct: 546 IRLRGLPYEAM 556
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 77/104 (74%), Gaps = 6/104 (5%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ +HN+ M+
Sbjct: 554 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRKHNQFMV 613
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPG 162
FGKK RYIEVFQCSG+DMN VLNG L SPV PG
Sbjct: 614 FGKKFRYIEVFQCSGDDMNHVLNGGL------ASPVATAAPHPG 651
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 44/172 (25%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 279 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVSQE 331
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 332 HRDMALKRHKHHIGSRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 376
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI---LMDIFFVGQQDSFV 607
AQV IR+RGLPY+ C +++ F G+ V
Sbjct: 377 GAQV-----------------IIRMRGLPYD--CTPKQVLEFFTTGESPCHV 409
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 88/236 (37%), Gaps = 67/236 (28%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE-------------- 409
G GV GR G+A V F ++ AL RH+ I +RYIE
Sbjct: 412 GNEGVLFVKKPDGRATGDAFVLFANECDSSKALGRHRESIGQRYIELFRSTTAEVQQVLN 471
Query: 410 --------------------------------VTKANGEDFINVAGGNNNEA-------- 429
V A G +N N + A
Sbjct: 472 RSMDPKTYESNNHSQPPLIAQLPTMQLPLLPQVGAAAGGHALNPLSANASHANLCPQLPH 531
Query: 430 --QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+
Sbjct: 532 APQHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHII-----YQGVHMVINAQGQP 586
Query: 487 TGDAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+G+AF+ + EE A A KH + + RYIE+F+ + ++ VLN + P
Sbjct: 587 SGEAFIQMDLEESARLCAQRKHNQFMVFGKKFRYIEVFQCSGDDMNHVLNGGLASP 642
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 151/381 (39%), Gaps = 77/381 (20%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + + G+ +GEA I+ S+ +A + RH ++ RYIEV++ SGE
Sbjct: 303 NVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMALK-RHKHHI----GSRYIEVYRASGE 357
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL----------YPQHNTQINPGLS 184
D + G +S + ++ LP+ P P H N G+
Sbjct: 358 DFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDCTPKQVLEFFTTGESPCHVLDGNEGVL 417
Query: 185 HL---------DPLV----NVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAALNK---P 228
+ D V ++AL + + + Q+ + L A+ LN+ P
Sbjct: 418 FVKKPDGRATGDAFVLFANECDSSKALGRHRESIGQR-YIELFRSTTAEVQQVLNRSMDP 476
Query: 229 HNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMN 288
N H+ PPL ++ T+ LP LP V + G
Sbjct: 477 KTYESNNHSQ-------------PPLIAQLPTM--QLPLLPQVGAAAG------------ 509
Query: 289 TAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIW 348
H L P++ N + PQ LP P H + T T N + L L
Sbjct: 510 -GHALNPLSA----NASHANLCPQ-LPHAPQH-------LITSGTTKNCIRLRGLPYEAM 556
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF-IDQEHRDMALKRHKHHI---- 403
+ +L+ + + + + GV + ++A G+ +GEA ++ +++ R A ++H +
Sbjct: 557 VEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRKHNQFMVFGK 616
Query: 404 DKRYIEVTKANGEDFINVAGG 424
RYIEV + +G+D +V G
Sbjct: 617 KFRYIEVFQCSGDDMNHVLNG 637
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL+YV+++ +++ T Q
Sbjct: 1 MQVPEHIVSLYIATCGQNGPGLGSDEKEIILLVYVLLEVATGQIIGTKQ 49
>gi|17865825|ref|NP_524691.1| fusilli, isoform D [Drosophila melanogaster]
gi|24653906|ref|NP_725481.1| fusilli, isoform E [Drosophila melanogaster]
gi|24653908|ref|NP_725482.1| fusilli, isoform F [Drosophila melanogaster]
gi|75021514|sp|Q9BJZ5.1|FUSIL_DROME RecName: Full=RNA-binding protein fusilli
gi|13183640|gb|AAK15280.1|AF321979_1 fusilli [Drosophila melanogaster]
gi|21645395|gb|AAM70981.1| fusilli, isoform D [Drosophila melanogaster]
gi|21645396|gb|AAM70982.1| fusilli, isoform E [Drosophila melanogaster]
gi|21645397|gb|AAM70983.1| fusilli, isoform F [Drosophila melanogaster]
Length = 967
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKN----YE 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 541
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 542 GTTKNCIRLRGLPYEAM 558
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 377
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 378 AQV-----------------IIRMRGLPYDATAKQVLDFFTTG 403
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 535
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEADKALSK---HKESIG--IRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A + H G RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 299 PFFFNMPRM--PVTPQVLPKFPVHQLNQTPT-----------------VYTIPTPGNPVA 339
P +P M P+ PQV H L +P + T T N +
Sbjct: 490 PLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIR 549
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF-IDQEHRDMALKR 398
L L + +L+ + + + + GV + ++A G+ +GEA ++ +++ R A +R
Sbjct: 550 LRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRR 609
Query: 399 HKHHI----DKRYIEVTKANGEDFINVAGGN 425
H H++ RYIEV + +G+D V G
Sbjct: 610 HNHYMMFGKKYRYIEVFQCSGDDMNMVLNGG 640
>gi|24653901|ref|NP_725479.1| fusilli, isoform C [Drosophila melanogaster]
gi|21645394|gb|AAM70980.1| fusilli, isoform C [Drosophila melanogaster]
Length = 891
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKN----YE 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 541
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 542 GTTKNCIRLRGLPYEAM 558
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 377
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 378 AQV-----------------IIRMRGLPYDATAKQVLDFFTTG 403
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 535
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A A +H + RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|322778928|gb|EFZ09344.1| hypothetical protein SINV_16613 [Solenopsis invicta]
Length = 565
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/226 (68%), Positives = 180/226 (79%), Gaps = 15/226 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRFI++EHRDMALKRHKHH+ RYIEV KA+GEDF+ VAGG
Sbjct: 5 GGVALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGTRYIEVYKASGEDFVGVAGGT 64
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA AFL+RGAQVI+RMRGLPY+C AKQV++FF++G + C V+DGE+GVLFVKKPDG+
Sbjct: 65 SGEAHAFLSRGAQVIVRMRGLPYDCVAKQVLEFFQSG-QKPCQVLDGEDGVLFVKKPDGR 123
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF KEE+A KALSKH++ IG RYIELFRSTTAEVQQVLN+ + PK
Sbjct: 124 ATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLNRATD-PK------- 175
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
Q + P LPQHIITSGTRKDC+RLRGLPYEAL
Sbjct: 176 ------QMILPPPPIAQLPPLLPQHIITSGTRKDCVRLRGLPYEAL 215
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 84/106 (79%), Gaps = 6/106 (5%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ LVEHILEF+GE + NIVYQGVHMVYN+QGQPSGEAFIQMDSE SAY A RH+R MI
Sbjct: 213 EALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSEASAYACASQRHHRYMI 272
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGML 164
+GKKQRYIEVFQCSG+DMNLVL G + P P K LLSPG L
Sbjct: 273 YGKKQRYIEVFQCSGDDMNLVLTGAVTP------PSTKALLSPGTL 312
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 361 QVL-GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGE 416
QVL G GV GR G+A V F +E AL +H+ I RYIE+ T A +
Sbjct: 106 QVLDGEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQ 165
Query: 417 DFINVAGG--------------NNNEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEA 461
+N A Q +T G + +R+RGLPYE + +++F
Sbjct: 166 QVLNRATDPKQMILPPPPIAQLPPLLPQHIITSGTRKDCVRLRGLPYEALVEHILEFM-- 223
Query: 462 GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYI 516
E+S N++ +GV V G+ +G+AF+ + E A S+ I RYI
Sbjct: 224 -GEHSKNIV--YQGVHMVYNAQGQPSGEAFIQMDSEASAYACASQRHHRYMIYGKKQRYI 280
Query: 517 ELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA-----QVPVP 565
E+F+ + ++ VL + P +L S + L+H + VPVP
Sbjct: 281 EVFQCSGDDMNLVLTGAVTPPSTKALLSPGTLTTQSSATLTHPSTAAPVAVPVP 334
>gi|195334671|ref|XP_002034000.1| GM20128 [Drosophila sechellia]
gi|194125970|gb|EDW48013.1| GM20128 [Drosophila sechellia]
Length = 885
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 300 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 359
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 360 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 419
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 420 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKNYE---- 474
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 475 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 534
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 535 GTTKNCIRLRGLPYEAM 551
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RH+ M+
Sbjct: 549 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHHHYMM 608
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 609 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVSQP 641
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 40/164 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 273 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 325
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 326 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 370
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQ 602
AQV IR+RGLPY+A ++D F G
Sbjct: 371 AQV-----------------IIRMRGLPYDATAKQVLDFFTTGD 397
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 409 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 468
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 469 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 528
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 529 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 583
Query: 489 DAFVLFEKEEEADKALSK---HKESIG--IRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A + H G RYIE+F+ + ++ VLN + P
Sbjct: 584 EAFIQMDLEESARLCAQRRHHHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 637
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGAGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|195381217|ref|XP_002049351.1| GJ21539 [Drosophila virilis]
gi|194144148|gb|EDW60544.1| GJ21539 [Drosophila virilis]
Length = 982
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/256 (61%), Positives = 190/256 (74%), Gaps = 37/256 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVSQEHRDMALKRHKHHIGSRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CT KQV+DFF G E C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDCTPKQVLDFFTTG-EAPCHVLDGNEGVLFVKKPDGR 425
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E ++ KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PK + S+
Sbjct: 426 ATGDAFVLFANESDSSKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PK--TYESN 482
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ------------------------------HIITSG 575
N+G Q P+++ L + +P LPQ H+ITSG
Sbjct: 483 NHG---QPPLIAQLPTMQLPLLPQVGAAAGHALNPLTANASHANLCPQLTHAPQHLITSG 539
Query: 576 TRKDCIRLRGLPYEAL 591
T K+CIRLRGLPYEA+
Sbjct: 540 TTKNCIRLRGLPYEAM 555
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 88/128 (68%), Gaps = 22/128 (17%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMDSE SA L AQ +HN+ M+
Sbjct: 553 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMV 612
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV---------------GK-- 156
FGKK RYIEVFQCSG+DMN VLNG V PP P + + GK
Sbjct: 613 FGKKFRYIEVFQCSGDDMNHVLNGGLGSPVAPPPHPGHAHLAAAAAAAAAAAAAAAGKQP 672
Query: 157 TLLSPGML 164
+LLSPGML
Sbjct: 673 SLLSPGML 680
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 44/167 (26%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 279 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVSQE 331
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 332 HRDMALKRHKHHIGSRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 376
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI---LMDIFFVGQ 602
AQV IR+RGLPY+ C ++D F G+
Sbjct: 377 GAQV-----------------IIRMRGLPYD--CTPKQVLDFFTTGE 404
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL+YV+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGPGLGSDEKEIILLVYVLLEVATGQIIGTKQ 49
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 533 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 587
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + E+ A A KH + + RYIE+F+ + ++ VLN + P
Sbjct: 588 EAFIQMDSEDSARLCAQRKHNQFMVFGKKFRYIEVFQCSGDDMNHVLNGGLGSP 641
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 147/382 (38%), Gaps = 78/382 (20%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + + G+ +GEA I+ S+ +A + RH ++ RYIEV++ SGE
Sbjct: 303 NVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMALK-RHKHHI----GSRYIEVYRASGE 357
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL----------YPQHNTQINPGLS 184
D + G +S + ++ LP+ P P H N G+
Sbjct: 358 DFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDCTPKQVLDFFTTGEAPCHVLDGNEGVL 417
Query: 185 HL---------DPLV----NVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAALNK---P 228
+ D V ++AL + + + Q+ + L A+ LN+ P
Sbjct: 418 FVKKPDGRATGDAFVLFANESDSSKALGRHRESIGQR-YIELFRSTTAEVQQVLNRSMDP 476
Query: 229 HNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMN 288
N H PPL ++ T+ LP LP V + G
Sbjct: 477 KTYESNNHG-------------QPPLIAQLPTM--QLPLLPQVGAAAG------------ 509
Query: 289 TAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIW 348
H L P+ N + PQ L P H + T T N + L L
Sbjct: 510 --HALNPLTA----NASHANLCPQ-LTHAPQH-------LITSGTTKNCIRLRGLPYEAM 555
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEH-RDMALKRHKHHI---- 403
+ +L+ + + + + GV + ++A G+ +GEA ++ ++ R A ++H +
Sbjct: 556 VEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMVFGK 615
Query: 404 DKRYIEVTKANGEDFINVAGGN 425
RYIEV + +G+D +V G
Sbjct: 616 KFRYIEVFQCSGDDMNHVLNGG 637
>gi|307196545|gb|EFN78075.1| RNA-binding protein 35A [Harpegnathos saltator]
Length = 760
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/226 (67%), Positives = 183/226 (80%), Gaps = 15/226 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRFI++EHRDMALKRHKHH+ RYIEV KA+GEDF+ VAGG
Sbjct: 217 GGVALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGARYIEVYKASGEDFVGVAGGT 276
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA AFL+RGA+VI+RMRGLPY+C AKQV++FF +G + C+V+DGE+GVLFVKKPDG+
Sbjct: 277 SGEAHAFLSRGAEVIVRMRGLPYDCVAKQVLEFFLSG-QKPCHVLDGEDGVLFVKKPDGR 335
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF KEE+A KALSKH++ IG RYIELFRSTTAEVQQVLN+ ++ PK
Sbjct: 336 ATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLNRAID-PKQ------ 388
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
Q P + Q+P +PQHIIT GTRKDC+RLRGLPYEA+
Sbjct: 389 ----VVQPP--PRIVQLPS-IIPQHIITCGTRKDCVRLRGLPYEAV 427
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 75/86 (87%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHILEF+GE + NIV+QGVHMVYN+QGQPSGEAFIQMDSE SAY A RH+R MI
Sbjct: 425 EAVVEHILEFMGEHSKNIVFQGVHMVYNAQGQPSGEAFIQMDSEASAYACATQRHHRYMI 484
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVL 144
FGKKQRYIEVFQCSG+DM+LVL G +
Sbjct: 485 FGKKQRYIEVFQCSGDDMSLVLTGAV 510
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 40/170 (23%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 189 CVVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPMGRRNGEALVRFINKE 241
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK +G RYIE+++++ + V T LS
Sbjct: 242 HRDMALKRHKHHMGARYIEVYKASGEDFVGVAGGTS---------------GEAHAFLSR 286
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQDSFV 607
A+V +R+RGLPY+ + +++ F GQ+ V
Sbjct: 287 GAEV-----------------IVRMRGLPYDCVAKQVLEFFLSGQKPCHV 319
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G GV GR G+A V F +E AL +H+ I RYIE+ T A + +N
Sbjct: 322 GEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLN 381
Query: 421 VAGGNNNEAQA--------------FLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTEN 465
A Q +T G + +R+RGLPYE + +++F E+
Sbjct: 382 RAIDPKQVVQPPPRIVQLPSIIPQHIITCGTRKDCVRLRGLPYEAVVEHILEFM---GEH 438
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYIELFR 520
S N++ +GV V G+ +G+AF+ + E A ++ I RYIE+F+
Sbjct: 439 SKNIV--FQGVHMVYNAQGQPSGEAFIQMDSEASAYACATQRHHRYMIFGKKQRYIEVFQ 496
Query: 521 STTAEVQQVLN 531
+ ++ VL
Sbjct: 497 CSGDDMSLVLT 507
>gi|157129243|ref|XP_001655329.1| hypothetical protein AaeL_AAEL011420 [Aedes aegypti]
gi|108872264|gb|EAT36489.1| AAEL011420-PA [Aedes aegypti]
Length = 894
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/225 (70%), Positives = 186/225 (82%), Gaps = 10/225 (4%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF+ QEHRDMALKRHKHHI RYIEV +A GEDF+ VAGG
Sbjct: 294 GGVALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHIGNRYIEVYRATGEDFLAVAGGA 353
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV++FF G +N+C V+DG +G+LFVKKPDG+
Sbjct: 354 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLEFFANG-DNNCTVLDGADGILFVKKPDGR 412
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF +E +A KALSKH+ESIG RYIELFRSTTAEVQQVLN++M+ PK
Sbjct: 413 ATGDAFVLFSQETDAPKALSKHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKTYE---- 467
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
Q P+++ L V +P LPQH+ITSGT K+CIRLRGLPYEA
Sbjct: 468 ----PPQPPLIAALPPVQLPLLPQHVITSGTEKNCIRLRGLPYEA 508
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 94/118 (79%), Gaps = 7/118 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL FL +FA NIVYQGVH+VYN+QGQ +GEAFIQMDSE +AY +AQ +H++NM+FGK
Sbjct: 510 VEHILHFLEDFAKNIVYQGVHLVYNAQGQFNGEAFIQMDSETAAYQSAQQKHHKNMMFGK 569
Query: 122 KQRYIEVFQCSGEDMNLVLNGVL-PPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQ 178
KQRYIEVFQCSG+DMN+VLNG PPT+ + P LLSPGMLP + QP P N Q
Sbjct: 570 KQRYIEVFQCSGDDMNMVLNGGFQPPTNISKPP----LLSPGMLPTAQQP--PTQNQQ 621
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 39/162 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 266 CIVRARGLPWQSSDQDIARFFRG-----LNVAKG--GVALCLSPQGRRNGEALVRFVSQE 318
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R+T + L + + Q LS
Sbjct: 319 HRDMALKRHKHHIGNRYIEVYRATGEDF---------------LAVAGGASNEAQAFLSK 363
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
AQV IR+RGLPY+ + FF
Sbjct: 364 GAQV-----------------IIRMRGLPYDCTAKQVLEFFA 388
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F + AL +H+ I +RYIE+ ++ + V
Sbjct: 399 GADGILFVKKPDGRATGDAFVLFSQETDAPKALSKHRESIGQRYIELFRSTTAEVQQVLN 458
Query: 424 GNNN----------------------EAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFE 460
+ + Q +T G + IR+RGLPYE + ++ F E
Sbjct: 459 RSMDPKTYEPPQPPLIAALPPVQLPLLPQHVITSGTEKNCIRLRGLPYEAKVEHILHFLE 518
Query: 461 AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA-DKALSKHKESIGI----RY 515
+N +GV V G+ G+AF+ + E A A KH +++ RY
Sbjct: 519 DFAKNIVY-----QGVHLVYNAQGQFNGEAFIQMDSETAAYQSAQQKHHKNMMFGKKQRY 573
Query: 516 IELFRSTTAEVQQVLNKTMELPKNNS---LTSSNNGLSAQQP 554
IE+F+ + ++ VLN + P N S L S +AQQP
Sbjct: 574 IEVFQCSGDDMNMVLNGGFQPPTNISKPPLLSPGMLPTAQQP 615
>gi|321459051|gb|EFX70109.1| hypothetical protein DAPPUDRAFT_202511 [Daphnia pulex]
Length = 514
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/226 (68%), Positives = 182/226 (80%), Gaps = 13/226 (5%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRFI EHRDMALKRHKHHI +RYIEV KA GEDFI+VAGG
Sbjct: 202 GGVALCLSPQGRRNGEALVRFISPEHRDMALKRHKHHIGQRYIEVYKATGEDFIDVAGGI 261
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN-SCNVMDGEEGVLFVKKPDG 484
NNEAQ FL+R QVI+RMRGLPY+CTAKQV++FFE+G E+ V+DG+ GVLFVKK DG
Sbjct: 262 NNEAQNFLSRSGQVIVRMRGLPYDCTAKQVVEFFESGGEDVGSTVLDGDSGVLFVKKHDG 321
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTS 544
+ATGDAFV+F EEE KAL+KH++ IG RYIELFRSTTAEVQQVLN++M+ P+
Sbjct: 322 RATGDAFVMFATEEEGSKALAKHRDIIGSRYIELFRSTTAEVQQVLNRSMD-PRT----- 375
Query: 545 SNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
Q P++ L Q+P+ LPQ++ITSGTRKDCIRLRGLPYEA
Sbjct: 376 ----YETQAPLIPQLPQMPL--LPQNMITSGTRKDCIRLRGLPYEA 415
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 85/101 (84%), Gaps = 4/101 (3%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHILEFLGE A +IVYQGVHMVYN+QGQPSGEAFIQMDSE S++ AAQ RH+R M+FGK
Sbjct: 417 VEHILEFLGEHAKSIVYQGVHMVYNAQGQPSGEAFIQMDSEQSSFQAAQQRHHRYMVFGK 476
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLP-PTSPAISPVGKTLLSP 161
KQRYIEVFQCSGEDM++VL G L P++PA K LLSP
Sbjct: 477 KQRYIEVFQCSGEDMHVVLTGGLALPSTPATP---KALLSP 514
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV GR G+A V F +E AL +H+ I RYIE+ ++ + V
Sbjct: 309 GDSGVLFVKKHDGRATGDAFVMFATEEEGSKALAKHRDIIGSRYIELFRSTTAEVQQVLN 368
Query: 424 GNNN----EAQA---------------FLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGT 463
+ + E QA +T G + IR+RGLPYE + +++F
Sbjct: 369 RSMDPRTYETQAPLIPQLPQMPLLPQNMITSGTRKDCIRLRGLPYEAQVEHILEFL---G 425
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYIEL 518
E++ +++ +GV V G+ +G+AF+ + E+ + +A + + RYIE+
Sbjct: 426 EHAKSIV--YQGVHMVYNAQGQPSGEAFIQMDSEQSSFQAAQQRHHRYMVFGKKQRYIEV 483
Query: 519 FRSTTAEVQQVLNKTMELP 537
F+ + ++ VL + LP
Sbjct: 484 FQCSGEDMHVVLTGGLALP 502
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 40/169 (23%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ ++R RGLP++ + + + FF NV G GV P G+ G+A V F
Sbjct: 172 SNTVVRARGLPWQSSDQDIARFFRG-----LNVARG--GVALCLSPQGRRNGEALVRFIS 224
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E D AL +HK IG RYIE++++T + V NN Q L
Sbjct: 225 PEHRDMALKRHKHHIGQRYIEVYKATGEDFIDVAGGI-----NNEA----------QNFL 269
Query: 557 SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQD 604
S QV +R+RGLPY+ +++ F G +D
Sbjct: 270 SRSGQV-----------------IVRMRGLPYDCTAKQVVEFFESGGED 301
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + + QG+ +GEA ++ S +A + RH ++ QRYIEV++ +GE
Sbjct: 198 NVARGGVALCLSPQGRRNGEALVRFISPEHRDMALK-RHKHHI----GQRYIEVYKATGE 252
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHS 167
D V G+ +S G+ ++ LP+
Sbjct: 253 DFIDVAGGINNEAQNFLSRSGQVIVRMRGLPYD 285
>gi|195124401|ref|XP_002006681.1| GI18454 [Drosophila mojavensis]
gi|193911749|gb|EDW10616.1| GI18454 [Drosophila mojavensis]
Length = 1008
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 192/253 (75%), Gaps = 31/253 (12%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 330 GGVALCLSPLGRRNGEALIRFVSQEHRDMALKRHKHHIGSRYIEVYRASGEDFLAIAGGA 389
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CT KQV++FF G E+ C+V+DG EGVLFVKKPDG+
Sbjct: 390 SNEAQAFLSKGAQVIIRMRGLPYDCTPKQVLEFFTTG-ESPCHVLDGSEGVLFVKKPDGR 448
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E ++ KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PK + S+
Sbjct: 449 ATGDAFVLFANESDSPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PK--TYESN 505
Query: 546 NNG---LSAQQPM--LSHLAQV----------------------PVPYLPQHIITSGTRK 578
N+G L AQ P L L QV P+ + PQH+ITSGT K
Sbjct: 506 NHGQPPLIAQLPTMQLPLLPQVGAAAGHALNPLTANASHANLCPPLTHAPQHLITSGTTK 565
Query: 579 DCIRLRGLPYEAL 591
+CIRLRGLPYEA+
Sbjct: 566 NCIRLRGLPYEAM 578
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 89/125 (71%), Gaps = 19/125 (15%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMDSE SA L AQ +HN+ M+
Sbjct: 576 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMV 635
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV------------GK--TLL 159
FGKK RYIEVFQCSG+DMN VLNG V PP P+ + + GK +LL
Sbjct: 636 FGKKFRYIEVFQCSGDDMNHVLNGGLASPVAPPPHPSHAHLAAAAAAAAAAAAGKQPSLL 695
Query: 160 SPGML 164
SPGML
Sbjct: 696 SPGML 700
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 44/172 (25%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 302 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVSQE 354
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 355 HRDMALKRHKHHIGSRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 399
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI---LMDIFFVGQQDSFV 607
AQV IR+RGLPY+ C +++ F G+ V
Sbjct: 400 GAQV-----------------IIRMRGLPYD--CTPKQVLEFFTTGESPCHV 432
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 556 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHII-----YQGVHMVINAQGQPSG 610
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + E+ A A KH + + RYIE+F+ + ++ VLN + P
Sbjct: 611 EAFIQMDSEDSARLCAQRKHNQFMVFGKKFRYIEVFQCSGDDMNHVLNGGLASP 664
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIIL++YV+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGPGLGSDEKEIILMVYVLLEVATGQIIGTKQ 49
>gi|345495521|ref|XP_001604031.2| PREDICTED: RNA-binding protein fusilli-like [Nasonia vitripennis]
Length = 817
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/227 (68%), Positives = 181/227 (79%), Gaps = 18/227 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLSA GRRNGEA+VRF+ +EHRDMALKRHKHHID+RYIEV KA GEDF++VAGG
Sbjct: 278 GGVALCLSAQGRRNGEALVRFVSKEHRDMALKRHKHHIDQRYIEVYKALGEDFVSVAGGT 337
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
N EA AFL+RGAQVI+RMRGLPY+CTAKQV++FF G + C V+DGE+GVLFVKK DG+
Sbjct: 338 NGEAHAFLSRGAQVIVRMRGLPYDCTAKQVLEFFLTG-QKPCQVLDGEDGVLFVKKADGR 396
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF +EE+A KALSKH++ IG RYIELFRSTTAEVQQVLN+ ++
Sbjct: 397 ATGDAFVLFAQEEDAAKALSKHRDCIGSRYIELFRSTTAEVQQVLNRVSDI--------- 447
Query: 546 NNGLSAQQPMLSHLAQ-VPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
+P + Q +P LPQH ITSGTRKDC+RLRGLPYEAL
Sbjct: 448 -------KPFERTIMQPLPPLPLPQHFITSGTRKDCVRLRGLPYEAL 487
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ LVEHILEF+GE + NI YQGVHMV+N+QGQPSGEAFIQM+SE +AY+ A RH+R MI
Sbjct: 485 EALVEHILEFMGEHSKNIEYQGVHMVFNAQGQPSGEAFIQMNSEAAAYVCASQRHHRYMI 544
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGML 164
+GKKQRYIEVFQCSGEDMN+VL G P GK LLSPG L
Sbjct: 545 YGKKQRYIEVFQCSGEDMNMVLTGTHLP--------GKALLSPGSL 582
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 361 QVL-GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI 419
QVL G GV A GR G+A V F +E AL +H+ I RYIE+ ++ +
Sbjct: 379 QVLDGEDGVLFVKKADGRATGDAFVLFAQEEDAAKALSKHRDCIGSRYIELFRSTTAEVQ 438
Query: 420 NVAGGNNN----------------EAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAG 462
V ++ Q F+T G + +R+RGLPYE + +++F
Sbjct: 439 QVLNRVSDIKPFERTIMQPLPPLPLPQHFITSGTRKDCVRLRGLPYEALVEHILEFM--- 495
Query: 463 TENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYIE 517
E+S N+ +GV V G+ +G+AF+ E A S+ I RYIE
Sbjct: 496 GEHSKNIE--YQGVHMVFNAQGQPSGEAFIQMNSEAAAYVCASQRHHRYMIYGKKQRYIE 553
Query: 518 LFRSTTAEVQQVLNKTMELPKN-----NSLTSSNNG 548
+F+ + ++ VL T LP SLT++ G
Sbjct: 554 VFQCSGEDMNMVLTGT-HLPGKALLSPGSLTAAGGG 588
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ ++R RGLP++ + + V FF NV G GV G+ G+A V F
Sbjct: 248 SNCVVRARGLPWQSSDQDVAKFFRG-----LNVAKG--GVALCLSAQGRRNGEALVRFVS 300
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
+E D AL +HK I RYIE++++ + V T NG + L
Sbjct: 301 KEHRDMALKRHKHHIDQRYIEVYKALGEDFVSVAGGT-------------NGEA--HAFL 345
Query: 557 SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQ 603
S AQV +R+RGLPY+ +++ F GQ+
Sbjct: 346 SRGAQV-----------------IVRMRGLPYDCTAKQVLEFFLTGQK 376
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQY 50
P + +VATAGLQGN LGSDE+EI LL+YV+ID+ NKV+ QY
Sbjct: 10 PTHLVALYVATAGLQGNALGSDEEEITLLVYVLIDALQNKVMGRQQY 56
>gi|108743797|gb|ABG02207.1| IP16182p [Drosophila melanogaster]
Length = 694
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKN----YE 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 541
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 542 GTTKNCIRLRGLPYEAM 558
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 377
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 378 AQV-----------------IIRMRGLPYDATAKQVLDFFTTG 403
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA- 422
GV GR G+A V F ++ AL RH+ I +RYIE+ T A + +N +
Sbjct: 416 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 423 -------GGNNNE----------------------------------------------A 429
GG +++
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 535
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A A +H + RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|332029325|gb|EGI69308.1| RNA-binding protein fusilli [Acromyrmex echinatior]
Length = 677
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 180/226 (79%), Gaps = 15/226 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRFI++EHRDMALKRHKHH+ RYIEV KA+GEDFI VAGG
Sbjct: 217 GGVALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGARYIEVYKASGEDFIGVAGGT 276
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA AFL+RGAQVI+RMRGLPY+C AKQV++FF++G + C V+DGE+GVLFVKKPDG+
Sbjct: 277 SGEAHAFLSRGAQVIVRMRGLPYDCVAKQVLEFFQSG-QKPCQVLDGEDGVLFVKKPDGR 335
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF KEE+A KALSKH++ IG RYIELFRSTTAEVQQVLN+ + PK
Sbjct: 336 ATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLNRATD-PK------- 387
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
Q + P LPQHIITSGTRKDC+RLRGLPYEAL
Sbjct: 388 ------QVILPPPPIAQLPPLLPQHIITSGTRKDCVRLRGLPYEAL 427
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 6/110 (5%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ LVEHILEF+GE + NIVYQGVHMVYN+QGQPSGEAFIQMDSE SAY A RH+R MI
Sbjct: 425 EALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSEASAYACATQRHHRYMI 484
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+GKKQRYIEVFQCSG+DMNLVL G + P P K LLSPG L S
Sbjct: 485 YGKKQRYIEVFQCSGDDMNLVLTGAVTP------PSTKALLSPGTLTTQS 528
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 361 QVL-GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGE 416
QVL G GV GR G+A V F +E AL +H+ I RYIE+ T A +
Sbjct: 318 QVLDGEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQ 377
Query: 417 DFINVAGG--------------NNNEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEA 461
+N A Q +T G + +R+RGLPYE + +++F
Sbjct: 378 QVLNRATDPKQVILPPPPIAQLPPLLPQHIITSGTRKDCVRLRGLPYEALVEHILEFM-- 435
Query: 462 GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYI 516
E+S N++ +GV V G+ +G+AF+ + E A ++ I RYI
Sbjct: 436 -GEHSKNIV--YQGVHMVYNAQGQPSGEAFIQMDSEASAYACATQRHHRYMIYGKKQRYI 492
Query: 517 ELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP-MLSH 558
E+F+ + ++ VL + P +L S L+ Q P L+H
Sbjct: 493 EVFQCSGDDMNLVLTGAVTPPSTKALLSPGT-LTTQSPATLTH 534
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 40/166 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 189 CVVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPMGRRNGEALVRFINKE 241
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK +G RYIE+++++ + V T LS
Sbjct: 242 HRDMALKRHKHHMGARYIEVYKASGEDFIGVAGGTS---------------GEAHAFLSR 286
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQ 603
AQV V R+RGLPY+ + +++ F GQ+
Sbjct: 287 GAQVIV-----------------RMRGLPYDCVAKQVLEFFQSGQK 315
>gi|307181801|gb|EFN69244.1| RNA-binding protein 35A [Camponotus floridanus]
Length = 762
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/226 (68%), Positives = 180/226 (79%), Gaps = 15/226 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRFI++EHRDMALKRHKHH+ RYIEV KA+GEDF+ +AGG
Sbjct: 215 GGVALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGPRYIEVYKASGEDFVGIAGGT 274
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA AFL+RGAQVI+RMRGLPY+C AKQV++FF++G + C V+DGEEGVLFVKKPDG+
Sbjct: 275 SGEAHAFLSRGAQVIVRMRGLPYDCIAKQVLEFFQSG-QKPCQVLDGEEGVLFVKKPDGR 333
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF KEE+A KALSKH++ IG RYIELFRSTTAEVQQVLN+ + PK
Sbjct: 334 ATGDAFVLFAKEEDAVKALSKHRDLIGSRYIELFRSTTAEVQQVLNRATD-PK------- 385
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
Q + P LPQHIITSGTRKDC+RLRGLPYEAL
Sbjct: 386 ------QVILPPPPITQLPPLLPQHIITSGTRKDCVRLRGLPYEAL 425
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ LVEHILEF+GE + NIVYQGVHMVYN+QGQPSGEAFIQMDSE SAY A RH+R M
Sbjct: 423 EALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSEASAYACASQRHHRYMT 482
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGML 164
+GKKQRYIEVFQCSG+DMNLVL G + P P K LLSPG L
Sbjct: 483 YGKKQRYIEVFQCSGDDMNLVLTGAVTP------PSTKALLSPGTL 522
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 361 QVL-GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGE 416
QVL G GV GR G+A V F +E AL +H+ I RYIE+ T A +
Sbjct: 316 QVLDGEEGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDLIGSRYIELFRSTTAEVQ 375
Query: 417 DFINVAGGNNN--------------EAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEA 461
+N A Q +T G + +R+RGLPYE + +++F
Sbjct: 376 QVLNRATDPKQVILPPPPITQLPPLLPQHIITSGTRKDCVRLRGLPYEALVEHILEFM-- 433
Query: 462 GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALS-KHKESIGI----RYI 516
E+S N++ +GV V G+ +G+AF+ + E A S +H + RYI
Sbjct: 434 -GEHSKNIV--YQGVHMVYNAQGQPSGEAFIQMDSEASAYACASQRHHRYMTYGKKQRYI 490
Query: 517 ELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQ-----VPVP 565
E+F+ + ++ VL + P +L S + +H + VPVP
Sbjct: 491 EVFQCSGDDMNLVLTGAVTPPSTKALLSPGTLTTQTSATFTHPSAPTAMPVPVP 544
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 44/169 (26%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++R RGLP++ + + + FF NV G GV P G+ G+A V F +
Sbjct: 186 DCVVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPMGRRNGEALVRFINK 238
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
E D AL +HK +G RYIE+++++ + + T LS
Sbjct: 239 EHRDMALKRHKHHMGPRYIEVYKASGEDFVGIAGGTS---------------GEAHAFLS 283
Query: 558 HLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI---LMDIFFVGQQ 603
AQV +R+RGLPY+ CI +++ F GQ+
Sbjct: 284 RGAQV-----------------IVRMRGLPYD--CIAKQVLEFFQSGQK 313
>gi|383856881|ref|XP_003703935.1| PREDICTED: uncharacterized protein LOC100878893 [Megachile
rotundata]
Length = 1212
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/226 (68%), Positives = 180/226 (79%), Gaps = 15/226 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF+++EHRDMALKRHKHH+ RYIEV KA+GEDF+ VAGG
Sbjct: 781 GGVALCLSPMGRRNGEALVRFVNKEHRDMALKRHKHHMGGRYIEVYKASGEDFVGVAGGT 840
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA AFL+RGAQVI+RMRGLPY+C AKQV+DFF G + C+V+DGE+GVLFVKKPDG+
Sbjct: 841 SGEAHAFLSRGAQVIVRMRGLPYDCVAKQVLDFFLTG-QKPCHVLDGEDGVLFVKKPDGR 899
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF KEE+A KALSKH++ IG RYIELFRST AEVQQVLN+ ++ PK
Sbjct: 900 ATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTIAEVQQVLNRAID-PK------- 951
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
Q + + P LPQHIITSGTRKDC+RLRGLPYEAL
Sbjct: 952 ------QVVLPTPPIPQLPPILPQHIITSGTRKDCVRLRGLPYEAL 991
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 83/104 (79%), Gaps = 6/104 (5%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ LVEHILEF+GE + NIVYQGVHMVYN+QGQPSGEAFIQMDSE SAY A RH+R MI
Sbjct: 989 EALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSESSAYACASQRHHRYMI 1048
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPG 162
+GKKQRYIEVFQCSG+DMNLVL G + P P K LLSPG
Sbjct: 1049 YGKKQRYIEVFQCSGDDMNLVLTGAVTP------PSTKALLSPG 1086
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV GR G+A V F +E AL +H+ I RYIE+ ++ + V
Sbjct: 886 GEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTIAEVQQVLN 945
Query: 424 GNNNEAQA-----------------FLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTEN 465
+ Q +T G + +R+RGLPYE + +++F E+
Sbjct: 946 RAIDPKQVVLPTPPIPQLPPILPQHIITSGTRKDCVRLRGLPYEALVEHILEFM---GEH 1002
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYIELFR 520
S N++ +GV V G+ +G+AF+ + E A S+ I RYIE+F+
Sbjct: 1003 SKNIV--YQGVHMVYNAQGQPSGEAFIQMDSESSAYACASQRHHRYMIYGKKQRYIEVFQ 1060
Query: 521 STTAEVQQVLNKTMELPKNNSLTS 544
+ ++ VL + P +L S
Sbjct: 1061 CSGDDMNLVLTGAVTPPSTKALLS 1084
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 40/165 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 754 VVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPMGRRNGEALVRFVNKEH 806
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK +G RYIE+++++ + V T LS
Sbjct: 807 RDMALKRHKHHMGGRYIEVYKASGEDFVGVAGGTS---------------GEAHAFLSRG 851
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQ 603
AQV V R+RGLPY+ + ++D F GQ+
Sbjct: 852 AQVIV-----------------RMRGLPYDCVAKQVLDFFLTGQK 879
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQY 50
P + +VATAGLQGN LGSDE+EI LL+YV++D NKVL QY
Sbjct: 514 PTHLVALYVATAGLQGNALGSDEEEITLLVYVLLDVLQNKVLGRQQY 560
>gi|328779875|ref|XP_397080.4| PREDICTED: epithelial splicing regulatory protein 2 [Apis
mellifera]
Length = 1215
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/226 (67%), Positives = 180/226 (79%), Gaps = 15/226 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF+++EHRDMALKRHKHH+ RYIEV KA+GEDF+ VAGG
Sbjct: 784 GGVALCLSPMGRRNGEALVRFVNKEHRDMALKRHKHHMGGRYIEVYKASGEDFVGVAGGT 843
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA AFL+RGAQVI+RMRGLPY+C AKQV+ FF +G + C+V+DGE+GVLFVKKPDG+
Sbjct: 844 SGEAHAFLSRGAQVIVRMRGLPYDCVAKQVVXFFLSG-QKPCHVLDGEDGVLFVKKPDGR 902
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF KEE+A KALSKH++ IG RYIELFRST AEVQQVLN+ ++ PK
Sbjct: 903 ATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTIAEVQQVLNRAID-PK------- 954
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
Q + + P +PQHIITSGTRKDC+RLRGLPYEAL
Sbjct: 955 ------QVVLPTPPIPQLPPIVPQHIITSGTRKDCVRLRGLPYEAL 994
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 83/104 (79%), Gaps = 6/104 (5%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ LVEHILEF+GE + NIVYQGVHMVYN+QGQPSGEAFIQMDSE SAY A RH+R MI
Sbjct: 992 EALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSESSAYACASQRHHRYMI 1051
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPG 162
+GKKQRYIEVFQCSG+DMNLVL G + P P K LLSPG
Sbjct: 1052 YGKKQRYIEVFQCSGDDMNLVLTGAVTP------PSTKALLSPG 1089
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G GV GR G+A V F +E AL +H+ I RYIE+ T A + +N
Sbjct: 889 GEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTIAEVQQVLN 948
Query: 421 VA--------------GGNNNEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTEN 465
A Q +T G + +R+RGLPYE + +++F E+
Sbjct: 949 RAIDPKQVVLPTPPIPQLPPIVPQHIITSGTRKDCVRLRGLPYEALVEHILEFM---GEH 1005
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI-----RYIELFR 520
S N++ +GV V G+ +G+AF+ + E A S+ I RYIE+F+
Sbjct: 1006 SKNIV--YQGVHMVYNAQGQPSGEAFIQMDSESSAYACASQRHHRYMIYGKKQRYIEVFQ 1063
Query: 521 STTAEVQQVLNKTMELPKNNSLTS 544
+ ++ VL + P +L S
Sbjct: 1064 CSGDDMNLVLTGAVTPPSTKALLS 1087
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF NV G GV P G+ G+A V F +E
Sbjct: 757 VVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPMGRRNGEALVRFVNKEH 809
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK +G RYIE+++++ + V T LS
Sbjct: 810 RDMALKRHKHHMGGRYIEVYKASGEDFVGVAGGTS---------------GEAHAFLSRG 854
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ 603
AQV V R+RGLPY+ + + FF+ Q
Sbjct: 855 AQVIV-----------------RMRGLPYDCVAKQVVXFFLSGQ 881
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQY 50
P + +VATAGLQGN LGSDE+EI LL+YV+ID NKVL QY
Sbjct: 517 PTHLVALYVATAGLQGNALGSDEEEITLLVYVLIDVLQNKVLGRQQY 563
>gi|270009942|gb|EFA06390.1| hypothetical protein TcasGA2_TC009268 [Tribolium castaneum]
Length = 751
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 179/225 (79%), Gaps = 14/225 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLSA GRRNGEA+++F QEHRDMALKRHKHHI RYIEV +A+GEDF++VAGG
Sbjct: 254 GGVALCLSAQGRRNGEALIKFESQEHRDMALKRHKHHIGPRYIEVYRASGEDFLSVAGGK 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++EAQAFL+RGA VI+RMRGLPY+CTAKQV+DFF +G ENSC V+DG EGVLFV+KPDG+
Sbjct: 314 SSEAQAFLSRGAAVIVRMRGLPYDCTAKQVLDFFASG-ENSCTVLDGTEGVLFVRKPDGR 372
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KALSKH+E IG RYIELFRSTTAEVQQVLN+++E
Sbjct: 373 ATGDAFVLFASESDAPKALSKHRECIGSRYIELFRSTTAEVQQVLNRSLE---------- 422
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+P +P LPQH ITSGT+K+CIRLRGLPYEA
Sbjct: 423 ---ARTYEPEPLPPLLPHMPLLPQHYITSGTKKECIRLRGLPYEA 464
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 133/226 (58%), Gaps = 42/226 (18%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHILEFLGE+A NI++QGVHMVYN+QGQPSGEAFIQMDSE SA + AQ +H+R M FGK
Sbjct: 466 VEHILEFLGEYAKNIIFQGVHMVYNAQGQPSGEAFIQMDSEQSACITAQQKHHRYMTFGK 525
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLP-PTSPAISPVGKTLLSPGMLPHSSQPLYPQHN---- 176
KQRYIEVFQCSGEDMNLVL G +P P SPA + LLSPGMLP +
Sbjct: 526 KQRYIEVFQCSGEDMNLVLTGGIPAPVSPAKAT--PALLSPGMLPSIAPLPPTNIPPPPP 583
Query: 177 -----TQINPGLSHLD-------------PLVNVHLTQALAQAQYAKSQQDNLMLMNQIA 218
QI+P +++ D N+ Q AQA Q+ ++LMNQIA
Sbjct: 584 PNTSVNQISPNITNWDNQALFAQQQAQIIAQQNLIARQNQAQA------QNEMLLMNQIA 637
Query: 219 AQQMAALNK---------PHNMALNG-HTPTLIPAPSPNALMPPPL 254
+A LN+ P+++ N P LI P P ++PP +
Sbjct: 638 QHNLAVLNQNVGPVSPNSPNSVLKNTPMMPHLIAQP-PFVMLPPRM 682
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKVLVE 63
P + CV +VATAGLQG+L+GSDEQE++LLIYVI+D NK++ QY PI+ + E
Sbjct: 4 PHHVCVLYVATAGLQGSLMGSDEQEVVLLIYVIVDVVQNKIVGVQQY--PIRPQTADINE 61
Query: 64 HIL 66
+IL
Sbjct: 62 NIL 64
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 39/169 (23%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ ++R RGLP++ + + + FF + NV G GV G+ G+A + FE
Sbjct: 224 SNCVVRARGLPWQSSDQDIAKFF-----SGLNVAKG--GVALCLSAQGRRNGEALIKFES 276
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
+E D AL +HK IG RYIE++R++ + L+ + S Q L
Sbjct: 277 QEHRDMALKRHKHHIGPRYIEVYRASGEDF---------------LSVAGGKSSEAQAFL 321
Query: 557 SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQDS 605
S A V +R+RGLPY+ + FF ++S
Sbjct: 322 SRGAAV-----------------IVRMRGLPYDCTAKQVLDFFASGENS 353
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV GR G+A V F + AL +H+ I RYIE+ ++ + V
Sbjct: 359 GTEGVLFVRKPDGRATGDAFVLFASESDAPKALSKHRECIGSRYIELFRSTTAEVQQVLN 418
Query: 424 GN------------------NNEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTE 464
+ Q ++T G + IR+RGLPYE + +++F E
Sbjct: 419 RSLEARTYEPEPLPPLLPHMPLLPQHYITSGTKKECIRLRGLPYEAQVEHILEFL---GE 475
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSKHKESIGI----RYIELF 519
+ N++ +GV V G+ +G+AF+ + E+ A A KH + RYIE+F
Sbjct: 476 YAKNIIF--QGVHMVYNAQGQPSGEAFIQMDSEQSACITAQQKHHRYMTFGKKQRYIEVF 533
Query: 520 RSTTAEVQQVLNKTMELP 537
+ + ++ VL + P
Sbjct: 534 QCSGEDMNLVLTGGIPAP 551
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + ++QG+ +GEA I+ +S+ +A + RH ++ RYIEV++ SGE
Sbjct: 250 NVAKGGVALCLSAQGRRNGEALIKFESQEHRDMALK-RHKHHI----GPRYIEVYRASGE 304
Query: 135 DMNLVLNG 142
D V G
Sbjct: 305 DFLSVAGG 312
>gi|189238842|ref|XP_970801.2| PREDICTED: similar to fusilli CG8205-PD [Tribolium castaneum]
Length = 683
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/225 (66%), Positives = 173/225 (76%), Gaps = 14/225 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLSA GRRNGEA+++F QEHRDMALKRHKHHI RYIEV +A+GEDF++VAGG
Sbjct: 254 GGVALCLSAQGRRNGEALIKFESQEHRDMALKRHKHHIGPRYIEVYRASGEDFLSVAGGK 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++EAQAFL+RGA VI+RMRGLPY+CTAKQV+DFF +G ENSC V+DG EGVLFV+KPDG+
Sbjct: 314 SSEAQAFLSRGAAVIVRMRGLPYDCTAKQVLDFFASG-ENSCTVLDGTEGVLFVRKPDGR 372
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KALSKH+E IG RYIELFRSTTAEVQQVLN+++E
Sbjct: 373 ATGDAFVLFASESDAPKALSKHRECIGSRYIELFRSTTAEVQQVLNRSLEARTYEPEPLP 432
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
QH ITSGT+K+CIRLRGLPYEA
Sbjct: 433 PLLPHMPLLP-------------QHYITSGTKKECIRLRGLPYEA 464
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 3/102 (2%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHILEFLGE+A NI++QGVHMVYN+QGQPSGEAFIQMDSE SA + AQ +H+R M FGK
Sbjct: 466 VEHILEFLGEYAKNIIFQGVHMVYNAQGQPSGEAFIQMDSEQSACITAQQKHHRYMTFGK 525
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLP-PTSPAISPVGKTLLSPG 162
KQRYIEVFQCSGEDMNLVL G +P P SPA + LLSPG
Sbjct: 526 KQRYIEVFQCSGEDMNLVLTGGIPAPVSPAKA--TPALLSPG 565
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKVLVE 63
P + CV +VATAGLQG+L+GSDEQE++LLIYVI+D NK++ QY PI+ + E
Sbjct: 4 PHHVCVLYVATAGLQGSLMGSDEQEVVLLIYVIVDVVQNKIVGVQQY--PIRPQTADINE 61
Query: 64 HIL 66
+IL
Sbjct: 62 NIL 64
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 39/169 (23%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ ++R RGLP++ + + + FF + NV G GV G+ G+A + FE
Sbjct: 224 SNCVVRARGLPWQSSDQDIAKFF-----SGLNVAKG--GVALCLSAQGRRNGEALIKFES 276
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
+E D AL +HK IG RYIE++R++ + L+ + S Q L
Sbjct: 277 QEHRDMALKRHKHHIGPRYIEVYRASGEDF---------------LSVAGGKSSEAQAFL 321
Query: 557 SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQDS 605
S A V +R+RGLPY+ + FF ++S
Sbjct: 322 SRGAAV-----------------IVRMRGLPYDCTAKQVLDFFASGENS 353
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV GR G+A V F + AL +H+ I RYIE+ ++ + V
Sbjct: 359 GTEGVLFVRKPDGRATGDAFVLFASESDAPKALSKHRECIGSRYIELFRSTTAEVQQVLN 418
Query: 424 GN------------------NNEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTE 464
+ Q ++T G + IR+RGLPYE + +++F E
Sbjct: 419 RSLEARTYEPEPLPPLLPHMPLLPQHYITSGTKKECIRLRGLPYEAQVEHILEFL---GE 475
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSKHKESIGI----RYIELF 519
+ N++ +GV V G+ +G+AF+ + E+ A A KH + RYIE+F
Sbjct: 476 YAKNIIF--QGVHMVYNAQGQPSGEAFIQMDSEQSACITAQQKHHRYMTFGKKQRYIEVF 533
Query: 520 RSTTAEVQQVLNKTMELP 537
+ + ++ VL + P
Sbjct: 534 QCSGEDMNLVLTGGIPAP 551
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + ++QG+ +GEA I+ +S+ +A + RH ++ RYIEV++ SGE
Sbjct: 250 NVAKGGVALCLSAQGRRNGEALIKFESQEHRDMALK-RHKHHI----GPRYIEVYRASGE 304
Query: 135 DMNLVLNG 142
D V G
Sbjct: 305 DFLSVAGG 312
>gi|242017929|ref|XP_002429436.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514368|gb|EEB16698.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 766
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/225 (65%), Positives = 171/225 (76%), Gaps = 10/225 (4%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF++Q HRDMALKRHKHH+ +RYIEV K+ GE+F+ VAGG+
Sbjct: 222 GGVALCLSPAGRRNGEALVRFVNQAHRDMALKRHKHHMGQRYIEVYKSTGEEFVFVAGGS 281
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA FLTRG QVIIRMRGLPYECTA+QV++FF G N+C V+DGE+GVLFVKK DG+
Sbjct: 282 STEAHNFLTRGGQVIIRMRGLPYECTAEQVLEFFRTGENNTCEVLDGEDGVLFVKKSDGR 341
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KALSKH+E IG RYIELFRSTTAEVQQVLN+ E PK +
Sbjct: 342 ATGDAFVLFSNESDAPKALSKHRERIGSRYIELFRSTTAEVQQVLNRAQEDPKPVPVQLP 401
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ L PQ +ITSGT K+CIRLRGLPYEA
Sbjct: 402 PQLPTPLPTTL----------YPQQLITSGTSKNCIRLRGLPYEA 436
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 37/165 (22%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL+FLG++A NIV+QGVHMVYNS GQPSGEAFIQMDSE SA+ AA RH++ MIFGK
Sbjct: 438 VEHILDFLGDYAKNIVFQGVHMVYNSHGQPSGEAFIQMDSEASAFHAANHRHHQYMIFGK 497
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQINP 181
KQRY+EVFQCSG+DMN +L G +SP ++LS G+ ++N
Sbjct: 498 KQRYVEVFQCSGDDMNSILTG------GQVSPKATSVLSSGI----------ENNM---- 537
Query: 182 GLSHLDPLVNVHLTQALAQAQYAKSQ-----------QDNLMLMN 215
P V + + + + Y Q N+ L+N
Sbjct: 538 ------PGVGLTVASTILPSYYEPPQVPILPALNIPPHPNVFLLN 576
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 40/244 (16%)
Query: 360 EQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGE 416
E + G GV + GR G+A V F ++ AL +H+ I RYIE+ T A +
Sbjct: 324 EVLDGEDGVLFVKKSDGRATGDAFVLFSNESDAPKALSKHRERIGSRYIELFRSTTAEVQ 383
Query: 417 DFINVAGGNNNEA------------------QAFLTRG-AQVIIRMRGLPYECTAKQVID 457
+N A + Q +T G ++ IR+RGLPYE + ++D
Sbjct: 384 QVLNRAQEDPKPVPVQLPPQLPTPLPTTLYPQQLITSGTSKNCIRLRGLPYEAQVEHILD 443
Query: 458 FFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI---- 513
F +N +GV V G+ +G+AF+ + E A A + I
Sbjct: 444 FLGDYAKNIVF-----QGVHMVYNSHGQPSGEAFIQMDSEASAFHAANHRHHQYMIFGKK 498
Query: 514 -RYIELFRSTTAEVQQVLNKTMELPKNNSLTSS---NN----GLSAQQPMLSHLAQVP-V 564
RY+E+F+ + ++ +L PK S+ SS NN GL+ +L + P V
Sbjct: 499 QRYVEVFQCSGDDMNSILTGGQVSPKATSVLSSGIENNMPGVGLTVASTILPSYYEPPQV 558
Query: 565 PYLP 568
P LP
Sbjct: 559 PILP 562
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 40/167 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + FF N+ G GV P G+ G+A V F +
Sbjct: 195 VVRARGLPWQSSDGDIARFFRG-----LNIEKG--GVALCLSPAGRRNGEALVRFVNQAH 247
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK +G RYIE+++ST E V S T ++N L+
Sbjct: 248 RDMALKRHKHHMGQRYIEVYKSTGEEFVFV--------AGGSSTEAHN-------FLTRG 292
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQDS 605
QV IR+RGLPYE +++ F G+ ++
Sbjct: 293 GQV-----------------IIRMRGLPYECTAEQVLEFFRTGENNT 322
>gi|328707990|ref|XP_001948909.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 571
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 146/239 (61%), Positives = 176/239 (73%), Gaps = 9/239 (3%)
Query: 360 EQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI 419
+ ++ +GGV LCLSA GR NGEA+VRF++QEHRDMA KRH HHI RYIEV KANGEDFI
Sbjct: 10 KHIICVGGVTLCLSAHGRCNGEAVVRFVNQEHRDMATKRHNHHIGSRYIEVYKANGEDFI 69
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
NVAGGN++E + FL +GA I+RMRGLPY CTAK VI FFE G E + +VM GEEGVLFV
Sbjct: 70 NVAGGNSSEVETFLAKGAHAIVRMRGLPYYCTAKDVITFFENG-EQTSSVMYGEEGVLFV 128
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKN 539
KKPDG+ATG AFVLF E++A KALSKH++ +G RYIEL R T AEVQQ LN+ M+
Sbjct: 129 KKPDGRATGYAFVLFADEDDACKALSKHRDLMGTRYIELIRCTKAEVQQFLNRGMDQSVR 188
Query: 540 NSLTSSNNGLS--------AQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
++ + S ++ + L VP+ LPQH+ITSG RKDCIRLRGLPYEA
Sbjct: 189 STASDSIGNITIPVTTTAGVNNSPTALLGHVPLLPLPQHVITSGIRKDCIRLRGLPYEA 247
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 136/271 (50%), Gaps = 34/271 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL+FLGE + NIV+ GVH+VYNS G SGEAFIQM++E SA A ++++ + FGK
Sbjct: 249 VEHILKFLGEHSKNIVFHGVHIVYNSVGHASGEAFIQMNNEGSAAQAVMAKNHKYISFGK 308
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLS-PGMLPHSSQPLYPQH---NT 177
K+RYI++FQCSGEDM+LVL G + LLS PGM P QH +
Sbjct: 309 KRRYIKLFQCSGEDMHLVLTGGGAASRGLSLVADNALLSPPGMSP-------IQHLMTTS 361
Query: 178 QI-NPG------LSHLDPLV----NVHLTQALAQAQYAKSQQDNLM--LMNQIAAQQMAA 224
Q+ N G + DP+ N+ TQAL +A A +QQ++ + L A+
Sbjct: 362 QVANTGIPVPTLMPAWDPMSVYAQNLAQTQALQRATVAAAQQESWLYQLTQHNNLINPAS 421
Query: 225 LNKPHNMALNG---HTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQF 281
L K +NG P + SPNA NS I + PA P + YF
Sbjct: 422 LTK-QQQDMNGGIAQQPNIQSILSPNAAHHLLDNSAQNYIAKS-PASPFL-----YFNMP 474
Query: 282 QLPINMNTAHLLQPMNTPFFFNMPRMPVTPQ 312
Q P NM + T F MP M + Q
Sbjct: 475 QFPHNMAAKPYVPISATGGQFVMPPMAYSQQ 505
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 50/234 (21%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDF 418
+ G GV GR G A V F D++ AL +H+ + RYIE+ TKA + F
Sbjct: 119 MYGEEGVLFVKKPDGRATGYAFVLFADEDDACKALSKHRDLMGTRYIELIRCTKAEVQQF 178
Query: 419 IN------------------------VAGGNNNEA------------QAFLTRGAQV-II 441
+N AG NN+ Q +T G + I
Sbjct: 179 LNRGMDQSVRSTASDSIGNITIPVTTTAGVNNSPTALLGHVPLLPLPQHVITSGIRKDCI 238
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
R+RGLPYE + ++ F E+S N++ GV V G A+G+AF+ E A
Sbjct: 239 RLRGLPYEANVEHILKFL---GEHSKNIV--FHGVHIVYNSVGHASGEAFIQMNNEGSAA 293
Query: 502 KA-LSKHKESIGI----RYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLS 550
+A ++K+ + I RYI+LF+ + ++ VL + SL + N LS
Sbjct: 294 QAVMAKNHKYISFGKKRRYIKLFQCSGEDMHLVLTGGGAASRGLSLVADNALLS 347
>gi|195171791|ref|XP_002026687.1| GL11864 [Drosophila persimilis]
gi|194111613|gb|EDW33656.1| GL11864 [Drosophila persimilis]
Length = 830
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/226 (63%), Positives = 165/226 (73%), Gaps = 40/226 (17%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 326 GGVALCLSPLGRRNGEALIRFVSQEHRDMALKRHKHHIGARYIEVYRASGEDFLAIAGGA 385
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+CTAKQV++FF G E C+V+D EGVLFVKKPDG+
Sbjct: 386 SNEAQAFLSKGAQVIIRMRGLPYDCTAKQVLEFFTTG-EAPCHVLDASEGVLFVKKPDGR 444
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVL
Sbjct: 445 ATGDAFVLFANEGDAPKALGRHRESIGQRYIELFRSTTAEVQQVL--------------- 489
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
H+ITSGT K+CIRLRGLPYEA+
Sbjct: 490 ------------------------HLITSGTTKNCIRLRGLPYEAM 511
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 70/81 (86%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMDSE SA L AQ +HN+ M+
Sbjct: 509 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDSEDSARLCAQRKHNQFMV 568
Query: 119 FGKKQRYIEVFQCSGEDMNLV 139
FGKK RYIEVFQCSG+DMN+V
Sbjct: 569 FGKKFRYIEVFQCSGDDMNMV 589
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 40/165 (24%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 298 CIVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVSQE 350
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 351 HRDMALKRHKHHIGARYIEVYRASGEDF---------------LAIAGGASNEAQAFLSK 395
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQ 602
AQV IR+RGLPY+ +++ F G+
Sbjct: 396 GAQV-----------------IIRMRGLPYDCTAKQVLEFFTTGE 423
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 434 GVLFVKKPDGRATGDAFVLFANEGDAPKALGRHRESIGQRYIELFRSTTAEVQQVL---- 489
Query: 427 NEAQAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+T G + IR+RGLPYE + ++ F + ++ +GV V G+
Sbjct: 490 ----HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQ 540
Query: 486 ATGDAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELPKNN 540
+G+AF+ + E+ A A KH + + RYIE+F+ + ++ V + L +
Sbjct: 541 PSGEAFIQMDSEDSARLCAQRKHNQFMVFGKKFRYIEVFQCSGDDMNMVGQRRTGLARAT 600
Query: 541 SL 542
L
Sbjct: 601 VL 602
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGPGLGSDEKEIILLVFVLLEVATGQIIGTKQ 49
>gi|405968884|gb|EKC33911.1| Epithelial splicing regulatory protein 2 [Crassostrea gigas]
Length = 727
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 186/244 (76%), Gaps = 12/244 (4%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VR ++++RD+ALKRHKHHI +RYIEV KA G+DF+NVAGG+
Sbjct: 252 GGVALCLSPQGRRNGEALVRLENEQNRDLALKRHKHHIGQRYIEVYKATGKDFVNVAGGS 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
N+EAQAFL+RG QVIIRMRGLP+ TA+QV++FF E S +V+DGEEG+LFV PDG+
Sbjct: 312 NSEAQAFLSRGGQVIIRMRGLPFTATAQQVLEFF--AREPSVSVLDGEEGILFVHYPDGR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
+TGDAFVL EE+A AL KH+E +G RYIELF+STTAEVQQVLN++M+ P+N
Sbjct: 370 STGDAFVLLASEEDAVSALKKHREIMGTRYIELFKSTTAEVQQVLNRSMD-PRNPE--PQ 426
Query: 546 NNGLSAQQPMLSHLA-QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQ 603
L A +L+ L Q +PY+PQ +ITSGTR+DCIRLR +P A + DI F+G+
Sbjct: 427 ETPLPA---ILTQLTPQSQLPYIPQSLITSGTRRDCIRLRNIPGGAQ--VTDILTFLGEF 481
Query: 604 DSFV 607
F+
Sbjct: 482 SQFI 485
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 11/145 (7%)
Query: 40 YVNKVLITSQYKEPIQGFKKV----LVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEA 95
Y+ + LITS + + + V IL FLGEF+ I++QGVHMVY +QG+PSGEA
Sbjct: 445 YIPQSLITSGTRRDCIRLRNIPGGAQVTDILTFLGEFSQFIIFQGVHMVYTAQGEPSGEA 504
Query: 96 FIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTS----PAI 151
FIQMDSE SA L A R+ R ++F +K+R I+V QCSGEDMNLVL +P TS P I
Sbjct: 505 FIQMDSEESAQLTAINRNKRPIVFAQKKRIIDVIQCSGEDMNLVLTNGIPTTSIPSPPQI 564
Query: 152 SPVGKTLLS---PGMLPHSSQPLYP 173
+ + +LS P ++P S L P
Sbjct: 565 PFIQRPILSQAAPTLIPTSLPSLQP 589
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 39/160 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G GV P G+ G+A V E E+
Sbjct: 225 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLSPQGRRNGEALVRLENEQN 277
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++++T + V SN S Q LS
Sbjct: 278 RDLALKRHKHHIGQRYIEVYKATGKDFVNVAG------------GSN---SEAQAFLSRG 322
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
QV IR+RGLP+ A + FF
Sbjct: 323 GQV-----------------IIRMRGLPFTATAQQVLEFF 345
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 165/401 (41%), Gaps = 68/401 (16%)
Query: 63 EHILEFLGEFASNIVY---QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
+ +LEF S V +G+ V+ G+ +G+AF+ + SE A A L+ +R ++
Sbjct: 339 QQVLEFFAREPSVSVLDGEEGILFVHYPDGRSTGDAFVLLASEEDAVSA--LKKHREIM- 395
Query: 120 GKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQH---- 175
RYIE+F+ + ++ VLN + P +P + + P S P PQ
Sbjct: 396 --GTRYIELFKSTTAEVQQVLNRSMDPRNPEPQETPLPAILTQLTPQSQLPYIPQSLITS 453
Query: 176 --------------NTQINPGLSHLDPLVNVHLTQALAQAQYAKSQ--QDNLMLMNQIAA 219
Q+ L+ L + Q + A+ + + + M+ +
Sbjct: 454 GTRRDCIRLRNIPGGAQVTDILTFLGEFSQFIIFQGVHMVYTAQGEPSGEAFIQMDSEES 513
Query: 220 QQMAALNK----------------------PHNMAL-NGHTPTLIPAPSPNALMPPPLNS 256
Q+ A+N+ N+ L NG T IP+P + P+ S
Sbjct: 514 AQLTAINRNKRPIVFAQKKRIIDVIQCSGEDMNLVLTNGIPTTSIPSPPQIPFIQRPILS 573
Query: 257 KS--TTIPTNLPAL-PAVPTSGGYFPQFQLPINMNTAHLLQP--MNTPFFFNMPRMPVTP 311
++ T IPT+LP+L PA P LP ++ TA QP M+ P PR P
Sbjct: 574 QAAPTLIPTSLPSLQPAT------LPIAHLPQHLQTA-AFQPTMMSAPLAAAAPRPAYFP 626
Query: 312 QVLPKFPVHQLNQTPTVYTIPT-PGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVAL 370
Q++ +P + +P Y T P V + L N + +LN G+ +V + +
Sbjct: 627 QIVYWYPSPPI--SPQTYVTHTGPPTLVVMRGLPVNAQVQDILNFFQGFPEVTP-ENIQI 683
Query: 371 CLSAFGRRNGEAIVRFIDQEHRDMAL-KRHKHHIDKRYIEV 410
+ GR G+A++ F+ + + A+ R K + + IE+
Sbjct: 684 QILPDGRLTGDALISFMTRSEAERAIATRGKQTMGQCLIEL 724
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 430 QAFLTR-GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q ++T G ++ MRGLP + +++FF+ E + E + PDG+ TG
Sbjct: 640 QTYVTHTGPPTLVVMRGLPVNAQVQDILNFFQGFPEVT------PENIQIQILPDGRLTG 693
Query: 489 DAFVLFEKEEEADKAL-SKHKESIGIRYIELF 519
DA + F EA++A+ ++ K+++G IELF
Sbjct: 694 DALISFMTRSEAERAIATRGKQTMGQCLIELF 725
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 54/246 (21%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAGGNNNEA--- 429
GR G+A V +E ALK+H+ + RYIE+ T A + +N + N
Sbjct: 368 GRSTGDAFVLLASEEDAVSALKKHREIMGTRYIELFKSTTAEVQQVLNRSMDPRNPEPQE 427
Query: 430 --------------------QAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTENSCN 468
Q+ +T G + IR+R +P QV D E S
Sbjct: 428 TPLPAILTQLTPQSQLPYIPQSLITSGTRRDCIRLRNIP---GGAQVTDILTFLGEFSQF 484
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSKHKESIGI----RYIELFRSTT 523
++ +GV V G+ +G+AF+ + EE A A++++K I R I++ + +
Sbjct: 485 II--FQGVHMVYTAQGEPSGEAFIQMDSEESAQLTAINRNKRPIVFAQKKRIIDVIQCSG 542
Query: 524 AEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL--------------AQVPVPYLPQ 569
++ VL + S+ S Q+P+LS A +P+ +LPQ
Sbjct: 543 EDMNLVLTNGI---PTTSIPSPPQIPFIQRPILSQAAPTLIPTSLPSLQPATLPIAHLPQ 599
Query: 570 HIITSG 575
H+ T+
Sbjct: 600 HLQTAA 605
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + + QG+ +GEA +++++E + LA + RH ++ QRYIEV++ +G+
Sbjct: 248 NIAKGGVALCLSPQGRRNGEALVRLENEQNRDLALK-RHKHHI----GQRYIEVYKATGK 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D V G +S G+ ++ LP ++
Sbjct: 303 DFVNVAGGSNSEAQAFLSRGGQVIIRMRGLPFTA 336
>gi|386768028|ref|NP_001246347.1| fusilli, isoform H [Drosophila melanogaster]
gi|383302505|gb|AFH08101.1| fusilli, isoform H [Drosophila melanogaster]
Length = 526
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/198 (67%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
Query: 394 MALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAK 453
MALKRHKHHI RYIEV +A+GEDF+ +AGG +NEAQAFL++GAQVIIRMRGLPY+ TAK
Sbjct: 1 MALKRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAK 60
Query: 454 QVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI 513
QV+DFF G C+V+DG EGVLFVKKPDG+ATGDAFVLF E +A KAL +H+ESIG
Sbjct: 61 QVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQ 120
Query: 514 RYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIIT 573
RYIELFRSTTAEVQQVLN++M+ PKN + G +Q P+++ L + +P LPQH+IT
Sbjct: 121 RYIELFRSTTAEVQQVLNRSMD-PKNY----ESGGGHSQPPLIAQLPTMQLPLLPQHLIT 175
Query: 574 SGTRKDCIRLRGLPYEAL 591
SGT K+CIRLRGLPYEA+
Sbjct: 176 SGTTKNCIRLRGLPYEAM 193
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 191 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 250
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 251 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 283
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 82 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 141
Query: 422 ------AGGNNNE---------------AQAFLTRG-AQVIIRMRGLPYECTAKQVIDFF 459
+GG +++ Q +T G + IR+RGLPYE + ++ F
Sbjct: 142 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQHLITSGTTKNCIRLRGLPYEAMVEHILHFL 201
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSKHKESI----GIR 514
+ ++ +GV V G+ +G+AF+ + EE A A +H + R
Sbjct: 202 DDFAKHII-----YQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYR 256
Query: 515 YIELFRSTTAEVQQVLNKTMELP 537
YIE+F+ + ++ VLN + P
Sbjct: 257 YIEVFQCSGDDMNMVLNGGLASP 279
>gi|24653910|ref|NP_725483.1| fusilli, isoform B [Drosophila melanogaster]
gi|21645398|gb|AAM70984.1| fusilli, isoform B [Drosophila melanogaster]
gi|27820059|gb|AAO25059.1| GH20047p [Drosophila melanogaster]
gi|71834259|gb|AAZ41802.1| GH11127p [Drosophila melanogaster]
gi|220947106|gb|ACL86096.1| fus-PB [synthetic construct]
Length = 633
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 162/229 (70%), Gaps = 36/229 (15%)
Query: 394 MALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAK 453
MALKRHKHHI RYIEV +A+GEDF+ +AGG +NEAQAFL++GAQVIIRMRGLPY+ TAK
Sbjct: 1 MALKRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAK 60
Query: 454 QVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI 513
QV+DFF G C+V+DG EGVLFVKKPDG+ATGDAFVLF E +A KAL +H+ESIG
Sbjct: 61 QVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQ 120
Query: 514 RYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQ---- 569
RYIELFRSTTAEVQQVLN++M+ PKN + G +Q P+++ L + +P LPQ
Sbjct: 121 RYIELFRSTTAEVQQVLNRSMD-PKNYE----SGGGHSQPPLIAQLPTMQLPLLPQVGAH 175
Query: 570 ---------------------------HIITSGTRKDCIRLRGLPYEAL 591
H+ITSGT K+CIRLRGLPYEA+
Sbjct: 176 SLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIRLRGLPYEAM 224
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 222 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 281
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 282 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 82 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 141
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 142 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 201
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 202 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 256
Query: 489 DAFVLFEKEEEADKALSK---HKESIG--IRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A + H G RYIE+F+ + ++ VLN + P
Sbjct: 257 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 310
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 299 PFFFNMPRM--PVTPQVLPKFPVHQLNQTPT-----------------VYTIPTPGNPVA 339
P +P M P+ PQV H L +P + T T N +
Sbjct: 156 PLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIR 215
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF-IDQEHRDMALKR 398
L L + +L+ + + + + GV + ++A G+ +GEA ++ +++ R A +R
Sbjct: 216 LRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRR 275
Query: 399 HKHHI----DKRYIEVTKANGEDFINVAGGN 425
H H++ RYIEV + +G+D V G
Sbjct: 276 HNHYMMFGKKYRYIEVFQCSGDDMNMVLNGG 306
>gi|24653903|ref|NP_725480.1| fusilli, isoform A [Drosophila melanogaster]
gi|7303049|gb|AAF58117.1| fusilli, isoform A [Drosophila melanogaster]
Length = 557
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 162/229 (70%), Gaps = 36/229 (15%)
Query: 394 MALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAK 453
MALKRHKHHI RYIEV +A+GEDF+ +AGG +NEAQAFL++GAQVIIRMRGLPY+ TAK
Sbjct: 1 MALKRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDATAK 60
Query: 454 QVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI 513
QV+DFF G C+V+DG EGVLFVKKPDG+ATGDAFVLF E +A KAL +H+ESIG
Sbjct: 61 QVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQ 120
Query: 514 RYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQ---- 569
RYIELFRSTTAEVQQVLN++M+ PKN + G +Q P+++ L + +P LPQ
Sbjct: 121 RYIELFRSTTAEVQQVLNRSMD-PKNYE----SGGGHSQPPLIAQLPTMQLPLLPQVGAH 175
Query: 570 ---------------------------HIITSGTRKDCIRLRGLPYEAL 591
H+ITSGT K+CIRLRGLPYEA+
Sbjct: 176 SLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIRLRGLPYEAM 224
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 222 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 281
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 282 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 314
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 82 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 141
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 142 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 201
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 202 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHII-----YQGVHMVINAQGQPSG 256
Query: 489 DAFVLFEKEEEAD-KALSKHKESI----GIRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A A +H + RYIE+F+ + ++ VLN + P
Sbjct: 257 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 310
>gi|324975474|gb|ADY62662.1| putative RNA-binding protein [Hottentotta judaicus]
Length = 180
Score = 256 bits (655), Expect = 2e-65, Method: Composition-based stats.
Identities = 117/156 (75%), Positives = 135/156 (86%), Gaps = 1/156 (0%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA+VRF++QEHRDMALKRHKHHI +RYIEV +A GEDF+NVAGG+
Sbjct: 26 GGVALCLSPQGRRNGEALVRFVNQEHRDMALKRHKHHIGQRYIEVYRATGEDFVNVAGGS 85
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
N+EAQ FL+RG QVI+RMRGLPY+CT +QVI+FF G + C VMD EEGVLFV+KPDG+
Sbjct: 86 NHEAQTFLSRGGQVIVRMRGLPYDCTPQQVIEFFSTG-DIVCQVMDSEEGVLFVRKPDGR 144
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
ATGDAFVLFE EE A KAL KH++ IG RYIELFRS
Sbjct: 145 ATGDAFVLFETEEMAGKALQKHRQVIGSRYIELFRS 180
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 39/148 (26%)
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
R RGLP++ + + + FF N++ G GV P G+ G+A V F +E D
Sbjct: 1 RARGLPWQSSDQDIAKFFRG-----LNIVRG--GVALCLSPQGRRNGEALVRFVNQEHRD 53
Query: 502 KALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQ 561
AL +HK IG RYIE++R+T + V SN+ Q LS Q
Sbjct: 54 MALKRHKHHIGQRYIEVYRATGEDFVNVAG------------GSNH---EAQTFLSRGGQ 98
Query: 562 VPVPYLPQHIITSGTRKDCIRLRGLPYE 589
V +R+RGLPY+
Sbjct: 99 V-----------------IVRMRGLPYD 109
Score = 43.9 bits (102), Expect = 0.22, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NIV GV + + QG+ +GEA ++ ++ +A + RH ++ QRYIEV++ +GE
Sbjct: 22 NIVRGGVALCLSPQGRRNGEALVRFVNQEHRDMALK-RHKHHI----GQRYIEVYRATGE 76
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
D V G +S G+ ++ LP+ P
Sbjct: 77 DFVNVAGGSNHEAQTFLSRGGQVIVRMRGLPYDCTP 112
>gi|260819360|ref|XP_002605005.1| hypothetical protein BRAFLDRAFT_285603 [Branchiostoma floridae]
gi|229290334|gb|EEN61015.1| hypothetical protein BRAFLDRAFT_285603 [Branchiostoma floridae]
Length = 645
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 156/226 (69%), Gaps = 23/226 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVA+CL+ GRRNGEA+VRF +EHRD+AL RHKHHI +RYIEV KA GEDF+ VAGGN
Sbjct: 242 GGVAVCLNPQGRRNGEALVRFASKEHRDLALLRHKHHIGQRYIEVYKATGEDFLKVAGGN 301
Query: 426 NNEAQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
NEA AFL A+VI+RMRGLPY TA +++FF SC V GE+G+LFV+ +G
Sbjct: 302 ANEATAFLRDSAAEVIVRMRGLPYTATAADILNFF----GQSCPVAGGEKGILFVRYANG 357
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTS 544
++TGDAFVLFE E A AL+KHKES+G RYIELFRST AEVQQV N+ + P
Sbjct: 358 RSTGDAFVLFETEAYAQLALAKHKESLGKRYIELFRSTAAEVQQVWNRYQQCP------- 410
Query: 545 SNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
L H +P LPQ IT G+ +DC+R+RGLPY+A
Sbjct: 411 -----------LIHTTPTMIPMLPQQAITCGSIRDCVRMRGLPYQA 445
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ +L FLGE+A + G+HMV NS G+PSG+ FIQM S +A AA+ H + M
Sbjct: 448 DDVLAFLGEYAVYVRDHGIHMVLNSSGKPSGDCFIQMYSPEAARQAAEKCHRQYM----G 503
Query: 123 QRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGML 164
RYIEVFQCSG++MN VL NG+ P P + ++L GM+
Sbjct: 504 DRYIEVFQCSGDEMNFVLMGGQLNKNGIYPGYPPQVQVPQMSILPQGMM 552
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ A GR G+A V F + + +AL +HK + KRYIE+ ++ + V
Sbjct: 345 GEKGILFVRYANGRSTGDAFVLFETEAYAQLALAKHKESLGKRYIELFRSTAAEVQQVWN 404
Query: 424 GNNN--------------EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNV 469
QA + +RMRGLPY+ T V+ F E + V
Sbjct: 405 RYQQCPLIHTTPTMIPMLPQQAITCGSIRDCVRMRGLPYQATHDDVLAFL---GEYAVYV 461
Query: 470 MDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQ 528
D G+ V GK +GD F+ E A +A K H++ +G RYIE+F+ + E+
Sbjct: 462 RD--HGIHMVLNSSGKPSGDCFIQMYSPEAARQAAEKCHRQYMGDRYIEVFQCSGDEMNF 519
Query: 529 VL 530
VL
Sbjct: 520 VL 521
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 38/161 (23%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R+RGLP++ + + + FF N+ G GV P G+ G+A V F +E
Sbjct: 214 TILRVRGLPWQSSDQDIARFFRG-----LNITKG--GVAVCLNPQGRRNGEALVRFASKE 266
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK IG RYIE++++T + +V + N A +
Sbjct: 267 HRDLALLRHKHHIGQRYIEVYKATGEDFLKV--------------AGGNANEATAFLRDS 312
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
A+V +R+RGLPY A + FF
Sbjct: 313 AAEV-----------------IVRMRGLPYTATAADILNFF 336
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N QG+ +GEA ++ S+ LA LRH ++ QRYIEV++ +GE
Sbjct: 238 NITKGGVAVCLNPQGRRNGEALVRFASKEHRDLAL-LRHKHHI----GQRYIEVYKATGE 292
Query: 135 DMNLVLNG 142
D V G
Sbjct: 293 DFLKVAGG 300
>gi|123704039|ref|NP_001074045.1| epithelial splicing regulatory protein 1 [Danio rerio]
gi|143360736|sp|A1L1G1.1|ESRP1_DANRE RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|120537378|gb|AAI29045.1| RNA binding motif protein 35A [Danio rerio]
Length = 714
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 164/238 (68%), Gaps = 19/238 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFESEEHRDLALQRHKHHMGGRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE +FL+R Q+I+RMRGLP+ TA+QV+ FF +C V DG EG+LFV+ PDG+
Sbjct: 313 SNEVASFLSRENQIIVRMRGLPFNATAEQVLQFFSP----ACPVTDGSEGILFVRFPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELF+ST AEVQQVLNK P
Sbjct: 369 PTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFKSTAAEVQQVLNKYSSAPLIP----- 423
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+LS +A P ++PQ G R DC+RLRGLPY+A + DI F+G+
Sbjct: 424 ----VAPSPILSVVA--PPTFVPQTAAVPGVR-DCVRLRGLPYDA--SIQDILVFLGE 472
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 24/131 (18%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL FLGE+ ++I GVHMV N QG+PSGEAFIQM S A+LAAQ H R+M
Sbjct: 463 IQDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-------------------VLPPTSPAISPVGKTLLSPG 162
K+RY+EVF CS +++N+VL G P +P + P G L +
Sbjct: 519 KERYVEVFACSAQEVNIVLMGGTLNRSGLSPPPCLSPPSYTFPHGAPVL-PAGAVLPAGA 577
Query: 163 MLPHSSQPLYP 173
+LP S +YP
Sbjct: 578 VLPVESAGIYP 588
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 28/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED------------------ 417
GR G+A V F +EH ALK+HK + KRYIE+ K+ +
Sbjct: 367 GRPTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFKSTAAEVQQVLNKYSSAPLIPVAP 426
Query: 418 --FINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEE 474
++V Q G + +R+RGLPY+ + + ++ F E G + +
Sbjct: 427 SPILSVVAPPTFVPQTAAVPGVRDCVRLRGLPYDASIQDILVFLGEYGADIKTH------ 480
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +G+AF+ E A A + HK S+ RY+E+F + EV VL
Sbjct: 481 GVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSMKERYVEVFACSAQEVNIVL 537
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF N+ G G G+ G+A V FE EE
Sbjct: 225 TVIRARGLPWQSSDQDIARFFRG-----LNIAKG--GAALCLNAQGRRNGEALVRFESEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 278 HRDLALQRHKHHMGGRYIEVYKATGEDFLKIAGGT 312
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ +SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFESEEHRDLALQ-RHKHHM----GGRYIEVYKATGE 303
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 304 DFLKIAGGT 312
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLITSQYKE 52
P Y + F T+G G+ LGSDE+EI+ L++ ++D VN++L+ + E
Sbjct: 5 PDYLVLLFTTTSGASGDKLGSDEKEIVQLVWQVVDLATKKAGQVNELLVKPDHIE 59
>gi|47217849|emb|CAG02342.1| unnamed protein product [Tetraodon nigroviridis]
Length = 776
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 161/228 (70%), Gaps = 16/228 (7%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCL+A GRRNGEA+VRFI+ EHRD+AL+RHKHH+ RYIEV KA GE+F+ +A
Sbjct: 280 IARGGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGNRYIEVYKATGEEFLKIA 339
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG +NE FL++ QVIIRMRGLP+ T ++V+ F G E+ V DG EG+LFVK P
Sbjct: 340 GGTSNEVAQFLSKENQVIIRMRGLPFTATPQEVLSFL--GPESP--VTDGSEGLLFVKYP 395
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P ++L
Sbjct: 396 DGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTL 455
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
S PM+S VPV P + T+ T +DC+RLRGLPY A
Sbjct: 456 PPS--------PMVS----VPVLSTPPFLPTASTARDCVRLRGLPYTA 491
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 13/101 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 493 IEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSPDKAFMVAQKCHKKTM---- 548
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISP 153
K RY+EVFQCS E+M++VL +G+ PP P +SP
Sbjct: 549 KDRYVEVFQCSTEEMSIVLMGGTLNRSGLSPPPCKLPCLSP 589
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 397 GRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 456
Query: 428 ----------EAQAFL--TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
FL A+ +R+RGLPY + +++F E++ ++ G
Sbjct: 457 PSPMVSVPVLSTPPFLPTASTARDCVRLRGLPYTAGIEDILEFM---GEHTVDIK--PHG 511
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
V V G+ +GDAF+ + ++A K HK+++ RY+E+F+ +T E+ VL
Sbjct: 512 VHMVLNQQGRPSGDAFIQMKSPDKAFMVAQKCHKKTMKDRYVEVFQCSTEEMSIVL 567
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 22/147 (14%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +IR RGLP++ + + + FF+ ++ G GV G+ G+A V F
Sbjct: 254 ETVIRARGLPWQSSDQDIARFFKG-----LSIARG--GVALCLNAQGRRNGEALVRFINS 306
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL--- 549
E D AL +HK +G RYIE++++T E ++ T L K N + GL
Sbjct: 307 EHRDLALERHKHHMGNRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFT 366
Query: 550 SAQQPMLSHLAQVPVPYLPQHIITSGT 576
+ Q +LS L P+ +T G+
Sbjct: 367 ATPQEVLSFLG-------PESPVTDGS 386
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+EIILL++ I+D + KV
Sbjct: 11 VFFGATAGANGGKLGSDEREIILLVWQIVDLHEKKV 46
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
+I GV + N+QG+ +GEA ++ ++SEH A RH +M RYIEV++ +G
Sbjct: 279 SIARGGVALCLNAQGRRNGEALVRFINSEHRDL--ALERHKHHM----GNRYIEVYKATG 332
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 333 EEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATP 369
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 19/116 (16%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 370 QEVLSFLGPESPVTDGSEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALK-KHKQ--ILGK 426
Query: 122 KQRYIEVFQCSGEDMNLVLN--------GVLPPTSPAIS-PVGKTLLSPGMLPHSS 168
RYIE+F+ + ++ VLN LPP SP +S PV L +P LP +S
Sbjct: 427 --RYIELFRSTAAEVQQVLNRYMSTPLISTLPP-SPMVSVPV---LSTPPFLPTAS 476
>gi|40548306|ref|NP_954966.1| epithelial splicing regulatory protein 2 [Danio rerio]
gi|28279592|gb|AAH45439.1| RNA binding motif protein 35B [Danio rerio]
Length = 736
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 161/239 (67%), Gaps = 18/239 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRDMAL RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ Q+IIRMRGLP+ T + V+ F G E C V DG EG+LFVK PDG+
Sbjct: 312 SNEVAQFLSKENQMIIRMRGLPFTATPQDVLGFL--GPE--CPVTDGTEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P L S+
Sbjct: 368 PTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTP----LIST 423
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQ 603
+ LA P +IT+G +DCIRLRGLPY A + DI F+G+
Sbjct: 424 LPPPPPPMVSVPVLATPP-------LITTGNTRDCIRLRGLPYTA--AIEDILEFMGEH 473
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 29/150 (19%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 463 IEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----------------VLPPT------SPAISPVGKTL 158
K RY+EVFQCS E+M+ VL G + PPT +PA+ P L
Sbjct: 519 KDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAMLPTEAGL 578
Query: 159 LSPGMLPHSSQPLYPQHNTQINPGLSHLDP 188
P +L P P H+ P ++ P
Sbjct: 579 YQPPLLATPRTPQAPTHSPA--PAFAYYSP 606
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 366 GRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 425
Query: 428 ------------EAQAFLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+T G + IR+RGLPY + +++F E++ ++
Sbjct: 426 PPPPPMVSVPVLATPPLITTGNTRDCIRLRGLPYTAAIEDILEFM---GEHTIDIK--PH 480
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ + + A K HK+ + RY+E+F+ +T E+ VL
Sbjct: 481 GVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVL 537
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 222 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFIN 274
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E D AL +HK +G RYIE++++T E ++ T +N + LS + M+
Sbjct: 275 SEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT-----SNEVA---QFLSKENQMI 326
Query: 557 SHLAQVPVPYLPQHII 572
+ +P PQ ++
Sbjct: 327 IRMRGLPFTATPQDVL 342
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+E+ILL++ I+D + NKV
Sbjct: 10 VFFGATAGANGGKLGSDERELILLVWQIVDLHENKV 45
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 158/393 (40%), Gaps = 93/393 (23%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 339 QDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALK-KHKQ--ILGK 395
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPV---------GKTLLSPGM--------- 163
RYIE+F+ + ++ VLN + ++P IS + L +P +
Sbjct: 396 --RYIELFRSTAAEVQQVLNRYM--STPLISTLPPPPPPMVSVPVLATPPLITTGNTRDC 451
Query: 164 -----LPHSSQ-----PLYPQHNTQINPGLSHL----------DPLVNVHLTQA---LAQ 200
LP+++ +H I P H+ D + + +AQ
Sbjct: 452 IRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQ 511
Query: 201 AQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHT-----------PTLIPAPSPNAL 249
+ K +D + + Q + ++M+ + + +G + PT P+ A+
Sbjct: 512 KCHKKMMKDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAM 571
Query: 250 MP-------PPL--NSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPF 300
+P PPL ++ PT+ PA P Y P QL +NMN ++ T +
Sbjct: 572 LPTEAGLYQPPLLATPRTPQAPTHSPA----PAFAYYSP--QLYMNMNMSY------TTY 619
Query: 301 FFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPT-------PGNPVALCPLVQNIWLSLLL 353
+ P PV+P + F + V PT PG V + L N + +L
Sbjct: 620 Y---PSPPVSPSTVSYFAAPPGSVAAAVAAQPTPAILPPQPGALVRMQGLPYNAGVKDIL 676
Query: 354 NTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF 386
+ GY+ L V + + G+R+GEA+V F
Sbjct: 677 SFFQGYQ--LQADSVLVLYNWSGQRSGEALVTF 707
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ ++SEH A RH +M RYIEV++ +G
Sbjct: 248 NIAKGGVALCLNAQGRRNGEALVRFINSEHRDM--ALDRHKHHM----GSRYIEVYKATG 301
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 302 EEFLKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATP 338
>gi|134047877|sp|Q7ZVR8.2|ESRP2_DANRE RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
Length = 736
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 160/239 (66%), Gaps = 18/239 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRDMAL RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ Q+IIRMRGLP+ T + V+ F G E C V DG EG+LFVK PDG+
Sbjct: 312 SNEVAQFLSKENQMIIRMRGLPFTATPQDVLGFL--GPE--CPVTDGTEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P L S+
Sbjct: 368 PTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTP----LIST 423
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQ 603
+ LA P IT+G +DCIRLRGLPY A + DI F+G+
Sbjct: 424 LPPPPPPMVSVPVLATPP-------FITTGNTRDCIRLRGLPYTA--AIEDILEFMGEH 473
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 29/150 (19%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 463 IEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----------------VLPPT------SPAISPVGKTL 158
K RY+EVFQCS E+M+ VL G + PPT +PA+ P L
Sbjct: 519 KDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAMLPTEAAL 578
Query: 159 LSPGMLPHSSQPLYPQHNTQINPGLSHLDP 188
P +L P P H+ P ++ P
Sbjct: 579 YQPPLLATPRTPQAPTHSPA--PAFAYYSP 606
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 366 GRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 425
Query: 428 ------------EAQAFLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
F+T G + IR+RGLPY + +++F E++ ++
Sbjct: 426 PPPPPMVSVPVLATPPFITTGNTRDCIRLRGLPYTAAIEDILEFM---GEHTIDIK--PH 480
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ + + A K HK+ + RY+E+F+ +T E+ VL
Sbjct: 481 GVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVL 537
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 222 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFIN 274
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E D AL +HK +G RYIE++++T E ++ T +N + LS + M+
Sbjct: 275 SEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT-----SNEVA---QFLSKENQMI 326
Query: 557 SHLAQVPVPYLPQHII 572
+ +P PQ ++
Sbjct: 327 IRMRGLPFTATPQDVL 342
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+E+ILL++ I+D + NKV
Sbjct: 10 VFFGATAGANGGKLGSDERELILLVWQIVDLHENKV 45
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 156/393 (39%), Gaps = 93/393 (23%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 339 QDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALK-KHKQ--ILGK 395
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPV---------GKTLLSPGM--------- 163
RYIE+F+ + ++ VLN + ++P IS + L +P
Sbjct: 396 --RYIELFRSTAAEVQQVLNRYM--STPLISTLPPPPPPMVSVPVLATPPFITTGNTRDC 451
Query: 164 -----LPHSSQ-----PLYPQHNTQINPGLSHL----------DPLVNVHLTQA---LAQ 200
LP+++ +H I P H+ D + + +AQ
Sbjct: 452 IRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQ 511
Query: 201 AQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTP-------------TLIPA---- 243
+ K +D + + Q + ++M+ + + +G +P PA
Sbjct: 512 KCHKKMMKDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAM 571
Query: 244 -PSPNALMPPPL--NSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPF 300
P+ AL PPL ++ PT+ PA P Y P QL +NMN ++ T +
Sbjct: 572 LPTEAALYQPPLLATPRTPQAPTHSPA----PAFAYYSP--QLYMNMNMSY------TTY 619
Query: 301 FFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPT-------PGNPVALCPLVQNIWLSLLL 353
+ P PV+P + F + V PT PG V + L N + +L
Sbjct: 620 Y---PSPPVSPSTVSYFAAPPGSVAAAVAAQPTPAILPPQPGALVRMQGLPYNAGVKDIL 676
Query: 354 NTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF 386
+ GY+ L V + + G+R+GEA+V F
Sbjct: 677 SFFQGYQ--LQADSVLVLYNWSGQRSGEALVTF 707
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ ++SEH A RH +M RYIEV++ +G
Sbjct: 248 NIAKGGVALCLNAQGRRNGEALVRFINSEHRDM--ALDRHKHHM----GSRYIEVYKATG 301
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 302 EEFLKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATP 338
>gi|41351452|gb|AAH65688.1| Rbm35b protein [Danio rerio]
Length = 711
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 160/239 (66%), Gaps = 18/239 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRDMAL RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ Q+IIRMRGLP+ T + V+ F G E C V DG EG+LFVK PDG+
Sbjct: 312 SNEVAQFLSKENQMIIRMRGLPFTATPQDVLGFL--GPE--CPVTDGTEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P L S+
Sbjct: 368 PTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTP----LIST 423
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQ 603
+ LA P IT+G +DCIRLRGLPY A + DI F+G+
Sbjct: 424 LPPPPPPMVSVPVLATPP-------FITTGNTRDCIRLRGLPYTA--AIEDILEFMGEH 473
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 29/150 (19%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 463 IEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----------------VLPPT------SPAISPVGKTL 158
K RY+EVFQCS E+M+ VL G + PPT +PA+ P L
Sbjct: 519 KDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAMLPTEAAL 578
Query: 159 LSPGMLPHSSQPLYPQHNTQINPGLSHLDP 188
P +L P P H+ P ++ P
Sbjct: 579 YQPPLLATPRTPQAPTHSPA--PAFAYYSP 606
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 366 GRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 425
Query: 428 ------------EAQAFLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
F+T G + IR+RGLPY + +++F E++ ++
Sbjct: 426 PPPPPMVSVPVLATPPFITTGNTRDCIRLRGLPYTAAIEDILEFM---GEHTIDIK--PH 480
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ + + A K HK+ + RY+E+F+ +T E+ VL
Sbjct: 481 GVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVL 537
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 222 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFIN 274
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E D AL +HK +G RYIE++++T E ++ T +N + LS + M+
Sbjct: 275 SEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT-----SNEVA---QFLSKENQMI 326
Query: 557 SHLAQVPVPYLPQHII 572
+ +P PQ ++
Sbjct: 327 IRMRGLPFTATPQDVL 342
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+E+ILL++ I+D + NKV
Sbjct: 10 VFFGATAGANGGKLGSDERELILLVWQIVDLHENKV 45
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ ++SEH A RH +M RYIEV++ +G
Sbjct: 248 NIAKGGVALCLNAQGRRNGEALVRFINSEHRDM--ALDRHKHHM----GSRYIEVYKATG 301
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 302 EEFLKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATP 338
>gi|432852904|ref|XP_004067443.1| PREDICTED: epithelial splicing regulatory protein 2-like [Oryzias
latipes]
Length = 695
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/225 (56%), Positives = 160/225 (71%), Gaps = 18/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFID EHRD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 209 GGVALCLNAQGRRNGEALVRFIDSEHRDLALERHKHHMGCRYIEVYKATGEEFLKIAGGT 268
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T+++V+ F G E+ V DG EG+LFVK PDG+
Sbjct: 269 SNEVAQFLSKENQVIIRMRGLPFTATSQEVLSFL--GPESP--VTDGAEGLLFVKYPDGR 324
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE AL KHK+ +G RYIELFRST AEVQQVLN+ M P ++L +S
Sbjct: 325 PTGDAFVLFSCEEYVQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPAS 384
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P++ LA P+LP + + +DC+RLRGLPY A
Sbjct: 385 --------PIVPVLAS--QPFLP----AATSTRDCVRLRGLPYTA 415
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 24/133 (18%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 417 IEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKTM---- 472
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----------------VLPPTSPAISPVGKTLLSPGML 164
K RY+EVFQCS E+M++VL G + PPT+ A P +LS
Sbjct: 473 KDRYVEVFQCSTEEMSIVLMGGTLNRSGLSPPPCKLPCLSPPTAYAAFPTSPAILSEAAF 532
Query: 165 ---PHSSQPLYPQ 174
P + P +PQ
Sbjct: 533 YQPPLLAAPRHPQ 545
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 323 GRPTGDAFVLFSCEEYVQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 382
Query: 428 --------EAQAFL--TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
+Q FL + +R+RGLPY + +++F E++ ++ GV
Sbjct: 383 ASPIVPVLASQPFLPAATSTRDCVRLRGLPYTAGIEDILEFM---GEHTVDIKP--HGVH 437
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
V G+ +GDAF+ + + A K HK+++ RY+E+F+ +T E+ VL
Sbjct: 438 MVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKTMKDRYVEVFQCSTEEMSIVL 491
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 179 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFID 231
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL-- 549
E D AL +HK +G RYIE++++T E ++ T L K N + GL
Sbjct: 232 SEHRDLALERHKHHMGCRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPF 291
Query: 550 -SAQQPMLSHLA 560
+ Q +LS L
Sbjct: 292 TATSQEVLSFLG 303
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 154/399 (38%), Gaps = 71/399 (17%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E Y+ L+ ++ I GK
Sbjct: 296 QEVLSFLGPESPVTDGAEGLLFVKYPDGRPTGDAFVLFSCEE--YVQNALKKHKQ-ILGK 352
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYP-------- 173
RYIE+F+ + ++ VLN + ++P IS + + + P + +SQP P
Sbjct: 353 --RYIELFRSTAAEVQQVLNRYM--STPLISTLPASPIVPVL---ASQPFLPAATSTRDC 405
Query: 174 --------------------QHNTQINPGLSHL----------DPLVNVHLTQA---LAQ 200
+H I P H+ D + + +AQ
Sbjct: 406 VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQ 465
Query: 201 AQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTPT-----LIPAPSPNALMP--PP 253
+ K+ +D + + Q + ++M+ + + +G +P + P+ A P P
Sbjct: 466 KCHKKTMKDRYVEVFQCSTEEMSIVLMGGTLNRSGLSPPPCKLPCLSPPTAYAAFPTSPA 525
Query: 254 LNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQV 313
+ S++ L A P P + P L HL MN + P PV+P
Sbjct: 526 ILSEAAFYQPPLLAAPRHPQTTVASPAHTLAYYPPQPHLYMNMNMNYTAYYPSPPVSPST 585
Query: 314 LPKFPVHQLNQTPTVYTIPTPG-------NPVALCP---LVQNIWLSLLLNTIPGYEQVL 363
+ F V P PG P AL L N + +L+ GY+ L
Sbjct: 586 VGYFAAPPGAVAAAVAASPHPGAASTVLSQPGALVRMQGLPYNTGVKDILSFFQGYQ--L 643
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHH 402
V + + G+ +GEA++ F ++ A+ +H
Sbjct: 644 QPDAVVILYNFSGQCSGEALITFPSEDLARRAVAERSNH 682
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNK 43
VFF ATAG G LGSDE+EIILL++ I+D + K
Sbjct: 10 VFFGATAGANGGKLGSDEREIILLVWQIVDLHEKK 44
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ +DSEH A RH +M RYIEV++ +G
Sbjct: 205 NIAKGGVALCLNAQGRRNGEALVRFIDSEHRDL--ALERHKHHM----GCRYIEVYKATG 258
Query: 134 EDMNLVLNGV 143
E+ + G
Sbjct: 259 EEFLKIAGGT 268
>gi|410912184|ref|XP_003969570.1| PREDICTED: epithelial splicing regulatory protein 2-like [Takifugu
rubripes]
Length = 740
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/225 (56%), Positives = 158/225 (70%), Gaps = 16/225 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINPEHRDLALERHKHHMGNRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T ++V+ F G E+ V DG EG+LFVK PDG+
Sbjct: 312 SNEVTQFLSKENQVIIRMRGLPFTATPQEVLSFI--GPESP--VTDGAEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P ++L S
Sbjct: 368 PTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPPS 427
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P++ P+LP T+ T +DC+RLRGLPY A
Sbjct: 428 --------PIVPVSVLTTPPFLP----TASTTRDCVRLRGLPYTA 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 13/101 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQ+ S A+L AQ H + M
Sbjct: 462 IEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQLKSPDKAFLVAQKCHKKTM---- 517
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISP 153
K RY+EVFQCS E+M++VL +G+ PP P +SP
Sbjct: 518 KDRYVEVFQCSTEEMSIVLMGGTLNRSGLSPPPCKLPCLSP 558
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNE------- 428
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 366 GRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 425
Query: 429 -----------AQAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
FL + +R+RGLPY + +++F E++ ++ G
Sbjct: 426 PSPIVPVSVLTTPPFLPTASTTRDCVRLRGLPYTAGIEDILEFM---GEHTVDIK--PHG 480
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
V V G+ +GDAF+ + ++A K HK+++ RY+E+F+ +T E+ VL
Sbjct: 481 VHMVLNQQGRPSGDAFIQLKSPDKAFLVAQKCHKKTMKDRYVEVFQCSTEEMSIVL 536
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +IR RGLP++ + + + FF+ T + G GV G+ G+A V F
Sbjct: 223 ETVIRARGLPWQSSDQDIARFFKGLT-----IAKG--GVALCLNAQGRRNGEALVRFINP 275
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
E D AL +HK +G RYIE++++T E ++ T +N +T LS + ++
Sbjct: 276 EHRDLALERHKHHMGNRYIEVYKATGEEFLKIAGGT-----SNEVT---QFLSKENQVII 327
Query: 558 HLAQVPVPYLPQHIIT 573
+ +P PQ +++
Sbjct: 328 RMRGLPFTATPQEVLS 343
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+EIILL++ I+D + KV
Sbjct: 10 VFFGATAGANGGKLGSDEREIILLVWQIVDLHDKKV 45
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 151/414 (36%), Gaps = 99/414 (23%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L F+G E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 339 QEVLSFIGPESPVTDGAEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALK-KHKQ--ILGK 395
Query: 122 KQRYIEVFQCSGEDMNLVLN--------GVLPPTSPAISPVGKTLLSPGMLPHSSQP--- 170
RYIE+F+ + ++ VLN LPP+ I PV L +P LP +S
Sbjct: 396 --RYIELFRSTAAEVQQVLNRYMSTPLISTLPPS--PIVPVS-VLTTPPFLPTASTTRDC 450
Query: 171 -----------------LYPQHNTQINPGLSHL----------DPLVNVHLTQA---LAQ 200
+H I P H+ D + + +AQ
Sbjct: 451 VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQLKSPDKAFLVAQ 510
Query: 201 AQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTT 260
+ K+ +D + + Q + ++M+ + L G T + L PPP +
Sbjct: 511 KCHKKTMKDRYVEVFQCSTEEMS-------IVLMGGTLNR------SGLSPPPCKLPCLS 557
Query: 261 IPTNLPALPAVPT--------------------SGGYFPQFQLPINMNTAHLLQPMNTPF 300
PT A P P+ + + P L HL MN
Sbjct: 558 PPTAYAAFPTPPSVLSEAALYQPPLLAAPRPPQTTAHSPAHALAYYPPHPHLYMNMNYTA 617
Query: 301 FFNMPRMPVTPQVLPKFPV------------HQLNQTPTVYTIPTPGNPVALCPLVQNIW 348
++ P PV+P + F + + +P PG V + L N
Sbjct: 618 YYPSP--PVSPSTVGYFAAPPGSVAAAVAAQPHHHAAASSPVLPQPGALVRMQGLPYNTG 675
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHH 402
+ +L+ GY+ L V + + G+ +GEA++ F +E A+ +H
Sbjct: 676 VKDILSFFQGYQ--LQPDAVLILYNFSGQCSGEALITFPSEEMAKQAVAERSNH 727
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
I GV + N+QG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 248 TIAKGGVALCLNAQGRRNGEALVRFINPEHRDLALE-RHKHHM----GNRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + ++ LP ++ P
Sbjct: 303 EFLKIAGGTSNEVTQFLSKENQVIIRMRGLPFTATP 338
>gi|47225436|emb|CAG11919.1| unnamed protein product [Tetraodon nigroviridis]
Length = 751
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 164/240 (68%), Gaps = 20/240 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 280 GGVALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 339
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPD 483
+NE FL+R Q+IIRMRGLP+ T +QV+ FF G + +C V G++G+LFV+ PD
Sbjct: 340 SNEVAMFLSREDQIIIRMRGLPFTATHEQVLSFFSPGEGLKGTCPVSGGKDGILFVRYPD 399
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TGDAFVLF EE A AL KHKE +G RYIELF+ST AEVQQVLN+ P
Sbjct: 400 GRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLNRYSSAPLIP--- 456
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P++S L V + LP G +DC+RLRGLPY A I+ DI F+G+
Sbjct: 457 ------VAPAPLVSVLPTVSL--LP----PPGGLRDCLRLRGLPYTA--IIEDILNFLGE 502
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 51/114 (44%), Gaps = 32/114 (28%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQ------------------------------G 89
++E IL FLGEF ++ GVHMV N Q G
Sbjct: 491 AIIEDILNFLGEFTRDVRPHGVHMVLNQQVRAGTYRAQGPTPPGARLRRHPPWSASCLQG 550
Query: 90 QPSGEAFIQMDSEHSAYLAAQLRHNRNMIF--GKKQRYIEVFQCSGEDMNLVLN 141
+PSG+ FIQM S A AAQ H + M G RY+EVF CS E+M L+
Sbjct: 551 RPSGDCFIQMTSVEQALQAAQQLHKQVMFSQRGSNSRYVEVFPCSAEEMGLLWK 604
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF N+ G GV G+ G+A V F EE
Sbjct: 252 TVIRARGLPWQSSDQDIARFFRG-----LNIAKG--GVALCLNAQGRRNGEALVRFVSEE 304
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 305 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 339
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 276 NIAKGGVALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 330
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 331 DFLKIAGGT 339
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 49/212 (23%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +EH AL++HK + +RYIE+ K+ + V
Sbjct: 388 GKDGILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLN 447
Query: 424 GNNNE-----AQAFLTR------------GAQVIIRMRGLPYECTAKQVIDFFEAGTEN- 465
++ A A L G + +R+RGLPY + +++F T +
Sbjct: 448 RYSSAPLIPVAPAPLVSVLPTVSLLPPPGGLRDCLRLRGLPYTAIIEDILNFLGEFTRDV 507
Query: 466 ---------SCNVMDGE--------EGVLFVKKP-------DGKATGDAFVLFEKEEEAD 501
+ V G G + P G+ +GD F+ E+A
Sbjct: 508 RPHGVHMVLNQQVRAGTYRAQGPTPPGARLRRHPPWSASCLQGRPSGDCFIQMTSVEQAL 567
Query: 502 KALSK-HKESI------GIRYIELFRSTTAEV 526
+A + HK+ + RY+E+F + E+
Sbjct: 568 QAAQQLHKQVMFSQRGSNSRYVEVFPCSAEEM 599
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 6 YYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLITSQYKEPIQG 56
Y V F AT+G G+LLGSDE+E++ L++ ++D VN+++I + E G
Sbjct: 9 YLAVVFAATSGASGDLLGSDEKELVQLVWQLVDLKNQKLGKVNELIIKADLSELTDG 65
>gi|410905415|ref|XP_003966187.1| PREDICTED: epithelial splicing regulatory protein 1-like [Takifugu
rubripes]
Length = 741
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 168/250 (67%), Gaps = 22/250 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI++EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 262 GGVALCLNAQGRRNGEALVRFINEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 321
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPD 483
+NE FL+R Q+I+RMRGLP+ T +QV+ FF G + +C + G++G+LFV+ PD
Sbjct: 322 SNEVAMFLSREDQIIVRMRGLPFTATHEQVLSFFSPGEGLKETCPISGGQDGILFVRYPD 381
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TGDAFVLF EE A AL KHKE +G RYIELF+ST AEVQQVLN+ P
Sbjct: 382 GRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLNRYSSAPLIP--- 438
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P++S L V + LP G +DC+RLRGLPY A + DI F+G+
Sbjct: 439 ------VAPAPLVSVLPAVSL--LP----PPGGMRDCLRLRGLPYTA--SIEDILNFLGE 484
Query: 603 --QDSFVHKV 610
QD H V
Sbjct: 485 FTQDVRQHGV 494
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF-- 119
+E IL FLGEF ++ GVHMV N QG+PSG+ FIQM S A A+Q H + M
Sbjct: 475 IEDILNFLGEFTQDVRQHGVHMVLNQQGRPSGDCFIQMTSLERALQASQRLHKQVMFSQR 534
Query: 120 GKKQRYIEVFQCSGEDMNLVLNG 142
G RY+EVF CS E+M LVL G
Sbjct: 535 GSNSRYVEVFPCSAEEMGLVLMG 557
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 29/191 (15%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +EH AL++HK + +RYIE+ K+ + V
Sbjct: 370 GQDGILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLN 429
Query: 424 GNNNE-----AQAFLTR------------GAQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
++ A A L G + +R+RGLPY + + +++F T++
Sbjct: 430 RYSSAPLIPVAPAPLVSVLPAVSLLPPPGGMRDCLRLRGLPYTASIEDILNFLGEFTQDV 489
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESI------GIRYIELF 519
+ GV V G+ +GD F+ E A +A + HK+ + RY+E+F
Sbjct: 490 -----RQHGVHMVLNQQGRPSGDCFIQMTSLERALQASQRLHKQVMFSQRGSNSRYVEVF 544
Query: 520 RSTTAEVQQVL 530
+ E+ VL
Sbjct: 545 PCSAEEMGLVL 555
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF N+ G GV G+ G+A V F EE
Sbjct: 234 TVIRARGLPWQSSDQDIARFFRG-----LNIAKG--GVALCLNAQGRRNGEALVRFINEE 286
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 287 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 321
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ +E LA Q RH +M RYIEV++ +GE
Sbjct: 258 NIAKGGVALCLNAQGRRNGEALVRFINEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 312
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 313 DFLKIAGGT 321
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 6 YYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLITSQYKEPIQ 55
Y V F AT+G G+LLGSDE+E++ L++ ++D VN+++I E +
Sbjct: 7 YLVVLFTATSGASGDLLGSDEKELVQLVWQLVDLNNEKLGKVNELIIKPDLSESTE 62
>gi|432909348|ref|XP_004078165.1| PREDICTED: epithelial splicing regulatory protein 1-like [Oryzias
latipes]
Length = 656
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 131/248 (52%), Positives = 164/248 (66%), Gaps = 23/248 (9%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 272 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 331
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF--EAGTENSCNVMDGEEGVLFVKKPD 483
NE FL+R Q+I+RMRGLP+ T +QV+ FF + G +C V G++G+LFV+ PD
Sbjct: 332 TNEVAMFLSREDQIIVRMRGLPFTATYEQVLAFFSPKDGLNETCPVSGGKDGILFVRYPD 391
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TGDAFVLF EE A AL KHKE +G RYIELF+ST AEVQQVLN+ P
Sbjct: 392 GRPTGDAFVLFSCEEHALCALRKHKEILGKRYIELFKSTAAEVQQVLNRYSSTPLIP--- 448
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+LS L V + LP G +DC+RLRGLPY A + DI F+G+
Sbjct: 449 ------VAPAPLLSMLPSVSL--LP----PPGCVRDCLRLRGLPYTA--SIEDILAFLGE 494
Query: 603 QDSFVHKV 610
F H +
Sbjct: 495 ---FTHDI 499
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF N+ G G G+ G+A V F EE
Sbjct: 244 TVIRARGLPWQSSDQDIARFFRG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 296
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 297 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 331
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 268 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 322
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 323 DFLKIAGGT 331
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 5 QYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLI 46
Y VFF TAG G LLGSDE+E++ L++ ++D VN++LI
Sbjct: 6 DYLVVFFTTTAGACGELLGSDEKELVQLVWQLVDLKNKTLGRVNELLI 53
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +EH AL++HK + KRYIE+ K+ + V
Sbjct: 380 GKDGILFVRYPDGRPTGDAFVLFSCEEHALCALRKHKEILGKRYIELFKSTAAEVQQVLN 439
Query: 424 GNNNE-----AQAFLTR------------GAQVIIRMRGLPYECTAKQVIDFF 459
++ A A L + +R+RGLPY + + ++ F
Sbjct: 440 RYSSTPLIPVAPAPLLSMLPSVSLLPPPGCVRDCLRLRGLPYTASIEDILAFL 492
>gi|291232399|ref|XP_002736133.1| PREDICTED: fusilli-like [Saccoglossus kowalevskii]
Length = 636
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 158/232 (68%), Gaps = 26/232 (11%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+G GGVALCL+ GRRNGEA+VRF EHRD+AL+RHKHH+ RYIEV KA GE+F+ +A
Sbjct: 245 IGKGGVALCLNPQGRRNGEALVRFTCTEHRDLALQRHKHHLGHRYIEVYKATGEEFLKIA 304
Query: 423 GGNNNEAQAFLTR-GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G+++EA FL + +I+RMRGLP+ TAK V+ FF + C V EEGVLFV+
Sbjct: 305 AGSSSEASNFLAKDNGHIIVRMRGLPFTATAKDVLVFF----GDECPVSGAEEGVLFVRY 360
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME---LPK 538
PDG++TGDAFVLF E A AL+KHKE++G RYIELFRSTTAEVQQVL++ + +P
Sbjct: 361 PDGRSTGDAFVLFSTEANATSALAKHKENLGSRYIELFRSTTAEVQQVLSRYQQHPLIPN 420
Query: 539 NNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
T S VP LPQ +ITSG+ +DCIR+RGLP+ A
Sbjct: 421 GPPPTGS------------------VPILPQQMITSGSVRDCIRMRGLPFSA 454
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE I++FLGEFA I GVHMV N QG+PSG+AFIQM S A AAQ H ++M
Sbjct: 456 VEDIMKFLGEFAHYIRPHGVHMVLNQQGRPSGDAFIQMISAEKALHAAQQCHRKHM---- 511
Query: 122 KQRYIEVFQCSGEDMNLVL------NGVLPPTSPAISPVGKTLLSPGMLP 165
+RYIEVFQCSG++MN VL G L P + AI + PG +P
Sbjct: 512 GERYIEVFQCSGDEMNFVLMGGTLNRGGLSPPAGAIPAQAQFTPYPGTIP 561
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 40/161 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+ RGLP++ + K V FF+ +D G+ GV P G+ G+A V F E
Sbjct: 221 VIKARGLPWQSSDKDVAKFFKG--------LDIGKGGVALCLNPQGRRNGEALVRFTCTE 272
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +HK +G RYIE++++T E ++ + N + +NG
Sbjct: 273 HRDLALQRHKHHLGHRYIEVYKATGEEFLKIAAGSSSEASN--FLAKDNG---------- 320
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
HII +R+RGLP+ A + +FF
Sbjct: 321 -----------HII--------VRMRGLPFTATAKDVLVFF 342
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 37/180 (20%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F + + AL +HK ++ RYIE+ ++ + V
Sbjct: 363 GRSTGDAFVLFSTEANATSALAKHKENLGSRYIELFRSTTAEVQQVLSRYQQHPLIPNGP 422
Query: 422 --AGGNNNEAQAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE----- 473
G Q +T G+ + IRMRGLP+ + + ++ F GE
Sbjct: 423 PPTGSVPILPQQMITSGSVRDCIRMRGLPFSASVEDIMKFL------------GEFAHYI 470
Query: 474 --EGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ E+A A + H++ +G RYIE+F+ + E+ VL
Sbjct: 471 RPHGVHMVLNQQGRPSGDAFIQMISAEKALHAAQQCHRKHMGERYIEVFQCSGDEMNFVL 530
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 6 YYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
Y V F +T G +G LGSDE E++ L++++ID NKV+ Q
Sbjct: 7 YLVVLFASTPGQRGPYLGSDECEVVFLVWMVIDVETNKVVSVKQ 50
>gi|229485495|sp|B2RYD2.2|ESRP1_RAT RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
Length = 677
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 157/239 (65%), Gaps = 26/239 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP-------- 420
Query: 546 NNGLSAQQPMLSHLAQVP-VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L L P +P LPQ + +DC+RLRGLPY A + DI F+G+
Sbjct: 421 ----------LIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNE--------------AQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + +R+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 67/323 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNG-----VLP-PTSPAISPVGKTLLSPGM---------LPHSSQ-----PLYPQHNTQ 178
VLN ++P PT+P I + + + P LP+++ + +T
Sbjct: 412 VLNRFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTD 471
Query: 179 INPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQM--- 222
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 472 IRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMNFV 531
Query: 223 ---AALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFP 279
LN+ +P P+P A++P + P+ L A+ S Y+P
Sbjct: 532 LMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIP---TEAAIYQPSLLLNPRALQPSTAYYP 588
Query: 280 Q-FQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGNP 337
QL +N + P P +P L FP L+ P P PG
Sbjct: 589 AGTQLFMNYTAYY-------------PSPPGSPNSLGYFPTAANLSSVP-----PQPGTV 630
Query: 338 VALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 631 VRMQGLAYNTGVKEILNFFQGYQ 653
>gi|189230098|ref|NP_001121036.2| epithelial splicing regulatory protein 1 [Rattus norvegicus]
gi|187469151|gb|AAI66735.1| RGD1560481 protein [Rattus norvegicus]
Length = 659
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 157/239 (65%), Gaps = 26/239 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP-------- 420
Query: 546 NNGLSAQQPMLSHLAQVP-VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L L P +P LPQ + +DC+RLRGLPY A + DI F+G+
Sbjct: 421 ----------LIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNE--------------AQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + +R+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 67/323 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNG-----VLP-PTSPAISPVGKTLLSPGM---------LPHSSQ-----PLYPQHNTQ 178
VLN ++P PT+P I + + + P LP+++ + +T
Sbjct: 412 VLNRFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTD 471
Query: 179 INPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQM--- 222
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 472 IRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMNFV 531
Query: 223 ---AALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFP 279
LN+ +P P+P A++P + P+ L A+ S Y+P
Sbjct: 532 LMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIP---TEAAIYQPSLLLNPRALQPSTAYYP 588
Query: 280 Q-FQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGNP 337
QL +N + P P +P L FP L+ P P PG
Sbjct: 589 AGTQLFMNYTAYY-------------PSPPGSPNSLGYFPTAANLSSVP-----PQPGTV 630
Query: 338 VALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 631 VRMQGLAYNTGVKEILNFFQGYQ 653
>gi|324510500|gb|ADY44391.1| RNA-binding protein sym-2, partial [Ascaris suum]
Length = 603
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 153/225 (68%), Gaps = 35/225 (15%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLSA GRRNGEA+VRF + E R++ALKRH+H + RYIEV +A GEDF+ VA G+
Sbjct: 199 GGVALCLSAEGRRNGEALVRFEESEQRELALKRHRHFLHNRYIEVYRATGEDFLQVAAGS 258
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++EA F++RG +I+RMRGLPY+CT Q+ +FF +G +N C VM+G G+LFV K DG+
Sbjct: 259 SSEAVRFVSRGGAMIVRMRGLPYDCTEAQIREFFASG-DNGCTVMEG--GILFVNKSDGR 315
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFV+F+ E AL+KHK +IG RYIELFRST AEVQQV+N+++E
Sbjct: 316 PTGDAFVMFDDEAAGQLALTKHKHTIGSRYIELFRSTQAEVQQVVNRSLE---------- 365
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
S Q ++ G RKDCIRLRGLPYEA
Sbjct: 366 ----SVQ------------------VVVQGNRKDCIRLRGLPYEA 388
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 83/134 (61%), Gaps = 25/134 (18%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE+I+EFLG+ A +IV+QGVHMVYN+QG PSGEAFIQMDSE SA AA + HN+ M GK
Sbjct: 390 VENIVEFLGDAARHIVFQGVHMVYNAQGHPSGEAFIQMDSEISAATAAAIAHNKYMQIGK 449
Query: 122 KQRYIEVFQCSGEDMNLVL---------------------NGVLP----PTSPAISPVGK 156
KQRYIEVFQCS EDMNLV+ G++P P +P P
Sbjct: 450 KQRYIEVFQCSPEDMNLVITSPPLPPQLVLPPRPIYPQPVTGIVPTLIAPFTPVYWPYPS 509
Query: 157 TLLSPGMLPHSSQP 170
+SP + P SQP
Sbjct: 510 PPVSPNVYPLPSQP 523
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ + GR G+A V F D+ +AL +HKH I RYIE+ ++ + V +
Sbjct: 304 GGILFVNKSDGRPTGDAFVMFDDEAAGQLALTKHKHTIGSRYIELFRSTQAEVQQVVNRS 363
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
Q + + IR+RGLPYE + +++F + +GV V G
Sbjct: 364 LESVQVVVQGNRKDCIRLRGLPYEAHVENIVEFLGDAARHIVF-----QGVHMVYNAQGH 418
Query: 486 ATGDAFVLFEKE-EEADKALSKHKESIGI----RYIELFRSTTAEVQQVLNK 532
+G+AF+ + E A A H + + I RYIE+F+ + ++ V+
Sbjct: 419 PSGEAFIQMDSEISAATAAAIAHNKYMQIGKKQRYIEVFQCSPEDMNLVITS 470
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ V++R RGLP++ T V FF N+ G GV +G+ G+A V FE+
Sbjct: 169 SAVVVRARGLPWQATDHDVAQFFVG-----LNIAPG--GVALCLSAEGRRNGEALVRFEE 221
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
E+ + AL +H+ + RYIE++R+T + QV
Sbjct: 222 SEQRELALKRHRHFLHNRYIEVYRATGEDFLQV 254
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 64 HILEFL--GEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
I EF G+ ++ G+ V S G+P+G+AF+ D E + LA L +++ I
Sbjct: 287 QIREFFASGDNGCTVMEGGILFVNKSDGRPTGDAFVMFDDEAAGQLA--LTKHKHTI--- 341
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQ 169
RYIE+F+ + ++ V+N L + K + LP+ +
Sbjct: 342 GSRYIELFRSTQAEVQQVVNRSLESVQVVVQGNRKDCIRLRGLPYEAH 389
>gi|149061069|gb|EDM11679.1| similar to hypothetical protein FLJ20171 (predicted) [Rattus
norvegicus]
Length = 604
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 157/239 (65%), Gaps = 26/239 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP-------- 420
Query: 546 NNGLSAQQPMLSHLAQVP-VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L L P +P LPQ + +DC+RLRGLPY A + DI F+G+
Sbjct: 421 ----------LIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNE--------------AQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + +R+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|443682871|gb|ELT87306.1| hypothetical protein CAPTEDRAFT_189098 [Capitella teleta]
Length = 639
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 141/164 (85%), Gaps = 5/164 (3%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GRRNGEA++RF +EHRD+AL++HKHH+ +RYIEV +A+G+DF+N+AGGNN EAQAFL+R
Sbjct: 211 GRRNGEALIRFESKEHRDLALRKHKHHLGQRYIEVYRASGKDFLNIAGGNNTEAQAFLSR 270
Query: 436 ----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
G QVI+RMRGLPY CTA+QV++FF G E S V+DG+EG+LFV + DG+ATGDAF
Sbjct: 271 HSDSGNQVIVRMRGLPYTCTAEQVLEFFRQG-EQSVEVLDGDEGILFVHQADGRATGDAF 329
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
VLF +++A +ALSKH+ESIG RYIELF+STTAEVQQVLN++M+
Sbjct: 330 VLFANDDDATRALSKHRESIGTRYIELFKSTTAEVQQVLNRSMD 373
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 44/167 (26%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +IR RGLP++ + + + FF+ L + G+ G+A + FE +
Sbjct: 180 ECVIRARGLPWQSSDQDIARFFQG---------------LNIANQQGRRNGEALIRFESK 224
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
E D AL KHK +G RYIE++R++ + + + N AQ
Sbjct: 225 EHRDLALRKHKHHLGQRYIEVYRASGKDFLNI--------------AGGNNTEAQ----- 265
Query: 558 HLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVGQQ 603
+L +H + + +R+RGLPY +++ F G+Q
Sbjct: 266 -------AFLSRH--SDSGNQVIVRMRGLPYTCTAEQVLEFFRQGEQ 303
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 150/409 (36%), Gaps = 117/409 (28%)
Query: 62 VEHILEFL--GEFASNIVY--QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNM 117
E +LEF GE + ++ +G+ V+ + G+ +G+AF+ ++ A A L +R
Sbjct: 291 AEQVLEFFRQGEQSVEVLDGDEGILFVHQADGRATGDAFVLFANDDDATRA--LSKHRES 348
Query: 118 IFGKKQRYIEVF------------------------------------------------ 129
I RYIE+F
Sbjct: 349 I---GTRYIELFKSTTAEVQQVLNRSMDPRTPSTETEAILPPLLPQIPTSPGLGGLLLPQ 405
Query: 130 QCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP---LYPQHNTQINPGLSHL 186
QCSGEDMNLVL LP A P + P MLP S P + I+PG + L
Sbjct: 406 QCSGEDMNLVLTSGLPQMGMAAPPASQ----PAMLPSVSIPNAAAFMPKPFGISPGSTML 461
Query: 187 DPLVNVHLTQALAQAQYAKSQQDNLML-MNQIAAQQMAALNKPHNMALNGHTPTLIPAPS 245
P +N LA A A +L QIAA Q + M+ L P
Sbjct: 462 SPHMN------LAAASGAFPTPSSLYSPYTQIAAAQPSLAMSTQAMS------ALTPNGG 509
Query: 246 PNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMP 305
A P L ++ST + A P + GY P + P
Sbjct: 510 LGAFAQPGLPARSTPL-----AAGTYPGTNGY--------------------QPVMYWYP 544
Query: 306 RMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGL 365
PV+PQ + ++QT T+ G P N+ ++ +L G ++
Sbjct: 545 SPPVSPQ-----SAYYVSQTQCPTTVVIKGLPF-------NVQVADILAFFEGIYEM--Q 590
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMAL-KRHKHHIDKRYIEVTKA 413
V + + GR GEA + F + + A+ +R++ I R++E+ A
Sbjct: 591 PDVQVQRGSDGRLTGEAYITFGSRSEAERAITERNRKVIGNRFVEMFMA 639
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+ ++ FFE + + + V + DG+ TG+A++ F EA
Sbjct: 565 VVIKGLPFNVQVADILAFFEG-------IYEMQPDVQVQRGSDGRLTGEAYITFGSRSEA 617
Query: 501 DKALS-KHKESIGIRYIELF 519
++A++ ++++ IG R++E+F
Sbjct: 618 ERAITERNRKVIGNRFVEMF 637
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV--LITSQYKEPIQGFK 58
V F ATAG G LGSDE++I+L +Y++ D NK + S+ P G K
Sbjct: 10 VLFCATAGQNGENLGSDEEQIVLFVYLLYDLANNKFEHFLKSKEWHPRHGGK 61
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 78 YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMN 137
+QG+++ N QG+ +GEA I+ +S+ LA LR +++ + QRYIEV++ SG+D
Sbjct: 201 FQGLNIA-NQQGRRNGEALIRFESKEHRDLA--LRKHKHHL---GQRYIEVYRASGKDFL 254
Query: 138 LVLNG 142
+ G
Sbjct: 255 NIAGG 259
>gi|355686615|gb|AER98118.1| epithelial splicing regulatory protein 1 [Mustela putorius furo]
Length = 561
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 156/239 (65%), Gaps = 26/239 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 161 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 220
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 221 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 276
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 277 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP-------- 328
Query: 546 NNGLSAQQPMLSHLAQVP-VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L L P +P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 329 ----------LIPLPTPPMIPVLPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 375
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 366 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 421
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 422 KDRYVEVFQCSAEEMNFVLMG 442
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 263 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 322
Query: 424 GNNNE--------------AQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 323 RFSSAPLIPLPTPPMIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 379
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 380 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 437
Query: 528 QVL 530
VL
Sbjct: 438 FVL 440
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 133 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 185
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 186 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 241
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 242 PFTATADEV-VAFFGQHCPITGGKE 265
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 157 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 211
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 212 DFLKIAGGT 220
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 65/322 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ +RYIE+F+ + ++
Sbjct: 265 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL---GKRYIELFRSTAAEVQQ 319
Query: 139 VLNG-----VLP-PTSPAISPVGKTLLSPG---------MLPHSSQ-----PLYPQHNTQ 178
VLN ++P PT P I + + + P LP+++ + +T
Sbjct: 320 VLNRFSSAPLIPLPTPPMIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFSTD 379
Query: 179 INPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQM--- 222
I H+ D + + AQ + K+ +D + + Q +A++M
Sbjct: 380 IRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFV 439
Query: 223 ---AALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFP 279
LN+ +P P+P A++P ++ N AL PT+ Y
Sbjct: 440 LMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQ--PTTAYYPA 497
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGNPV 338
QL +N + P P +P L FP L+ P P PG V
Sbjct: 498 GTQLFMNYTAYY-------------PSPPGSPNSLGYFPTAANLSGVP-----PQPGTVV 539
Query: 339 ALCPLVQNIWLSLLLNTIPGYE 360
+ L N + +LN GY+
Sbjct: 540 RMQGLAYNTGVKEILNFFQGYQ 561
>gi|348500206|ref|XP_003437664.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Oreochromis niloticus]
Length = 741
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 154/225 (68%), Gaps = 16/225 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T ++V+ F G E+ V DG EG+LFVK PDG+
Sbjct: 312 SNEVAQFLSKENQVIIRMRGLPFTATPQEVLAFL--GPESP--VTDGTEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P ++L S
Sbjct: 368 PTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPPS 427
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P+LP + + +DC+RLRGLPY A
Sbjct: 428 PIVPVP--------VLTTPPFLP----AASSTRDCVRLRGLPYTA 460
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 13/101 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 462 IEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSPDKAFMVAQKCHKKTM---- 517
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISP 153
K RY+EVFQCS E+M++VL +G+ PP P +SP
Sbjct: 518 KDRYVEVFQCSTEEMSIVLMGGTLNRSGLSPPPCKLPCLSP 558
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED------------FINVAG 423
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + I+
Sbjct: 366 GRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 425
Query: 424 GNNNEAQAFLT--------RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
+ LT + +R+RGLPY + +++F E++ ++ G
Sbjct: 426 PSPIVPVPVLTTPPFLPAASSTRDCVRLRGLPYTAGIEDILEFM---GEHTVDIKP--HG 480
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
V V G+ +GDAF+ + ++A K HK+++ RY+E+F+ +T E+ VL
Sbjct: 481 VHMVLNQQGRPSGDAFIQMKSPDKAFMVAQKCHKKTMKDRYVEVFQCSTEEMSIVL 536
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 222 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFIN 274
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL-- 549
E D AL +HK +G RYIE++++T E ++ T L K N + GL
Sbjct: 275 SEHRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPF 334
Query: 550 -SAQQPMLSHLAQVPVPYLPQHIITSGT 576
+ Q +L+ L P+ +T GT
Sbjct: 335 TATPQEVLAFLG-------PESPVTDGT 355
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+EIILL++ I+D + KV
Sbjct: 10 VFFGATAGENGGKLGSDEREIILLVWQIVDLHEKKV 45
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 153/399 (38%), Gaps = 68/399 (17%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 339 QEVLAFLGPESPVTDGTEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALK-KHKQ--ILGK 395
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKT-------LLSPGMLPHSSQP---- 170
RYIE+F+ + ++ VLN + ++P IS + + L +P LP +S
Sbjct: 396 --RYIELFRSTAAEVQQVLNRYM--STPLISTLPPSPIVPVPVLTTPPFLPAASSTRDCV 451
Query: 171 ----------------LYPQHNTQINPGLSHL----------DPLVNVHLTQA---LAQA 201
+H I P H+ D + + +AQ
Sbjct: 452 RLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSPDKAFMVAQK 511
Query: 202 QYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTP--TLIPAPSPNAL-----MPPPL 254
+ K+ +D + + Q + ++M+ + + +G +P +P SP PP +
Sbjct: 512 CHKKTMKDRYVEVFQCSTEEMSIVLMGGTLNRSGLSPPPCKLPCLSPPTAYAAFPTPPAI 571
Query: 255 NSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVL 314
S++ L A P P + + P L HL MN + P PV+P +
Sbjct: 572 LSEAALYQPPLLAAPRPPQTTTHSPAHTLAYYPPQPHLYMNMNMNYTAYYPSPPVSPSTV 631
Query: 315 PKFPVHQLNQTPTVY-----------TIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVL 363
F +P PG V + L N + +L+ GY+ L
Sbjct: 632 GYFAAPPAVAAAVAAQPHHAAAAASPVLPQPGALVRMQGLPYNTGVKDILSFFQGYQ--L 689
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHH 402
V + + G+ +GEA++ F +E A+ +H
Sbjct: 690 QPDAVLILYNFSGQCSGEALITFPSEEIARRAVAERSNH 728
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ ++SEH A RH +M RYIEV++ +G
Sbjct: 248 NIAKGGVALCLNAQGRRNGEALVRFINSEHRDL--ALERHKHHM----GSRYIEVYKATG 301
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 302 EEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATP 338
>gi|170587834|ref|XP_001898679.1| fusilli [Brugia malayi]
gi|158593949|gb|EDP32543.1| fusilli, putative [Brugia malayi]
Length = 467
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 154/235 (65%), Gaps = 40/235 (17%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCLS GRRNGEA+VRF D E R++ALKRH+H + RYIEV +A G DF+ VA
Sbjct: 51 IAAGGVALCLSPEGRRNGEALVRFEDSEQRELALKRHRHFLHNRYIEVYRATGSDFLQVA 110
Query: 423 GGNNNEAQAFLTRGAQ--VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
G+N+EA F++RG+ +I+RMRGLPY+CT Q+++FF G EN C V DG G+LFV
Sbjct: 111 AGSNSEAVRFVSRGSTGAMIVRMRGLPYDCTEAQILEFFAEG-ENGCKVTDG--GILFVN 167
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF-----RSTTAEVQQVLNKTME 535
K DG+ TGDAFV+F+ EE KAL+KHK +IG RYIELF RST AEVQQV+N+ +E
Sbjct: 168 KSDGRPTGDAFVMFDNEEAGQKALTKHKRTIGTRYIELFRQLNYRSTQAEVQQVVNRNLE 227
Query: 536 LPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ Q M+ H +RKDCIRLRGLPYEA
Sbjct: 228 ---------------SDQRMMVH---------------GSSRKDCIRLRGLPYEA 252
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 65/116 (56%), Gaps = 34/116 (29%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE+I+EFLGE A +I++Q MDSE SA AA L HN+ M GK
Sbjct: 254 VENIVEFLGETARHIMFQ-------------------MDSEMSAATAAALAHNKYMQIGK 294
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNT 177
KQRYIEVFQCS ED+NLVL T+P + P + +L P +PL+PQ +
Sbjct: 295 KQRYIEVFQCSPEDINLVL------TNPPLPP--QFILQP-------RPLFPQRKS 335
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++VI+R RGLP++ T + FF N+ G GV P+G+ G+A V FE
Sbjct: 24 SEVIVRTRGLPWQATDHDIAQFFIG-----LNIAAG--GVALCLSPEGRRNGEALVRFED 76
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
E+ + AL +H+ + RYIE++R+T ++ QV
Sbjct: 77 SEQRELALKRHRHFLHNRYIEVYRATGSDFLQV 109
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV-----TKANGEDFIN 420
GG+ + GR G+A V F ++E AL +HK I RYIE+ ++ +
Sbjct: 161 GGILFVNKSDGRPTGDAFVMFDNEEAGQKALTKHKRTIGTRYIELFRQLNYRSTQAEVQQ 220
Query: 421 VAGGNNNEAQAFLTRGA--QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE 473
V N Q + G+ + IR+RGLPYE + +++F + MD E
Sbjct: 221 VVNRNLESDQRMMVHGSSRKDCIRLRGLPYEAHVENIVEFLGETARHIMFQMDSE 275
>gi|335286312|ref|XP_003125612.2| PREDICTED: epithelial splicing regulatory protein 1-like isoform 1
[Sus scrofa]
Length = 681
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ +T +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVTPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVLLNP 581
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+T + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVTPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 126/325 (38%), Gaps = 67/325 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLN----------------GVLPPTSPAISPVGKTLLSPGMLPHSSQ-----PLYPQHNT 177
VLN VLP + V + G LP+++ + +T
Sbjct: 412 VLNRFSSAPLIPLPTPPIIPVLPQQFVTPTNVRDCIRLRG-LPYAATIEDILDFLGEFST 470
Query: 178 QINPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQMAA 224
I H+ D + + AQ + K+ +D + + Q +A++M
Sbjct: 471 DIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEM-- 528
Query: 225 LNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQF 281
N L G T + N L PPP + P+ PA AV PT Y P
Sbjct: 529 -----NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSV 577
Query: 282 QL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPG 335
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 578 LLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVP-----PQPG 632
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 633 TVVRMQGLAYNTGVKEILNFFQGYQ 657
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|335286314|ref|XP_003355068.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 2
[Sus scrofa]
Length = 608
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ +T +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVTPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVLLNP 581
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+T + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVTPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|348526958|ref|XP_003450986.1| PREDICTED: epithelial splicing regulatory protein 1 [Oreochromis
niloticus]
Length = 738
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 168/250 (67%), Gaps = 22/250 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF+ +EHR++AL+RHKHH+ RYIEV KA G+DF+ +AGG
Sbjct: 278 GGVALCLNAQGRRNGEALVRFVSEEHRELALQRHKHHMGNRYIEVYKATGDDFLKIAGGT 337
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF--EAGTENSCNVMDGEEGVLFVKKPD 483
++E FL+R Q+I+RMRGLP+ T +QV+ FF E + +C V G++G+LFV+ PD
Sbjct: 338 SHEVAMFLSREDQIIVRMRGLPFTATHEQVLAFFSPEDELKETCPVSGGKDGILFVRYPD 397
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TGDAFVLF EE A AL KHKE +G RYIELF+ST AEVQQVLN+ P L
Sbjct: 398 GRPTGDAFVLFACEEHAQCALRKHKEILGKRYIELFKSTAAEVQQVLNRYSSTP----LI 453
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
S + P+L ++ +P P G +DC+RLRGLPY A + DI F+G+
Sbjct: 454 SV--APAPLMPVLPTMSLLPPP---------GGVRDCLRLRGLPYTA--SIEDILTFLGE 500
Query: 603 --QDSFVHKV 610
QD H V
Sbjct: 501 FTQDIRPHGV 510
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF-- 119
+E IL FLGEF +I GVHMV N QG+PSG+ FIQM S A A+Q H M
Sbjct: 491 IEDILTFLGEFTQDIRPHGVHMVLNQQGRPSGDCFIQMTSAERALQASQRLHKHVMSSQR 550
Query: 120 GKKQRYIEVFQCSGEDMNLVLNG 142
G RY+EVF CS E+M LVL G
Sbjct: 551 GANSRYVEVFPCSAEEMGLVLMG 573
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 33/193 (17%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +EH AL++HK + KRYIE+ K+ + V
Sbjct: 386 GKDGILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGKRYIELFKSTAAEVQQVL- 444
Query: 424 GNNNEAQAFLT-------------------RGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
N + ++ G + +R+RGLPY + + ++ F T+
Sbjct: 445 -NRYSSTPLISVAPAPLMPVLPTMSLLPPPGGVRDCLRLRGLPYTASIEDILTFLGEFTQ 503
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLF---EKEEEADKALSKH----KESIGIRYIE 517
+ GV V G+ +GD F+ E+ +A + L KH + RY+E
Sbjct: 504 DI-----RPHGVHMVLNQQGRPSGDCFIQMTSAERALQASQRLHKHVMSSQRGANSRYVE 558
Query: 518 LFRSTTAEVQQVL 530
+F + E+ VL
Sbjct: 559 VFPCSAEEMGLVL 571
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF N+ G GV G+ G+A V F EE
Sbjct: 250 TVIRARGLPWQSSDQDIARFFRG-----LNIAKG--GVALCLNAQGRRNGEALVRFVSEE 302
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ AL +HK +G RYIE++++T + ++ T
Sbjct: 303 HRELALQRHKHHMGNRYIEVYKATGDDFLKIAGGT 337
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +G+
Sbjct: 274 NIAKGGVALCLNAQGRRNGEALVRFVSEEHRELALQ-RHKHHM----GNRYIEVYKATGD 328
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 329 DFLKIAGGT 337
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Query: 5 QYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLI 46
Y V F AT+G G+LLGSDE+E++ L++ ++D VN++LI
Sbjct: 6 DYLVVVFTATSGASGDLLGSDEKELVQLVWQLVDVKNKKLGKVNELLI 53
>gi|334326246|ref|XP_001379501.2| PREDICTED: epithelial splicing regulatory protein 1 [Monodelphis
domestica]
Length = 677
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 158/238 (66%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRF------------ 416
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ P++ +P LPQ +T +DCIRLRGLPY A + DI F+G+
Sbjct: 417 -----SSTPLIPLPTPPIIPVLPQQFVTPTNVRDCIRLRGLPYAA--TIEDILEFLGE 467
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF++ I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILEFLGEFSTAIQTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSTPLIPLPT 426
Query: 430 --------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+T + IR+RGLPY T + +++F E S + GV V
Sbjct: 427 PPIIPVLPQQFVTPTNVRDCIRLRGLPYAATIEDILEFL---GEFSTAIQ--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ + + QH +G ++
Sbjct: 335 --FTATAEEVLAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|74183823|dbj|BAE24496.1| unnamed protein product [Mus musculus]
Length = 680
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 368 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 416
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 417 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 466
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 457 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 512
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 573 -QPSLLLNP 580
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 354 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 413
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 414 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 470
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 471 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 528
Query: 528 QVL 530
VL
Sbjct: 529 FVL 531
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 224 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 276
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 277 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 334 --FTATAEEVVAFFGQHCPITGGKE 356
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 336
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 67/325 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR ++ ++ GK RYIE+F+ + ++
Sbjct: 356 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKELL-GK--RYIELFRSTAAEVQQ 410
Query: 139 VLN----------------GVLPPTSPAISPVGKTLLSPGMLPHSSQ-----PLYPQHNT 177
VLN VLP + V + G LP+++ + +T
Sbjct: 411 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRG-LPYAATIEDILDFLGEFST 469
Query: 178 QINPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQMAA 224
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 470 DIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEM-- 527
Query: 225 LNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQF 281
N L G T + N L PPP + P+ PA AV PT Y P
Sbjct: 528 -----NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIYQPSL 576
Query: 282 QL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPG 335
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 577 LLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSSVP-----PQPG 631
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 632 TVVRMQGLAYNTGVKEILNFFQGYQ 656
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|229462862|sp|Q3US41.2|ESRP1_MOUSE RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
Length = 680
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 368 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 416
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 417 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 466
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 457 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 512
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 573 -QPSLLLNP 580
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 354 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 413
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 414 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 470
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 471 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 528
Query: 528 QVL 530
VL
Sbjct: 529 FVL 531
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 224 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 276
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 277 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 334 --FTATAEEVVAFFGQHCPITGGKE 356
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 336
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 67/325 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR ++ ++ GK RYIE+F+ + ++
Sbjct: 356 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKELL-GK--RYIELFRSTAAEVQQ 410
Query: 139 VLN----------------GVLPPTSPAISPVGKTLLSPGMLPHSSQ-----PLYPQHNT 177
VLN VLP + V + G LP+++ + +T
Sbjct: 411 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRG-LPYAATIEDILDFLGEFST 469
Query: 178 QINPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQMAA 224
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 470 DIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEM-- 527
Query: 225 LNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQF 281
N L G T + N L PPP + P+ PA AV PT Y P
Sbjct: 528 -----NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIYQPSL 576
Query: 282 QL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPG 335
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 577 LLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSSVP-----PQPG 631
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 632 TVVRMQGLAYNTGVKEILNFFQGYQ 656
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|165972311|ref|NP_918944.2| epithelial splicing regulatory protein 1 [Mus musculus]
Length = 681
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSLLLNP 581
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 67/325 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR ++ ++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKELL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLN----------------GVLPPTSPAISPVGKTLLSPGMLPHSSQ-----PLYPQHNT 177
VLN VLP + V + G LP+++ + +T
Sbjct: 412 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRG-LPYAATIEDILDFLGEFST 470
Query: 178 QINPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQMAA 224
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 471 DIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEM-- 528
Query: 225 LNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQF 281
N L G T + N L PPP + P+ PA AV PT Y P
Sbjct: 529 -----NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIYQPSL 577
Query: 282 QL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPG 335
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 578 LLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSSVP-----PQPG 632
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 633 TVVRMQGLAYNTGVKEILNFFQGYQ 657
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|21618692|gb|AAH31468.1| RNA binding motif protein 35A [Mus musculus]
Length = 444
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 93 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 152
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 153 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 208
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 209 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 257
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 258 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 307
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 298 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 353
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 354 KDRYVEVFQCSAEEMNFVLMG 374
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 195 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 254
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 255 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 311
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 312 IRT--HGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 369
Query: 528 QVL 530
VL
Sbjct: 370 FVL 372
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 65 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 117
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 118 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 174
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 175 --FTATAEEVVAFFGQHCPITGGKE 197
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 89 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 143
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 144 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 177
>gi|296803341|gb|ADH51734.1| ESRP1/RAF1 fusion protein [Homo sapiens]
Length = 1061
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 158/241 (65%), Gaps = 24/241 (9%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +A
Sbjct: 250 IAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIA 309
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG +NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV P
Sbjct: 310 GGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYP 365
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 366 DGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS-------- 417
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVG 601
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G
Sbjct: 418 -------SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLG 466
Query: 602 Q 602
+
Sbjct: 467 E 467
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVILNP 581
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|37747755|gb|AAH59280.1| Rbm35a protein, partial [Mus musculus]
Length = 490
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 158/241 (65%), Gaps = 24/241 (9%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +A
Sbjct: 132 IAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIA 191
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG +NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV P
Sbjct: 192 GGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYP 247
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 248 DGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS-------- 299
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVG 601
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G
Sbjct: 300 -------SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLG 348
Query: 602 Q 602
+
Sbjct: 349 E 349
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 340 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 395
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 396 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 455
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 456 -QPSLLLNP 463
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 237 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 296
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 297 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 353
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 354 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 411
Query: 528 QVL 530
VL
Sbjct: 412 FVL 414
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 107 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 159
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 160 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 216
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 217 --FTATAEEVVAFFGQHCPITGGKE 239
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 131 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 185
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 186 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 219
>gi|148673702|gb|EDL05649.1| RNA binding motif protein 35A, isoform CRA_a [Mus musculus]
Length = 483
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 128 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 187
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 188 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 243
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 244 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 292
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 293 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 342
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 333 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 388
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 389 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 448
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 449 -QPSLLLNP 456
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 230 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 289
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 290 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 346
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 347 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 404
Query: 528 QVL 530
VL
Sbjct: 405 FVL 407
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 100 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 152
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 153 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 209
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 210 --FTATAEEVVAFFGQHCPITGGKE 232
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 124 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 178
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 179 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 212
>gi|148673703|gb|EDL05650.1| RNA binding motif protein 35A, isoform CRA_b [Mus musculus]
Length = 604
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|441647515|ref|XP_003268407.2| PREDICTED: epithelial splicing regulatory protein 1 [Nomascus
leucogenys]
Length = 821
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 415 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 474
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 475 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 530
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 531 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 579
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 580 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 629
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 620 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 675
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 676 KDRYVEVFQCSAEEMNFVLMG 696
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 517 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 576
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E + +
Sbjct: 577 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFATD 633
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 634 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMN 691
Query: 528 QVL 530
VL
Sbjct: 692 FVL 694
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 387 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 439
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 440 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 495
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 496 PFTATAEEV-VAFFGQHCPITGGKE 519
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 411 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 465
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 466 DFLKIAGGT 474
>gi|417412369|gb|JAA52574.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 701
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 273 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 333 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 389 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 437
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 438 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 487
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 478 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 534 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 593
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 594 -QPSLLLNP 601
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 375 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 434
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 435 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 491
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 492 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 549
Query: 528 QVL 530
VL
Sbjct: 550 FVL 552
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 245 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 297
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 298 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 354
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 355 --FTATAEEVVAFFGQHCPITGGKE 377
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 269 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 324 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 357
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 25 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 65
>gi|395818385|ref|XP_003782611.1| PREDICTED: epithelial splicing regulatory protein 1 [Otolemur
garnettii]
Length = 665
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 241 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 300
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 301 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 356
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 357 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 405
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 406 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 455
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 446 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 501
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 502 KDRYVEVFQCSAEEMNFVLMG 522
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 355 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 414
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 415 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 469
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 470 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 520
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 213 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 265
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 266 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 322
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 323 --FTATAEEVVAFFGQHCPITGGKE 345
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 237 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 291
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 292 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 325
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|119612126|gb|EAW91720.1| RNA binding motif protein 35A, isoform CRA_a [Homo sapiens]
Length = 503
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 93 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 152
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 153 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 208
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 209 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 257
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 258 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 307
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 298 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 353
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 354 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 413
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 414 -QPSVILNP 421
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 195 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 254
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E + +
Sbjct: 255 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFATD 311
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 312 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMN 369
Query: 528 QVL 530
VL
Sbjct: 370 FVL 372
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 65 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 117
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 118 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 174
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 175 --FTATAEEVVAFFGQHCPITGGKE 197
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 89 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 143
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 144 DFLKIAGGT 152
>gi|393909284|gb|EFO25784.2| hypothetical protein LOAG_02706 [Loa loa]
Length = 229
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 152/229 (66%), Gaps = 35/229 (15%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GG+ALCLS GRRNGEA+VRF D E R++AL+RH+H + RYIEV +A DF+ +A
Sbjct: 4 GSGGIALCLSPEGRRNGEALVRFEDSEQRELALRRHRHFLHNRYIEVYRATRNDFLQIAA 63
Query: 424 GNNNEAQAFLTRGAQ--VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G+N+EA F++RG+ +I+RMRGLPY+CT Q+++FF G EN C V DG G+LFV K
Sbjct: 64 GSNSEAVRFVSRGSTGAMIVRMRGLPYDCTEAQILEFFAEG-ENGCKVTDG--GILFVNK 120
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
DG+ TGDAFV+F+ EE KAL+KHK +IG RYIELFRST AEVQQV+N+ +E
Sbjct: 121 SDGRPTGDAFVMFDSEEAGQKALTKHKRTIGTRYIELFRSTQAEVQQVVNRNLE------ 174
Query: 542 LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
Q M+ H +RKDCIRLRGLPYEA
Sbjct: 175 ---------NDQRMIVH---------------GSSRKDCIRLRGLPYEA 199
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ + GR G+A V F +E AL +HK I RYIE+ ++ + V N
Sbjct: 113 GGILFVNKSDGRPTGDAFVMFDSEEAGQKALTKHKRTIGTRYIELFRSTQAEVQQVVNRN 172
Query: 426 NNEAQAFLTRGA--QVIIRMRGLPYECTAKQVIDFF 459
Q + G+ + IR+RGLPYE + +++F
Sbjct: 173 LENDQRMIVHGSSRKDCIRLRGLPYEAHVENIVEFL 208
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G G+ P+G+ G+A V FE E+ + AL +H+ + RYIE++R+T + Q+
Sbjct: 3 EGSGGIALCLSPEGRRNGEALVRFEDSEQRELALRRHRHFLHNRYIEVYRATRNDFLQI 61
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 65 ILEFL--GEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
ILEF GE + G+ V S G+P+G+AF+ DSE + A +H R +
Sbjct: 97 ILEFFAEGENGCKVTDGGILFVNKSDGRPTGDAFVMFDSEEAGQ-KALTKHKRTI----G 151
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ V+N
Sbjct: 152 TRYIELFRSTQAEVQQVVN 170
>gi|417412339|gb|JAA52559.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 697
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 273 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 333 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 389 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 437
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 438 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 487
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 478 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 534 KDRYVEVFQCSAEEMNFVLMG 554
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 375 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 434
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 435 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 491
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 492 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 549
Query: 528 QVL 530
VL
Sbjct: 550 FVL 552
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 245 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 297
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 298 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 354
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 355 --FTATAEEVVAFFGQHCPITGGKE 377
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 269 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 324 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 357
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 25 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 65
>gi|417412016|gb|JAA52424.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 627
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 273 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 333 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 389 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 437
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 438 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 487
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 478 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 534 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 593
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 594 -QPSLLLNP 601
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 375 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 434
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 435 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 491
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 492 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 549
Query: 528 QVL 530
VL
Sbjct: 550 FVL 552
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 245 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 297
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 298 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 354
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 355 --FTATAEEVVAFFGQHCPITGGKE 377
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 269 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 324 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 357
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 25 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 65
>gi|355698103|gb|EHH28651.1| RNA-binding protein 35A [Macaca mulatta]
gi|355779831|gb|EHH64307.1| RNA-binding protein 35A [Macaca fascicularis]
Length = 681
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVILNP 581
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|348588462|ref|XP_003479985.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 1
[Cavia porcellus]
Length = 681
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAMY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVLLNP 581
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 129/342 (37%), Gaps = 66/342 (19%)
Query: 62 VEHILEFLGEFAS-NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
E ++ F G+ +G+ V G+P+G+AF+ E Y LR +++++ G
Sbjct: 339 AEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-G 395
Query: 121 KKQRYIEVFQCSGEDMNLVLNGV---------------------LPPTS----------P 149
K RYIE+F+ + ++ VLN +PPT+ P
Sbjct: 396 K--RYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLP 453
Query: 150 AISPVGKTLLSPGMLPHS--SQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQ 207
+ + L G + ++ N Q P + + AQ + K+
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 208 QDNLMLMNQIAAQQMAALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLP 266
+D + + Q +A++M N L G T + N L PPP + P+ P
Sbjct: 514 KDRYVEVFQCSAEEM-------NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFP 560
Query: 267 ALPAV-PTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPV 319
A AV PT Y P L P + + P T F N P P +P L FP
Sbjct: 561 APAAVIPTEAAMYQPSVLLNPRALPPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPT 620
Query: 320 H-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L+ P P PG V + L N + +LN GY+
Sbjct: 621 AASLSSVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 657
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|56790297|ref|NP_060167.2| epithelial splicing regulatory protein 1 isoform 1 [Homo sapiens]
gi|124020999|sp|Q6NXG1.2|ESRP1_HUMAN RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|119612127|gb|EAW91721.1| RNA binding motif protein 35A, isoform CRA_b [Homo sapiens]
gi|127799385|gb|AAH67098.2| Epithelial splicing regulatory protein 1 [Homo sapiens]
Length = 681
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVILNP 581
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|127799644|gb|AAH99916.2| Epithelial splicing regulatory protein 1 [Homo sapiens]
Length = 677
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|34192605|gb|AAH19932.1| ESRP1 protein [Homo sapiens]
Length = 656
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 301 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 360
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 361 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 416
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 417 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 465
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 466 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 515
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 506 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 561
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 562 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 621
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 622 -QPSVILNP 629
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 403 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 462
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 463 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 522
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 523 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 576
Query: 527 QQVL 530
VL
Sbjct: 577 NFVL 580
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 273 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 325
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 326 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 382
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 383 --FTATAEEVVAFFGQHCPITGGKE 405
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 297 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 351
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 352 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 385
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 53 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 93
>gi|395739900|ref|XP_003777336.1| PREDICTED: epithelial splicing regulatory protein 1 [Pongo abelii]
Length = 677
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|296226947|ref|XP_002807679.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 1 [Callithrix jacchus]
Length = 676
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E + +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFATD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|170763525|ref|NP_001030087.2| epithelial splicing regulatory protein 1 isoform 2 [Homo sapiens]
gi|332830836|ref|XP_003311899.1| PREDICTED: epithelial splicing regulatory protein 1 [Pan
troglodytes]
Length = 677
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|348588464|ref|XP_003479986.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 2
[Cavia porcellus]
Length = 659
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 121/322 (37%), Gaps = 65/322 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNGV---------------------LPPTS----------PAISPVGKTLLSPGMLPHS 167
VLN +PPT+ P + + L G
Sbjct: 412 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFSTD 471
Query: 168 --SQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQM--- 222
+ ++ N Q P + + AQ + K+ +D + + Q +A++M
Sbjct: 472 IRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFV 531
Query: 223 ---AALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFP 279
LN+ +P P+P A++P ++ N ALP P++ Y
Sbjct: 532 LMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIPTEAAMYQPSVLLNPRALP--PSTAYYPA 589
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGNPV 338
QL +N + P P +P L FP L+ P P PG V
Sbjct: 590 GTQLFMNYTAYY-------------PSPPGSPNSLGYFPTAASLSSVP-----PQPGTVV 631
Query: 339 ALCPLVQNIWLSLLLNTIPGYE 360
+ L N + +LN GY+
Sbjct: 632 RMQGLAYNTGVKEILNFFQGYQ 653
>gi|344273261|ref|XP_003408442.1| PREDICTED: epithelial splicing regulatory protein 1 [Loxodonta
africana]
Length = 677
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLVWEVVDLANKKV 45
>gi|170763527|ref|NP_001116297.1| epithelial splicing regulatory protein 1 isoform 4 [Homo sapiens]
Length = 608
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVILNP 581
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|297683323|ref|XP_002819332.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Pongo abelii]
Length = 659
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|403295784|ref|XP_003938806.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 676
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|426360257|ref|XP_004047364.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 677
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGARLGSDEKELILLFWKVVDLANKKV 45
>gi|281352677|gb|EFB28261.1| hypothetical protein PANDA_016305 [Ailuropoda melanoleuca]
Length = 656
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|426360259|ref|XP_004047365.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 659
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGARLGSDEKELILLFWKVVDLANKKV 45
>gi|170763529|ref|NP_001116298.1| epithelial splicing regulatory protein 1 isoform 3 [Homo sapiens]
gi|114620965|ref|XP_001143826.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1 [Pan
troglodytes]
Length = 659
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|402878741|ref|XP_003903031.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Papio anubis]
Length = 659
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|402878739|ref|XP_003903030.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Papio anubis]
Length = 677
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|297299790|ref|XP_002808532.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 1-like [Macaca mulatta]
Length = 677
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHXKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K H +++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHXKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|194214972|ref|XP_001915056.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Equus caballus]
Length = 677
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|26334977|dbj|BAC31189.1| unnamed protein product [Mus musculus]
Length = 500
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 239 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 298
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 299 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 354
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 355 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 403
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 404 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 453
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 211 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 263
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 264 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 319
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 320 PFTATAEEV-VAFFGQHCPITGGKE 343
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 235 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 289
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 290 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 323
>gi|301782433|ref|XP_002926629.1| PREDICTED: epithelial splicing regulatory protein 1-like
[Ailuropoda melanoleuca]
Length = 677
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|338728566|ref|XP_003365697.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Equus caballus]
Length = 659
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|410987479|ref|XP_004000028.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Felis catus]
Length = 677
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|300795130|ref|NP_001179931.1| epithelial splicing regulatory protein 1 [Bos taurus]
gi|296480439|tpg|DAA22554.1| TPA: epithelial splicing regulatory protein 1 [Bos taurus]
Length = 677
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNIRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNIRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GSRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|410987481|ref|XP_004000029.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Felis catus]
Length = 659
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|426236209|ref|XP_004012064.1| PREDICTED: epithelial splicing regulatory protein 1 [Ovis aries]
Length = 761
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 337 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 396
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 397 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 452
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 453 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 501
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 502 ----SAPLIPLPTPPIIPV--LPQQFVPPTNIRDCIRLRGLPYAA--TIEDILDFLGE 551
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 542 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 597
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 598 KDRYVEVFQCSAEEMNFVLMG 618
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 439 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 498
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 499 RFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCIRLRGLPYAATIEDILDFL---GEFSTD 555
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 556 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 613
Query: 528 QVL 530
VL
Sbjct: 614 FVL 616
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 309 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 361
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 362 HRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 417
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 418 PFTATADEV-VAFFGQHCPITGGKE 441
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 333 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GSRYIEVYKATGE 387
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 388 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 421
>gi|402878743|ref|XP_003903032.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Papio anubis]
Length = 604
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|297683325|ref|XP_002819333.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Pongo abelii]
Length = 604
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|170763533|ref|NP_001116299.1| epithelial splicing regulatory protein 1 isoform 5 [Homo sapiens]
gi|114620967|ref|XP_001143905.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2 [Pan
troglodytes]
Length = 604
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|426360261|ref|XP_004047366.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 604
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGARLGSDEKELILLFWKVVDLANKKV 45
>gi|338728568|ref|XP_003365698.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Equus caballus]
Length = 604
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|449277356|gb|EMC85572.1| Epithelial splicing regulatory protein 2 [Columba livia]
Length = 721
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 151/225 (67%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 269 GGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 328
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G E C V G+EG+LFVK PDG+
Sbjct: 329 SNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFL--GPE--CPVTGGKEGLLFVKYPDGR 384
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P +L +
Sbjct: 385 PTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTP 444
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ ++ +G+ +DC+RLRGLPY A
Sbjct: 445 IIPVIPPPYTIA----------------TGSIRDCVRLRGLPYTA 473
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 13/101 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ ILEF+G+ +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 475 IDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMM---- 530
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISP 153
K RY+EVFQCSGE+MN VL +G+ PP P +SP
Sbjct: 531 KDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSP 571
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V
Sbjct: 236 TVDSETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVR 288
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNG 548
F E+ D AL +HK +G RYIE++++T E ++ T L K N + G
Sbjct: 289 FVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRG 348
Query: 549 L---SAQQPMLSHLA-QVPV 564
L + Q+ +L L + PV
Sbjct: 349 LPFTATQEDVLGFLGPECPV 368
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 383 GRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 442
Query: 422 --AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
T + +R+RGLPY +++F T + GV V
Sbjct: 443 TPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDI-----KPHGVHMV 497
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + ++A K HK+ + RY+E+F+ + E+ VL
Sbjct: 498 LNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 549
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 265 NIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALE-RHKHHM----GSRYIEVYKATGE 319
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+ + G + +S + ++ LP ++
Sbjct: 320 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTA 353
>gi|403295786|ref|XP_003938807.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 603
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 480
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 481 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|410987483|ref|XP_004000030.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Felis catus]
Length = 604
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|345793292|ref|XP_544182.3| PREDICTED: epithelial splicing regulatory protein 1 [Canis lupus
familiaris]
Length = 764
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 336 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 395
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 396 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 451
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 452 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 500
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 501 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 550
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 541 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 596
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 597 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 656
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 657 -QPSVLLNP 664
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 450 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 509
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 510 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVL 564
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 565 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 615
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 308 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 360
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 361 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 416
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 417 PFTATADEV-VAFFGQHCPITGGKE 440
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 332 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 386
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 387 DFLKIAGGT 395
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 121/324 (37%), Gaps = 65/324 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ +RYIE+F+ + ++
Sbjct: 440 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL---GKRYIELFRSTAAEVQQ 494
Query: 139 VLNGV---------------------LPPTS----------PAISPVGKTLLSPGMLPHS 167
VLN +PPT+ P + + L G
Sbjct: 495 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFSTD 554
Query: 168 --SQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAAL 225
+ ++ N Q P + + AQ + K+ +D + + Q +A++M
Sbjct: 555 IRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEM--- 611
Query: 226 NKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQFQ 282
N L G T N L PPP + P+ PA AV PT Y P
Sbjct: 612 ----NFVLMGGTLNR------NGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVL 661
Query: 283 L-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGN 336
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 662 LNPRALQPSTAYYPAGTQLFMNYTAYYPSSPGSPTSLGYFPTAASLSGVP-----PQPGT 716
Query: 337 PVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 717 VVRMQGLAYNTGVKEILNFFQGYQ 740
>gi|312070751|ref|XP_003138291.1| hypothetical protein LOAG_02706 [Loa loa]
Length = 224
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 151/227 (66%), Gaps = 35/227 (15%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ALCLS GRRNGEA+VRF D E R++AL+RH+H + RYIEV +A DF+ +A G+
Sbjct: 1 GGIALCLSPEGRRNGEALVRFEDSEQRELALRRHRHFLHNRYIEVYRATRNDFLQIAAGS 60
Query: 426 NNEAQAFLTRGAQ--VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
N+EA F++RG+ +I+RMRGLPY+CT Q+++FF G EN C V DG G+LFV K D
Sbjct: 61 NSEAVRFVSRGSTGAMIVRMRGLPYDCTEAQILEFFAEG-ENGCKVTDG--GILFVNKSD 117
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TGDAFV+F+ EE KAL+KHK +IG RYIELFRST AEVQQV+N+ +E
Sbjct: 118 GRPTGDAFVMFDSEEAGQKALTKHKRTIGTRYIELFRSTQAEVQQVVNRNLE-------- 169
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
Q M+ H +RKDCIRLRGLPYEA
Sbjct: 170 -------NDQRMIVH---------------GSSRKDCIRLRGLPYEA 194
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ + GR G+A V F +E AL +HK I RYIE+ ++ + V N
Sbjct: 108 GGILFVNKSDGRPTGDAFVMFDSEEAGQKALTKHKRTIGTRYIELFRSTQAEVQQVVNRN 167
Query: 426 NNEAQAFLTRGA--QVIIRMRGLPYECTAKQVIDFF 459
Q + G+ + IR+RGLPYE + +++F
Sbjct: 168 LENDQRMIVHGSSRKDCIRLRGLPYEAHVENIVEFL 203
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 65 ILEFL--GEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
ILEF GE + G+ V S G+P+G+AF+ DSE + A +H R +
Sbjct: 92 ILEFFAEGENGCKVTDGGILFVNKSDGRPTGDAFVMFDSEEAGQ-KALTKHKRTI----G 146
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ V+N
Sbjct: 147 TRYIELFRSTQAEVQQVVN 165
>gi|345326895|ref|XP_001507064.2| PREDICTED: epithelial splicing regulatory protein 1, partial
[Ornithorhynchus anatinus]
Length = 605
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 155/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 181 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 240
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V FF C + G+EG+LFV PDG+
Sbjct: 241 SNEVAQFLSKENQVIVRMRGLPFTATADEVSAFF----GQHCPITGGKEGILFVTYPDGR 296
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 297 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 345
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 346 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILEFLGE 395
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 386 IEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 441
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 442 KDRYVEVFQCSAEEMNFVLMG 462
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 283 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 342
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + +++F E S +
Sbjct: 343 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILEFL---GEFSTD 399
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 400 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 457
Query: 528 QVL 530
VL
Sbjct: 458 FVL 460
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 153 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 205
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 206 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 261
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V + QH +G ++
Sbjct: 262 PFTATADEVSA-FFGQHCPITGGKE 285
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 177 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 231
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 232 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 265
>gi|52346028|ref|NP_001005057.1| epithelial splicing regulatory protein 1 [Xenopus (Silurana)
tropicalis]
gi|82182765|sp|Q6DEZ7.1|ESRP1_XENTR RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|49899931|gb|AAH76946.1| MGC89324 protein [Xenopus (Silurana) tropicalis]
Length = 687
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 254 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C V G+EG+LFV PD +
Sbjct: 314 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF----GQQCPVTGGKEGILFVTYPDNR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 370 PTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYS----------- 418
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ I +DCIRLRGLPY A + DI F+G+
Sbjct: 419 ----SAPLIPLPTPPIIPV--LPQPFIPPVNVRDCIRLRGLPYAA--TIEDILEFLGE 468
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 79/130 (60%), Gaps = 15/130 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG++FIQM S AYLAAQ H + M
Sbjct: 459 IEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTL-LSPGMLPHSSQPL 171
K RY+EVFQCS E+MN VL NG+ PP P +SP T ++P + L
Sbjct: 515 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAQAAVIPTEAAAL 574
Query: 172 YPQHNTQINP 181
Y Q + +NP
Sbjct: 575 Y-QPSLLLNP 583
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------- 429
R G+A V F +E+ ALK+HK + KRYIE+ ++ + V ++
Sbjct: 369 RPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYSSAPLIPLPTP 428
Query: 430 -------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
Q F+ + IR+RGLPY T + +++F E S ++ GV V
Sbjct: 429 PIIPVLPQPFIPPVNVRDCIRLRGLPYAATIEDILEFL---GEFSADIRT--HGVHMVLN 483
Query: 482 PDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GD+F+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 484 HQGRPSGDSFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 533
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
IIR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 TIIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 278
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL---- 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 279 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Query: 550 SAQQPMLSHLAQVPV 564
+A++ + Q PV
Sbjct: 339 TAEEVLAFFGQQCPV 353
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 305 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G+ LGSDE+E+I L++ +I+ KV
Sbjct: 6 PDYLVVLFTTTAGANGSKLGSDEKEVIQLLWKVINLANKKV 46
>gi|224064269|ref|XP_002191895.1| PREDICTED: epithelial splicing regulatory protein 2 [Taeniopygia
guttata]
Length = 702
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 152/225 (67%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL++ GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 254 GGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G+E C V G+EG+LFVK PDG+
Sbjct: 314 SNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFL--GSE--CPVTGGKEGLLFVKYPDGR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P +L +
Sbjct: 370 PTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTP 429
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ ++ +G+ +DC+RLRGLPY A
Sbjct: 430 IIPVIPPPYTIA----------------TGSIRDCVRLRGLPYTA 458
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ ILEF+G+ +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 460 IDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMM---- 515
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCSGE+MN VL G
Sbjct: 516 KDRYVEVFQCSGEEMNFVLMG 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V
Sbjct: 221 TVDSETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNSQGRRNGEALVR 273
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNG 548
F E+ D AL +HK +G RYIE++++T E ++ T L K N + G
Sbjct: 274 FVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRG 333
Query: 549 L---SAQQPMLSHL-AQVPV 564
L + Q+ +L L ++ PV
Sbjct: 334 LPFTATQEDVLGFLGSECPV 353
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 368 GRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 427
Query: 422 --AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
T + +R+RGLPY +++F T + GV V
Sbjct: 428 TPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDI-----KPHGVHMV 482
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + ++A K HK+ + RY+E+F+ + E+ VL
Sbjct: 483 LNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 534
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + NSQG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALE-RHKHHM----GSRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+ + G + +S + ++ LP ++
Sbjct: 305 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTA 338
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
V F ATAG G LGSDE+EIILL++ ++D KV
Sbjct: 11 VLFGATAGAYGAKLGSDEREIILLVWQVVDLQNKKV 46
>gi|148223399|ref|NP_001079524.1| epithelial splicing regulatory protein 1 [Xenopus laevis]
gi|82241595|sp|Q7ZY29.1|ESRP1_XENLA RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|27694832|gb|AAH44002.1| MGC53361 protein [Xenopus laevis]
Length = 688
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 254 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C V G+EG+LFV PD +
Sbjct: 314 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF----GQQCPVTGGKEGILFVTYPDNR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 370 PTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYS----------- 418
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ I +DCIRLRGLPY A + DI F+G+
Sbjct: 419 ----SAPLIPLPTPPIIPV--LPQPFIPPVNVRDCIRLRGLPYAA--TIEDILEFLGE 468
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 79/130 (60%), Gaps = 15/130 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG++FIQM S AYLAAQ H + M
Sbjct: 459 IEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTL-LSPGMLPHSSQPL 171
K RY+EVFQCS E+MN VL NG+ PP P +SP T ++P + L
Sbjct: 515 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAQAAVIPTEAAAL 574
Query: 172 YPQHNTQINP 181
Y Q + +NP
Sbjct: 575 Y-QPSLLLNP 583
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------- 429
R G+A V F +E+ ALK+HK + KRYIE+ ++ + V ++
Sbjct: 369 RPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYSSAPLIPLPTP 428
Query: 430 -------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
Q F+ + IR+RGLPY T + +++F E S ++ GV V
Sbjct: 429 PIIPVLPQPFIPPVNVRDCIRLRGLPYAATIEDILEFL---GEFSADIRT--HGVHMVLN 483
Query: 482 PDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GD+F+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 484 HQGRPSGDSFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 533
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
IIR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 TIIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 278
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL---- 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 279 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Query: 550 SAQQPMLSHLAQVPV 564
+A++ + Q PV
Sbjct: 339 TAEEVLAFFGQQCPV 353
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 305 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G+ LGSDE+E+I L++ +I+ KV
Sbjct: 6 PDYLVVLFTTTAGANGSKLGSDEKEVIQLLWKVINLANKKV 46
>gi|326927219|ref|XP_003209790.1| PREDICTED: epithelial splicing regulatory protein 2-like [Meleagris
gallopavo]
Length = 701
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 151/225 (67%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 254 GGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G E C V G+EG+LFVK PDG+
Sbjct: 314 SNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFL--GPE--CPVTGGKEGLLFVKYPDGR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P +L +
Sbjct: 370 PTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTP 429
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ ++ +G+ +DC+RLRGLPY A
Sbjct: 430 IIPVIPPPYTIA----------------TGSIRDCVRLRGLPYTA 458
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL+F+G+ ++I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 460 IDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMM---- 515
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCSGE+MN VL G
Sbjct: 516 KDRYVEVFQCSGEEMNFVLMG 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 368 GRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 427
Query: 422 --AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
T + +R+RGLPY ++DF T + GV V
Sbjct: 428 TPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILDFMGDATADI-----KPHGVHMV 482
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + ++A K HK+ + RY+E+F+ + E+ VL
Sbjct: 483 LNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 534
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 225 ETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFVNS 277
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL--- 549
E+ D AL +HK +G RYIE++++T E ++ T L K N + GL
Sbjct: 278 EQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFT 337
Query: 550 SAQQPMLSHLA-QVPV 564
+ Q+ +L L + PV
Sbjct: 338 ATQEDVLGFLGPECPV 353
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALE-RHKHHM----GSRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+ + G + +S + ++ LP ++
Sbjct: 305 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTA 338
>gi|71895579|ref|NP_001025737.1| epithelial splicing regulatory protein 2 [Gallus gallus]
gi|75571416|sp|Q5ZLR4.1|ESRP2_CHICK RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|53128733|emb|CAG31329.1| hypothetical protein RCJMB04_5c3 [Gallus gallus]
Length = 701
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 151/225 (67%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 254 GGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G E C V G+EG+LFVK PDG+
Sbjct: 314 SNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFL--GPE--CPVTGGKEGLLFVKYPDGR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P +L +
Sbjct: 370 PTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTP 429
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ ++ +G+ +DC+RLRGLPY A
Sbjct: 430 IIPVIPPPYTIA----------------TGSIRDCVRLRGLPYTA 458
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL+F+G+ ++I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 460 IDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMM---- 515
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCSGE+MN VL G
Sbjct: 516 KDRYVEVFQCSGEEMNFVLMG 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 368 GRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 427
Query: 422 --AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
T + +R+RGLPY ++DF T + GV V
Sbjct: 428 TPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILDFMGDATADI-----KPHGVHMV 482
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + ++A K HK+ + RY+E+F+ + E+ VL
Sbjct: 483 LNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 534
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V
Sbjct: 221 TVDSETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVR 273
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNG 548
F E+ D AL +HK +G RYIE++++T E ++ T L K N + G
Sbjct: 274 FVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRG 333
Query: 549 L---SAQQPMLSHLA-QVPV 564
L + Q+ +L L + PV
Sbjct: 334 LPFTATQEDVLGFLGPECPV 353
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALE-RHKHHM----GSRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+ + G + +S + ++ LP ++
Sbjct: 305 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTA 338
>gi|85700309|gb|AAI12044.1| ESRP1 protein [Homo sapiens]
Length = 392
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 100 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 159
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 160 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 215
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 216 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 264
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 265 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 314
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 11/92 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 305 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 360
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPP 146
K RY+EVFQCS E+MN VL NG+ PP
Sbjct: 361 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPP 392
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 214 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 273
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFV 479
Q F+ + IR+RGLPY T + ++DF E T+ + GV V
Sbjct: 274 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTH------GVHMV 327
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 328 LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 379
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 72 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 124
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 125 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 181
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 182 --FTATAEEVVAFFGQHCPITGGKE 204
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 96 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 150
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 151 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 184
>gi|7020094|dbj|BAA90992.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 93 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 152
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 153 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 208
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 209 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 257
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 258 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 307
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNR 115
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +
Sbjct: 298 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKK 351
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 65 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 117
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 118 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 174
Query: 554 PMLSHLAQVPVPYLPQHI-ITSG 575
+ A+ V + QH IT G
Sbjct: 175 --FTATAEEVVAFFGQHCPITGG 195
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 207 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 266
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E + ++ GV V
Sbjct: 267 PPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFATDIR--THGVHMVL 321
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKE 509
G+ +GDAF+ + + A A K HK+
Sbjct: 322 NHQGRPSGDAFIQMKSADRAFMAAQKCHKK 351
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 89 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 143
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 144 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 177
>gi|444525895|gb|ELV14190.1| Epithelial splicing regulatory protein 1, partial [Tupaia
chinensis]
Length = 689
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 156/238 (65%), Gaps = 19/238 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 264 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 323
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 324 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 379
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQ+V +
Sbjct: 380 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQKVFK----------IQVL 429
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
N SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 430 NRFSSAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 483
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 474 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 529
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 530 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 589
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 590 -QPSVLLNP 597
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G G+ GR G+A V F +E+ AL++HK + KRYIE+ T A +
Sbjct: 366 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQKVFK 425
Query: 421 VAGGNNNEA----------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFF-EAG 462
+ N + Q F+ + IR+RGLPY T + ++DF E
Sbjct: 426 IQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFA 485
Query: 463 TENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRS 521
T+ + GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+
Sbjct: 486 TDIRTH------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQC 539
Query: 522 TTAEVQQVL 530
+ E+ VL
Sbjct: 540 SAEEMNFVL 548
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 236 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 288
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 289 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 345
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 346 --FTATAEEVVAFFGQHCPITGGKE 368
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 260 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 314
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 315 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 348
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 16 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 56
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 126/347 (36%), Gaps = 71/347 (20%)
Query: 62 VEHILEFLGEFAS-NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
E ++ F G+ +G+ V G+P+G+AF+ E Y LR +++++ G
Sbjct: 350 AEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-G 406
Query: 121 KKQRYIEVFQCSGEDMNLVLN-GVLPPTSPAISPVGKTLLSPGMLPHSSQP--------- 170
K RYIE+F+ + ++ V VL S A T +LP P
Sbjct: 407 K--RYIELFRSTAAEVQKVFKIQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIR 464
Query: 171 ---------------LYPQHNTQINPGLSHL----------DPLVNVHLTQAL---AQAQ 202
+ T I H+ D + + AQ
Sbjct: 465 LRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKC 524
Query: 203 YAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIP 262
+ K+ +D + + Q +A++M N L G T + N L PPP + P
Sbjct: 525 HKKTMKDRYVEVFQCSAEEM-------NFVLMGGTL------NRNGLSPPPCKLPCLSPP 571
Query: 263 T-NLPALPAV-PTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVL 314
+ PA AV PT Y P L P + + P T F N P P +P L
Sbjct: 572 SYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSL 631
Query: 315 PKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
FP L+ P P PG V + L N + +LN GY+
Sbjct: 632 GYFPTAANLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 673
>gi|358420736|ref|XP_001789374.2| PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]
gi|296490145|tpg|DAA32258.1| TPA: fusilli-like [Bos taurus]
Length = 767
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 149/225 (66%), Gaps = 21/225 (9%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A G+RNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGQRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
SA L +PV LPQ + +DCIRLRGLPY A
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNIRDCIRLRGLPYVA 456
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 TEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVLLNP 581
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCIRLRGLPYVATTEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSLDQDIARFFKG-----LNIAKG--GAALCLNAQGQRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QGQ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGQRNGEALVRFVSEEHRDLALQ-RHKHHM----GSRYIEVYKATGE 303
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 304 DFLKIAGGT 312
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 122/327 (37%), Gaps = 71/327 (21%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNGV---------------------LPPTS----------PAISPVGKTL-----LSPG 162
VLN +PPT+ P ++ L S
Sbjct: 412 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCIRLRGLPYVATTEDILDFLGEFSTD 471
Query: 163 MLPHSSQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQM 222
+ H + N Q P + + AQ + K+ +D + + Q +A++M
Sbjct: 472 IRTHGVHMVL---NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEM 528
Query: 223 AALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFP 279
N L G T N L PPP + P+ PA AV PT Y P
Sbjct: 529 -------NFVLMGGTLNR------NGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQP 575
Query: 280 QFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPT 333
L P + + P T F N P P +P L FP L+ P P
Sbjct: 576 SVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVP-----PQ 630
Query: 334 PGNPVALCPLVQNIWLSLLLNTIPGYE 360
PG V + L N + +LN GY+
Sbjct: 631 PGTVVRMQGLAYNTGVKEILNFFQGYQ 657
>gi|395510177|ref|XP_003759357.1| PREDICTED: epithelial splicing regulatory protein 2, partial
[Sarcophilus harrisii]
Length = 470
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 150/226 (66%), Gaps = 22/226 (9%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF+D E RD+AL+RHKHH+ RYIEV KA+GE+F+ +AGG
Sbjct: 2 GGVALCLNAQGRRNGEALVRFVDSEQRDLALERHKHHMGARYIEVYKASGEEFLKIAGGT 61
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++E FL+R QVIIRMRGLP+ T V+ F G E C V G EG+LFV+ PDG+
Sbjct: 62 SHEVAQFLSREDQVIIRMRGLPFTATPADVLAFL--GPE--CPVTGGHEGLLFVRYPDGR 117
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL KHK +G RYIELFRST AEVQQVLN+ TSS
Sbjct: 118 PTGDAFALFACEELAQSALRKHKGILGKRYIELFRSTAAEVQQVLNR---------YTSS 168
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTR-KDCIRLRGLPYEA 590
P++ L +P LP +G +DC+RLRGLPY A
Sbjct: 169 --------PLIPTLPAPLIPVLPAPFPLAGAGVRDCVRLRGLPYTA 206
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL FLGE A +I GVHMV N QG+PSG+AFIQM S A +AAQ H + M
Sbjct: 208 IDDILGFLGEVAGDIRPHGVHMVLNQQGRPSGDAFIQMKSADRALVAAQRCHKKMM---- 263
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K+RY+EVF CSGE+M+LVL G
Sbjct: 264 KERYVEVFPCSGEEMSLVLMG 284
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A F +E AL++HK + KRYIE+ ++ + V +
Sbjct: 116 GRPTGDAFALFACEELAQSALRKHKGILGKRYIELFRSTAAEVQQVLNRYTSSPLIPTLP 175
Query: 430 --------QAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
F GA V +R+RGLPY + ++ F E + ++ GV V
Sbjct: 176 APLIPVLPAPFPLAGAGVRDCVRLRGLPYTASIDDILGFL---GEVAGDIR--PHGVHMV 230
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A + HK+ + RY+E+F + E+ VL
Sbjct: 231 LNQQGRPSGDAFIQMKSADRALVAAQRCHKKMMKERYVEVFPCSGEEMSLVL 282
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++RM+GLPY K ++ FF+ + + VL + G+ GDA V F +
Sbjct: 395 ALVRMQGLPYTAGVKDILSFFQGYQLPA-------DSVLVLHSFSGRPRGDALVTFPSLD 447
Query: 499 EADKALS-KHKESIGIRYIEL 518
A +A++ +H ++G ++++L
Sbjct: 448 AARRAVAEEHGRTLGGQHVQL 468
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GV + N+QG+ +GEA ++ LA + RH +M RYIEV++ SGE+ +
Sbjct: 3 GVALCLNAQGRRNGEALVRFVDSEQRDLALE-RHKHHM----GARYIEVYKASGEEFLKI 57
Query: 140 LNGV 143
G
Sbjct: 58 AGGT 61
>gi|449494990|ref|XP_002198687.2| PREDICTED: epithelial splicing regulatory protein 1 [Taeniopygia
guttata]
Length = 766
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 153/238 (64%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ T ++V+ FF C V G+EGVLFV PD +
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFNVTTEEVLTFF----GQHCPVTGGKEGVLFVTYPDSR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLNRYSSTPLIPLPRPP 428
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ QQ ++P I +DCIRLRGLPY A + DI F+G+
Sbjct: 429 ILPVLPQQ------------FVPPTTI-----RDCIRLRGLPYAA--TIEDILEFLGE 467
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 79/127 (62%), Gaps = 14/127 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG+AFIQM S A+LAAQ H + M
Sbjct: 458 IEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQ 174
K RY+EVFQCS E+MN VL NG+ PP P ISP + +P + + LY Q
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPP--PCISPPAYSFPAPAAVVPTEAALY-Q 570
Query: 175 HNTQINP 181
+ +NP
Sbjct: 571 PSMLLNP 577
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV R G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 355 GKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNN--------------EAQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + +++F E S +
Sbjct: 415 RYSSTPLIPLPRPPILPVLPQQFVPPTTIRDCIRLRGLPYAATIEDILEFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 AVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL 333
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 303
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 304 DFLKIAGGT 312
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLITSQYKE 52
P Y + FV TAG G LGSDE+E++ L++ ++D +++ VL+ + E
Sbjct: 5 PDYLVILFVTTAGTNGARLGSDERELLQLLWKVVDLRSKELGHLHDVLVRPDHTE 59
>gi|348572536|ref|XP_003472048.1| PREDICTED: epithelial splicing regulatory protein 2 [Cavia
porcellus]
Length = 719
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 157/238 (65%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D+E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 277 GGVALCLNAQGRRNGEALIRFTDREQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 336
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 337 SLEVARFLSREDQVILRLRGLPFSAGPTDVLSFL--GPE--CPVTGGADGLLFVRHPDGR 392
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P SLT+
Sbjct: 393 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPSLTA- 451
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P+L P+P+ + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 452 --------PLL------PIPF----PLAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 489
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+ SG+AFIQM S A AAQ H + M
Sbjct: 480 IEDILSFLGEAAADIQPHGVHMVLNQQGRLSGDAFIQMTSAERALAAAQRCHKKMM---- 535
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSP--GMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP P ++P +
Sbjct: 536 KERYVEVVPCSTEEMSRVLMGGTLSRSGMSPPPCKLPCLSPPTYGTFQPTSALIPTETAA 595
Query: 171 LYP 173
LYP
Sbjct: 596 LYP 598
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
GR G+A F +E AL+RHK + KRYIE+ ++ + V N + L
Sbjct: 391 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL--NRYASSPLLPS 448
Query: 434 -------------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
+ +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 LTAPLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIQ--PHGVHMVL 503
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 NQQGRLSGDAFIQMTSAERALAAAQRCHKKMMKERYVEVVPCSTEEMSRVL 554
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF N+ G GV G+ G+A + F
Sbjct: 247 SETVVRARGLPWQSSDQDVARFF-----RGLNIARG--GVALCLNAQGRRNGEALIRFTD 299
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 300 REQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 336
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 273 NIARGGVALCLNAQGRRNGEALIRFTDREQRDLALQ-RHKHHM----GVRYIEVYKATGE 327
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 328 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 363
>gi|297699054|ref|XP_002826612.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Pongo abelii]
Length = 727
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 155/238 (65%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 401 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPVLPTLTA- 459
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P+L +P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 460 --------PLLP----IPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 497
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-T 434
GR G+A F +E AL+RHK + KRYIE+ ++ + V N + L T
Sbjct: 399 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL--NRYASGPVLPT 456
Query: 435 RGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
A ++ +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 457 LTAPLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVL 511
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 512 NQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 335
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 336 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 374 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 428
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
RYIE+F+ + ++ VLN A PV TL +P +LP
Sbjct: 429 RYIELFRSTAAEVQQVLNRY------ASGPVLPTLTAP-LLP 463
>gi|359063387|ref|XP_002685850.2| PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]
Length = 1157
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 155/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A G+RNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGQRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNIRDCIRLRGLPYVA--TTEDILDFLGE 467
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 TEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVLLNP 581
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 21/171 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V ++
Sbjct: 367 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPT 426
Query: 430 --------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 427 PPIIPVLPQQFVPPTNIRDCIRLRGLPYVATTEDILDFL---GEFSTDIRT--HGVHMVL 481
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 482 NHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 532
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSLDQDIARFFKG-----LNIAKG--GAALCLNAQGQRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 334 PFTATADEV-VAFFGQHCPITGGKE 357
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QGQ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGQRNGEALVRFVSEEHRDLALQ-RHKHHM----GSRYIEVYKATGE 303
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 304 DFLKIAGGT 312
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 127/345 (36%), Gaps = 72/345 (20%)
Query: 62 VEHILEFLGEFAS-NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
+ ++ F G+ +G+ V G+P+G+AF+ E Y LR +++++
Sbjct: 339 ADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-- 394
Query: 121 KKQRYIEVFQCSGEDMNLVLNGV---------------------LPPTS----------P 149
+RYIE+F+ + ++ VLN +PPT+ P
Sbjct: 395 -GKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCIRLRGLP 453
Query: 150 AISPVGKTL-----LSPGMLPHSSQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYA 204
++ L S + H + N Q P + + AQ +
Sbjct: 454 YVATTEDILDFLGEFSTDIRTHGVHMVL---NHQGRPSGDAFIQMKSADRAFMAAQKCHK 510
Query: 205 KSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT- 263
K+ +D + + Q +A++M N L G T N L PPP + P+
Sbjct: 511 KTMKDRYVEVFQCSAEEM-------NFVLMGGTLNR------NGLSPPPCKLPCLSPPSY 557
Query: 264 NLPALPAV-PTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPK 316
PA AV PT Y P L P + + P T F N P P +P L
Sbjct: 558 TFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGY 617
Query: 317 FPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
FP L+ P P PG V + L N + +LN GY+
Sbjct: 618 FPTAANLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 657
>gi|297699056|ref|XP_002826613.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Pongo abelii]
Length = 717
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 155/238 (65%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPVLPTLTA- 449
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P+L +P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 450 --------PLLP----IPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-T 434
GR G+A F +E AL+RHK + KRYIE+ ++ + V N + L T
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL--NRYASGPVLPT 446
Query: 435 RGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
A ++ +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 447 LTAPLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVL 501
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 502 NQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 111/280 (39%), Gaps = 50/280 (17%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV--------GKTLLSPGMLPHSSQ- 169
RYIE+F+ + ++ VLN VLP + + P+ G+ + LP+++
Sbjct: 419 RYIELFRSTAAEVQQVLNRYASGPVLPTLTAPLLPIPFPLAPGTGRDCVRLRGLPYTATI 478
Query: 170 ----PLYPQHNTQINPGLSHL------DPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAA 219
+ I P H+ P + + A+ A +Q+ + +M +
Sbjct: 479 EDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYV 538
Query: 220 QQMAALNKPHNMALNGHT---PTLIPAPSPNALMPPP----LNSKSTTIPTNLPAL---- 268
+ + + + L G T + P P + PP + T IPT AL
Sbjct: 539 EVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAALYPSS 598
Query: 269 --------PAVPTSGGYFPQFQLPINMN-TAHLLQPMNTP 299
PA PT Y+P + +N TA+ P +P
Sbjct: 599 ALLPAARVPAAPTPVAYYPGPATQLYLNYTAYYPSPPVSP 638
>gi|351713464|gb|EHB16383.1| Epithelial splicing regulatory protein 1 [Heterocephalus glaber]
Length = 677
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/240 (52%), Positives = 157/240 (65%), Gaps = 26/240 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 247 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 306
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 307 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 362
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLT 543
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQ QVLN+
Sbjct: 363 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQVVQVLNRFS--------- 413
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 414 ------SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 463
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++A+Q H + M
Sbjct: 454 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMASQKCHKKTM---- 509
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 510 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 569
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 570 -QPSVLLNP 577
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + V N +
Sbjct: 361 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQVVQVLNRFSSAPLIPL 420
Query: 430 ----------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
Q F+ + IR+RGLPY T + ++DF E S ++ GV
Sbjct: 421 PTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHM 475
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 476 VLNHQGRPSGDAFIQMKSADRAFMASQKCHKKTMKDRYVEVFQCSAEEMNFVL 528
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 219 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 271
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 272 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 328
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 329 --FTATAEEVVAFFGQHCPITGGKE 351
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 243 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 297
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 298 DFLKIAGGT 306
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVL 45
P Y V F TAG G LGSDE+E+ILL++ ++D KV+
Sbjct: 5 PDYLVVLFGITAGATGARLGSDEKELILLLWKVVDLANKKVI 46
>gi|327276493|ref|XP_003223004.1| PREDICTED: epithelial splicing regulatory protein 2-like [Anolis
carolinensis]
Length = 714
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 150/225 (66%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 257 GGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 316
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G E C V +EG+LFVK PDG+
Sbjct: 317 SNEVAQFLSKENQVIIRMRGLPFTATPEDVLGFL--GPE--CPVTGEKEGLLFVKYPDGR 372
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P +L +
Sbjct: 373 PTGDAFVLFACEEFAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTP 432
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ ++ +G+ +DC+RLRGLPY A
Sbjct: 433 IIPVIPPPYTIA----------------AGSARDCVRLRGLPYTA 461
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 70/136 (51%), Gaps = 30/136 (22%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ ILEF+G+ +I GVHMV N QG+ SG+AFIQM S AYL AQ H + M
Sbjct: 463 IDDILEFMGDATGDIKPHGVHMVLNQQGRLSGDAFIQMKSSDRAYLVAQKCHKKMM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-------------------VLPPTSPAISPVGKTLLSPG 162
K RY+EVFQCSGE+MN VL G T+ A+ P TL
Sbjct: 519 KDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCLSPPGYAAFQTAAAVIPADATL---- 574
Query: 163 MLPHSSQPLYPQHNTQ 178
+ SQ L PQ TQ
Sbjct: 575 ---YQSQALLPQTRTQ 587
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 228 ETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFVNS 280
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL 549
E+ D AL +HK +G RYIE++++T E ++ T L K N + GL
Sbjct: 281 EQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGL 337
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F +E ALK+HK + KRYIE+ ++ + V
Sbjct: 371 GRPTGDAFVLFACEEFAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 430
Query: 422 --AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
A+ +R+RGLPY +++F T + GV V
Sbjct: 431 TPIIPVIPPPYTIAAGSARDCVRLRGLPYTAGIDDILEFMGDATGDI-----KPHGVHMV 485
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A K HK+ + RY+E+F+ + E+ VL
Sbjct: 486 LNQQGRLSGDAFIQMKSSDRAYLVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 537
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 253 NIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALE-RHKHHM----GSRYIEVYKATGE 307
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + ++ LP ++ P
Sbjct: 308 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATP 343
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
V F ATAG G LGSDE+E+ILL++ ++D + KV
Sbjct: 12 VLFGATAGALGAKLGSDERELILLVWQVVDLHSKKV 47
>gi|194208736|ref|XP_001498922.2| PREDICTED: epithelial splicing regulatory protein 2-like [Equus
caballus]
Length = 659
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 157/238 (65%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 217 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 276
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 277 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 332
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P ++T+
Sbjct: 333 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTVTA- 391
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P+L P+P+ + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 392 --------PLL------PIPF----PLAAGTERDCVRLRGLPYTA--TIEDILSFLGE 429
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 420 IEDILSFLGEAAADIQPHGVHMVLNQQGRPSGDAFIQMTSAERALGAAQRCHKKVM---- 475
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS ++M+ VL +G+ PP P +SP +P ++P +
Sbjct: 476 KERYVEVVPCSTDEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAFATFQATPTLIPTETAA 535
Query: 171 LY 172
LY
Sbjct: 536 LY 537
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-T 434
GR G+A F +E AL+RHK + KRYIE+ ++ + V N + L T
Sbjct: 331 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL--NRYASSPLLPT 388
Query: 435 RGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
A ++ +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 389 VTAPLLPIPFPLAAGTERDCVRLRGLPYTATIEDILSFL---GEAAADIQ--PHGVHMVL 443
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 444 NQQGRPSGDAFIQMTSAERALGAAQRCHKKVMKERYVEVVPCSTDEMSRVL 494
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 187 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 239
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 240 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 276
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 213 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 267
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 268 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 303
>gi|363730887|ref|XP_418338.3| PREDICTED: epithelial splicing regulatory protein 1 [Gallus gallus]
Length = 636
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 155/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+++EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ T ++V+ FF C V G+EGVLFV PD +
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFNVTTEEVLAFF----GQHCPVTGGKEGVLFVTYPDSR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P T
Sbjct: 369 PTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLNRYSSTPLIPLPTPP 428
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ QQ ++P + +DCIRLRGLPY A + DI F+G+
Sbjct: 429 ILPVLPQQ------------FVPPTNV-----RDCIRLRGLPYAA--TIEDILEFLGE 467
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG+AFIQM S A+LAAQ H + M
Sbjct: 458 IEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQRCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP + +P + + LY
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYSFPAPSAVVPTEAALY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVLLNP 581
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV R G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 355 GKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNN--------------EAQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + +++F E S +
Sbjct: 415 RYSSTPLIPLPTPPILPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILEFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A + HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQRCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 AVIRARGLPWQSSDQDIAKFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVNEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL 333
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ +E LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 303
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 304 DFLKIAGGT 312
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y + FV TAG G LGSDE+E++ L++ ++D K+
Sbjct: 5 PDYLVILFVTTAGTNGARLGSDERELLQLLWKVVDLRTKKL 45
>gi|326917907|ref|XP_003205236.1| PREDICTED: epithelial splicing regulatory protein 1-like [Meleagris
gallopavo]
Length = 671
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 159/238 (66%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+++EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ T ++V+ FF C V G+EGVLFV PD +
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFNVTTEEVLAFF----GQHCPVTGGKEGVLFVTYPDSR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ +S+
Sbjct: 368 PTGDAFVLFACEEYAQNALKKHKDLLGRRYIELFRSTAAEVQQVLNR---------YSST 418
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P+L L Q VP P ++ +DCIRLRGLPY A + DI F+G+
Sbjct: 419 PLIPLPTPPILPVLPQQFVP--PTNV------RDCIRLRGLPYAA--TIEDILDFLGE 466
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A+LAAQ H + M
Sbjct: 457 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQKCHKKTM---- 512
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RYIEVFQCS E+MN VL G
Sbjct: 513 KDRYIEVFQCSAEEMNFVLMG 533
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV R G+A V F +E+ ALK+HK + +RYIE+ ++ + V
Sbjct: 354 GKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGRRYIELFRSTAAEVQQVLN 413
Query: 424 GNNN--------------EAQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 414 RYSSTPLIPLPTPPILPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 470
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RYIE+F+ + E+
Sbjct: 471 IR--THGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQKCHKKTMKDRYIEVFQCSAEEMN 528
Query: 528 QVL 530
VL
Sbjct: 529 FVL 531
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 224 AVIRARGLPWQSSDQDIAKFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVNEE 276
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 277 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL 332
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ +E LA Q RH +M RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
D + G + +S + ++ LP
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLP 333
>gi|327269521|ref|XP_003219542.1| PREDICTED: epithelial splicing regulatory protein 1-like [Anolis
carolinensis]
Length = 648
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 158/238 (66%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 246 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 305
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ T ++V+ FF C V G+EG+LFV PD +
Sbjct: 306 SNEVAQFLSKENQVIVRMRGLPFNVTTEEVLTFF----GQHCPVTGGKEGILFVTYPDHR 361
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ +S+
Sbjct: 362 PTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLNR---------YSST 412
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P+L L Q VP P ++ +DCIRLRGLPY A + DI F+G+
Sbjct: 413 PLIPLPTPPILPVLPQQFVP--PTNV------RDCIRLRGLPYAA--TIEDILGFLGE 460
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 451 IEDILGFLGEFSADIRTHGVHMVLNHQGRPSGDAFIQMKSSERAFMAAQKCHKKTM---- 506
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 507 KDRYVEVFQCSAEEMNFVLMG 527
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------- 429
R G+A V F +E+ ALK+HK + KRYIE+ ++ + V ++
Sbjct: 361 RPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLNRYSSTPLIPLPTP 420
Query: 430 -------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
Q F+ + IR+RGLPY T + ++ F E S ++ GV V
Sbjct: 421 PILPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILGFL---GEFSADIR--THGVHMVLN 475
Query: 482 PDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + E A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 476 HQGRPSGDAFIQMKSSERAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 525
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
IIR RGLP++ + + V FF+ N+ G G G+ G+A V F EE
Sbjct: 218 TIIRARGLPWQSSDQDVARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 270
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 271 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL 326
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 242 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 296
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
D + G + +S + ++ LP
Sbjct: 297 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLP 327
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F ATAG QG LLGSDE+E+I L++ ++D KV
Sbjct: 5 PDYLVVLFGATAGAQGPLLGSDERELIQLLWRVLDLANRKV 45
>gi|440906249|gb|ELR56534.1| Epithelial splicing regulatory protein 1, partial [Bos grunniens
mutus]
Length = 715
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 153/238 (64%), Gaps = 27/238 (11%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 290 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 349
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 350 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 405
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AE VLN+
Sbjct: 406 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAE---VLNRFS----------- 451
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 452 ----SAPLIPLPTPPIIPV--LPQQFVPPTNIRDCIRLRGLPYAA--TIEDILDFLGE 501
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 492 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 547
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 548 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 607
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 608 -QPSVLLNP 615
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 18/168 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ AL++HK + KRYIE+ ++ + +N
Sbjct: 404 GRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVLNRFSSAPLIPLPTPPI 463
Query: 430 -----QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
Q F+ + IR+RGLPY T + ++DF E S ++ GV V
Sbjct: 464 IPVLPQQFVPPTNIRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVLNHQ 518
Query: 484 GKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 519 GRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 566
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 262 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 314
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 315 HRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 370
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 371 PFTATADEV-VAFFGQHCPITGGKE 394
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 286 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GSRYIEVYKATGE 340
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 341 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 374
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 42 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 82
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 122/321 (38%), Gaps = 62/321 (19%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDM-- 136
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 394 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVLN 448
Query: 137 ----------------NLVLNGVLPPTS----------PAISPVGKTLLSPGMLPHS--S 168
++ +PPT+ P + + L G +
Sbjct: 449 RFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCIRLRGLPYAATIEDILDFLGEFSTDIRT 508
Query: 169 QPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAALNKP 228
++ N Q P + + AQ + K+ +D + + Q +A++M
Sbjct: 509 HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEM------ 562
Query: 229 HNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQFQL-P 284
N L G T + N L PPP + P+ PA AV PT Y P L P
Sbjct: 563 -NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNP 615
Query: 285 INMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGNPVA 339
+ + P T F N P P +P L FP L+ P P PG V
Sbjct: 616 RALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVP-----PQPGTVVR 670
Query: 340 LCPLVQNIWLSLLLNTIPGYE 360
+ L N + +LN GY+
Sbjct: 671 MQGLAYNTGVKEILNFFQGYQ 691
>gi|332227572|ref|XP_003262966.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Nomascus leucogenys]
Length = 717
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 391 PTGDAFALFACEELAQAALRRHKAMLGKRYIELFRSTAAEVQQVLNR---------YASS 441
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 PLLPTLT----APLLPIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKAMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 448
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
>gi|332227574|ref|XP_003262967.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Nomascus leucogenys]
Length = 727
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 401 PTGDAFALFACEELAQAALRRHKAMLGKRYIELFRSTAAEVQQVLNR---------YASS 451
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 452 PLLPTLT----APLLPIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 497
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 399 GRPTGDAFALFACEELAQAALRRHKAMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 458
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 459 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 513
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 514 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 562
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 335
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 336 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
>gi|114663265|ref|XP_001167050.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1 [Pan
troglodytes]
Length = 727
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 401 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 460
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 461 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 497
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 399 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 458
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 459 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 513
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 514 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 335
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 336 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 374 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 428
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 429 RYIELFRSTAAEVQQVLN 446
>gi|45935393|ref|NP_079215.2| epithelial splicing regulatory protein 2 [Homo sapiens]
gi|20988380|gb|AAH30146.1| Epithelial splicing regulatory protein 2 [Homo sapiens]
gi|119603622|gb|EAW83216.1| RNA binding motif protein 35B, isoform CRA_c [Homo sapiens]
Length = 717
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGTEGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 448
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 419 RYIELFRSTAAEVQQVLN 436
>gi|114663263|ref|XP_511052.2| PREDICTED: epithelial splicing regulatory protein 2 isoform 2 [Pan
troglodytes]
Length = 717
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 448
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 419 RYIELFRSTAAEVQQVLN 436
>gi|426382631|ref|XP_004057907.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 727
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGTEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 401 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 460
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 461 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 497
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 399 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 458
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 459 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 513
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 514 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 335
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 336 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 374 VLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 428
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 429 RYIELFRSTAAEVQQVLN 446
>gi|403290547|ref|XP_003936375.1| PREDICTED: epithelial splicing regulatory protein 2 [Saimiri
boliviensis boliviensis]
Length = 715
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 151/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 273 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 333 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+
Sbjct: 389 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYA----------- 437
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
S +P+P+ + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 438 ----SGPLLPTLTAPLLPIPF----ALAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 485
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 15/126 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 476 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 531
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 532 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAT 591
Query: 171 LYPQHN 176
LYP
Sbjct: 592 LYPSST 597
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQ- 430
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 387 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 446
Query: 431 --------AFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 447 APLLPIPFALAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 501
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 502 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 550
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 243 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 295
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 296 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 332
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 269 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 324 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 359
>gi|74761482|sp|Q9H6T0.1|ESRP2_HUMAN RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|10438126|dbj|BAB15173.1| unnamed protein product [Homo sapiens]
gi|119603620|gb|EAW83214.1| RNA binding motif protein 35B, isoform CRA_a [Homo sapiens]
Length = 727
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGTEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 401 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 460
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 461 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 497
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 399 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 458
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 459 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 513
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 514 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 335
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 336 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 374 VLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 428
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 429 RYIELFRSTAAEVQQVLN 446
>gi|397487054|ref|XP_003814628.1| PREDICTED: epithelial splicing regulatory protein 2, partial [Pan
paniscus]
Length = 713
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 271 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 330
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 331 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 386
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 387 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 446
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 447 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 483
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 474 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 529
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 530 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 589
Query: 171 LYP 173
LYP
Sbjct: 590 LYP 592
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 385 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 444
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 445 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 499
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 500 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 548
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 241 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 293
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 294 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 330
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 267 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 321
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 322 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 357
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 360 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 414
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 415 RYIELFRSTAAEVQQVLN 432
>gi|426382629|ref|XP_004057906.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 717
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGTEGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 448
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 419 RYIELFRSTAAEVQQVLN 436
>gi|417404143|gb|JAA48844.1| Putative rna-binding protein fusilli [Desmodus rotundus]
Length = 717
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 154/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V++F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLEFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 448
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+LEFLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLEFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQ--AALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 419 RYIELFRSTAAEVQQVLN 436
>gi|402908823|ref|XP_003917134.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Papio anubis]
Length = 725
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 283 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 342
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 343 SLEVARFLSREDQVILRLRGLPFSAGPMDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 398
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 399 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 458
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 459 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 495
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AQ H + M
Sbjct: 486 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALATAQRCHKKVM---- 541
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 542 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 601
Query: 171 LYP 173
LYP
Sbjct: 602 LYP 604
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 397 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 456
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 457 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 511
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 512 QGRPSGDAFIQMTSAERALATAQRCHKKVMKERYVEVVPCSTEEMSRVL 560
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 253 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 305
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 306 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 342
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 279 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 333
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL 171
+ + G + +S + +L LP S+ P+
Sbjct: 334 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPM 370
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 372 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 426
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 427 RYIELFRSTAAEVQQVLN 444
>gi|297284292|ref|XP_002802581.1| PREDICTED: epithelial splicing regulatory protein 2-like isoform 2
[Macaca mulatta]
Length = 725
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 283 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 342
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 343 SLEVARFLSREDQVILRLRGLPFSAGPMDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 398
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 399 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 458
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 459 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 495
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AQ H + M
Sbjct: 486 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALATAQRCHKKVM---- 541
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 542 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 601
Query: 171 LYP 173
LYP
Sbjct: 602 LYP 604
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 397 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 456
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 457 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 511
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 512 QGRPSGDAFIQMTSAERALATAQRCHKKVMKERYVEVVPCSTEEMSRVL 560
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 253 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 305
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 306 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 342
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 279 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 333
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL 171
+ + G + +S + +L LP S+ P+
Sbjct: 334 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPM 370
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 372 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 426
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 427 RYIELFRSTAAEVQQVLN 444
>gi|109128999|ref|XP_001098015.1| PREDICTED: epithelial splicing regulatory protein 2-like isoform 1
[Macaca mulatta]
Length = 715
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 273 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 333 SLEVARFLSREDQVILRLRGLPFSAGPMDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 389 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 448
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 449 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 485
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AQ H + M
Sbjct: 476 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALATAQRCHKKVM---- 531
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 532 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 591
Query: 171 LYP 173
LYP
Sbjct: 592 LYP 594
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 387 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 446
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 447 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 501
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 502 QGRPSGDAFIQMTSAERALATAQRCHKKVMKERYVEVVPCSTEEMSRVL 550
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 243 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 295
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 296 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 332
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 269 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL 171
+ + G + +S + +L LP S+ P+
Sbjct: 324 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPM 360
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 362 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 416
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 417 RYIELFRSTAAEVQQVLN 434
>gi|402908821|ref|XP_003917133.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Papio anubis]
Length = 715
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 273 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 333 SLEVARFLSREDQVILRLRGLPFSAGPMDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 389 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 448
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 449 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 485
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AQ H + M
Sbjct: 476 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALATAQRCHKKVM---- 531
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 532 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 591
Query: 171 LYP 173
LYP
Sbjct: 592 LYP 594
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 387 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 446
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 447 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 501
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 502 QGRPSGDAFIQMTSAERALATAQRCHKKVMKERYVEVVPCSTEEMSRVL 550
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 243 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 295
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 296 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 332
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 269 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL 171
+ + G + +S + +L LP S+ P+
Sbjct: 324 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPM 360
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 362 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 416
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 417 RYIELFRSTAAEVQQVLN 434
>gi|355710319|gb|EHH31783.1| hypothetical protein EGK_12921, partial [Macaca mulatta]
Length = 688
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 246 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 305
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 306 SLEVARFLSREDQVILRLRGLPFSAGPMDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 361
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 362 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 421
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 422 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 458
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AQ H + M
Sbjct: 449 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALATAQRCHKKVM---- 504
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 505 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 564
Query: 171 LYP 173
LYP
Sbjct: 565 LYP 567
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 360 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 419
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 420 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 474
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 475 QGRPSGDAFIQMTSAERALATAQRCHKKVMKERYVEVVPCSTEEMSRVL 523
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 216 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 268
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 269 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 305
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 242 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 296
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL 171
+ + G + +S + +L LP S+ P+
Sbjct: 297 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPM 333
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 335 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 389
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 390 RYIELFRSTAAEVQQVLN 407
>gi|355756893|gb|EHH60501.1| hypothetical protein EGM_11873, partial [Macaca fascicularis]
Length = 635
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 193 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 252
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 253 SLEVARFLSREDQVILRLRGLPFSAGPMDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 308
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 309 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 368
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 369 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 405
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AQ H + M
Sbjct: 396 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALATAQRCHKKVM---- 451
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 452 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 511
Query: 171 LYP 173
LYP
Sbjct: 512 LYP 514
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 307 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 366
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 367 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 421
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 422 QGRPSGDAFIQMTSAERALATAQRCHKKVMKERYVEVVPCSTEEMSRVL 470
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 163 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 215
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 216 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 252
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 189 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 243
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPL 171
+ + G + +S + +L LP S+ P+
Sbjct: 244 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPM 280
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 282 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 336
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 337 RYIELFRSTAAEVQQVLN 354
>gi|296478109|tpg|DAA20224.1| TPA: fusilli-like [Bos taurus]
Length = 717
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNR---------YASS 441
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A +I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 448
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAVDIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+++ RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYVEVVPCSTEEMSRVL 552
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++ RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVWARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 118/307 (38%), Gaps = 56/307 (18%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQ--AALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTS-------------PAISPVGKTLLSPGMLPHSSQ- 169
RYIE+F+ + ++ VLN P + G+ + LP+++
Sbjct: 419 RYIELFRSTAAEVQQVLNRYASSPLLPTLTAPLLPIPFPLAAGTGRDCVRLRGLPYTATI 478
Query: 170 ----PLYPQHNTQINPGLSHL----------DPLVNV-HLTQALAQAQ--YAKSQQDNLM 212
+ I P H+ D + + +ALA AQ + K+ ++ +
Sbjct: 479 EDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYV 538
Query: 213 LMNQIAAQQMAALNKPHNMALNGHT--PTLIPAPSPNALMPPPLNSKSTTIPTNLPAL-- 268
+ + ++M+ + + +G + P +P SP A + T IPT AL
Sbjct: 539 EVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYA--TFQATPTLIPTETAALYP 596
Query: 269 ----------PAVPTSGGYFPQFQLPINMN-TAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
PA PT Y+P + MN TA+ P +P P P L
Sbjct: 597 SSALLPAARVPAAPTPVAYYPGPATQLYMNYTAYYPSPPVSPTTVGYLTTP--PAALASA 654
Query: 318 PVHQLNQ 324
P L+Q
Sbjct: 655 PTSVLSQ 661
>gi|329664166|ref|NP_001192614.1| epithelial splicing regulatory protein 2 [Bos taurus]
Length = 717
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNR---------YASS 441
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A +I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 448
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAVDIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+++ RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYVEVVPCSTEEMSRVL 552
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 118/307 (38%), Gaps = 56/307 (18%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQ--AALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTS-------------PAISPVGKTLLSPGMLPHSSQ- 169
RYIE+F+ + ++ VLN P + G+ + LP+++
Sbjct: 419 RYIELFRSTAAEVQQVLNRYASSPLLPTLTAPLLPIPFPLAAGTGRDCVRLRGLPYTATI 478
Query: 170 ----PLYPQHNTQINPGLSHL----------DPLVNV-HLTQALAQAQ--YAKSQQDNLM 212
+ I P H+ D + + +ALA AQ + K+ ++ +
Sbjct: 479 EDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYV 538
Query: 213 LMNQIAAQQMAALNKPHNMALNGHT--PTLIPAPSPNALMPPPLNSKSTTIPTNLPAL-- 268
+ + ++M+ + + +G + P +P SP A + T IPT AL
Sbjct: 539 EVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYA--TFQATPTLIPTETAALYP 596
Query: 269 ----------PAVPTSGGYFPQFQLPINMN-TAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
PA PT Y+P + MN TA+ P +P P P L
Sbjct: 597 SSALLPAARVPAAPTPVAYYPGPATQLYMNYTAYYPSPPVSPTTVGYLTTP--PAALASA 654
Query: 318 PVHQLNQ 324
P L+Q
Sbjct: 655 PTSVLSQ 661
>gi|355686618|gb|AER98119.1| epithelial splicing regulatory protein 2 [Mustela putorius furo]
Length = 650
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 154/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 209 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 268
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ + V+ F G E C V G +G+LFV+ PDG+
Sbjct: 269 SLEVARFLSREDQVILRLRGLPFSAGPEDVLGFL--GPE--CPVTGGADGLLFVRHPDGR 324
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 325 PTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNR---------YASS 375
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 376 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 421
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 412 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQGCHKKVM---- 467
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 468 KERYVEVVPCSTEEMSRVLMGGTLSRSGMSPPPCKLPCLSPPTYATFQATPTLIPAETAA 527
Query: 171 LYP 173
LYP
Sbjct: 528 LYP 530
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 323 GRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 382
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 383 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 437
Query: 483 DGKATGDAFVLFEKEEEA-DKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A HK+ + RY+E+ +T E+ +VL
Sbjct: 438 QGRPSGDAFIQMTSAERALAAAQGCHKKVMKERYVEVVPCSTEEMSRVL 486
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 179 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 231
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 232 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 268
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 205 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 259
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 260 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 295
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E +L FLG E G+ V + G+P+G+AF E A A LR ++ I GK
Sbjct: 296 EDVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQ--AALRRHKG-ILGK 352
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 353 --RYIELFRSTAAEVQQVLN 370
>gi|72092573|ref|XP_792820.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Strongylocentrotus purpuratus]
Length = 752
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 161/258 (62%), Gaps = 26/258 (10%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCL+ GRRNGE +V F E RDMAL+RHKH++ KRY+EV KA G++FI VA
Sbjct: 245 IARGGVALCLNTHGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYVEVFKATGDEFIRVA 304
Query: 423 GGNNNEAQAFLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G + EA FL R +I+RMRGLP+ + K V+DFF G E V GEEG+LFVK+
Sbjct: 305 AGTSKEATLFLARDEGHIIVRMRGLPFTASEKDVVDFF--GPE--IPVAGGEEGILFVKQ 360
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
+GK TGDAFVLF E+ KALSKH+E +G RYIE+FRSTTAEVQQVL++ P
Sbjct: 361 KNGKMTGDAFVLFASEDAVSKALSKHREYLGNRYIEIFRSTTAEVQQVLSRVQSEPIMAD 420
Query: 542 LTSSNNGLSAQQPMLSHLAQVPVPYL------------PQHIITSGTRKDCIRLRGLPYE 589
+ QQ ++ + +P+ + H IT+G +DCIR+RGLPY
Sbjct: 421 I--------PQQQVMPPMIPIPIHAMPPHHPHQPPPPPHPHFITAGVVRDCIRMRGLPYN 472
Query: 590 ALCILMDIFFVGQQDSFV 607
A I + F+G+ F+
Sbjct: 473 A-SIEDIMLFLGEAAQFI 489
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E I+ FLGE A I GVHMV N QG+P+GEAFIQM S A LAAQ H + M
Sbjct: 475 IEDIMLFLGEAAQFIRPHGVHMVLNLQGKPNGEAFIQMTSAERACLAAQTCHMKYM---- 530
Query: 122 KQRYIEVFQCSGEDMNLVLNGVL------PPTSPAISPVGKTLLSPGMLPHSSQPLYPQH 175
++RY+EVFQCSGE+M +VL + P AISP P PH +Q +P H
Sbjct: 531 RERYVEVFQCSGEEMQMVLTSGMRNEKAQQPQINAISPTTPLHYPPPNHPH-AQLTHPGH 589
Query: 176 NTQINPG 182
++ G
Sbjct: 590 MPPVSAG 596
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
++ RGLP++ + + V FF+ N+ G GV G+ G+ V FE E+
Sbjct: 222 VKARGLPWQASDRDVFRFFKG-----LNIARG--GVALCLNTHGRRNGEVMVHFESSEQR 274
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK ++G RY+E+F++T E +V T
Sbjct: 275 DMALQRHKHNLGKRYVEVFKATGDEFIRVAAGT 307
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 55/243 (22%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ G+ G+A V F ++ AL +H+ ++ RYIE+ ++ + V
Sbjct: 351 GEEGILFVKQKNGKMTGDAFVLFASEDAVSKALSKHREYLGNRYIEIFRSTTAEVQQVLS 410
Query: 424 GNNNE-----------------------------------AQAFLTRG-AQVIIRMRGLP 447
+E F+T G + IRMRGLP
Sbjct: 411 RVQSEPIMADIPQQQVMPPMIPIPIHAMPPHHPHQPPPPPHPHFITAGVVRDCIRMRGLP 470
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSK 506
Y + + ++ F + GV V GK G+AF+ E A A +
Sbjct: 471 YNASIEDIMLFLGEAAQ-----FIRPHGVHMVLNLQGKPNGEAFIQMTSAERACLAAQTC 525
Query: 507 HKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA-QVPVP 565
H + + RY+E+F+ + E+Q VL M K AQQP ++ ++ P+
Sbjct: 526 HMKYMRERYVEVFQCSGEEMQMVLTSGMRNEK------------AQQPQINAISPTTPLH 573
Query: 566 YLP 568
Y P
Sbjct: 574 YPP 576
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+ G+ +GE + +S +A Q RH N+ GK RY+EVF+ +G+
Sbjct: 244 NIARGGVALCLNTHGRRNGEVMVHFESSEQRDMALQ-RHKHNL--GK--RYVEVFKATGD 298
Query: 135 DMNLVLNGV 143
+ V G
Sbjct: 299 EFIRVAAGT 307
>gi|301775691|ref|XP_002923260.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Ailuropoda melanoleuca]
gi|281349933|gb|EFB25517.1| hypothetical protein PANDA_012380 [Ailuropoda melanoleuca]
Length = 723
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 281 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 340
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 341 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 396
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 397 PTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNR---------YASS 447
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 448 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 493
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 484 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 539
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 540 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 599
Query: 171 LYP 173
LYP
Sbjct: 600 LYP 602
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 395 GRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 454
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 455 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 509
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 510 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 558
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 251 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 303
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 304 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 340
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 277 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 331
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 332 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 367
>gi|73957227|ref|XP_851504.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Canis lupus familiaris]
Length = 717
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNR---------YASS 441
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 PLLPALT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPAETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNRYASSPLLPALT 448
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
>gi|390333349|ref|XP_003723691.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Strongylocentrotus purpuratus]
Length = 720
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 161/258 (62%), Gaps = 26/258 (10%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCL+ GRRNGE +V F E RDMAL+RHKH++ KRY+EV KA G++FI VA
Sbjct: 245 IARGGVALCLNTHGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYVEVFKATGDEFIRVA 304
Query: 423 GGNNNEAQAFLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G + EA FL R +I+RMRGLP+ + K V+DFF G E V GEEG+LFVK+
Sbjct: 305 AGTSKEATLFLARDEGHIIVRMRGLPFTASEKDVVDFF--GPE--IPVAGGEEGILFVKQ 360
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
+GK TGDAFVLF E+ KALSKH+E +G RYIE+FRSTTAEVQQVL++ P
Sbjct: 361 KNGKMTGDAFVLFASEDAVSKALSKHREYLGNRYIEIFRSTTAEVQQVLSRVQSEPIMAD 420
Query: 542 LTSSNNGLSAQQPMLSHLAQVPVPYL------------PQHIITSGTRKDCIRLRGLPYE 589
+ QQ ++ + +P+ + H IT+G +DCIR+RGLPY
Sbjct: 421 I--------PQQQVMPPMIPIPIHAMPPHHPHQPPPPPHPHFITAGVVRDCIRMRGLPYN 472
Query: 590 ALCILMDIFFVGQQDSFV 607
A I + F+G+ F+
Sbjct: 473 A-SIEDIMLFLGEAAQFI 489
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E I+ FLGE A I GVHMV N QG+P+GEAFIQM S A LAAQ H + M
Sbjct: 475 IEDIMLFLGEAAQFIRPHGVHMVLNLQGKPNGEAFIQMTSAERACLAAQTCHMKYM---- 530
Query: 122 KQRYIEVFQCSGEDMNLVLNGVL------PPTSPAISPVGKTLLSPGMLPHSSQPLYPQH 175
++RY+EVFQCSGE+M +VL + P AISP P PH +Q +P H
Sbjct: 531 RERYVEVFQCSGEEMQMVLTSGMRNEKAQQPQINAISPTTPLHYPPPNHPH-AQLTHPGH 589
Query: 176 NTQINPG 182
++ G
Sbjct: 590 MPPVSAG 596
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
++ RGLP++ + + V FF+ N+ G GV G+ G+ V FE E+
Sbjct: 222 VKARGLPWQASDRDVFRFFKG-----LNIARG--GVALCLNTHGRRNGEVMVHFESSEQR 274
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK ++G RY+E+F++T E +V T
Sbjct: 275 DMALQRHKHNLGKRYVEVFKATGDEFIRVAAGT 307
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 55/243 (22%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ G+ G+A V F ++ AL +H+ ++ RYIE+ ++ + V
Sbjct: 351 GEEGILFVKQKNGKMTGDAFVLFASEDAVSKALSKHREYLGNRYIEIFRSTTAEVQQVLS 410
Query: 424 GNNNE-----------------------------------AQAFLTRG-AQVIIRMRGLP 447
+E F+T G + IRMRGLP
Sbjct: 411 RVQSEPIMADIPQQQVMPPMIPIPIHAMPPHHPHQPPPPPHPHFITAGVVRDCIRMRGLP 470
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD-KALSK 506
Y + + ++ F + GV V GK G+AF+ E A A +
Sbjct: 471 YNASIEDIMLFLGEAAQ-----FIRPHGVHMVLNLQGKPNGEAFIQMTSAERACLAAQTC 525
Query: 507 HKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA-QVPVP 565
H + + RY+E+F+ + E+Q VL M K AQQP ++ ++ P+
Sbjct: 526 HMKYMRERYVEVFQCSGEEMQMVLTSGMRNEK------------AQQPQINAISPTTPLH 573
Query: 566 YLP 568
Y P
Sbjct: 574 YPP 576
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+ G+ +GE + +S +A Q RH N+ +RY+EVF+ +G+
Sbjct: 244 NIARGGVALCLNTHGRRNGEVMVHFESSEQRDMALQ-RHKHNL----GKRYVEVFKATGD 298
Query: 135 DMNLVLNGV 143
+ V G
Sbjct: 299 EFIRVAAGT 307
>gi|410983807|ref|XP_003998228.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Felis catus]
Length = 717
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNR---------YASS 441
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGLSPPPCKLPCLSPPTYATFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 448
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
>gi|410983809|ref|XP_003998229.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Felis catus]
Length = 726
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 284 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 343
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 344 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 399
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 400 PTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNR---------YASS 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 496
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 487 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 542
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 543 KERYVEVVPCSTEEMSRVLMGGTLGRSGLSPPPCKLPCLSPPTYATFQATPTLIPTETAA 602
Query: 171 LYP 173
LYP
Sbjct: 603 LYP 605
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 398 GRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 457
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 458 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 512
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 513 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 561
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 254 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 306
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 307 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 343
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 280 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 334
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 335 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 370
>gi|395853861|ref|XP_003799417.1| PREDICTED: epithelial splicing regulatory protein 2 [Otolemur
garnettii]
Length = 715
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 273 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGIRYIEVYKATGEEFVKIAGGT 332
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 333 SIEVARFLSREDQVILRLRGLPFSAGPPDVLGFL--GPE--CPVTGGAEGLLFVRHPDGR 388
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIE+FRST AEVQQVLN+ SS
Sbjct: 389 PTGDAFALFACEELAQAALRRHKGMLGKRYIEIFRSTAAEVQQVLNR---------YASS 439
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 440 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 485
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A +I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 476 IEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 531
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 532 KERYVEVVPCSTEEMSRVLIGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 591
Query: 171 LYP 173
LYP
Sbjct: 592 LYP 594
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 387 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIEIFRSTAAEVQQVLNRYASSPLLPTLT 446
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 447 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAVDIR--PHGVHMVLNQ 501
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 502 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 550
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 243 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 295
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +GIRYIE++++T E ++ T
Sbjct: 296 SEQRDLALQRHKHHMGIRYIEVYKATGEEFVKIAGGT 332
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 269 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHMGI----RYIEVYKATGE 323
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 324 EFVKIAGGTSIEVARFLSREDQVILRLRGLPFSAGP 359
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 362 VLGFLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 416
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 417 RYIEIFRSTAAEVQQVLN 434
>gi|431917858|gb|ELK17089.1| Epithelial splicing regulatory protein 1 [Pteropus alecto]
Length = 680
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/258 (48%), Positives = 160/258 (62%), Gaps = 28/258 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 220 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 279
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 280 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 335
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL--- 542
TGDAFVLF EE A AL KHK+ +G RYIELFRST A+ + +L E +L
Sbjct: 336 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAADAESIL-LVFEHVGGFALFLF 394
Query: 543 TSSNN--------GLSAQQPMLSHLAQVPVPY---------LPQHIITSGTRKDCIRLRG 585
S NN L + +L+ + P+ LPQ + +DCIRLRG
Sbjct: 395 ISENNPTFFIVKVKLGKYRHVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRG 454
Query: 586 LPYEALCILMDIF-FVGQ 602
LPY A + DI F+G+
Sbjct: 455 LPYAA--TIEDILDFLGE 470
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 461 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 516
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 517 KDRYVEVFQCSAEEMNFVLMG 537
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G G+ GR G+A V F +E+ AL++HK + KRYIE+ T A+ E +
Sbjct: 322 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAADAESILL 381
Query: 421 V---AGG-------NNNEAQAFLTR----------------------------------- 435
V GG + N F+ +
Sbjct: 382 VFEHVGGFALFLFISENNPTFFIVKVKLGKYRHVLNRFSSAPLIPLPTPPIIPVLPQQFV 441
Query: 436 ---GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+ IR+RGLPY T + ++DF E S ++ GV V G+ +GDAF+
Sbjct: 442 PPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVLNHQGRPSGDAFI 496
Query: 493 LFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
+ + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 497 QMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 535
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 192 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 244
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 245 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL---- 300
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
P + +V V + QH +G ++
Sbjct: 301 PFTATADEV-VAFFGQHCPITGGKE 324
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 216 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 270
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 271 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 304
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|28849887|ref|NP_789808.1| epithelial splicing regulatory protein 2 [Mus musculus]
gi|81914552|sp|Q8K0G8.1|ESRP2_MOUSE RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|21618665|gb|AAH31444.1| RNA binding motif protein 35b [Mus musculus]
gi|148679398|gb|EDL11345.1| RNA binding motif protein 35b [Mus musculus]
Length = 717
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQATPALIPTETTA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLT 448
Query: 422 ----------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
AGG + +R+RGLPY T + ++ F E + ++
Sbjct: 449 APLLPIPFPLAGGTGRDC-----------VRLRGLPYTATIEDILSFL---GEAAADIR- 493
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 494 -PHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMMKERYVEVVPCSTEEMSRVL 552
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVDS 298
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 299 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
>gi|157818053|ref|NP_001100893.1| epithelial splicing regulatory protein 2 [Rattus norvegicus]
gi|149038076|gb|EDL92436.1| RNA binding motif protein 35b (predicted) [Rattus norvegicus]
Length = 717
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+DF G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLDFL--GPE--CPVTGGVDGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP SP ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQASPALIPTETTA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 41/192 (21%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-- 421
G+ G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 377 GVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 436
Query: 422 ----------------------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
AGG + +R+RGLPY T + ++ F
Sbjct: 437 RYAASPLLPTLTAPLLPIPFPLAGGTGRDC-----------VRLRGLPYTATIEDILSFL 485
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIEL 518
E + ++ GV V G+ +GDAF+ E A A + HK+ + RY+E+
Sbjct: 486 ---GEAAADIR--PHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEV 540
Query: 519 FRSTTAEVQQVL 530
+T E+ +VL
Sbjct: 541 VPCSTEEMSRVL 552
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 298
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 299 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L+FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 419 RYIELFRSTAAEVQQVLN 436
>gi|229485446|sp|B2RYJ8.1|ESRP2_RAT RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|187469463|gb|AAI66804.1| Rbm35b protein [Rattus norvegicus]
Length = 716
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 274 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 333
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+DF G E C V G +G+LFV+ PDG+
Sbjct: 334 SLEVARFLSREDQVILRLRGLPFSAGPADVLDFL--GPE--CPVTGGVDGLLFVRHPDGR 389
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 390 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAP 449
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 450 LL-------------PIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 486
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 477 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVM---- 532
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP SP ++P +
Sbjct: 533 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQASPALIPTETTA 592
Query: 171 LYP 173
LYP
Sbjct: 593 LYP 595
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 41/192 (21%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-- 421
G+ G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 376 GVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 435
Query: 422 ----------------------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
AGG + +R+RGLPY T + ++ F
Sbjct: 436 RYAASPLLPTLTAPLLPIPFPLAGGTGRDC-----------VRLRGLPYTATIEDILSFL 484
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIEL 518
E + ++ GV V G+ +GDAF+ E A A + HK+ + RY+E+
Sbjct: 485 ---GEAAADIR--PHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEV 539
Query: 519 FRSTTAEVQQVL 530
+T E+ +VL
Sbjct: 540 VPCSTEEMSRVL 551
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 245 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 297
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 333
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M RYIEV++ +GE
Sbjct: 270 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 324
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 325 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 360
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L+FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 363 VLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 417
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 418 RYIELFRSTAAEVQQVLN 435
>gi|354484335|ref|XP_003504344.1| PREDICTED: epithelial splicing regulatory protein 2 [Cricetulus
griseus]
Length = 707
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 150/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 265 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 324
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 325 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGADGLLFVRHPDGR 380
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE+A AL +HK +G RYIELFRST AEVQQVLN+ TS
Sbjct: 381 PTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYA--------TSP 432
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L +P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 433 LLPTLTAP-----LLPIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 477
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 468 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSSERALAAAQRCHKKVM---- 523
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 524 KERYVEVVPCSTEEMSRVLMGGSLSRSGMSPPPCKLPCLSPPTYATFQATPALIPTETTA 583
Query: 171 LYP 173
LYP
Sbjct: 584 LYP 586
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 379 GRPTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYATSPLLPTLT 438
Query: 422 ----------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
AGG + +R+RGLPY T + ++ F E + ++
Sbjct: 439 APLLPIPFPLAGGTGRD-----------CVRLRGLPYTATIEDILSFL---GEAAADIR- 483
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 484 -PHGVHMVLNQQGRPSGDAFIQMMSSERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 542
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 236 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 288
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 289 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 324
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M RYIEV++ +GE
Sbjct: 261 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHMGV----RYIEVYKATGE 315
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 316 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 351
>gi|426242551|ref|XP_004015136.1| PREDICTED: epithelial splicing regulatory protein 2 [Ovis aries]
Length = 591
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 154/241 (63%), Gaps = 26/241 (10%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +A
Sbjct: 146 IARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIA 205
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ P
Sbjct: 206 GGTSLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHP 261
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+
Sbjct: 262 DGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNR---------Y 312
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVG 601
SS + + L +P P + +G+ +DC+RLRGLPY A + DI F+G
Sbjct: 313 ASSPLLPTLT----APLLPIPFP------LAAGSGRDCVRLRGLPYTA--TIEDILSFLG 360
Query: 602 Q 602
+
Sbjct: 361 E 361
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 352 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAM---- 407
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 408 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFQATPTLIPTETAA 467
Query: 171 LYP 173
LYP
Sbjct: 468 LYP 470
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + V +
Sbjct: 263 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSPLLPTLT 322
Query: 433 ---------LTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G+ + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 323 APLLPIPFPLAAGSGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 377
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+++ RY+E+ +T E+ +VL
Sbjct: 378 QGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYVEVVPCSTEEMSRVL 426
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 119 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 171
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 172 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 208
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 145 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 199
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 200 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 235
>gi|344253993|gb|EGW10097.1| Epithelial splicing regulatory protein 2 [Cricetulus griseus]
Length = 697
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 150/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 255 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 314
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 315 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGADGLLFVRHPDGR 370
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE+A AL +HK +G RYIELFRST AEVQQVLN+ TS
Sbjct: 371 PTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYA--------TSP 422
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L +P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 423 LLPTLTAP-----LLPIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 467
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 458 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSSERALAAAQRCHKKVM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 514 KERYVEVVPCSTEEMSRVLMGGSLSRSGMSPPPCKLPCLSPPTYATFQATPALIPTETTA 573
Query: 171 LYP 173
LYP
Sbjct: 574 LYP 576
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 369 GRPTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYATSPLLPTLT 428
Query: 422 ----------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
AGG + +R+RGLPY T + ++ F E + ++
Sbjct: 429 APLLPIPFPLAGGTGRD-----------CVRLRGLPYTATIEDILSFL---GEAAADIR- 473
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 474 -PHGVHMVLNQQGRPSGDAFIQMMSSERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 532
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 226 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 278
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 279 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 314
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M RYIEV++ +GE
Sbjct: 251 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHMGV----RYIEVYKATGE 305
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 306 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 341
>gi|395512150|ref|XP_003760307.1| PREDICTED: epithelial splicing regulatory protein 1 [Sarcophilus
harrisii]
Length = 550
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 138/195 (70%), Gaps = 14/195 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF----GQHCPITGGKEGILFVTYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN--------KTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQ N K +++P
Sbjct: 368 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQGRNLVHVKNADKNLDIP 427
Query: 538 KNNSLTSS--NNGLS 550
N+ L S N+ LS
Sbjct: 428 SNSHLKDSKKNDSLS 442
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 224 TIVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 276
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 277 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ + + QH +G ++
Sbjct: 334 --FTATAEEVLAFFGQHCPITGGKE 356
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 336
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|345308102|ref|XP_001505380.2| PREDICTED: epithelial splicing regulatory protein 2-like
[Ornithorhynchus anatinus]
Length = 729
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 144/225 (64%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ +HRD+AL+RHKHH+ RYIEV KA G++F+ +AGG
Sbjct: 274 GGVALCLNAQGRRNGEALVRFVNSDHRDLALERHKHHMGSRYIEVYKATGDEFLKIAGGT 333
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL+R QVIIR+RGLP+ T V+ F G E C V G EG+LFV+ PDG+
Sbjct: 334 SNEVAQFLSRENQVIIRLRGLPFSATPDDVLGFL--GPE--CPVTGGPEGLLFVRYPDGR 389
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF E+ A AL +HK +G RYIELFRST AEVQQVLN+ + P +L
Sbjct: 390 PTGDAFALFACEDAAQSALRRHKGILGKRYIELFRSTAAEVQQVLNRYLSAPLIPTLPPP 449
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ + + +DC+RLRGLPY A
Sbjct: 450 LLPVLPP----------------PYALAGSCVRDCVRLRGLPYTA 478
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 13/101 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ +L+F+GE ++I GVHMV N QG+PSG+AFIQM S A +AAQ H + M
Sbjct: 480 IDDVLDFMGEATADIRPHGVHMVLNQQGRPSGDAFIQMKSAERAQVAAQRCHKKMM---- 535
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISP 153
K+RY+EVF CSG++M+LVL +G+ PP P +SP
Sbjct: 536 KERYVEVFPCSGDEMSLVLMGGSLNRSGLSPPPCKLPCLSP 576
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A F ++ AL+RHK + KRYIE+ ++ + V
Sbjct: 388 GRPTGDAFALFACEDAAQSALRRHKGILGKRYIELFRSTAAEVQQVLNRYLSAPLIPTLP 447
Query: 422 AGGNNNEAQAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
+ G+ V +R+RGLPY V+DF T + GV V
Sbjct: 448 PPLLPVLPPPYALAGSCVRDCVRLRGLPYTAGIDDVLDFMGEATADI-----RPHGVHMV 502
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + E A A + HK+ + RY+E+F + E+ VL
Sbjct: 503 LNQQGRPSGDAFIQMKSAERAQVAAQRCHKKMMKERYVEVFPCSGDEMSLVL 554
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 395 ALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQ 454
+L+ H D + E N G N++++ ++ +IR RGLP++ + +
Sbjct: 209 SLRSKDHGTDDGFTEPETVN----YKYETGPCNKSESV---DSETVIRARGLPWQSSDQH 261
Query: 455 VIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIR 514
+ FF N+ G GV G+ G+A V F + D AL +HK +G R
Sbjct: 262 IARFFIG-----LNIAKG--GVALCLNAQGRRNGEALVRFVNSDHRDLALERHKHHMGSR 314
Query: 515 YIELFRSTTAEVQQVLNKT 533
YIE++++T E ++ T
Sbjct: 315 YIEVYKATGDEFLKIAGGT 333
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
+ F ATAG QG LGSDE+EIILL++ ++D + KV
Sbjct: 12 LLFGATAGAQGAKLGSDEREIILLVWQVVDLHGEKV 47
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+HI F NI GV + N+QG+ +GEA ++ + LA + RH +M
Sbjct: 260 QHIARFF--IGLNIAKGGVALCLNAQGRRNGEALVRFVNSDHRDLALE-RHKHHM----G 312
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
RYIEV++ +G++ + G + +S + ++ LP S+ P
Sbjct: 313 SRYIEVYKATGDEFLKIAGGTSNEVAQFLSRENQVIIRLRGLPFSATP 360
>gi|444709335|gb|ELW50356.1| Epithelial splicing regulatory protein 2 [Tupaia chinensis]
Length = 848
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 149/238 (62%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 406 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 465
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F C V G EG+LFV+ PDG+
Sbjct: 466 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFLGP----DCPVTGGAEGLLFVRHPDGR 521
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQ L + SS
Sbjct: 522 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQALTR---------YASS 572
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 573 PLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDILSFLGE 618
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 609 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 664
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 665 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPALIPTETAA 724
Query: 171 LYP 173
LYP
Sbjct: 725 LYP 727
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 41/180 (22%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR G+A F +E AL+RHK + KRYIE+ ++ E Q LTR
Sbjct: 520 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAA-----------EVQQALTR 568
Query: 436 GA------------------------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
A + +R+RGLPY T + ++ F E + ++
Sbjct: 569 YASSPLLPTLTAPLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR- 624
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 625 -PHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 683
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF N+ G GV G+ G+A + F
Sbjct: 376 SETVVRARGLPWQSSDQDVARFF-----RGLNIARG--GVALCLNAQGRRNGEALIRFVD 428
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 429 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 465
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 402 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHMGV----RYIEVYKATGE 456
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 457 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 492
>gi|291390369|ref|XP_002711679.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Oryctolagus cuniculus]
Length = 719
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 151/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 277 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 336
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 337 SLEVARFLSREDQVILRLRGLPFSAGPTDVLSFL--GPE--CPVTGGADGLLFVRHPDGR 392
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ SS
Sbjct: 393 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNR---------YASS 443
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ + P+L + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 444 SLLPTLTAPLLPLPFPL----------APGTGRDCVRLRGLPYTA--TIEDILSFLGE 489
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 480 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRSHKKVM---- 535
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 536 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTDTAA 595
Query: 171 LY 172
LY
Sbjct: 596 LY 597
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAGGNNNEAQAF 432
GR G+A F +E AL+RHK + KRYIE+ T A + +N ++
Sbjct: 391 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSSLLPTLT 450
Query: 433 LTRG----------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 451 APLLPLPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 505
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 506 QGRPSGDAFIQMTSAERALAAAQRSHKKVMKERYVEVVPCSTEEMSRVL 554
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 247 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 299
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 300 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 336
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 273 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 327
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 328 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 363
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 366 VLSFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQ--AALRRHKGML---GK 420
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 421 RYIELFRSTAAEVQQVLN 438
>gi|344250517|gb|EGW06621.1| Epithelial splicing regulatory protein 1 [Cricetulus griseus]
Length = 677
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/163 (61%), Positives = 124/163 (76%), Gaps = 4/163 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 101 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 160
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 161 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 216
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQ
Sbjct: 217 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQ 259
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 88 QGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL------- 140
QG+PSG+AFIQM S A++AAQ H + M K RY+EVFQCS E+MN VL
Sbjct: 259 QGRPSGDAFIQMKSADRAFMAAQKYHKKTM----KDRYVEVFQCSAEEMNFVLMGGTLNR 314
Query: 141 NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
NG+ PP P +SP T +P + + +Y
Sbjct: 315 NGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 348
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 73 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 125
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 126 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 182
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 183 --FTATAEEVVAFFGQHCPITGGKE 205
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 119/349 (34%), Gaps = 72/349 (20%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 97 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 151
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP------------------------ 170
D + G + +S + ++ LP ++
Sbjct: 152 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVT 211
Query: 171 ------------LYPQHNTQINPGLSHLDPLVNVHL---TQALAQAQYAKSQQDNLMLMN 215
L+ N H D L ++ A+ Q + D + M
Sbjct: 212 YPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQGRPSGDAFIQMK 271
Query: 216 QIAAQQMAALNKPHNMALNGHTPTLIPAPSP-------------NALMPPPLNSKSTTIP 262
MAA K H + + + N L PPP + P
Sbjct: 272 SADRAFMAA-QKYHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPP 330
Query: 263 T-NLPALPAV-PTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFN----MPRMPVTPQVL 314
+ PA AV PT Y P P + + P T F N P P +P L
Sbjct: 331 SYTFPAPAAVIPTEAAIYQPSLLFSPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSL 390
Query: 315 PKFPV-HQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQV 362
FP L+ P P PG V + L N + +LN GY+++
Sbjct: 391 GYFPTAANLSSVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQEL 434
>gi|344290717|ref|XP_003417084.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 2-like [Loxodonta africana]
Length = 717
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGIRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVVRFLSREDQVILRLRGLPFSAGPADVLAFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL + +G RYIELFRST AEVQQ+LN+ SS
Sbjct: 391 PTGDAFALFACEELAQAALRSXQGMLGKRYIELFRSTAAEVQQILNR---------YASS 441
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
S + + L +P P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 ----SLLPTLTAPLLPIPFP------LVAGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFHATPALIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVIRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +GIRYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGIRYIEVYKATGEEFVKIAGGT 334
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAGGNNNEAQA- 431
GR G+A F +E AL+ + + KRYIE+ T A + +N ++
Sbjct: 389 GRPTGDAFALFACEELAQAALRSXQGMLGKRYIELFRSTAAEVQQILNRYASSSLLPTLT 448
Query: 432 ---------FLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 449 APLLPIPFPLVAGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 503
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 504 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHMGI----RYIEVYKATGE 325
Query: 135 DMNLVLNGV 143
+ + G
Sbjct: 326 EFVKIAGGT 334
>gi|397500915|ref|XP_003821148.1| PREDICTED: epithelial splicing regulatory protein 1-like [Pan
paniscus]
Length = 422
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 125/164 (76%), Gaps = 4/164 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQV
Sbjct: 368 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV 411
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 224 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 276
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 277 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 334 --FTATAEEVVAFFGQHCPITGGKE 356
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 336
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>gi|440905418|gb|ELR55795.1| Epithelial splicing regulatory protein 2, partial [Bos grunniens
mutus]
Length = 759
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 152/245 (62%), Gaps = 33/245 (13%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG+
Sbjct: 310 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGD 369
Query: 426 NN-------EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
++ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LF
Sbjct: 370 SHAPPPPPLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLF 425
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
V+ PDG+ TGDAF LF EE A AL +HK +G RYIELFRST AEVQQ
Sbjct: 426 VRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQ---------P 476
Query: 539 NNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF 598
S SS + + L +P P + +GT +DC+RLRGLPY A + DI
Sbjct: 477 AASFPSSPLLPTLT----APLLPIPFP------LAAGTGRDCVRLRGLPYTA--TIEDIL 524
Query: 599 -FVGQ 602
F+G+
Sbjct: 525 SFLGE 529
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A +I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 520 IEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAM---- 575
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 576 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFQATPTLIPTETAA 635
Query: 171 LYP 173
LYP
Sbjct: 636 LYP 638
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--- 432
GR G+A F +E AL+RHK + KRYIE+ ++ + A +
Sbjct: 431 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQPAASFPSSPLLPTLT 490
Query: 433 ---------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 491 APLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL---GEAAVDIR--PHGVHMVLNQ 545
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+++ RY+E+ +T E+ +VL
Sbjct: 546 QGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYVEVVPCSTEEMSRVL 594
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 32/154 (20%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 280 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 332
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E+ D AL +HK +G+RYIE++++T E ++ P L + L
Sbjct: 333 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGDSHAPPPPPLEVAR--------FL 384
Query: 557 SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
S QV +RLRGLP+ A
Sbjct: 385 SREDQV-----------------ILRLRGLPFSA 401
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 306 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 360
Query: 135 DMNLVLNG 142
+ + G
Sbjct: 361 EFVKIAGG 368
>gi|198421641|ref|XP_002120551.1| PREDICTED: similar to RNA-binding protein 35B (RNA-binding motif
protein 35B) [Ciona intestinalis]
Length = 772
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 147/228 (64%), Gaps = 27/228 (11%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG AL L+ GRRNGEA+VRF +++ RD+AL RHKHH+ RYIEV +A+G++F+ VA G+
Sbjct: 281 GGAALVLNPQGRRNGEALVRFENEQQRDLALLRHKHHMASRYIEVYRASGDEFLKVAAGS 340
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA FL++ + I+RMRGLP+ + +++FF + V GEEGVL VK DG+
Sbjct: 341 SCEAIHFLSKEGEAIVRMRGLPFTAGPRDIVEFF----GDEIPVAHGEEGVLLVKFADGR 396
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF E+ A AL+KHK ++G RY+E+F+ST AEVQQVL++ M P
Sbjct: 397 PTGDAFVLFTSEKFAVAALNKHKLTLGKRYVEIFKSTAAEVQQVLSRHMTSPI------- 449
Query: 546 NNGLSAQQPMLSHLAQVPVPYL---PQHIITSGTRKDCIRLRGLPYEA 590
+ +P P++ PQ + +G ++CIRLRG+PY A
Sbjct: 450 -------------IPTMPSPHILPPPQQPVPAGAIRNCIRLRGMPYSA 484
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDS-EHSAYLAAQLR----HNRN 116
VE I FLGE A++I+ G+HMV N QG+PSG+AFIQ+ S E + A + H R+
Sbjct: 486 VEDITSFLGELANSILPHGIHMVLNQQGRPSGDAFIQLSSVEKCSQAALDVSKGGCHKRH 545
Query: 117 MIFGKKQRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGMLPHSSQ 169
M +RY+EVFQCSG++MN+VL NG+LPP AI P LP ++
Sbjct: 546 M----GERYVEVFQCSGDEMNMVLMGGTLNRNGMLPPPGMAILSQEPVPAPPVSLPATNF 601
Query: 170 PLYP 173
P +P
Sbjct: 602 PAHP 605
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 27/228 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV L A GR G+A V F ++ AL +HK + KRY+E+ K+ + V
Sbjct: 383 GEEGVLLVKFADGRPTGDAFVLFTSEKFAVAALNKHKLTLGKRYVEIFKSTAAEVQQVLS 442
Query: 424 GNNNE--------------AQAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
+ Q + GA + IR+RG+PY T + + F E + +
Sbjct: 443 RHMTSPIIPTMPSPHILPPPQQPVPAGAIRNCIRLRGMPYSATVEDITSFL---GELANS 499
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKA---LSK---HKESIGIRYIELFRST 522
++ G+ V G+ +GDAF+ E+ +A +SK HK +G RY+E+F+ +
Sbjct: 500 IL--PHGIHMVLNQQGRPSGDAFIQLSSVEKCSQAALDVSKGGCHKRHMGERYVEVFQCS 557
Query: 523 TAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQH 570
E+ VL L +N L + +Q+P+ + +P P H
Sbjct: 558 GDEMNMVLMGGT-LNRNGMLPPPGMAILSQEPVPAPPVSLPATNFPAH 604
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + V FF+ N+ G G V P G+ G+A V FE E+
Sbjct: 253 TVVRARGLPWQASDHDVARFFKG-----LNIPRG--GAALVLNPQGRRNGEALVRFENEQ 305
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+ D AL +HK + RYIE++R++ E +V
Sbjct: 306 QRDLALLRHKHHMASRYIEVYRASGDEFLKV 336
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G +V N QG+ +GEA ++ ++E LA LRH +M RYIEV++ SG+
Sbjct: 277 NIPRGGAALVLNPQGRRNGEALVRFENEQQRDLAL-LRHKHHM----ASRYIEVYRASGD 331
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ V G +S G+ ++ LP ++ P
Sbjct: 332 EFLKVAAGSSCEAIHFLSKEGEAIVRMRGLPFTAGP 367
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 121/306 (39%), Gaps = 63/306 (20%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
I+EF G E +GV +V + G+P+G+AF+ SE A +AA +H + GK
Sbjct: 370 IVEFFGDEIPVAHGEEGVLLVKFADGRPTGDAFVLFTSEKFA-VAALNKHK--LTLGK-- 424
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQ--------- 174
RY+E+F+ + ++ VL+ + SP+ T+ SP +LP QP+
Sbjct: 425 RYVEIFKSTAAEVQQVLSRHM------TSPIIPTMPSPHILPPPQQPVPAGAIRNCIRLR 478
Query: 175 ---HNTQINPGLSHLDPLVNVHLTQALAQA--QYAKSQQDNLMLMNQIAAQQMAALN--- 226
++ + S L L N L + Q + D + ++ + AAL+
Sbjct: 479 GMPYSATVEDITSFLGELANSILPHGIHMVLNQQGRPSGDAFIQLSSVEKCSQAALDVSK 538
Query: 227 ----KPH----------------NMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLP 266
K H NM L G T N ++PPP + + P P
Sbjct: 539 GGCHKRHMGERYVEVFQCSGDEMNMVLMGGTLNR------NGMLPPPGMAILSQEPVPAP 592
Query: 267 ALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTP 326
+ T+ P P + T H M TP +P T + P P+ ++
Sbjct: 593 PVSLPATNFPAHPPVSAPFILQTPHGTLLMQTP-------LPQTSGIQPAHPI-EIIHPH 644
Query: 327 TVYTIP 332
T++T P
Sbjct: 645 TLFTAP 650
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G V +RM+G+PY ++ FF+ NS E + + + TG+A V F
Sbjct: 693 GNGVQVRMQGMPYNAGVADIMAFFKGYNLNS-------ESIKLIYNDKLRPTGEALVTFP 745
Query: 496 KEEEADKA-LSKHKESIGIRYIELF 519
EE+ +A + +++ +G RYIEL
Sbjct: 746 SLEESHRAVVENNRKLMGNRYIELL 770
>gi|334312966|ref|XP_003339804.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 2-like [Monodelphis domestica]
Length = 1253
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 144/240 (60%), Gaps = 26/240 (10%)
Query: 366 GGVALC-LSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
GG C +A GRR GEA+VRF+D E RD++L+RHKHH+ RYIEV KA+GE+F+ +AGG
Sbjct: 806 GGRGPCAXNAQGRRTGEALVRFVDSEQRDLSLERHKHHMGARYIEVYKASGEEFLKIAGG 865
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
++E FL+R QVIIRMRGLP+ T V+ F G E C V G EG+LFV PDG
Sbjct: 866 TSHEVAQFLSREDQVIIRMRGLPFTATPGDVLAFL--GPE--CPVTGGPEGLLFVHYPDG 921
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTS 544
+ TGDAF LF EE A AL KHK +G RYIEL + + V QVLN+ M
Sbjct: 922 RPTGDAFALFACEELAQGALRKHKGILGKRYIELSGAPPSGVSQVLNRYM---------- 971
Query: 545 SNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTR-KDCIRLRGLPYEALCILMDIF-FVGQ 602
P++ L +P LP +G +DC+RLRGLPY A + DI F+G+
Sbjct: 972 -------SSPLIPTLPAPLIPVLPAPFPLAGAGVRDCVRLRGLPYTA--SIDDILGFLGE 1022
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL FLGE A +I GVHMV N QG+PSG+AFIQM S A +AAQ H + M
Sbjct: 1013 IDDILGFLGEAAGDIRPHGVHMVLNQQGRPSGDAFIQMKSADRALVAAQRCHKKMM---- 1068
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K+RY+EVF CSGE+M+LVL G
Sbjct: 1069 KERYVEVFPCSGEEMSLVLMG 1089
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + + FF+ N+ G G G+ TG+A V F
Sbjct: 777 ETVVRARGLPWQSSDQDIARFFKG-----LNIAKGGRGPCAXNA-QGRRTGEALVRFVDS 830
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D +L +HK +G RYIE+++++ E ++ T
Sbjct: 831 EQRDLSLERHKHHMGARYIEVYKASGEEFLKIAGGT 866
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A F +E AL++HK + KRYIE++ A V +
Sbjct: 921 GRPTGDAFALFACEELAQGALRKHKGILGKRYIELSGAPPSGVSQVLNRYMSSPLIPTLP 980
Query: 430 --------QAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
F GA V +R+RGLPY + ++ F E + ++ GV V
Sbjct: 981 APLIPVLPAPFPLAGAGVRDCVRLRGLPYTASIDDILGFL---GEAAGDIR--PHGVHMV 1035
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + + A A + HK+ + RY+E+F + E+ VL
Sbjct: 1036 LNQQGRPSGDAFIQMKSADRALVAAQRCHKKMMKERYVEVFPCSGEEMSLVL 1087
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
V F ATAG G LGSDE+E+ILL++ ++D + KV
Sbjct: 15 VLFGATAGALGAKLGSDERELILLVWQVVDLHSRKV 50
>gi|449284112|gb|EMC90693.1| Epithelial splicing regulatory protein 1 [Columba livia]
Length = 529
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 145/238 (60%), Gaps = 25/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 176 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 235
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ T ++V+ FF C V G+EGVLFV PD +
Sbjct: 236 SNEVAQFLSKENQVIVRMRGLPFNVTTEEVLAFF----GQHCPVTGGKEGVLFVTYPDSR 291
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G R + + S QVLN+ P T
Sbjct: 292 PTGDAFVLFACEEYAQNALKKHKDLLGKRRLSV-TSLVFCFAQVLNRYSSTPLIPLPTPP 350
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+ QQ ++P + +DCIRLRGLPY A + DI F+G+
Sbjct: 351 ILPVLPQQ------------FVPPTNV-----RDCIRLRGLPYAA--TIEDILEFLGE 389
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG+AFIQM S A+LAAQ H + M
Sbjct: 380 IEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSAERAFLAAQKCHKKTM---- 435
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP + +P + + LY
Sbjct: 436 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYSFPAPAAVVPTEAALY 495
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 496 -QPSVLLNP 503
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTK----------- 412
G GV R G+A V F +E+ ALK+HK + KR + VT
Sbjct: 278 GKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRRLSVTSLVFCFAQVLNR 337
Query: 413 --ANGEDFINVAGGNNNEAQAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNV 469
+ + Q F+ + IR+RGLPY T + +++F E S ++
Sbjct: 338 YSSTPLIPLPTPPILPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILEFL---GEFSTDI 394
Query: 470 MDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQ 528
GV V G+ +GDAF+ + E A A K HK+++ RY+E+F+ + E+
Sbjct: 395 RT--HGVHMVLNHQGRPSGDAFIQMKSAERAFLAAQKCHKKTMKDRYVEVFQCSAEEMNF 452
Query: 529 VL 530
VL
Sbjct: 453 VL 454
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 148 AVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 200
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 201 HRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGL 256
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 172 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GSRYIEVYKATGE 226
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 227 DFLKIAGGT 235
>gi|358252891|dbj|GAA50442.1| epithelial splicing regulatory protein 1/2 [Clonorchis sinensis]
Length = 846
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 148/241 (61%), Gaps = 12/241 (4%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG++L LS GRRNGEA++RF DQE RD+AL++HKHH+ +RY+EV A G +F+ AG
Sbjct: 437 GGISLVLSKIGRRNGEALIRFTDQEQRDLALRKHKHHMGQRYVEVYAAQGREFVAFAGAE 496
Query: 426 NNEAQAFL---TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
EA+ FL T Q +IRMRGLPY T +QV++FF + C V GEEGVLFV +
Sbjct: 497 TTEAEEFLKKFTSPYQALIRMRGLPYATTVQQVLEFF---SNTDCAVQFGEEGVLFVNRR 553
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
+G+ATGDAFV+FE + +KAL H + IG RYIELF+ST AEV QV+N + P +L
Sbjct: 554 NGRATGDAFVIFENQAIGEKALQNHWQHIGNRYIELFKSTPAEVNQVMNAVLNPPL--TL 611
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQ 602
S N ++ A + V LP + + + ++C G P A+ L + F Q
Sbjct: 612 PRSWNKITVDVKSALTAAALAVGVLPGVVGSPSSTENCS--TGDP--AIASLTQLNFTAQ 667
Query: 603 Q 603
Q
Sbjct: 668 Q 668
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVI-----IRMRGLPYECTAKQVIDF 458
D + I+V+ A+ FI+V + R ++V+ IR RGLP++ T + F
Sbjct: 376 DSKVIDVS-ADYSQFIDV------RPDELIRRKSEVVDDGHVIRARGLPWQATDLDIFHF 428
Query: 459 FEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
F + N+ +G G+ V G+ G+A + F +E+ D AL KHK +G RY+E+
Sbjct: 429 F-----SGLNISNG--GISLVLSKIGRRNGEALIRFTDQEQRDLALRKHKHHMGQRYVEV 481
Query: 519 FRSTTAE 525
+ + E
Sbjct: 482 YAAQGRE 488
>gi|449667958|ref|XP_002158900.2| PREDICTED: epithelial splicing regulatory protein 1-like [Hydra
magnipapillata]
Length = 503
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 142/235 (60%), Gaps = 29/235 (12%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG- 424
GGVALCL+ GRRNGEA+VRF EHRDMAL+RHKHH+ RYIEV K ++F+ +A G
Sbjct: 243 GGVALCLNVKGRRNGEALVRFESSEHRDMALRRHKHHLLGRYIEVYKGTAQEFLKIAKGP 302
Query: 425 --NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ A FLT G +VIIRMRGLP++ T V++FF +S V+ G+ GV+ + P
Sbjct: 303 AAAMHAAAEFLTNGGEVIIRMRGLPFDATVHDVVEFF----GDSPKVLQGKNGVMLISYP 358
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG +TGDAFVLFE E E AL KH+E+IG RY+ELFRST AE+QQV L
Sbjct: 359 DGASTGDAFVLFETEAEGQFALKKHRENIGKRYVELFRSTRAELQQV------------L 406
Query: 543 TSSNNGLSAQQPMLSHLAQVPVP-------YLPQHIITSGTRKDCIRLRGLPYEA 590
T N G P+ Q+P P L + + C+R+RGLP+ A
Sbjct: 407 TMYNIGYQLVTPV---PGQLPFPGSGLNDRALINQRLQALMNMSCLRMRGLPFSA 458
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + V FF N+ G GV G+ G+A V FE E
Sbjct: 216 IVRARGLPWQVSDVDVAAFF-----TGLNIAKG--GVALCLNVKGRRNGEALVRFESSEH 268
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
D AL +HK + RYIE+++ T E ++
Sbjct: 269 RDMALRRHKHHLLGRYIEVYKGTAQEFLKI 298
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 24/126 (19%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV L G G+A V F + ALK+H+ +I KRY+E+ ++ + V
Sbjct: 348 GKNGVMLISYPDGASTGDAFVLFETEAEGQFALKKHRENIGKRYVELFRSTRAELQQVLT 407
Query: 424 -------------------GNNNEAQAFLTRGAQVI-----IRMRGLPYECTAKQVIDFF 459
G+ +A + + Q + +RMRGLP+ + K +++F
Sbjct: 408 MYNIGYQLVTPVPGQLPFPGSGLNDRALINQRLQALMNMSCLRMRGLPFSASHKDILNFL 467
Query: 460 EAGTEN 465
EN
Sbjct: 468 GNYKEN 473
>gi|308464398|ref|XP_003094466.1| CRE-TWK-4 protein [Caenorhabditis remanei]
gi|308247695|gb|EFO91647.1| CRE-TWK-4 protein [Caenorhabditis remanei]
Length = 1026
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 144/225 (64%), Gaps = 33/225 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ALCLS+ GRRNGE +V+F QE RD+ALKRH++ + RYIEV KA ++F++VA G+
Sbjct: 611 GGIALCLSSEGRRNGEVLVQFATQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGS 670
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA F++ A VI+RMRGLPY+CT Q+ FFE + + +LF+ + DG+
Sbjct: 671 SIEAMEFVSANA-VIVRMRGLPYDCTDTQIRAFFEP--------LKLTDKILFITRTDGR 721
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFV FE EE+A K L KH++ IG RYIELF+ST AEVQQV+ + N + SS
Sbjct: 722 PTGDAFVQFETEEDAQKGLLKHRQIIGQRYIELFKSTAAEVQQVVKRC------NLINSS 775
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P +++ + P +KDC+RLRGLPYEA
Sbjct: 776 --------PAVTNAVEAP----------EEKKKDCVRLRGLPYEA 802
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HI+ FLG+FA + +QGVHMVYN+QG PSGEAFIQ+ SE +A A HN M GK
Sbjct: 804 VQHIVTFLGDFAQMVKFQGVHMVYNNQGNPSGEAFIQLISEAAAAATAAGVHNNFMCVGK 863
Query: 122 KQRYIEVFQCSGEDMNL 138
K+RYIEVFQ S E++NL
Sbjct: 864 KKRYIEVFQSSAEELNL 880
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED---------FINVAGGNN 426
GR G+A V+F +E L +H+ I +RYIE+ K+ + IN +
Sbjct: 720 GRPTGDAFVQFETEEDAQKGLLKHRQIIGQRYIELFKSTAAEVQQVVKRCNLINSSPAVT 779
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
N +A + + R+RGLPYE T + ++ F + M +GV V G
Sbjct: 780 NAVEAPEEKKKDCV-RLRGLPYEATVQHIVTFLGDFAQ-----MVKFQGVHMVYNNQGNP 833
Query: 487 TGDAFV-LFEKEEEADKALSKHKESIGI----RYIELFRSTTAEV 526
+G+AF+ L + A A H + + RYIE+F+S+ E+
Sbjct: 834 SGEAFIQLISEAAAAATAAGVHNNFMCVGKKKRYIEVFQSSAEEL 878
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G V+ R RGLP++ + + V FF AG +++ G G+ +G+ G+ V F
Sbjct: 580 GDNVVCRARGLPWQASDQHVAQFF-AG----LDIVPG--GIALCLSSEGRRNGEVLVQFA 632
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN----KTMELPKNNSLTSSNNGL 549
+E D AL +H+ + RYIE++++ E V + ME N++ GL
Sbjct: 633 TQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGSSIEAMEFVSANAVIVRMRGL 690
>gi|341896441|gb|EGT52376.1| hypothetical protein CAEBREN_32196, partial [Caenorhabditis
brenneri]
Length = 616
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 151/241 (62%), Gaps = 34/241 (14%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ALCLS+ GRRNGE +V+F QE RD+ALKRH++ + RYIEV KA ++F++VA G++
Sbjct: 212 GIALCLSSEGRRNGEVLVQFASQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGSS 271
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
EA F++ A VI+RMRGLPY+C+ Q+ FFE + E +LF+ + DG+
Sbjct: 272 TEAMEFVSANA-VIVRMRGLPYDCSDNQIRAFFEP--------LKLTEKILFITRTDGRP 322
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSN 546
TGDAFV FE EE+A K L KH+ IG RYIELF+ST AEVQQV+ K +L +SN
Sbjct: 323 TGDAFVQFETEEDAQKGLLKHRHIIGQRYIELFKSTAAEVQQVV-------KRCNLINSN 375
Query: 547 NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQDSF 606
P +++ + P +KDC+RLRGLPYEA + + F+G+ S
Sbjct: 376 -------PAVANAIETP----------DEKKKDCVRLRGLPYEA-TVQHIVTFLGEYSSM 417
Query: 607 V 607
V
Sbjct: 418 V 418
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HI+ FLGE++S + +QGVHMVYN+QG PSGEAFIQM SE +A A HN M GK
Sbjct: 404 VQHIVTFLGEYSSMVKFQGVHMVYNNQGHPSGEAFIQMISEQAAAATAAGVHNNFMCVGK 463
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPP 146
K+RYIEVFQ + E++NL G PP
Sbjct: 464 KKRYIEVFQSTAEELNLPRAGPQPP 488
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF------INVAGGNNNEA 429
GR G+A V+F +E L +H+H I +RYIE+ K+ + N+ N A
Sbjct: 320 GRPTGDAFVQFETEEDAQKGLLKHRHIIGQRYIELFKSTAAEVQQVVKRCNLINSNPAVA 379
Query: 430 QAFLT--RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
A T + +R+RGLPYE T + ++ F G +S M +GV V G +
Sbjct: 380 NAIETPDEKKKDCVRLRGLPYEATVQHIVTFL--GEYSS---MVKFQGVHMVYNNQGHPS 434
Query: 488 GDAFV-LFEKEEEADKALSKHKESIGI----RYIELFRSTTAEV 526
G+AF+ + ++ A A H + + RYIE+F+ST E+
Sbjct: 435 GEAFIQMISEQAAAATAAGVHNNFMCVGKKKRYIEVFQSTAEEL 478
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G V+ R RGLP++ + + V FF C G+ +G+ G+ V F
Sbjct: 180 GDNVVCRARGLPWQASDQHVAQFFAGLDIVPC-------GIALCLSSEGRRNGEVLVQFA 232
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL----NKTMELPKNNSLTSSNNGL 549
+E D AL +H+ + RYIE++++ E V + ME N++ GL
Sbjct: 233 SQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGSSTEAMEFVSANAVIVRMRGL 290
>gi|71998567|ref|NP_495960.2| Protein SYM-2 [Caenorhabditis elegans]
gi|74966269|sp|Q22708.3|SYM2_CAEEL RecName: Full=RNA-binding protein sym-2; AltName: Full=Synthetic
lethal with mec-8 protein 2
gi|29165341|gb|AAO65265.1| putative RNA binding protein SYM-2 [Caenorhabditis elegans]
gi|33300449|emb|CAA93887.2| Protein SYM-2 [Caenorhabditis elegans]
Length = 618
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 144/225 (64%), Gaps = 33/225 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ALCLS+ GRRNGE +V+F QE RD+ALKRH++ + RYIEV KA ++F++VA G+
Sbjct: 209 GGIALCLSSEGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGS 268
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA F++ A +I+RMRGLPY+CT Q+ FFE + + +LF+ + DG+
Sbjct: 269 STEAMEFVSANA-IIVRMRGLPYDCTDAQIRTFFEP--------LKLTDKILFITRTDGR 319
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFV FE EE+A + L KH++ IG RYIELF+ST AEVQQV+ + N + SS
Sbjct: 320 PTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRC------NLINSS 373
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P +++ + P +KDC+RLRGLPYEA
Sbjct: 374 --------PAVANAVEAP----------EEKKKDCVRLRGLPYEA 400
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ V+HI+ FLG+FA+ + +QGVHMVYN+QG PSGEAFIQM +E +A A HN M
Sbjct: 399 EATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVHNNFMS 458
Query: 119 FGKKQRYIEVFQCSGEDMNL 138
GKK+RYIEVFQ S E++NL
Sbjct: 459 VGKKKRYIEVFQASAEELNL 478
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED---------FINVAGGNN 426
GR G+A V+F +E L +H+ I +RYIE+ K+ + IN +
Sbjct: 318 GRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSSPAVA 377
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
N +A + + R+RGLPYE T + ++ F M +GV V G
Sbjct: 378 NAVEAPEEKKKDCV-RLRGLPYEATVQHIVTFL-----GDFATMVKFQGVHMVYNNQGHP 431
Query: 487 TGDAFVLFEKEEEADK-ALSKHKESIGI----RYIELFRSTTAEV 526
+G+AF+ E+ A A H + + RYIE+F+++ E+
Sbjct: 432 SGEAFIQMINEQAASACAAGVHNNFMSVGKKKRYIEVFQASAEEL 476
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
E Q G V+ R RGLP++ + V FF AG +++ G G+ +G+
Sbjct: 170 EDQEVGADGDNVVCRARGLPWQASDHHVAQFF-AG----LDIVPG--GIALCLSSEGRRN 222
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL----NKTMELPKNNSLT 543
G+ V F +E D AL +H+ + RYIE++++ E V + ME N++
Sbjct: 223 GEVLVQFSSQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGSSTEAMEFVSANAII 282
Query: 544 SSNNGL 549
GL
Sbjct: 283 VRMRGL 288
>gi|339253438|ref|XP_003371942.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316967723|gb|EFV52113.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 505
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 122/175 (69%), Gaps = 7/175 (4%)
Query: 421 VAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
V GN+NEAQ FL+R IIRMRGLPY+CTAK++++FFE+G EN V GE G++FV
Sbjct: 32 VVAGNSNEAQQFLSRECVAIIRMRGLPYDCTAKRIMEFFESG-ENGVKVAGGESGIMFVN 90
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNN 540
K DG+ATGDAFVL EE+A KALSKHKE IG RYIELFRST+AEVQQV+NK++E+ K +
Sbjct: 91 KADGRATGDAFVLIASEEDAQKALSKHKEVIGSRYIELFRSTSAEVQQVINKSLEVAKID 150
Query: 541 SLTSSNNGLSAQQPMLSHLAQVPV-----PYLPQHIITSGTRKDCIRLRGLPYEA 590
T GL P + PV P LP +G RKDC+RLRGLPYEA
Sbjct: 151 LNTMPTVGLLGSLPPRGAIP-TPVPGQIQPILPPQAFITGCRKDCVRLRGLPYEA 204
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 70/88 (79%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HILEFLGEF+ +IV QGVHMVYN+QG PSGEAFIQMDS+ +A A RHN+ M GK
Sbjct: 206 VQHILEFLGEFSKHIVLQGVHMVYNAQGNPSGEAFIQMDSDIAAATTAADRHNKYMHTGK 265
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
KQRYIEVFQCS +DMNLVL G P SP
Sbjct: 266 KQRYIEVFQCSADDMNLVLAGPAPVPSP 293
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 52/225 (23%)
Query: 358 GYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKAN 414
G + G G+ A GR G+A V +E AL +HK I RYIE+ T A
Sbjct: 76 GVKVAGGESGIMFVNKADGRATGDAFVLIASEEDAQKALSKHKEVIGSRYIELFRSTSAE 135
Query: 415 GEDFIN----VAGGNNNEA-----------------------------QAFLTRGAQVII 441
+ IN VA + N QAF+T + +
Sbjct: 136 VQQVINKSLEVAKIDLNTMPTVGLLGSLPPRGAIPTPVPGQIQPILPPQAFITGCRKDCV 195
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE---- 497
R+RGLPYE + +++F E S +++ +GV V G +G+AF+ + +
Sbjct: 196 RLRGLPYEAEVQHILEFL---GEFSKHIV--LQGVHMVYNAQGNPSGEAFIQMDSDIAAA 250
Query: 498 ----EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
+ +K + K+ RYIE+F+ + ++ VL +P
Sbjct: 251 TTAADRHNKYMHTGKKQ---RYIEVFQCSADDMNLVLAGPAPVPS 292
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ +RGLP+ T V+ FF+ E + + + + P+G+ G+A +LF+ EA
Sbjct: 428 VLLRGLPFNVTPTDVLSFFQGFPEITMDCIH------LQRAPNGQLNGEAIILFQSRMEA 481
Query: 501 DKALSK-HKESIGIRYIELF 519
++A+ + ++ G R IE+F
Sbjct: 482 ERAVIECSRQLFGNRPIEMF 501
>gi|242017923|ref|XP_002429433.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514365|gb|EEB16695.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 498
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 119/164 (72%), Gaps = 8/164 (4%)
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
NEAQ FL + +IIRMRGLPYEC++KQVIDFF G E SC++ DGE G+LFVKKPDG++
Sbjct: 29 NEAQQFLNKRG-IIIRMRGLPYECSSKQVIDFFREG-EQSCDIFDGENGILFVKKPDGRS 86
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSN 546
TGDAFV F E EA ALSKHKE IG RYIELFRST AEV+QV + + + S
Sbjct: 87 TGDAFVQFIHESEAIAALSKHKELIGTRYIELFRSTPAEVEQVSRNDIYI---KAQESKP 143
Query: 547 NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ Q P+ +A +P +PQH+ITSGT+KDCIRLRGLPYEA
Sbjct: 144 RVPAVQLPL---VAPIPPAAVPQHVITSGTKKDCIRLRGLPYEA 184
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 76/102 (74%), Gaps = 6/102 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHIL+FLG+ A+NIV QGVHMVYN GQPSGEAFIQMDSE SA AA H+R M FGK
Sbjct: 186 VEHILDFLGDNANNIVLQGVHMVYNVHGQPSGEAFIQMDSEVSASQAANHCHHRYMNFGK 245
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGM 163
KQRY+EVFQCSG+DMN L TS +SP +++PG+
Sbjct: 246 KQRYVEVFQCSGDDMNAFL------TSGHVSPKATPVINPGI 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 43/243 (17%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V+FI + AL +HK I RYIE+ ++ + V+
Sbjct: 72 GENGILFVKKPDGRSTGDAFVQFIHESEAIAALSKHKELIGTRYIELFRSTPAEVEQVSR 131
Query: 424 GN----NNEA---------------------QAFLTRGAQV-IIRMRGLPYECTAKQVID 457
+ E+ Q +T G + IR+RGLPYE + ++D
Sbjct: 132 NDIYIKAQESKPRVPAVQLPLVAPIPPAAVPQHVITSGTKKDCIRLRGLPYEAQVEHILD 191
Query: 458 FFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGI--- 513
F +N+ N++ +GV V G+ +G+AF+ + E A +A + H +
Sbjct: 192 FL---GDNANNIV--LQGVHMVYNVHGQPSGEAFIQMDSEVSASQAANHCHHRYMNFGKK 246
Query: 514 -RYIELFRSTTAEVQQVLNKTMELPKNNSLTS---SNN----GLSAQQPMLSHLAQVPVP 565
RY+E+F+ + ++ L PK + + NN G+ +LS+ PV
Sbjct: 247 QRYVEVFQCSGDDMNAFLTSGHVSPKATPVINPGIENNIPGMGVPLSSTLLSYYEPSPVS 306
Query: 566 YLP 568
+P
Sbjct: 307 LMP 309
>gi|156401541|ref|XP_001639349.1| predicted protein [Nematostella vectensis]
gi|156226477|gb|EDO47286.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 139/230 (60%), Gaps = 16/230 (6%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+A CL+ GRRNGEA +RF + +HRD+AL+RHK H+ RYIEV KA+ +DF+ + G
Sbjct: 39 GGIAFCLNMQGRRNGEAFIRFENGDHRDLALRRHKMHLGTRYIEVYKASAQDFLRIVRGM 98
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ A F++ A+VIIRMRGLP+ A V+ FF + V GE G+L V+ +GK
Sbjct: 99 SIAAN-FVSTNAEVIIRMRGLPFSTKAADVVRFFG----DDVPVYRGEGGILMVRGRNGK 153
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK----TMELPKNNS 541
ATGDAFVLFE EE AL KH+E +G RY+ELFRS+ +EVQQVL+ M +P
Sbjct: 154 ATGDAFVLFETEEHGRAALKKHREVLGSRYVELFRSSQSEVQQVLSSLSLFMMGVPP--- 210
Query: 542 LTSSNNGLSAQQPML-SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
L N L P PVPY KDC+RLRGLP+ A
Sbjct: 211 LAMLPNPLPQHPPFHPPMFLPGPVPYAAN---GGSNAKDCLRLRGLPFSA 257
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+ +L+FL E A+ + GVHMVYN+QG+PSG+A++Q+ S A AA H +M
Sbjct: 259 VQDVLDFLKEHAAYVAPGGVHMVYNTQGRPSGDAYVQLLSPDFAAAAANELHKHHM---- 314
Query: 122 KQRYIEVFQCSGEDMNLVL 140
+RYIEVF CS D++ V+
Sbjct: 315 GERYIEVFPCSNSDISAVI 333
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 58/221 (26%)
Query: 354 NTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA 413
+ +P Y G GG+ + G+ G+A V F +EH ALK+H+ + RY+E+ ++
Sbjct: 133 DDVPVYR---GEGGILMVRGRNGKATGDAFVLFETEEHGRAALKKHREVLGSRYVELFRS 189
Query: 414 NGEDFINV----------------------------------------AGGNNNEAQAFL 433
+ + V A G +N
Sbjct: 190 SQSEVQQVLSSLSLFMMGVPPLAMLPNPLPQHPPFHPPMFLPGPVPYAANGGSN------ 243
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV- 492
A+ +R+RGLP+ T + V+DF + E++ V G GV V G+ +GDA+V
Sbjct: 244 ---AKDCLRLRGLPFSATVQDVLDFLK---EHAAYVAPG--GVHMVYNTQGRPSGDAYVQ 295
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
L + A A HK +G RYIE+F + +++ V+ +
Sbjct: 296 LLSPDFAAAAANELHKHHMGERYIEVFPCSNSDISAVIASS 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++R RGLP++ + + V +FF N+ G G+ F G+ G+AF+ FE
Sbjct: 10 DTVLRARGLPWQASDQDVANFFRG-----LNIPRG--GIAFCLNMQGRRNGEAFIRFENG 62
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKN 539
+ D AL +HK +G RYIE+++++ + +++ + M + N
Sbjct: 63 DHRDLALRRHKMHLGTRYIEVYKASAQDFLRIV-RGMSIAAN 103
>gi|256087258|ref|XP_002579790.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350644185|emb|CCD61054.1| heterogeneous nuclear ribonucleoprotein-related [Schistosoma
mansoni]
Length = 1009
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 128/201 (63%), Gaps = 21/201 (10%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GG++L LS GRRNGEA+++F D E + +AL++HKHH+ KRYIEV A G DFI++A
Sbjct: 399 IAKGGISLVLSKIGRRNGEALIQFADAEQQSLALRKHKHHVGKRYIEVYAATGSDFISIA 458
Query: 423 GGNNNEAQAF---LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD----GEEG 475
GG + EA F LT Q +IRMRGLPY T +Q++ F C ++ G
Sbjct: 459 GGESQEAMNFLGKLTTPNQTLIRMRGLPYTTTPEQIVRFL-------CILIKIVQFNANG 511
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+LFV KPDG+ATGDAFV+FE + A+KAL +K+ IG RYIELF+ST AEV QV+N +
Sbjct: 512 ILFVNKPDGRATGDAFVIFETKIVAEKALENNKQHIGSRYIELFKSTPAEVNQVMNSILS 571
Query: 536 LP-------KNNSLTSSNNGL 549
NN LT NN +
Sbjct: 572 STCEEQIHCWNNHLTECNNSV 592
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 44/172 (25%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T V++R RGLP++ T ++ FF N+ G G+ V G+ G+A +
Sbjct: 369 TINDNVVVRARGLPWQATDLEIFQFFSG-----INIAKG--GISLVLSKIGRRNGEALIQ 421
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQ 553
F E+ AL KHK +G RYIE++ +T ++ + G +Q+
Sbjct: 422 FADAEQQSLALRKHKHHVGKRYIEVYAATGSDFISIA-----------------GGESQE 464
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA--------LCILMDI 597
M + L ++ P + IR+RGLPY LCIL+ I
Sbjct: 465 AM-NFLGKLTTP-----------NQTLIRMRGLPYTTTPEQIVRFLCILIKI 504
>gi|432118737|gb|ELK38193.1| Epithelial splicing regulatory protein 1 [Myotis davidii]
Length = 596
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 107/144 (74%), Gaps = 4/144 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 221 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 280
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF C + G+EG+LFV PDG+
Sbjct: 281 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF----GQHCPITGGKEGILFVTYPDGR 336
Query: 486 ATGDAFVLFEKEEEADKALSKHKE 509
TGDAFVLF EE A AL KHK+
Sbjct: 337 PTGDAFVLFACEEYAQNALRKHKD 360
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S AYLAAQ H + M
Sbjct: 389 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAYLAAQKCHKKTM---- 444
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 445 KDRYVEVFQCSAEEMNFVLMG 465
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 60/215 (27%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 193 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 245
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL---- 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 246 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 305
Query: 550 SAQQPMLSHLAQVPVP-----------------------------------------YLP 568
+A + + P+ LP
Sbjct: 306 TADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLVLP 365
Query: 569 QHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
Q + +DCIRLRGLPY A + DI F+G+
Sbjct: 366 QQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 398
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR G+A V F +E+ AL++HK + V N D
Sbjct: 335 GRPTGDAFVLFACEEYAQNALRKHKDLLVLPQQFVPPTNVRD------------------ 376
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
IR+RGLPY T + ++DF E S ++ GV V G+ +GDAF+ +
Sbjct: 377 ----CIRLRGLPYAATIEDILDFL---GEFSTDIR--THGVHMVLNHQGRPSGDAFIQMK 427
Query: 496 KEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
+ A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 428 SADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 463
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 217 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 271
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 272 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 305
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID 38
P Y V F TAG G LGSDE+E+ILL++ ++D
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVD 39
>gi|313227785|emb|CBY22933.1| unnamed protein product [Oikopleura dioica]
Length = 559
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 145/244 (59%), Gaps = 27/244 (11%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGV+L L+ GRR+GEA++RF + EHR++AL+RH+ H+ RYIEV KA DFI + G
Sbjct: 161 GGVSLVLNQNGRRSGEALIRFENSEHRNLALQRHRQHMGNRYIEVFKAPSIDFIQMNAGT 220
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ + FL +G+ I RMRGLP+ + + ++ F ++++G +G+ +K +GK
Sbjct: 221 LPQVERFLGQGSVAIARMRGLPFSASKEDILQFL-----CEIHIVNGRDGIFLIKTAEGK 275
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVL E++A +AL +HK ++ RY+E+FRST AE+ QVL + M
Sbjct: 276 PTGDAFVLLASEDDAVQALGRHKANLRDRYVEVFRSTGAELHQVLTRAMA---------- 325
Query: 546 NNGLSAQQPMLSHLAQVPVPY-LPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQ 603
P++ + +P+ + Q I S R +C+RLRG+PY A L DI F+G+
Sbjct: 326 -------APIIPPGSHTGLPFMMAQQYIPSSVR-NCVRLRGMPYSA--TLEDIMNFLGES 375
Query: 604 DSFV 607
F+
Sbjct: 376 SQFI 379
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E I+ FLGE + I+ GVHMV N QG+PSG+AFIQ+ + A A L N+ K
Sbjct: 365 LEDIMNFLGESSQFILPAGVHMVLNQQGRPSGDAFIQLQAHEFASRVA-LDVNKGGCHKK 423
Query: 122 K--QRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLL 159
+RY+EVFQCSG++MNLVL G + +P G TL+
Sbjct: 424 HMGERYVEVFQCSGDEMNLVLMGGTLNRNGVQAPPGMTLI 463
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 37/255 (14%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
V G G+ L +A G+ G+A V ++ AL RHK ++ RY+EV ++ G + V
Sbjct: 260 VNGRDGIFLIKTAEGKPTGDAFVLLASEDDAVQALGRHKANLRDRYVEVFRSTGAELHQV 319
Query: 422 ---------------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G AQ ++ + +R+RG+PY T + +++F E+S
Sbjct: 320 LTRAMAAPIIPPGSHTGLPFMMAQQYIPSSVRNCVRLRGMPYSATLEDIMNFL---GESS 376
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKAL------SKHKESIGIRYIELFR 520
++ GV V G+ +GDAF+ + E A + HK+ +G RY+E+F+
Sbjct: 377 QFILPA--GVHMVLNQQGRPSGDAFIQLQAHEFASRVALDVNKGGCHKKHMGERYVEVFQ 434
Query: 521 STTAEVQQVL------NKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITS 574
+ E+ VL ++ P +L ++ + QQ ML A + +P P + +
Sbjct: 435 CSGDEMNLVLMGGTLNRNGVQAPPGMTLIPTDFAMQ-QQAMLYAHAPMMMPVAPNAFMQT 493
Query: 575 GTRKDCIRLRGL-PY 588
D R R + PY
Sbjct: 494 A---DVARQRAVFPY 505
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+R+RG+P++C+ + FF N+ G GV V +G+ +G+A + FE E
Sbjct: 133 TCVRVRGIPWQCSDHDLAKFFRG-----LNIPSG--GVSLVLNQNGRRSGEALIRFENSE 185
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM 534
+ AL +H++ +G RYIE+F++ + + Q+ T+
Sbjct: 186 HRNLALQRHRQHMGNRYIEVFKAPSIDFIQMNAGTL 221
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E IL+FL E G+ ++ ++G+P+G+AF+ + SE A + A RH N+ +
Sbjct: 248 EDILQFLCEIHIVNGRDGIFLIKTAEGKPTGDAFVLLASEDDA-VQALGRHKANL----R 302
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLL 159
RY+EVF+ +G +++ VL + +P I P T L
Sbjct: 303 DRYVEVFRSTGAELHQVLTRAM--AAPIIPPGSHTGL 337
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV +V N G+ SGEA I+ ++ LA Q RH ++M RYIEVF+
Sbjct: 157 NIPSGGVSLVLNQNGRRSGEALIRFENSEHRNLALQ-RHRQHM----GNRYIEVFKAPSI 211
Query: 135 DMNLVLNGVLP 145
D + G LP
Sbjct: 212 DFIQMNAGTLP 222
>gi|431912397|gb|ELK14531.1| Epithelial splicing regulatory protein 2 [Pteropus alecto]
Length = 698
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 4/143 (2%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 299 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 358
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 359 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 414
Query: 486 ATGDAFVLFEKEEEADKALSKHK 508
TGDAF LF EE A AL +HK
Sbjct: 415 PTGDAFALFACEELAQAALRRHK 437
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 459 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERAIAAAQRCHKKVM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 515 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 574
Query: 171 LYP 173
LYP
Sbjct: 575 LYP 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 52/209 (24%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 269 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 321
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEV------------------QQVLNKTMELPK 538
E+ D AL +HK +G+RYIE++++T E QV+ + LP
Sbjct: 322 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGTSLEVARFLSREDQVILRLRGLPF 381
Query: 539 NNS-------------LTSSNNGL-----SAQQPMLSHLAQVPVPYLPQHIIT------S 574
+ +T +GL +P A L Q + +
Sbjct: 382 SAGPADVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLA 441
Query: 575 GTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
GT +DC+RLRGLPY A + DI F+G+
Sbjct: 442 GTGRDCVRLRGLPYTA--TIEDILSFLGE 468
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR G+A F +E AL+RHK + G D
Sbjct: 413 GRPTGDAFALFACEELAQAALRRHKGML--------AGTGRD------------------ 446
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
+R+RGLPY T + ++ F E + ++ GV V G+ +GDAF+
Sbjct: 447 ----CVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQQGRPSGDAFIQMT 497
Query: 496 KEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 498 SAERAIAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 533
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 295 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 349
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 350 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 385
>gi|351714130|gb|EHB17049.1| Epithelial splicing regulatory protein 2 [Heterocephalus glaber]
Length = 719
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 103/146 (70%), Gaps = 4/146 (2%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCL+A GRRNGEA++RF D+E RD+AL+RHKHH+ RYIEV KA GE+F+ +A
Sbjct: 317 IARGGVALCLNAQGRRNGEALIRFTDREQRDLALQRHKHHMGVRYIEVYKATGEEFVKIA 376
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ P
Sbjct: 377 GGTSLEVARFLSREDQVILRLRGLPFSAGPADVLSFL--GPE--CPVTGGADGLLFVRHP 432
Query: 483 DGKATGDAFVLFEKEEEADKALSKHK 508
DG+ TGDAF LF EE A AL +HK
Sbjct: 433 DGRPTGDAFALFACEELAQAALRRHK 458
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 480 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKMM---- 535
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS EDM+ VL +G+ PP P +SP +P ++P +
Sbjct: 536 KERYVEVVSCSTEDMSRVLMGGTLSRSGMSPPPCKLPCLSPPTYATFQATPTLIPTETAA 595
Query: 171 LYP 173
LYP
Sbjct: 596 LYP 598
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 52/209 (24%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 290 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFTD 342
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEV------------------QQVLNKTMELPK 538
E+ D AL +HK +G+RYIE++++T E QV+ + LP
Sbjct: 343 REQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGTSLEVARFLSREDQVILRLRGLPF 402
Query: 539 NNS-------------LTSSNNGL-----SAQQPMLSHLAQVPVPYLPQHIIT------S 574
+ +T +GL +P A L Q + +
Sbjct: 403 SAGPADVLSFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLA 462
Query: 575 GTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
GT +DC+RLRGLPY A + DI F+G+
Sbjct: 463 GTGRDCVRLRGLPYTA--TIEDILSFLGE 489
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR G+A F +E AL+RHK + G D
Sbjct: 434 GRPTGDAFALFACEELAQAALRRHKGML--------AGTGRD------------------ 467
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
+R+RGLPY T + ++ F E + ++ GV V G+ +GDAF+
Sbjct: 468 ----CVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQQGRPSGDAFIQMT 518
Query: 496 KEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
E A A + HK+ + RY+E+ +T ++ +VL
Sbjct: 519 SAERALAAAQRCHKKMMKERYVEVVSCSTEDMSRVL 554
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 316 NIARGGVALCLNAQGRRNGEALIRFTDREQRDLALQ-RHKHHM----GVRYIEVYKATGE 370
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 371 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 406
>gi|195583688|ref|XP_002081648.1| GD25607 [Drosophila simulans]
gi|194193657|gb|EDX07233.1| GD25607 [Drosophila simulans]
Length = 628
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 87/98 (88%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTLGS 404
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 40/163 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 377
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F +G
Sbjct: 378 AQV-----------------IIRMRGLPYDATAKQVLDFFTLG 403
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGAGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
>gi|324497877|gb|ADY39587.1| putative fusili isoform B [Hottentotta judaicus]
Length = 112
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VEHILEFLGE+A NIV+QGVHMVYN+QGQPSGE FIQMDSEHSAY+AAQ RH+R M+FGK
Sbjct: 28 VEHILEFLGEYAKNIVFQGVHMVYNAQGQPSGETFIQMDSEHSAYIAAQQRHHRYMVFGK 87
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLP 145
KQRYIEVFQCS +DMNLVL G +P
Sbjct: 88 KQRYIEVFQCSVDDMNLVLTGGIP 111
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 565 PYLPQHIITSGTRKDCIRLRGLPYEA 590
P L Q ++ SG+R+DCIRLRGLPYEA
Sbjct: 1 PLLSQQLLPSGSRRDCIRLRGLPYEA 26
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLPYE + +++F E + N++ +GV V G+ +G+ F+ + E A
Sbjct: 17 IRLRGLPYEAQVEHILEFL---GEYAKNIVF--QGVHMVYNAQGQPSGETFIQMDSEHSA 71
Query: 501 DKALSKHKESIGI-----RYIELFRSTTAEVQQVLN 531
A + + RYIE+F+ + ++ VL
Sbjct: 72 YIAAQQRHHRYMVFGKKQRYIEVFQCSVDDMNLVLT 107
>gi|341902820|gb|EGT58755.1| CBN-SYM-2 protein [Caenorhabditis brenneri]
Length = 761
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 139/296 (46%), Gaps = 95/296 (32%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQE--------HRDMALKR------------------H 399
GG+ALCLS+ GRRNGE +V+F QE HR+ L R H
Sbjct: 235 GGIALCLSSEGRRNGEVLVQFASQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGH 294
Query: 400 KHHIDK---RYIEVTKANGEDFINVA-------------------------GGNNNEAQA 431
HI R+ ++ + V+ G++ EA
Sbjct: 295 PEHIRSFLPRFWLISPPSAPSIPGVSRSPCRFLTNFSLFLSFPAFPNPYFFSGSSTEAME 354
Query: 432 FLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
F++ A VI+RMRGLPY+C+ Q+ FFE + E +LF+ + DG+ TGDAF
Sbjct: 355 FVSANA-VIVRMRGLPYDCSDNQIRAFFEP--------LKLTEKILFITRTDGRPTGDAF 405
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
V FE EE+A K L KH+ IG RYIELF+ST AEVQQV+ K +L +SN
Sbjct: 406 VQFETEEDAQKGLLKHRHIIGQRYIELFKSTAAEVQQVV-------KRCNLINSN----- 453
Query: 552 QQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALC--------ILMDIFF 599
P +++ + P +KDC+RLRGLPYEA +L IFF
Sbjct: 454 --PAVANAIETP----------DEKKKDCVRLRGLPYEATVSRVSGGWGVLRWIFF 497
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HI+ FLGE++S + +QGVHMVYN+QG PSGEAFIQM SE +A A HN M GK
Sbjct: 550 VQHIVTFLGEYSSMVKFQGVHMVYNNQGHPSGEAFIQMISEQAAAATAAGVHNNFMCVGK 609
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPP 146
K+RYIEVFQ + E++NL G PP
Sbjct: 610 KKRYIEVFQSTAEELNLPRAGPQPP 634
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G V+ R RGLP++ + + V FF AG +++ G G+ +G+ G+ V F
Sbjct: 204 GDNVVCRARGLPWQASDQHVAQFF-AG----LDIVPG--GIALCLSSEGRRNGEVLVQFA 256
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+E D AL +H+ + RYIE++++ E V
Sbjct: 257 SQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHV 290
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 21/109 (19%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+H+ +F +IV G+ + +S+G+ +GE +Q S+ S LA L+ +RN +
Sbjct: 221 QHVAQFFA--GLDIVPGGIALCLSSEGRRNGEVLVQFASQESRDLA--LKRHRNFLLS-- 274
Query: 123 QRYIEVFQCSGEDMNLVLNG--------------VLPPTSPAISPVGKT 157
RYIEV++ ++ V G + PP++P+I V ++
Sbjct: 275 -RYIEVYKAGLDEFMHVATGHPEHIRSFLPRFWLISPPSAPSIPGVSRS 322
>gi|15292439|gb|AAK93488.1| LP10580p [Drosophila melanogaster]
Length = 292
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 74/93 (79%), Gaps = 2/93 (2%)
Query: 61 LVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
+VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+FG
Sbjct: 1 MVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMMFG 60
Query: 121 KKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
KK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 61 KKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 91
>gi|340386110|ref|XP_003391551.1| PREDICTED: epithelial splicing regulatory protein 1-like, partial
[Amphimedon queenslandica]
Length = 541
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 26/240 (10%)
Query: 353 LNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTK 412
LN IPG GV ++ GRR GEAIV ++ AL+R +H++ +RY+EV +
Sbjct: 195 LNIIPG--------GVVFSINPVGRRTGEAIVVLEGEDQAQFALQRDRHYLHQRYVEVYE 246
Query: 413 ANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF--EAGTENSCNVM 470
A+ ++F + + F +RM+GLPY T +++FF EA N
Sbjct: 247 ASPDNFFQFCDTTGSSEKVF-------TVRMQGLPYRATESDIMEFFQPEAPVSNEA--- 296
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+G+L V+ PDGKA+GDAF +F E ++AL KH+ ++ RYIE+F S+ E VL
Sbjct: 297 ---DGILIVRYPDGKASGDAFAVFSSEAHVEEALKKHRNNLMGRYIEVFHSSLKEFLVVL 353
Query: 531 NKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
NK+ + + N + G+ K+C++LRGLP+EA
Sbjct: 354 NKSGTPEQLDRFAYLN---TESGGGGGGGRGGGGGSGGGASKRGGSEKNCVKLRGLPWEA 410
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E ++ F G+ +I QG+HMV N+Q +P+G+ F+QM S +A AA H +N+
Sbjct: 413 EDVISFFGDLNRSIEQQGIHMVLNAQSRPTGDCFVQMTSVDAATRAANELHRQNI----G 468
Query: 123 QRYIEVFQCSGEDMNLVL 140
+RYIEVFQ SG D+ L
Sbjct: 469 RRYIEVFQVSGNDVTYAL 486
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 35/188 (18%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQ----A 431
G+ +G+A F + H + ALK+H++++ RYIEV ++ ++F+ V + Q A
Sbjct: 307 GKASGDAFAVFSSEAHVEEALKKHRNNLMGRYIEVFHSSLKEFLVVLNKSGTPEQLDRFA 366
Query: 432 FLT-------------------------RGAQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
+L + +++RGLP+E T + VI FF
Sbjct: 367 YLNTESGGGGGGGRGGGGGSGGGASKRGGSEKNCVKLRGLPWEATPEDVISFF-----GD 421
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAE 525
N ++G+ V + TGD FV + A +A ++ H+++IG RYIE+F+ + +
Sbjct: 422 LNRSIEQQGIHMVLNAQSRPTGDCFVQMTSVDAATRAANELHRQNIGRRYIEVFQVSGND 481
Query: 526 VQQVLNKT 533
V L T
Sbjct: 482 VTYALMDT 489
>gi|159164103|pdb|2DHA|A Chain A, Solution Structure Of The Second Rna Recognition Motif In
Hypothetical Protein Flj201171
Length = 123
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 12 NEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFG----QHCPITGGKEGILFVTYPDGRP 67
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 68 TGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNR 113
>gi|340372253|ref|XP_003384659.1| PREDICTED: epithelial splicing regulatory protein 1-like
[Amphimedon queenslandica]
Length = 848
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 353 LNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTK 412
LN IPG GV ++ GRR GEAIV ++ AL+R +H++ +RY+EV +
Sbjct: 235 LNIIPG--------GVVFSINPVGRRTGEAIVVLEGEDQAQFALQRDRHYLHQRYVEVYE 286
Query: 413 ANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF--EAGTENSCNVM 470
A+ ++F + + F +RM+GLPY T +++FF EA N
Sbjct: 287 ASPDNFFQFCDTTGSSEKVF-------TVRMQGLPYRATESDIMEFFQPEAPVSNEA--- 336
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+G+L V+ PDGKA+GDAF +F E ++AL KH+ ++ RYIE+F S+ E VL
Sbjct: 337 ---DGILIVRYPDGKASGDAFAVFSSEAHVEEALKKHRNNLMGRYIEVFHSSLKEFLVVL 393
Query: 531 NKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
NK+ G Q G+ K+C++LRGLP+EA
Sbjct: 394 NKS--------------GTPEQLDRGGGGGGS-----GGASKRGGSEKNCVKLRGLPWEA 434
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ +G+A F + H + ALK+H++++ RYIEV ++ ++F+ V + Q L R
Sbjct: 347 GKASGDAFAVFSSEAHVEEALKKHRNNLMGRYIEVFHSSLKEFLVVLNKSGTPEQ--LDR 404
Query: 436 GAQV---------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
G +++RGLP+E T + VI FF N ++G+ V
Sbjct: 405 GGGGGGSGGASKRGGSEKNCVKLRGLPWEATPEDVISFF-----GDLNRSIEQQGIHMVL 459
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVLNKT 533
+ TGD FV + A +A ++ H+++IG RYIE+F+ + +V L T
Sbjct: 460 NAQSRPTGDCFVQMTSVDAATRAANELHRQNIGRRYIEVFQVSGNDVTYALMDT 513
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E ++ F G+ +I QG+HMV N+Q +P+G+ F+QM S +A AA H +N+
Sbjct: 437 EDVISFFGDLNRSIEQQGIHMVLNAQSRPTGDCFVQMTSVDAATRAANELHRQNI----G 492
Query: 123 QRYIEVFQCSGEDMNLVL 140
+RYIEVFQ SG D+ L
Sbjct: 493 RRYIEVFQVSGNDVTYAL 510
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 40/250 (16%)
Query: 367 GVALCLSAFGRRNGEAIVRF--IDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
G+ + L+A R G+ V+ +D R A + H+ +I +RYIEV + +G D
Sbjct: 454 GIHMVLNAQSRPTGDCFVQMTSVDAATR-AANELHRQNIGRRYIEVFQVSGNDVTYALMD 512
Query: 425 NNNEAQAFLT-------------RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
++ + + +++ RGLP+ ++DFF NV
Sbjct: 513 TGGGSRPGGGHAYYGGGGGNKRKKVSSAVVKARGLPFNTKEYDLVDFFA-----DFNV-- 565
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
E + + +G++TG A++ F+ +A +A+ + +YI + ++ L
Sbjct: 566 DESDIELIYNHNGRSTGVAYINFQSLNDARQAV----RDLNHKYIGHHKPSS------LK 615
Query: 532 KTMELPKNNS--LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
+ P +N + SN GL + P + G ++C+ L+G+P+E
Sbjct: 616 RVSSSPVSNYRLVNFSNRGLKRDCSTAT-----PSGEAEGESVNQGVIQNCLLLKGIPWE 670
Query: 590 ALCILMDIFF 599
+ FF
Sbjct: 671 TTVDKVTAFF 680
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+ + F G+ +SNIV G+H++Y+ GQ +G+ + M S A + NR+ +
Sbjct: 673 VDKVTAFFGDLSSNIVEDGIHLLYDKFGQSTGQCIVHMTDAASVQNAVGML-NRHYL--- 728
Query: 122 KQRYIEVFQCS 132
RY+++ CS
Sbjct: 729 GNRYVDLIPCS 739
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 22/165 (13%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANG---------- 415
G+ L FG+ G+ IV D A+ ++H++ RY+++ +
Sbjct: 691 GIHLLYDKFGQSTGQCIVHMTDAASVQNAVGMLNRHYLGNRYVDLIPCSNYYAKYQVARM 750
Query: 416 -EDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
D I +++ LT II+ GLP+ +++FF + N+
Sbjct: 751 KRDNIKSTESIDDKKLNRLT--PLTIIKAGGLPFSANVTDLVNFFVEFNVPASNIN---- 804
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIEL 518
V ++ G AFV F+ +A A+ K +E IG RY++L
Sbjct: 805 ---IVYDGTNRSVGIAFVGFQSRSDAVDAVKKLDREYIGRRYVDL 846
>gi|268529124|ref|XP_002629688.1| C. briggsae CBR-SYM-2 protein [Caenorhabditis briggsae]
Length = 613
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 99/167 (59%), Gaps = 33/167 (19%)
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G++ EA F++ A VI+RMRGLPY+CT Q+ FFE + E +LF+ + D
Sbjct: 258 GSSAEAMDFVSANA-VIVRMRGLPYDCTDTQIRAFFEP--------LKLTEKILFITRTD 308
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TG AFV FE EE+A + L KH++ IG RYIELF+ST AEVQQV+ + N +
Sbjct: 309 GRPTGCAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRC------NLIN 362
Query: 544 SSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
S+ P++++ +V + +KDC+RLRGLPYEA
Sbjct: 363 SA--------PVVANAVEV----------SDEKKKDCVRLRGLPYEA 391
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ V+HI+ FLG+FA+ + +QGVHMVYN+QG PSGEAFIQM SE +A A HN M
Sbjct: 390 EATVQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMISEQAAAATASGVHNNFMC 449
Query: 119 FGKKQRYIEVFQCSGEDMN 137
GKK+RYIEVFQ S E++N
Sbjct: 450 VGKKKRYIEVFQSSAEELN 468
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN--------N 427
GR G A V+F +E L +H+ I +RYIE+ K+ + V N
Sbjct: 309 GRPTGCAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSAPVVA 368
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
A + +R+RGLPYE T + +++F M +GV V G +
Sbjct: 369 NAVEVSDEKKKDCVRLRGLPYEATVQHIVNFL-----GDFANMVKFQGVHMVYNNQGNPS 423
Query: 488 GDAFV-LFEKEEEADKALSKHKESIGI----RYIELFRSTTAEV 526
G+AF+ + ++ A A H + + RYIE+F+S+ E+
Sbjct: 424 GEAFIQMISEQAAAATASGVHNNFMCVGKKKRYIEVFQSSAEEL 467
>gi|229891743|sp|A8WPC5.2|SYM2_CAEBR RecName: Full=RNA-binding protein sym-2; AltName: Full=Synthetic
lethal with mec-8 protein 2
Length = 634
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 35/181 (19%)
Query: 412 KANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
KANG+ ++ EA F++ A VI+RMRGLPY+CT Q+ FFE +
Sbjct: 259 KANGKIRKKPFLCSSAEAMDFVSANA-VIVRMRGLPYDCTDTQIRAFFEP--------LK 309
Query: 472 GEEGVLFVKKPDGKATG--DAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
E +LF+ + DG+ TG DAFV FE EE+A + L KH++ IG RYIELF+ST AEVQQV
Sbjct: 310 LTEKILFITRTDGRPTGNCDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQV 369
Query: 530 LNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
+ + N + S+ P++++ +V + +KDC+RLRGLPYE
Sbjct: 370 VKRC------NLINSA--------PVVANAVEV----------SDEKKKDCVRLRGLPYE 405
Query: 590 A 590
A
Sbjct: 406 A 406
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HI+ FLG+FA+ + +QGVHMVYN+QG PSGEAFIQM SE +A A HN M GK
Sbjct: 408 VQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMISEQAAAATASGVHNNFMCVGK 467
Query: 122 KQRYIEVFQCSGEDMN 137
K+RYIEVFQ S E++N
Sbjct: 468 KKRYIEVFQSSAEELN 483
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGA- 437
N +A V+F +E L +H+ I +RYIE+ K+ + V N A + A
Sbjct: 327 NCDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSAPVVANAV 386
Query: 438 -------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
+ +R+RGLPYE T + +++F M +GV V G +G+A
Sbjct: 387 EVSDEKKKDCVRLRGLPYEATVQHIVNFLGDFAN-----MVKFQGVHMVYNNQGNPSGEA 441
Query: 491 FV-LFEKEEEADKALSKHKESIGI----RYIELFRSTTAEV 526
F+ + ++ A A H + + RYIE+F+S+ E+
Sbjct: 442 FIQMISEQAAAATASGVHNNFMCVGKKKRYIEVFQSSAEEL 482
>gi|358253640|dbj|GAA53549.1| epithelial splicing regulatory protein 1 [Clonorchis sinensis]
Length = 1176
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 39/209 (18%)
Query: 356 IPGYEQVLGL--GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI---------- 403
I G+ L L GGVA+ L+ GRR+ AIV F + +AL RH+H
Sbjct: 395 IAGFFTGLNLIPGGVAIRLTD-GRRSNTAIVAFTSSLNAQLALARHQHQFCGALFPESPQ 453
Query: 404 ------------DKR--------YIEVTKANGEDFINVAGGNNNEAQAF---LTRGAQVI 440
DK+ ++V A+ +FI AG + F LT G QV+
Sbjct: 454 DTQQGVDRAGTKDKQAQTPTKPSTLQVYSASAREFIQCAGCDQPLVSEFLSQLTNGEQVV 513
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ T +Q++DFF+A V+ G+ V P+G+ TGDAFVLF ++ A
Sbjct: 514 VRVRGLPFTATKQQILDFFKA---VEAPVLLEANGIYLVAYPEGRPTGDAFVLFSDDKTA 570
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQV 529
+AL +HK+ +G RY+ELF+++ +E+ QV
Sbjct: 571 TRALLRHKDYLGDRYVELFKASPSEMVQV 599
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 63 EHILEFLGEFASNIVYQ--GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
+ IL+F + ++ + G+++V +G+P+G+AF+ + +A A LRH +
Sbjct: 526 QQILDFFKAVEAPVLLEANGIYLVAYPEGRPTGDAFVLFSDDKTATRAL-LRHKDYL--- 581
Query: 121 KKQRYIEVFQCSGEDMNLVLNGV 143
RY+E+F+ S +M V + V
Sbjct: 582 -GDRYVELFKASPSEMVQVCHNV 603
>gi|443700255|gb|ELT99307.1| hypothetical protein CAPTEDRAFT_198265, partial [Capitella teleta]
Length = 141
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 72/112 (64%), Gaps = 4/112 (3%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ V IL FLGE + +IV+QGVHMVYN+QG PSGEAFIQMDS+ SA +H + MI
Sbjct: 20 EATVTDILTFLGEHSRSIVFQGVHMVYNAQGTPSGEAFIQMDSDASAESTTLNKHRKFMI 79
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
K+RYIEV QCSGEDMNLVL LP A P + P MLP S P
Sbjct: 80 SNNKKRYIEVLQCSGEDMNLVLTSGLPQMGMAAPPASQ----PAMLPSVSIP 127
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLP+E T ++ F E+S +++ +GV V G +G+AF+ + + A
Sbjct: 12 IRLRGLPFEATVTDILTFL---GEHSRSIV--FQGVHMVYNAQGTPSGEAFIQMDSDASA 66
Query: 501 DK-ALSKHKESI----GIRYIELFRSTTAEVQQVLNKTM 534
+ L+KH++ + RYIE+ + + ++ VL +
Sbjct: 67 ESTTLNKHRKFMISNNKKRYIEVLQCSGEDMNLVLTSGL 105
>gi|74214262|dbj|BAE40375.1| unnamed protein product [Mus musculus]
Length = 512
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 63/78 (80%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRM 443
+ E FL+R QVI+R+
Sbjct: 335 SLEVARFLSREDQVILRL 352
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVDS 298
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 299 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 32/126 (25%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 D-----------------------MNLVLNGVLPPTS--PAISPVGKTLL--SPGMLPHS 167
+ + L +G+ PP P +SP +P ++P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLSRSGLSPPPCKLPCLSPPTYATFQATPALIPTE 385
Query: 168 SQPLYP 173
+ LYP
Sbjct: 386 TTALYP 391
>gi|313244027|emb|CBY14897.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 25/250 (10%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
V +CL GR +GEA+V D + ++A +HK ++ +RY+EV +++ +++N + +N+
Sbjct: 47 VIICLGRDGRPSGEALVGLYDSDSFELAKSKHKENLGRRYVEVYESSTAEYMNCSY-DND 105
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
+ A G + I++MRG+P+ T + DFF+ C++ G G++ +G A
Sbjct: 106 DGDASGFSGYEFIVKMRGMPFSATDHDIRDFFDG-----CSISPG--GIVICLGQNGSAN 158
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ--------QVLNKTMELPKN 539
G+A V F+ +E AD+AL +HK+++G RYIE+F+S++ ++Q + P
Sbjct: 159 GEALVQFDDKESADQALERHKKNMGQRYIEVFKSSSRDLQLAQGRNGGAGGGGSGGGPMR 218
Query: 540 NSLT-----SSNNGLSAQQPMLSHLAQVPVPYLPQH----IITSGTRKDCIRLRGLPYEA 590
NS + S G A +P + P + +G K + +RGLPY A
Sbjct: 219 NSRSGGPRASPYGGPPAGRPAIGGYGGSSAGGPPADPGAGLDENGQYKHIVHMRGLPYRA 278
Query: 591 LCILMDIFFV 600
+ FF+
Sbjct: 279 TEQEISEFFL 288
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ T +++ +F E N D E V+ DG+ +G+A V +
Sbjct: 20 VRLRGLPWSATKQEICEFLE-------NRPD-ESSVIICLGRDGRPSGEALVGLYDSDSF 71
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
+ A SKHKE++G RY+E++ S+TAE
Sbjct: 72 ELAKSKHKENLGRRYVEVYESSTAE 96
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF 418
GG+ +CL G NGEA+V+F D+E D AL+RHK ++ +RYIEV K++ D
Sbjct: 145 GGIVICLGQNGSANGEALVQFDDKESADQALERHKKNMGQRYIEVFKSSSRDL 197
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+ MRGLPY T +++ +FF N + V + + + G+A V F +
Sbjct: 268 IVHMRGLPYRATEQEISEFFLP-----VNTL----AVRIIFNRENRPAGEADVAFYTHAD 318
Query: 500 ADKALSKHKESIGIRYIELFRSTTAE 525
A +LSK ++++G RY+ELF +T +
Sbjct: 319 AQASLSKDRQNLGSRYVELFLRSTDD 344
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ + G +GEA +Q D + SA A + RH +NM QRYIEVF+ S D+ L
Sbjct: 146 GIVICLGQNGSANGEALVQFDDKESADQALE-RHKKNM----GQRYIEVFKSSSRDLQLA 200
>gi|196003222|ref|XP_002111478.1| hypothetical protein TRIADDRAFT_13868 [Trichoplax adhaerens]
gi|190585377|gb|EDV25445.1| hypothetical protein TRIADDRAFT_13868, partial [Trichoplax
adhaerens]
Length = 302
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGG 424
GG++ LS +G+R G+A V+F D RD+ALKRH +ID++ I + K N G+ FI GG
Sbjct: 27 GGISFLLSEYGKRYGQAYVKFEDTVQRDLALKRHSQYIDQKSIRIYKINAGQGFIPNVGG 86
Query: 425 NN--NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
N R ++R++GLP A V++FF+ + +V+D EEGVL +
Sbjct: 87 ATIVNALMKSNDRPEIALLRIKGLPSTVIAIDVVNFFKG----TADVLDNEEGVLLLLSA 142
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ TG+ +V F+ E A A+ K + + +IEL+ + LN ++ + + +
Sbjct: 143 DGRTTGEGYVAFKTPEIARSAIYKDYKIMANHHIELYDCS-------LNDALKALQESHI 195
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+SS +L++L Q + + +DCIRLRGLP+ A
Sbjct: 196 SSS---YRKNDKILTNLRQK----------SQESVRDCIRLRGLPFTA 230
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 65 ILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQR 124
I F+GE A I G+H+ N +G+PSG+A+IQM S A +A+ +H ++ R
Sbjct: 235 ITNFMGELADKIALNGIHLCINDRGRPSGDAYIQMLSAEDAIKSAEKKHREHL----GTR 290
Query: 125 YIEVFQCSGEDM 136
+IEVFQCS E++
Sbjct: 291 WIEVFQCSREEV 302
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQE-HRDMALKRHK----HHI---DKRYIEVTKANGEDF 418
GV L LSA GR GE V F E R K +K HHI D + KA E
Sbjct: 135 GVLLLLSADGRTTGEGYVAFKTPEIARSAIYKDYKIMANHHIELYDCSLNDALKALQESH 194
Query: 419 INVAGGNNNEAQAFLTRGAQV----IIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGE 473
I+ + N++ L + +Q IR+RGLP+ T + +F E + + N
Sbjct: 195 ISSSYRKNDKILTNLRQKSQESVRDCIRLRGLPFTATEPDITNFMGELADKIALN----- 249
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADK-ALSKHKESIGIRYIELFRSTTAEV 526
G+ G+ +GDA++ E+A K A KH+E +G R+IE+F+ + EV
Sbjct: 250 -GIHLCINDRGRPSGDAYIQMLSAEDAIKSAEKKHREHLGTRWIEVFQCSREEV 302
>gi|440793766|gb|ELR14941.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 622
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 12/176 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
GL + L LS GR GE F ++E AL + K + +RYIEV +++ E
Sbjct: 39 GLPSILLALSPSGRPTGEGYAHFDNEETFVKALAKDKERMGQRYIEVFACPQSDMEKAQM 98
Query: 421 VAGGNNNEAQAFLTRG----AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
+A G A A T ++RMRGLP+ T +++ FFE + V+DG GV
Sbjct: 99 LARGVTEGASAAATNEDDLQCAAVVRMRGLPFRATEGEIVAFFE---QAGVRVLDG--GV 153
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
L K PDG+ TG+A+V F +E+A +AL +H++ +G RYIELFRS E+ V+ +
Sbjct: 154 LICKNPDGRVTGEAYVQFGSDEDARRALERHRDQMGSRYIELFRSNKPELINVMRR 209
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 47/204 (23%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGV +C + GR GEA V+F E AL+RH+ + RYIE+ ++N + INV
Sbjct: 151 GGVLICKNPDGRVTGEAYVQFGSDEDARRALERHRDQMGSRYIELFRSNKPELINVMRRQ 210
Query: 426 NNEAQAFLTR--------------------------------------GAQVIIRMRGLP 447
R + ++R+RGLP
Sbjct: 211 QTTRDLQQQRGGYGRGHDHGHGHDHGHGHEHRGGYGGPPTGPPGAEEGDGEWVVRLRGLP 270
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH 507
+ T +++ ++F ++ + G+ +GDAF F+ E + + A+SK+
Sbjct: 271 FSATEEEIANWFAPMPARRVHI---------ILTGSGRPSGDAFAEFDNEAQWEHAMSKN 321
Query: 508 KESIGIRYIELFRSTTAEVQQVLN 531
++ +G RY+E+F S+ E+ L+
Sbjct: 322 RQHMGSRYVEIFGSSRHELMSSLS 345
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R+RGLP++ T + +FF+ G + + DG +L P G+ TG+ + F+
Sbjct: 5 SEFVVRLRGLPWQATEDDIKNFFQ-GLTFAPDGKDGLPSILLALSPSGRPTGEGYAHFDN 63
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
EE KAL+K KE +G RYIE+F +++++
Sbjct: 64 EETFVKALAKDKERMGQRYIEVFACPQSDMEKA 96
>gi|168015582|ref|XP_001760329.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688343|gb|EDQ74720.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 124/273 (45%), Gaps = 44/273 (16%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---- 418
+G GV +C++ GR G+A V+F E + AL+R++ HI RYIEV K + D
Sbjct: 46 MGPDGVVICVNFQGRSTGQAYVQFATAELANKALERNRQHIGSRYIEVFKGHPADMQGAL 105
Query: 419 --INVAGGNNNEAQAFLTRGA----------------QVIIRMRGLPYECTAKQVIDFFE 460
+ G + A T G ++RMRG+PY CT+ + FF+
Sbjct: 106 RMVGRGSGTVTGSGAVATGGILNTGIPGMSGNPDMRYTGVVRMRGMPYSCTSADITAFFK 165
Query: 461 AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
V+ +G+ DG+ TG+AFV F EE A +A+ H+E +G RY+ELFR
Sbjct: 166 G-----MQVV--ADGIFLCTHADGRPTGEAFVEFANEEIAARAMQLHREPMGSRYVELFR 218
Query: 521 STTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS----------HLAQVPVPYLPQH 570
ST E+ + + M + + S G+ M+ +LA V L
Sbjct: 219 STKGEMMTAVQQRMYGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSM 278
Query: 571 IITSG----TRKDCIRLRGLPYEA-LCILMDIF 598
G + CI++RGLPY A +MD F
Sbjct: 279 TGLQGLSDTSEHVCIKMRGLPYNAGQREIMDFF 311
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 53/206 (25%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN------------ 414
G+ LC A GR GEA V F ++E A++ H+ + RY+E+ ++
Sbjct: 173 GIFLCTHADGRPTGEAFVEFANEEIAARAMQLHREPMGSRYVELFRSTKGEMMTAVQQRM 232
Query: 415 ----------------------------GEDFINVAG------GNNNEAQAFLTRGAQVI 440
G +N+A G+ Q V
Sbjct: 233 YGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTGLQGLSDTSEHVC 292
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I+MRGLPY ++++DFFE N++ G+ V + TG+AFV F +EA
Sbjct: 293 IKMRGLPYNAGQREIMDFFEG-----YNIL--PNGIHIVMGATDRPTGEAFVEFISSDEA 345
Query: 501 DKALSKHKESIGIRYIELFRSTTAEV 526
+A+ +H+++IG RYIELFR+T +E+
Sbjct: 346 QRAMERHRQNIGSRYIELFRATKSEM 371
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 23/167 (13%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ + + DFF+ G E G +GV+ G++TG A+V F E
Sbjct: 22 VVRLRGLPFSASESDIADFFK-GLEM------GPDGVVICVNFQGRSTGQAYVQFATAEL 74
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
A+KAL ++++ IG RYIE+F+ A++Q L + S T + +G A +L+
Sbjct: 75 ANKALERNRQHIGSRYIEVFKGHPADMQGAL----RMVGRGSGTVTGSGAVATGGILN-- 128
Query: 560 AQVPVPYL---PQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ 603
+P + P T +R+RG+PY + FF G Q
Sbjct: 129 --TGIPGMSGNPDMRYTG-----VVRMRGMPYSCTSADITAFFKGMQ 168
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
G+ + + A R GEA V FI + A++RH+ +I RYIE+ +A + + GG
Sbjct: 320 GIHIVMGATDRPTGEAFVEFISSDEAQRAMERHRQNIGSRYIELFRATKSEMLLATGG 377
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
I++F + NI+ G+H+V + +P+GEAF++ S A A + RH +N+
Sbjct: 305 REIMDFFEGY--NILPNGIHIVMGATDRPTGEAFVEFISSDEAQRAME-RHRQNI----G 357
Query: 123 QRYIEVFQCSGEDMNLVLNGV 143
RYIE+F+ + +M L G+
Sbjct: 358 SRYIELFRATKSEMLLATGGL 378
>gi|168037998|ref|XP_001771489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677216|gb|EDQ63689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 125/273 (45%), Gaps = 44/273 (16%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-- 420
+G GV +C++ GR G+A V+F E + AL+R++ HI RYIEV K + D
Sbjct: 46 MGPDGVVICVNFQGRSTGQAYVQFASAELANKALERNRQHIGSRYIEVFKGHPADMQGAL 105
Query: 421 ---------VAGGNNNEAQAFLTRGA-----------QVIIRMRGLPYECTAKQVIDFFE 460
V+G + L G ++RMRG+PY CT+ + FF+
Sbjct: 106 RMVGRGSGVVSGSGAVASGGILNTGIPGMSGNPDMRYTGVVRMRGMPYSCTSADITAFFK 165
Query: 461 AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
V+ +G+ DG+ TG+AFV F EE A +A+ H+E +G RY+ELFR
Sbjct: 166 G-----MQVV--ADGIFLCTHADGRPTGEAFVEFVNEETAARAMQLHREPMGSRYVELFR 218
Query: 521 STTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS----------HLAQVPVPYLPQH 570
ST E+ + + M + + S G+ M+ +LA V L
Sbjct: 219 STKGEMMTAVQQRMYGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSM 278
Query: 571 IITSG----TRKDCIRLRGLPYEA-LCILMDIF 598
+ G + CI++RGLPY A +MD F
Sbjct: 279 TVPQGLSDTSEHVCIKMRGLPYNAGQREIMDFF 311
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 53/206 (25%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINV---- 421
G+ LC A GR GEA V F+++E A++ H+ + RY+E+ ++ GE V
Sbjct: 173 GIFLCTHADGRPTGEAFVEFVNEETAARAMQLHREPMGSRYVELFRSTKGEMMTAVQQRM 232
Query: 422 ------AGGNNNEA--------QAFLTRG---------------------------AQVI 440
AGG + AF +G V
Sbjct: 233 YGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTVPQGLSDTSEHVC 292
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I+MRGLPY ++++DFFE G N G+ V + TG+AFV F +EA
Sbjct: 293 IKMRGLPYNAGQREIMDFFE-GYSFLPN------GIHIVMGATDRPTGEAFVEFMSSDEA 345
Query: 501 DKALSKHKESIGIRYIELFRSTTAEV 526
+A+ +H+++IG RYIELFR+T +E+
Sbjct: 346 QRAMERHRQNIGSRYIELFRATKSEM 371
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T + DFF+ G E G +GV+ G++TG A+V F E
Sbjct: 22 VVRLRGLPFSATESDIADFFK-GLEM------GPDGVVICVNFQGRSTGQAYVQFASAEL 74
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
A+KAL ++++ IG RYIE+F+ A++Q L + S S +G A +L+
Sbjct: 75 ANKALERNRQHIGSRYIEVFKGHPADMQGAL----RMVGRGSGVVSGSGAVASGGILN-- 128
Query: 560 AQVPVPYL---PQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ 603
+P + P T +R+RG+PY + FF G Q
Sbjct: 129 --TGIPGMSGNPDMRYTG-----VVRMRGMPYSCTSADITAFFKGMQ 168
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
G+ + + A R GEA V F+ + A++RH+ +I RYIE+ +A + + GG
Sbjct: 320 GIHIVMGATDRPTGEAFVEFMSSDEAQRAMERHRQNIGSRYIELFRATKSEMLLATGG 377
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H+V + +P+GEAF++ S A A + RH +N+ RYIE+F+ + +M L
Sbjct: 320 GIHIVMGATDRPTGEAFVEFMSSDEAQRAME-RHRQNI----GSRYIELFRATKSEMLLA 374
Query: 140 LNGV 143
G+
Sbjct: 375 TGGL 378
>gi|402583247|gb|EJW77191.1| hypothetical protein WUBG_11899 [Wuchereria bancrofti]
Length = 82
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+RMRGLPY+CT Q+++FF G EN C V DG G+LFV K DG+ TGDAFV+F+ EE
Sbjct: 1 MIVRMRGLPYDCTEAQILEFFAEG-ENGCKVTDG--GILFVNKSDGRPTGDAFVMFDNEE 57
Query: 499 EADKALSKHKESIGIRYIELFR 520
KAL+KHK +IG RYIELFR
Sbjct: 58 AGQKALTKHKRTIGTRYIELFR 79
>gi|302794117|ref|XP_002978823.1| hypothetical protein SELMODRAFT_443985 [Selaginella moellendorffii]
gi|300153632|gb|EFJ20270.1| hypothetical protein SELMODRAFT_443985 [Selaginella moellendorffii]
Length = 478
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 35/265 (13%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---I 419
LG G+ +C++ GR G+A V+F E + +L+R++ HI RYIEV K + D +
Sbjct: 46 LGPDGIVICVNFQGRSTGQAYVQFATAELANKSLERNRQHIGSRYIEVFKGHPADMQGAM 105
Query: 420 NVAG-GNNNEAQAFLTRGAQV-------------IIRMRGLPYECTAKQVIDFFEAGTEN 465
+AG G++ A +G + ++RMRG+PY CT+ ++ FF+
Sbjct: 106 RMAGRGSSGAYGAAGLQGTGIPGMAGNPDMRFTGVVRMRGMPYSCTSADIMAFFK----- 160
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+ +G+ DG+ TG+AFV F EE A +A+ H+E +G RY+ELF+ST E
Sbjct: 161 --GMQVAPDGIFLCTHADGRPTGEAFVEFINEETAARAMQLHREPMGSRYVELFKSTKGE 218
Query: 526 VQQVLNKTMELPKNNSLTSSNNGLSAQQP-MLSHLAQVPVPYLPQHIITS---GTRKD-- 579
+ + + + ++ S G Q P ML V L + S G D
Sbjct: 219 MMTSVQQKLWFAGVGNM--SPVGSLGQIPGMLGGYGMQGVGALNLGAVQSPGPGAIGDIS 276
Query: 580 ---CIRLRGLPYEALCILMDIFFVG 601
CI++RGLPY + + FF G
Sbjct: 277 EDVCIKMRGLPYNSGPREITEFFQG 301
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 46/199 (23%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVA--- 422
G+ LC A GR GEA V FI++E A++ H+ + RY+E+ K+ GE +V
Sbjct: 168 GIFLCTHADGRPTGEAFVEFINEETAARAMQLHREPMGSRYVELFKSTKGEMMTSVQQKL 227
Query: 423 ---------------------GGNNNEAQAFLTRGA--------------QVIIRMRGLP 447
GG + L GA V I+MRGLP
Sbjct: 228 WFAGVGNMSPVGSLGQIPGMLGGYGMQGVGALNLGAVQSPGPGAIGDISEDVCIKMRGLP 287
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH 507
Y +++ +FF+ G N G+ V + TG+AFV F +EA +A+ +H
Sbjct: 288 YNSGPREITEFFQ-GYRIVPN------GIYVVIGATDRPTGEAFVEFISSKEAQRAMERH 340
Query: 508 KESIGIRYIELFRSTTAEV 526
+ +IG RYIELFR+T +E+
Sbjct: 341 RNNIGSRYIELFRATKSEM 359
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ T + +FF +D G +G++ G++TG A+V F E
Sbjct: 22 VVRLRGLPFSATEVDIKEFFRG--------LDLGPDGIVICVNFQGRSTGQAYVQFATAE 73
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
A+K+L ++++ IG RYIE+F+ A++Q + + +S GL Q +
Sbjct: 74 LANKSLERNRQHIGSRYIEVFKGHPADMQGAMRMA---GRGSSGAYGAAGL--QGTGIPG 128
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVGQQ 603
+A P +R+RG+PY C DI FF G Q
Sbjct: 129 MAGNPDMRF----------TGVVRMRGMPYS--CTSADIMAFFKGMQ 163
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
G+ + + A R GEA V FI + A++RH+++I RYIE+ +A + I GG
Sbjct: 308 GIYVVIGATDRPTGEAFVEFISSKEAQRAMERHRNNIGSRYIELFRATKSEMIVATGG 365
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCS-GEDMNL 138
G+ + ++ G+P+GEAF++ +E +A A QL H M RY+E+F+ + GE M
Sbjct: 168 GIFLCTHADGRPTGEAFVEFINEETAARAMQL-HREPM----GSRYVELFKSTKGEMMTS 222
Query: 139 VLNGVLPPTSPAISPVGKTLLSPGML 164
V + +SPVG PGML
Sbjct: 223 VQQKLWFAGVGNMSPVGSLGQIPGML 248
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
I EF + IV G+++V + +P+GEAF++ S A A + RH N+
Sbjct: 293 REITEFFQGY--RIVPNGIYVVIGATDRPTGEAFVEFISSKEAQRAME-RHRNNI----G 345
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
RYIE+F+ + +M +V G LP + + P
Sbjct: 346 SRYIELFRATKSEM-IVATGGLPFSMGQLDP 375
>gi|302805965|ref|XP_002984733.1| hypothetical protein SELMODRAFT_446014 [Selaginella moellendorffii]
gi|300147715|gb|EFJ14378.1| hypothetical protein SELMODRAFT_446014 [Selaginella moellendorffii]
Length = 483
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 35/265 (13%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---I 419
LG G+ +C++ GR G+A V+F E + +L+R++ HI RYIEV K + D +
Sbjct: 46 LGPDGIVICVNFQGRSTGQAYVQFATAELANKSLERNRQHIGSRYIEVFKGHPADMQGAM 105
Query: 420 NVAG-GNNNEAQAFLTRGAQV-------------IIRMRGLPYECTAKQVIDFFEAGTEN 465
+AG G++ A +G + ++RMRG+PY CT+ ++ FF+
Sbjct: 106 RMAGRGSSGAYGAAGLQGTGIPGMAGNPDMRFTGVVRMRGMPYSCTSADIMAFFKG---- 161
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+ +G+ DG+ TG+AFV F EE A +A+ H+E +G RY+ELF+ST E
Sbjct: 162 ---MQVAPDGIFLCTHADGRPTGEAFVEFINEETAARAMQLHREPMGSRYVELFKSTKGE 218
Query: 526 VQQVLNKTMELPKNNSLTSSNNGLSAQQP-MLSHLAQVPVPYLPQHIITS---GTRKD-- 579
+ + + + ++ S G Q P ML V L + S G D
Sbjct: 219 MMTSVQQKLWFAGVGNM--SPVGSLGQIPGMLGGYGMQGVGALNLGAVQSPGPGAIGDIS 276
Query: 580 ---CIRLRGLPYEALCILMDIFFVG 601
CI++RGLPY + + FF G
Sbjct: 277 EDVCIKMRGLPYNSGPREITEFFQG 301
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 46/199 (23%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVA--- 422
G+ LC A GR GEA V FI++E A++ H+ + RY+E+ K+ GE +V
Sbjct: 168 GIFLCTHADGRPTGEAFVEFINEETAARAMQLHREPMGSRYVELFKSTKGEMMTSVQQKL 227
Query: 423 ---------------------GGNNNEAQAFLTRGA--------------QVIIRMRGLP 447
GG + L GA V I+MRGLP
Sbjct: 228 WFAGVGNMSPVGSLGQIPGMLGGYGMQGVGALNLGAVQSPGPGAIGDISEDVCIKMRGLP 287
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH 507
Y +++ +FF+ G N G+ V + TG+AFV F +EA +A+ +H
Sbjct: 288 YNSGPREITEFFQ-GYRIVPN------GIYVVIGATDRPTGEAFVEFISSKEAQRAMERH 340
Query: 508 KESIGIRYIELFRSTTAEV 526
+ +IG RYIELFR+T +E+
Sbjct: 341 RNNIGSRYIELFRATKSEM 359
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ T + +FF +D G +G++ G++TG A+V F E
Sbjct: 22 VVRLRGLPFSATEVDIKEFFRG--------LDLGPDGIVICVNFQGRSTGQAYVQFATAE 73
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
A+K+L ++++ IG RYIE+F+ A++Q + + +S GL Q +
Sbjct: 74 LANKSLERNRQHIGSRYIEVFKGHPADMQGAMRMA---GRGSSGAYGAAGL--QGTGIPG 128
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVGQQ 603
+A P +R+RG+PY C DI FF G Q
Sbjct: 129 MAGNPDMRF----------TGVVRMRGMPYS--CTSADIMAFFKGMQ 163
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
G+ + + A R GEA V FI + A++RH+++I RYIE+ +A + I GG
Sbjct: 308 GIYVVIGATDRPTGEAFVEFISSKEAQRAMERHRNNIGSRYIELFRATKSEMIVATGG 365
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCS-GEDMN 137
G+ + ++ G+P+GEAF++ +E +A A QL H M RY+E+F+ + GE M
Sbjct: 167 DGIFLCTHADGRPTGEAFVEFINEETAARAMQL-HREPM----GSRYVELFKSTKGEMMT 221
Query: 138 LVLNGVLPPTSPAISPVGKTLLSPGML 164
V + +SPVG PGML
Sbjct: 222 SVQQKLWFAGVGNMSPVGSLGQIPGML 248
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
I EF + IV G+++V + +P+GEAF++ S A A + RH N+
Sbjct: 293 REITEFFQGY--RIVPNGIYVVIGATDRPTGEAFVEFISSKEAQRAME-RHRNNI----G 345
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
RYIE+F+ + +M +V G LP + + P
Sbjct: 346 SRYIELFRATKSEM-IVATGGLPFSMGQLDP 375
>gi|351699543|gb|EHB02462.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 372
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 25/236 (10%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 38 GVAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 98 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL----- 536
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+ + ++
Sbjct: 146 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFTSVQQ 205
Query: 537 --PKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P ++ T+ +Q L + Y T C+ +RGLPY+A
Sbjct: 206 PGPYDHPDTARRYIGIVKQAGLERMRS----YGDGEFTVQSTTGHCVHMRGLPYKA 257
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 44/169 (26%)
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
RG ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 6 RGEAYVVKLRGLPWSCSIEDVQNFL-----SDCTIRDGVAGVHFIYTREGRQSGEAFVEL 60
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
E E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 61 ESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF----- 111
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 112 --------------------------VRLRGLPFG--CTKEEIVQFFSG 132
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 44/192 (22%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED--------- 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 139 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPL 198
Query: 418 -------------------FINVAGGNNNEAQAFLTRGAQVI-------IRMRGLPYECT 451
+I + E G + + MRGLPY+ T
Sbjct: 199 KFTSVQQPGPYDHPDTARRYIGIVKQAGLERMRSYGDGEFTVQSTTGHCVHMRGLPYKAT 258
Query: 452 AKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESI 511
+ +FF ++ G PDG+ TG+A V F EEA A+SK + ++
Sbjct: 259 ENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEAVAAMSKDRANM 309
Query: 512 GIRYIELFRSTT 523
RYIELF ++T
Sbjct: 310 QHRYIELFLNST 321
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 23 IEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 77
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 78 GHRYIEVFKSHRTEMDWVLKHSGPNSA 104
>gi|213513203|ref|NP_001135339.1| G-rich sequence factor 1 [Salmo salar]
gi|209734348|gb|ACI68043.1| G-rich sequence factor 1 [Salmo salar]
Length = 400
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 125/245 (51%), Gaps = 43/245 (17%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRD---MALKRHKHHIDKRYIEVTKANGEDFIN 420
G+ G+ L ++ G+ NG+A FI+ EH D AL++H+ ++ RYIEV +
Sbjct: 129 GVKGIHLTVNRDGKPNGQA---FIELEHEDDVGKALEKHRQYLGPRYIEVFEVT------ 179
Query: 421 VAGGNNNEAQAFLTRGAQV-----IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEE 474
N++A+ L + Q+ ++R+RGLPY CT V+ FF +D E+
Sbjct: 180 -----NSDAETILKKSVQLPARDGVVRIRGLPYSCTETDVMLFFSG--------LDVAED 226
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM 534
GV V G+ +G+A+V F +E+AD+AL++ ++ IG RYIE+F S +E+ KT
Sbjct: 227 GVTLVTDYRGRNSGEAYVQFLTQEQADEALTRDRQVIGNRYIEVFPSRRSEIGG-RKKTE 285
Query: 535 ELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCIL 594
+ + + S A QP S PV LPQH + +RGLP++A
Sbjct: 286 SVEEGRNSIQSQPHRPAAQP--SRHGSHPVSSLPQHF---------VHMRGLPFQATGDD 334
Query: 595 MDIFF 599
+ FF
Sbjct: 335 IVQFF 339
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 43/162 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IIR +GLP+ CT + ++ FF + C V DG +G+ DGK G AF+ E E++
Sbjct: 102 IIRAKGLPWSCTTEDLLQFF-----SECRVRDGVKGIHLTVNRDGKPNGQAFIELEHEDD 156
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH++ +G RYIE+F T ++ + +L K+++LP
Sbjct: 157 VGKALEKHRQYLGPRYIEVFEVTNSDAETILKKSVQLP---------------------- 194
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
R +R+RGLPY + +FF G
Sbjct: 195 ----------------ARDGVVRIRGLPYSCTETDVMLFFSG 220
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV-----TKANGEDFINV 421
GV L GR +GEA V+F+ QE D AL R + I RYIEV ++ G
Sbjct: 227 GVTLVTDYRGRNSGEAYVQFLTQEQADEALTRDRQVIGNRYIEVFPSRRSEIGGRKKTES 286
Query: 422 AGGNNNEAQAFLTRGA---------------QVIIRMRGLPYECTAKQVIDFFEAGTENS 466
N Q+ R A Q + MRGLP++ T ++ FF +
Sbjct: 287 VEEGRNSIQSQPHRPAAQPSRHGSHPVSSLPQHFVHMRGLPFQATGDDIVQFFSPLALSR 346
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
V G PDG+A+G+A V F ++A A+++ K + RYIELF ++T+
Sbjct: 347 ILVEFG---------PDGRASGEADVYFTSHQDAVSAMTRDKAHMQERYIELFLNSTS 395
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E +L+F E +G+H+ N G+P+G+AFI++ EH + L +R +
Sbjct: 114 TEDLLQFFSECRVRDGVKGIHLTVNRDGKPNGQAFIEL--EHEDDVGKALEKHRQYL--- 168
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ + D +L
Sbjct: 169 GPRYIEVFEVTNSDAETILK 188
>gi|344274318|ref|XP_003408964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Loxodonta africana]
Length = 414
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V +E MALK+ + + RYIEV K++ D++
Sbjct: 38 GVAGVHFIYTREGRQSGEAFVELESEEDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 98 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIMPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 146 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 191
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 7 GEGFVVKLRGLPWSCSIEDVQNFL-----SECKIHDGVAGVHFIYTREGRQSGEAFVELE 61
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
EE+ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 62 SEEDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 111
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 290 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 340
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ GL +Q
Sbjct: 341 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSTQSTYTGLESQ 393
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL E + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 23 IEDVQNFLSECKIHDGVAGVHFIYTREGRQSGEAFVELESEEDVKMA--LKKDRESM--- 77
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 78 GHRYIEVFKSHRTEMDWVLKHSGPNSA 104
>gi|346473523|gb|AEO36606.1| hypothetical protein [Amblyomma maculatum]
Length = 412
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + LS GR +GEA + ++ ++ L+RH HI RYIEV K+ + V
Sbjct: 40 GINGVHMTLSREGRPSGEAYIELESEQDVEVGLQRHNEHIGHRYIEVFKSKRSEMDWVVK 99
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ Q L G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 100 RSGAHQQDSLNDGC---VRLRGLPFGCSKEEIAQFF-SGLEIVPN------GITLPTDYQ 149
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
G++TG+AFV F + A+KA+ KHKE IG RYIE+F+S+ EV+ + M +PK
Sbjct: 150 GRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEVRSAIG--MGVPK 202
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 38/162 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T +++++FF T CN+ G GV +G+ +G+A++ E E++
Sbjct: 11 VLRIRGLPWSTTKEEILNFF---TSKECNIKGGINGVHMTLSREGRPSGEAYIELESEQD 67
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ L +H E IG RYIE+F+S +E+ V+ ++ ++ S N+G
Sbjct: 68 VEVGLQRHNEHIGHRYIEVFKSKRSEMDWVVKRSGAHQQD----SLNDG----------- 112
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 113 --------------------CVRLRGLPFGCSKEEIAQFFSG 134
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 59/207 (28%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG--- 423
G+ L GR GEA V+F ++ + A+ +HK I RYIE+ K++ ++ + G
Sbjct: 141 GITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEVRSAIGMGV 200
Query: 424 ------------GNNNEAQAF--------LTRGAQVI----------------------- 440
G + A F + RG +
Sbjct: 201 PKMMRPMGGARPGPYDRADRFGGGPSRYGMGRGGRNFRGFVEEDGYGGFGGPGGGAHFSA 260
Query: 441 ----IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ MRGLP+ T + + +FF+ N NV + + G+ +G+ V F
Sbjct: 261 TGHFVHMRGLPFRATERDIFEFFQP--MNPVNVH-------LIYEDSGRPSGECDVEFAT 311
Query: 497 EEEADKALSKHKESIGIRYIELFRSTT 523
EEA KA+SK K + RYIELF ++T
Sbjct: 312 HEEAVKAMSKDKAHMQHRYIELFLNST 338
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 63 EHILEFLGEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
E IL F NI GVHM + +G+PSGEA+I+++SE + Q RHN ++
Sbjct: 24 EEILNFFTSKECNIKGGINGVHMTLSREGRPSGEAYIELESEQDVEVGLQ-RHNEHI--- 79
Query: 121 KKQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ V+
Sbjct: 80 -GHRYIEVFKSKRSEMDWVVK 99
>gi|405952153|gb|EKC19997.1| Heterogeneous nuclear ribonucleoprotein H [Crassostrea gigas]
Length = 544
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 14/176 (7%)
Query: 360 EQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV--TKANGED 417
E V G GV S GR +GE V ID+++ LK H H+ RYIEV +K + D
Sbjct: 67 EIVDGEQGVHFTFSREGRPSGECFVELIDEDNVQRGLKCHNKHMGNRYIEVFRSKKSEMD 126
Query: 418 FINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
++ G + + ++R+RGLP+ C+ +++ FF G E N G++
Sbjct: 127 WVIKRAGPGQ-----MPGSCEAVVRLRGLPFGCSKEEIAQFF-TGLEIVPN------GIM 174
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ G++TG+A+V F +E A+KALSKHKE IG RYIE+F+S E Q + +T
Sbjct: 175 LPEDRQGRSTGEAYVQFASQEIAEKALSKHKERIGHRYIEIFKSGMQEAQNAMGQT 230
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ T +V+ FF E ++DGE+GV F +G+ +G+ FV E+
Sbjct: 42 CVVRLRGLPWSATESEVVKFFGEDVE----IVDGEQGVHFTFSREGRPSGECFVELIDED 97
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ L H + +G RYIE+FRS +E+ V+ +
Sbjct: 98 NVQRGLKCHNKHMGNRYIEVFRSKKSEMDWVIKRA 132
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP++ + DFF T V F P+G+ TG+A V F+ +A
Sbjct: 391 VHMRGLPFQALESDIADFFSPLTPVR---------VEFEFAPNGRPTGEANVDFKTHSDA 441
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQ 528
+A+S+HK+++ RYIELF ++T +Q
Sbjct: 442 VEAMSRHKKNMQHRYIELFLNSTPTGRQ 469
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 64 HILEFLGEFASNI-VYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+++F GE + QGVH ++ +G+PSGE F+++ E + + HN++M
Sbjct: 57 EVVKFFGEDVEIVDGEQGVHFTFSREGRPSGECFVELIDEDNVQRGLKC-HNKHM----G 111
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ V+ P P
Sbjct: 112 NRYIEVFRSKKSEMDWVIKRAGPGQMPG 139
>gi|325303152|tpg|DAA34329.1| TPA_inf: splicing factor hnRNP-F [Amblyomma variegatum]
Length = 231
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + LS GR +GEA + ++ ++ L+RH HI RYIEV K+ + V
Sbjct: 40 GINGVHMTLSREGRPSGEAYIELESEQDMEIGLQRHNEHIGHRYIEVFKSKRSEMDWVVK 99
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ Q L G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 100 RSGAHQQDSLNDGC---VRLRGLPFGCSKEEIAQFF-SGLEIVPN------GITLPTDYQ 149
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
G++TG+AFV F + A+KA+ KHKE IG RYIE+F+S+ EV+ + M +PK
Sbjct: 150 GRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEVRSAVR--MGVPK 202
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 38/162 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T +++++FF T C++ G GV +G+ +G+A++ E E++
Sbjct: 11 VLRIRGLPWSTTKEEILNFF---TAKECHIKGGINGVHMTLSREGRPSGEAYIELESEQD 67
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ L +H E IG RYIE+F+S +E+ V+ ++ ++ S N+G
Sbjct: 68 MEIGLQRHNEHIGHRYIEVFKSKRSEMDWVVKRSGAHQQD----SLNDG----------- 112
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 113 --------------------CVRLRGLPFGCSKEEIAQFFSG 134
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GVHM + +G+PSGEA+I+++SE + Q RHN ++ RYIEVF+ +M+ V
Sbjct: 43 GVHMTLSREGRPSGEAYIELESEQDMEIGLQ-RHNEHI----GHRYIEVFKSKRSEMDWV 97
Query: 140 LN 141
+
Sbjct: 98 VK 99
>gi|302828822|ref|XP_002945978.1| splicing factor like protein [Volvox carteri f. nagariensis]
gi|300268793|gb|EFJ52973.1| splicing factor like protein [Volvox carteri f. nagariensis]
Length = 578
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 376 GRRNGEAIVRFIDQEHRDMA-LKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR GE V+ A +K H+ + RYIEV ++ D + + + F
Sbjct: 71 GRSTGEGYVQLDSTSAAAEAIMKLHRQTLGHRYIEVFESTEADLATAKSLSVDRMRGF-- 128
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
++R RGLPY TA+ V++FF + V+ G EGV+F PDG+ TG+AFV F
Sbjct: 129 -----VVRCRGLPYTATAQDVLNFFG----SDAPVVRGIEGVVFTYAPDGRPTGEAFVEF 179
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ E+ +AL KHKES+G RYIELF ST ++ Q + +
Sbjct: 180 QTEDAQREALKKHKESMGARYIELFVSTKVDMIQAIQQ 217
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ + V FF + NV + + K G++TG+ +V +
Sbjct: 37 VLRLRGLPFSAGEEDVRHFF-----SGFNVAQ-----VVIGKRAGRSTGEGYVQLDSTSA 86
Query: 500 ADKALSK-HKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
A +A+ K H++++G RYIE+F ST A++ K++ + + GL
Sbjct: 87 AAEAIMKLHRQTLGHRYIEVFESTEADL--ATAKSLSVDRMRGFVVRCRGL 135
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
V G+ GV + GR GEA V F ++ + ALK+HK + RYIE+ + D I
Sbjct: 155 VRGIEGVVFTYAPDGRPTGEAFVEFQTEDAQREALKKHKESMGARYIELFVSTKVDMIQA 214
>gi|346465413|gb|AEO32551.1| hypothetical protein [Amblyomma maculatum]
Length = 434
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + LS GR +GEA + ++ ++ L+RH HI RYIEV K+ + V
Sbjct: 63 GINGVHMTLSREGRPSGEAYIELESEQDVEIGLQRHNEHIGHRYIEVFKSKRSEMDWVVK 122
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ Q L G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 123 RSGAHQQDSLNDGC---VRLRGLPFGCSKEEIAQFF-SGLEIVPN------GITLPTDYQ 172
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
G++TG+AFV F + A+KA+ KHKE IG RYIE+F+S+ E++ + M +PK
Sbjct: 173 GRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVG--MGVPK 225
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 38/162 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T +++++FF T C++ G GV +G+ +G+A++ E E++
Sbjct: 34 VLRIRGLPWSTTKEEILNFF---TSKECHIKGGINGVHMTLSREGRPSGEAYIELESEQD 90
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ L +H E IG RYIE+F+S +E+ V+ ++ ++ S N+G
Sbjct: 91 VEIGLQRHNEHIGHRYIEVFKSKRSEMDWVVKRSGAHQQD----SLNDG----------- 135
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 136 --------------------CVRLRGLPFGCSKEEIAQFFSG 157
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 59/207 (28%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG--- 423
G+ L GR GEA V+F ++ + A+ +HK I RYIE+ K++ ++ + G
Sbjct: 164 GITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVGMGV 223
Query: 424 --------------------------------GNNN-----EAQAFLTRGAQV------- 439
G N E + G V
Sbjct: 224 PKMMRPMGTGRPGPYDRVERFGGGPSRYGMGRGGRNFRGFVEEDGYGDFGGSVGGSHFSA 283
Query: 440 ---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ MRGLP+ T + + +FF+ N NV F+ + G+ +G+ V F
Sbjct: 284 TGHFVHMRGLPFRATERDIFEFFQP--MNPVNVH-------FIYEDSGRPSGECDVEFAT 334
Query: 497 EEEADKALSKHKESIGIRYIELFRSTT 523
EEA KA+SK K + RYIELF ++T
Sbjct: 335 HEEAVKAMSKDKAHMQHRYIELFLNST 361
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GVHM + +G+PSGEA+I+++SE + Q RHN ++ RYIEVF+ +M+ V
Sbjct: 66 GVHMTLSREGRPSGEAYIELESEQDVEIGLQ-RHNEHI----GHRYIEVFKSKRSEMDWV 120
Query: 140 LN 141
+
Sbjct: 121 VK 122
>gi|402880032|ref|XP_003903619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Papio anubis]
gi|402880034|ref|XP_003903620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Papio anubis]
gi|402880036|ref|XP_003903621.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Papio anubis]
gi|402880038|ref|XP_003903622.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Papio anubis]
gi|402880040|ref|XP_003903623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Papio anubis]
gi|402880042|ref|XP_003903624.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6
[Papio anubis]
gi|402880044|ref|XP_003903625.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Papio anubis]
gi|402880046|ref|XP_003903626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8
[Papio anubis]
gi|402880048|ref|XP_003903627.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 9
[Papio anubis]
gi|402880050|ref|XP_003903628.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Papio anubis]
gi|402880052|ref|XP_003903629.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Papio anubis]
gi|402880054|ref|XP_003903630.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Papio anubis]
gi|402880056|ref|XP_003903631.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Papio anubis]
gi|402880058|ref|XP_003903632.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 14
[Papio anubis]
Length = 415
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT +++I FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIIQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|351714959|gb|EHB17878.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 413
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 38 GVAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 98 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 146 PEGKITGEAFVQFASQELAEKALRKHKERIGHRYIEVFKSSQQEVR 191
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 7 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIRDGVAGVHFIYTREGRQSGEAFVELE 61
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 62 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 111
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF + N M V PDG+ TG+A V F EEA
Sbjct: 289 VHMRGLPYKATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEEA 339
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 340 VPAMSKDRANMQHRYIELFLNST 362
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 23 IEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 77
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ VL
Sbjct: 78 GHRYIEVFKSHRTEMDWVLK 97
>gi|427789699|gb|JAA60301.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 411
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + LS GR +GEA + ++ ++ L+RH HI RYIEV K+ + V
Sbjct: 40 GINGVHMTLSREGRPSGEAYIELESEQDMEIGLQRHNEHIGHRYIEVFKSKRSEMDWVVK 99
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ Q L G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 100 RSGAHQQDSLNDGC---VRLRGLPFGCSKEEIAQFF-SGLEIVPN------GITLPTDYQ 149
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
G++TG+AFV F + A+KA+ KHKE IG RYIE+F+S+ E++ + M +PK
Sbjct: 150 GRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVG--MGVPK 202
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 38/162 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T +++++FF T C++ G GV +G+ +G+A++ E E++
Sbjct: 11 VLRIRGLPWSTTKEEILNFF---TSKECHIKGGINGVHMTLSREGRPSGEAYIELESEQD 67
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ L +H E IG RYIE+F+S +E+ V+ ++ + QQ L+
Sbjct: 68 MEIGLQRHNEHIGHRYIEVFKSKRSEMDWVVKRSG---------------AHQQDSLN-- 110
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 111 ------------------DGCVRLRGLPFGCSKEEIAQFFSG 134
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 59/207 (28%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG--- 423
G+ L GR GEA V+F ++ + A+ +HK I RYIE+ K++ ++ + G
Sbjct: 141 GITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVGMGV 200
Query: 424 ------------GNNNEAQAF--------LTRGAQVI----------------------- 440
G + A+ F + RG +
Sbjct: 201 PKMMRPMGSARPGPYDRAERFGGGPSRYGMGRGGRNFRGFVEEDGYADFGGSGGGARFSA 260
Query: 441 ----IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ MRGLP+ T + + +FF+ N NV + + G+ +G+ V F
Sbjct: 261 TGHFVHMRGLPFRATERDIFEFFQP--MNPINVH-------LIYEDSGRPSGECDVEFAT 311
Query: 497 EEEADKALSKHKESIGIRYIELFRSTT 523
EEA KA+SK K + RYIELF ++T
Sbjct: 312 HEEAVKAMSKDKAHMQHRYIELFLNST 338
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GVHM + +G+PSGEA+I+++SE + Q RHN ++ RYIEVF+ +M+ V
Sbjct: 43 GVHMTLSREGRPSGEAYIELESEQDMEIGLQ-RHNEHI----GHRYIEVFKSKRSEMDWV 97
Query: 140 L 140
+
Sbjct: 98 V 98
>gi|148667170|gb|EDK99586.1| mCG133010, isoform CRA_c [Mus musculus]
Length = 187
Score = 103 bits (257), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 14/161 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|348560746|ref|XP_003466174.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cavia
porcellus]
Length = 414
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 38 GVAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 98 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 146 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 191
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 7 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIRDGVAGVHFIYTREGRQSGEAFVELE 61
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 62 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 111
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 290 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 340
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 341 VAAMSKDRANMQHRYIELFLNST 363
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 23 IEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 77
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ VL
Sbjct: 78 GHRYIEVFKSHRTEMDWVLK 97
>gi|62510677|sp|Q60HC3.3|HNRPF_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|52782291|dbj|BAD51992.1| heterogeneous nuclear ribonucleoprotein F [Macaca fascicularis]
Length = 415
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF--RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF +T A ++ M+ +S ++ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSSAQATYSGLESQ 395
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|332244100|ref|XP_003271210.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Nomascus leucogenys]
gi|332244102|ref|XP_003271211.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Nomascus leucogenys]
gi|332244104|ref|XP_003271212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Nomascus leucogenys]
Length = 415
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|417400513|gb|JAA47194.1| Putative splicing factor hnrnp-f [Desmodus rotundus]
Length = 414
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ G+ + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGIHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SGCIIHDGVAGIHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSAQSTYSGLESQ 394
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + G+H +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 24 VEDVQNFLSGCIIHDGVAGIHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|4826760|ref|NP_004957.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470397|ref|NP_001091678.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470400|ref|NP_001091677.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470402|ref|NP_001091675.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470404|ref|NP_001091674.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470406|ref|NP_001091676.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|350537293|ref|NP_001233466.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|386781898|ref|NP_001247944.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|297686319|ref|XP_002820702.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Pongo abelii]
gi|297686321|ref|XP_002820703.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Pongo abelii]
gi|297686325|ref|XP_002820705.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Pongo abelii]
gi|297686327|ref|XP_002820706.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Pongo abelii]
gi|297686329|ref|XP_002820707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6
[Pongo abelii]
gi|297686331|ref|XP_002820708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Pongo abelii]
gi|297686333|ref|XP_002820709.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8
[Pongo abelii]
gi|297686337|ref|XP_002820711.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Pongo abelii]
gi|297686339|ref|XP_002820712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Pongo abelii]
gi|297686341|ref|XP_002820713.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Pongo abelii]
gi|297686343|ref|XP_002820714.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Pongo abelii]
gi|297686345|ref|XP_002820715.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 14
[Pongo abelii]
gi|395741477|ref|XP_003777588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Pongo abelii]
gi|395741481|ref|XP_003777589.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Pongo abelii]
gi|397491662|ref|XP_003816768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1 [Pan
paniscus]
gi|397491664|ref|XP_003816769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2 [Pan
paniscus]
gi|397491666|ref|XP_003816770.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3 [Pan
paniscus]
gi|397491668|ref|XP_003816771.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4 [Pan
paniscus]
gi|397491670|ref|XP_003816772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Pan
paniscus]
gi|397491672|ref|XP_003816773.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6 [Pan
paniscus]
gi|397491674|ref|XP_003816774.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7 [Pan
paniscus]
gi|397491676|ref|XP_003816775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8 [Pan
paniscus]
gi|397491678|ref|XP_003816776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 9 [Pan
paniscus]
gi|397491680|ref|XP_003816777.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Pan paniscus]
gi|397491682|ref|XP_003816778.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Pan paniscus]
gi|397491684|ref|XP_003816779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Pan paniscus]
gi|397491686|ref|XP_003816780.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Pan paniscus]
gi|426364503|ref|XP_004049345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Gorilla gorilla gorilla]
gi|426364505|ref|XP_004049346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Gorilla gorilla gorilla]
gi|426364507|ref|XP_004049347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Gorilla gorilla gorilla]
gi|426364509|ref|XP_004049348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Gorilla gorilla gorilla]
gi|1710628|sp|P52597.3|HNRPF_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; AltName: Full=Nucleolin-like protein
mcs94-1; Contains: RecName: Full=Heterogeneous nuclear
ribonucleoprotein F, N-terminally processed
gi|452048|gb|AAC37584.1| HnRNP F protein [Homo sapiens]
gi|12655155|gb|AAH01432.1| Heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|13279032|gb|AAH04254.1| Heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|15990432|gb|AAH15580.1| HNRPF protein [Homo sapiens]
gi|67967777|dbj|BAE00371.1| unnamed protein product [Macaca fascicularis]
gi|76780063|gb|AAI06009.1| HNRPF protein [Homo sapiens]
gi|119607001|gb|EAW86595.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607002|gb|EAW86596.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607003|gb|EAW86597.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607004|gb|EAW86598.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607005|gb|EAW86599.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|123997411|gb|ABM86307.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|157929032|gb|ABW03801.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|168277548|dbj|BAG10752.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|193785530|dbj|BAG50896.1| unnamed protein product [Homo sapiens]
gi|343959614|dbj|BAK63664.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|355562388|gb|EHH18982.1| Heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|355782737|gb|EHH64658.1| Heterogeneous nuclear ribonucleoprotein F [Macaca fascicularis]
gi|380785399|gb|AFE64575.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|384946770|gb|AFI36990.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|410262002|gb|JAA18967.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262004|gb|JAA18968.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262006|gb|JAA18969.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262008|gb|JAA18970.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299574|gb|JAA28387.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299576|gb|JAA28388.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299578|gb|JAA28389.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299580|gb|JAA28390.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299582|gb|JAA28391.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340859|gb|JAA39376.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340861|gb|JAA39377.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340863|gb|JAA39378.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340865|gb|JAA39379.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340867|gb|JAA39380.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340869|gb|JAA39381.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
Length = 415
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|397502356|ref|XP_003821827.1| PREDICTED: epithelial splicing regulatory protein 1 [Pan paniscus]
Length = 268
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 49 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 104
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 105 KDRYVEVFQCSAEEMNFVLMG 125
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLPY T + ++DF E + ++ GV V G+ +GDAF+ + + A
Sbjct: 38 IRLRGLPYAATIEDILDFL---GEFATDIR--THGVHMVLNHQGRPSGDAFIQMKSADRA 92
Query: 501 DKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
A K HK+++ RY+E+F+ + E+ VL
Sbjct: 93 FMAAQKCHKKNMKDRYVEVFQCSAEEMNFVL 123
>gi|291412565|ref|XP_002722547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Oryctolagus cuniculus]
Length = 415
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|62460420|ref|NP_001014860.1| heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|426255584|ref|XP_004021428.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Ovis aries]
gi|426255586|ref|XP_004021429.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Ovis aries]
gi|426255588|ref|XP_004021430.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Ovis aries]
gi|75070041|sp|Q5E9J1.3|HNRPF_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|59858223|gb|AAX08946.1| heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|74355042|gb|AAI02956.1| Heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|296472206|tpg|DAA14321.1| TPA: heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|440903473|gb|ELR54126.1| Heterogeneous nuclear ribonucleoprotein F, partial [Bos grunniens
mutus]
Length = 414
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT +++I FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIIQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSTQSTYSGLESQ 394
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ VL
Sbjct: 79 GHRYIEVFKSHRTEMDWVLK 98
>gi|194042674|ref|XP_001929089.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Sus
scrofa]
gi|335301642|ref|XP_003359253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]
gi|350592730|ref|XP_003483523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]
Length = 414
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIRDGAAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F +EA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHDEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSTQSTYSGLESQ 394
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIRDGAAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ VL
Sbjct: 79 GHRYIEVFKSHRTEMDWVLK 98
>gi|73997922|ref|XP_848697.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Canis lupus familiaris]
gi|73997926|ref|XP_856894.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Canis lupus familiaris]
gi|73997930|ref|XP_856973.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Canis lupus familiaris]
gi|301763831|ref|XP_002917330.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1
[Ailuropoda melanoleuca]
gi|301763833|ref|XP_002917331.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 2
[Ailuropoda melanoleuca]
gi|301763835|ref|XP_002917332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 3
[Ailuropoda melanoleuca]
gi|301763837|ref|XP_002917333.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 4
[Ailuropoda melanoleuca]
gi|410975641|ref|XP_003994239.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Felis catus]
gi|410975643|ref|XP_003994240.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Felis catus]
gi|410975645|ref|XP_003994241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Felis catus]
gi|281338546|gb|EFB14130.1| hypothetical protein PANDA_005550 [Ailuropoda melanoleuca]
Length = 414
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSAQSTYSGLESQ 394
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|19527048|ref|NP_598595.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|25742579|ref|NP_071792.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546815|ref|NP_001032362.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546817|ref|NP_001032363.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546819|ref|NP_001032364.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|261878597|ref|NP_001159899.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878599|ref|NP_001159900.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878601|ref|NP_001159901.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878603|ref|NP_001159902.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878605|ref|NP_001159903.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878607|ref|NP_001159904.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|81911895|sp|Q794E4.3|HNRPF_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|81918016|sp|Q9Z2X1.3|HNRPF_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|4153896|dbj|BAA37095.1| ribonucleoprotein F [Rattus norvegicus]
gi|17390408|gb|AAH18185.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|19343662|gb|AAH25481.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|22137695|gb|AAH29163.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|23274049|gb|AAH33483.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|66911957|gb|AAH97275.1| Heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|73909045|gb|AAI03635.1| Heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|148667168|gb|EDK99584.1| mCG133010, isoform CRA_a [Mus musculus]
gi|149049635|gb|EDM02089.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049636|gb|EDM02090.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049637|gb|EDM02091.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049638|gb|EDM02092.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049639|gb|EDM02093.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049640|gb|EDM02094.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
Length = 415
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
>gi|26345420|dbj|BAC36361.1| unnamed protein product [Mus musculus]
Length = 421
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
>gi|441626116|ref|XP_003265953.2| PREDICTED: G-rich sequence factor 1 [Nomascus leucogenys]
Length = 539
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 237 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 296
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF N++D + FV
Sbjct: 297 SLEVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFFAG-----LNIVD----ITFVMDYR 344
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 345 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 389
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 39/160 (24%)
Query: 444 RGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKA 503
R L Y C + F C + +GE G+ F+ DGK GDA + E E++ KA
Sbjct: 209 RPLGYTCLRLLDVQFKPKQDGLDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKA 268
Query: 504 LSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVP 563
L KH+ +G RY+E++ +V ++ K++E+ S N+G+
Sbjct: 269 LEKHRMYMGQRYVEVYEINNEDVDALM-KSLEV---KSSPVVNDGV-------------- 310
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 311 -----------------VRLRGLPYS--CNEKDIVDFFAG 331
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + +RGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 449 EAADFGTTSSLHFVHVRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 499
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 500 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 531
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H + N G+ G+A I+M+SE A + M G QRY+EV++ + ED++ +
Sbjct: 240 GIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG--QRYVEVYEINNEDVDAL 294
Query: 140 LNGVLPPTSPAIS 152
+ + +SP ++
Sbjct: 295 MKSLEVKSSPVVN 307
>gi|58476100|gb|AAH89313.1| Hnrpf protein [Mus musculus]
Length = 395
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 19 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 78
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 79 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 126
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 127 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 172
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 39/139 (28%)
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ C + DG GV F+ +G+ +G+AFV E E++ AL K +ES+G RYIE+F+S
Sbjct: 12 SDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRT 71
Query: 525 EVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLR 584
E+ VL + NS S+N+G +RLR
Sbjct: 72 EMDWVLKHS----GPNSADSANDGF-------------------------------VRLR 96
Query: 585 GLPYEALCILMDI--FFVG 601
GLP+ C +I FF G
Sbjct: 97 GLPFG--CTKEEIVQFFSG 113
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 4 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 58
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 59 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 87
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 271 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 321
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 322 VAAMSKDRANMQHRYIELFLNST 344
>gi|351714958|gb|EHB17877.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 414
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 38 GVAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 98 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 146 PKGKITGEAFVQFASQELAEKALWKHKERIGHRYIEVFKSSQEEVR 191
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 7 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIRDGVAGVHFIYTREGRQSGEAFVELE 61
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 62 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 111
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 290 VHMRGLPYKATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEEA 340
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 341 VAAMSKDRANMQHRYIELFLNST 363
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + GVH +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 23 IEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 77
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 78 GHRYIEVFKSHRTEMDWVLKHSGPNSA 104
>gi|16876910|gb|AAH16736.1| HNRPF protein [Homo sapiens]
Length = 415
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV +++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFRSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+FRS E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFRSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFRSHRTEMDWVLKHSGPNSADS 107
>gi|149690626|ref|XP_001490069.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1
[Equus caballus]
gi|338717722|ref|XP_003363688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Equus
caballus]
Length = 414
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA + ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFIELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AF+ E
Sbjct: 8 GEGFVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFIELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSAQSTYSGLESQ 394
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAFI+++SE +A L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFIELESEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|344284915|ref|XP_003414210.1| PREDICTED: G-rich sequence factor 1 [Loxodonta africana]
Length = 484
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ Q+ AL +H+ ++ +RY+EV + N ED +
Sbjct: 182 GENGIHFLLNRDGKRRGDALIEMESQQDVQKALGKHRMYMGQRYVEVYEINNEDVDALMK 241
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+A + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 242 SLQVKASPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 289
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 290 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 334
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E +++
Sbjct: 155 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESQQD 209
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ + + N+G+
Sbjct: 210 VQKALGKHRMYMGQRYVEVYEINNEDVDALM-KSLQVKASPVV---NDGV---------- 255
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 256 ---------------------VRLRGLPYS--CNEKDIVDFFAG 276
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+S+ A L +R M G
Sbjct: 167 VEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESQQDVQKA--LGKHR-MYMG- 222
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP ++
Sbjct: 223 -QRYVEVYEINNEDVDALMKSLQVKASPVVN 252
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP++ A+ +I+FF + GKATG+A V F E+
Sbjct: 406 FVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFSTHED 456
Query: 500 ADKALSKHKESIGIRYIELF 519
A A+ K + + RYIELF
Sbjct: 457 AVAAMLKDRSHVHHRYIELF 476
>gi|296196376|ref|XP_002745793.1| PREDICTED: G-rich sequence factor 1 [Callithrix jacchus]
Length = 479
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L + VY I G P + + +LN G G
Sbjct: 128 LPSLPEYELAPSKLGEEVDDVYLIRAQGLPWSCT-------IEDVLNFFSDCRIRNGENG 180
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 240
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
++ + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 241 KSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRRK 288
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 289 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTIEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 250
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 251 ---------------------VRLRGLPYS--CNEKDIVDFFAG 271
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 IEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 247
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAADFGTTPCLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 471
>gi|354495968|ref|XP_003510100.1| PREDICTED: G-rich sequence factor 1-like [Cricetulus griseus]
Length = 457
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 13/162 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED + +
Sbjct: 158 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLH 217
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK- 485
++ + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 218 VKSSPMVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRR 265
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 266 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 307
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 128 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 182
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 183 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL------------------------HV 218
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P ++ G +RLRGLPY C DI FF G
Sbjct: 219 KSSP-------MVNDGV----VRLRGLPYS--CNEKDIVDFFAG 249
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 140 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 195
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 196 -QRYVEVYEINNEDVDALMKSLHVKSSPMVN 225
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP++ A+ +I+FF + GKATG+A V F+ E+
Sbjct: 379 FVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFDTHED 429
Query: 500 ADKALSKHKESIGIRYIELF 519
A A+ K + + RYIELF
Sbjct: 430 AVAAMLKDRSHVQHRYIELF 449
>gi|296220055|ref|XP_002756146.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Callithrix jacchus]
gi|403276785|ref|XP_003930066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Saimiri boliviensis boliviensis]
gi|403276787|ref|XP_003930067.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Saimiri boliviensis boliviensis]
Length = 415
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE LA L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|260834915|ref|XP_002612455.1| hypothetical protein BRAFLDRAFT_136434 [Branchiostoma floridae]
gi|229297832|gb|EEN68464.1| hypothetical protein BRAFLDRAFT_136434 [Branchiostoma floridae]
Length = 411
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 329 YTIPTPGNPV-ALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFI 387
Y + G P A C V+N S G + G GG+ S GR +GEA V
Sbjct: 2 YVVRMRGLPWSATCEEVKNFLTS------EGCKVKGGDGGIHFTFSKEGRPSGEAFVEVE 55
Query: 388 DQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLP 447
E + AL +H H+ RYIEV ++ + V + Q + G I+R+RGLP
Sbjct: 56 TSEDFEKALAKHNQHMGHRYIEVFRSKVSEMEWVV---KHSGQDQVNDG---IVRLRGLP 109
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH 507
+ C+ +++ FF +G E N G+ G++TG+AFV F ++ A+KAL KH
Sbjct: 110 FGCSKEEIAQFF-SGLEIVPN------GITLPTDYQGRSTGEAFVQFTSQDIAEKALGKH 162
Query: 508 KESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
KE IG RYIE+F+S+ EV++ ++ PK L SS G
Sbjct: 163 KEKIGHRYIEIFKSSRNEVRECMS-----PKPRPLMSSRPG 198
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H ++ +G+PSGEAF+++++ + A +HN++M RYIEVF+ +M V
Sbjct: 35 GIHFTFSKEGRPSGEAFVEVETSED-FEKALAKHNQHM----GHRYIEVFRSKVSEMEWV 89
Query: 140 LN 141
+
Sbjct: 90 VK 91
>gi|355693777|gb|AER99447.1| G-rich RNA sequence binding factor 1 [Mustela putorius furo]
Length = 360
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 30/223 (13%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPL--VQNIWLSLLLNTIPGYEQVLGL 365
LP P ++L + VY I G P + C + V N + + G
Sbjct: 10 LPPLPEYELASSKLGEEVDDVYLIRAQGLPWS-CTIEDVVNFFSDCRIRN--------GE 60
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 61 NGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL 120
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+A + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 121 QVKASPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGR 168
Query: 486 -ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 169 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 211
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 32 LIRAQGLPWSCTIEDVVNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 86
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ + + N+G+
Sbjct: 87 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVKASPVV---NDGV---------- 132
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 133 ---------------------VRLRGLPYS--CNEKDIVDFFAG 153
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S N
Sbjct: 271 EAADFGTASSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSN------------- 317
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 318 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 353
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ++ F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 44 IEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 99
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP ++
Sbjct: 100 -QRYVEVYEINNEDVDALMKSLQVKASPVVN 129
>gi|312070749|ref|XP_003138290.1| hypothetical protein LOAG_02705 [Loa loa]
gi|307766549|gb|EFO25783.1| hypothetical protein LOAG_02705 [Loa loa]
Length = 200
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 74/125 (59%), Gaps = 21/125 (16%)
Query: 77 VYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDM 136
++ GVHMVYN+QG PSGEAFIQMDSE SA AA L HN+ M GKKQRYIEVFQCS ED+
Sbjct: 1 MFHGVHMVYNAQGHPSGEAFIQMDSEMSAATAAALAHNKYMQIGKKQRYIEVFQCSAEDI 60
Query: 137 NLVL-NGVLPPT-----------------SPAISPVGKTLLSPGMLPHSSQPLYPQHNTQ 178
NLVL N LPP PAI P L P + P +S +YP Q
Sbjct: 61 NLVLTNPPLPPQFILQPRPLFPQQAVQSLVPAIVPPFTPLYWPCLSPPASPCIYP---LQ 117
Query: 179 INPGL 183
PGL
Sbjct: 118 SQPGL 122
>gi|431914602|gb|ELK15790.1| Heterogeneous nuclear ribonucleoprotein F [Pteropus alecto]
Length = 414
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GATGIHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SGCIIHDGATGIHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSAQSTYSGLESQ 394
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + G+H +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 24 VEDVQNFLSGCIIHDGATGIHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|395851365|ref|XP_003798231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Otolemur
garnettii]
Length = 415
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GG+ + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 38 GPGGIHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF G E N G+
Sbjct: 98 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVLFF-TGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 146 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 191
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 40/166 (24%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F ++C + DG G+ F+ +G+ +G+AFV
Sbjct: 7 GEGFVVKLRGLPWSCSIEDVQNFL-----SNCTIHDGPGGIHFIYTREGRQSGEAFVELG 61
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPM 555
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 62 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF------ 111
Query: 556 LSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
+RLRGLP+ + +FF G
Sbjct: 112 -------------------------VRLRGLPFGCTKEEIVLFFTG 132
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 28/113 (24%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQ 553
A+SK + ++ RYIELF NS T +NNG Q
Sbjct: 342 VAAMSKDRANMQHRYIELFL-------------------NSATGANNGAYGGQ 375
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H +Y +G+ SGEAF+++ SE +A L+ +R + RYIEVF+ +M+ V
Sbjct: 41 GIHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM---GHRYIEVFKSHRTEMDWV 95
Query: 140 LNGVLPPTSPA 150
L P ++ +
Sbjct: 96 LKHSGPNSADS 106
>gi|281347672|gb|EFB23256.1| hypothetical protein PANDA_008197 [Ailuropoda melanoleuca]
Length = 362
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 30/223 (13%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPL--VQNIWLSLLLNTIPGYEQVLGL 365
LP P ++L + VY I G P + C + V N + + G
Sbjct: 11 LPSLPEYELASSKLGEEVDDVYLIRAQGLPWS-CTIEDVVNFFSDCRIRN--------GE 61
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 62 NGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL 121
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++ + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 122 QVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGR 169
Query: 486 -ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 170 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTIEDVVNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S N
Sbjct: 272 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSN------------- 318
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 319 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 354
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ++ F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 IEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
>gi|221041252|dbj|BAH12303.1| unnamed protein product [Homo sapiens]
Length = 448
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 146 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 205
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 206 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 253
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 254 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 298
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 119 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 173
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 174 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 219
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 220 ---------------------VRLRGLPYS--CNEKDIVDFFAG 240
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 358 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 408
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 409 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 440
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 131 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 186
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 187 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 216
>gi|63991866|gb|AAY40942.1| unknown [Homo sapiens]
gi|119626039|gb|EAX05634.1| G-rich RNA sequence binding factor 1, isoform CRA_b [Homo sapiens]
Length = 435
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 178 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 237
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 238 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 285
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 286 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 151 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 205
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 206 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 251
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 252 ---------------------VRLRGLPYS--CNEKDIVDFFAG 272
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 163 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KH--RMYMG- 218
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 219 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 248
>gi|380812104|gb|AFE77927.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
gi|380812106|gb|AFE77928.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
Length = 479
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 177 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 236
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 237 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 284
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 285 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 250
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 251 ---------------------VRLRGLPYS--CNEKDIVDFFAG 271
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 471
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 247
>gi|196010820|ref|XP_002115274.1| hypothetical protein TRIADDRAFT_29141 [Trichoplax adhaerens]
gi|190582045|gb|EDV22119.1| hypothetical protein TRIADDRAFT_29141 [Trichoplax adhaerens]
Length = 339
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ ++ GR +GEA + F E + AL+R++ H+ KRY+EV K+ + V
Sbjct: 35 GRQGIHFTYASDGRASGEAYIEFGSLEDFNRALERNRCHMGKRYVEVFKSKRSEMDYVV- 93
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ R ++ ++R+RGLPYEC+ +++ FF G E N G+ F D
Sbjct: 94 ---KRTKQRSGRDSENVVRLRGLPYECSKEEIAQFF-TGYEIIPN------GITFGVDRD 143
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G++TG+A+V F + +++ALSK KE+IG RYIE+FR+ +++ M PK L
Sbjct: 144 GRSTGEAYVEFANTDVSERALSKDKETIGHRYIEIFRAKKSDIH-----NMSAPKIRPLI 198
Query: 544 SS 545
S
Sbjct: 199 GS 200
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 41/166 (24%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R+RGLP+ T + V FF C V +G +G+ F DG+A+G+A++ F
Sbjct: 6 EFVVRIRGLPWSATVEDVQKFF-----TGCRVKEGRQGIHFTYASDGRASGEAYIEFGSL 60
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
E+ ++AL +++ +G RY+E+F+S +E+ V+ +T + +S
Sbjct: 61 EDFNRALERNRCHMGKRYVEVFKSKRSEMDYVVKRTKQRSGRDS---------------- 104
Query: 558 HLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ 603
++ +RLRGLPYE + FF G +
Sbjct: 105 --------------------ENVVRLRGLPYECSKEEIAQFFTGYE 130
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IRMRGLP++ T +++DFF+ + ++ G+ GKATG+A V F E+A
Sbjct: 261 IRMRGLPFKVTENEIVDFFDQIPLQNIHIEYGD---------GGKATGEAVVEFYNYEDA 311
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+A++K + I RYIELF +TT E +
Sbjct: 312 LEAMNKDRRRIKHRYIELFLNTTPESE 338
>gi|221042436|dbj|BAH12895.1| unnamed protein product [Homo sapiens]
Length = 393
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 91 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 150
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 151 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 198
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 199 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 243
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 64 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 118
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 119 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 164
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 165 ---------------------VRLRGLPYS--CNEKDIVDFFAG 185
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 303 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 353
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 354 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 385
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 76 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 131
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 132 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 161
>gi|148596982|ref|NP_001091946.1| G-rich sequence factor 1 isoform 2 [Mus musculus]
Length = 362
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 11 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCT--VEDV-----LNFFSDCRIRNSENG 63
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 123
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 124 KPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRRK 171
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 172 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 124
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 125 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 154
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 130
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 272 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 354
>gi|332819574|ref|XP_526590.3| PREDICTED: G-rich sequence factor 1 [Pan troglodytes]
Length = 547
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 260 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 319
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 320 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 367
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 368 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 412
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 233 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 287
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 288 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 333
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 334 ---------------------VRLRGLPYS--CNEKDIVDFFAG 354
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 245 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 300
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 301 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 330
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 472 EAADFGTASSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 522
Query: 488 GDAFVLFEKEEEADKALSKHKESI 511
G+A V FE E+A A+ K + +
Sbjct: 523 GEADVHFETHEDAVAAMLKDRSHV 546
>gi|388452478|ref|NP_001253931.1| G-rich sequence factor 1 [Macaca mulatta]
gi|383417775|gb|AFH32101.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
Length = 479
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 177 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 236
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 237 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 284
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 285 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 250
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 251 ---------------------VRLRGLPYS--CNEKDIVDFFAG 271
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 471
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 247
>gi|215274142|sp|Q12849.3|GRSF1_HUMAN RecName: Full=G-rich sequence factor 1; Short=GRSF-1
Length = 480
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 178 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 237
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 238 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 285
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 286 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 151 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 205
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 206 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 251
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 252 ---------------------VRLRGLPYS--CNEKDIVDFFAG 272
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 390 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 440
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 441 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 472
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 163 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 218
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 219 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 248
>gi|410227596|gb|JAA11017.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410268188|gb|JAA22060.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410306352|gb|JAA31776.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410306354|gb|JAA31777.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410360388|gb|JAA44703.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410360390|gb|JAA44704.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
Length = 481
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 179 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 238
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 239 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 286
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 287 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 331
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 152 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 206
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 207 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 252
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 253 ---------------------VRLRGLPYS--CNEKDIVDFFAG 273
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 391 EAADFGTASSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 441
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 442 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 473
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 164 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 219
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 220 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 249
>gi|426344574|ref|XP_004038836.1| PREDICTED: G-rich sequence factor 1 [Gorilla gorilla gorilla]
Length = 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 272 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + I RYIELF
Sbjct: 323 GEADVHFETHEDAVAAMLKDRSHIHHRYIELF 354
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
>gi|327274272|ref|XP_003221902.1| PREDICTED: g-rich sequence factor 1-like [Anolis carolinensis]
Length = 485
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 13/177 (7%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT 411
+LN G + G+ G+ L+ G+R G+A+V ++ AL++H+ ++ +RY+EV
Sbjct: 169 VLNFFAGSKIRNGVNGIHFLLNRDGKRRGDALVELESEQDVHNALEKHRRYLGQRYVEVF 228
Query: 412 KANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
+ + ED + + + + G ++R+RGLPY CT + DFF + +++D
Sbjct: 229 EIHNEDVDAIMKSLQSSSTSVTNDG---VVRLRGLPYSCTEVDISDFF-----SGLSIID 280
Query: 472 GEEGVLFVKKPDGK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+ FV G+ TG+AFV F E A++AL KHKE IG RYIE+F S +E++
Sbjct: 281 ----ITFVMDQRGRRKTGEAFVQFATPEMANQALLKHKEEIGNRYIEIFPSQRSEIR 333
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 40/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLPY CT + V++FF AG++ + +G G+ F+ DGK GDA V E E++
Sbjct: 154 LIRAQGLPYSCTEEDVLNFF-AGSK----IRNGVNGIHFLLNRDGKRRGDALVELESEQD 208
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
AL KH+ +G RY+E+F +V ++ SL SS+
Sbjct: 209 VHNALEKHRRYLGQRYVEVFEIHNEDVDAIM---------KSLQSSS------------- 246
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
TS T +RLRGLPY + + FF G
Sbjct: 247 -------------TSVTNDGVVRLRGLPYSCTEVDISDFFSG 275
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 63/209 (30%)
Query: 363 LGLGGVALCLSAFGRRN-GEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----------- 410
L + + + GRR GEA V+F E + AL +HK I RYIE+
Sbjct: 276 LSIIDITFVMDQRGRRKTGEAFVQFATPEMANQALLKHKEEIGNRYIEIFPSQRSEIRTH 335
Query: 411 --------------TKANGEDFINVAGGNNNEA-----------------QAFLT-RGAQ 438
TK + + N G+ NEA QAF R Q
Sbjct: 336 NGFFRGKKMMGFPTTKQDSDSVFNE--GDFNEALRPVAAYENAKEHELFKQAFERPRDLQ 393
Query: 439 V--------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
+ +RGLP++ TA+ +I+FF A + M+ GKATG+A
Sbjct: 394 ESRSFPSLHFVHLRGLPFQATAQDIINFF-APLKPVRITME--------YNSSGKATGEA 444
Query: 491 FVLFEKEEEADKALSKHKESIGIRYIELF 519
V FE E+A A++K++ + RYIELF
Sbjct: 445 DVHFETHEDAIAAMAKNRSHVQHRYIELF 473
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E +L F G+H + N G+ G+A ++++SE + A + +H R +
Sbjct: 167 EDVLNFFAGSKIRNGVNGIHFLLNRDGKRRGDALVELESEQDVHNALE-KHRRYL----G 221
Query: 123 QRYIEVFQCSGEDMNLVLNGV 143
QRY+EVF+ ED++ ++ +
Sbjct: 222 QRYVEVFEIHNEDVDAIMKSL 242
>gi|301768278|ref|XP_002919563.1| PREDICTED: g-rich sequence factor 1-like [Ailuropoda melanoleuca]
Length = 717
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L + VY I G P + C + ++N G G
Sbjct: 366 LPSLPEYELASSKLGEEVDDVYLIRAQGLPWS-CTIED------VVNFFSDCRIRNGENG 418
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 419 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 478
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
++ + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 479 KSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRRK 526
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 527 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 567
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 388 LIRAQGLPWSCTIEDVVNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 442
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ + + N+G+
Sbjct: 443 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVKSSPVV---NDGV---------- 488
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 489 ---------------------VRLRGLPYS--CNEKDIVDFFAG 509
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S N
Sbjct: 627 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSN------------- 673
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 674 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 709
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ++ F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 400 IEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 455
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAI 151
QRY+EV++ + ED++ ++ + +SP +
Sbjct: 456 -QRYVEVYEINNEDVDALMKSLQVKSSPVV 484
>gi|221040122|dbj|BAH11824.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 272 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 354
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
>gi|149193321|ref|NP_002083.3| G-rich sequence factor 1 isoform 1 [Homo sapiens]
Length = 480
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 178 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 237
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 238 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 285
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 286 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 151 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 205
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 206 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 251
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 252 ---------------------VRLRGLPYS--CNEKDIVDFFAG 272
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 390 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 440
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 441 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 472
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 163 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 218
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 219 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 248
>gi|193784859|dbj|BAG54012.1| unnamed protein product [Homo sapiens]
Length = 459
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 157 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 216
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 217 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 264
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 265 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 309
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 130 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 184
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 185 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 230
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 231 ---------------------VRLRGLPYS--CNEKDIVDFFAG 251
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 369 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 419
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 420 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 451
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 142 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 197
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 198 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 227
>gi|517196|gb|AAC95399.1| G-rich sequence factor-1 [Homo sapiens]
Length = 424
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 122 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 181
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 182 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 229
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 230 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 274
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 95 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 149
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 150 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 195
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 196 ---------------------VRLRGLPYS--CNEKDIVDFFAG 216
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 334 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 384
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 385 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 416
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 107 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 162
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 163 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 192
>gi|21748975|dbj|BAC03513.1| unnamed protein product [Homo sapiens]
Length = 415
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 113 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 172
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 173 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 220
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 221 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 265
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 86 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 140
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 141 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 186
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 187 ---------------------VRLRGLPYS--CNEKDIVDFFAG 207
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 325 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 375
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 376 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 407
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 98 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 153
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 154 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 183
>gi|431900090|gb|ELK08023.1| G-rich sequence factor 1 [Pteropus alecto]
Length = 380
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 73 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 132
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 133 NLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDFR 180
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 181 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 225
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 46 LIRAQGLPWSCTVEDVLSFF-----SDCRIHNGENGIHFLLNRDGKRRGDALIEMESEQD 100
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ KN + SS
Sbjct: 101 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-------KNLQVKSS-------------- 139
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
PV + G +RLRGLPY C DI FF G
Sbjct: 140 ---PV-------VNDG----VVRLRGLPYS--CNEKDIVDFFAG 167
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 58 VEDVLSFFSDCRIHNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 113
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 114 -QRYVEVYEINNEDVDALMKNLQVKSSPVVN 143
>gi|355687360|gb|EHH25944.1| G-rich sequence factor 1, partial [Macaca mulatta]
Length = 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 272 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 354
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
>gi|148673403|gb|EDL05350.1| G-rich RNA sequence binding factor 1, isoform CRA_b [Mus musculus]
Length = 403
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 52 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCT--VEDV-----LNFFSDCRIRNSENG 104
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 105 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 164
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 165 KPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRRK 212
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 213 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 253
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 74 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 128
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 129 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 165
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 166 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 195
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 86 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 141
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 142 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 171
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 313 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 363
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 364 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 395
>gi|397475207|ref|XP_003809035.1| PREDICTED: G-rich sequence factor 1 [Pan paniscus]
Length = 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 272 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 354
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
>gi|355749346|gb|EHH53745.1| hypothetical protein EGM_14439, partial [Macaca fascicularis]
Length = 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T +Q + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 272 EAADFGTTSSQHFVHMRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 354
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
>gi|126330654|ref|XP_001364439.1| PREDICTED: g-rich sequence factor 1 isoform 1 [Monodelphis
domestica]
Length = 478
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A+V ++ AL++H ++ +RY+EV + N ED +
Sbjct: 177 GENGIHFLLNRDGKRRGDALVEMESEQDVKKALEKHHLYMGQRYVEVYEINNEDVDALMK 236
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 237 SLQAKSNPAVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIID----ITFVMDHR 284
Query: 484 G-KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G K TG+A+V FE+ E A++AL KHKE IG RYIE+F S EV+
Sbjct: 285 GRKKTGEAYVQFEEPEMANQALLKHKEEIGNRYIEIFPSRRNEVR 329
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF C + +GE G+ F+ DGK GDA V E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLKFF-----FDCRIRNGENGIHFLLNRDGKRRGDALVEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH +G RY+E++ +V ++ K+++ N ++ N+G+
Sbjct: 205 VKKALEKHHLYMGQRYVEVYEINNEDVDALM-KSLQAKSNPAV---NDGV---------- 250
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 251 ---------------------VRLRGLPYS--CNEKDIVDFFAG 271
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L+F + G+H + N G+ G+A ++M+SE A + H + G
Sbjct: 162 VEDVLKFFFDCRIRNGENGIHFLLNRDGKRRGDALVEMESEQDVKKALEKHH---LYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++PA++
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQAKSNPAVN 247
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +++FF + GKAT
Sbjct: 388 EAADFGTMPSLHFVHMRGLPFQANAQDIVNFFAPLKPVR---------ITMEYSSSGKAT 438
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 439 GEADVHFETHEDAVAAMGKDRSHVQHRYIELF 470
>gi|26337751|dbj|BAC32561.1| unnamed protein product [Mus musculus]
Length = 479
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 128 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSC--TVEDV-----LNFFSDCRIRNSENG 180
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 240
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 241 KPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRRK 288
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 289 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 241
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 242 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 271
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 247
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 471
>gi|291401649|ref|XP_002717080.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like, partial
[Oryctolagus cuniculus]
Length = 482
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 180 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 239
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 240 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 287
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 288 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 332
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 153 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 207
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 208 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 253
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 254 ---------------------VRLRGLPYS--CNEKDIVDFFAG 274
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 165 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 220
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 221 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 250
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP++ A+ +I+FF + GKATG+A V FE E+
Sbjct: 404 FVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFETHED 454
Query: 500 ADKALSKHKESIGIRYIELF 519
A A+ K + + RYIELF
Sbjct: 455 AVAAMLKDRSHVHHRYIELF 474
>gi|148673402|gb|EDL05349.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Mus musculus]
Length = 429
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 78 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSC--TVEDV-----LNFFSDCRIRNSENG 130
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 131 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 190
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 191 KPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRRK 238
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 239 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 279
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 100 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 154
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 155 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 191
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 192 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 221
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 112 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 167
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 168 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 197
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 339 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 389
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 390 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 421
>gi|148596934|ref|NP_848815.2| G-rich sequence factor 1 isoform 1 [Mus musculus]
gi|55976518|sp|Q8C5Q4.2|GRSF1_MOUSE RecName: Full=G-rich sequence factor 1; Short=GRSF-1
gi|26336891|dbj|BAC32129.1| unnamed protein product [Mus musculus]
gi|182888413|gb|AAI60216.1| G-rich RNA sequence binding factor 1 [synthetic construct]
Length = 479
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 128 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCT--VEDV-----LNFFSDCRIRNSENG 180
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 240
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 241 KPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRRK 288
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 289 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 241
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 242 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 271
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 247
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 471
>gi|159469283|ref|XP_001692797.1| splicing factor [Chlamydomonas reinhardtii]
gi|158278050|gb|EDP03816.1| splicing factor [Chlamydomonas reinhardtii]
Length = 647
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 376 GRRNGEAIVRFID-QEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR GE V+ D K H+ + RYIEV ++ D + + + F
Sbjct: 61 GRSTGEGYVQLDSVAAAADAIAKLHRQTLGHRYIEVFESTEADLATAKSLSVDRMRGF-- 118
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
+IR RGLPY TA+ V++FF A ++ G EGV+F PDG+ TG+AFV
Sbjct: 119 -----VIRCRGLPYTSTAQDVLNFFGA----DVPIVRGIEGVVFTYAPDGRPTGEAFVEL 169
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ EE +AL KHKES+G RYIELF ST ++ Q + +
Sbjct: 170 QTEEAQREALKKHKESLGSRYIELFVSTKVDMIQAIQQ 207
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ V FF D E + + K G++TG+ +V +
Sbjct: 26 TVLRLRGLPFSAGEDDVRQFF----------ADFEVATVVIGKRAGRSTGEGYVQLDSVA 75
Query: 499 EADKALSK-HKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL---SAQQP 554
A A++K H++++G RYIE+F ST A++ K++ + + GL S Q
Sbjct: 76 AAADAIAKLHRQTLGHRYIEVFESTEADLATA--KSLSVDRMRGFVIRCRGLPYTSTAQD 133
Query: 555 MLSHL-AQVPV 564
+L+ A VP+
Sbjct: 134 VLNFFGADVPI 144
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
V G+ GV + GR GEA V +E + ALK+HK + RYIE+ + D I
Sbjct: 145 VRGIEGVVFTYAPDGRPTGEAFVELQTEEAQREALKKHKESLGSRYIELFVSTKVDMIQA 204
>gi|45387779|ref|NP_991247.1| heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
gi|41107558|gb|AAH65439.1| Heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
Length = 403
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 115/239 (48%), Gaps = 29/239 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV---AGGNNNEAQAF 432
GR +GEA V F +E +A+K+ + + RY+EV K+N + V G N E
Sbjct: 47 GRPSGEAFVEFESEEDLKIAVKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNCPET--- 103
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
G ++R+RGLP+ C+ ++++ FF AG E N G+ G++TG+AFV
Sbjct: 104 ---GGDGLVRLRGLPFGCSKEEIVQFF-AGLEIVPN------GITLPVDFQGRSTGEAFV 153
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ---QVLNKTMELPK---------NN 540
F ++ A+KAL KHKE IG RYIE+F+S+ AEV+ + K M + +
Sbjct: 154 QFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQRKVMGMQRPSPYDRPGGGR 213
Query: 541 SLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
S G+S ++ S T C+ +RGLPY A + FF
Sbjct: 214 GYNSMGRGVSFERMRRGGYGGDGRYGDSGSSFQS-TTGHCVHMRGLPYRATETDIYNFF 271
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+ G ++R+RGLP+ C+ +V FF + C + + F +G+ +G+AFV
Sbjct: 1 MADGEGFVVRVRGLPWSCSVDEVQRFF-----SECKIASNGTSIHFTYTREGRPSGEAFV 55
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
FE EE+ A+ K +E++G RY+E+F+S + E+ VL T
Sbjct: 56 EFESEEDLKIAVKKDRETMGHRYVEVFKSNSVEMDWVLKHT 96
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN------------ 414
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 136 GITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQR 195
Query: 415 ----------------GEDFINVAGGNNNE----------------AQAFLTRGAQVIIR 442
G + ++ G + E +F + +
Sbjct: 196 KVMGMQRPSPYDRPGGGRGYNSMGRGVSFERMRRGGYGGDGRYGDSGSSFQSTTGHCV-H 254
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 255 MRGLPYRATETDIYNFFSPLNPVRVHLEIG---------PDGRVTGEADVEFATHEDAVA 305
Query: 503 ALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 306 AMSKDKANMQHRYVELFLNSTA 327
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 62 VEHILEFLGE--FASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ + F E ASN +H Y +G+PSGEAF++ +SE +A ++ +R +
Sbjct: 20 VDEVQRFFSECKIASNGT--SIHFTYTREGRPSGEAFVEFESEEDLKIA--VKKDRETM- 74
Query: 120 GKKQRYIEVFQCSGEDMNLVLNGVLP 145
RY+EVF+ + +M+ VL P
Sbjct: 75 --GHRYVEVFKSNSVEMDWVLKHTGP 98
>gi|193786243|dbj|BAG51526.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 110 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 169
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 170 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 217
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 218 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 262
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 83 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 137
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 138 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 183
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 184 ---------------------VRLRGLPYS--CNEKDIVDFFAG 204
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 322 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 372
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 373 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 404
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 95 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 150
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 151 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 180
>gi|410957462|ref|XP_003985346.1| PREDICTED: G-rich sequence factor 1 [Felis catus]
Length = 361
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 30/223 (13%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPL--VQNIWLSLLLNTIPGYEQVLGL 365
LP P ++L + VY I G P + C + V N + + G
Sbjct: 11 LPPLPEYELASSKLGEEVDDVYLIRAQGLPWS-CTIEDVVNFFSDCRIRN--------GE 61
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 62 NGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL 121
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++ + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 122 QVKSSPAVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGR 169
Query: 486 -ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 170 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTIEDVVNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S + N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPAVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ++ F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 IEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SPA++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPAVN 130
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S N
Sbjct: 271 EAVDFGTPSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSN------------- 317
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 318 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 353
>gi|402869627|ref|XP_003898853.1| PREDICTED: G-rich sequence factor 1 [Papio anubis]
Length = 606
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 279 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 338
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG +++D + FV
Sbjct: 339 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----HIVD----ITFVMDYR 386
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 387 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 431
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 252 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 306
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 307 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 352
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 353 ---------------------VRLRGLPYS--CNEKDIVDFFAG 373
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 264 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 319
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 320 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 349
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 67/189 (35%), Gaps = 60/189 (31%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYI--------EVTKANG------------- 415
R+ GEA V+F + E + AL +H+ I RYI EV G
Sbjct: 389 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHKGKKIASSPTA 448
Query: 416 ----------------EDFINVAGGNNN--------------EAQAFLTRGAQVIIRMRG 445
ED + N EA F T + + MRG
Sbjct: 449 KYITEPEMVFEEHEVNEDIRPMTAFENEKEIELPKEVPEKLPEAADFGTMSSLHFVHMRG 508
Query: 446 LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALS 505
LP++ A+ +I+FF + GKATG+A V FE E+A A+
Sbjct: 509 LPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFETHEDAVAAML 559
Query: 506 KHKESIGIR 514
K + + R
Sbjct: 560 KDRSHVHHR 568
>gi|10177116|dbj|BAB10406.1| unnamed protein product [Arabidopsis thaliana]
Length = 248
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 30/225 (13%)
Query: 321 QLNQTPTVYTIPTPGNPVALC---PLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFG 376
Q N V T PT P P+V+ L I +E GL V L +S G
Sbjct: 18 QSNPYLAVGTGPTSFPPFGYAGGFPVVRLRGLPFNCADIDIFEFFAGLNIVDVLLVSKNG 77
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN---------- 426
+ +GEA V F ++AL+R +H++ +RY+EV + + +D+ N
Sbjct: 78 KFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAYEYEVRAS 137
Query: 427 ------NEAQAFLTRGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
+ A+ F + +++MRGLPY Q+I+FF + V+ G V
Sbjct: 138 PPPTGPSRAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFF-----SGYKVIQGR--VQ 190
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
V +PDGKATG+AFV FE EEA +A++K K SIG RY+ELF +T
Sbjct: 191 VVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELFPTT 235
>gi|73975377|ref|XP_532402.2| PREDICTED: G-rich sequence factor 1 [Canis lupus familiaris]
Length = 372
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 70 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 129
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 130 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 177
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 178 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 222
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 43 LIRAQGLPWSCTIEDVVNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 97
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 98 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 143
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 144 ---------------------VRLRGLPYS--CNEKDIVDFFAG 164
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ++ F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 55 IEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 110
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 111 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 140
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F + + MRGLP++ A+ +I+FF E S N
Sbjct: 282 EAVDFGATSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSN------------- 328
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 329 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 364
>gi|193643553|ref|XP_001946497.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Acyrthosiphon pisum]
Length = 518
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV L ++ GR +GEA V +E ALK+ + H+ RYIEV ++ + V
Sbjct: 86 GAAGVHLTMAREGRPSGEAYVEMESEEDLKAALKKDREHMGNRYIEVFRSKRSEMEWVIK 145
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + L +R+RGLP+ T ++ FF+ G E + +G+
Sbjct: 146 KTGSTLDSVLD---DNCVRLRGLPFGSTKDDIVQFFQ-GLEMTP------DGITIATDFT 195
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F E A+KAL KHKE IG RYIE+FRS+ AE++
Sbjct: 196 GRSTGEAFVQFVDRENAEKALQKHKEKIGHRYIEIFRSSLAEIR 239
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 37/162 (22%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++MRGLP+ TA +I F E V DG GV +G+ +G+A+V E EE+
Sbjct: 56 VVKMRGLPWSATADDIIKFLSILGE--AKVKDGAAGVHLTMAREGRPSGEAYVEMESEED 113
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
AL K +E +G RYIE+FRS +E++ V+ KT
Sbjct: 114 LKAALKKDREHMGNRYIEVFRSKRSEMEWVIKKT-------------------------- 147
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
+ S +C+RLRGLP+ + + FF G
Sbjct: 148 ---------GSTLDSVLDDNCVRLRGLPFGSTKDDIVQFFQG 180
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 65 ILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQR 124
L LGE GVH+ +G+PSGEA+++M+SE L A L+ +R + R
Sbjct: 74 FLSILGEAKVKDGAAGVHLTMAREGRPSGEAYVEMESEED--LKAALKKDREHM---GNR 128
Query: 125 YIEVFQCSGEDMNLVL 140
YIEVF+ +M V+
Sbjct: 129 YIEVFRSKRSEMEWVI 144
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ MRGLP++ + FFE +D + + + + +G+A V F +E+
Sbjct: 346 VVHMRGLPFKANEDDIATFFEP-----LEPVD----IRILFNNNNRPSGEANVEFGNKED 396
Query: 500 ADKALSKHKESIGIRYIELF 519
A +A+SK K + RYIELF
Sbjct: 397 AMRAMSKDKTYMQHRYIELF 416
>gi|297797787|ref|XP_002866778.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297312613|gb|EFH43037.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 255
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 26/172 (15%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA----GGN 425
L +S G+ +GEA V F +++L+R +H++ +RY+EV + + +D+ N G
Sbjct: 78 LLVSKNGKFSGEAFVVFAGPMQVEISLQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAY 137
Query: 426 NNEAQA-----FLTRGAQV----------IIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
EA+A +R + +++MRGLPY Q+I+FF + V+
Sbjct: 138 EYEARASPPPTVPSRAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFF-----SGYKVI 192
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
+G V V +PDGKATG+AFV FE EEA +A++K K SIG RY+ELF +T
Sbjct: 193 EGR--VQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELFPTT 242
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 35/155 (22%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C + FF + +++D VL V K +GK +G+AFV+F +
Sbjct: 50 VVRLRGLPFNCADIDIFKFF-----SGLDIVD----VLLVSK-NGKFSGEAFVVFAGPMQ 99
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ +L + + ++G RY+E+FR + + N ++A++ +
Sbjct: 100 VEISLQRDRHNMGRRYVEVFRCSKQDYY-------------------NAVAAEEGAYEYE 140
Query: 560 AQV-PVPYLPQHIITSGTRK-----DCIRLRGLPY 588
A+ P P +P ++ + +++RGLPY
Sbjct: 141 ARASPPPTVPSRAKRFSEKEKLEYTEVLKMRGLPY 175
>gi|338723562|ref|XP_001489151.2| PREDICTED: g-rich sequence factor 1 [Equus caballus]
Length = 362
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 314 LPKFPV--HQLNQ-TPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVAL 370
LP++ V +L Q VY I G P + C + +LN G G+
Sbjct: 14 LPEYEVAPSKLGQDVDDVYLIRAQGLPWS-CTIED------VLNFFSDCRIRNGENGIHF 66
Query: 371 CLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQ 430
L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED + ++
Sbjct: 67 LLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSS 126
Query: 431 AFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-ATGD 489
+ G ++R+RGLPY C K ++DFF AG N++D + FV G+ TG+
Sbjct: 127 PVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRRKTGE 174
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 175 AYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTIEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 133
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 ---------------------VRLRGLPYS--CNEKDIVDFFAG 154
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 IEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
E F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 272 ETADFGTASSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 318
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 319 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 354
>gi|349603147|gb|AEP99067.1| G-rich sequence factor 1-like protein, partial [Equus caballus]
Length = 361
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 314 LPKFPV--HQLNQ-TPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVAL 370
LP++ V +L Q VY I G P + C + +LN G G+
Sbjct: 13 LPEYEVAPSKLGQDVDDVYLIRAQGLPWS-CTIED------VLNFFSDCRIRNGENGIHF 65
Query: 371 CLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQ 430
L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED + ++
Sbjct: 66 LLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSS 125
Query: 431 AFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-ATGD 489
+ G ++R+RGLPY C K ++DFF AG N++D + FV G+ TG+
Sbjct: 126 PVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRRKTGE 173
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 174 AYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 211
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 32 LIRAQGLPWSCTIEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 86
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 87 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 132
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 133 ---------------------VRLRGLPYS--CNEKDIVDFFAG 153
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 44 IEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 99
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 100 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 129
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
E F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 271 ETADFGTASSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 317
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 318 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 353
>gi|26354144|dbj|BAC40702.1| unnamed protein product [Mus musculus]
Length = 344
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 13/162 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 45 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQ 104
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK- 485
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 105 VKPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRR 152
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 153 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 194
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 15 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 69
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 70 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 106
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 107 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 136
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 27 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 82
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 83 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 112
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 254 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 300
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 301 --GKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 336
>gi|145359708|ref|NP_201402.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332010757|gb|AED98140.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 255
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 30/225 (13%)
Query: 321 QLNQTPTVYTIPTPGNPVALC---PLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFG 376
Q N V T PT P P+V+ L I +E GL V L +S G
Sbjct: 25 QSNPYLAVGTGPTSFPPFGYAGGFPVVRLRGLPFNCADIDIFEFFAGLNIVDVLLVSKNG 84
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN---------- 426
+ +GEA V F ++AL+R +H++ +RY+EV + + +D+ N
Sbjct: 85 KFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAYEYEVRAS 144
Query: 427 ------NEAQAFLTRGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
+ A+ F + +++MRGLPY Q+I+FF + V+ G V
Sbjct: 145 PPPTGPSRAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFF-----SGYKVIQGR--VQ 197
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
V +PDGKATG+AFV FE EEA +A++K K SIG RY+ELF +T
Sbjct: 198 VVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELFPTT 242
>gi|432960846|ref|XP_004086494.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 370
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 43/284 (15%)
Query: 312 QVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALC 371
+ P P + ++ V+ + G P + C + + LL+ G GV L
Sbjct: 55 EAYPPLPAYDQQESREVFIVQVRGLPWS-CTVHE------LLHFFSDCRIRDGERGVHLT 107
Query: 372 LSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQA 431
L GR +G A + +E AL++H+ ++ RY+EV++ N++A+
Sbjct: 108 LDRLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVSEVT-----------NSDAET 156
Query: 432 FLTRGA-----QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
L A ++ +RGLP+ CT ++ FF + +V+ E G+ V G+
Sbjct: 157 ILQHVAPPAAEDGVVMLRGLPFSCTQDDILLFF-----SGLDVV--ENGITMVTDGRGRN 209
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSN 546
+G+AFV F +E A KAL KH+E +G RY+E+F S ++E++ + LP ++ +
Sbjct: 210 SGEAFVQFTSQEVAGKALQKHRELMGHRYVEVFPSRSSEIRSTWKRRSSLPPQSASPPAG 269
Query: 547 NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
SA +S PQ +S I +RGLP++A
Sbjct: 270 RPASAPHRAVS----------PQ---SSEANSHFIHMRGLPFQA 300
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
G+ + GR +GEA V+F QE AL++H+ + RY+EV + + +
Sbjct: 198 GITMVTDGRGRNSGEAFVQFTSQEVAGKALQKHRELMGHRYVEVFPSRSSEIRSTWKRRS 257
Query: 422 --------------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSC 467
A + + I MRGLP++ + + ++ FF +
Sbjct: 258 SLPPQSASPPAGRPASAPHRAVSPQSSEANSHFIHMRGLPFQASGEDIVKFFSPYVVSK- 316
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++ +PDG+ +G+A V F +A A+S+ + ++G RYIELF ++ +
Sbjct: 317 --------IMIECRPDGRTSGEADVYFSCHRDAVAAMSRDRTNMGHRYIELFLNSAPDSD 368
Query: 528 QV 529
Q
Sbjct: 369 QC 370
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V +L F + +GVH+ + G+PSG AFI+M EH ++ L +R +
Sbjct: 85 VHELLHFFSDCRIRDGERGVHLTLDRLGRPSGRAFIEM--EHEEDVSKALEKHRQYL--- 139
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RY+EV + + D +L V PP +
Sbjct: 140 GPRYVEVSEVTNSDAETILQHVAPPAA 166
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
++V G+ MV + +G+ SGEAF+Q S+ A A Q +H M RY+EVF
Sbjct: 193 DVVENGITMVTDGRGRNSGEAFVQFTSQEVAGKALQ-KHRELM----GHRYVEVFPSRSS 247
Query: 135 DMNLVL--NGVLPPTSPAISPVGKTLLSP--GMLPHSSQ 169
++ LPP S A P G+ +P + P SS+
Sbjct: 248 EIRSTWKRRSSLPPQS-ASPPAGRPASAPHRAVSPQSSE 285
>gi|149193319|ref|NP_001091947.1| G-rich sequence factor 1 isoform 2 [Homo sapiens]
gi|119626036|gb|EAX05631.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|119626037|gb|EAX05632.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|119626038|gb|EAX05633.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|193786999|dbj|BAG51822.1| unnamed protein product [Homo sapiens]
gi|193787731|dbj|BAG52934.1| unnamed protein product [Homo sapiens]
gi|193788237|dbj|BAG53131.1| unnamed protein product [Homo sapiens]
gi|193788520|dbj|BAG53414.1| unnamed protein product [Homo sapiens]
Length = 318
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 16 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 75
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 76 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 123
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 124 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 168
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 44/151 (29%)
Query: 453 KQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
+ V++FF + C + +GE G+ F+ DGK GDA + E E++ KAL KH+ +G
Sbjct: 2 EDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMG 56
Query: 513 IRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHII 572
RY+E++ +V ++ K++++ S N+G+
Sbjct: 57 QRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV----------------------- 89
Query: 573 TSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 90 --------VRLRGLPYS--CNEKDIVDFFAG 110
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 228 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITME--------YSSSGKAT 278
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 279 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 310
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 1 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 56
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 57 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 86
>gi|395541913|ref|XP_003772881.1| PREDICTED: G-rich sequence factor 1 [Sarcophilus harrisii]
Length = 441
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A+V ++ AL++H ++ +RY+EV + N ED +
Sbjct: 140 GEHGIHFLLNRDGKRRGDALVELESEQDVKKALEKHHLYMGQRYVEVYEINNEDVDALMK 199
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 200 SLQAKSNPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDHR 247
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KHKE IG RYIE+F S EV+
Sbjct: 248 GRRKTGEAYVQFEEPEMANQALLKHKEEIGNRYIEIFPSRRNEVR 292
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA V E E++
Sbjct: 113 LIRAQGLPWSCTVEDVLKFF-----SDCRIRNGEHGIHFLLNRDGKRRGDALVELESEQD 167
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH +G RY+E++ +V ++ SL + +N
Sbjct: 168 VKKALEKHHLYMGQRYVEVYEINNEDVDALM---------KSLQAKSN------------ 206
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
PV + G +RLRGLPY C DI FF G
Sbjct: 207 ---PV-------VNDGV----VRLRGLPYS--CNEKDIVDFFAG 234
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 351 EAADFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 401
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+SK + + RYIELF
Sbjct: 402 GEADVHFETHEDAIAAMSKDRSHVQHRYIELF 433
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L+F + G+H + N G+ G+A ++++SE A + H + G
Sbjct: 125 VEDVLKFFSDCRIRNGEHGIHFLLNRDGKRRGDALVELESEQDVKKALEKHH---LYMG- 180
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 181 -QRYVEVYEINNEDVDALMKSLQAKSNPVVN 210
>gi|90084329|dbj|BAE91006.1| unnamed protein product [Macaca fascicularis]
Length = 318
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 16 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 75
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 76 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 123
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 124 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 168
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 44/151 (29%)
Query: 453 KQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
+ V++FF + C + +GE G+ F+ DGK GDA + E E++ KAL KH+ +G
Sbjct: 2 EDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMG 56
Query: 513 IRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHII 572
RY+E++ +V ++ K++++ S N+G+
Sbjct: 57 QRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV----------------------- 89
Query: 573 TSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 90 --------VRLRGLPYS--CNEKDIVDFFAG 110
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 228 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 274
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V FE E+A A+ K + + RYIELF
Sbjct: 275 --GKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELF 310
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 1 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 56
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 57 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 86
>gi|118151012|ref|NP_001071439.1| G-rich sequence factor 1 [Bos taurus]
gi|117306552|gb|AAI26704.1| G-rich RNA sequence binding factor 1 [Bos taurus]
Length = 481
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 179 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 238
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 239 SLHVKSAPMVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 286
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 287 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 331
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 152 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 206
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 207 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL------------------------HV 242
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P ++ G +RLRGLPY C DI FF G
Sbjct: 243 KSAP-------MVNDGV----VRLRGLPYS--CNEKDIVDFFAG 273
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 391 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 441
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 442 GEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 473
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 164 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 219
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 220 -QRYVEVYEINNEDVDALMKSLHVKSAPMVN 249
>gi|296486434|tpg|DAA28547.1| TPA: G-rich RNA sequence binding factor 1 [Bos taurus]
Length = 406
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 179 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 238
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 239 SLHVKSAPMVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 286
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 287 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 331
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 152 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 206
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 207 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL------------------------HV 242
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P ++ G +RLRGLPY C DI FF G
Sbjct: 243 KSAP-------MVNDGV----VRLRGLPYS--CNEKDIVDFFAG 273
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 164 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 219
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 220 -QRYVEVYEINNEDVDALMKSLHVKSAPMVN 249
>gi|281427145|ref|NP_001094360.1| G-rich RNA sequence binding factor 1 [Rattus norvegicus]
Length = 479
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 13/162 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 180 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQ 239
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK- 485
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 240 VKPTPALSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRR 287
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 288 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 241
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P P L + +RLRGLPY C DI FF G
Sbjct: 242 ---PTPALSDGV---------VRLRGLPYS--CNEKDIVDFFAG 271
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 VEDVLSFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +PA+S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPTPALS 247
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP++ A+ +I+FF + GKATG+A V F+ E+
Sbjct: 401 FVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFDTHED 451
Query: 500 ADKALSKHKESIGIRYIELF 519
A A+ K + + RYIELF
Sbjct: 452 AVAAMLKDRSHVQHRYIELF 471
>gi|34533956|dbj|BAC86863.1| unnamed protein product [Homo sapiens]
Length = 447
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 145 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 204
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C + ++DFF AG N++D + FV
Sbjct: 205 SLQVKSSPVVNDG---VVRLRGLPYSCNEEDIVDFF-AGL----NIVD----ITFVMDYR 252
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 253 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 297
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 118 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 172
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 173 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 218
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 219 ---------------------VRLRGLPYS--CNEEDIVDFFAG 239
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 357 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 407
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 408 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 439
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 130 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 185
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 186 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 215
>gi|157111781|ref|XP_001651725.1| G-rich sequence factor-1, putative [Aedes aegypti]
gi|108878303|gb|EAT42528.1| AAEL005947-PB [Aedes aegypti]
Length = 491
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 368 VALCLSAFGRR-NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
V +C++ +R GEA +R E + AL ++K + RYIEV A+ + F N
Sbjct: 50 VHICINQMTKRQTGEAYLRMPTLEDQIKALDQNKATLGHRYIEVFTASDDQFDKAV---N 106
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
E A ++RMRGLP+ CT + V FF T + +G G++ + G+A
Sbjct: 107 REESA---EDGGPVLRMRGLPWSCTTEDVKRFFSGLT-----IKNGYNGIVLLLDQLGRA 158
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+G+A V F + EAD+A+SK KE IG RYIELFRS+T E++ N+
Sbjct: 159 SGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRSSTREMKWAENR 204
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 432 FLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGD 489
F + G Q + + +RG+P+ C + + DFF CNV G +P G+ GD
Sbjct: 399 FFSSGEQDLFCVHLRGMPFSCDEQDIYDFFMPLRPVKCNVSFDSRG-----RPSGE--GD 451
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELF 519
A+ F+ EEA KA+ KHKE +G RYIELF
Sbjct: 452 AY--FDTMEEAMKAMKKHKEKMGSRYIELF 479
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IR+RGLP+ T + DF + ++ + + + TG+A++ E+
Sbjct: 23 FIRLRGLPWNITEGDIRDFLSGVEIDQVHIC--------INQMTKRQTGEAYLRMPTLED 74
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
KAL ++K ++G RYIE+F ++ + + +N+
Sbjct: 75 QIKALDQNKATLGHRYIEVFTASDDQFDKAVNR 107
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G G+ L L GR +GEAIV F D A+ + K I RYIE+ +++
Sbjct: 144 GYNGIVLLLDQLGRASGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRSS 194
>gi|151555768|gb|AAI49234.1| GRSF1 protein [Bos taurus]
Length = 362
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLHVKSAPMVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL------------------------HV 123
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P ++ G +RLRGLPY C DI FF G
Sbjct: 124 KSAP-------MVNDGV----VRLRGLPYS--CNEKDIVDFFAG 154
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLHVKSAPMVN 130
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 272 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 318
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 319 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 354
>gi|54020837|ref|NP_001005664.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus (Silurana)
tropicalis]
gi|49257786|gb|AAH74690.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Xenopus (Silurana)
tropicalis]
gi|89269950|emb|CAJ83715.1| hnrph1 [Xenopus (Silurana) tropicalis]
Length = 441
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
GL G+ + GR +GEA V F +E +ALK+ + + RY+EV K+N D++
Sbjct: 38 GLSGIHFIYTREGRPSGEAFVEFETEEDLKLALKKDRATMGHRYVEVFKSNNVEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 98 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 146 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 191
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++ +FF + C + +G G+ F+ +G+ +G+AFV FE EE+
Sbjct: 11 VVKVRGLPWSCSHDEIENFF-----SECKIANGLSGIHFIYTREGRPSGEAFVEFETEED 65
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K + ++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 66 LKLALKKDRATMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 111
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H +Y +G+PSGEAF++ ++E LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 41 GIHFIYTREGRPSGEAFVEFETEEDLKLA--LKKDRATM---GHRYVEVFKSNNVEMDWV 95
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 96 LKHT-GPNSPDTANDG 110
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + FF ++ G DG+ TG+A V F E+A
Sbjct: 279 VHMRGLPYRATETDIYTFFSPLNPVRVHIEIG---------ADGRVTGEADVEFATHEDA 329
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK K ++ RY+ELF ++T
Sbjct: 330 VAAMSKDKANMQHRYVELFLNST 352
>gi|440905001|gb|ELR55451.1| G-rich sequence factor 1, partial [Bos grunniens mutus]
Length = 362
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLHVKSAPMVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL------------------------HV 123
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P ++ G +RLRGLPY C DI FF G
Sbjct: 124 KSAP-------MVNDGV----VRLRGLPYS--CNEKDIVDFFAG 154
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLHVKSAPMVN 130
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 272 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 318
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 319 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 354
>gi|348513989|ref|XP_003444523.1| PREDICTED: G-rich sequence factor 1-like [Oreochromis niloticus]
Length = 400
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 113/232 (48%), Gaps = 28/232 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ G+ L L GR +G A + +E AL++H+ ++ RY+EV +
Sbjct: 122 GVKGIHLTLDRLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVYEVT--------- 172
Query: 424 GNNNEAQAFLTR-----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
N +A+A L + GA ++ +RGLP+ CT ++ FF +G E + E G+
Sbjct: 173 --NGDAEAILKKATQPLGADGVVLLRGLPFTCTEDDIVHFF-SGLEIT------ENGITM 223
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
V G+ +G A+V F +E AD+AL + +E IG RYIE+F S E+ +
Sbjct: 224 VTDSRGRKSGVAYVQFTSQEAADEALQRDREIIGNRYIEVFPSRRDEIHSTWGRRTSPFS 283
Query: 539 NNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ S S + SA + + P P L H+ +S I +RGLP++A
Sbjct: 284 SQSRPQSVDRRSAPE---NRSPASPPPSL--HLQSSTVPLHYIHVRGLPFQA 330
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I++++GLP+ CT + ++ FF + C + DG +G+ G+ +G AF+ E EE+
Sbjct: 95 IVQVKGLPWSCTTQDLLQFF-----SECRIRDGVKGIHLTLDRLGRPSGRAFIEMEHEED 149
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
KAL KH++ +G RY+E++ T + + +L K +
Sbjct: 150 VSKALEKHRQYLGPRYVEVYEVTNGDAEAILKKATQ 185
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 36/180 (20%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG--- 423
G+ + + GR++G A V+F QE D AL+R + I RYIEV + ++ + G
Sbjct: 220 GITMVTDSRGRKSGVAYVQFTSQEAADEALQRDREIIGNRYIEVFPSRRDEIHSTWGRRT 279
Query: 424 ---GNNNEAQAFLTRGAQV---------------------IIRMRGLPYECTAKQVIDFF 459
+ + Q+ R A I +RGLP++ + + ++ FF
Sbjct: 280 SPFSSQSRPQSVDRRSAPENRSPASPPPSLHLQSSTVPLHYIHVRGLPFQASGEDIVKFF 339
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ +L PDG+ +G+A V F +A A+SK + +IG RYIELF
Sbjct: 340 YPLAVSK---------ILIECGPDGRPSGEADVYFHCHRDAVAAMSKDRMNIGERYIELF 390
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L+F E +G+H+ + G+PSG AFI+M EH ++ L +R +
Sbjct: 107 TQDLLQFFSECRIRDGVKGIHLTLDRLGRPSGRAFIEM--EHEEDVSKALEKHRQYL--- 161
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPP 146
RY+EV++ + D +L P
Sbjct: 162 GPRYVEVYEVTNGDAEAILKKATQP 186
>gi|157111783|ref|XP_001651726.1| G-rich sequence factor-1, putative [Aedes aegypti]
gi|108878304|gb|EAT42529.1| AAEL005947-PA [Aedes aegypti]
Length = 471
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 368 VALCLSAFGRR-NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
V +C++ +R GEA +R E + AL ++K + RYIEV A+ + F N
Sbjct: 50 VHICINQMTKRQTGEAYLRMPTLEDQIKALDQNKATLGHRYIEVFTASDDQFDKAV---N 106
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
E A ++RMRGLP+ CT + V FF T + +G G++ + G+A
Sbjct: 107 REESA---EDGGPVLRMRGLPWSCTTEDVKRFFSGLT-----IKNGYNGIVLLLDQLGRA 158
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+G+A V F + EAD+A+SK KE IG RYIELFRS+T E++ N+
Sbjct: 159 SGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRSSTREMKWAENR 204
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 432 FLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGD 489
F + G Q + + +RG+P+ C + + DFF CNV G +P G+ GD
Sbjct: 379 FFSSGEQDLFCVHLRGMPFSCDEQDIYDFFMPLRPVKCNVSFDSRG-----RPSGE--GD 431
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELF 519
A+ F+ EEA KA+ KHKE +G RYIELF
Sbjct: 432 AY--FDTMEEAMKAMKKHKEKMGSRYIELF 459
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IR+RGLP+ T + DF + ++ + + + TG+A++ E+
Sbjct: 23 FIRLRGLPWNITEGDIRDFLSGVEIDQVHIC--------INQMTKRQTGEAYLRMPTLED 74
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
KAL ++K ++G RYIE+F ++ + + +N+
Sbjct: 75 QIKALDQNKATLGHRYIEVFTASDDQFDKAVNR 107
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G G+ L L GR +GEAIV F D A+ + K I RYIE+ +++
Sbjct: 144 GYNGIVLLLDQLGRASGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRSS 194
>gi|426231834|ref|XP_004009942.1| PREDICTED: G-rich sequence factor 1 [Ovis aries]
Length = 362
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLHVKSAPVVNDG---VVRLRGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYR 167
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKSL------------------------HV 123
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
PV + G +RLRGLPY C DI FF G
Sbjct: 124 KSAPV-------VNDGV----VRLRGLPYS--CNEKDIVDFFAG 154
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 45 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLHVKSAPVVN 130
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKK 481
EA F T + + MRGLP++ A+ +I+FF E S +
Sbjct: 272 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS------------- 318
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GKATG+A V F+ E+A A+ K + + RYIELF
Sbjct: 319 --GKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 354
>gi|344244475|gb|EGW00579.1| G-rich sequence factor 1 [Cricetulus griseus]
Length = 621
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 13/162 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED + +
Sbjct: 227 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLH 286
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK- 485
++ + G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 287 VKSSPMVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRR 334
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 335 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 376
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 39/138 (28%)
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+C + + E G+ F+ DGK GDA + E E++ KAL KH+ +G RY+E++ +
Sbjct: 218 NCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNED 277
Query: 526 VQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRG 585
V ++ SL H+ P ++ G +RLRG
Sbjct: 278 VDALM---------KSL---------------HVKSSP-------MVNDGV----VRLRG 302
Query: 586 LPYEALCILMDI--FFVG 601
LPY C DI FF G
Sbjct: 303 LPYS--CNEKDIVDFFAG 318
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H + N G+ G+A I+M+SE A + M G QRY+EV++ + ED++ +
Sbjct: 227 GIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG--QRYVEVYEINNEDVDAL 281
Query: 140 LNGVLPPTSPAIS 152
+ + +SP ++
Sbjct: 282 MKSLHVKSSPMVN 294
>gi|159155917|gb|AAI54577.1| Heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
Length = 403
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 27/238 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGGNNNEAQAFL 433
GR +GEA V F +E A+K+ + + RY+EV K+N D++ G N
Sbjct: 47 GRPSGEAFVEFESEEDLKSAVKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNCPDT--- 103
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
G ++R+RGLP+ C+ ++++ FF AG E N G+ G++TG+AFV
Sbjct: 104 --GGDGLVRLRGLPFGCSKEEIVQFF-AGLEIVPN------GITLPVDFQGRSTGEAFVQ 154
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ---QVLNKTMELPK---------NNS 541
F ++ A+KAL KHKE IG RYIE+F+S+ AEV+ + K M + +
Sbjct: 155 FASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQRKVMGMQRPSPYDRPGGGRG 214
Query: 542 LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
S G+S ++ S T C+ +RGLPY A + FF
Sbjct: 215 YNSMGRGVSFERMRRGGYGGDGRYGDSGSSFQS-TTGHCVHMRGLPYRATETDIYNFF 271
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+ G ++R+RGLP+ C+ +V FF + C + + F +G+ +G+AFV
Sbjct: 1 MADGEGFVVRVRGLPWSCSVDEVQRFF-----SECKIASNGTSIHFTYTREGRPSGEAFV 55
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
FE EE+ A+ K +E++G RY+E+F+S + E+ VL T
Sbjct: 56 EFESEEDLKSAVKKDRETMGHRYVEVFKSNSVEMDWVLKHT 96
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN------------ 414
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 136 GITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQR 195
Query: 415 ----------------GEDFINVAGGNNNE----------------AQAFLTRGAQVIIR 442
G + ++ G + E +F + +
Sbjct: 196 KVMGMQRPSPYDRPGGGRGYNSMGRGVSFERMRRGGYGGDGRYGDSGSSFQSTTGHCV-H 254
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 255 MRGLPYRATETDIYNFFSPLNPVRVHLEIG---------PDGRVTGEADVEFATHEDAVA 305
Query: 503 ALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 306 AMSKDKANMQHRYVELFLNSTA 327
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 62 VEHILEFLGE--FASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ + F E ASN +H Y +G+PSGEAF++ +SE L + ++ +R +
Sbjct: 20 VDEVQRFFSECKIASNGT--SIHFTYTREGRPSGEAFVEFESEED--LKSAVKKDRETM- 74
Query: 120 GKKQRYIEVFQCSGEDMNLVLNGVLP 145
RY+EVF+ + +M+ VL P
Sbjct: 75 --GHRYVEVFKSNSVEMDWVLKHTGP 98
>gi|195108109|ref|XP_001998635.1| GI24079 [Drosophila mojavensis]
gi|193915229|gb|EDW14096.1| GI24079 [Drosophila mojavensis]
Length = 605
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 19/182 (10%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
+L+ + E + G G+ L S G+ GEA V QE + A K +K + RYIEV
Sbjct: 75 ILDFLVNVEVLNGSQGIHLVTSRLDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEV 134
Query: 411 ---TKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSC 467
T ++ + GG+ G ++++RGLPY T +Q+ +FF
Sbjct: 135 FVATPKEAKEAMRKTGGH----------GHAFVVKLRGLPYAVTEQQIEEFFTG-----L 179
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+ EG+LFV G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 180 EIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 239
Query: 528 QV 529
+
Sbjct: 240 RA 241
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
IR+RGLP+ T K+++DF + V++G +G+ L + DGK TG+A+V +E
Sbjct: 60 FIRLRGLPWSATHKEILDFLV-----NVEVLNGSQGIHLVTSRLDGKNTGEAYVEVASQE 114
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ ++A +K S+G RYIE+F +T E ++ + KT
Sbjct: 115 DVEEARKLNKASMGHRYIEVFVATPKEAKEAMRKT 149
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FF+ NV + + KK T DA+ F+ +++
Sbjct: 487 IHMRGLPYNSFENDVFKFFDP--IRPANVR-----INYNKKGLHSGTADAY--FDTYDDS 537
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 538 QLAMKRHREQMGSRYIELF 556
>gi|198454671|ref|XP_002137931.1| GA27490 [Drosophila pseudoobscura pseudoobscura]
gi|198132901|gb|EDY68489.1| GA27490 [Drosophila pseudoobscura pseudoobscura]
Length = 610
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 19/167 (11%)
Query: 367 GVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA 422
G+ L S G+ GEA V QE + A K +K + RYIEV T ++ +
Sbjct: 83 GIHLVTSRVDGKNTGEAYVEVATQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRKI 142
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG+ N AF ++++RGLPY T +Q+ +FF + EG+LFV
Sbjct: 143 GGHGN---AF-------VVKLRGLPYAVTEQQIEEFFTG-----LEIKTDREGILFVMDR 187
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
G+ATG+AFV FE +E+ ++AL +++E IG RYIE+FRS+ AE+++
Sbjct: 188 RGRATGEAFVQFESQEDTEQALGRNREKIGHRYIEIFRSSIAEMKRA 234
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 415 GEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
G D +NV N E+ F IR+RGLP+ T K+++DF E + NV + +
Sbjct: 36 GNDGVNVKIENVGESPKF--------IRLRGLPWSATHKEILDFLE-----NVNVTNASQ 82
Query: 475 GV-LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
G+ L + DGK TG+A+V +E+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 83 GIHLVTSRVDGKNTGEAYVEVATQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 141
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 435 RGAQV---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
RG+ V I MRGLPY V FFE NV + + KK T DA+
Sbjct: 490 RGSDVEYYTIHMRGLPYTSFENDVFKFFEP--VRPANVR-----INYNKKGLHSGTADAY 542
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELF 519
F+ E++ A+ +H+E +G RYIELF
Sbjct: 543 --FDTYEDSQIAMKRHREQMGSRYIELF 568
>gi|91094511|ref|XP_971832.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H
(hnRNP H) [Tribolium castaneum]
gi|270000730|gb|EEZ97177.1| hypothetical protein TcasGA2_TC004364 [Tribolium castaneum]
Length = 379
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 23/170 (13%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---INVAG 423
G+ + S GR +GEA V F ++ + AL++ + HI RYIEV K N + I +G
Sbjct: 41 GIHMTSSREGRPSGEAFVEFESEDDLNSALRKDREHIGSRYIEVFKVNKAEMDWVIKRSG 100
Query: 424 ---GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
G N++ +R+RGLP+ C+ +++ FF G E N G+ +
Sbjct: 101 PTYGVNDDG----------CVRLRGLPFGCSKEEIAQFF-TGLEIVPN------GITLLT 143
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G+++G+A+V F +E A+KAL KH+E IG RYIE+FRS+ +EV VL
Sbjct: 144 DYSGRSSGEAYVQFVNKEVAEKALLKHREKIGHRYIEIFRSSLSEVNSVL 193
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 43/163 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+++RGLP+ T + ++ FF+ +C V +G+ G+ +G+ +G+AFV FE E++
Sbjct: 11 IVKLRGLPWSATTEDILKFFK-----NCKVFNGKLGIHMTSSREGRPSGEAFVEFESEDD 65
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ AL K +E IG RYIE+F+ AE+ V+ ++ P
Sbjct: 66 LNSALRKDREHIGSRYIEVFKVNKAEMDWVIKRS-------------------GP----- 101
Query: 560 AQVPVPYLPQHIITSGTRKD-CIRLRGLPYEALCILMDIFFVG 601
T G D C+RLRGLP+ + FF G
Sbjct: 102 -------------TYGVNDDGCVRLRGLPFGCSKEEIAQFFTG 131
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 62 VEHILEFLGEFASNIVYQG---VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
E IL+F F + V+ G +HM + +G+PSGEAF++ +SE L + LR +R I
Sbjct: 23 TEDILKF---FKNCKVFNGKLGIHMTSSREGRPSGEAFVEFESEDD--LNSALRKDREHI 77
Query: 119 FGKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ + +M+ V+
Sbjct: 78 ---GSRYIEVFKVNKAEMDWVI 96
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP++ TA + DFF+ + V ++ +G+A+G+A V F E+A
Sbjct: 290 VHMRGLPFKATAADITDFFKPIVPTN---------VKLLQDHNGRASGEADVEFASHEDA 340
Query: 501 DKALSKHKESIGIRYIELF 519
+A+SK K + RYIELF
Sbjct: 341 MRAMSKDKGHMQHRYIELF 359
>gi|390361165|ref|XP_793087.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 348 WLSLLLNTIPGYEQVLGLGG---VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHID 404
W + + +E LG + ++ GR +GE V F + A+K+ K+++
Sbjct: 17 WSTTAEEVMDFFEDCNILGAPDSIKFIFNSSGRPSGECFVEFDSEGDFQQAMKKDKNYLQ 76
Query: 405 KRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
KRYIE+ K+ + V N+ A G + ++++RGLP+ C+ +++ +FF T
Sbjct: 77 KRYIELFKSKRSEMEWVTNRNSGGAD-----GGEGLVKLRGLPFSCSKEEIAEFFSGLTI 131
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ G+ DG+ TG+AFVLF +E A+KAL KHK +G RYIE+F+S
Sbjct: 132 QA-------NGITLPSDNDGRRTGEAFVLFASKEIAEKALKKHKSHMGHRYIEVFKSFPD 184
Query: 525 EVQQVLNKT 533
E+++ N T
Sbjct: 185 ELRRATNPT 193
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR RGLP+ TA++V+DFFE CN++ + + F+ G+ +G+ FV F+ E +
Sbjct: 9 VIRARGLPWSTTAEEVMDFFE-----DCNILGAPDSIKFIFNSSGRPSGECFVEFDSEGD 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+A+ K K + RYIELF+S +E++ V N+
Sbjct: 64 FQQAMKKDKNYLQKRYIELFKSKRSEMEWVTNR 96
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + + +FF G+ NV+ + +GK G A V F +EA
Sbjct: 327 VHMRGLPFSVTEQDIKEFFH-GSATPSNVV--------IHDINGKRNGFAAVDFRTHDEA 377
Query: 501 DKALSKHKESIGIRYIELF 519
A+ K K +IG RYIELF
Sbjct: 378 KAAMKKDKNNIGSRYIELF 396
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 81 VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL 140
+ ++NS G+PSGE F++ DSE A ++ ++N + ++RYIE+F+ +M V
Sbjct: 40 IKFIFNSSGRPSGECFVEFDSEGDFQQA--MKKDKNYL---QKRYIELFKSKRSEMEWVT 94
Query: 141 N 141
N
Sbjct: 95 N 95
>gi|442755167|gb|JAA69743.1| Putative splicing factor hnrnp-f [Ixodes ricinus]
Length = 279
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ G+ + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GVSGIHFIYTREGRQSGEAFVELESEDDVKMALKKDRERMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N +
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPNR------ITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ +V
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEKV 191
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SGCIIHDGVSGIHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +E +G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRERMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + G+H +Y +G+ SGEAF++++SE +A L+ +R +
Sbjct: 24 VEDVQNFLSGCIIHDGVSGIHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRERM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ VL
Sbjct: 79 GHRYIEVFKSHRTEMDWVLK 98
>gi|26251966|gb|AAH40485.1| GRSF1 protein [Homo sapiens]
Length = 435
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 178 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 237
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++ + FV
Sbjct: 238 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIV----YITFVMDYR 285
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 286 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 151 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 205
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 206 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 251
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 252 ---------------------VRLRGLPYS--CNEKDIVDFFAG 272
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 163 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KH--RMYMG- 218
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 219 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 248
>gi|195037855|ref|XP_001990376.1| GH18272 [Drosophila grimshawi]
gi|193894572|gb|EDV93438.1| GH18272 [Drosophila grimshawi]
Length = 622
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRY 407
L L+N E + G G+ L S G+ GEA V QE + A K +K + RY
Sbjct: 78 LDFLVNV----EVINGSQGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKVSMGHRY 133
Query: 408 IEV---TKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
IEV T ++ + GG+ G ++++RGLPY T +Q+ +FF
Sbjct: 134 IEVFTATPKEAKEAMRKTGGH----------GHAFVVKLRGLPYAVTEQQIEEFFTG--- 180
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ EG+LFV G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ A
Sbjct: 181 --LEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIA 238
Query: 525 EVQQV 529
E+++
Sbjct: 239 EMKRA 243
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
IR+RGLP+ T K+++DF + V++G +G+ L + DGK TG+A+V +E
Sbjct: 62 FIRLRGLPWSATHKEILDFLV-----NVEVINGSQGIHLVTSRVDGKNTGEAYVEVASQE 116
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ ++A +K S+G RYIE+F +T E ++ + KT
Sbjct: 117 DVEEARKLNKVSMGHRYIEVFTATPKEAKEAMRKT 151
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 521 IHMRGLPYNSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 571
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 572 QLAMKRHREQMGSRYIELF 590
>gi|26346715|dbj|BAC37006.1| unnamed protein product [Mus musculus]
Length = 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 128 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCT--VEDV-----LNFFSDCRIRNSENG 180
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 240
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+ GLPY C K ++DFF AG N++D + FV G+
Sbjct: 241 KPSPVLSDG---VVRLTGLPYSCNEKDIVDFF-AG----LNIVD----ITFVMDYRGRRK 288
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 289 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 241
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RL GLPY C DI FF G
Sbjct: 242 --------PSPVLSDGV----VRLTGLPYS--CNEKDIVDFFAG 271
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 247
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 471
>gi|147906713|ref|NP_001086923.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus laevis]
gi|50417963|gb|AAH77770.1| Hnrph2-prov protein [Xenopus laevis]
gi|84569955|gb|AAI10708.1| Hnrph2 protein [Xenopus laevis]
Length = 456
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
GL G+ + GR +GEA V F +E + LK+ + + RY+EV K+N D++
Sbjct: 38 GLSGIHFIYTREGRPSGEAFVEFETEEDLKLGLKKDRATMGHRYVEVFKSNNVEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 98 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 146 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 191
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++ +FF + C + +G G+ F+ +G+ +G+AFV FE EE+
Sbjct: 11 VVKVRGLPWSCSHDEIENFF-----SECKIANGLSGIHFIYTREGRPSGEAFVEFETEED 65
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
L K + ++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 66 LKLGLKKDRATMGHRYVEVFKSNNVEMDWVLKHTGP----NSPDTANDGF 111
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H +Y +G+PSGEAF++ ++E L L+ +R + RY+EVF+ + +M+ V
Sbjct: 41 GIHFIYTREGRPSGEAFVEFETEEDLKLG--LKKDRATM---GHRYVEVFKSNNVEMDWV 95
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 96 LKHT-GPNSPDTANDG 110
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + FF ++ G DG+ TG+A V F E+A
Sbjct: 279 VHMRGLPYRATETDIYTFFSPLNPVRVHIEIG---------ADGRVTGEADVEFATHEDA 329
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK K ++ RY+ELF ++T
Sbjct: 330 VAAMSKDKANMQHRYVELFLNST 352
>gi|390361167|ref|XP_003729861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 1
[Strongylocentrotus purpuratus]
Length = 455
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 348 WLSLLLNTIPGYEQVLGLGG---VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHID 404
W + + +E LG + ++ GR +GE V F + A+K+ K+++
Sbjct: 17 WSTTAEEVMDFFEDCNILGAPDSIKFIFNSSGRPSGECFVEFDSEGDFQQAMKKDKNYLQ 76
Query: 405 KRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
KRYIE+ K+ + V N+ A G + ++++RGLP+ C+ +++ +FF T
Sbjct: 77 KRYIELFKSKRSEMEWVTNRNSGGAD-----GGEGLVKLRGLPFSCSKEEIAEFFSGLTI 131
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ G+ DG+ TG+AFVLF +E A+KAL KHK +G RYIE+F+S
Sbjct: 132 QA-------NGITLPSDNDGRRTGEAFVLFASKEIAEKALKKHKSHMGHRYIEVFKSFPD 184
Query: 525 EVQQVLNKT 533
E+++ N T
Sbjct: 185 ELRRATNPT 193
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR RGLP+ TA++V+DFFE CN++ + + F+ G+ +G+ FV F+ E +
Sbjct: 9 VIRARGLPWSTTAEEVMDFFE-----DCNILGAPDSIKFIFNSSGRPSGECFVEFDSEGD 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+A+ K K + RYIELF+S +E++ V N+
Sbjct: 64 FQQAMKKDKNYLQKRYIELFKSKRSEMEWVTNR 96
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + + +FF G+ NV+ + +GK G A V F +EA
Sbjct: 327 VHMRGLPFSVTEQDIKEFFH-GSATPSNVV--------IHDINGKRNGFAAVDFRTHDEA 377
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
A+ K K +IG RYIELF ++ E
Sbjct: 378 KAAMKKDKNNIGSRYIELFLHSSEE 402
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 81 VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL 140
+ ++NS G+PSGE F++ DSE A ++ ++N + ++RYIE+F+ +M V
Sbjct: 40 IKFIFNSSGRPSGECFVEFDSEGDFQQA--MKKDKNYL---QKRYIELFKSKRSEMEWVT 94
Query: 141 N 141
N
Sbjct: 95 N 95
>gi|348516774|ref|XP_003445912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Oreochromis niloticus]
Length = 406
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 32/251 (12%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA V F +E +A+K+ + + RY+EV K+N D++ G
Sbjct: 37 GIHFTYTREGRPSGEAFVEFETEEDLKIAVKKDRETMGHRYVEVFKSNNVEMDWVMKHTG 96
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N A ++R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 97 PNCPETA-----GDGLVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDIQG 144
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ-----QVLNKTMELPKN 539
++TG+AFV F ++ A+KAL KHKE IG RYIE+F+S+ AEV+ Q M+ P
Sbjct: 145 RSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQRKPMGMQRPGP 204
Query: 540 NSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKD-----------CIRLRGLPY 588
S G + S+ ++ G D C+ +RGLPY
Sbjct: 205 YDRPSGGRGYNMMGRGGSY--DRMRRGGYGGGVSDGRYGDGGSSFQSTTGHCVHMRGLPY 262
Query: 589 EALCILMDIFF 599
A + FF
Sbjct: 263 RATETDIYNFF 273
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ +V FF + C +++ G+ F +G+ +G+AFV FE EE+
Sbjct: 7 VVRIRGLPWSCSVDEVQRFF-----SDCKILNNGSGIHFTYTREGRPSGEAFVEFETEED 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
A+ K +E++G RY+E+F+S E+ V+ T
Sbjct: 62 LKIAVKKDRETMGHRYVEVFKSNNVEMDWVMKHT 95
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 55/204 (26%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN------------ 414
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 135 GITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQR 194
Query: 415 ------------------GEDFINVAG----------------GNNNEAQAFLTRGAQVI 440
G + + G G + +
Sbjct: 195 KPMGMQRPGPYDRPSGGRGYNMMGRGGSYDRMRRGGYGGGVSDGRYGDGGSSFQSTTGHC 254
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 255 VHMRGLPYRATETDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 305
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 306 VAAMSKDKANMQHRYVELFLNSTA 329
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H Y +G+PSGEAF++ ++E +A ++ +R + RY+EVF+ + +M+ V
Sbjct: 37 GIHFTYTREGRPSGEAFVEFETEEDLKIA--VKKDRETM---GHRYVEVFKSNNVEMDWV 91
Query: 140 LNGVLP 145
+ P
Sbjct: 92 MKHTGP 97
>gi|24646105|ref|NP_650120.1| glorund, isoform A [Drosophila melanogaster]
gi|24646107|ref|NP_731639.1| glorund, isoform B [Drosophila melanogaster]
gi|7299517|gb|AAF54704.1| glorund, isoform A [Drosophila melanogaster]
gi|7299518|gb|AAF54705.1| glorund, isoform B [Drosophila melanogaster]
gi|19528177|gb|AAL90203.1| AT27789p [Drosophila melanogaster]
Length = 586
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 21/169 (12%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A +
Sbjct: 77 GSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPK------ 130
Query: 423 GGNNNEAQAFLTR----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
EA+ + + G ++++RGLPY T +Q+ +FF ++ EG+LF
Sbjct: 131 -----EAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSG-----LDIKTDREGILF 180
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 181 VMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 229
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 15/131 (11%)
Query: 412 KANGEDFINVAGGNNNEAQAFLTRGAQVI---------IRMRGLPYECTAKQVIDFFEAG 462
+ NG++F + + +E + G I +R+RGLP+ T K+++DF E
Sbjct: 13 QGNGDNFNDDSNQQQDEDDQYNEDGGGKIENVGESPKFVRLRGLPWSATHKEILDFLE-- 70
Query: 463 TENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
+ NV +G G+ L + DGK TG+A+V +E+ ++A +K S+G RYIE+F +
Sbjct: 71 ---NVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTA 127
Query: 522 TTAEVQQVLNK 532
T E ++ + K
Sbjct: 128 TPKEAKEAMRK 138
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 483 IHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 533
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 534 QVAMKRHREQMGSRYIELF 552
>gi|195445396|ref|XP_002070305.1| GK11105 [Drosophila willistoni]
gi|194166390|gb|EDW81291.1| GK11105 [Drosophila willistoni]
Length = 642
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 19/170 (11%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA---NGEDFI 419
G G+ L S G+ GEA V QE + A K +K + RYIEV A ++ +
Sbjct: 82 GSQGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAM 141
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
GG+ A AF ++++RGLPY T +Q+ +FF + EG+LFV
Sbjct: 142 RKIGGH---ANAF-------VVKLRGLPYAVTEQQIEEFF-----TGLEIKTDREGILFV 186
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE+++
Sbjct: 187 TDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMKRA 236
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
IR+RGLP+ T K+++DF E + NV +G +G+ L + DGK TG+A+V +E
Sbjct: 55 FIRLRGLPWSATHKEILDFLE-----NVNVTNGSQGIHLVTSRVDGKNTGEAYVEVASQE 109
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 110 DVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 143
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 524 IHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 574
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 575 QLAMKRHREQMGSRYIELF 593
>gi|311262314|ref|XP_003129120.1| PREDICTED: G-rich sequence factor 1-like [Sus scrofa]
Length = 479
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 177 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 236
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG +++D + FV
Sbjct: 237 NLHVKSTPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----HIVD----ITFVMDYR 284
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 285 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ H+
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALMKNL------------------------HV 240
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
PV + G +RLRGLPY C DI FF G
Sbjct: 241 KSTPV-------VNDGV----VRLRGLPYS--CNEKDIVDFFAG 271
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 471
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 218 -QRYVEVYEINNEDVDALMKNLHVKSTPVVN 247
>gi|156375031|ref|XP_001629886.1| predicted protein [Nematostella vectensis]
gi|156216896|gb|EDO37823.1| predicted protein [Nematostella vectensis]
Length = 354
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
GV GR +GE V+F+ ++ + AL+ + H+ KRYIEV ++ E+ V
Sbjct: 37 GVHFTFGIDGRPSGECFVQFVSEKDVEKALEMNNEHMGKRYIEVFRSKAEEMEWVI---- 92
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
R + ++++RGLPY C+ +++ FF G E N G+ +GK
Sbjct: 93 KRMGPPSDRDQEAVVKLRGLPYGCSKEEIAQFF-TGLEIVPN------GITITLDEEGKT 145
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
TG+ FV F E A +A+ KHKE IG RYIE+F+S+ ++++ VL
Sbjct: 146 TGEGFVEFASPEIAGQAMQKHKEKIGHRYIEIFKSSKSDIKYVL 189
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG-EEGVLFVKKPDGKATGDAFVLFEK 496
+ ++R RGLP+ T + + +FF+ CN++ G + GV F DG+ +G+ FV F
Sbjct: 4 ECVVRARGLPWSATPEDIQNFFK-----DCNIVGGPQNGVHFTFGIDGRPSGECFVQFVS 58
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ +KAL + E +G RYIE+FRS E++ V+ +
Sbjct: 59 EKDVEKALEMNNEHMGKRYIEVFRSKAEEMEWVIKR 94
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GVH + G+PSGE F+Q SE A ++ +N +M +RYIEVF+ E+M V
Sbjct: 37 GVHFTFGIDGRPSGECFVQFVSEKDVEKALEM-NNEHM----GKRYIEVFRSKAEEMEWV 91
Query: 140 LNGVLPPTS 148
+ + PP+
Sbjct: 92 IKRMGPPSD 100
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ V FF N ++ V PDG+ G+ V F +A
Sbjct: 249 VAMRGLPFGAKETDVKQFF-----MPLNPVE----VRLRWGPDGRCCGEGEVDFATHADA 299
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQ 528
A+SK ++++G RYIELF +++ + Q
Sbjct: 300 TAAMSKDRQTMGHRYIELFLNSSPDGSQ 327
>gi|195329730|ref|XP_002031563.1| GM26067 [Drosophila sechellia]
gi|194120506|gb|EDW42549.1| GM26067 [Drosophila sechellia]
Length = 563
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A +
Sbjct: 77 GSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPK------ 130
Query: 423 GGNNNEAQAFLTR----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
EA+ + + G ++++RGLPY T +Q+ +FF + EG+LF
Sbjct: 131 -----EAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSG-----LEIKTDREGILF 180
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 181 VMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 229
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
+R+RGLP+ T K+++DF E + NV +G G+ L + DGK TG+A+V +E
Sbjct: 50 FVRLRGLPWSATHKEILDFLE-----NVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQE 104
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 105 DVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 138
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 435 RGAQV---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
RG V I MRGLPY V FFE NV + + KK T DA+
Sbjct: 450 RGNDVEYYTIHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY 502
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELF 519
F+ E++ A+ +H+E +G RYIELF
Sbjct: 503 --FDTYEDSQVAMKRHREQMGSRYIELF 528
>gi|195571637|ref|XP_002103809.1| GD20630 [Drosophila simulans]
gi|194199736|gb|EDX13312.1| GD20630 [Drosophila simulans]
Length = 587
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A +
Sbjct: 77 GSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPK------ 130
Query: 423 GGNNNEAQAFLTR----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
EA+ + + G ++++RGLPY T +Q+ +FF + EG+LF
Sbjct: 131 -----EAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSG-----LEIKTDREGILF 180
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 181 VMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 229
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
+R+RGLP+ T K+++DF E + NV +G G+ L + DGK TG+A+V +E
Sbjct: 50 FVRLRGLPWSATHKEILDFLE-----NVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQE 104
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 105 DVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 138
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 435 RGAQV---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
RG V I MRGLPY V FFE NV + + KK T DA+
Sbjct: 474 RGNDVEYYTIHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY 526
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELF 519
F+ E++ A+ +H+E +G RYIELF
Sbjct: 527 --FDTYEDSQVAMKRHREQMGSRYIELF 552
>gi|148237217|ref|NP_001085008.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus laevis]
gi|47507485|gb|AAH70969.1| MGC78776 protein [Xenopus laevis]
Length = 441
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
GL GV + GR +GEA V F ++ +A+K+ + + RY+EV K+N D++
Sbjct: 38 GLSGVHFIYTREGRPSGEAFVEFETEDDLQLAVKKDRATMAHRYVEVFKSNSVEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 98 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 146 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 191
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++ +FF + + +G GV F+ +G+ +G+AFV FE E++
Sbjct: 11 VVKVRGLPWSCSHDEIENFF-----SESKIANGLSGVHFIYTREGRPSGEAFVEFETEDD 65
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
A+ K + ++ RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 66 LQLAVKKDRATMAHRYVEVFKSNSVEMDWVLKHTGP----NSPDTANDGF 111
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GVH +Y +G+PSGEAF++ ++E LA ++ +R + RY+EVF+ + +M+ V
Sbjct: 41 GVHFIYTREGRPSGEAFVEFETEDDLQLA--VKKDRATM---AHRYVEVFKSNSVEMDWV 95
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 96 LKHT-GPNSPDTANDG 110
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + FF ++ G DG+ TG+A V F E+A
Sbjct: 279 VHMRGLPYRATETDIYTFFSPLNPVRVHIEIG---------ADGRVTGEADVEFASHEDA 329
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 330 VAAMSKDKANMQHRYVELFLNSTA 353
>gi|356531341|ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Glycine max]
Length = 264
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 35/190 (18%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN---- 425
L ++ GR +GEA V F + AL+R + ++ +RY+EV + +D+ N G
Sbjct: 86 LLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAGEINYE 145
Query: 426 --------------------NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN 465
N++ Q T I++MRGLP++ T Q+++FF+
Sbjct: 146 GIYDNDYHGSSPPPSRLKRFNDKDQMEYTE----ILKMRGLPFQVTKSQIVEFFK----- 196
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+ E+ V +PDGKATG+A+V F EEA +A+SK K +IG RY+ELF ST E
Sbjct: 197 --DFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDE 254
Query: 526 VQQVLNKTME 535
++ +++ +
Sbjct: 255 ARRAESRSRQ 264
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++ FF T ++D VL V K G+ +G+AFV+F +
Sbjct: 58 VVRLRGLPFNCTDIDILKFFAGLT-----IVD----VLLVNK-SGRFSGEAFVVFAGAMQ 107
Query: 500 ADKALSKHKESIGIRYIELFR 520
+ AL + ++++G RY+E+FR
Sbjct: 108 VEFALQRDRQNMGRRYVEVFR 128
>gi|194901932|ref|XP_001980505.1| GG17187 [Drosophila erecta]
gi|190652208|gb|EDV49463.1| GG17187 [Drosophila erecta]
Length = 595
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 21/169 (12%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A +
Sbjct: 77 GSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPK------ 130
Query: 423 GGNNNEAQAFLTR----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
EA+ + + G ++++RGLPY T +Q+ +FF +G E + EG+LF
Sbjct: 131 -----EAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFF-SGLE----IKTDREGILF 180
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 181 VMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 229
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
+R+RGLP+ T K+++DF E + NV +G G+ L + DGK TG+A+V +E
Sbjct: 50 FVRLRGLPWSATHKEILDFLE-----NVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQE 104
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 105 DVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 138
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 483 IHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 533
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 534 QVAMKRHREQMGSRYIELF 552
>gi|195501785|ref|XP_002097942.1| GE10080 [Drosophila yakuba]
gi|194184043|gb|EDW97654.1| GE10080 [Drosophila yakuba]
Length = 597
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 21/169 (12%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A +
Sbjct: 78 GSSGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPK------ 131
Query: 423 GGNNNEAQAFLTR----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
EA+ + + G ++++RGLPY T +Q+ +FF +G E + EG+LF
Sbjct: 132 -----EAKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFF-SGLE----IKTDREGILF 181
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 182 VMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 230
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
+R+RGLP+ T K+++DF E + NV +G G+ L + DGK TG+A+V +E
Sbjct: 51 FVRLRGLPWSATHKEILDFLE-----NVNVTNGSSGIHLVTSRVDGKNTGEAYVEVASQE 105
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 106 DVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 139
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 486 IHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 536
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 537 QVAMKRHREQMGSRYIELF 555
>gi|148707962|gb|EDL39909.1| mCG129396 [Mus musculus]
Length = 415
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + G ++GEA V ++ +ALK+ + + YIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGSQSGEAFVELESEDDVKLALKKDRESMGHPYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGSQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G YIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHPYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPFNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGSQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
YIEVF+ +M+ VL P ++ +
Sbjct: 79 GHPYIEVFKSHRTEMDWVLKHSGPNSADS 107
>gi|356531343|ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Glycine max]
Length = 257
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 35/190 (18%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN---- 425
L ++ GR +GEA V F + AL+R + ++ +RY+EV + +D+ N G
Sbjct: 79 LLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAGEINYE 138
Query: 426 --------------------NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN 465
N++ Q T I++MRGLP++ T Q+++FF+
Sbjct: 139 GIYDNDYHGSSPPPSRLKRFNDKDQMEYTE----ILKMRGLPFQVTKSQIVEFFK----- 189
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+ E+ V +PDGKATG+A+V F EEA +A+SK K +IG RY+ELF ST E
Sbjct: 190 --DFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDE 247
Query: 526 VQQVLNKTME 535
++ +++ +
Sbjct: 248 ARRAESRSRQ 257
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++ FF T ++D VL V K G+ +G+AFV+F +
Sbjct: 51 VVRLRGLPFNCTDIDILKFFAGLT-----IVD----VLLVNK-SGRFSGEAFVVFAGAMQ 100
Query: 500 ADKALSKHKESIGIRYIELFR 520
+ AL + ++++G RY+E+FR
Sbjct: 101 VEFALQRDRQNMGRRYVEVFR 121
>gi|195395450|ref|XP_002056349.1| GJ10899 [Drosophila virilis]
gi|194143058|gb|EDW59461.1| GJ10899 [Drosophila virilis]
Length = 615
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 19/182 (10%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
+L+ + E + G G+ L S G+ GEA V Q+ + A K +K + RYIEV
Sbjct: 77 ILDFLVNVEVLNGSQGIHLVTSRVDGKNTGEAYVEVASQDDVEEARKLNKASMGHRYIEV 136
Query: 411 ---TKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSC 467
T ++ + GG+ G ++++RGLPY T +Q+ +FF
Sbjct: 137 FVATPKEAKEAMRKTGGH----------GHAFVVKLRGLPYAVTEQQIEEFFTG-----L 181
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+ EG+LFV G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 182 EIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 241
Query: 528 QV 529
+
Sbjct: 242 RA 243
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
IR+RGLP+ T K+++DF + V++G +G+ L + DGK TG+A+V ++
Sbjct: 62 FIRLRGLPWSATHKEILDFLV-----NVEVLNGSQGIHLVTSRVDGKNTGEAYVEVASQD 116
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ ++A +K S+G RYIE+F +T E ++ + KT
Sbjct: 117 DVEEARKLNKASMGHRYIEVFVATPKEAKEAMRKT 151
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FF+ NV + + KK T DA+ F+ +++
Sbjct: 507 IHMRGLPYNSFENDVFKFFDP--IRPANVR-----INYNKKGLHSGTADAY--FDTYDDS 557
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 558 QLAMKRHREQMGSRYIELF 576
>gi|355705000|gb|EHH30925.1| Heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
Length = 449
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++ LP+ C+A +V+ FF + + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVSALPWSCSADEVMRFF-----SDRKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDRKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|9624998|ref|NP_062543.1| heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]
gi|74099697|ref|NP_001027565.1| heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]
gi|197100479|ref|NP_001125156.1| heterogeneous nuclear ribonucleoprotein H2 [Pongo abelii]
gi|302565696|ref|NP_001180922.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|350536397|ref|NP_001233423.1| heterogeneous nuclear ribonucleoprotein H2 [Pan troglodytes]
gi|109131568|ref|XP_001094080.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Macaca mulatta]
gi|296236002|ref|XP_002763136.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Callithrix jacchus]
gi|332254772|ref|XP_003276506.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Nomascus
leucogenys]
gi|390480025|ref|XP_003735831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Callithrix
jacchus]
gi|403298789|ref|XP_003940188.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Saimiri boliviensis boliviensis]
gi|403298791|ref|XP_003940189.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Saimiri boliviensis boliviensis]
gi|426396685|ref|XP_004064561.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Gorilla gorilla gorilla]
gi|426396687|ref|XP_004064562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Gorilla gorilla gorilla]
gi|426396689|ref|XP_004064563.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Gorilla gorilla gorilla]
gi|2500576|sp|P55795.1|HNRH2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=FTP-3; AltName:
Full=Heterogeneous nuclear ribonucleoprotein H';
Short=hnRNP H'
gi|75070864|sp|Q5RD26.1|HNRH2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|1684915|gb|AAB64202.1| FTP3 [Homo sapiens]
gi|55727150|emb|CAH90331.1| hypothetical protein [Pongo abelii]
gi|119623269|gb|EAX02864.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|120660030|gb|AAI30346.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|120660336|gb|AAI30344.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|168277748|dbj|BAG10852.1| heterogeneous nuclear ribonucleoprotein H' [synthetic construct]
gi|313883006|gb|ADR82989.1| heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2),
transcript variant 2 [synthetic construct]
gi|313883348|gb|ADR83160.1| heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2),
transcript variant 2 [synthetic construct]
gi|343958876|dbj|BAK63293.1| heterogeneous nuclear ribonucleoprotein H' [Pan troglodytes]
gi|380812318|gb|AFE78033.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|384946774|gb|AFI36992.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|410264162|gb|JAA20047.1| RPL36A-HNRNPH2 readthrough [Pan troglodytes]
gi|410303792|gb|JAA30496.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410303794|gb|JAA30497.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410355365|gb|JAA44286.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410355367|gb|JAA44287.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
Length = 449
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|452823782|gb|EME30790.1| RNA-binding protein [Galdieria sulphuraria]
Length = 739
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 34/293 (11%)
Query: 322 LNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGE 381
+ +P +PT G+ + L L + +LN + G QV+ V L+ G+ GE
Sbjct: 242 IEASPVAAGVPT-GSIIRLRGLPWSATKEDVLNFLEG-AQVIPCA-VHFVLNQQGKPRGE 298
Query: 382 AIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF--LTRGAQ- 438
A V+ + + + AL+ H+ + RYIEV K+ ++ V N + + +R
Sbjct: 299 AFVQLLSVDDVNRALELHRQVLGHRYIEVFKSTPQEMSTVLSRQNGRSTSLAPFSRTTYS 358
Query: 439 -----------VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
IIRMRGLP+ +A QV FF+ C G+ V+ DG
Sbjct: 359 NVSSIDDSKPFFIIRMRGLPFSASADQVARFFDGIEIAGCR---SNGGIHIVQNQDGHPI 415
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNN 547
G+AFV F E+ +KAL +HK+ +G RYIELFRS+ E+ + + +
Sbjct: 416 GEAFVEFASEDALNKALQRHKQMMGKRYIELFRSSLMEMLNTIER-------------HG 462
Query: 548 GLSAQQPMLSHLAQVPVPYLPQHIITS-GTRKDCIRLRGLPYEALCILMDIFF 599
G A+ + + + + V + ++ S + +R+RGLP++ + FF
Sbjct: 463 GPVARAAIEATVCENSVGTSSRSVLNSDASTCSFLRIRGLPFDTTVSDITTFF 515
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 50/273 (18%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA--- 422
GG+ + + G GEA V F ++ + AL+RHK + KRYIE+ +++ + +N
Sbjct: 402 GGIHIVQNQDGHPIGEAFVEFASEDALNKALQRHKQMMGKRYIELFRSSLMEMLNTIERH 461
Query: 423 GG---------------NNNEAQAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTEN 465
GG +++ L A +R+RGLP++ T + FF
Sbjct: 462 GGPVARAAIEATVCENSVGTSSRSVLNSDASTCSFLRIRGLPFDTTVSDITTFFA----- 516
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH-KESIGIRYIELFRSTTA 524
++ G G+ FV + G+AFV F +E + AL K K +G RY+ELF ++ A
Sbjct: 517 EYRIVPG--GIYFVNNGLDRPKGEAFVQFSSVDERNDALKKKDKLYMGSRYVELFEASEA 574
Query: 525 EVQQVLNKTM-----------------ELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYL 567
EV +L + + +N T SN L+ + A +
Sbjct: 575 EVSALLGSNLCSTITSAASSIANSSSAKSTFSNPNTKSNELLTWESVGRGWDASSWKSNI 634
Query: 568 PQ-HIITSGTRKDCIRLRGLPYEALCILMDIFF 599
P+ HII + T +R+RGLP+ A + FF
Sbjct: 635 PKSHIIPNRT----VRMRGLPFRATISDIQFFF 663
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 35/167 (20%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IIR+RGLP+ T + V++F E C V FV GK G+AFV ++
Sbjct: 256 IIRLRGLPWSATKEDVLNFLEGAQVIPC-------AVHFVLNQQGKPRGEAFVQLLSVDD 308
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK-----TMELPKNNSLTSSNNGLSAQQP 554
++AL H++ +G RYIE+F+ST E+ VL++ T P + + S+ + + +P
Sbjct: 309 VNRALELHRQVLGHRYIEVFKSTPQEMSTVLSRQNGRSTSLAPFSRTTYSNVSSIDDSKP 368
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
IR+RGLP+ A + FF G
Sbjct: 369 FF-----------------------IIRMRGLPFSASADQVARFFDG 392
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 55/205 (26%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH-KHHIDKRYIEVTKANGEDFINVAGG 424
GG+ + R GEA V+F + R+ ALK+ K ++ RY+E+ +A+ + + G
Sbjct: 523 GGIYFVNNGLDRPKGEAFVQFSSVDERNDALKKKDKLYMGSRYVELFEASEAEVSALLGS 582
Query: 425 N-------------------------NNEAQAFLT-----RGAQV--------------- 439
N N ++ LT RG
Sbjct: 583 NLCSTITSAASSIANSSSAKSTFSNPNTKSNELLTWESVGRGWDASSWKSNIPKSHIIPN 642
Query: 440 -IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+RMRGLP+ T + FF +V+ G + + G+ +G+A+V F EE
Sbjct: 643 RTVRMRGLPFRATISDIQFFFSDFHITESDVVLGFDKM-------GRPSGEAWVTFGTEE 695
Query: 499 EADKALSKHKES-IGIRYIELFRST 522
EA A+S+ + + IG RYIELF T
Sbjct: 696 EARNAVSQLQHAHIGKRYIELFLCT 720
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E +L FL + ++ VH V N QG+P GEAF+Q+ S A +L + G
Sbjct: 269 EDVLNFLE--GAQVIPCAVHFVLNQQGKPRGEAFVQLLSVDDVNRALELHRQ---VLG-- 321
Query: 123 QRYIEVFQCSGEDMNLVL---NGVLPPTSPAISPVGKTLLSPGMLPHSSQPLY 172
RYIEVF+ + ++M+ VL NG S +++P +T S S+P +
Sbjct: 322 HRYIEVFKSTPQEMSTVLSRQNG----RSTSLAPFSRTTYSNVSSIDDSKPFF 370
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDM 136
G+H+V N G P GEAF++ SE + A Q RH + M GK RYIE+F+ S +M
Sbjct: 403 GIHIVQNQDGHPIGEAFVEFASEDALNKALQ-RHKQMM--GK--RYIELFRSSLMEM 454
>gi|347968776|ref|XP_312018.5| AGAP002892-PA [Anopheles gambiae str. PEST]
gi|333467847|gb|EAA08189.6| AGAP002892-PA [Anopheles gambiae str. PEST]
Length = 589
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG 436
R+ GEA +R Q R+ A R+K I RYIE A E F +A +E ++
Sbjct: 92 RQTGEAYIRVPTQADRNKAFSRNKQTIGHRYIEFFNATEEQF-EMALQEMDEGES----- 145
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+++MRGLP+ T V FF+ T + +G G+L + G+A+G+A V F
Sbjct: 146 GGPVVKMRGLPWTSTKDDVKAFFQGLT-----IKNGYNGILLLLDNLGRASGEAIVEFAT 200
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
E +A+ A+ KHKE IG RYIELFRS T E+++ + +
Sbjct: 201 EADAETAMGKHKEKIGNRYIELFRSNTGEMRRAEKRMRRM 240
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRG+P+ C + + DFF C V + K+P G+ GDA+ FE +EEA
Sbjct: 483 VHMRGMPFSCDEQDMYDFFMPLRPVKCVVQ-----MNSRKRPSGE--GDAY--FETKEEA 533
Query: 501 DKALSKHKESIGIRYIELF 519
KA+ K KE +G RYIELF
Sbjct: 534 IKAMRKDKEKMGSRYIELF 552
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA-TGDAFVLFEKEEE 499
+R+RGLP+ T ++ F N++ V P K TG+A++ + +
Sbjct: 56 VRLRGLPWSITEDEIRSFLHG-----VNILH----VHICFHPQTKRQTGEAYIRVPTQAD 106
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+KA S++K++IG RYIE F +T + + L + E
Sbjct: 107 RNKAFSRNKQTIGHRYIEFFNATEEQFEMALQEMDE 142
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G G+ L L GR +GEAIV F + + A+ +HK I RYIE+ ++N
Sbjct: 176 GYNGILLLLDNLGRASGEAIVEFATEADAETAMGKHKEKIGNRYIELFRSN 226
>gi|148688440|gb|EDL20387.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_b [Mus
musculus]
Length = 460
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 50 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 109
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 110 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 157
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 158 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 203
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV E E+E
Sbjct: 23 VVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDE 77
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 78 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 123
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 35 AEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 89
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 90 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 122
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 302 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 352
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 353 VAAMAKDKANMQHRYVELFLNSTA 376
>gi|355757549|gb|EHH61074.1| Heterogeneous nuclear ribonucleoprotein H2 [Macaca fascicularis]
Length = 449
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSNEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|62078769|ref|NP_001014041.1| heterogeneous nuclear ribonucleoprotein H2 [Rattus norvegicus]
gi|81910860|sp|Q6AY09.1|HNRH2_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|50927747|gb|AAH79240.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Rattus norvegicus]
gi|149055432|gb|EDM07016.1| similar to Murine homolog of human ftp-3, isoform CRA_a [Rattus
norvegicus]
gi|149055433|gb|EDM07017.1| similar to Murine homolog of human ftp-3, isoform CRA_a [Rattus
norvegicus]
Length = 449
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 AEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
>gi|353232935|emb|CCD80290.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 497
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + GR NGEA + ++ + A+ H H+ +RYIEV + ED N G
Sbjct: 31 GKRGIYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVFDSCSEDLNNAMG 90
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + ++R+RGLPY+ K++ FF G E + N G+ +
Sbjct: 91 CRPYHS----SNRREHVVRLRGLPYDTEKKEIFAFFN-GLEIAPN------GIGLLVDHM 139
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
G+ TG+A+V F E +A KH E IG RYIE+F ST E + + ME+ ++ S
Sbjct: 140 GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIFESTMMEANMTIQRQMEINQSRS 197
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ A +I FF + C + G+ G+ F + +G++ G+AF+ E +++
Sbjct: 4 VVRIRGLPFSANADDIISFF-----HDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDD 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA++ H + +G RYIE+F S + ++ NN + +
Sbjct: 59 KQKAMAHHNQHLGRRYIEVFDSCSEDL-------------------NNAMGCR------- 92
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P H +S R+ +RLRGLPY+ + FF G
Sbjct: 93 --------PYH--SSNRREHVVRLRGLPYDTEKKEIFAFFNG 124
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 25/91 (27%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTE--------NSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+RMRGLPY T K+ ID F + + N+ N + TG+A V
Sbjct: 299 VRMRGLPYSAT-KEDIDRFLSPLQPVNIRMRFNAAN----------------RPTGEAIV 341
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTT 523
F +EA +A+ K +E IG RYIELF ++T
Sbjct: 342 DFASHDEAKEAMKKDREKIGPRYIELFLAST 372
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ I+ F + +G++ S G+ +GEAFI+++S+ A HN+++
Sbjct: 16 ADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDK-QKAMAHHNQHL---- 70
Query: 122 KQRYIEVFQCSGEDMNLVL 140
+RYIEVF ED+N +
Sbjct: 71 GRRYIEVFDSCSEDLNNAM 89
>gi|9845253|ref|NP_063921.1| heterogeneous nuclear ribonucleoprotein H2 [Mus musculus]
gi|354474917|ref|XP_003499676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Cricetulus griseus]
gi|354474919|ref|XP_003499677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Cricetulus griseus]
gi|46577330|sp|P70333.1|HNRH2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|1666700|gb|AAB47243.1| Murine homolog of human ftp-3 [Mus musculus]
gi|13529467|gb|AAH05461.1| Hnrph2 protein [Mus musculus]
gi|26346655|dbj|BAC36976.1| unnamed protein product [Mus musculus]
gi|74139495|dbj|BAE40886.1| unnamed protein product [Mus musculus]
gi|74207684|dbj|BAE40087.1| unnamed protein product [Mus musculus]
gi|74211079|dbj|BAE37634.1| unnamed protein product [Mus musculus]
gi|148688439|gb|EDL20386.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_a [Mus
musculus]
gi|148688441|gb|EDL20388.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_a [Mus
musculus]
gi|344238071|gb|EGV94174.1| Heterogeneous nuclear ribonucleoprotein H2 [Cricetulus griseus]
Length = 449
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 AEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
>gi|298710505|emb|CBJ25569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 670
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 13/168 (7%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ + L+ GR +GEA V F +E ALKR K I +R+I++ +A + ++ GG
Sbjct: 170 GIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGG 229
Query: 427 NEAQ----AFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
+ +F T + ++RMRGLP+E T Q+ FF+ NV E + V
Sbjct: 230 KKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDG-----INVK--ESNIFIVT 282
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+PDGKA+G+AFVLF E EA+KAL K KE +G R+I+LF + + Q
Sbjct: 283 RPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQ 330
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 380 GEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQV 439
GEA V+ ++ + ALK+ ++ I +RYIEV +++ ED + ++ ++ G +
Sbjct: 84 GEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHAL--DDVSSKGHGDGGYKG 141
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRGLP+ + +FF+ + ++G+ DG+ +G+A+V+FE EE
Sbjct: 142 VVRMRGLPWSANEGDIRNFFDG-------IAIEKDGIHVTLNRDGRPSGEAYVVFETEEA 194
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
A +AL + K+ IG R+I++F +T EV S
Sbjct: 195 AKEALKRDKDKIGERWIDIFEATKGEV----------------------YSMTGGGGKKG 232
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
Q V + +G +R+RGLP+EA + FF G
Sbjct: 233 DQGGVSFDTTDSAYTG----VVRMRGLPFEATKSQIRAFFDG 270
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGGNNNEAQAFLT 434
G+ +GEA V F + + AL + K + R+I++ N G + V G A+
Sbjct: 286 GKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAE 345
Query: 435 -RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
RG ++RMRGLP+ +++ FF V E GV V D + TG+++VL
Sbjct: 346 FRG---VLRMRGLPFASGVEEIRTFFRG-----YKVQ--EHGVFVVNGGDWRPTGESYVL 395
Query: 494 FEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
F+ E+EA++A K+ IG R+IELFRST ++ ++ L + +
Sbjct: 396 FDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLG-----MERGGAMYGR 450
Query: 553 QPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
+PM C++LRGLP+
Sbjct: 451 EPMT-----------------------CVKLRGLPF 463
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 45/161 (27%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ +RGLP+ + K+++DFF MD E+G + + + G+A+V + E +
Sbjct: 48 VHLRGLPWNASTKELVDFFAP--------MDVEDGDIHLVH---NSRGEAYVKLKNESDL 96
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL K + +IG RYIE+FRS+ +V+ L + ++S +G
Sbjct: 97 ETALKKDRNTIGRRYIEVFRSSIEDVEHAL---------DDVSSKGHG------------ 135
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
G K +R+RGLP+ A + FF G
Sbjct: 136 -------------DGGYKGVVRMRGLPWSANEGDIRNFFDG 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGGN 425
GV + R GE+ V F ++ + A K K I R+IE+ ++ D +
Sbjct: 377 GVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRS 436
Query: 426 N----NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
A R +++RGLP+ T + FFE V+ G K
Sbjct: 437 TVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEG-----LTVI----GSFICKD 487
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+ TG+ FV F ++ A+S+++ES+ RY+E+F ++ +V Q
Sbjct: 488 VMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQ 534
>gi|194219511|ref|XP_001497574.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Equus
caballus]
Length = 456
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 20/198 (10%)
Query: 338 VALCPLVQNIWLSLLLNTI------PGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEH 391
V+ P + + LLN++ P + G G+ + GR +GEA V ++
Sbjct: 14 VSAAPAGPRLRSARLLNSVLTVVFFPDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDE 73
Query: 392 RDMALKRHKHHIDKRYIEVTKANG--EDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYE 449
+ALK+ + + RY+EV K+N D++ G N+ A +R+RGLP+
Sbjct: 74 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTA-----NDGFVRLRGLPFG 128
Query: 450 CTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKE 509
C+ ++++ FF +G E N G+ G++TG+AFV F +E A+KAL KHKE
Sbjct: 129 CSKEEIVQFF-SGLEIVPN------GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKE 181
Query: 510 SIGIRYIELFRSTTAEVQ 527
IG RYIE+F+S+ AEV+
Sbjct: 182 RIGHRYIEIFKSSRAEVR 199
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
C + +G +G+ F+ +G+ +G+AFV E E+E AL K +E++G RY+E+F+S E+
Sbjct: 41 CKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEM 100
Query: 527 QQVLNKTMELPKNNSLTSSNNGL 549
VL T NS ++N+G
Sbjct: 101 DWVLKHT----GPNSPDTANDGF 119
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 298 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 348
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 349 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 402
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 48 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 102
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 103 VLKHT-GPNSPDTANDG 118
>gi|327265516|ref|XP_003217554.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Anolis
carolinensis]
Length = 490
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V +E ALK+ + + RY+EV K+N D++
Sbjct: 69 GSSGVRFIYTREGRPSGEAFVELETEEDVKSALKKDRETMGHRYVEVFKSNNVEMDWVLK 128
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 129 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 176
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 177 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 222
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C +++G GV F+ +G+ +G+AFV E
Sbjct: 38 GEGYVVKVRGLPWSCSADEVQRFF-----SECKILNGSSGVRFIYTREGRPSGEAFVELE 92
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
EE+ AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 93 TEEDVKSALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 142
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 314 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 364
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK K ++ RY+ELF ++T
Sbjct: 365 VAAMSKDKANMQHRYVELFLNST 387
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GV +Y +G+PSGEAF+++++E + + L+ +R + RY+EVF+ + +M+ V
Sbjct: 72 GVRFIYTREGRPSGEAFVELETEED--VKSALKKDRETM---GHRYVEVFKSNNVEMDWV 126
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 127 LKHT-GPNSPDTANDG 141
>gi|350529357|ref|NP_001121205.2| G-rich RNA sequence binding factor 1 [Xenopus laevis]
Length = 440
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 42/188 (22%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + G+ G+A++ F E A+++HK ++ +RY+EV + N
Sbjct: 122 GTDGVHFIFNRDGKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFEMN--------- 172
Query: 424 GNNNEAQAFLTRG------------------------AQVIIRMRGLPYECTAKQVIDFF 459
EA++ L R + I+R+RGLPY C+ + +I FF
Sbjct: 173 --QKEAESLLNRMHSALSPTRPSSMSLSPQSSMASPPSDGIVRLRGLPYSCSEQDIIHFF 230
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ ++ D EG+ FV G+ +G+AFV F +E AD+AL KHK+ IG RYIE+F
Sbjct: 231 -----SGLDIAD--EGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF 283
Query: 520 RSTTAEVQ 527
S +VQ
Sbjct: 284 PSRRNDVQ 291
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 28/164 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R+RGLP+ CTA V++FF+ NV +G +GV F+ DGK GDA + FE E+
Sbjct: 95 IVRVRGLPWSCTADDVLNFFD-----DSNVRNGTDGVHFIFNRDGKPRGDAVIEFESAED 149
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA+ +HK+ +G RY+E+F E + +LN+ +S S S S +
Sbjct: 150 VQKAVEQHKKYMGQRYVEVFEMNQKEAESLLNRM------HSALSPTRPSSMSLSPQSSM 203
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
A P + +RLRGLPY C DI FF G
Sbjct: 204 ASPPSDGI-------------VRLRGLPYS--CSEQDIIHFFSG 232
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 44 VLITSQYKEPIQGF-KKVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSE 102
+ IT+ + ++G + +L F + GVH ++N G+P G+A I+ +S
Sbjct: 88 IKITTMFIVRVRGLPWSCTADDVLNFFDDSNVRNGTDGVHFIFNRDGKPRGDAVIEFESA 147
Query: 103 HSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
A + +H + M QRY+EVF+ + ++ +LN + SP
Sbjct: 148 EDVQKAVE-QHKKYM----GQRYVEVFEMNQKEAESLLNRMHSALSP 189
>gi|384946772|gb|AFI36991.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
Length = 449
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+
Sbjct: 290 CVHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHED 340
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A++K K ++ RY+ELF ++TA
Sbjct: 341 AVAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|169641981|gb|AAI60694.1| LOC100158276 protein [Xenopus laevis]
Length = 348
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 61/269 (22%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + G+ G+A++ F E A+++HK ++ +RY+EV + N
Sbjct: 30 GTDGVHFIFNRDGKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFEMN--------- 80
Query: 424 GNNNEAQAFLTRG------------------------AQVIIRMRGLPYECTAKQVIDFF 459
EA++ L R + I+R+RGLPY C+ + +I FF
Sbjct: 81 --QKEAESLLNRMHSALSPTRPSSMSLSPQSSMASPPSDGIVRLRGLPYSCSEQDIIHFF 138
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ ++ D EG+ FV G+ +G+AFV F +E AD+AL KHK+ IG RYIE+F
Sbjct: 139 -----SGLDIAD--EGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF 191
Query: 520 RSTTAEVQQV--------------LNKTMELPKNNSLTSSNNGLSAQQPMLSHL----AQ 561
S +VQ K + P +N + +++ L + P H+ +
Sbjct: 192 PSRRNDVQTARFPFRRRKGVTFAPTIKDLYDP-DNCINNTSKDLLSDVPENGHINDYVKE 250
Query: 562 VPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ + H T + I +RGLP+ A
Sbjct: 251 MSAKSVDVHDFTVMSPVHDIHIRGLPFHA 279
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 28/164 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R+RGLP+ CTA V++FF+ NV +G +GV F+ DGK GDA + FE E+
Sbjct: 3 IVRVRGLPWSCTADDVLNFFD-----DSNVRNGTDGVHFIFNRDGKPRGDAVIEFESAED 57
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA+ +HK+ +G RY+E+F E + +LN+ +S S S S +
Sbjct: 58 VQKAVEQHKKYMGQRYVEVFEMNQKEAESLLNRM------HSALSPTRPSSMSLSPQSSM 111
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
A P + +RLRGLPY C DI FF G
Sbjct: 112 ASPPSDGI-------------VRLRGLPYS--CSEQDIIHFFSG 140
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L F + GVH ++N G+P G+A I+ +S A + +H + M
Sbjct: 15 ADDVLNFFDDSNVRNGTDGVHFIFNRDGKPRGDAVIEFESAEDVQKAVE-QHKKYM---- 69
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
QRY+EVF+ + ++ +LN + SP
Sbjct: 70 GQRYVEVFEMNQKEAESLLNRMHSALSP 97
>gi|383417967|gb|AFH32197.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|410224062|gb|JAA09250.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
Length = 449
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNNVEMDWVLKHT-GPNSPDTANDG 111
>gi|443701155|gb|ELT99751.1| hypothetical protein CAPTEDRAFT_226859 [Capitella teleta]
Length = 390
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 32/182 (17%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN--------- 414
G G+ L + GR +GEA + +E AL++ KHH+ +RYIE +++
Sbjct: 45 GRSGIHLTYTKDGRPSGEAYIELASEEDVAKALEKDKHHMGRRYIEGMQSSLYLIYNHVD 104
Query: 415 --GEDFINVAGGN----NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
E + +G N NN+A +IR+RGLP+ C+ ++V FF +G E N
Sbjct: 105 LEMEWMVKRSGPNQVMGNNDA----------VIRLRGLPFGCSKEEVAHFF-SGLEIVPN 153
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
G+ ++ G++TGDAFV F ++ A++A KHKE IG RYIE+F+S+ E++
Sbjct: 154 ------GITLMQDGQGRSTGDAFVQFASQDIAERAQQKHKEKIGHRYIEIFKSSLQELRN 207
Query: 529 VL 530
+
Sbjct: 208 SM 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 38/179 (21%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG ++ + F I+R+RGLP+ + +V +F EA N+M G G+
Sbjct: 7 GGGDDRDEGF-------IVRIRGLPWSASHDEVANFLEA----DVNIMGGRSGIHLTYTK 55
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
DG+ +G+A++ EE+ KAL K K +G RYIE +S+ + ++ ME S
Sbjct: 56 DGRPSGEAYIELASEEDVAKALEKDKHHMGRRYIEGMQSSLYLIYNHVDLEMEWMVKRS- 114
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P ++ G IRLRGLP+ + FF G
Sbjct: 115 ------------------------GPNQVM--GNNDAVIRLRGLPFGCSKEEVAHFFSG 147
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 441 IRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+ MRGLP++ +++FF+ A + + M PDGKA+G A V F +
Sbjct: 272 VHMRGLPFQAAEDDIVEFFKPLAPVNIAIHYM-----------PDGKASGQADVDFATHQ 320
Query: 499 EADKALSKHKESIGIRYIELFRSTT 523
EA +A+S+ +ES+ RYIELF ++
Sbjct: 321 EASEAMSRDRESMEHRYIELFLKSS 345
>gi|432101976|gb|ELK29797.1| Heterogeneous nuclear ribonucleoprotein H2 [Myotis davidii]
Length = 449
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|256090135|ref|XP_002581069.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353232933|emb|CCD80288.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 338
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + GR NGEA + ++ + A+ H H+ +RYIEV + ED N G
Sbjct: 31 GKRGIYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVFDSCSEDLNNAMG 90
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + ++R+RGLPY+ K++ FF G E + N G+ +
Sbjct: 91 CRPYHS----SNRREHVVRLRGLPYDTEKKEIFAFFN-GLEIAPN------GIGLLVDHM 139
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
G+ TG+A+V F E +A KH E IG RYIE+F ST E + + ME+ ++ S
Sbjct: 140 GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIFESTMMEANMTIQRQMEINQSRS 197
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ A +I FF + C + G+ G+ F + +G++ G+AF+ E +++
Sbjct: 4 VVRIRGLPFSANADDIISFF-----HDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDD 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA++ H + +G RYIE+F S + ++ NN + +
Sbjct: 59 KQKAMAHHNQHLGRRYIEVFDSCSEDL-------------------NNAMGCR------- 92
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P H +S R+ +RLRGLPY+ + FF G
Sbjct: 93 --------PYH--SSNRREHVVRLRGLPYDTEKKEIFAFFNG 124
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ I+ F + +G++ S G+ +GEAFI+++S+ A HN+++
Sbjct: 16 ADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDK-QKAMAHHNQHL---- 70
Query: 122 KQRYIEVFQCSGEDMNLVL 140
+RYIEVF ED+N +
Sbjct: 71 GRRYIEVFDSCSEDLNNAM 89
>gi|74007970|ref|XP_861916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Canis lupus familiaris]
gi|345807788|ref|XP_862053.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 7
[Canis lupus familiaris]
Length = 449
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|348570626|ref|XP_003471098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Cavia
porcellus]
Length = 449
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|53127638|emb|CAG31148.1| hypothetical protein RCJMB04_2m14 [Gallus gallus]
Length = 492
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++ G
Sbjct: 72 GIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTG 131
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N+ A +R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 132 PNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQG 179
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 180 RSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 222
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 42 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 96
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 97 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 142
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 314 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 364
Query: 501 DKALSKHKESIGIRYIELF 519
A+SK K ++ RY+ELF
Sbjct: 365 VAAMSKDKANMQHRYVELF 383
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 72 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM---GHRYVEVFKSNNVEMDWV 126
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 127 LKHT-GPNSPDTANDG 141
>gi|410989009|ref|XP_004000762.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Felis catus]
Length = 432
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|395861473|ref|XP_003803009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Otolemur
garnettii]
Length = 432
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|301788126|ref|XP_002929479.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Ailuropoda melanoleuca]
gi|344306831|ref|XP_003422087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Loxodonta africana]
Length = 432
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|288806582|ref|NP_001165773.1| G-rich RNA sequence binding factor 1 [Xenopus (Silurana)
tropicalis]
gi|189442327|gb|AAI67701.1| Unknown (protein for MGC:186196) [Xenopus (Silurana) tropicalis]
Length = 348
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 42/188 (22%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + G+ G+A++ F E A+++HK ++ +RY+EV + N
Sbjct: 30 GTEGVHFIFNRDGKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFEMN--------- 80
Query: 424 GNNNEAQAFLTRG------------------------AQVIIRMRGLPYECTAKQVIDFF 459
EA++ L R + ++R+RGLPY C+ + +I FF
Sbjct: 81 --QKEAESLLNRMHSALSPTRPSSMSLSPQSSMASPPSDGVVRLRGLPYSCSEQDIIHFF 138
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ ++ D EG+ FV G+ +G+AFV F +E AD+AL KHK+ IG RYIE+F
Sbjct: 139 -----SGLDIAD--EGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF 191
Query: 520 RSTTAEVQ 527
S E+Q
Sbjct: 192 PSRRNEIQ 199
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 28/164 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R+RGLP+ CTA V++FF NV +G EGV F+ DGK GDA + FE E+
Sbjct: 3 IVRVRGLPWSCTADDVLNFF-----GDSNVRNGTEGVHFIFNRDGKPRGDAVIEFESAED 57
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA+ +HK+ +G RY+E+F E + +LN+ +S S S S +
Sbjct: 58 VQKAVEQHKKYMGQRYVEVFEMNQKEAESLLNRM------HSALSPTRPSSMSLSPQSSM 111
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
A P + G +RLRGLPY C DI FF G
Sbjct: 112 ASPP---------SDGV----VRLRGLPYS--CSEQDIIHFFSG 140
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L F G+ +GVH ++N G+P G+A I+ +S A + +H + M
Sbjct: 15 ADDVLNFFGDSNVRNGTEGVHFIFNRDGKPRGDAVIEFESAEDVQKAVE-QHKKYM---- 69
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
QRY+EVF+ + ++ +LN + SP
Sbjct: 70 GQRYVEVFEMNQKEAESLLNRMHSALSP 97
>gi|326928641|ref|XP_003210484.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Meleagris gallopavo]
Length = 477
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++ G
Sbjct: 57 GIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTG 116
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N+ A +R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 117 PNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQG 164
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 165 RSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 207
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 27 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 81
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 82 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 127
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 299 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 349
Query: 501 DKALSKHKESIGIRYIELF 519
A+SK K ++ RY+ELF
Sbjct: 350 VAAMSKDKANMQHRYVELF 368
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 57 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM---GHRYVEVFKSNNVEMDWV 111
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 112 LKHT-GPNSPDTANDG 126
>gi|431895711|gb|ELK05132.1| Heterogeneous nuclear ribonucleoprotein H2 [Pteropus alecto]
Length = 422
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 12 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 71
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 72 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 119
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 120 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 165
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ C + +G G+ F+ +G+ +G+AFV E E+E AL K +E++G RY+E+F+S +
Sbjct: 5 SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSV 64
Query: 525 EVQQVLNKTMELPKNNSLTSSNNGL 549
E+ VL T NS ++N+G
Sbjct: 65 EMDWVLKHT----GPNSPDTANDGF 85
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 264 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 314
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 315 VAAMAKDKANMQHRYVELFLNSTA 338
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 15 GIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNSVEMDWV 69
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 70 LKHT-GPNSPDTANDG 84
>gi|149755198|ref|XP_001493828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Equus
caballus]
gi|291393212|ref|XP_002713068.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Oryctolagus
cuniculus]
gi|291408077|ref|XP_002720410.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Oryctolagus cuniculus]
gi|281341597|gb|EFB17181.1| hypothetical protein PANDA_019663 [Ailuropoda melanoleuca]
Length = 449
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|45383173|ref|NP_989827.1| heterogeneous nuclear ribonucleoprotein H [Gallus gallus]
gi|33521618|gb|AAQ20009.1| heterogeneous nuclear ribonucleoprotein H1-like protein [Gallus
gallus]
Length = 519
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++ G
Sbjct: 92 GIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTG 151
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N+ A +R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 152 PNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQG 199
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 200 RSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 242
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 62 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 116
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 117 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 162
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 341 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 391
Query: 501 DKALSKHKESIGIRYIELF 519
A+SK K ++ RY+ELF
Sbjct: 392 VAAMSKDKANMQHRYVELF 410
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 92 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM---GHRYVEVFKSNNVEMDWV 146
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 147 LKHT-GPNSPDTANDG 161
>gi|126290596|ref|XP_001369385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Monodelphis
domestica]
Length = 449
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GASGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SECKIQNGASGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ + F E G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVQRFFSECKIQNGASGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNNVEMDWVLKHT-GPNSPDTANDG 111
>gi|256090133|ref|XP_002581068.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353232934|emb|CCD80289.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 386
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + GR NGEA + ++ + A+ H H+ +RYIEV + ED N G
Sbjct: 31 GKRGIYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVFDSCSEDLNNAMG 90
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + ++R+RGLPY+ K++ FF G E + N G+ +
Sbjct: 91 CRPYHS----SNRREHVVRLRGLPYDTEKKEIFAFFN-GLEIAPN------GIGLLVDHM 139
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
G+ TG+A+V F E +A KH E IG RYIE+F ST E + + ME+ N
Sbjct: 140 GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIFESTMMEANMTIQRQMEI---NQSR 196
Query: 544 SSNNG 548
SS G
Sbjct: 197 SSGRG 201
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ A +I FF + C + G+ G+ F + +G++ G+AF+ E +++
Sbjct: 4 VVRIRGLPFSANADDIISFF-----HDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDD 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA++ H + +G RYIE+F S + ++ NN + +
Sbjct: 59 KQKAMAHHNQHLGRRYIEVFDSCSEDL-------------------NNAMGCR------- 92
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P H +S R+ +RLRGLPY+ + FF G
Sbjct: 93 --------PYH--SSNRREHVVRLRGLPYDTEKKEIFAFFNG 124
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 25/91 (27%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTE--------NSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+RMRGLPY T K+ ID F + + N+ N + TG+A V
Sbjct: 299 VRMRGLPYSAT-KEDIDRFLSPLQPVNIRMRFNAAN----------------RPTGEAIV 341
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTT 523
F +EA +A+ K +E IG RYIELF ++T
Sbjct: 342 DFASHDEAKEAMKKDREKIGPRYIELFLAST 372
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ I+ F + +G++ S G+ +GEAFI+++S+ A HN+++
Sbjct: 16 ADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDK-QKAMAHHNQHL---- 70
Query: 122 KQRYIEVFQCSGEDMNLVL 140
+RYIEVF ED+N +
Sbjct: 71 GRRYIEVFDSCSEDLNNAM 89
>gi|417401138|gb|JAA47465.1| Putative splicing factor hnrnp-f [Desmodus rotundus]
Length = 449
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|426257857|ref|XP_004022538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Ovis aries]
gi|146231796|gb|ABQ12973.1| heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|296471005|tpg|DAA13120.1| TPA: heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|440901707|gb|ELR52599.1| Heterogeneous nuclear ribonucleoprotein H2 [Bos grunniens mutus]
Length = 449
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|115496520|ref|NP_001069476.1| heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|109892458|sp|Q3SZF3.1|HNRH2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|74354329|gb|AAI02895.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Bos taurus]
Length = 449
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|194744433|ref|XP_001954699.1| GF16612 [Drosophila ananassae]
gi|190627736|gb|EDV43260.1| GF16612 [Drosophila ananassae]
Length = 600
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 21/169 (12%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A +
Sbjct: 80 GSQGIHLVTSRVDGKNTGEAYVEVSTQEDVEEARKLNKASMGHRYIEVFTATPK------ 133
Query: 423 GGNNNEAQAFLTR----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
EA+ + + G ++++RGLPY T +Q+ +FF +G E + EG+LF
Sbjct: 134 -----EAKEAMRKISGHGNAFVVKLRGLPYAVTEQQIEEFF-SGLE----IKTDREGILF 183
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE++
Sbjct: 184 VMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMK 232
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEE 498
IR+RGLP+ T K+++DF E + NV +G +G+ L + DGK TG+A+V +E
Sbjct: 53 FIRLRGLPWSATHKEILDFLE-----NVNVTNGSQGIHLVTSRVDGKNTGEAYVEVSTQE 107
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ ++A +K S+G RYIE+F +T E ++ + K
Sbjct: 108 DVEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 141
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 488 IHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 538
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 539 QMAMKRHREQMGSRYIELF 557
>gi|126328016|ref|XP_001371380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 468
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N + V
Sbjct: 39 GAAGIHFIYTREGRPSGEAFVELESEDEVTLALKKDRETMGHRYVEVFKSNNIEMDWVL- 97
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ A L + +R+RGLP+ C ++++ FF +G E N G+
Sbjct: 98 --KHTAPNSLDTASDGFVRLRGLPFRCNKEEIVQFF-SGLEIMPN------GITLPVDFQ 148
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ +G+AFV F +E A+KAL KHKE IG RYIE+F+S+ AE Q
Sbjct: 149 GRNSGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSQAEAQ 192
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T+G + ++++RGLP+ C+A + FF + C + +G G+ F+ +G+ +G+AFV
Sbjct: 5 TKGEEGFVVKVRGLPWSCSASDIQQFF-----SECKIQNGAAGIHFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E E+E AL K +E++G RY+E+F+S E+ VL T NSL ++++G
Sbjct: 60 ELESEDEVTLALKKDRETMGHRYVEVFKSNNIEMDWVLKHTAP----NSLDTASDGF 112
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + DFF + G DG+ TG+A V F E+A
Sbjct: 286 VHMRGLPYKATENDICDFFSPLKPVGAYIEIG---------SDGRVTGEADVEFATHEDA 336
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
A+SK K ++ RYIELF ++T E
Sbjct: 337 VAAMSKDKANMQHRYIELFLNSTTEAD 363
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 42 GIHFIYTREGRPSGEAFVELESEDEVTLA--LKKDRETM---GHRYVEVFKSNNIEMDWV 96
Query: 140 LNGVLP 145
L P
Sbjct: 97 LKHTAP 102
>gi|113951757|ref|NP_001039317.1| G-rich sequence factor 1 [Danio rerio]
gi|112418830|gb|AAI22227.1| Zgc:153305 [Danio rerio]
gi|182890996|gb|AAI64250.1| Zgc:153305 protein [Danio rerio]
Length = 301
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 314 LPKF-PVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCL 372
LP++ P + NQ ++ + G P + ++I I G G+ GV +
Sbjct: 21 LPEYTPGSEENQAKELFIVQAKGLPWSCT--AEDIMSFFSECRIRG-----GVNGVHILY 73
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF 432
+ +G+ +G+A + +E AL +H+H+ R IEV + +D + + +
Sbjct: 74 NKYGKPSGQAFIELEHEEDVGKALDQHRHYPRDRLIEVREVTNKDAEAILKASKERVET- 132
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
++R+RGLPY CT +I FF + +V+ E+GV + GK++GDAFV
Sbjct: 133 -----DTVVRLRGLPYSCTEGDIIRFF-----SGLDVV--EDGVTIILNRRGKSSGDAFV 180
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
F + A+KAL K +E +G RYIE+F P S S N
Sbjct: 181 EFATKAMAEKALKKDREILGNRYIEIF-----------------PAMKSAIPSQNRSWQN 223
Query: 553 QPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
+ + A+ P + + K+ I +RGLP++A + FF
Sbjct: 224 DRVFTPRAEDP------PLRNTAVTKNVIHMRGLPFDAKAEDIVKFFA 265
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
GV + L+ G+ +G+A V F + + ALK+ + + RYIE+ A +
Sbjct: 163 GVTIILNRRGKSSGDAFVEFATKAMAEKALKKDREILGNRYIEIFPAMKSAIPSQNRSWQ 222
Query: 427 NEAQAFLTRG----------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
N+ + F R + +I MRGLP++ A+ ++ FF +M V
Sbjct: 223 ND-RVFTPRAEDPPLRNTAVTKNVIHMRGLPFDAKAEDIVKFF-----APVRLMK----V 272
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKALS 505
+ P+GK TG+A F+ E+A A+S
Sbjct: 273 VVEFGPEGKPTGEAEAYFKTHEDAVLAMS 301
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E I+ F E GVH++YN G+PSG+AFI++ EH + L +R+
Sbjct: 50 AEDIMSFFSECRIRGGVNGVHILYNKYGKPSGQAFIEL--EHEEDVGKALDQHRHY---P 104
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
+ R IEV + + +D +L
Sbjct: 105 RDRLIEVREVTNKDAEAILKA 125
>gi|395504896|ref|XP_003756782.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sarcophilus
harrisii]
Length = 471
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 38 GASGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 98 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 146 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 191
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 452 AKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESI 511
AK I FF C + +G G+ F+ +G+ +G+AFV E E+E AL K +E++
Sbjct: 23 AKVTIGFF-----TECKIQNGASGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETM 77
Query: 512 GIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 78 GHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 111
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 290 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 340
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 341 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 394
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 41 GIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDWV 95
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 96 LKHT-GPNSPDTANDG 110
>gi|256090131|ref|XP_002581067.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 472
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + GR NGEA + ++ + A+ H H+ +RYIEV + ED N G
Sbjct: 31 GKRGIYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVFDSCSEDLNNAMG 90
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + ++R+RGLPY+ K++ FF G E + N G+ +
Sbjct: 91 CRPYHS----SNRREHVVRLRGLPYDTEKKEIFAFFN-GLEIAPN------GIGLLVDHM 139
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
G+ TG+A+V F E +A KH E IG RYIE+F ST E + + ME+ ++ S
Sbjct: 140 GRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIFESTMMEANMTIQRQMEINQSRS 197
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ A +I FF + C + G+ G+ F + +G++ G+AF+ E +++
Sbjct: 4 VVRIRGLPFSANADDIISFF-----HDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDD 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KA++ H + +G RYIE+F S + ++ NN + +
Sbjct: 59 KQKAMAHHNQHLGRRYIEVFDSCSEDL-------------------NNAMGCR------- 92
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P H +S R+ +RLRGLPY+ + FF G
Sbjct: 93 --------PYH--SSNRREHVVRLRGLPYDTEKKEIFAFFNG 124
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+RMRGLPY T K+ ID F + + N+ + F + TG+A V F +EA
Sbjct: 299 VRMRGLPYSAT-KEDIDRFLSPLQ-PVNIR-----MRFNAA--NRPTGEAIVDFASHDEA 349
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
+A+ K +E IG RYIELF ++T
Sbjct: 350 KEAMKKDREKIGPRYIELFLAST 372
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ I+ F + +G++ S G+ +GEAFI+++S+ A HN+++
Sbjct: 16 ADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDK-QKAMAHHNQHL---- 70
Query: 122 KQRYIEVFQCSGEDMNLVL 140
+RYIEVF ED+N +
Sbjct: 71 GRRYIEVFDSCSEDLNNAM 89
>gi|449474971|ref|XP_002195792.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Taeniopygia
guttata]
Length = 419
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++ G
Sbjct: 23 GIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTG 82
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N+ A +R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 83 PNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQG 130
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 131 RSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 173
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 462 GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
G C +++G G+ F+ +G+ +G+AF E EE+ AL K +E++G RY+E+F+S
Sbjct: 10 GRGGDCKILNGALGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKS 69
Query: 522 TTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+ VL T NS ++N+G
Sbjct: 70 NNVEMDWVLKHT----GPNSPDTANDGF 93
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 272 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 322
Query: 501 DKALSKHKESIGIRYIELF 519
A+SK K ++ RY+ELF
Sbjct: 323 VAAMSKDKANMQHRYVELF 341
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 23 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM---GHRYVEVFKSNNVEMDWV 77
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 78 LKHT-GPNSPDTANDG 92
>gi|357517683|ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
gi|355523152|gb|AET03606.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
Length = 290
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 26/185 (14%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN---- 425
L ++ GR +GEA V F + AL+R + ++ +RY+EV + +D+ N G
Sbjct: 113 LLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAGEINYE 172
Query: 426 ---NNEAQA--------FLTRGAQV----IIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
+N+ Q + Q+ I++MRGLP+ T Q+IDFF+ ++
Sbjct: 173 GIYDNDYQGSPPPSRSKRFSDKEQMDYTEILKMRGLPFLVTKSQIIDFFK-----DYKLI 227
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+G V +PDGKATG+A+V F +EA +A+ K K +IG RY+ELF ST E ++
Sbjct: 228 EGR--VHIACRPDGKATGEAYVEFVSPDEAKRAMFKDKMTIGSRYVELFPSTPDEARRAE 285
Query: 531 NKTME 535
+++ +
Sbjct: 286 SRSRQ 290
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++ FF T ++D VL V K G+ +G+AFV+F +
Sbjct: 85 VVRLRGLPFNCTDIDILKFFAGLT-----IVD----VLLVNKS-GRFSGEAFVVFAGAMQ 134
Query: 500 ADKALSKHKESIGIRYIELFR 520
+ AL + ++++G RY+E+FR
Sbjct: 135 VEFALQRDRQNMGRRYVEVFR 155
>gi|296088657|emb|CBI37648.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN--NNEAQAFL 433
GR +GEA V F D AL+R + ++ +RY+EV + +D+ + +++ Q
Sbjct: 93 GRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQDYYHAVASERFSDKDQMEH 152
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T I+++RGLP+ Q+++FF + G++ V +PDGKATG+A+V
Sbjct: 153 TE----ILKLRGLPFSVKKSQILEFF-------GDFELGDDKVHIACRPDGKATGEAYVE 201
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
F EEA KA+ K K +IG RY+ELF ST E ++
Sbjct: 202 FASAEEAKKAMGKDKMTIGSRYVELFPSTPDEARRA 237
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT + FF +++D VL V K G+ +G+A+V+F +
Sbjct: 59 VVRLRGLPFNCTDIDIFKFFAG-----LDIVD----VLLVNKS-GRFSGEAYVVFAGSMQ 108
Query: 500 ADKALSKHKESIGIRYIELFR 520
AD AL + ++++G RY+E+FR
Sbjct: 109 ADFALQRDRQNMGRRYVEVFR 129
>gi|351714509|gb|EHB17428.1| Heterogeneous nuclear ribonucleoprotein H, partial [Heterocephalus
glaber]
Length = 444
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 11 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 70
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 71 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 118
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 119 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 164
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
C + +G +G+ F+ +G+ +G+AFV E E+E AL K +E++G RY+E+F+S E+
Sbjct: 6 CKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEM 65
Query: 527 QQVLNKTMELPKNNSLTSSNNGL 549
VL T NS ++N+G
Sbjct: 66 DWVLKHT----GPNSPDTANDGF 84
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 263 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 313
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 314 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 367
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 13 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 67
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 68 VLKHT-GPNSPDTANDG 83
>gi|313233607|emb|CBY09778.1| unnamed protein product [Oikopleura dioica]
Length = 425
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
V G GV L+ GR NGEA + + A+ + + + RYIE+ KA E+ V
Sbjct: 47 VNGEAGVHFTLTKEGRPNGEAYIELETDADVEKAMIKDRTQLQDRYIEIFKATTEEMDYV 106
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEEGVLFVK 480
E QA + + ++++RG+PY+CT+ ++ F +D GV+ V
Sbjct: 107 L--EKTERQA--NQPWENVVKLRGVPYKCTSDRIRQFLRE--------LDIPAHGVVMVT 154
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNN 540
G+ TG+AFV + E A++AL KHKE I RYIE+F++T AE+ Q +
Sbjct: 155 DARGRNTGEAFVQLKSHEHAEQALLKHKECIDRRYIEVFKATRAEMSQA---------SQ 205
Query: 541 SLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
SL + NG S L V + + +H+ +++RG+P+ A + FF
Sbjct: 206 SLHNHCNGDHYYSQQNSSLKGVGLDGVYRHV---------VQMRGIPFRATEEQVRSFF 255
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA---- 422
GV + A GR GEA V+ EH + AL +HK ID+RYIEV KA + +
Sbjct: 149 GVVMVTDARGRNTGEAFVQLKSHEHAEQALLKHKECIDRRYIEVFKATRAEMSQASQSLH 208
Query: 423 ----GGNNNEAQAFLTRGAQV------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
G + Q +G + +++MRG+P+ T +QV FF E S
Sbjct: 209 NHCNGDHYYSQQNSSLKGVGLDGVYRHVVQMRGIPFRATEEQVRSFFGLDFEIS------ 262
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
V F D + TG A V F E+A+KA+ K KE +G RYIEL
Sbjct: 263 --AVQFEIGADHRPTGRASVAFPTHEDAEKAMKKDKECMGKRYIEL 306
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR+RGLPY C +V++FF + ++++GE GV F +G+ G+A++ E + +
Sbjct: 21 VIRLRGLPYSCCGAEVVEFFA----DIVDIVNGEAGVHFTLTKEGRPNGEAYIELETDAD 76
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+KA+ K + + RYIE+F++TT E+ VL KT
Sbjct: 77 VEKAMIKDRTQLQDRYIEIFKATTEEMDYVLEKT 110
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 365 LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
+ V + A R G A V F E + A+K+ K + KRYIE+ + ++ G
Sbjct: 261 ISAVQFEIGADHRPTGRASVAFPTHEDAEKAMKKDKECMGKRYIELMILSSQNTPIDGIG 320
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N E +L +I MRGLP+ A+ ++ FF + ++D + P G
Sbjct: 321 PNGE---YL-----FMIHMRGLPFRVHARDIVSFF-----DPIPILD----IHLEMGPKG 363
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
F +E +D AL + KE+IG RYIELF
Sbjct: 364 PTGAGQVAFFSAQERSD-ALKRDKENIGDRYIELF 397
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 10/76 (13%)
Query: 71 EFASNIV-----YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRY 125
EF ++IV GVH +G+P+GEA+I+++++ A + + +R + + RY
Sbjct: 38 EFFADIVDIVNGEAGVHFTLTKEGRPNGEAYIELETD--ADVEKAMIKDRTQL---QDRY 92
Query: 126 IEVFQCSGEDMNLVLN 141
IE+F+ + E+M+ VL
Sbjct: 93 IEIFKATTEEMDYVLE 108
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
K + I +FL E +I GV MV +++G+ +GEAF+Q+ S H A L+H +
Sbjct: 130 KCTSDRIRQFLREL--DIPAHGVVMVTDARGRNTGEAFVQLKS-HEHAEQALLKHKECI- 185
Query: 119 FGKKQRYIEVFQCSGEDMN 137
+RYIEVF+ + +M+
Sbjct: 186 ---DRRYIEVFKATRAEMS 201
>gi|397478241|ref|XP_003810461.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Pan
paniscus]
Length = 314
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RY E+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYTEIFKSSRAEVR 192
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|410914042|ref|XP_003970497.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Takifugu
rubripes]
Length = 406
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 14/164 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAG 423
G + + GR +GEA V +E +A+K+ + + RY+EV K+N D++
Sbjct: 36 GAIHFTYTREGRPSGEAFVEMESEEDLKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHT 95
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G N A +IR+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 96 GPNCPGTA-----GDGLIRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDIQ 143
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F ++ A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 144 GRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVR 187
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ +V FF + C +++ + F +G+ +G+AFV E EE+
Sbjct: 7 VVRIRGLPWSCSVDEVQRFF-----SGCKIINNGGAIHFTYTREGRPSGEAFVEMESEED 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
A+ K +E++G RY+E+F+S E+ V+ T
Sbjct: 62 LKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHT 95
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 255 VHMRGLPYRATETDIYNFFSPLNPVRVHIEVG---------PDGRVTGEADVEFATHEDA 305
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 306 VAAMSKDKANMQHRYVELFLNSTA 329
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 81 VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL 140
+H Y +G+PSGEAF++M+SE L ++ +R + RY+EVF+ + +M+ V+
Sbjct: 38 IHFTYTREGRPSGEAFVEMESEED--LKVAVKKDRETM---GHRYVEVFKSNNVEMDWVM 92
Query: 141 NGVLP 145
P
Sbjct: 93 KHTGP 97
>gi|356559210|ref|XP_003547893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Glycine
max]
Length = 264
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 27/186 (14%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN---- 425
L ++ GR +GEA V F + AL+R + ++ +RY+EV + +D+ N
Sbjct: 86 LLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEIKYE 145
Query: 426 ---NNEAQAFL---TRGAQV----------IIRMRGLPYECTAKQVIDFFEAGTENSCNV 469
+N+ Q +R + I++MRGLP++ T Q+++FF+ +
Sbjct: 146 GIYDNDYQGSSPPPSRSKRFNDKDQMECTEILKMRGLPFQVTKSQIVEFFK-------DF 198
Query: 470 MDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
E+ V +PDGK+TG+A+V F EEA +A+SK K +IG RY+ELF ST E ++
Sbjct: 199 KLIEDRVHIACRPDGKSTGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDEARRA 258
Query: 530 LNKTME 535
+++ +
Sbjct: 259 ESRSRQ 264
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++ FF T ++D VL V K G+ +G+AFV+F +
Sbjct: 58 VVRLRGLPFNCTDIDILKFFAGLT-----IVD----VLLVNK-SGRFSGEAFVVFAGAMQ 107
Query: 500 ADKALSKHKESIGIRYIELFR 520
+ AL + ++++G RY+E+FR
Sbjct: 108 VEFALQRDRQNMGRRYVEVFR 128
>gi|291243063|ref|XP_002741419.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H1-like
[Saccoglossus kowalevskii]
Length = 628
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV--TKANGEDFINVAGG 424
G+ + GR +GE + +E +AL+RH H+ RY+EV +K + D++ G
Sbjct: 126 GIKFTYTREGRPSGECFIELETEEDVKVALERHNDHMGHRYVEVFRSKKSEMDWVIKRSG 185
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N + +R+RGLP+ C+ +++ FF G E N G+ G
Sbjct: 186 PN------AVQDNDGCVRLRGLPFGCSKEEIAQFF-GGLEIVAN------GITLPTDYHG 232
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
++TG+A+V F ++ A+ AL KHKE IG RYIE+F+S+ EV+Q L
Sbjct: 233 RSTGEAYVQFSTKDIAENALGKHKERIGHRYIEIFKSSKEEVRQAL 278
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 41/162 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR RGLP+ TA +V FF+ C + + E G+ F +G+ +G+ F+ E EE+
Sbjct: 96 VIRARGLPWSATADEVRSFFKG-----CKIAETENGIKFTYTREGRPSGECFIELETEED 150
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
AL +H + +G RY+E+FRS +E+ V+ ++ + N+G
Sbjct: 151 VKVALERHNDHMGHRYVEVFRSKKSEMDWVIKRS-----GPNAVQDNDG----------- 194
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 195 --------------------CVRLRGLPFGCSKEEIAQFFGG 216
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ Y +G+PSGE FI++++E +A + RHN +M RY+EVF+ +M+ V
Sbjct: 126 GIKFTYTREGRPSGECFIELETEEDVKVALE-RHNDHM----GHRYVEVFRSKKSEMDWV 180
Query: 140 LNGVLP 145
+ P
Sbjct: 181 IKRSGP 186
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+I MRGLP+ T +++ FF+ ++ + G+ATG+A V F E+
Sbjct: 427 VIHMRGLPFRATDQEIRQFFQPVNPTKVHIQ---------YESGGRATGEADVEFATHED 477
Query: 500 ADKALSKHKESIGIRYIELF 519
A +SK K + RYIELF
Sbjct: 478 AVAGMSKDKAHMQHRYIELF 497
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ L GR GEA V+F ++ + AL +HK I RYIE+ K++ E+ G
Sbjct: 223 GITLPTDYHGRSTGEAYVQFSTKDIAENALGKHKERIGHRYIEIFKSSKEEVRQALG 279
>gi|120538378|gb|AAI29088.1| Hnrph1 protein [Rattus norvegicus]
Length = 429
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|5031753|ref|NP_005511.1| heterogeneous nuclear ribonucleoprotein H [Homo sapiens]
gi|300794637|ref|NP_001180163.1| heterogeneous nuclear ribonucleoprotein H [Bos taurus]
gi|381342476|ref|NP_001244222.1| heterogeneous nuclear ribonucleoprotein H [Homo sapiens]
gi|73970381|ref|XP_857122.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 19
[Canis lupus familiaris]
gi|109080078|ref|XP_001099955.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 7
[Macaca mulatta]
gi|114603795|ref|XP_001150460.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2 [Pan
troglodytes]
gi|291410134|ref|XP_002721348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H1-like
[Oryctolagus cuniculus]
gi|301771512|ref|XP_002921169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Ailuropoda melanoleuca]
gi|311249564|ref|XP_003123691.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sus scrofa]
gi|348551747|ref|XP_003461691.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Cavia
porcellus]
gi|403307005|ref|XP_003944005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Saimiri boliviensis boliviensis]
gi|403307007|ref|XP_003944006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Saimiri boliviensis boliviensis]
gi|410947937|ref|XP_003980698.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Felis catus]
gi|426228702|ref|XP_004008435.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Ovis aries]
gi|1710632|sp|P31943.4|HNRH1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein H, N-terminally processed
gi|347314|gb|AAA91346.1| hnRNP H [Homo sapiens]
gi|12655001|gb|AAH01348.1| HNRPH1 protein [Homo sapiens]
gi|119574192|gb|EAW53807.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_a [Homo
sapiens]
gi|119574193|gb|EAW53808.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_a [Homo
sapiens]
gi|193784895|dbj|BAG54048.1| unnamed protein product [Homo sapiens]
gi|296486243|tpg|DAA28356.1| TPA: heterogeneous nuclear ribonucleoprotein H1 (H) [Bos taurus]
Length = 449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|344246789|gb|EGW02893.1| Heterogeneous nuclear ribonucleoprotein H [Cricetulus griseus]
Length = 415
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 12 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 71
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 72 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 119
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+ N +L
Sbjct: 120 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHKNTPRKL 174
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ C + +G +G+ F+ +G+ +G+AFV E E+E AL K +E++G RY+E+F+S
Sbjct: 5 SDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNV 64
Query: 525 EVQQVLNKTMELPKNNSLTSSNNGL 549
E+ VL T NS ++N+G
Sbjct: 65 EMDWVLKHTGP----NSPDTANDGF 85
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 264 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 314
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 315 VAAMSKDKANMQHRYVELFLNSTA 338
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 14 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 68
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 69 VLKHT-GPNSPDTANDG 84
>gi|10946928|ref|NP_067485.1| heterogeneous nuclear ribonucleoprotein H [Mus musculus]
gi|46396669|sp|O35737.3|HNRH1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein H, N-terminally processed
gi|2253041|emb|CAA74583.1| heterogeneous nuclear ribonucleoprotein H [Mus musculus]
gi|33604202|gb|AAH56224.1| Heterogeneous nuclear ribonucleoprotein H1 [Mus musculus]
gi|37589940|gb|AAH42187.2| Heterogeneous nuclear ribonucleoprotein H1 [Mus musculus]
gi|74149585|dbj|BAE36421.1| unnamed protein product [Mus musculus]
gi|148701754|gb|EDL33701.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_d [Mus
musculus]
gi|149052456|gb|EDM04273.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|395853398|ref|XP_003799198.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Otolemur garnettii]
gi|395853400|ref|XP_003799199.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Otolemur garnettii]
gi|395853402|ref|XP_003799200.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 3
[Otolemur garnettii]
Length = 449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A++V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSAEEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E + F + QG+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 AEEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNNVEMDWVLKHT-GPNSPDTANDG 111
>gi|148886840|sp|Q8VHV7.2|HNRH1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName:
Full=Heterogeneous nuclear ribonucleoprotein H,
N-terminally processed
Length = 449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSEEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIETG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|226487870|emb|CAX75600.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 278
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT- 434
GR NGEA + ++ ++ A+ H H+ +RYIEV + E+ N G ++ F +
Sbjct: 43 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSEELNNAMG-----SRPFSSP 97
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
+ ++R+RGLPY+ K++ FF G E + N G+ + G+ TG+A+V F
Sbjct: 98 NRREHVVRLRGLPYDTEKKEIYAFFN-GLEIAPN------GIGLLVDHMGRCTGEAYVQF 150
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
E +A KH E IG RYIE+F ST E + + +E+ N S +SS + +
Sbjct: 151 TSSESLARAKEKHMEKIGHRYIEIFESTMLEANITIQRQLEI--NQSRSSSGGPMFGRAS 208
Query: 555 MLSHLAQVPVPYLPQ 569
H + Y P+
Sbjct: 209 RDGHPGGMGYCYGPR 223
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 41/164 (25%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++R+RGLP+ A +I+FF+ C + G+ G+ F + P+G++ G+AF+ + +
Sbjct: 2 SFVVRIRGLPFSANADDIINFFK-----DCTIRGGKRGIYFPQGPNGRSNGEAFIELDSK 56
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
++ +KA++ H E +G RYIE+F S + E+ NN++ S +P S
Sbjct: 57 DDKEKAMAHHNEHMGRRYIEVFDSCSEEL------------NNAMGS--------RPFSS 96
Query: 558 HLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P +H+ +RLRGLPY+ + FF G
Sbjct: 97 -------PNRREHV---------VRLRGLPYDTEKKEIYAFFNG 124
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ I+ F + +G++ G+ +GEAFI++DS+ A HN +M
Sbjct: 16 ADDIINFFKDCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDDK-EKAMAHHNEHM---- 70
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
+RYIEVF E++N + G P +SP
Sbjct: 71 GRRYIEVFDSCSEELNNAM-GSRPFSSP 97
>gi|48145673|emb|CAG33059.1| HNRPH1 [Homo sapiens]
Length = 449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSGAEVR 192
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|344265353|ref|XP_003404749.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Loxodonta
africana]
Length = 449
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A++V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSAEEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E + F + QG+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 AEEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDDVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNNVEMDWVLKHT-GPNSPDTANDG 111
>gi|440897190|gb|ELR48939.1| Heterogeneous nuclear ribonucleoprotein H [Bos grunniens mutus]
Length = 472
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|402911169|ref|XP_003918213.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like, partial
[Papio anubis]
Length = 256
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|354486518|ref|XP_003505427.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Cricetulus
griseus]
Length = 447
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 14 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 73
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 74 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 121
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+ N +L
Sbjct: 122 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHKNTPRKL 176
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ C + +G +G+ F+ +G+ +G+AFV E E+E AL K +E++G RY+E+F+S
Sbjct: 7 SDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNV 66
Query: 525 EVQQVLNKTMELPKNNSLTSSNNGL 549
E+ VL T NS ++N+G
Sbjct: 67 EMDWVLKHTGP----NSPDTANDGF 87
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 266 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 316
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 317 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 370
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 16 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 70
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 71 VLKHT-GPNSPDTANDG 86
>gi|441595654|ref|XP_003279600.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Nomascus leucogenys]
Length = 452
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|397477061|ref|XP_003809903.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Pan paniscus]
gi|426351280|ref|XP_004043181.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Gorilla
gorilla gorilla]
Length = 452
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|26353116|dbj|BAC40188.1| unnamed protein product [Mus musculus]
Length = 472
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|441595657|ref|XP_004087258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Nomascus leucogenys]
Length = 472
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|261859020|dbj|BAI46032.1| heterogeneous nuclear ribonucleoprotein H1 [synthetic construct]
Length = 472
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|390459519|ref|XP_002744505.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Callithrix
jacchus]
Length = 472
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|402873628|ref|XP_003919688.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H [Papio anubis]
Length = 472
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|431892769|gb|ELK03202.1| Heterogeneous nuclear ribonucleoprotein H [Pteropus alecto]
Length = 435
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 284 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 334
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 335 VAAMSKDKANMQHRYVELFLNSTA 358
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLK-HTGPNSPDTANDG 111
>gi|148701752|gb|EDL33699.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_b [Mus
musculus]
Length = 485
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 52 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 111
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 112 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 159
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 160 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 205
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 21 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 75
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 76 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 125
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 304 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 354
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 355 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 408
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 54 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 108
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 109 VLKHT-GPNSPDTANDG 124
>gi|147834707|emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
Length = 257
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 27/214 (12%)
Query: 342 PLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFGRRNGEAIVRFIDQEHRDMALKRHK 400
P+V+ L I ++ GL V L ++ GR +GEA V F D AL+R +
Sbjct: 51 PVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDR 110
Query: 401 HHIDKRYIEVTKANGEDF-------INVAGGNNNE---------AQAFLTRGA---QVII 441
++ +RY+EV + +D+ +N G +N+ ++ F + I+
Sbjct: 111 QNMGRRYVEVFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEIL 170
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
++RGLP+ Q+++FF + G++ V +PDGKATG+A+V F EEA
Sbjct: 171 KLRGLPFSVKKSQILEFF-------GDFELGDDKVHIACRPDGKATGEAYVEFASAEEAK 223
Query: 502 KALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
KA+ K K +IG RY+ELF ST E ++ +++ +
Sbjct: 224 KAMGKDKMTIGSRYVELFPSTPDEARRAESRSRQ 257
>gi|119574194|gb|EAW53809.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_b [Homo
sapiens]
Length = 393
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|359476979|ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
vinifera]
Length = 264
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 26/185 (14%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF-------INVA 422
L ++ GR +GEA V F D AL+R + ++ +RY+EV + +D+ +N
Sbjct: 87 LLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQDYYHAVASEVNYE 146
Query: 423 GGNNNE---------AQAFLTRGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
G +N+ ++ F + I+++RGLP+ Q+++FF +
Sbjct: 147 GIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSVKKSQILEFF-------GDFE 199
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G++ V +PDGKATG+A+V F EEA KA+ K K +IG RY+ELF ST E ++
Sbjct: 200 LGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVELFPSTPDEARRAE 259
Query: 531 NKTME 535
+++ +
Sbjct: 260 SRSRQ 264
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT + FF +++D VL V K G+ +G+A+V+F +
Sbjct: 59 VVRLRGLPFNCTDIDIFKFFAG-----LDIVD----VLLVNKS-GRFSGEAYVVFAGSMQ 108
Query: 500 ADKALSKHKESIGIRYIELFR 520
AD AL + ++++G RY+E+FR
Sbjct: 109 ADFALQRDRQNMGRRYVEVFR 129
>gi|281351805|gb|EFB27389.1| hypothetical protein PANDA_010030 [Ailuropoda melanoleuca]
Length = 472
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLK-HTGPNSPDTANDG 111
>gi|380792639|gb|AFE68195.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca mulatta]
Length = 269
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 14/163 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++ G
Sbjct: 42 GIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTG 101
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N+ A +R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 102 PNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQG 149
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 150 RSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAPGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+ V
Sbjct: 42 GIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDWV 96
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 97 LKHT-GPNSPDTANDG 111
>gi|449491253|ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
Length = 256
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 28/219 (12%)
Query: 337 PVALCPLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFGRRNGEAIVRFIDQEHRDMA 395
P P+V+ L I ++ GL V L ++ GR GEA V F + A
Sbjct: 46 PTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFA 105
Query: 396 LKRHKHHIDKRYIEVTKANGEDFIN-VAGGNNNEA-------------QAFLTRGAQV-- 439
L+R + ++ +RY+EV + +D+ N VA N E Q + Q+
Sbjct: 106 LQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEY 165
Query: 440 --IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEEGVLFVKKPDGKATGDAFVLFEK 496
I+++RGLP+ T +I+FF D E+ + +PDGKATG+A+V F
Sbjct: 166 TEILKLRGLPFSVTKSNIIEFF--------GEFDLAEDRIHIASRPDGKATGEAYVEFAS 217
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
EEA +A+SK K +IG RY+ELF ST E ++ +++ +
Sbjct: 218 AEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ 256
>gi|449434084|ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
Length = 263
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 28/219 (12%)
Query: 337 PVALCPLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFGRRNGEAIVRFIDQEHRDMA 395
P P+V+ L I ++ GL V L ++ GR GEA V F + A
Sbjct: 53 PTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFA 112
Query: 396 LKRHKHHIDKRYIEVTKANGEDFIN-VAGGNNNEA-------------QAFLTRGAQV-- 439
L+R + ++ +RY+EV + +D+ N VA N E Q + Q+
Sbjct: 113 LQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEY 172
Query: 440 --IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD-GEEGVLFVKKPDGKATGDAFVLFEK 496
I+++RGLP+ T +I+FF D E+ + +PDGKATG+A+V F
Sbjct: 173 TEILKLRGLPFSVTKSNIIEFF--------GEFDLAEDRIHIASRPDGKATGEAYVEFAS 224
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
EEA +A+SK K +IG RY+ELF ST E ++ +++ +
Sbjct: 225 AEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ 263
>gi|355691923|gb|EHH27108.1| hypothetical protein EGK_17225 [Macaca mulatta]
Length = 472
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKEDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL + +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKEDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKEDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
>gi|432879057|ref|XP_004073431.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 413
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA V +E +A+K+ + + RY+EV K+N D++ G
Sbjct: 37 GIHFTYTREGRPSGEAFVEMETEEDLKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHTG 96
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N A ++R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 97 PNCPETA-----GDGLVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDIQG 144
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ-----QVLNKTMELPKN 539
++TG+AFV F ++ A+KAL KHKE IG RYIE+F+S AEV+ Q M+ P
Sbjct: 145 RSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSCRAEVRTHYEPQRKPMGMQRPSP 204
Query: 540 NSLTSSNNGLSAQQPMLSH----LAQVPVPYLPQHIITSGTRKD-----------CIRLR 584
S G + S+ ++ G D C+ +R
Sbjct: 205 YDRPSGGRGYNMMGRGASYDRMRRGGYGGGGGGGGGVSDGRYGDSGSSFQSTTGHCVHMR 264
Query: 585 GLPYEALCILMDIFF 599
GLPY A + FF
Sbjct: 265 GLPYRATETDIYNFF 279
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ +V FF + C +++ G+ F +G+ +G+AFV E EE+
Sbjct: 7 VVRIRGLPWSCSVDEVQRFF-----SGCKILNNGSGIHFTYTREGRPSGEAFVEMETEED 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
A+ K +E++G RY+E+F+S E+ V+ T
Sbjct: 62 LKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHT 95
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 261 VHMRGLPYRATETDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 311
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 312 VAAMSKDKANMQHRYVELFLNSTA 335
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H Y +G+PSGEAF++M++E L ++ +R + RY+EVF+ + +M+ V
Sbjct: 37 GIHFTYTREGRPSGEAFVEMETEED--LKVAVKKDRETM---GHRYVEVFKSNNVEMDWV 91
Query: 140 LNGVLP 145
+ P
Sbjct: 92 MKHTGP 97
>gi|18027358|gb|AAL55761.1|AF289577_1 unknown [Homo sapiens]
gi|119603621|gb|EAW83215.1| RNA binding motif protein 35B, isoform CRA_b [Homo sapiens]
Length = 303
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 64 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 119
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 120 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 179
Query: 171 LYP 173
LYP
Sbjct: 180 LYP 182
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 22/99 (22%)
Query: 511 IGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQH 570
+G RYIELFRST AEVQQVLN+ +G + + L +P P P
Sbjct: 2 LGKRYIELFRSTAAEVQQVLNR------------YASGPLLPT-LTAPLLPIPFPLAP-- 46
Query: 571 IITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQDSFVH 608
GT +DC+RLRGLPY A + DI F+G+ + +
Sbjct: 47 ----GTGRDCVRLRGLPYTA--TIEDILSFLGEAAADIR 79
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLPY T + ++ F E + ++ GV V G+ +GDAF+ E A
Sbjct: 53 VRLRGLPYTATIEDILSFLG---EAAADIR--PHGVHMVLNQQGRPSGDAFIQMTSAERA 107
Query: 501 DKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
A + HK+ + RY+E+ +T E+ +VL
Sbjct: 108 LAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 138
>gi|291190682|ref|NP_001167168.1| Heterogeneous nuclear ribonucleoprotein H [Salmo salar]
gi|223648432|gb|ACN10974.1| Heterogeneous nuclear ribonucleoprotein H [Salmo salar]
Length = 396
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 30/242 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGGNNNEAQAFL 433
GR +GEA V +++ +A+K+ + + RY+EV K+N D++ G N+
Sbjct: 47 GRPSGEAFVELENEDDLKIAVKKDRETMGHRYVEVFKSNNVEMDWVMKHSGPNSPETT-- 104
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
++R+RGLP+ C+ ++++ F +G E N G+ G++TG+AFV
Sbjct: 105 ---GDGLVRLRGLPFGCSKEEIVQFL-SGLEIVPN------GITLPLDFQGRSTGEAFVQ 154
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ-----QVLNKTMELPKNNSLTSSNNG 548
F ++ A+KAL KHKE IG RYIE+F+S+ AEV+ Q M+ P S G
Sbjct: 155 FASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQRKPMGMQRPGPYDRPSGGRG 214
Query: 549 LSAQQPMLSHLAQVPVPYLPQHIITSGTRKD-----------CIRLRGLPYEALCILMDI 597
+ ++ G D C+ +RGLPY A +
Sbjct: 215 YNMMGGRGGGSYDRARRGGYGGGVSDGRYGDSSSSFQSTTGHCVHMRGLPYRATETDIYN 274
Query: 598 FF 599
FF
Sbjct: 275 FF 276
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
++ G ++R+RGLP+ C+ +V FF + C + + + F +G+ +G+AFV
Sbjct: 1 MSDGEGYVVRVRGLPWSCSVDEVRRFF-----SDCKIANNGTSIHFTSTREGRPSGEAFV 55
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E++ A+ K +E++G RY+E+F+S E+ V+ +
Sbjct: 56 ELENEDDLKIAVKKDRETMGHRYVEVFKSNNVEMDWVMKHS 96
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 85/207 (41%), Gaps = 59/207 (28%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN------------ 414
G+ L L GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 136 GITLPLDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPQR 195
Query: 415 ---------------GEDFINVAGGNN----------------------NEAQAFLTRGA 437
G N+ GG + + +F +
Sbjct: 196 KPMGMQRPGPYDRPSGGRGYNMMGGRGGGSYDRARRGGYGGGVSDGRYGDSSSSFQSTTG 255
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ MRGLPY T + +FF +V G PDG+ TG+A V F
Sbjct: 256 HCV-HMRGLPYRATETDIYNFFSPLNPVRVHVEIG---------PDGRVTGEADVEFATH 305
Query: 498 EEADKALSKHKESIGIRYIELFRSTTA 524
E+A A+SK K ++ RY+ELF ++TA
Sbjct: 306 EDAVAAMSKDKANMQHRYVELFLNSTA 332
>gi|351707744|gb|EHB10663.1| G-rich sequence factor 1 [Heterocephalus glaber]
Length = 455
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 33/187 (17%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ + AL++H+ ++ +RY+EV + N ED +
Sbjct: 123 GIHFLLNRDGKRRGDALIEMESERDVQKALEKHRLYMGQRYVEVYEINNEDVDALMKSLQ 182
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE---------------------- 464
+A + G ++R+RGLPY C+ K ++DFF +
Sbjct: 183 VKASPLVNDG---VVRLRGLPYSCSEKDIVDFFAGAQQFDHIWGITSPMSSFLIVLLYLR 239
Query: 465 ---NSCNVMDGEEGVLFVKKPDGK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
N++D + FV G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F
Sbjct: 240 SVPTGLNIVD----ITFVMDYRGRRKTGEAYVQFEEPEMASQALMKHREEIGNRYIEIFP 295
Query: 521 STTAEVQ 527
S EV+
Sbjct: 296 SRRNEVR 302
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 44/166 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF+ C + + E+G+ F+ DGK GDA + E E +
Sbjct: 93 LIRAQGLPWSCTVEDVLNFFQ-----DCKIRNSEKGIHFLLNRDGKRRGDALIEMESERD 147
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ K + L N+G+
Sbjct: 148 VQKALEKHRLYMGQRYVEVYEINNEDVDALM-KSLQV-KASPLV--NDGV---------- 193
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVGQQ 603
+RLRGLPY C DI FF G Q
Sbjct: 194 ---------------------VRLRGLPYS--CSEKDIVDFFAGAQ 216
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + +G+H + N G+ G+A I+M+SE A + +H M
Sbjct: 105 VEDVLNFFQDCKIRNSEKGIHFLLNRDGKRRGDALIEMESERDVQKALE-KHRLYM---- 159
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP ++
Sbjct: 160 GQRYVEVYEINNEDVDALMKSLQVKASPLVN 190
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK--PDGKATGDAFVLFEKE 497
++ MRGLP++ A+ +I N C V + GKATG+A V F
Sbjct: 374 VVHMRGLPFQANAQDII--------NVCAFFMPLRPVRITMEYSSSGKATGEAHVHFGSH 425
Query: 498 EEADKALSKHKESIGIRYIELF 519
E+A A+ K + + RYIELF
Sbjct: 426 EDAVAAMLKDRSHVHHRYIELF 447
>gi|156550801|ref|XP_001600558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Nasonia
vitripennis]
Length = 563
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 10/171 (5%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + +S GR +GEA + +E + A KR + H+ RYIEV KA + V
Sbjct: 41 GKAGIHMTMSREGRPSGEAYIEMDSEEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVIK 100
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 101 RSCLNLENVMDDGC---VRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTDYT 150
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM 534
G++TG+A+V F ++ A++AL KHKE IG RYIE+FRS+ +EV+ + M
Sbjct: 151 GRSTGEAYVQFVNKDVAERALQKHKEKIGHRYIEIFRSSLSEVRASIGPKM 201
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ T +++ FF C++ G+ G+ +G+ +G+A++ + EE+
Sbjct: 14 VVKVRGLPWSTTVDEIMKFF-----GDCSITHGKAGIHMTMSREGRPSGEAYIEMDSEED 68
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+KA + ++ +G RYIE+F++ E++ V+ ++
Sbjct: 69 IEKACKRDRDHMGHRYIEVFKAKRGEMEWVIKRS 102
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
N GGN+N G + MRGLP+ T + + DFF + S + +
Sbjct: 279 NYRGGNDN--WNCNNGGGMHCVHMRGLPFRATEQDIADFFRPLSPIS---------IRII 327
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ G+A+G+A V F EEA KA+SK K + RYIELF
Sbjct: 328 LENGGRASGEADVEFASHEEAVKAMSKDKSHMSHRYIELF 367
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+ I++F G+ + G+HM + +G+PSGEA+I+MDSE + + +R+ +
Sbjct: 26 VDEIMKFFGDCSITHGKAGIHMTMSREGRPSGEAYIEMDSEED--IEKACKRDRDHM--- 80
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 81 GHRYIEVFKAKRGEMEWVI 99
>gi|351712921|gb|EHB15840.1| Heterogeneous nuclear ribonucleoprotein H2 [Heterocephalus glaber]
Length = 416
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTAGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG R++E+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRHVEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTAGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTAGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|60098931|emb|CAH65296.1| hypothetical protein RCJMB04_15n19 [Gallus gallus]
Length = 499
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 14/163 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA +E +ALK+ + + RY+ V K+N D++ G
Sbjct: 72 GIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVVVFKSNNVEMDWVLKHTG 131
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N+ A +R+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 132 PNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQG 179
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 180 RSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 222
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 42 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 96
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+ +F+S E+ VL T NS ++N+G
Sbjct: 97 VKLALKKDRETMGHRYVVVFKSNNVEMDWVLKHT----GPNSPDTANDGF 142
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 321 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 371
Query: 501 DKALSKHKESIGIRYIELF 519
A+SK K ++ RY+ELF
Sbjct: 372 VAAMSKDKANMQHRYVELF 390
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + RY+ VF+ + +M+ V
Sbjct: 72 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM---GHRYVVVFKSNNVEMDWV 126
Query: 140 LNGVLPPTSPAISPVG 155
L P SP + G
Sbjct: 127 LKHT-GPNSPDTANDG 141
>gi|307203918|gb|EFN82825.1| Heterogeneous nuclear ribonucleoprotein H2 [Harpegnathos saltator]
Length = 388
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + +S GR +GEA V E + A KR + H+ RYIEV KA + V
Sbjct: 25 GKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVVK 84
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 85 RSGLNLENAMDDGC---VRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTDYT 134
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
G++TG+A+V F ++ A++AL KHKE IG RYIE+FRS+ +EV+ + M
Sbjct: 135 GRSTGEAYVQFVNKDVAERALQKHKEKIGHRYIEIFRSSLSEVRASIGPKMR 186
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 40/159 (25%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
MRGLP+ T ++I FF C++ +G+ GV +G+ +G+A+V + E+ +K
Sbjct: 1 MRGLPWSTTVDEIIKFFA-----DCSISNGKNGVHMTMSREGRPSGEAYVEMDTPEDIEK 55
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQV 562
A + ++ +G RYIE+F++ E++ V+ ++ GL+ + M
Sbjct: 56 ACKRDRDHMGHRYIEVFKAKRGEMEWVVKRS--------------GLNLENAMDD----- 96
Query: 563 PVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 97 ----------------GCVRLRGLPFGCSKEEIAQFFSG 119
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ I++F + + + GVHM + +G+PSGEA+++MD+ + + +R+ +
Sbjct: 8 TTVDEIIKFFADCSISNGKNGVHMTMSREGRPSGEAYVEMDTPED--IEKACKRDRDHM- 64
Query: 120 GKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 65 --GHRYIEVFKAKRGEMEWVV 83
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP++ T + + DFF + V + + G+ +G+A V F EEA
Sbjct: 271 IHMRGLPFKATEQDIADFFRPIEPVN---------VRIILENGGRPSGEADVEFATHEEA 321
Query: 501 DKALSKHKESIGIRYIELF 519
KA+ K K + RYIELF
Sbjct: 322 VKAMCKDKSHMLHRYIELF 340
>gi|198417021|ref|XP_002122500.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H2
(hnRNP H2) (Heterogeneous nuclear ribonucleoprotein H)
(hnRNP H) (FTP-3) [Ciona intestinalis]
Length = 420
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 360 EQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI 419
E V G G+ + R +GEA V Q+ ++ I KRYIEV +++ ++
Sbjct: 29 EVVGGEAGIRRTYTDDQRPSGEAFVEVTSQKSLQTCFEKDHQLIGKRYIEVFESSVKEME 88
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
V G + E + + A V +R+RGLP++C+ ++V FF +G E N G+
Sbjct: 89 YVLGLSEEEIGS--SAQADVFVRLRGLPFQCSKEEVAQFF-SGLEIVPN------GITLP 139
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+G++TG+A+V F E A+KAL+KHKE IG RYIE+F+S+ E+ + + M+
Sbjct: 140 LDDNGRSTGEAYVEFGSPESAEKALTKHKEKIGHRYIEIFKSSKRELMESQGEYMD 195
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 40/164 (24%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R+RGLP+ T +VI F + V+ GE G+ D + +G+AFV +
Sbjct: 5 RYVVRLRGLPWAATEAEVIKFL------NVEVVGGEAGIRRTYTDDQRPSGEAFVEVTSQ 58
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
+ K + IG RYIE+F S+ E++ VL L+ G SAQ +
Sbjct: 59 KSLQTCFEKDHQLIGKRYIEVFESSVKEMEYVLG----------LSEEEIGSSAQADVF- 107
Query: 558 HLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
+RLRGLP++ + FF G
Sbjct: 108 -----------------------VRLRGLPFQCSKEEVAQFFSG 128
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 424 GNNNEAQAFLTRGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
G+ N + F A Q ++RMRGLP++C + V +FF N+
Sbjct: 299 GDENYGEEFYEEEASPSQFVVRMRGLPFKCQEQDVFNFFSPLVPVRVNIE---------Y 349
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
DG+ TG+ V F ++A A+ K+KE I RYIELF
Sbjct: 350 SDDGRVTGEGTVFFASYQDAQAAMQKNKECIQHRYIELF 388
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L L GR GEA V F E + AL +HK I RYIE+ K++ + + G
Sbjct: 135 GITLPLDDNGRSTGEAYVEFGSPESAEKALTKHKEKIGHRYIEIFKSSKRELMESQGEYM 194
Query: 427 NEAQAFLTRG 436
++ + F +RG
Sbjct: 195 DDERGFGSRG 204
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ Y +PSGEAF+++ S+ S + H + GK RYIEVF+ S ++M V
Sbjct: 36 GIRRTYTDDQRPSGEAFVEVTSQKSLQTCFEKDHQ---LIGK--RYIEVFESSVKEMEYV 90
Query: 140 L 140
L
Sbjct: 91 L 91
>gi|224084107|ref|XP_002307213.1| predicted protein [Populus trichocarpa]
gi|222856662|gb|EEE94209.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-- 427
L ++ GR GEA V F + AL+R + ++ +RY+EV + +D+ N N
Sbjct: 80 LLVNKSGRFTGEAFVVFAGPMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYE 139
Query: 428 --------------EAQAFLTRGAQV---IIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
A+ F + I++MRGLP+ ++I+FF+ ++
Sbjct: 140 GIYDNDYHGSPPPSRAKRFSDKDQMEYTEILKMRGLPFSAKKAEIIEFFK-----DFKLI 194
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
D E + +PDGKATG+A+V F EEA +A+SK K +IG RY+ELF ST E ++
Sbjct: 195 D--ERIHIACRPDGKATGEAYVEFISAEEAKRAMSKDKMTIGSRYVELFPSTQDEARRAE 252
Query: 531 NKTME 535
+++ +
Sbjct: 253 SRSRQ 257
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ +++ FF AG +++D VL V K G+ TG+AFV+F +
Sbjct: 52 VVRLRGLPFNCSDVEILKFF-AG----LDIVD----VLLVNK-SGRFTGEAFVVFAGPMQ 101
Query: 500 ADKALSKHKESIGIRYIELFR 520
+ AL + ++++G RY+E+FR
Sbjct: 102 VEFALQRDRQNMGRRYVEVFR 122
>gi|188528963|ref|NP_001120907.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Xenopus
(Silurana) tropicalis]
gi|183986477|gb|AAI66302.1| hnrnph3 protein [Xenopus (Silurana) tropicalis]
Length = 416
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
+ G+ G+ S GR +GEA + +E AL++ + ++ RYIEV K+N + V
Sbjct: 31 IEGVSGIHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVFKSNNTEMEWV 90
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
+ + + + +R+RGLP+ C+ ++++ FF +G N G+
Sbjct: 91 L---KHNSTGDVDTASDGTVRLRGLPFGCSKEEIVQFF-SGLRIVPN------GITLTVD 140
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
G++TG+AFV F +E A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 141 YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEIRS 187
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ I+R+RGLP+ CT ++V++FF + C++++G G+ F +G+ +G+AF++ + E
Sbjct: 4 EFIVRVRGLPWSCTKEEVLEFF-----SECSIIEGVSGIHFTTSKEGRPSGEAFIILDTE 58
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVL--NKTMELPKNNSLTSSNNGL 549
E+ KAL K ++ +G RYIE+F+S E++ VL N T ++ + T GL
Sbjct: 59 EDLKKALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGDVDTASDGTVRLRGL 112
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF T ++ G DG+ATG+A V F E+
Sbjct: 283 FVHMRGLPFRATESDIANFFSPLTPIRVHIDVG---------ADGRATGEADVEFATHED 333
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RYIELF ++TA
Sbjct: 334 AVAAMSKDKNNMQHRYIELFLNSTA 358
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E +LEF E + G+H + +G+PSGEAFI +D+E L L +R +
Sbjct: 19 EEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEED--LKKALEKDRKYM---G 73
Query: 123 QRYIEVFQCSGEDMNLVL 140
RYIEVF+ + +M VL
Sbjct: 74 HRYIEVFKSNNTEMEWVL 91
>gi|348534060|ref|XP_003454521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Oreochromis niloticus]
Length = 401
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
GV S GR +GEA + E AL + + ++ RYIEV K+N + V
Sbjct: 39 GVCFTYSKEGRPSGEAFIELKTAEDFKNALAKDRKYMGHRYIEVFKSNRSEMDWVL---K 95
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
A + ++R+RGLP+ C+ ++++ FF +G N G+ G++
Sbjct: 96 RSGPADYDSCSGCMLRLRGLPFGCSKEEIVQFF-SGLRIVPN------GITLPVDYQGRS 148
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSN 546
TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ E++ E+P+
Sbjct: 149 TGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEIRAYY----EVPR-------- 196
Query: 547 NGLSAQQP 554
G+ AQ+P
Sbjct: 197 RGMGAQRP 204
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT +V FF + C+++ GV F +G+ +G+AF+ + E+
Sbjct: 9 VVRIRGLPWSCTQDEVASFF-----SDCDIVGKVNGVCFTYSKEGRPSGEAFIELKTAED 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL+K ++ +G RYIE+F+S +E+ VL ++
Sbjct: 64 FKNALAKDRKYMGHRYIEVFKSNRSEMDWVLKRS 97
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + FF + N + + P+GK+TG+A V F E+
Sbjct: 295 FVHMRGLPFRATEGDIAKFF-----SPLNPLR----IHIDMAPNGKSTGEADVEFRSHED 345
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K + RYIELF ++TA
Sbjct: 346 AVAAMSKDKNHMQHRYIELFLNSTA 370
>gi|197246805|gb|AAI68807.1| hnrnph3 protein [Xenopus (Silurana) tropicalis]
Length = 413
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
+ G+ G+ S GR +GEA + +E AL++ + ++ RYIEV K+N + V
Sbjct: 31 IEGVSGIHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVFKSNNTEMEWV 90
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
+ + + + +R+RGLP+ C+ ++++ FF +G N G+
Sbjct: 91 L---KHNSTGDVDTASDGTVRLRGLPFGCSKEEIVQFF-SGLRIVPN------GITLTVD 140
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
G++TG+AFV F +E A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 141 YQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEIRS 187
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ I+R+RGLP+ CT ++V++FF + C++++G G+ F +G+ +G+AF++ + E
Sbjct: 4 EFIVRVRGLPWSCTKEEVLEFF-----SECSIIEGVSGIHFTTSKEGRPSGEAFIILDTE 58
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVL--NKTMELPKNNSLTSSNNGL 549
E+ KAL K ++ +G RYIE+F+S E++ VL N T ++ + T GL
Sbjct: 59 EDLKKALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGDVDTASDGTVRLRGL 112
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF T ++ G DG+ATG+A V F E+
Sbjct: 283 FVHMRGLPFRATESDIANFFSPLTPIRVHIDVG---------ADGRATGEADVEFATHED 333
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RYIELF ++TA
Sbjct: 334 AVAAMSKDKNNMQHRYIELFLNSTA 358
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E +LEF E + G+H + +G+PSGEAFI +D+E L L +R +
Sbjct: 19 EEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEED--LKKALEKDRKYM---G 73
Query: 123 QRYIEVFQCSGEDMNLVL 140
RYIEVF+ + +M VL
Sbjct: 74 HRYIEVFKSNNTEMEWVL 91
>gi|410912106|ref|XP_003969531.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Takifugu
rubripes]
Length = 371
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
GV S GR +GEA + E AL + + ++ RYIEV K+N + V
Sbjct: 39 GVCFTYSKEGRPSGEAFIELKTAEDFKNALAKDRKYMGHRYIEVFKSNRSEMDWVL---K 95
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
A + +R+RGLP+ C+ ++++ FF +G N G+ G++
Sbjct: 96 RSGPADYDSCSGCTLRLRGLPFGCSKEEIVQFF-SGLRIVPN------GITLPVDYQGRS 148
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSN 546
TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ E++ ELP+
Sbjct: 149 TGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEIRAYY----ELPR-------- 196
Query: 547 NGLSAQQP 554
G+ Q+P
Sbjct: 197 RGMGGQRP 204
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++V FF + C+++ GV F +G+ +G+AF+ + E+
Sbjct: 9 VVRIRGLPWSCTQEEVAGFF-----SDCDIIGKVNGVCFTYSKEGRPSGEAFIELKTAED 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL+K ++ +G RYIE+F+S +E+ VL ++
Sbjct: 64 FKNALAKDRKYMGHRYIEVFKSNRSEMDWVLKRS 97
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T V FF N V + F P+GK+TG+A V F E+
Sbjct: 264 FVHMRGLPFRATEGDVAKFFSP--LNPLRVH-----IDFA--PNGKSTGEADVEFRSHED 314
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
A A+SK K + RYIELF ++T+ L +
Sbjct: 315 AVAAMSKDKNHMQHRYIELFLNSTSSGASELGR 347
>gi|410923501|ref|XP_003975220.1| PREDICTED: G-rich sequence factor 1-like [Takifugu rubripes]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 36/229 (15%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G+ G+ L+ GR G A + D+E + AL++H+ ++ RY+EV T+++ E +
Sbjct: 117 GVKGIHFTLNKMGRPTGIAFIEMEDEEDVNKALEKHRQYLGPRYVEVYEVTESDAEAIME 176
Query: 421 VAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
A G ++ ++R+RGLP+ T + FF + +++ E G+ +
Sbjct: 177 KATG---------SQADDGVVRLRGLPFSSTKADIAQFF-----SDLDIV--ENGITIIT 220
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNN 540
G+ +G+AFV F +EEA+KAL + + +G RYIE+F S + EV +K M +N+
Sbjct: 221 DHAGRNSGEAFVQFFSKEEAEKALLRDRAVMGTRYIEVFPSRSEEVYS--SKRM---RNS 275
Query: 541 SLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
++ + + + ++ L Q LP H I +RGLP++
Sbjct: 276 GVSDTGHSVRNRRTTSQSLVQNS---LPLHY---------IHMRGLPFQ 312
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA---- 422
G+ + GR +GEA V+F +E + AL R + + RYIEV + E+ +
Sbjct: 215 GITIITDHAGRNSGEAFVQFFSKEEAEKALLRDRAVMGTRYIEVFPSRSEEVYSSKRMRN 274
Query: 423 GGNNNEAQAFLTRGAQV-----------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
G ++ + R I MRGLP++ + + V++FF +
Sbjct: 275 SGVSDTGHSVRNRRTTSQSLVQNSLPLHYIHMRGLPFQVSGEDVVNFFRPLVVSK----- 329
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+L PDG+ +G+A V F + E+A A+S+ +E IG RYIELF
Sbjct: 330 ----MLMEFGPDGRPSGEADVYFGRHEDAVAAMSRDREHIGGRYIELF 373
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
R I++++GL + CT + ++ FF + C + DG +G+ F G+ TG AF+
Sbjct: 85 RKEVFIVQVKGLLWSCTPQDLLKFF-----SDCRIRDGVKGIHFTLNKMGRPTGIAFIEM 139
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E EE+ +KAL KH++ +G RY+E++ T ++ + ++ K
Sbjct: 140 EDEEDVNKALEKHRQYLGPRYVEVYEVTESDAEAIMEK 177
>gi|355694919|gb|AER99830.1| heteroproteinous nuclear ribonucleoprotein F [Mustela putorius
furo]
Length = 342
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 85/147 (57%), Gaps = 17/147 (11%)
Query: 386 FIDQEHRD---MALKRHKHHIDKRYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVI 440
F++ E D MALK+ + + RYIEV K++ D++ G N+ A
Sbjct: 2 FVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGPNSADTA-----NDGF 56
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ CT ++++ FF +G E N G+ P+GK TG+AFV F +E A
Sbjct: 57 VRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVDPEGKITGEAFVQFASQELA 109
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 110 EKALGKHKERIGHRYIEVFKSSQEEVR 136
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 235 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 285
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 286 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSAQSTYSGLDSQ 338
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 39/114 (34%)
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AFV E E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 1 AFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 56
Query: 550 SAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 57 -------------------------------VRLRGLPFG--CTKEEIVQFFSG 77
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 84 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 134
>gi|395736587|ref|XP_003780726.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H [Pongo abelii]
Length = 430
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+E K+N D++
Sbjct: 40 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEGFKSNNVEMDWVLK 99
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 100 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 147
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 148 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 193
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 9 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 63
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E F+S E+ VL T NS ++N+G
Sbjct: 64 SEDEVKLALKKDRETMGHRYVEGFKSNNVEMDWVLKHT----GPNSPDTANDGF 113
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 292 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 342
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 343 VAAMSKDKANMQHRYVELFLNSTA 366
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+E F+ + +M+
Sbjct: 42 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEGFKSNNVEMDW 96
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 97 VLKHT-GPNSPDTANDG 112
>gi|47086853|ref|NP_997754.1| heterogeneous nuclear ribonucleoprotein H1, like [Danio rerio]
gi|28278402|gb|AAH44161.1| Zgc:85960 [Danio rerio]
gi|182891430|gb|AAI64507.1| Zgc:85960 protein [Danio rerio]
Length = 407
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 30/232 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV---AGGNNNEAQAF 432
GR +GEA V ++ +A+K+ + + RY+EV K+N + V G N E +
Sbjct: 47 GRPSGEAFVELESEDDLKIAVKKDRESMGHRYVEVFKSNNVEMDWVLKHTGPNCPETEG- 105
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
++R+RGLP+ C+ ++++ FF +G E N G+ G++TG+AFV
Sbjct: 106 -----DGLVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQGRSTGEAFV 153
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL-----NKTMELPKNNSLTSSN- 546
F ++ A+KAL KHKE IG RYIE+F+S+ AEV+ M+ P S
Sbjct: 154 QFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPPRKGMGMQRPGPYDRPSGGG 213
Query: 547 ---NGLSAQQPMLSHLAQVPVPYLPQHIITSG-----TRKDCIRLRGLPYEA 590
NG+S + G T C+ +RGLPY A
Sbjct: 214 RGYNGMSRGGSFDRMRRGGYGGGVSDGRYGDGGNFQSTTGHCVHMRGLPYRA 265
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+A++V FF + C + + F +G+ +G+AFV E E++
Sbjct: 8 VVRVRGLPWSCSAEEVSRFF-----SGCKISSNGSAIHFTYTREGRPSGEAFVELESEDD 62
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
A+ K +ES+G RY+E+F+S E+ VL T
Sbjct: 63 LKIAVKKDRESMGHRYVEVFKSNNVEMDWVLKHT 96
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 81/205 (39%), Gaps = 57/205 (27%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTK-------------- 412
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K
Sbjct: 136 GITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPPR 195
Query: 413 ------------------------ANGEDF---------INVAGGNNNEAQAFLTRGAQV 439
+ G F V+ G + F +
Sbjct: 196 KGMGMQRPGPYDRPSGGGRGYNGMSRGGSFDRMRRGGYGGGVSDGRYGDGGNFQSTTGHC 255
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+
Sbjct: 256 V-HMRGLPYRATEPDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHED 305
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+S K ++ RY+ELF ++TA
Sbjct: 306 AVAAMSNDKANMQHRYVELFLNSTA 330
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 81 VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL 140
+H Y +G+PSGEAF++++SE +A ++ +R + RY+EVF+ + +M+ VL
Sbjct: 39 IHFTYTREGRPSGEAFVELESEDDLKIA--VKKDRESM---GHRYVEVFKSNNVEMDWVL 93
Query: 141 NGVLP 145
P
Sbjct: 94 KHTGP 98
>gi|294461682|gb|ADE76400.1| unknown [Picea sitchensis]
Length = 265
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 369 ALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNE 428
AL + GR +GE V F D AL+R + ++ +RYIEV + +D+ N NE
Sbjct: 90 ALLVHKQGRFSGEGFVLFRSPMQVDFALQRDRQNMGRRYIEVFRCKKQDYYNAVAAEVNE 149
Query: 429 AQAF--------LTRGAQV--------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
+A ++G+ +++RGLP+ + + +++FF+ +
Sbjct: 150 PKAGDDAAPPSGYSKGSSEKDHMEHTGFLKLRGLPFSVSRRDIVEFFK-------DYQLK 202
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ V V DG+ATG+AFV F ++ A+SK K +IG RY+ELF ST E + ++
Sbjct: 203 EKNVHIVTHSDGRATGEAFVEFSSAADSKDAMSKDKMTIGTRYVELFPSTQEEASRAASR 262
Query: 533 T 533
+
Sbjct: 263 S 263
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ + +FF +V+D L V K G+ +G+ FVLF +
Sbjct: 63 VVRLRGLPFNCSESDICEFFAG-----LDVVD----ALLVHK-QGRFSGEGFVLFRSPMQ 112
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL + ++++G RYIE+FR + + + PK + +G S H+
Sbjct: 113 VDFALQRDRQNMGRRYIEVFRCKKQDYYNAVAAEVNEPKAGDDAAPPSGYSKGSSEKDHM 172
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
++LRGLP+
Sbjct: 173 EHTGF----------------LKLRGLPF 185
>gi|395521342|ref|XP_003764777.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Sarcophilus harrisii]
Length = 465
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ G+ + GR +GEA V +E ++ALK+HK + RY+EV ++NG + +
Sbjct: 38 GVAGIHFMYTREGRPSGEAFVELESEEEIELALKKHKETMAHRYVEVFRSNG---VEMDW 94
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
A + +R+RGLP+ C + +++FF +G E N G++
Sbjct: 95 TLKRTAPSSPDPAGDGYVRLRGLPFNCNKEDIVEFF-SGLEIMPN------GIMLQVDFR 147
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
GK +G+AFV F +E A+KAL KHKE +G RYIE+F+S+ AEV
Sbjct: 148 GKNSGEAFVQFASQEIAEKALKKHKEKMGHRYIEIFKSSQAEVH 191
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ ++++RGLP+ C+A V +FF + C + +G G+ F+ +G+ +G+AFV E
Sbjct: 8 GRFVVKVRGLPWSCSASDVQNFF-----SGCRIRNGVAGIHFMYTREGRPSGEAFVELES 62
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
EEE + AL KHKE++ RY+E+FRS E+ L +T
Sbjct: 63 EEEIELALKKHKETMAHRYVEVFRSNGVEMDWTLKRT 99
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 418 FINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
F+ V+G + + A + MRGLPY+ T K + DFF + G
Sbjct: 261 FLAVSGDSYGSGWSTFQSPAGHFVHMRGLPYKATEKDIYDFFSPLKPVGAYIEVG----- 315
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
DG+ TG+A V F E+A A+SK K ++ RYIELF ++ A
Sbjct: 316 ----ADGRVTGEADVEFATHEDAVAAMSKDKANMQHRYIELFLNSVA 358
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H +Y +G+PSGEAF++++SE LA + +H M RY+EVF+ +G +M+
Sbjct: 41 GIHFMYTREGRPSGEAFVELESEEEIELALK-KHKETMA----HRYVEVFRSNGVEMDWT 95
Query: 140 LNGVLPPTSPAISPVGKTLLSPGMLP 165
L P+SP P G + LP
Sbjct: 96 LK-RTAPSSP--DPAGDGYVRLRGLP 118
>gi|321466664|gb|EFX77658.1| hypothetical protein DAPPUDRAFT_198258 [Daphnia pulex]
Length = 397
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 362 VLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
V G G+ + + GR GE + +E + AL +H H+ RYIEV ++ + +
Sbjct: 33 VGGAAGIHMTYTREGRPTGEGYLELSSEEDVERALTKHNEHLGPRYIEVFRSKRSEMEWM 92
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
+ A + +R+RGLP+ C+ +++ FF G E N G+
Sbjct: 93 VKRSGPPNAAAPSSDDDCFVRLRGLPFGCSKEEIAQFF-TGLEIVPN------GITLPTD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G++TG+A++ F A++AL KHKE IG RYIE+FRS+ +E + L
Sbjct: 146 YSGRSTGEAYIQFATSALAERALEKHKEKIGHRYIEIFRSSLSEARAAL 194
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 39/163 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T ++ FFE N++ G G+ +G+ TG+ ++ EE+
Sbjct: 8 VVRLRGLPWAVTDDDILKFFE-----DSNIVGGAAGIHMTYTREGRPTGEGYLELSSEED 62
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
++AL+KH E +G RYIE+FRS +E++ ++ ++ P N + SS++
Sbjct: 63 VERALTKHNEHLGPRYIEVFRSKRSEMEWMVKRSG--PPNAAAPSSDD------------ 108
Query: 560 AQVPVPYLPQHIITSGTRKDC-IRLRGLPYEALCILMDIFFVG 601
DC +RLRGLP+ + FF G
Sbjct: 109 -------------------DCFVRLRGLPFGCSKEEIAQFFTG 132
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 60 VLVEHILEFLGEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNM 117
V + IL+F + SNIV G+HM Y +G+P+GE ++++ SE A +HN ++
Sbjct: 18 VTDDDILKFFED--SNIVGGAAGIHMTYTREGRPTGEGYLELSSEEDVERAL-TKHNEHL 74
Query: 118 IFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
RYIEVF+ +M ++ PP + A S
Sbjct: 75 ----GPRYIEVFRSKRSEMEWMVKRSGPPNAAAPS 105
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G+ I MRGLP+ + + +FF + + + + + G+A+G+A V F
Sbjct: 304 GSGHRIHMRGLPFRASEDDIAEFF-----HPLHPV-----AIHIGYEQGRASGEADVEFA 353
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTT 523
E+A +A+S+ K ++ RYIELF ++T
Sbjct: 354 THEDAVRAMSRDKCNMQHRYIELFLNST 381
>gi|299472433|emb|CBN77621.1| heterogeneous nuclear ribonucleoprotein, putative [Ectocarpus
siliculosus]
Length = 305
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 36/195 (18%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
V + A GR GEAIV + MAL R K H+ +RYIE+ ++ D+ + G
Sbjct: 118 VVMVTRADGRGAGEAIVVLPNLMEMQMALSRDKQHMGRRYIEIFQSKRMDYYSAVVGQLQ 177
Query: 428 EAQAFLTRGAQV-----------------------------IIRMRGLPYECTAKQVIDF 458
+ +IRMRGLP+ T + V++F
Sbjct: 178 SQNMGGMQRQGGGGMGHGSMGGGGAGGLGPDGMAMPVVHTGVIRMRGLPFSATKQDVLNF 237
Query: 459 FEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
F+ E+ + FV + DG+ TG+AFV F E++ A+S++ +G RY+EL
Sbjct: 238 FQGMPVT-------EDTIQFVVRGDGRVTGEAFVSFSSPAESEAAMSRNGNHMGTRYVEL 290
Query: 519 FRSTTAEVQQVLNKT 533
F ST E+ + +N+T
Sbjct: 291 FASTPEEIVRHMNRT 305
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+E T V+ FF+ +D V+ V + DG+ G+A V+ E
Sbjct: 92 VRLRGLPFEATIDDVLRFFQG-----LVPLD----VVMVTRADGRGAGEAIVVLPNLMEM 142
Query: 501 DKALSKHKESIGIRYIELFRS 521
ALS+ K+ +G RYIE+F+S
Sbjct: 143 QMALSRDKQHMGRRYIEIFQS 163
>gi|395521348|ref|XP_003764780.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Sarcophilus harrisii]
Length = 304
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G+ G+ + GR +GEA V +E ++ALK+H+ + RY+EV ++N D+
Sbjct: 38 GVAGIHFIYTREGRPSGEAFVELESEEEVELALKKHRETMAHRYVEVFRSNAVEMDWTLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
N+ A +R+RGLP+ C + ++ FF +G E N G++
Sbjct: 98 RTAPNSPDPA-----GDGYVRLRGLPFNCNKEDIVQFF-SGLEIMPN------GIMLQVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ +G+AFV F +E A+KAL KHKE +G RYIE+F+S+ AEV
Sbjct: 146 FRGRNSGEAFVQFASQEIAEKALKKHKERMGHRYIEIFKSSQAEVH 191
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++++RGLP+ C+A V FF + C + +G G+ F+ +G+ +G+AFV E
Sbjct: 8 GSFVVKVRGLPWSCSASDVQHFF-----SGCRIRNGVAGIHFIYTREGRPSGEAFVELES 62
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
EEE + AL KH+E++ RY+E+FRS E+ L +T
Sbjct: 63 EEEVELALKKHRETMAHRYVEVFRSNAVEMDWTLKRT 99
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H +Y +G+PSGEAF++++SE LA + +H M RY+EVF+ + +M+
Sbjct: 41 GIHFIYTREGRPSGEAFVELESEEEVELALK-KHRETM----AHRYVEVFRSNAVEMDWT 95
Query: 140 LNGVLP 145
L P
Sbjct: 96 LKRTAP 101
>gi|403281341|ref|XP_003945266.1| PREDICTED: LOW QUALITY PROTEIN: G-rich sequence factor 1 [Saimiri
boliviensis boliviensis]
Length = 439
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 13/155 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 179 GQNGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRLYMGQRYVEVYEINNEDVDALMK 238
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K +IDFF AG N++D + FV
Sbjct: 239 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIIDFF-AGL----NIVD----ITFVMDYR 286
Query: 484 G-KATGDAFVLFEKEEEADKALSKHKESIGIRYIE 517
G + TG+A+V FE+ E A++AL KH+E IG R ++
Sbjct: 287 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRXVK 321
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +G+ G+ F+ DGK GDA + E E++
Sbjct: 152 LIRAQGLPWSCTIEDVLNFF-----SDCRIRNGQNGIHFLLNRDGKRRGDALIEMESEQD 206
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 207 VQKALEKHRLYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 252
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 253 ---------------------VRLRGLPYS--CNEKDIIDFFAG 273
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 363 LGLGGVALCLSAFGRRN-GEAIVRFIDQEHRDMALKRHKHHIDKRYIE---------VTK 412
L + + + GRR GEA V+F + E + AL +H+ I R ++
Sbjct: 274 LNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRXVKQILMMRKCHYDL 333
Query: 413 ANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
+GE EA F T + MRGLP++ A+ +I+FF
Sbjct: 334 KSGEKLPKEVPEKLPEAADFGTTPCLHFVHMRGLPFQANAQDIINFFAPLKPVR------ 387
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ GKATG+A V FE E+A A+ K + + RYIELF
Sbjct: 388 ---ITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELF 431
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 34 YVIIDSYVNKVLITSQYKEPIQGF-KKVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPS 92
Y + S + + ++ Y QG +E +L F + G+H + N G+
Sbjct: 135 YELAPSKLGEEVVDDVYLIRAQGLPWSCTIEDVLNFFSDCRIRNGQNGIHFLLNRDGKRR 194
Query: 93 GEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
G+A I+M+SE A + +H M QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 195 GDALIEMESEQDVQKALE-KHRLYM----GQRYVEVYEINNEDVDALMKSLQVKSSPVVN 249
>gi|339253436|ref|XP_003371941.1| RNA-binding protein 35B [Trichinella spiralis]
gi|316967724|gb|EFV52114.1| RNA-binding protein 35B [Trichinella spiralis]
Length = 564
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
+ GGVALCLS GRRNGEA+VRF + EHR++ALKRH+H + RYIEV ++ GEDF+N+A
Sbjct: 417 IARGGVALCLSPQGRRNGEALVRFENAEHRELALKRHRHFMGSRYIEVYRSTGEDFLNIA 476
Query: 423 G 423
Sbjct: 477 A 477
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ +IR RGLP++ + + V FF N+ G GV P G+ G+A V FE
Sbjct: 390 SSTVIRARGLPWQSSDQDVARFFVG-----LNIARG--GVALCLSPQGRRNGEALVRFEN 442
Query: 497 EEEADKALSKHKESIGIRYIELFRST 522
E + AL +H+ +G RYIE++RST
Sbjct: 443 AEHRELALKRHRHFMGSRYIEVYRST 468
>gi|294460097|gb|ADE75631.1| unknown [Picea sitchensis]
Length = 256
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV--------AGGNNN 427
GR +GE V F D AL+R + ++ +RYIEV + +D+ N GG++
Sbjct: 88 GRFSGEGFVVFGAPMQVDFALQRDRQNMGRRYIEVFRCKKQDYYNAIAAEVNEPKGGDDA 147
Query: 428 EAQAFLTRGAQV--------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
+ ++G+ I+++RGLP+ + + +I+FF + NV V
Sbjct: 148 APPSGYSKGSSDKDHMEHTGILKLRGLPFSVSKRDIIEFFTDYDLSETNVH-------IV 200
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
DG+ATG+AFV F + ++ A+SK K IG RY+ELF ST E + +++
Sbjct: 201 SHSDGRATGEAFVEFSNDTDSKAAMSKDKMMIGTRYVELFPSTREEASRAASRS 254
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ V +FF +V+D VL V K G+ +G+ FV+F +
Sbjct: 54 VVRLRGLPFNCSDNDVCEFFAG-----LDVVD----VLLVHK-QGRFSGEGFVVFGAPMQ 103
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL + ++++G RYIE+FR + + + PK + +G S H+
Sbjct: 104 VDFALQRDRQNMGRRYIEVFRCKKQDYYNAIAAEVNEPKGGDDAAPPSGYSKGSSDKDHM 163
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
+ ++LRGLP+
Sbjct: 164 EHTGI----------------LKLRGLPF 176
>gi|294461466|gb|ADE76294.1| unknown [Picea sitchensis]
Length = 262
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV--------AGGNNN 427
GR +GE V F D AL+R + ++ +RYIEV + +D+ N GG++
Sbjct: 94 GRFSGEGFVVFGAPMQVDFALQRDRQNMGRRYIEVFRCKKQDYYNAIAAEVNEPKGGDDA 153
Query: 428 EAQAFLTRGAQV--------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
+ ++G+ I+++RGLP+ + + +I+FF + NV V
Sbjct: 154 APPSGYSKGSSDKDHMEHTGILKLRGLPFSVSKRDIIEFFTDYDLSETNVH-------IV 206
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
DG+ATG+AFV F + ++ A+SK K IG RY+ELF ST E + +++
Sbjct: 207 SHSDGRATGEAFVEFSNDTDSKAAMSKDKMMIGTRYVELFPSTREEASRAASRS 260
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ V +FF +V+D VL V K G+ +G+ FV+F +
Sbjct: 60 VVRLRGLPFNCSDNDVCEFFAG-----LDVVD----VLLVHK-QGRFSGEGFVVFGAPMQ 109
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL + ++++G RYIE+FR + + + PK + +G S H+
Sbjct: 110 VDFALQRDRQNMGRRYIEVFRCKKQDYYNAIAAEVNEPKGGDDAAPPSGYSKGSSDKDHM 169
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
+ ++LRGLP+
Sbjct: 170 EHTGI----------------LKLRGLPF 182
>gi|351714741|gb|EHB17660.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 396
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V +E ALK+ + + RYIEV K++ D++
Sbjct: 38 GVAGVHFIYTREGRQSGEAFVELESEEDVKTALKKDRESMGHRYIEVFKSHKTEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
N+ A +R+ GL + CT +++ FF +G E N G+
Sbjct: 98 HSSPNSTDTA-----NDSFVRLWGLSFGCTKGEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG AF+ F +E A+KAL KHKE IG RYIE+F+S+ V+
Sbjct: 146 PEGKFTGKAFLQFASQELAEKALRKHKEKIGHRYIEVFKSSQEVVR 191
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 7 GEGYVVKLRGLPWSCSTEDVQNFL-----SDCTIRDGVAGVHFIYTREGRQSGEAFVELE 61
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
EE+ AL K +ES+G RYIE+F+S E+ VL +
Sbjct: 62 SEEDVKTALKKDRESMGHRYIEVFKSHKTEMDWVLKHS 99
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF + N + V +P+G+ TG+A V F EEA
Sbjct: 290 VHMRGLPYKATENDIYNFF-----SPLNAVR----VHIEIRPNGRVTGEADVEFATNEEA 340
Query: 501 DKALSKHKESIGI--RYIELFRSTT 523
A+SK K+ I RYIELF ++T
Sbjct: 341 MAAMSKDKDRTNIQHRYIELFLNST 365
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E + FL + GVH +Y +G+ SGEAF++++SE A L+ +R +
Sbjct: 23 TEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEEDVKTA--LKKDRESM--- 77
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 78 GHRYIEVFKSHKTEMDWVLKHSSPNST 104
>gi|334188661|ref|NP_001190629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332010758|gb|AED98141.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 158
Score = 89.0 bits (219), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 26/149 (17%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN----------------NEAQAFLTRG 436
++AL+R +H++ +RY+EV + + +D+ N + A+ F +
Sbjct: 4 EIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAYEYEVRASPPPTGPSRAKRFSEKE 63
Query: 437 A---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
+++MRGLPY Q+I+FF + V+ G V V +PDGKATG+AFV
Sbjct: 64 KLEYTEVLKMRGLPYSVNKPQIIEFF-----SGYKVIQGR--VQVVCRPDGKATGEAFVE 116
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRST 522
FE EEA +A++K K SIG RY+ELF +T
Sbjct: 117 FETGEEARRAMAKDKMSIGSRYVELFPTT 145
>gi|432852531|ref|XP_004067294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 398
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 22/190 (11%)
Query: 365 LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
+ GV S GR +GEA + E AL + + ++ RYIEV K+N + V
Sbjct: 37 INGVCFTYSKEGRPSGEAFLELKTAEDFKNALAKDRKYMGHRYIEVFKSNRSEMDWVLKR 96
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N A + ++R+RGLP+ C+ ++++ FF +G N G+ G
Sbjct: 97 N---GPADYDSCSGCMLRLRGLPFGCSKEEIVQFF-SGLRIVPN------GITLPVDYQG 146
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTS 544
++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ E++ ++P+
Sbjct: 147 RSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEIRAYY----DVPR------ 196
Query: 545 SNNGLSAQQP 554
GL Q+P
Sbjct: 197 --RGLGGQRP 204
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++V FF + C++M GV F +G+ +G+AF+ + E+
Sbjct: 9 VVRIRGLPWSCTQEEVASFF-----SDCDIMGKINGVCFTYSKEGRPSGEAFLELKTAED 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
AL+K ++ +G RYIE+F+S +E+ VL +
Sbjct: 64 FKNALAKDRKYMGHRYIEVFKSNRSEMDWVLKR 96
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ + V FF ++ P+GK+TG+A V F E+
Sbjct: 296 FVHMRGLPFRASEGDVAKFFSPLIPLRVHI---------DVAPNGKSTGEADVEFRSHED 346
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
A A+SK K + RYIELF ++TA Q
Sbjct: 347 AVAAMSKDKNHMQHRYIELFLNSTASGAQT 376
>gi|384253335|gb|EIE26810.1| hypothetical protein COCSUDRAFT_46239 [Coccomyxa subellipsoidea
C-169]
Length = 877
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRGLPY TA+ V+ FFE + G G+ F PDG+ G+A+V F E+
Sbjct: 323 VLRMRGLPYGATAEDVVHFFEG-----IEIERGSAGIAFTCTPDGRPKGEAYVEFPSEDA 377
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL--------SA 551
+AL +HK IG RYIELF S+ A + Q + ++ N L S + +
Sbjct: 378 QKEALKRHKNEIGDRYIELFVSSKANMIQAVQQS-----NYYLGQSQHAMGPSLLPHPLP 432
Query: 552 QQPMLSHLAQVPVPY--------LPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P+ LA PY P + S +RLRGLPY A + FF G
Sbjct: 433 PLPLHGPLASFGAPYGHAPYGQGAPMQSVVSAD-GSTLRLRGLPYSAGIDEITSFFAG 489
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 85/208 (40%), Gaps = 56/208 (26%)
Query: 358 GYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKAN 414
G E G G+A + GR GEA V F ++ + ALKRHK+ I RYIE+ +KAN
Sbjct: 344 GIEIERGSAGIAFTCTPDGRPKGEAYVEFPSEDAQKEALKRHKNEIGDRYIELFVSSKAN 403
Query: 415 ----------------------------------------GEDFINVAGGNNNEAQAFLT 434
G + + G Q+ ++
Sbjct: 404 MIQAVQQSNYYLGQSQHAMGPSLLPHPLPPLPLHGPLASFGAPYGHAPYGQGAPMQSVVS 463
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK----ATGDA 490
+R+RGLPY ++ FF + S +G+ V KPD + TG A
Sbjct: 464 ADGST-LRLRGLPYSAGIDEITSFFAGFSLAS-------DGIQVVTKPDKEGNQLGTGVA 515
Query: 491 FVLFEKEEEADKAL-SKHKESIGIRYIE 517
+V F EEA++A +H+ +G RYIE
Sbjct: 516 YVRFGNPEEAERARKERHRAQMGARYIE 543
>gi|402587720|gb|EJW81655.1| hypothetical protein WUBG_07436, partial [Wuchereria bancrofti]
Length = 59
Score = 89.0 bits (219), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 46/59 (77%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
GGVALCLS GRRNGEA+VRF D E R++ALKRH+H + RYIEV +A G DF+ VA G
Sbjct: 1 GGVALCLSPEGRRNGEALVRFEDSEQRELALKRHRHFLHNRYIEVYRATGSDFLQVAAG 59
Score = 48.1 bits (113), Expect = 0.013, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
GV P+G+ G+A V FE E+ + AL +H+ + RYIE++R+T ++ QV
Sbjct: 2 GVALCLSPEGRRNGEALVRFEDSEQRELALKRHRHFLHNRYIEVYRATGSDFLQV 56
>gi|255561415|ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
gi|223539109|gb|EEF40705.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
Length = 264
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 26/179 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR GEA V F + AL+R + ++ +RY+EV + +D+ N N
Sbjct: 93 GRFTGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDTD 152
Query: 428 --------EAQAFLTRGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
+A+ F + I++MRGLP+ ++I+FF+ ++ E+ +
Sbjct: 153 YHGSPPPSKAKRFSDKDQLEYTEILKMRGLPFSAKKPEIIEFFK-----EFELV--EDRI 205
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+PDGKATG+A+V F +EA +A+SK K +IG RY+ELF ST E ++ +++ +
Sbjct: 206 HIACRPDGKATGEAYVEFASADEAKRAMSKDKMTIGSRYVELFPSTPDEARRAESRSRQ 264
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT + FF +++D VL V K +G+ TG+AFV+F +
Sbjct: 59 VVRLRGLPFNCTDIDIFKFFAG-----LDIVD----VLLVNK-NGRFTGEAFVVFAGAMQ 108
Query: 500 ADKALSKHKESIGIRYIELFR 520
+ AL + ++++G RY+E+FR
Sbjct: 109 VEFALQRDRQNMGRRYVEVFR 129
>gi|194389792|dbj|BAG60412.1| unnamed protein product [Homo sapiens]
Length = 355
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 A----DKALSKHKESIGIRYIELFRSTTAEVQ 527
+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 67 VKLALEKALKKHKERIGHRYIEIFKSSRAEVR 98
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 197 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 247
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 248 VAAMAKDKANMQHRYVELFLNSTA 271
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQ--LRHNRNMIF 119
+ ++ F + G+ +Y +G+PSGEAF++++SE LA + L+ ++ I
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLALEKALKKHKERI- 82
Query: 120 GKKQRYIEVFQCS 132
RYIE+F+ S
Sbjct: 83 --GHRYIEIFKSS 93
>gi|242007190|ref|XP_002424425.1| Heterogeneous nuclear ribonucleoprotein F, putative [Pediculus
humanus corporis]
gi|212507825|gb|EEB11687.1| Heterogeneous nuclear ribonucleoprotein F, putative [Pediculus
humanus corporis]
Length = 412
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + ++ GR +GEA V + + ALK+ + ++ RY+EV K+ + V
Sbjct: 37 GKEGVHIIMTREGRPSGEAYVEMETDQDIEEALKKDRDYMGTRYMEVFKSKRSEMDWVIK 96
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + L G +R+RGLP+ C+ +++ FF G E N G+
Sbjct: 97 RSGSNLETALDDGC---VRLRGLPFGCSKEEIAQFF-TGLEIVPN------GITLPMDSR 146
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
G++TG+A+V F+ ++ A+KAL KHKE I RYIE+FRS+ E+ Q +
Sbjct: 147 GRSTGEAYVQFKNKDIAEKALLKHKEKIAHRYIEIFRSSLGEICQEI 193
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 40/166 (24%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G +I+MRGLP+ T ++++ FF N+C V +G+EGV + +G+ +G+A+V E
Sbjct: 6 GDSYVIKMRGLPWSTTDEEILKFF-----NNCKVKNGKEGVHIIMTREGRPSGEAYVEME 60
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPM 555
+++ ++AL K ++ +G RY+E+F+S +E+ V+ ++ +N T+ ++G
Sbjct: 61 TDQDIEEALKKDRDYMGTRYMEVFKSKRSEMDWVIKRS----GSNLETALDDG------- 109
Query: 556 LSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 110 ------------------------CVRLRGLPFGCSKEEIAQFFTG 131
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP+ T + V DFF S +++ + DG+ +G+A V F ++A
Sbjct: 304 IHMRGLPFRATKQDVADFFRPVIPLSIDLL---------TEDDGRPSGEADVEFRTHDDA 354
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK+K + RYIELF ++T
Sbjct: 355 VLAMSKNKNHMQHRYIELFLNST 377
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E IL+F +GVH++ +G+PSGEA+++M+++ + L+ +R+ +
Sbjct: 23 EEILKFFNNCKVKNGKEGVHIIMTREGRPSGEAYVEMETDQD--IEEALKKDRDYM---G 77
Query: 123 QRYIEVFQCSGEDMNLVL 140
RY+EVF+ +M+ V+
Sbjct: 78 TRYMEVFKSKRSEMDWVI 95
>gi|358341226|dbj|GAA32134.2| heterogeneous nuclear ribonucleoprotein F/H [Clonorchis sinensis]
Length = 404
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR NGEA + ++ + A H H+ +RYIEV + ++ N G
Sbjct: 30 GKRGIFFPQGPNGRSNGEAFIELESKQEIEKATAHHNEHMGRRYIEVFPSTEQEMNNAMG 89
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + + ++R+RGLPY+ K++ FF G E + N G+ +
Sbjct: 90 KHDQ----YTRDRKEYVVRLRGLPYDTEKKEIYAFFN-GLEIAPN------GIGLLVDHM 138
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
G+ TG+A+V F E +A KH E IG RYIE+F S+ E + + ME + S
Sbjct: 139 GRCTGEAYVQFTSAEMLARAKEKHMEKIGHRYIEIFESSMLEANSTIQRQMEANQERS 196
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 43/164 (26%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLPY A +IDFF+ + +G+ G+ F + P+G++ G+AF+ E ++
Sbjct: 2 AVVRIRGLPYSARADDIIDFFK-----DVKIKNGKRGIFFPQGPNGRSNGEAFIELESKQ 56
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
E +KA + H E +G RYIE+F ST E+ + K
Sbjct: 57 EIEKATAHHNEHMGRRYIEVFPSTEQEMNNAMGK-------------------------- 90
Query: 559 LAQVPVPYLPQHIITSGTRKD-CIRLRGLPYEALCILMDIFFVG 601
H + RK+ +RLRGLPY+ + FF G
Sbjct: 91 -----------HDQYTRDRKEYVVRLRGLPYDTEKKEIYAFFNG 123
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ TA ID F A + NV G+ TG+A V F +EA
Sbjct: 305 VRLRGLPFSATADD-IDRFLAPLQ-PVNVR-------IRMNSSGRPTGEAVVDFASHDEA 355
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
+A+ K +E IG RYIELF ++T
Sbjct: 356 KEAMKKDREKIGSRYIELFLAST 378
>gi|395857260|ref|XP_003801023.1| PREDICTED: G-rich sequence factor 1 [Otolemur garnettii]
Length = 528
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ + H+ ++ ++Y+EV + N ED +
Sbjct: 226 GENGIHFLLNRDGKRRGDALIEMESEXPAVRGRFVHRMYMGQQYVEVYEINNEDVDALMK 285
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 286 SLQVKSPPAVNDG---VVRLRGLPYSCDEKDIVDFF-AG----LNIVD----ITFVMDYR 333
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 334 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 378
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E
Sbjct: 199 LIRAQGLPWSCTVEDVLAFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEXP 253
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
A + H+ +G +Y+E++ +V ++ K++++ S + N+G+
Sbjct: 254 AVRGRFVHRMYMGQQYVEVYEINNEDVDALM-KSLQV---KSPPAVNDGV---------- 299
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 300 ---------------------VRLRGLPYS--CDEKDIVDFFAG 320
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A R M G
Sbjct: 211 VEDVLAFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEXPAVRG---RFVHRMYMG- 266
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
Q+Y+EV++ + ED++ ++ + + PA++
Sbjct: 267 -QQYVEVYEINNEDVDALMKSLQVKSPPAVN 296
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP++ A+ +I+FF + GKATG+A V F+ E+
Sbjct: 450 FVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFDTHED 500
Query: 500 ADKALSKHKESIGIRYIELF 519
A A+ K + + RYIELF
Sbjct: 501 AVAAMLKDRSHVHHRYIELF 520
>gi|218185179|gb|EEC67606.1| hypothetical protein OsI_34981 [Oryza sativa Indica Group]
Length = 270
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-VAGGNNNEAQAFLT 434
GR GEA V F + AL R++ ++ +RY+E + +++ + +A E ++ +
Sbjct: 119 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEGCRCKKQEYYSAIAAEKPAEDKSSME 178
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
++++RGLPY T + +I FF E EE V +PDGKATG+AFV F
Sbjct: 179 Y--TEVLKLRGLPYSATTEDIIKFF---VEYELT----EENVHIAYRPDGKATGEAFVEF 229
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
E A A+ K K +IG RY+ELF ST E + ++ +
Sbjct: 230 PTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRARQ 270
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 43/160 (26%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 86 VRLRGLPFDCDDLDIFKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 135
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E R E + ++A++P
Sbjct: 136 EFALHRNRQNMGRRYVEGCRCKKQEYY-------------------SAIAAEKPAEDK-- 174
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
+S + ++LRGLPY A + FFV
Sbjct: 175 ------------SSMEYTEVLKLRGLPYSATTEDIIKFFV 202
>gi|324504848|gb|ADY42090.1| Heterogeneous nuclear ribonucleoprotein H2 [Ascaris suum]
Length = 282
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF-INVAGGNN 426
+ L + R +GEA V F + E + AL R K H+ KRYIEV A+ D N+ G
Sbjct: 85 ITLTKNRDARPSGEAFVAFNNNEDYEYALTRDKQHMGKRYIEVFPASASDVEYNITGPER 144
Query: 427 NEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
G I+R+RGLPY CT ++ FF + + VL GK
Sbjct: 145 RLRMGISLPGRDTSIVRLRGLPYGCTNDEITRFFHPIPIAANGI------VLPYDHRSGK 198
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFV F + + A +AL +++ +I RYIE+F S+ E+ + L EL + S
Sbjct: 199 ATGDAFVAFYEPDSAARALERNRNNIQHRYIEVFPSSYGEMLRAL----ELEEGRSSAWR 254
Query: 546 NNGLSAQQPMLSHLAQ 561
+ S + LS+ A+
Sbjct: 255 HPRTSPYERPLSYEAR 270
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++++ RGLP+ CT +++ FF+ + + K D + +G+AFV F
Sbjct: 54 DLVVKCRGLPWSCTEEEIRIFFQPADRSIVKIT-------LTKNRDARPSGEAFVAFNNN 106
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQ 527
E+ + AL++ K+ +G RYIE+F ++ ++V+
Sbjct: 107 EDYEYALTRDKQHMGKRYIEVFPASASDVE 136
>gi|390361161|ref|XP_003729859.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 1
[Strongylocentrotus purpuratus]
Length = 515
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 19/169 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDM--ALKRHKHHIDKRYIEVTKA-NGE-DFI 419
G GV GR +GE V F + H D+ LK++ +HI RYIEV ++ N E +++
Sbjct: 34 GADGVKFVHLPGGRPSGECFVVF--ESHDDVLKGLKKNNNHIGHRYIEVFRSKNSEMEWV 91
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
GG+ + + +R+RGLP++C + DFF+ E+G+
Sbjct: 92 TSRGGDKAKEEN------DGCVRLRGLPFDCRTDDINDFFK-------EYQIAEDGITLP 138
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
DG++TG+A+V F ++ A+ ALSKHK ++G RYIE+F+ +E+++
Sbjct: 139 TDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQCNASEIKR 187
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 41/160 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP+ TA+ ++ FF + G +GV FV P G+ +G+ FV+FE ++
Sbjct: 7 IVRARGLPWSATAEDIVTFFSESV-----IEGGADGVKFVHLPGGRPSGECFVVFESHDD 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
K L K+ IG RYIE+FRS +E++ V ++ + K N+G
Sbjct: 62 VLKGLKKNNNHIGHRYIEVFRSKNSEMEWVTSRGGDKAK-----EENDG----------- 105
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
C+RLRGLP++ ++ FF
Sbjct: 106 --------------------CVRLRGLPFDCRTDDINDFF 125
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY+ T + + FF T + CNV+ ++K +G++TG+A F+ E A
Sbjct: 332 IHMRGLPYKATEEDIHQFF-GQTASPCNVV--------IQKVNGRSTGEADADFQTVEAA 382
Query: 501 DKALSKHKESIGIRYIELFRST 522
A++KHK +G RYIELF +T
Sbjct: 383 QAAMTKHKSEMGPRYIELFLNT 404
>gi|390361163|ref|XP_003729860.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 2
[Strongylocentrotus purpuratus]
Length = 521
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 19/169 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDM--ALKRHKHHIDKRYIEVTKA-NGE-DFI 419
G GV GR +GE V F + H D+ LK++ +HI RYIEV ++ N E +++
Sbjct: 34 GADGVKFVHLPGGRPSGECFVVF--ESHDDVLKGLKKNNNHIGHRYIEVFRSKNSEMEWV 91
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
GG+ + + +R+RGLP++C + DFF+ E+G+
Sbjct: 92 TSRGGDKAKEEN------DGCVRLRGLPFDCRTDDINDFFK-------EYQIAEDGITLP 138
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
DG++TG+A+V F ++ A+ ALSKHK ++G RYIE+F+ +E+++
Sbjct: 139 TDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQCNASEIKR 187
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 41/160 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP+ TA+ ++ FF + G +GV FV P G+ +G+ FV+FE ++
Sbjct: 7 IVRARGLPWSATAEDIVTFFSESV-----IEGGADGVKFVHLPGGRPSGECFVVFESHDD 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
K L K+ IG RYIE+FRS +E++ V ++ + K N+G
Sbjct: 62 VLKGLKKNNNHIGHRYIEVFRSKNSEMEWVTSRGGDKAK-----EENDG----------- 105
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
C+RLRGLP++ ++ FF
Sbjct: 106 --------------------CVRLRGLPFDCRTDDINDFF 125
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY+ T + + FF T + CNV+ ++K +G++TG+A F+ E A
Sbjct: 332 IHMRGLPYKATEEDIHQFF-GQTASPCNVV--------IQKVNGRSTGEADADFQTVEAA 382
Query: 501 DKALSKHKESIGIRYIELFRST 522
A++KHK +G RYIELF +T
Sbjct: 383 QAAMTKHKSEMGPRYIELFLNT 404
>gi|390361159|ref|XP_798587.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 3
[Strongylocentrotus purpuratus]
Length = 500
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 19/169 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDM--ALKRHKHHIDKRYIEVTKA-NGE-DFI 419
G GV GR +GE V F + H D+ LK++ +HI RYIEV ++ N E +++
Sbjct: 34 GADGVKFVHLPGGRPSGECFVVF--ESHDDVLKGLKKNNNHIGHRYIEVFRSKNSEMEWV 91
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
GG+ + + +R+RGLP++C + DFF+ E+G+
Sbjct: 92 TSRGGDKAKEEN------DGCVRLRGLPFDCRTDDINDFFK-------EYQIAEDGITLP 138
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
DG++TG+A+V F ++ A+ ALSKHK ++G RYIE+F+ +E+++
Sbjct: 139 TDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQCNASEIKR 187
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 41/160 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP+ TA+ ++ FF + G +GV FV P G+ +G+ FV+FE ++
Sbjct: 7 IVRARGLPWSATAEDIVTFFSESV-----IEGGADGVKFVHLPGGRPSGECFVVFESHDD 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
K L K+ IG RYIE+FRS +E++ V ++ + K N+G
Sbjct: 62 VLKGLKKNNNHIGHRYIEVFRSKNSEMEWVTSRGGDKAK-----EENDG----------- 105
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
C+RLRGLP++ ++ FF
Sbjct: 106 --------------------CVRLRGLPFDCRTDDINDFF 125
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY+ T + + FF T + CNV+ ++K +G++TG+A F+ E A
Sbjct: 317 IHMRGLPYKATEEDIHQFF-GQTASPCNVV--------IQKVNGRSTGEADADFQTVEAA 367
Query: 501 DKALSKHKESIGIRYIELFRST 522
A++KHK +G RYIELF +T
Sbjct: 368 QAAMTKHKSEMGPRYIELFLNT 389
>gi|351695486|gb|EHA98404.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 348
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 10/134 (7%)
Query: 394 MALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAK 453
MALK + + RY+EV +++G + V + ++ G +R+RGLP+ CT +
Sbjct: 1 MALKNDRESMGHRYLEVFESHGTETDRVLKHSGPDSADSAKGG---FVRLRGLPFGCTKE 57
Query: 454 QVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI 513
+++ FF +G E N G+ P+GK TG+AFV F +E A+KAL KHKE IG
Sbjct: 58 EIVQFF-SGLEIVPN------GITLPVDPEGKITGEAFVQFASQELAEKALRKHKERIGH 110
Query: 514 RYIELFRSTTAEVQ 527
RYIE+F+S+ EV+
Sbjct: 111 RYIEVFKSSQQEVR 124
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF + N + V +P+G+ TG+A V F EEA
Sbjct: 222 VHMRGLPYKATENDIYNFF-----SPLNAVR----VHIEIRPNGRVTGEADVEFATNEEA 272
Query: 501 DKALSKHKESIGI--RYIELFRSTTAEVQQVLNKTMELPKNNSLTS---SNNGLSAQQPM 555
A+SK K+ I RYIELF LN TM N + +S G+SA Q
Sbjct: 273 MAAMSKDKDRTNIQHRYIELF----------LNSTMG-ASNGAYSSQVLQGTGVSAAQAT 321
Query: 556 LSHLAQVPV 564
S L V
Sbjct: 322 YSGLESQSV 330
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + G+ GEA V+F QE + AL++HK I RYIEV K++
Sbjct: 72 GITLPVDPEGKITGEAFVQFASQELAEKALRKHKERIGHRYIEVFKSS 119
>gi|444729174|gb|ELW69601.1| RNA-binding protein 12 [Tupaia chinensis]
Length = 932
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 53/263 (20%)
Query: 284 PINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPL 343
P+NMN+ + PM F P PV P Q+N +V P P NP L
Sbjct: 265 PLNMNSN--MNPM-----FLGPLNPVNPI--------QMNSQSSVK--PLPINPDDLYVS 307
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
V + S + N + + L + V L GR NG +V+F+ + ALKR++ +
Sbjct: 308 VHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLM 367
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG--------------------------- 436
+RY+EV+ A ++ AGG+ Q+ G
Sbjct: 368 IQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQTHPPSQTLPRSKSPSGQKRSRSRSPH 426
Query: 437 -AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 427 EAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFR 479
Query: 496 KEEEADKALSKHKESIGIRYIEL 518
E + AL +HK+ +G R+I++
Sbjct: 480 NEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -------TRG----AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
T G A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNTEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQAVVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|346703322|emb|CBX25419.1| hypothetical_protein [Oryza glaberrima]
Length = 291
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 119 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGFFDSE 178
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T + +I FF E EE
Sbjct: 179 YRHSPPPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFF---VEYELT----EEN 231
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
V +PDGKATG+AFV F E A A+ K K +IG RY+ELF ST E +V ++ +
Sbjct: 232 VHIAYRPDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRVKSRARQ 291
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 86 VRLRGLPFDCDDLDICKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 135
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S H
Sbjct: 136 EFALHRNRQNMGRRYVEVFRCKKQEYYSAI--AAEVNQGGFFDSE----------YRHSP 183
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
P P P +S + ++LRGLPY A + FFV
Sbjct: 184 PPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFFV 223
>gi|149033731|gb|EDL88527.1| G-rich RNA sequence binding factor 1 [Rattus norvegicus]
Length = 281
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 13/134 (9%)
Query: 395 ALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQ 454
AL++H+ ++ +RY+EV + N ED + + L+ G ++R+RGLPY C K
Sbjct: 10 ALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPTPALSDG---VVRLRGLPYSCNEKD 66
Query: 455 VIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-ATGDAFVLFEKEEEADKALSKHKESIGI 513
++DFF AG N++D + FV G+ TG+A+V FE+ E A++AL KH+E IG
Sbjct: 67 IVDFF-AG----LNIVD----ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 117
Query: 514 RYIELFRSTTAEVQ 527
RYIE+F S EV+
Sbjct: 118 RYIEIFPSRRNEVR 131
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 21/86 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFF------EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
+ MRGLP++ A+ +I+FF E S + GKATG+A V
Sbjct: 203 FVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSS---------------GKATGEADVH 247
Query: 494 FEKEEEADKALSKHKESIGIRYIELF 519
F+ E+A A+ K + + RYIELF
Sbjct: 248 FDTHEDAVAAMLKDRSHVQHRYIELF 273
>gi|383858866|ref|XP_003704920.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Megachile rotundata]
Length = 412
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 24/186 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA-NGE-DFINV 421
G GV + +S GR +GEA V E + A KR + H+ RYIEV KA GE +++
Sbjct: 41 GKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVVK 100
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N E +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 101 RSGFNLENAM-----DDACVRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTD 148
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIR----------YIELFRSTTAEVQQVLN 531
G++TG+A+V F ++ A++AL KHKE IG R YIE+FRST +EV+ +
Sbjct: 149 YTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAGFGYIEIFRSTLSEVRASIG 208
Query: 532 KTMELP 537
M P
Sbjct: 209 PKMRGP 214
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 40/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ T +++ FF + C++ +G+ GV +G+ +G+A+V + E+
Sbjct: 14 VVKLRGLPWSTTVDEIMKFF-----SDCSISNGKNGVHMTMSREGRPSGEAYVEMDTPED 68
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA + ++ +G RYIE+F++ E++ V+ ++ G + + M
Sbjct: 69 IEKACKRDRDHMGHRYIEVFKAKRGEMEWVVKRS--------------GFNLENAMDDA- 113
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 114 --------------------CVRLRGLPFGCSKEEIAQFFSG 135
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ I++F + + + GVHM + +G+PSGEA+++MD+ + + +R+ +
Sbjct: 24 TTVDEIMKFFSDCSISNGKNGVHMTMSREGRPSGEAYVEMDTPED--IEKACKRDRDHM- 80
Query: 120 GKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 81 --GHRYIEVFKAKRGEMEWVV 99
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP++ T + + DFF NV + + G+ +G+A V F EEA
Sbjct: 294 IHMRGLPFKATEQDIADFFRP--IEPVNVR-------IILENGGRPSGEADVEFATHEEA 344
Query: 501 DKALSKHKESIGIRYIELF 519
KA+SK K + RYIELF
Sbjct: 345 MKAMSKDKSHMSHRYIELF 363
>gi|126328002|ref|XP_001371131.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 466
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ + G+ +GEA V ++ +ALK+ + + RY+EV +++ + V
Sbjct: 42 GIHFVYTREGKLSGEAFVELKSEDEITLALKKDRETMGHRYVEVFRSSNIEMDWVL---K 98
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
+ A L + +R+RGLP+ C ++++ FF +G E N G+ G+
Sbjct: 99 HTAPNSLDTASDGFVRLRGLPFRCNKEEIVQFF-SGLEIMPN------GITLPVDFQGRN 151
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+G+AFV F +E A+KAL K+KE+IG RYIE+F+S+ AE Q
Sbjct: 152 SGEAFVQFASQEIAEKALKKNKETIGHRYIEIFKSSQAEAQ 192
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 72/117 (61%), Gaps = 10/117 (8%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T+G + ++++RGLP+ C+A + FF + C +++ E G+ FV +GK +G+AFV
Sbjct: 5 TKGEEGFVVKVRGLPWSCSASDIQQFF-----SECKILNEEAGIHFVYTREGKLSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
+ E+E AL K +E++G RY+E+FRS+ E+ VL T NSL ++++G
Sbjct: 60 ELKSEDEITLALKKDRETMGHRYVEVFRSSNIEMDWVLKHTAP----NSLDTASDGF 112
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 22/135 (16%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + DFF + G PDG+ TG+A V F E+A
Sbjct: 284 VHMRGLPYKATENDICDFFSPLKPVGAYIEIG---------PDGRVTGEADVEFATHEDA 334
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ------------QVLNK-TMELPKNNSLTSSNN 547
A+SK K ++ RYIELF ++T E +LN+ T +P N L
Sbjct: 335 VAAMSKDKANMQHRYIELFLNSTIEADSNVYDPQMGGGMSLLNQSTYGIPPNQELNEGYG 394
Query: 548 GLSAQQPMLSHLAQV 562
G+S ++ QV
Sbjct: 395 GVSEGHISMNKYDQV 409
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H VY +G+ SGEAF+++ SE LA L+ +R + RY+EVF+ S +M+ V
Sbjct: 42 GIHFVYTREGKLSGEAFVELKSEDEITLA--LKKDRETM---GHRYVEVFRSSNIEMDWV 96
Query: 140 LNGVLP 145
L P
Sbjct: 97 LKHTAP 102
>gi|115484017|ref|NP_001065670.1| Os11g0133600 [Oryza sativa Japonica Group]
gi|77548595|gb|ABA91392.1| heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza
sativa Japonica Group]
gi|113644374|dbj|BAF27515.1| Os11g0133600 [Oryza sativa Japonica Group]
gi|215764972|dbj|BAG86669.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615462|gb|EEE51594.1| hypothetical protein OsJ_32846 [Oryza sativa Japonica Group]
Length = 298
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 127 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGFFDSE 186
Query: 436 GAQV-------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
++++RGLPY T + +I FF E EE V
Sbjct: 187 YRHSPPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFF---VEYELT----EENV 239
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+PDGKATG+AFV F E A A+ K K +IG RY+ELF ST E + ++ +
Sbjct: 240 HIAYRPDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRARQ 298
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 94 VRLRGLPFDCDDLDIFKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 143
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S H +
Sbjct: 144 EFALHRNRQNMGRRYVEVFRCKKQEYYSAI--AAEVNQGGFFDSE----------YRH-S 190
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
P P P +S + ++LRGLPY A + FFV
Sbjct: 191 PPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFFV 230
>gi|51467948|ref|NP_001003856.1| RNA-binding protein 12 [Danio rerio]
gi|31324618|gb|AAP48571.1| swan [Danio rerio]
gi|190336635|gb|AAI62473.1| RNA binding motif protein 12 [Danio rerio]
gi|190337822|gb|AAI62102.1| RNA binding motif protein 12 [Danio rerio]
Length = 876
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMA 395
NP + + S+L + I + LG+ + L GR +G A+V+F A
Sbjct: 298 NPDDFYVHLHGLPFSVLEHEIRDFFHGLGIESIRLLKDNLGRNSGRALVKFYSPHESFEA 357
Query: 396 LKRHKHHIDKRYIEVTKANGEDFINVAG----GNNNEAQAFLTRGA-------------- 437
LKR+ I +RYIEV+ A + G G ++E R A
Sbjct: 358 LKRNAGMIGQRYIEVSPATERQWRESVGHSKAGGDSEHNRHRRRSANSPTPSSGERARSR 417
Query: 438 -----QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+ ++GLPYE KQ+ +FF+ N+ E+ + P+G+ATG+ FV
Sbjct: 418 SPHKLDYCVYLKGLPYEAENKQIFEFFK-------NLDIVEDSIYIAYGPNGRATGEGFV 470
Query: 493 LFEKEEEADKALSKHKESIGIRYIE---LFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
F E + AL H + +G R+I+ + + E + K M+ + + +SS G
Sbjct: 471 EFRNEMDYKAALGCHMQYMGSRFIQVHPITKKNMYEKIDAIRKRMQGSQGDQKSSSGGGK 530
Query: 550 SAQQPMLSHLAQVP 563
SA+ +H+ +P
Sbjct: 531 SAKS--CAHITNIP 542
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 22/163 (13%)
Query: 430 QAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGD 489
++ +T + + GLP+ ++ DFF G E + +K G+ +G
Sbjct: 293 KSAITNPDDFYVHLHGLPFSVLEHEIRDFFHG---------LGIESIRLLKDNLGRNSGR 343
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
A V F E+ +AL ++ IG RYIE+ +T + ++ + S G
Sbjct: 344 ALVKFYSPHESFEALKRNAGMIGQRYIEVSPATERQWRESVGH-----------SKAGGD 392
Query: 550 SAQQPMLSHLAQVPVPYLPQHIITSGTRK--DCIRLRGLPYEA 590
S A P P + + K C+ L+GLPYEA
Sbjct: 393 SEHNRHRRRSANSPTPSSGERARSRSPHKLDYCVYLKGLPYEA 435
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINV------AGGNN 426
GR GE V F ++ AL H ++ R+I+V TK N + I+ +
Sbjct: 462 GRATGEGFVEFRNEMDYKAALGCHMQYMGSRFIQVHPITKKNMYEKIDAIRKRMQGSQGD 521
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
++ + + A+ + +PY T K V F + + EE + + +G
Sbjct: 522 QKSSSGGGKSAKSCAHITNIPYNVTKKDVRLFLDG-------IELFEESLKVLVDSNGNG 574
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIR 514
G A V F+ +E+A KA H++ + R
Sbjct: 575 LGQAIVQFKSDEDALKAERLHRQKLNGR 602
>gi|291389582|ref|XP_002711385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Oryctolagus
cuniculus]
Length = 415
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + YI+V K++ D++
Sbjct: 39 GATGVHFIYAREGRQSGEAFVELESEDDVKMALKKDRESTGHPYIKVFKSHRTELDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
+ K TG+AFV F +E A+KAL KHKE IG R IE+F+S+ EV+ + ++
Sbjct: 147 SEDKITGEAFVQFASQEVAEKALGKHKERIGHRSIEVFKSSQEEVRSYSDPALKF 201
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGATGVHFIYAREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES G YI++F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKMALKKDRESTGHPYIKVFKSHRTELDWVLKHS----GPNSADTANDGF 112
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+RMRGLPY+ T + +FF ++ G PD + TG+A V F E A
Sbjct: 291 VRMRGLPYKATENHIYNFFSPLNPVRVHIEIG---------PDERVTGEADVEFATHEGA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ R IELF ++T
Sbjct: 342 VAAMSKDRANMQHRCIELFLNST 364
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE +A L+ +R
Sbjct: 24 IEDVQNFLSDCTIHDGATGVHFIYAREGRQSGEAFVELESEDDVKMA--LKKDREST--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
YI+VF+ +++ VL
Sbjct: 79 GHPYIKVFKSHRTELDWVLK 98
>gi|229368727|gb|ACQ63010.1| RNA binding motif protein 12, isoform 2 (predicted) [Dasypus
novemcinctus]
Length = 900
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 53/263 (20%)
Query: 284 PINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPL 343
PINMN L PM F P PV P Q+N +V P P NP L
Sbjct: 265 PINMNNN--LNPM-----FLGPLNPVNPI--------QMNSQSSVK--PLPINPDDLYVS 307
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
V + S + N + + L + V L GR NG +V+F+ + ALKR++ +
Sbjct: 308 VHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLM 367
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG--------------------------- 436
+RY+EV+ A ++ AGG+ Q G
Sbjct: 368 IQRYVEVSPATERQWV-AAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPH 426
Query: 437 -AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 427 EAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFR 479
Query: 496 KEEEADKALSKHKESIGIRYIEL 518
E + AL +HK+ +G R+I++
Sbjct: 480 NEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 24/169 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEA--GTENSCNVMDGEEGVLFVK 480
A+V + +P+ T V+ F E ENS +V+
Sbjct: 528 QREMMLNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEGIPVDENSVHVLVDN------- 580
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 --NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHIVTLEDMREI 627
>gi|170035383|ref|XP_001845549.1| G-rich sequence factor-1 [Culex quinquefasciatus]
gi|167877365|gb|EDS40748.1| G-rich sequence factor-1 [Culex quinquefasciatus]
Length = 508
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 11/151 (7%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG 436
R+ GEA +R + + AL +K I RYIEV AN + + N+ + G
Sbjct: 55 RQTGEAYLRLPTLDDQIKALDLNKATIGHRYIEVFTANEDQYEQAV----NDGEGDEDGG 110
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++++RGLP+ CT + + FF T + +G G+L + G+A+G+A V F
Sbjct: 111 P--VLKLRGLPWSCTKEDIKRFFVGLT-----IKNGINGILLLTDQLGRASGEAIVEFAT 163
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
E +A++A++K KE IG RYIELFRS+T E++
Sbjct: 164 EADAEQAMNKQKEKIGSRYIELFRSSTREMK 194
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ +RG+P+ C + + DFF N+ G+ +G+ FE EEA
Sbjct: 426 VHLRGMPFSCDDQDIQDFFMPLRPVKANI---------EYDSRGRPSGEGNAYFETVEEA 476
Query: 501 DKALSKHKESIGIRYIELF 519
KA+ KHKE +G RYIELF
Sbjct: 477 MKAMKKHKEKMGSRYIELF 495
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLP+ T + + DF + ++ G+ + K + TG+A++ ++
Sbjct: 19 IRLRGLPWNITEQDIRDFLQGVQVEHVHI-----GINAMTK---RQTGEAYLRLPTLDDQ 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
KAL +K +IG RYIE+F + + +Q +N
Sbjct: 71 IKALDLNKATIGHRYIEVFTANEDQYEQAVN 101
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ G+ L GR +GEAIV F + + A+ + K I RYIE+ +++
Sbjct: 139 GINGILLLTDQLGRASGEAIVEFATEADAEQAMNKQKEKIGSRYIELFRSS 189
>gi|170586440|ref|XP_001897987.1| RNA recognition motif. [Brugia malayi]
gi|158594382|gb|EDP32966.1| RNA recognition motif [Brugia malayi]
Length = 573
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---- 418
L + L++ GR +GE V DQE A K ++ I+ RYIEV + +
Sbjct: 28 LNAKSITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRYIEVFSVSDAELLMMI 87
Query: 419 ----INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
I +GG + +++ + ++R+RGLPY T + +FF +G E + V+D
Sbjct: 88 RHGVIKSSGGGDADSRY----ASNFVVRLRGLPYSATIDDIKEFF-SGLEVADAVID--- 139
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM 534
K+P G+ +G+AFV +E A+ AL + K +G RY+E+FRS+ E+
Sbjct: 140 -----KEPGGRPSGEAFVRLATKEYAELALERSKNYMGSRYVEVFRSSADEMDNSYYAAR 194
Query: 535 ELP 537
+P
Sbjct: 195 GIP 197
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 40/173 (23%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLP+ + FF ++ + F +G+A+G+ +V + +E
Sbjct: 8 IRLRGLPFAAKEQDFFFFFGLNAKS----------ITFTLTSNGRASGECYVELDDQEAV 57
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+A + I RYIE+F + AE+ ++ + + S+ G A S+
Sbjct: 58 KEAQKLDRNEINGRYIEVFSVSDAELLMMIR--------HGVIKSSGGGDADSRYASNF- 108
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKVP 611
+RLRGLPY A + FF G + D+ + K P
Sbjct: 109 -------------------VVRLRGLPYSATIDDIKEFFSGLEVADAVIDKEP 142
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMN---LVLNGVLP 145
G+PSGEAF+++ ++ A LA L ++N + RY+EVF+ S ++M+ G+ P
Sbjct: 144 GRPSGEAFVRLATKEYAELA--LERSKNYM---GSRYVEVFRSSADEMDNSYYAARGIPP 198
Query: 146 PTS 148
PTS
Sbjct: 199 PTS 201
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V + MRGLPY T + +FF N ++ + G + + +GDA V F
Sbjct: 273 VKVFMRGLPYSVTTLDIEEFFRP-----LNCVEIKLGY----NEERRLSGDALVTFSTMA 323
Query: 499 EADKALSKHKESIGIRYIELFRSTTAE----VQQVLNKTMELPKNNSLTSSNN 547
EA +ALS++K ++G R R+T+ + Q + KT E N T+ +
Sbjct: 324 EAREALSRNKNNMGTRRSGWSRATSTKQVRVEQGLFGKTKEHSLNRVCTTETS 376
>gi|148674224|gb|EDL06171.1| mCG5227, isoform CRA_a [Mus musculus]
gi|148674225|gb|EDL06172.1| mCG5227, isoform CRA_a [Mus musculus]
Length = 773
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 516
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 517 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 567
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 568 PVDESAVHVLVD 579
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|37360080|dbj|BAC98018.1| mKIAA0765 protein [Mus musculus]
Length = 569
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 198 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 255
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 256 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 314
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 315 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 367
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 368 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 427
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 428 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 478
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 479 PVDENAVHVLVD 490
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 20/152 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 379 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 438
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 439 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 491
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIR 514
+G+ G A V F+ E++A K+ H++ + R
Sbjct: 492 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGR 523
>gi|26325168|dbj|BAC26338.1| unnamed protein product [Mus musculus]
Length = 841
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 131 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 188
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 189 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 247
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 248 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 300
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 301 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 360
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 361 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 411
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 412 PVDESAVHVLVD 423
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 312 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 371
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 372 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 424
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 425 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 471
>gi|74202595|dbj|BAE24862.1| unnamed protein product [Mus musculus]
Length = 171
Score = 85.5 bits (210), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSK 506
G++TG+AFV F +E A+KAL K
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKK 171
Score = 52.4 bits (124), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 25 EEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---G 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
>gi|388513407|gb|AFK44765.1| unknown [Medicago truncatula]
Length = 158
Score = 85.5 bits (210), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 26/162 (16%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAF---------------LTRGA 437
+ AL+R + ++ +RY+EV + +D+ N G N + +
Sbjct: 4 EFALQRDRQNMGRRYVEVFRCKKQDYYNAVAGEINYEGIYDDDYQGSPPPSRSKRFSDKE 63
Query: 438 QV----IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
Q+ I++MRGLP+ T Q+IDFF+ +++G V +PDGKATG+A+V
Sbjct: 64 QMDYTEILKMRGLPFLVTKSQIIDFFK-----DYKLIEGR--VHIACRPDGKATGEAYVE 116
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
F +EA +A+ K K +IG RY+ELF ST E ++ +++ +
Sbjct: 117 FVSPDEAKRAMFKDKMTIGSRYVELFPSTPDEARRAESRSRQ 158
>gi|211830818|gb|AAH26891.2| Rbm12 protein [Mus musculus]
Length = 887
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 172 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 229
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 230 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 288
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 289 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 341
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 342 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 401
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 402 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 452
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 453 PVDENAVHVLVD 464
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 353 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 412
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 413 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 465
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 466 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 512
>gi|114155120|ref|NP_083673.3| RNA-binding protein 12 [Mus musculus]
gi|114155125|ref|NP_733486.2| RNA-binding protein 12 [Mus musculus]
gi|262527571|sp|Q8R4X3.3|RBM12_MOUSE RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|26348755|dbj|BAC38017.1| unnamed protein product [Mus musculus]
gi|30851612|gb|AAH52473.1| RNA binding motif protein 12 [Mus musculus]
Length = 992
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 516
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 517 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 567
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 568 PVDESAVHVLVD 579
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|74184867|dbj|BAE39056.1| unnamed protein product [Mus musculus]
Length = 914
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 209 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 266
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 267 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 325
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 326 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 378
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 379 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 438
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 439 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 489
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 490 PVDESAVHVLVD 501
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 390 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 449
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 450 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 502
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 503 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 549
>gi|26330362|dbj|BAC28911.1| unnamed protein product [Mus musculus]
Length = 992
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 516
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 517 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 567
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 568 PVDESAVHVLVD 579
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|380029403|ref|XP_003698363.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Apis florea]
Length = 413
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + +S GR +GEA V E + A KR + H+ RYIEV KA + V
Sbjct: 41 GKNGVHMTMSREGRPSGEAYVEMDTLEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVVK 100
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 101 RSGMNLENAMDDGC---VRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTDYT 150
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIR----------YIELFRSTTAEVQQVLNKT 533
G++TG+A+V F ++ A++AL KHKE IG R YIE+FRS+ +EV+ +
Sbjct: 151 GRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAGFGYIEIFRSSLSEVRASIGPK 210
Query: 534 MELP 537
M P
Sbjct: 211 MRGP 214
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 40/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ T +++ FF + C++ +G+ GV +G+ +G+A+V + E+
Sbjct: 14 VVKLRGLPWSTTVDEIMKFF-----SDCSITNGKNGVHMTMSREGRPSGEAYVEMDTLED 68
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA + ++ +G RYIE+F++ E++ V+ ++ G++ + M
Sbjct: 69 IEKACKRDRDHMGHRYIEVFKAKRGEMEWVVKRS--------------GMNLENAM---- 110
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 111 -----------------DDGCVRLRGLPFGCSKEEIAQFFSG 135
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP++ T + + DFF NV + + G+ +G+A V F EEA
Sbjct: 296 IHMRGLPFKATEQDIADFFRP--IEPVNVR-------IILENGGRPSGEADVEFATHEEA 346
Query: 501 DKALSKHKESIGIRYIELF 519
KA+SK K + RYIELF
Sbjct: 347 VKAMSKDKSHMSHRYIELF 365
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ I++F + + GVHM + +G+PSGEA+++MD+ + + +R+ +
Sbjct: 24 TTVDEIMKFFSDCSITNGKNGVHMTMSREGRPSGEAYVEMDTLED--IEKACKRDRDHM- 80
Query: 120 GKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 81 --GHRYIEVFKAKRGEMEWVV 99
>gi|184185561|gb|ACC68959.1| RNA-binding protein 12 (predicted) [Rhinolophus ferrumequinum]
Length = 946
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAVENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGP 397
Query: 435 RG-----AQVIIR-----------------------MRGLPYECTAKQVIDFFEAGTENS 466
G Q + R ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEPGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + ALS+HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALSRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALSRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 436 GAQVIIRMRG-------------LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
++++ G +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSTKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLQDMREI 627
>gi|346703709|emb|CBX24377.1| hypothetical_protein [Oryza glaberrima]
Length = 291
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 119 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGFFDSE 178
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T +++I FF E +E
Sbjct: 179 YRHSPPPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEEIIKFF---VEYELT----DEN 231
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
V V +PDGKATG+A+V F E A A+ K K +IG RY+ELF ST E + ++ +
Sbjct: 232 VHIVYRPDGKATGEAYVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRVRQ 291
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 86 VRLRGLPFDCDDLDICKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 135
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S H
Sbjct: 136 EFALHRNRQNMGRRYVEVFRCKKQEYYSAI--AAEVNQGGFFDSE----------YRHSP 183
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKV 610
P P P +S + ++LRGLPY A + FFV + D VH V
Sbjct: 184 PPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEEIIKFFVEYELTDENVHIV 235
>gi|301762096|ref|XP_002916483.1| PREDICTED: RNA-binding protein 12-like [Ailuropoda melanoleuca]
gi|281346062|gb|EFB21646.1| hypothetical protein PANDA_004540 [Ailuropoda melanoleuca]
Length = 923
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|410953920|ref|XP_003983616.1| PREDICTED: RNA-binding protein 12-like isoform 1 [Felis catus]
Length = 1482
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 53/318 (16%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++ T +
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGM 510
Query: 527 QQVLNKTMELPKNNSLTSSN-----NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCI 581
+ ++ + +N S G + + +H+ +P S T+ D +
Sbjct: 511 LEKIDMIRKRLQNFSYDQREMMLNPEGDVSSAKVCAHITNIPF---------SITKMDVL 561
Query: 582 R-LRGLPYE--ALCILMD 596
+ L G+P + A+ +L+D
Sbjct: 562 QFLEGIPVDENAVHVLVD 579
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|19070198|gb|AAL83754.1| SWAN [Mus musculus]
gi|21666374|gb|AAM73683.1| swan [Mus musculus]
gi|21666376|gb|AAM73684.1| swan [Mus musculus]
Length = 1003
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 516
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 517 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 567
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 568 PVDENAVHVLVD 579
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|284520924|ref|NP_001165219.1| RNA-binding protein 12 [Canis lupus familiaris]
Length = 923
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|312094676|ref|XP_003148104.1| hypothetical protein LOAG_12543 [Loa loa]
Length = 304
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-----NVA 422
+ L++ GR +GE V DQE A K ++ I+ RYIEV + + + V
Sbjct: 49 ITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRYIEVFSVSDAELLMMIRHGVI 108
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
G+ +A + + ++R+RGLPY T + +FF +G E + V+D K+P
Sbjct: 109 KGSGGDADS--RYASNFVVRLRGLPYSATIDDIKEFF-SGLEVADAVID--------KEP 157
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
G+ +G+AFV +E A+ AL + K +G RY+E+FRS+ E+ +P
Sbjct: 158 GGRPSGEAFVRLATKEYAELALERSKNYMGSRYVEVFRSSADEMDNSYYAARGIP 212
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 37/179 (20%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGT----ENSCNVMDG--EEGVLFVKKPDGKATGDAFVLF 494
IR+RGLP+ + V DF + + + G + + F +G+A+G+ +V
Sbjct: 8 IRLRGLPFAAKEQDVRDFLQDISIWFLRYRSFFLFGLNAKSITFTLTSNGRASGECYVEL 67
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
+ +E +A + I RYIE+F + AE+ ++ + +G A
Sbjct: 68 DDQEAVKEAQKLDRNEINGRYIEVFSVSDAELLMMIRHGV---------IKGSGGDADSR 118
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKVP 611
S+ +RLRGLPY A + FF G + D+ + K P
Sbjct: 119 YASNF--------------------VVRLRGLPYSATIDDIKEFFSGLEVADAVIDKEP 157
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMN---LVLNGVLP 145
G+PSGEAF+++ ++ A LA L ++N + RY+EVF+ S ++M+ G+ P
Sbjct: 159 GRPSGEAFVRLATKEYAELA--LERSKNYM---GSRYVEVFRSSADEMDNSYYAARGIPP 213
Query: 146 PTS 148
PTS
Sbjct: 214 PTS 216
>gi|426241394|ref|XP_004014576.1| PREDICTED: RNA-binding protein 12 isoform 1 [Ovis aries]
Length = 931
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V +P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKPLPI--NPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGPSGQTHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQPLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVTSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|426241396|ref|XP_004014577.1| PREDICTED: RNA-binding protein 12 isoform 2 [Ovis aries]
Length = 926
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V +P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKPLPI--NPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGPSGQTHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQPLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVTSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|284519716|ref|NP_001165217.1| RNA-binding protein 12 [Equus caballus]
Length = 928
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPNGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDS 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKSEDDARKSERLHRKKLNGREAFVHVVTVEDMREI 627
>gi|190402267|gb|ACE77677.1| RNA binding motif protein 12, isoform 1 (predicted) [Sorex araneus]
Length = 1520
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 53/318 (16%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSGVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++ T +
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGSRFIQVHPITKKGM 510
Query: 527 QQVLNKTMELPKNNSLTSSN-----NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCI 581
+ ++ + +N S G + + +H+ +P S T+ D +
Sbjct: 511 LEKIDMIRKRLQNFSYDQREMMLNPEGDVSSAKVCAHITNIPF---------SITKMDVL 561
Query: 582 R-LRGLPYE--ALCILMD 596
+ L G+P + A+ +L+D
Sbjct: 562 QFLEGIPVDENAVHVLVD 579
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGSRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|312032395|ref|NP_001185821.1| RNA-binding protein 12 [Bos taurus]
Length = 953
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V +P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKPLPI--NPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGPSGQTHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQPLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVTSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|284004917|ref|NP_001164804.1| RNA-binding protein 12 [Oryctolagus cuniculus]
gi|217038336|gb|ACJ76629.1| RNA binding motif protein 12 (predicted) [Oryctolagus cuniculus]
Length = 940
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGP 397
Query: 435 RG-----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTEN 465
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK----- 452
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 KLDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 503
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 20/152 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 469 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 528
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 529 QREMMLNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 581
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIR 514
+G+ G A V F+ E++A K+ H++ + R
Sbjct: 582 NGQGLGQALVQFKNEDDARKSEHLHRKKLNGR 613
>gi|83320105|ref|NP_001032746.1| RNA-binding protein 12 [Rattus norvegicus]
gi|31324614|gb|AAP48569.1| swan [Rattus norvegicus]
gi|149030841|gb|EDL85868.1| rCG37481, isoform CRA_a [Rattus norvegicus]
gi|149030844|gb|EDL85871.1| rCG37481, isoform CRA_a [Rattus norvegicus]
Length = 1032
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQV 502
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|417413254|gb|JAA52964.1| Putative rna binding protein rbm12/swan, partial [Desmodus
rotundus]
Length = 960
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V P P NP L V + S + N + + L + V L GR NG
Sbjct: 309 QVNSQSSVK--PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNG 366
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 367 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGPSGQTHP 425
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 426 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 478
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 479 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 524
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 490 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 549
Query: 436 GAQVIIRMRG-------------LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
++++ G +P+ T V+ F E + E V +
Sbjct: 550 QREMMLNPEGDVSSTKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 602
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 603 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHIVTLEDMREI 649
>gi|431894345|gb|ELK04145.1| RNA-binding protein 12 [Pteropus alecto]
Length = 899
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V P P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QVNSQSSVK--PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGPSGQTHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
>gi|354477974|ref|XP_003501192.1| PREDICTED: RNA-binding protein 12 [Cricetulus griseus]
Length = 1463
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPV--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGYCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 516
Query: 533 TMELPKNNSLTSSN-----NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S G + + +H+ +P S T+ D ++ L G+
Sbjct: 517 IRKRLQNFSYDQREMVLNPEGDVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 567
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 568 PVDESAVHVLVD 579
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMVLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDARKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|344246677|gb|EGW02781.1| RNA-binding protein 12 [Cricetulus griseus]
Length = 997
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPV--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGYCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQV 502
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMVLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDARKSEHLHRKKLNGREAFVHIVTLEDMREI 627
>gi|335310367|ref|XP_003361999.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Sus
scrofa]
Length = 444
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N M
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPNGM----------- 141
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 142 XXXXXXXXAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 286 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 336
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 337 VAAMAKDKANMQHRYVELFLNSTA 360
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
>gi|332248953|ref|XP_003273629.1| PREDICTED: RNA-binding protein 12-like isoform 7 [Nomascus
leucogenys]
Length = 932
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|393910110|gb|EJD75743.1| RNA recognition domain-containing protein [Loa loa]
Length = 674
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI--- 419
L + L++ GR +GE V DQE A K ++ I+ RYIEV + + +
Sbjct: 44 LNAKSITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRYIEVFSVSDAELLMMI 103
Query: 420 --NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
V G+ +A + + ++R+RGLPY T + +FF +G E + V+D
Sbjct: 104 RHGVIKGSGGDADSRY--ASNFVVRLRGLPYSATIDDIKEFF-SGLEVADAVID------ 154
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
K+P G+ +G+AFV +E A+ AL + K +G RY+E+FRS+ E+
Sbjct: 155 --KEPGGRPSGEAFVRLATKEYAELALERSKNYMGSRYVEVFRSSADEM 201
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMD------GEEGVLFVKKPDGKATGDAFVLF 494
IR+RGLP+ + V DF + + + + F +G+A+G+ +V
Sbjct: 8 IRLRGLPFAAKEQDVRDFLQDISIWFLRYRSFFLFGLNAKSITFTLTSNGRASGECYVEL 67
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
+ +E +A + I RYIE+F + AE+ ++ + +G A
Sbjct: 68 DDQEAVKEAQKLDRNEINGRYIEVFSVSDAELLMMIRHGV---------IKGSGGDADSR 118
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKVP 611
S+ +RLRGLPY A + FF G + D+ + K P
Sbjct: 119 YASNF--------------------VVRLRGLPYSATIDDIKEFFSGLEVADAVIDKEP 157
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMN---LVLNGVLP 145
G+PSGEAF+++ ++ A LA L ++N + RY+EVF+ S ++M+ G+ P
Sbjct: 159 GRPSGEAFVRLATKEYAELA--LERSKNYM---GSRYVEVFRSSADEMDNSYYAARGIPP 213
Query: 146 PTS 148
PTS
Sbjct: 214 PTS 216
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V + MRGLPY T + +FF N ++ + G + + +GDA V F
Sbjct: 288 VKVFMRGLPYSVTTLDIEEFF-----RPLNCVEIKLGY----NEERRLSGDALVSFSTMA 338
Query: 499 EADKALSKHKESIGIRYIELFRSTTAE-VQQVLNKTMELPKNNSLTSSNNGLSAQQPM 555
EA +ALS++K ++G R + R+ +E + +L K + K N + L Q M
Sbjct: 339 EAREALSRNKNNMGTRIKKRKRTRISEGTKMLLRKRRAMKKENQMNDEYAALCKQIRM 396
>gi|428185861|gb|EKX54712.1| hypothetical protein GUITHDRAFT_57099, partial [Guillardia theta
CCMP2712]
Length = 203
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG-- 424
G+ S GR GEA V F + + AL + H+ RY+EV K+N D + + G
Sbjct: 29 GIFFTSSRDGRPTGEAFVIFERDDEGEKALSLDRKHMGTRYVEVFKSNKPDLVRLCAGCV 88
Query: 425 ----------------NNNEAQAFLTRGA----QVIIRMRGLPYECTAKQVIDFFEAGTE 464
+ + G+ +++++RGLPY V DFF
Sbjct: 89 PAVAPSMPPSLPPSLPPHPHPHSHPMPGSLAAKDLVVKVRGLPYSAKEADVFDFF----- 143
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
C+ GV ++ G+++GDA+V EEE +AL+ H+ + G RY+E+FR++ A
Sbjct: 144 --CSSNVRPSGVNLIQNARGESSGDAYVELGSEEEVMRALALHRSNFGHRYLEIFRTSRA 201
Query: 525 EV 526
EV
Sbjct: 202 EV 203
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+RMRGLP+ + + +FF ++ G+ F DG+ TG+AFV+FE+++E
Sbjct: 1 IVRMRGLPFSVREEDIREFFSG-------LLVRPHGIFFTSSRDGRPTGEAFVIFERDDE 53
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEV 526
+KALS ++ +G RY+E+F+S ++
Sbjct: 54 GEKALSLDRKHMGTRYVEVFKSNKPDL 80
Score = 42.0 bits (97), Expect = 0.94, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 73 ASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCS 132
+SN+ GV+++ N++G+ SG+A++++ SE A L H N FG RY+E+F+ S
Sbjct: 145 SSNVRPSGVNLIQNARGESSGDAYVELGSEEEVMRALAL-HRSN--FG--HRYLEIFRTS 199
>gi|197100361|ref|NP_001125474.1| RNA-binding protein 12 [Pongo abelii]
gi|75070796|sp|Q5RBM8.1|RBM12_PONAB RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12
gi|55728164|emb|CAH90832.1| hypothetical protein [Pongo abelii]
Length = 932
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|71121745|gb|AAH99792.1| Hnrph1 protein [Rattus norvegicus]
Length = 184
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
G N+ A +R+RGLP+ C+ ++++ FF
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFFSG 133
>gi|149052457|gb|EDM04274.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_c [Rattus
norvegicus]
Length = 134
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
G N+ A +R+RGLP+ C+ ++++ FF
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFFSG 133
>gi|332248945|ref|XP_003273625.1| PREDICTED: RNA-binding protein 12-like isoform 3 [Nomascus
leucogenys]
Length = 1466
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|50949507|emb|CAH10603.1| hypothetical protein [Homo sapiens]
Length = 954
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 301 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 360
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 361 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 419
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 420 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 474
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 475 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 524
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 490 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 549
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 550 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 602
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 603 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 649
>gi|12053991|emb|CAC20441.1| RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKTERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|74136241|ref|NP_001028012.1| RNA-binding protein 12 [Macaca mulatta]
gi|30173333|sp|Q8SQ27.1|RBM12_MACMU RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|19070196|gb|AAL83753.1| SWAN [Macaca mulatta]
gi|355563178|gb|EHH19740.1| RNA-binding motif protein 12 [Macaca mulatta]
gi|355784534|gb|EHH65385.1| RNA-binding motif protein 12 [Macaca fascicularis]
gi|380808606|gb|AFE76178.1| RNA-binding protein 12 [Macaca mulatta]
gi|380808608|gb|AFE76179.1| RNA-binding protein 12 [Macaca mulatta]
gi|384944626|gb|AFI35918.1| RNA-binding protein 12 [Macaca mulatta]
gi|384944628|gb|AFI35919.1| RNA-binding protein 12 [Macaca mulatta]
Length = 932
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|20521648|dbj|BAA34485.2| KIAA0765 protein [Homo sapiens]
Length = 952
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 299 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 358
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 359 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 417
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 418 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 472
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 473 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 522
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 488 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 547
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 548 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 600
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 601 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 647
>gi|19923345|ref|NP_006038.2| RNA-binding protein 12 [Homo sapiens]
gi|23510462|ref|NP_690051.1| RNA-binding protein 12 [Homo sapiens]
gi|311893287|ref|NP_001185767.1| RNA-binding protein 12 [Homo sapiens]
gi|312032348|ref|NP_001185769.1| RNA-binding protein 12 [Homo sapiens]
gi|353411938|ref|NP_001238775.1| RNA-binding protein 12 [Pan troglodytes]
gi|397523818|ref|XP_003831915.1| PREDICTED: RNA-binding protein 12 [Pan paniscus]
gi|30173387|sp|Q9NTZ6.1|RBM12_HUMAN RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|15215375|gb|AAH12787.1| RNA binding motif protein 12 [Homo sapiens]
gi|15559252|gb|AAH13981.1| RNA binding motif protein 12 [Homo sapiens]
gi|19070194|gb|AAL83752.1| SWAN [Homo sapiens]
gi|19070200|gb|AAL83755.1| SWAN [Homo sapiens]
gi|21666372|gb|AAM73682.1| swan [Homo sapiens]
gi|119596588|gb|EAW76182.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|119596590|gb|EAW76184.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|119596594|gb|EAW76188.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|123993635|gb|ABM84419.1| RNA binding motif protein 12 [synthetic construct]
gi|123999855|gb|ABM87436.1| RNA binding motif protein 12 [synthetic construct]
gi|168278717|dbj|BAG11238.1| RNA binding motif protein 12 [synthetic construct]
gi|193787298|dbj|BAG52504.1| unnamed protein product [Homo sapiens]
gi|410216986|gb|JAA05712.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410216988|gb|JAA05713.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410260650|gb|JAA18291.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410260652|gb|JAA18292.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410297724|gb|JAA27462.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410297726|gb|JAA27463.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410355577|gb|JAA44392.1| RNA binding motif protein 12 [Pan troglodytes]
Length = 932
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|410562529|pdb|2LXU|A Chain A, Solution Nmr Structure Of The Eukaryotic Rna Recognition
Motif, Rrm1, From The Heterogeneous Nuclear
Ribonucleoprotein H From Homo Sapiens, Northeast
Structural Genomics Consortium (Nesg) Target Hr8614a
Length = 108
Score = 83.6 bits (205), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 5 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 59
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 60 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDG 108
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 38 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 92
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 93 VLKHT-GPNSP 102
>gi|296199717|ref|XP_002747276.1| PREDICTED: RNA-binding protein 12 isoform 1 [Callithrix jacchus]
Length = 1460
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 53/318 (16%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++ T +
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGM 510
Query: 527 QQVLNKTMELPKNNSLTSSN-----NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCI 581
+ ++ + +N S G + + +H+ +P S T+ D +
Sbjct: 511 LEKIDMIRKRLQNFSYDQREMILNPEGDVSSAKVCAHITNIPF---------SITKMDVL 561
Query: 582 R-LRGLPYE--ALCILMD 596
+ L G+P + A+ +L+D
Sbjct: 562 QFLEGIPVDENAVHVLVD 579
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|166831595|gb|ABY90120.1| RNA binding motif protein 12 (predicted) [Callithrix jacchus]
Length = 1460
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 53/318 (16%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++ T +
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGM 510
Query: 527 QQVLNKTMELPKNNSLTSSN-----NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCI 581
+ ++ + +N S G + + +H+ +P S T+ D +
Sbjct: 511 LEKIDMIRKRLQNFSYDQREMILNPEGDVSSAKVCAHITNIPF---------SITKMDVL 561
Query: 582 R-LRGLPYE--ALCILMD 596
+ L G+P + A+ +L+D
Sbjct: 562 QFLEGIPVDENAVHVLVD 579
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|340722803|ref|XP_003399791.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Bombus terrestris]
gi|350424200|ref|XP_003493719.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Bombus impatiens]
Length = 414
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + +S GR +GEA V E + A KR + H+ RYIEV KA + V
Sbjct: 41 GKNGVHMTMSREGRPSGEAYVEMDTLEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVVK 100
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 101 RSGMNLENAMDDGC---VRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTDYT 150
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIR----------YIELFRSTTAEVQQVLNKT 533
G++TG+A+V F ++ A++AL KHKE IG R YIE+FRS+ +EV+ +
Sbjct: 151 GRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAGFGYIEIFRSSLSEVRASIGPK 210
Query: 534 M 534
M
Sbjct: 211 M 211
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 40/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ T +++ FF + C++ +G+ GV +G+ +G+A+V + E+
Sbjct: 14 VVKLRGLPWSTTVDEIMKFF-----SDCSITNGKNGVHMTMSREGRPSGEAYVEMDTLED 68
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA + ++ +G RYIE+F++ E++ V+ ++ G++ + M
Sbjct: 69 IEKACKRDRDHMGHRYIEVFKAKRGEMEWVVKRS--------------GMNLENAM---- 110
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 111 -----------------DDGCVRLRGLPFGCSKEEIAQFFSG 135
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP++ T + + DFF NV + + G+ +G+A V F EEA
Sbjct: 297 IHMRGLPFKATEQDIADFFRP--IEPVNVR-------IILENGGRPSGEADVEFATHEEA 347
Query: 501 DKALSKHKESIGIRYIELF 519
KA+SK K + RYIELF
Sbjct: 348 VKAMSKDKSHMSHRYIELF 366
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ I++F + + GVHM + +G+PSGEA+++MD+ + + +R+ +
Sbjct: 24 TTVDEIMKFFSDCSITNGKNGVHMTMSREGRPSGEAYVEMDTLED--IEKACKRDRDHM- 80
Query: 120 GKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 81 --GHRYIEVFKAKRGEMEWVV 99
>gi|281182775|ref|NP_001162483.1| RNA-binding protein 12 [Papio anubis]
gi|164623749|gb|ABY64675.1| RNA binding motif protein 12 (predicted) [Papio anubis]
Length = 1466
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|21740240|emb|CAD39131.1| hypothetical protein [Homo sapiens]
Length = 663
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 10 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 69
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 70 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 128
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 129 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 183
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 184 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 233
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 199 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 258
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 259 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 311
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 312 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 358
>gi|348564119|ref|XP_003467853.1| PREDICTED: RNA-binding protein 12-like [Cavia porcellus]
Length = 1467
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V P P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVK--PLPINPDDLYVSVHGMPFSAVENDVRDFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVGPATERQWV-AAGGHITFKQSIGPSGQTHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDTIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSEHLHRKKLNGREAFVHVVTLEDMREI 627
>gi|350594874|ref|XP_003483994.1| PREDICTED: RNA-binding protein 12 isoform 1 [Sus scrofa]
gi|350594876|ref|XP_003483995.1| PREDICTED: RNA-binding protein 12 isoform 2 [Sus scrofa]
gi|350594878|ref|XP_003483996.1| PREDICTED: RNA-binding protein 12 isoform 3 [Sus scrofa]
Length = 933
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V +P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKPLPI--NPDDLYVSVHGMPFSAVENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSIGPSGQTHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVNSAKVCAHITNIPFSVTKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|426391523|ref|XP_004062122.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12 [Gorilla
gorilla gorilla]
Length = 1474
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 287 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 346
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 347 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 405
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 406 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 460
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 461 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 510
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 476 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 535
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 536 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 588
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 589 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 635
>gi|403281161|ref|XP_003932066.1| PREDICTED: RNA-binding protein 12 [Saimiri boliviensis boliviensis]
Length = 1465
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGPAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|351702538|gb|EHB05457.1| RNA-binding protein 12 [Heterocephalus glaber]
Length = 850
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V P P NP L V + S N + + L + V L GR NG
Sbjct: 287 QMNSQSSVK--PLPINPDDLYVSVHGMPFSAAENDVRDFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+E++ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEISPATERQWV-AAGGHITFKQSMGPSGQSHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDTIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMVLNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSEHLHRKKLNGREAFVHVVTLEDMREI 627
>gi|194387896|dbj|BAG61361.1| unnamed protein product [Homo sapiens]
Length = 731
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 78 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 137
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 138 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 196
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 197 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 251
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 252 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 301
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 20/152 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 267 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 326
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 327 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 379
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIR 514
+G+ G A V F+ E++A K+ H++ + R
Sbjct: 380 NGQGLGQALVQFKNEDDARKSERLHRKKLNGR 411
>gi|344279913|ref|XP_003411730.1| PREDICTED: RNA-binding protein 12-like isoform 2 [Loxodonta
africana]
Length = 924
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 53/263 (20%)
Query: 284 PINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPL 343
P+N+N+ L PM F P PV P Q+N +V P NP L
Sbjct: 265 PVNLNSN--LNPM-----FLGPLNPVNPI--------QMNSQNSVK--PLSINPDDLYVS 307
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
V + S + N + + L + V L GR NG +V+F+ + ALKR++ +
Sbjct: 308 VHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLM 367
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG--------------------------- 436
+RY+EV+ A ++ AGG+ Q+ G
Sbjct: 368 IQRYVEVSPATERQWV-AAGGHITFKQSLGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPQ 426
Query: 437 -AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 427 EAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFR 479
Query: 496 KEEEADKALSKHKESIGIRYIEL 518
E + AL +HK+ +G R+I++
Sbjct: 480 NEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|449685013|ref|XP_002164898.2| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Hydra
magnipapillata]
Length = 365
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 14/126 (11%)
Query: 405 KRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
KRYIEV +A + V +N ++ I+R+RGLP++CT + +FF +G +
Sbjct: 3 KRYIEVKEAKQSEMEWVVNRMDNSR-------SEAIVRLRGLPFDCTKHDIAEFF-SGLD 54
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
S G+ DG+A+GDA+V F +++A+ AL KHKE IG RYIE+F+S+
Sbjct: 55 IS------PYGITITMNQDGRASGDAYVEFVTQQDAENALLKHKEKIGHRYIEIFQSSKD 108
Query: 525 EVQQVL 530
+++ V+
Sbjct: 109 DIKYVV 114
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+E + ++ FF N +D V + +P+G+ G+ V F +A
Sbjct: 198 VHMRGLPFEASVSDIVTFFSP-----LNPVD----VRLMFEPNGRPKGECDVDFATHSDA 248
Query: 501 DKALSKHKESIGIRYIELF 519
+ A+ K K+++G RYIELF
Sbjct: 249 ESAMLKDKQNMGHRYIELF 267
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ + ++ GR +G+A V F+ Q+ + AL +HK I RYIE+ +++ +D V G +
Sbjct: 59 GITITMNQDGRASGDAYVEFVTQQDAENALLKHKEKIGHRYIEIFQSSKDDIKYVVGTRS 118
Query: 427 NEAQAFL 433
++ + L
Sbjct: 119 DDHRPSL 125
>gi|344279911|ref|XP_003411729.1| PREDICTED: RNA-binding protein 12-like isoform 1 [Loxodonta
africana]
Length = 936
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 53/263 (20%)
Query: 284 PINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPL 343
P+N+N+ L PM F P PV P Q+N +V + NP L
Sbjct: 265 PVNLNSN--LNPM-----FLGPLNPVNPI--------QMNSQNSVKPLSI--NPDDLYVS 307
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
V + S + N + + L + V L GR NG +V+F+ + ALKR++ +
Sbjct: 308 VHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLM 367
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG--------------------------- 436
+RY+EV+ A ++ AGG+ Q+ G
Sbjct: 368 IQRYVEVSPATERQWV-AAGGHITFKQSLGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPQ 426
Query: 437 -AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 427 EAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFR 479
Query: 496 KEEEADKALSKHKESIGIRYIEL 518
E + AL +HK+ +G R+I++
Sbjct: 480 NEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|297612598|ref|NP_001066073.2| Os12g0131000 [Oryza sativa Japonica Group]
gi|255670013|dbj|BAF29092.2| Os12g0131000 [Oryza sativa Japonica Group]
Length = 292
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 120 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGFFDSE 179
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T + +I FF E +E
Sbjct: 180 YRHSPPPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFF---VEYELT----DEN 232
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
V V +PDGKATG+A+V F E A+ K K +IG RY+ELF ST E + ++ +
Sbjct: 233 VHIVYRPDGKATGEAYVEFPTAEVVKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRVRQ 292
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 87 VRLRGLPFDCDDLDICKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 136
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S H
Sbjct: 137 EFALHRNRQNMGRRYVEVFRCKKQEYYSAI--AAEVNQGGFFDSE----------YRHSP 184
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKV 610
P P P +S + ++LRGLPY A + FFV + D VH V
Sbjct: 185 PPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFFVEYELTDENVHIV 236
>gi|170592721|ref|XP_001901113.1| Heterogeneous nuclear ribonucleoprotein H' [Brugia malayi]
gi|158591180|gb|EDP29793.1| Heterogeneous nuclear ribonucleoprotein H', putative [Brugia
malayi]
Length = 385
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT-----KANGEDFINVA 422
+ L GR +GE V F +E D AL + K +I KRY+E+ +++ +D
Sbjct: 36 IKLTKDRDGRASGEGFVVFSSREDYDFALTKDKKYIGKRYVELQQVSSMESDYDDSDRRY 95
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV-KK 481
GG+ A L I+R+ GLPY CT ++++ FFE + + G++ +
Sbjct: 96 GGSL--ADPNLPARETSIVRLAGLPYGCTKEEIVRFFEP-------LEIADRGIVMTYDR 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
GK G+AFV F +E A KAL+K+KE I RY++++ S+ E+ + L+ ++
Sbjct: 147 YSGKPKGEAFVAFIDDESASKALAKNKEYIQHRYVDIYPSSYGEMLRALDGGLD 200
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++ RGLP+ CT + +FF + + K DG+A+G+ FV+F E+
Sbjct: 7 VMKCRGLPWSCTEDDLREFFGEAARSITQIK-------LTKDRDGRASGEGFVVFSSRED 59
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLS-----AQQP 554
D AL+K K+ IG RY+EL QQV +ME ++S L+ A++
Sbjct: 60 YDFALTKDKKYIGKRYVEL--------QQV--SSMESDYDDSDRRYGGSLADPNLPARET 109
Query: 555 MLSHLAQVPVPYLPQHII 572
+ LA +P + I+
Sbjct: 110 SIVRLAGLPYGCTKEEIV 127
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ IRMRGLPY T + +IDFF+ S + VL+ D + +G+A V F
Sbjct: 309 EYCIRMRGLPYRATERDIIDFFQPLRPASID-------VLYEYGTD-RPSGEAIVEFRNR 360
Query: 498 EEADKALSKHKESIGIRYIEL 518
+ D A+ +++ +G RY+EL
Sbjct: 361 ADFDAAMQRNRNYMGSRYVEL 381
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 367 GVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGG 424
G+ + + G+ GEA V FID E AL ++K +I RY+++ ++ GE + GG
Sbjct: 139 GIVMTYDRYSGKPKGEAFVAFIDDESASKALAKNKEYIQHRYVDIYPSSYGEMLRALDGG 198
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYE 449
+ RG + R RGLPY+
Sbjct: 199 LDPYGGG---RGWERDRRPRGLPYD 220
>gi|169731516|gb|ACA64888.1| RNA binding motif protein 12 (predicted) [Callicebus moloch]
Length = 1465
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQGSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
>gi|222616578|gb|EEE52710.1| hypothetical protein OsJ_35118 [Oryza sativa Japonica Group]
Length = 291
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 119 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGFFDSE 178
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T + +I FF E +E
Sbjct: 179 YRHSPPPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFF---VEYELT----DEN 231
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
V V +PDGKATG+A+V F E A+ K K +IG RY+ELF ST E + ++ +
Sbjct: 232 VHIVYRPDGKATGEAYVEFPTAEVVKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRVRQ 291
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 86 VRLRGLPFDCDDLDICKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 135
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S H
Sbjct: 136 EFALHRNRQNMGRRYVEVFRCKKQEYYSAI--AAEVNQGGFFDSE----------YRHSP 183
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKV 610
P P P +S + ++LRGLPY A + FFV + D VH V
Sbjct: 184 PPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFFVEYELTDENVHIV 235
>gi|395505306|ref|XP_003756983.1| PREDICTED: RNA-binding protein 12 [Sarcophilus harrisii]
Length = 1415
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 50/267 (18%)
Query: 283 LPINMNTAHLLQPMNT---PFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
+P MN + +N+ P F P PV P Q+N ++ P P NP
Sbjct: 255 IPTGMNGSGAALNLNSNLNPMFLG-PLNPVNPI--------QMNSQSSLK--PLPINPDD 303
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH 399
L V + S + + + L + V L GR NG +V+F + ALKR+
Sbjct: 304 LYVSVHGMPFSAMETDVKDFFHGLRVDAVHLLKDHVGRNNGNGLVKFFSPQDTFEALKRN 363
Query: 400 KHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGA-----QVIIR------------ 442
+ + +RY+EV+ A ++ AGG+ Q+ G Q ++R
Sbjct: 364 RMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQTHPPPQTLVRSKSPSGQKRSRS 422
Query: 443 -----------MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
++GLP+E K VIDFF+ +++ E+ + P+GKATG+ F
Sbjct: 423 RSPHEPGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGF 475
Query: 492 VLFEKEEEADKALSKHKESIGIRYIEL 518
V F E + AL +HK+ +G R+I++
Sbjct: 476 VEFRSESDYKAALCRHKQYMGNRFIQV 502
>gi|298713992|emb|CBJ27224.1| heterogeneous nuclear ribonucleoprotein, putative [Ectocarpus
siliculosus]
Length = 525
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IRMRGLPY + +V+ FF+ C++ EEGV FV + DG+ TG+A+V F E
Sbjct: 437 TVIRMRGLPYRASKSEVMCFFKG-----CSIP--EEGVAFVTRADGRVTGEAYVRFATRE 489
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+A L K +E IG RYIELF S+ E+ + N
Sbjct: 490 DAKMGLRKDREMIGSRYIELFTSSPEEMARYANS 523
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
GVA A GR GEA VRF +E M L++ + I RYIE+ ++ E+ A
Sbjct: 466 GVAFVTRADGRVTGEAYVRFATREDAKMGLRKDREMIGSRYIELFTSSPEEMARYA 521
>gi|334311305|ref|XP_001381494.2| PREDICTED: RNA-binding protein 12 [Monodelphis domestica]
Length = 1413
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 50/267 (18%)
Query: 283 LPINMNTAHLLQPMNT---PFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
+P MN + +N+ P F P PV P Q+N ++ P P NP
Sbjct: 255 IPTGMNGSGAALNLNSNLNPMFLG-PLNPVNPI--------QMNSQSSLK--PLPINPDD 303
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH 399
L V + S + + + L + V L GR NG +V+F + ALKR+
Sbjct: 304 LYVSVHGMPFSAMETDVKDFFHGLRVDAVHLLKDHVGRNNGNGLVKFFSPQDTFEALKRN 363
Query: 400 KHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGA-----QVIIR------------ 442
+ + +RY+EV+ A ++ AGG+ Q+ G Q ++R
Sbjct: 364 RMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQTHPPPQTLVRSKSPSGQKRSRS 422
Query: 443 -----------MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
++GLP+E K VIDFF+ +++ E+ + P+GKATG+ F
Sbjct: 423 RSPHEPGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGF 475
Query: 492 VLFEKEEEADKALSKHKESIGIRYIEL 518
V F E + AL +HK+ +G R+I++
Sbjct: 476 VEFRSESDYKAALCRHKQYMGNRFIQV 502
>gi|395830118|ref|XP_003788182.1| PREDICTED: RNA-binding protein 12 [Otolemur garnettii]
Length = 1478
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 74/351 (21%)
Query: 284 PINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPL 343
P+N+N N F P PV P Q+N +V P P NP L
Sbjct: 265 PVNLNN-------NLNHMFLGPLNPVNPI--------QMNSQNSVK--PLPINPDDLYVS 307
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
V + S N + + L + V L GR NG +V+F+ + ALKR++ +
Sbjct: 308 VHGMPFSATENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLM 367
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG--------------------------- 436
+RY+EV+ A ++ AGG+ Q G
Sbjct: 368 IQRYVEVSPATERQWV-AAGGHITFKQNMGPSGQTHPPPQTVPRSKSPSGQKRSRSRSPH 426
Query: 437 -AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 427 EAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFR 479
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS-------LTSSNNG 548
E + AL +HK+ +G R+I++ T + + ++ + +N S L +G
Sbjct: 480 NEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREIILNPEGDG 539
Query: 549 LSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGLPYE--ALCILMD 596
S + + +H+ +P S T+ D ++ L G+P + A+ +L+D
Sbjct: 540 NSGK--ICAHITNIPF---------SITKMDVLQFLEGIPVDENAVHVLVD 579
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 436 GAQVIIRMRG-------------LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
++I+ G +P+ T V+ F E + E V +
Sbjct: 528 QREIILNPEGDGNSGKICAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 SGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHIVTLEDMREI 627
>gi|393908924|gb|EFO28044.2| heterogeneous nuclear ribonucleoprotein H [Loa loa]
Length = 370
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT-----KANGEDFINVA 422
+ L GR +GE V F +E D AL + K +I KRY+E+ +++ +D
Sbjct: 36 IKLTKDRDGRASGEGYVVFSSREDYDFALTKDKKYIGKRYVELQQVSSMESDYDDGDRRY 95
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG A L I+R+ GLPY CT ++++ FFE + V+ +
Sbjct: 96 GGPV--ADPNLPGRETSIVRLGGLPYGCTKEEIVRFFEPLEIADRGI------VMTYDRY 147
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
GK G+AFV F E+ A KAL+K+KE I RY++++ S+ E+ + L+ ++
Sbjct: 148 SGKPKGEAFVAFTDEDSASKALAKNKEYIQHRYVDIYPSSYGEMLRALDGGLD 200
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
I++ RGLP+ CT + +FF + + K DG+A+G+ +V+F
Sbjct: 5 DFIMKCRGLPWSCTEDDLREFFGEAARSITQIK-------LTKDRDGRASGEGYVVFSSR 57
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAE 525
E+ D AL+K K+ IG RY+EL + ++ E
Sbjct: 58 EDYDFALTKDKKYIGKRYVELQQVSSME 85
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ IRMRGLPY T + +IDFF+ S + VL+ D + +G+A V F
Sbjct: 294 EYCIRMRGLPYRATERDIIDFFQPLRPASID-------VLYEYGTD-RPSGEAIVEFRNR 345
Query: 498 EEADKALSKHKESIGIRYIEL 518
+ D A+ +++ +G RY+EL
Sbjct: 346 ADFDAAMQRNRNYMGSRYVEL 366
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 367 GVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGG 424
G+ + + G+ GEA V F D++ AL ++K +I RY+++ ++ GE + GG
Sbjct: 139 GIVMTYDRYSGKPKGEAFVAFTDEDSASKALAKNKEYIQHRYVDIYPSSYGEMLRALDGG 198
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYE 449
+ RG + R RGLPY+
Sbjct: 199 LDPYGSG--GRGWERDRRPRGLPYD 221
>gi|197215644|gb|ACH53036.1| RNA binding motif protein 12, isoform 1 (predicted) [Otolemur
garnettii]
Length = 1475
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 74/351 (21%)
Query: 284 PINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPL 343
P+N+N N F P PV P Q+N +V P P NP L
Sbjct: 265 PVNLNN-------NLNHMFLGPLNPVNPI--------QMNSQNSVK--PLPINPDDLYVS 307
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
V + S N + + L + V L GR NG +V+F+ + ALKR++ +
Sbjct: 308 VHGMPFSATENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLM 367
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG--------------------------- 436
+RY+EV+ A ++ AGG+ Q G
Sbjct: 368 IQRYVEVSPATERQWV-AAGGHITFKQNMGPSGQTHPPPQTVPRSKSPSGQKRSRSRSPH 426
Query: 437 -AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 427 EAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFR 479
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS-------LTSSNNG 548
E + AL +HK+ +G R+I++ T + + ++ + +N S L +G
Sbjct: 480 NEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREIILNPEGDG 539
Query: 549 LSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGLPYE--ALCILMD 596
S + + +H+ +P S T+ D ++ L G+P + A+ +L+D
Sbjct: 540 NSGK--ICAHITNIPF---------SITKMDVLQFLEGIPVDENAVHVLVD 579
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 436 GAQVIIRMRG-------------LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
++I+ G +P+ T V+ F E + E V +
Sbjct: 528 QREIILNPEGDGNSGKICAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 SGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHIVTLEDMREI 627
>gi|307176277|gb|EFN65908.1| Heterogeneous nuclear ribonucleoprotein H2 [Camponotus floridanus]
Length = 417
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 22/183 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + +S GR +GEA V E + A KR + H+ RYIEV KA + V
Sbjct: 41 GKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVVK 100
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 101 RSGLNLENAMDDGC---VRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTDYT 150
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIR------------YIELFRSTTAEVQQVLN 531
G++TG+A+V F ++ A++AL KHKE IG R YIE+FRS+ +EV+ +
Sbjct: 151 GRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTETLYIAGFGYIEIFRSSLSEVRASIG 210
Query: 532 KTM 534
M
Sbjct: 211 PKM 213
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 40/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++MRGLP+ T +++ FF C++ +G+ GV +G+ +G+A+V + E+
Sbjct: 14 VVKMRGLPWSTTVDEIMKFF-----GDCSISNGKNGVHMTMSREGRPSGEAYVEMDTPED 68
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA + ++ +G RYIE+F++ E++ V+ ++ GL+ + M
Sbjct: 69 IEKACKRDRDHMGHRYIEVFKAKRGEMEWVVKRS--------------GLNLENAM---- 110
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 111 -----------------DDGCVRLRGLPFGCSKEEIAQFFSG 135
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ I++F G+ + + GVHM + +G+PSGEA+++MD+ + + +R+ +
Sbjct: 24 TTVDEIMKFFGDCSISNGKNGVHMTMSREGRPSGEAYVEMDTPED--IEKACKRDRDHM- 80
Query: 120 GKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 81 --GHRYIEVFKAKRGEMEWVV 99
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP++ T + + DFF + V + + G+ +G+A V F EEA
Sbjct: 299 IHMRGLPFKATEQDIADFFRPIEPVN---------VRIILENGGRPSGEADVEFATHEEA 349
Query: 501 DKALSKHKESIGIRYIELF 519
KA+ K K + RYIELF
Sbjct: 350 VKAMCKDKSHMSHRYIELF 368
>gi|194383864|dbj|BAG59290.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 406 RYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RYIEV K++ D++ G N+ A +R+RGLP+ CT ++++ FF +G
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E N G+ P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 58 EIVPN------GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 524 AEVQ 527
EV+
Sbjct: 112 EEVR 115
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 214 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 264
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 265 VAAMSKDRANMQHRYIELFLNST 287
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 63 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 113
>gi|20987708|gb|AAH29764.1| Hnrpf protein [Mus musculus]
Length = 338
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 406 RYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RYIEV K++ D++ G N+ A +R+RGLP+ CT ++++ FF +G
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E N G+ P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 58 EIVPN------GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 524 AEVQ 527
EV+
Sbjct: 112 EEVR 115
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 214 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 264
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 265 VAAMSKDRANMQHRYIELFLNST 287
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 63 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 113
>gi|146197828|dbj|BAF57627.1| hnRNP F protein [Dugesia japonica]
Length = 344
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT 411
LN +P + G+ + L+ GR +GEA+V+ ++ + + ++ R+IEV
Sbjct: 19 FLNGLP----IWNESGILITLNDDGRPSGEALVKLDNEIGLNDLRDYNGKYMGTRFIEVF 74
Query: 412 KANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
A +D+ + + +R+RGLPY+ T + + FF +M
Sbjct: 75 PATQKDWFG--------EEMRMKLSDMTYVRLRGLPYDVTKEDIFIFF-------SRLMI 119
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+GV + PD TG+AFV F E+A+ AL +H + I RYIE+++S+ EV + +
Sbjct: 120 SRDGVGLLYGPDDVPTGEAFVQFMTREDANLALQRHNQCIRSRYIEIYKSSLTEVYRAME 179
Query: 532 KTMELPKNNSLTSS 545
K E+ + L S
Sbjct: 180 KQYEINREEILRRS 193
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 420 NVAGGNNN------EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE 473
N GG N+ E Q F + I MRGLPY T K V +FF + G
Sbjct: 243 NPYGGKNSHSSVKVETQNFGEFLGPLSIHMRGLPYTATEKDVHEFFAPLRVAEVKIQLG- 301
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
PDGK TG+A F E +A KA+ K + + RYIELFR ++
Sbjct: 302 --------PDGKNTGEAEADFYSENDAVKAMEKDRCKMSWRYIELFRGSS 343
>gi|20073357|gb|AAH27003.1| Hnrpf protein [Mus musculus]
Length = 338
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 406 RYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RYIEV K++ D++ G N+ A +R+RGLP+ CT ++++ FF +G
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E N G+ P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 58 EIVPN------GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 524 AEVQ 527
EV+
Sbjct: 112 EEVR 115
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 214 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 264
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 265 VAAMSKDRANMQHRYIELFLNST 287
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 63 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 113
>gi|335775266|gb|AEH58514.1| heterogeneous nuclear ribonucleoprotein-like protein [Equus
caballus]
Length = 337
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 406 RYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RYIEV K++ D++ G N+ A +R+RGLP+ CT ++++ FF +G
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADTA-----NDGFVRLRGLPFGCTKEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E N G+ P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 58 EIVPN------GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 524 AEVQ 527
EV+
Sbjct: 112 EEVR 115
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 214 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 264
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 265 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSAQSTYSGLESQ 317
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 63 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 113
>gi|148670393|gb|EDL02340.1| mCG50680 [Mus musculus]
Length = 338
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 406 RYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RYIEV K++ D++ G N+ A +R+RGLP+ CT ++++ FF +G
Sbjct: 4 RYIEVFKSHRTEMDWVLKHSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E N G+ P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 58 EIVPN------GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 524 AEVQ 527
EV+
Sbjct: 112 EEVR 115
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGL Y+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 214 VHMRGLSYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 264
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 265 VAAMSKDRANMQHRYIELFLNST 287
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 63 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 113
>gi|118362902|ref|XP_001014867.1| hypothetical protein TTHERM_00051700 [Tetrahymena thermophila]
gi|89296443|gb|EAR94431.1| hypothetical protein TTHERM_00051700 [Tetrahymena thermophila
SB210]
Length = 967
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN---------- 425
GR +GE ++R DQ D +H ++ KRYIEV A DF+
Sbjct: 394 GRFSGECVIRTKDQNQLDKIKDKHMRNMGKRYIEVFVAEQSDFVRAQDSQIIDDQKVGIS 453
Query: 426 --NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
N++ L + A I+++RGLPY T + + FF+ +S V +G + V K+P
Sbjct: 454 QINSQIDPNLLQSAN-IVKIRGLPYNATDQDIQKFFK----DSQIVQNGIQKVYDGKRP- 507
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+G+AF++F +++A KA+ K KE +G RYIE+F S E
Sbjct: 508 ---SGEAFIIFATKQDAQKAIEKDKEKMGSRYIEIFLSHLKE 546
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ ++ F E ++ + F DG+ +G+ + + + +
Sbjct: 359 LRLRGLPFNAREAEIQQFLGISLE--------QDQITFKHDNDGRFSGECVIRTKDQNQL 410
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
DK KH ++G RYIE+F + ++ + + + + Q+ +S +
Sbjct: 411 DKIKDKHMRNMGKRYIEVFVAEQSDFVRAQDSQI--------------IDDQKVGISQIN 456
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ 603
P L Q + +++RGLPY A + FF Q
Sbjct: 457 SQIDPNLLQSA-------NIVKIRGLPYNATDQDIQKFFKDSQ 492
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G+ +++RG+PY +V DF +D + ++F + K TG+ F+ +
Sbjct: 162 GSHYFLKLRGIPYNAKESEVQDFLGL-------TLDKYQ-MVFKYDKNEKFTGECFIKAK 213
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+++ DK S HK+++ RYIE+F + E Q
Sbjct: 214 DQDQFDKIKSMHKKTMKNRYIEIFVADKIEFVQA 247
>gi|324506224|gb|ADY42662.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 416
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV-TKANGEDFINVAGG-- 424
+ L++ GR +GE V D ALK ++ I+ RYIEV T + GE + V G
Sbjct: 34 ITFTLTSSGRASGECYVELNDNSAVKEALKLDRNEINGRYIEVFTVSEGELAMMVRHGVI 93
Query: 425 -NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ E+++ + ++R+RGLPY + +FF+ G + + V+D E+G
Sbjct: 94 RGSGESESRYA--SNYVVRLRGLPYSANVDDIKEFFK-GLDVADVVIDKEQG-------- 142
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
G+ +G+AFV +E A+ AL + K ++G RY+E+FRS+ E+ + +P
Sbjct: 143 GRPSGEAFVRLASKEHAELALERSKNNMGSRYVEVFRSSGEEMDNSFYTSRGIP 196
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
A + MRGLPY TA + +FF+ N ++ + D + +GD VLF
Sbjct: 269 AAAKVFMRGLPYNVTALDIEEFFKP-----LNCVE----IKLGYNEDRRLSGDGIVLFST 319
Query: 497 EEEADKALSKHKESIGIRYIELFRST 522
EA ALS++K +IG RYIELF T
Sbjct: 320 MAEARDALSRNKNNIGSRYIELFPGT 345
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMN--LVLNGVLPP 146
G+PSGEAF+++ S+ A LA + R NM RY+EVF+ SGE+M+ + +PP
Sbjct: 143 GRPSGEAFVRLASKEHAELALE-RSKNNM----GSRYVEVFRSSGEEMDNSFYTSRGIPP 197
Query: 147 TSPAISPVGKTLLSPGMLPH 166
P P+ LSP P
Sbjct: 198 --PMAGPIPLRGLSPASDPR 215
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 39/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IR+RGLP+ V +F + T S + F G+A+G+ +V
Sbjct: 7 FIRLRGLPFAAKESDVRNFLQGITAKS---------ITFTLTSSGRASGECYVELNDNSA 57
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+AL + I RYIE+F + E+ ++ + ++
Sbjct: 58 VKEALKLDRNEINGRYIEVFTVSEGELAMMV---------------------RHGVIRGS 96
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
+ Y ++ +RLRGLPY A + FF G
Sbjct: 97 GESESRYASNYV---------VRLRGLPYSANVDDIKEFFKG 129
>gi|357143320|ref|XP_003572879.1| PREDICTED: G-rich sequence factor 1-like isoform 2 [Brachypodium
distachyon]
Length = 274
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR +GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 102 GRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAVASEVNQGGFFDSE 161
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T + +I FF E E+
Sbjct: 162 YRHSPPPPRPKKPAEDKSSMDYTEVLKLRGLPYSATIEDIIKFF---VEYELT----EDN 214
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
V + DGKATG+AFV F E A A+ K K +IG RY+ELF ST E + ++
Sbjct: 215 VHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSR 271
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 425 NNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ N A A + G Q +R+RGLP++C +I FF +++D L V K
Sbjct: 51 SGNLAGAGVNSGIQSFPGVRLRGLPFDCEDLDIIKFFVG-----LDIVD----CLLVHK- 100
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
+G+ +G+AFV+F +A+ AL ++++++G RY+E+FR E +++
Sbjct: 101 NGRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQEYY------------SAV 148
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
S N H P P P +S + ++LRGLPY A + FFV
Sbjct: 149 ASEVNQGGFFDSEYRHSPPPPRPKKPAEDKSSMDYTEVLKLRGLPYSATIEDIIKFFV 206
>gi|357143317|ref|XP_003572878.1| PREDICTED: G-rich sequence factor 1-like isoform 1 [Brachypodium
distachyon]
Length = 292
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR +GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 120 GRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAVASEVNQGGFFDSE 179
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T + +I FF E E+
Sbjct: 180 YRHSPPPPRPKKPAEDKSSMDYTEVLKLRGLPYSATIEDIIKFF---VEYELT----EDN 232
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
V + DGKATG+AFV F E A A+ K K +IG RY+ELF ST E + ++
Sbjct: 233 VHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSR 289
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 425 NNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ N A A + G Q +R+RGLP++C +I FF +++D L V K
Sbjct: 69 SGNLAGAGVNSGIQSFPGVRLRGLPFDCEDLDIIKFFVG-----LDIVD----CLLVHK- 118
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
+G+ +G+AFV+F +A+ AL ++++++G RY+E+FR E + E+ +
Sbjct: 119 NGRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAV--ASEVNQGGFF 176
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
S H P P P +S + ++LRGLPY A + FFV
Sbjct: 177 DSE----------YRHSPPPPRPKKPAEDKSSMDYTEVLKLRGLPYSATIEDIIKFFV 224
>gi|238006754|gb|ACR34412.1| unknown [Zea mays]
Length = 251
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 342 PLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFGRRNGEAIVRFIDQEHRDMALKRHK 400
P V+ L N I + +GL V L ++ GR GEA V F + AL R +
Sbjct: 44 PCVRLRGLPFDCNDIDVCKFFVGLDIVDCLLVNKNGRFTGEAFVVFPTAMQAEFALHRDR 103
Query: 401 HHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-----------------TRGAQV---I 440
++ +RY+EV + ++ N+ F +G+ +
Sbjct: 104 QNMGRRYVEVFRCKKHEYYCAIANEVNQGGYFEPEYRRSPPPPRPRKPSEDKGSMEYTEV 163
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RGLPY T + +I FF EE V + DGKATG+AFV F E A
Sbjct: 164 LKLRGLPYSATTEDIIKFF-------LEYELAEENVHIAYRSDGKATGEAFVEFPTAEVA 216
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
A+ K K +IG RY+ELF ST E + ++
Sbjct: 217 KTAMCKDKMTIGTRYVELFPSTPEEASRAKSR 248
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 425 NNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
N+N A A + G Q +R+RGLP++C V FF +++D L V K
Sbjct: 28 NSNLAGAGSSTGIQSFPCVRLRGLPFDCNDIDVCKFFVG-----LDIVD----CLLVNK- 77
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+G+ TG+AFV+F +A+ AL + ++++G RY+E+FR E
Sbjct: 78 NGRFTGEAFVVFPTAMQAEFALHRDRQNMGRRYVEVFRCKKHE 120
>gi|157883792|pdb|2HGM|A Chain A, Nmr Structure Of The Second Qrrm Domain Of Human Hnrnp F
gi|297787487|pdb|2KG0|A Chain A, Structure Of The Second Qrrm Domain Of Hnrnp F In Complex
With A Agggau G-Tract Rna
Length = 126
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ CT ++++ FF +G E N G+ P+GK TG+AFV F +E A
Sbjct: 45 VRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVDPEGKITGEAFVQFASQELA 97
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 98 EKALGKHKERIGHRYIEVFKSSQEEVR 124
Score = 43.5 bits (101), Expect = 0.30, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G+ L + G+ GEA V+F QE + AL +HK I RYIEV K++ E+
Sbjct: 72 GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 122
>gi|47222987|emb|CAF99143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 42/263 (15%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINVAGG 424
G+ + GR +GEA V ++ +A+K+ + + RY+EV K+N D++ G
Sbjct: 37 GIHFTYTREGRPSGEAFVEMETEDDLKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHTG 96
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N A +IR+RGLP+ C+ ++++ FF +G E N G+ G
Sbjct: 97 PNCPGTA-----GDGLIRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDIQG 144
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRY--------------IELFRSTTAEVQ--- 527
++TG+AFV F ++ A+KAL KHKE IG R+ + LF+S+ AEV+
Sbjct: 145 RSTGEAFVQFASQDIAEKALKKHKERIGHRWGCVLTAACVCSHGTLRLFKSSRAEVRTHY 204
Query: 528 --QVLNKTMELPKNNSLTSSNNGLS---------AQQPMLSHLAQVPVPYLPQHIITSGT 576
Q M+ P S G + + M Y T
Sbjct: 205 EPQRKPMGMQRPGPYDRPSGGRGYNMMGRGGGGGSYDRMRRGGYGGDGRYGDGGSSFQST 264
Query: 577 RKDCIRLRGLPYEALCILMDIFF 599
C+ +RGLPY A + FF
Sbjct: 265 TGHCVHMRGLPYRATETDIYNFF 287
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ +V FF + C +++ G+ F +G+ +G+AFV E E++
Sbjct: 7 VVRIRGLPWSCSVDEVQRFF-----SGCKILNNGSGIHFTYTREGRPSGEAFVEMETEDD 61
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
A+ K +E++G RY+E+F+S E+ V+ T
Sbjct: 62 LKVAVKKDRETMGHRYVEVFKSNNVEMDWVMKHT 95
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+
Sbjct: 268 CVHMRGLPYRATETDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHED 318
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RY+ELF ++TA
Sbjct: 319 AVAAMSKDKANMQHRYVELFLNSTA 343
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+H Y +G+PSGEAF++M++E L ++ +R + RY+EVF+ + +M+ V
Sbjct: 37 GIHFTYTREGRPSGEAFVEMETEDD--LKVAVKKDRETM---GHRYVEVFKSNNVEMDWV 91
Query: 140 LNGVLP 145
+ P
Sbjct: 92 MKHTGP 97
>gi|391341907|ref|XP_003745268.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Metaseiulus occidentalis]
Length = 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 348 WLSL---LLNTIPGYEQVL-GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
W S +LN + VL G G+ + GR +GEA V + + ALK+ ++
Sbjct: 17 WSSTNDDVLNFLGSDVHVLNGKDGIHFTYTRDGRASGEAYVELESEPDVENALKKDNENM 76
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RYIEV +A + + L G I+R+RG+P+ C+ +++ +FF +G
Sbjct: 77 GNRYIEVFRAKRAEMEWCM---KKSSSNTLDEG---IVRLRGIPFGCSKEEIANFF-SGL 129
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
E N G++ +G+ GDA+V F +E A+KAL KHKE IG RYIE+F+
Sbjct: 130 EIVPN------GIVIPVDFNGRTAGDAYVQFASKEAAEKALEKHKERIGHRYIEIFK 180
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
A I+R+RG+P+ T V++F + +V++G++G+ F DG+A+G+A+V E
Sbjct: 6 ADTIVRLRGMPWSSTNDDVLNFLGS----DVHVLNGKDGIHFTYTRDGRASGEAYVELES 61
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E + + AL K E++G RYIE+FR+ AE++ + K+
Sbjct: 62 EPDVENALKKDNENMGNRYIEVFRAKRAEMEWCMKKS 98
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 413 ANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
+ G D G ++ G + MRG+PY+ T V DFF S
Sbjct: 242 STGYDDYGYGGRRAGKSSGASYSGQGHFVHMRGIPYKATDSDVYDFFAPLRPVS------ 295
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
V F+ + G+ +G+ V F +A A++K+ +G RY+ELF
Sbjct: 296 ---VQFIYEAGGRPSGECDVEFSSHRDAQDAMAKNNAHMGTRYVELF 339
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY+ V FF+ S V F G+ +G+ V F +
Sbjct: 403 FVHMRGLPYKACEDDVFQFFDPIRPAS---------VRFTFDATGRPSGECDVEFASHRD 453
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
A +A+ ++ +G RY+ELF ++A+ + N
Sbjct: 454 AAEAMERNNAHMGNRYVELFMKSSAQNKAFGN 485
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 63 EHILEFLGEFASNI----VYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +L FLG S++ G+H Y G+ SGEA+++++SE A + + N NM
Sbjct: 22 DDVLNFLG---SDVHVLNGKDGIHFTYTRDGRASGEAYVELESEPDVENALK-KDNENM- 76
Query: 119 FGKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M +
Sbjct: 77 ---GNRYIEVFRAKRAEMEWCM 95
>gi|226500358|ref|NP_001148837.1| LOC100282455 [Zea mays]
gi|195622512|gb|ACG33086.1| RNA binding protein [Zea mays]
gi|238009718|gb|ACR35894.1| unknown [Zea mays]
Length = 303
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 342 PLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFGRRNGEAIVRFIDQEHRDMALKRHK 400
P V+ L N I + +GL V L ++ GR GEA V F + AL R +
Sbjct: 96 PCVRLRGLPFDCNDIDVCKFFVGLDIVDCLLVNKNGRFTGEAFVVFPTAMQAEFALHRDR 155
Query: 401 HHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-----------------TRGAQV---I 440
++ +RY+EV + ++ N+ F +G+ +
Sbjct: 156 QNMGRRYVEVFRCKKHEYYCAIANEVNQGGYFEPEYRRSPPPPRPRKPSEDKGSMEYTEV 215
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RGLPY T + +I FF EE V + DGKATG+AFV F E A
Sbjct: 216 LKLRGLPYSATTEDIIKFF-------LEYELAEENVHIAYRSDGKATGEAFVEFPTAEVA 268
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
A+ K K +IG RY+ELF ST E + ++
Sbjct: 269 KTAMCKDKMTIGTRYVELFPSTPEEASRAKSR 300
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 425 NNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
N+N A A + G Q +R+RGLP++C V FF +++D L V K
Sbjct: 80 NSNLAGAGSSTGIQSFPCVRLRGLPFDCNDIDVCKFFVG-----LDIVD----CLLVNK- 129
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+G+ TG+AFV+F +A+ AL + ++++G RY+E+FR E
Sbjct: 130 NGRFTGEAFVVFPTAMQAEFALHRDRQNMGRRYVEVFRCKKHE 172
>gi|56753603|gb|AAW25004.1| SJCHGC02919 protein [Schistosoma japonicum]
gi|226487876|emb|CAX75603.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 137
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 41/150 (27%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ A +I+FF+ C + G+ G+ F + P+G++ G+AF+ + +++
Sbjct: 4 VVRIRGLPFSANADDIINFFK-----DCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDD 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA++ H E +G RYIE+F S + E+ NN++ S +P S
Sbjct: 59 KEKAMAHHNEHMGRRYIEVFDSCSEEL------------NNAMGS--------RPFSS-- 96
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
P +H+ +RLRGLPY+
Sbjct: 97 -----PNRREHV---------VRLRGLPYD 112
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR NGEA + ++ ++ A+ H H+ +RYIEV + E+ N G ++ F +
Sbjct: 43 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSEELNNAMG-----SRPFSSP 97
Query: 436 G-AQVIIRMRGLPYECTAKQVIDFF 459
+ ++R+RGLPY+ K++ FF
Sbjct: 98 NRREHVVRLRGLPYDTEKKEIYAFF 122
Score = 42.4 bits (98), Expect = 0.80, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G++ G+ +GEAFI++DS+ A HN +M +RYIEVF E++N
Sbjct: 33 RGIYFPQGPNGRSNGEAFIELDSKDDKE-KAMAHHNEHM----GRRYIEVFDSCSEELNN 87
Query: 139 VLNGVLPPTSP 149
+ G P +SP
Sbjct: 88 AM-GSRPFSSP 97
>gi|194376648|dbj|BAG57470.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
AL K +E++G RY+E+F+S + E+ +
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWM 96
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 246 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 296
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 297 VAAMAKDKANMQHRYVELFLNSTA 320
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLV 139
RY+EVF+ + +M+ +
Sbjct: 79 GHRYVEVFKSNSVEMDWM 96
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 104 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 142
>gi|147907062|ref|NP_001079993.1| RNA binding motif protein 12 [Xenopus laevis]
gi|37589430|gb|AAH59291.1| Rbm12-prov protein [Xenopus laevis]
Length = 877
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + G+ + GR NG A+V+ I ALKR++ + +R+IEV+ A +I V
Sbjct: 327 LRIDGIVILTDPMGRHNGSALVKLITPHDTFEALKRNRMLMGQRFIEVSPATERQWI-VN 385
Query: 423 GGNNNEAQAFLTRG-----AQVIIR-----------------------MRGLPYECTAKQ 454
GG+ + Q G Q+I R ++GLPYE K
Sbjct: 386 GGHMLKQQNVGHHGPPPLMQQLITRSKSPNPQSRPRSRSPHEHGFCVYLKGLPYEAENKH 445
Query: 455 VIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIR 514
VIDFF+ N++ E+ + +GKATG+ F+ F EE+ AL +HK+ +G R
Sbjct: 446 VIDFFK-----KLNIV--EDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 498
Query: 515 YIEL 518
++++
Sbjct: 499 FVQV 502
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----TKANGE--DFINV 421
+ + + G+ GE + F ++E AL RHK ++ R+++V KA E D I+
Sbjct: 460 IYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNRFVQVHPITKKAMLEKIDMIHK 519
Query: 422 AGGNNNEAQ--------AFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE 473
+ N + F G ++ + LPY K + FF S E
Sbjct: 520 KMQSYNYGEHKDAPLDAEFDKHGPRLWGHLSNLPYSIMRKDISHFFI-----SEGFAIDE 574
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
V + +G+ G A V F E++A K+ H++ + R + L
Sbjct: 575 NFVQLLTDNNGQCIGQALVQFRSEDDARKSERLHRKKLNGRDVFL 619
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+G++ + P G+ G A V + +AL +++ +G R+IE+ S E Q ++N
Sbjct: 330 DGIVILTDPMGRHNGSALVKLITPHDTFEALKRNRMLMGQRFIEV--SPATERQWIVNG- 386
Query: 534 MELPKNNSLTSSNNGLSAQQPMLSHL---AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ L N G P++ L ++ P P + C+ L+GLPYEA
Sbjct: 387 -----GHMLKQQNVGHHGPPPLMQQLITRSKSPNPQSRPRSRSPHEHGFCVYLKGLPYEA 441
>gi|148667169|gb|EDK99585.1| mCG133010, isoform CRA_b [Mus musculus]
Length = 149
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
G N+ A +R+RGLP+ CT ++++ FF
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFFSG 133
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTS 148
RYIEVF+ +M+ VL P ++
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSA 105
>gi|74095965|ref|NP_001027829.1| swan [Takifugu rubripes]
gi|31324616|gb|AAP48570.1| swan [Takifugu rubripes]
Length = 889
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 343 LVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHH 402
L+QN+ + + G+ + LG+ V A GR G+A+V+F + A+KR
Sbjct: 302 LLQNLPFTCTEVDVRGFFRGLGVDAVRFLKDAQGRHTGKAMVKFFSPQESFEAVKRGGGM 361
Query: 403 IDKRYIEVTKANGEDFINVAGG---------------------NNNEAQAFLTRGA---- 437
+ +R+IE+ + + + ++ G NN+ +A RG
Sbjct: 362 MGQRFIEINPGSEQQWASINNGTASQASHSGNKSNIELQQHCRNNSGVEARDQRGRSRSP 421
Query: 438 ---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
+ I ++GLPYE KQ+ +FF N+ E+ + P+G+ATG+ F+ F
Sbjct: 422 HRQEFCIYLKGLPYEADKKQIKEFFN-------NLAIIEDSIYIAYGPNGRATGEGFLEF 474
Query: 495 EKEEEADKALSKHKESIGIRYIEL 518
+ E++ AL H + +G R+I++
Sbjct: 475 KTEQDHKAALGAHMQYMGSRFIQV 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 31/171 (18%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++ + ++ LP+ CT V FF G + V F+K G+ TG A V F
Sbjct: 298 ELFVLLQNLPFTCTEVDVRGFFRG---------LGVDAVRFLKDAQGRHTGKAMVKFFSP 348
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTS---------SNNG 548
+E+ +A+ + +G R+IE+ + + + N T ++ S +N+G
Sbjct: 349 QESFEAVKRGGGMMGQRFIEINPGSEQQWASINNGTASQASHSGNKSNIELQQHCRNNSG 408
Query: 549 LSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
+ A+ + P+ ++ CI L+GLPYEA + FF
Sbjct: 409 VEARD----QRGRSRSPH---------RQEFCIYLKGLPYEADKKQIKEFF 446
>gi|357613158|gb|EHJ68351.1| putative Heterogeneous nuclear ribonucleoprotein H [Danaus
plexippus]
Length = 343
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---INVAG 423
GV L GR +GE V Q+ ALK+ K +I +RYIEV + +D +N
Sbjct: 40 GVHLTEVRPGRPSGECFVEVQSQDDVTHALKKDKENIGRRYIEVFSTDRQDMEWALNAMR 99
Query: 424 GNNNEAQAFLTRGAQV-IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ N I+++RGLP+ C+ +++I FF N +V+ ++GV +
Sbjct: 100 QSENGFDVIPNVSDDFGIVKLRGLPFGCSKEEIIQFF-----NGLSVV--QDGVHLLSDH 152
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+A+G+AFV F ++ A AL + E IG RYIE+F S+ +V+
Sbjct: 153 TGRASGEAFVYFVDKQSARDALDRDMEKIGHRYIEVFLSSADKVR 197
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II++RGLP+ TA+ V+ F + NV++ +EGV + G+ +G+ FV + +++
Sbjct: 10 IIKLRGLPFSTTAEDVLTFL-----SGVNVINDKEGVHLTEVRPGRPSGECFVEVQSQDD 64
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
AL K KE+IG RYIE+F + +++ LN
Sbjct: 65 VTHALKKDKENIGRRYIEVFSTDRQDMEWALN 96
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 48/196 (24%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF----INVA 422
GV L GR +GEA V F+D++ AL R I RYIEV ++ + +
Sbjct: 145 GVHLLSDHTGRASGEAFVYFVDKQSARDALDRDMEKIGHRYIEVFLSSADKVRAYGARLE 204
Query: 423 GGN-------------------------------NNEAQAFLTRGAQV----IIRMRGLP 447
GG ++ RG ++ + MRGLP
Sbjct: 205 GGGFKSRGYRPTPYDRNDRLSGRFGGRGRGSFARGGSGGSYTGRGGRLGSSHCVHMRGLP 264
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH 507
++ T + + FF+ + N+ G+ +G+A V FE E+A +A+ +
Sbjct: 265 FKATPQDIAYFFKPIRPLNINIH---------YDNSGRPSGEADVEFECHEDAMRAMRRD 315
Query: 508 KESIGIRYIELFRSTT 523
K ++ RYIELF +++
Sbjct: 316 KNNMEHRYIELFMNSS 331
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 62 VEHILEFLGEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
E +L FL N++ +GVH+ G+PSGE F+++ S+ A L+ ++ I
Sbjct: 22 AEDVLTFLS--GVNVINDKEGVHLTEVRPGRPSGECFVEVQSQDDVTHA--LKKDKENI- 76
Query: 120 GKKQRYIEVFQCSGEDMNLVLNGV 143
+RYIEVF +DM LN +
Sbjct: 77 --GRRYIEVFSTDRQDMEWALNAM 98
>gi|312081197|ref|XP_003142925.1| RNA binding protein [Loa loa]
gi|307761913|gb|EFO21147.1| RNA binding protein [Loa loa]
Length = 547
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYI 408
S + + + + L + V L++ GR +GE V +D+ + A + K ++ RYI
Sbjct: 70 FSAKEDDVRAFLEGLEVRSVTFTLTSMGRASGECYVELVDKAAAEEAKRFDKQEMNNRYI 129
Query: 409 EVTKANGEDFINVAGGNNNEAQAFLTRGAQ-----VIIRMRGLPYECTAKQVIDFFEAGT 463
EV + + + N + +G Q ++R+RG+P+ T V +FF G
Sbjct: 130 EVFNVTESEVVWMTRHN------VIRKGDQDTPYNFVVRLRGIPFSATNDDVKEFF-TGL 182
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E + V+D E G G+ +G+AFV F ++ A+ AL +++ ++G RY+E+FRS+
Sbjct: 183 EVADVVIDKELG--------GRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEVFRSSG 234
Query: 524 AEVQQ 528
E+++
Sbjct: 235 DELEK 239
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY A + DFF+ N ++ + G ++P +GDA V+F EA
Sbjct: 332 VYMRGLPYSANALDIEDFFKP-----LNCVEIQLGFNEDRRP----SGDACVIFGTLAEA 382
Query: 501 DKALSKHKESIGIRYIELFRSTTAEV 526
A+S++K+ IG RYIELF T A+V
Sbjct: 383 RDAMSRNKQCIGNRYIELF--TAADV 406
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNG-VLPPT 147
G+PSGEAF++ S+ A +A L NRN + RY+EVF+ SG+++ G + PPT
Sbjct: 195 GRPSGEAFVRFASKQHAEMA--LERNRNNM---GSRYVEVFRSSGDELEKSKEGHIAPPT 249
Query: 148 S 148
S
Sbjct: 250 S 250
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 42/161 (26%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLP+ V F E S V F G+A+G+ +V + A
Sbjct: 63 IRLRGLPFSAKEDDVRAFLEGLEVRS---------VTFTLTSMGRASGECYVELVDKAAA 113
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
++A K+ + RYIE+F T +EV + + ++N + +
Sbjct: 114 EEAKRFDKQEMNNRYIEVFNVTESEV-------VWMTRHNVIRKGDQ------------- 153
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P ++ +RLRG+P+ A + FF G
Sbjct: 154 DTPYNFV-------------VRLRGIPFSATNDDVKEFFTG 181
>gi|133778690|gb|AAI34219.1| Rbm35a protein [Danio rerio]
Length = 237
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 24/114 (21%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
GVHMV N QG+PSGEAFIQM S A+LAAQ H R+M K+RY+EVF CS +++N+
Sbjct: 3 HGVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSM----KERYVEVFACSAQEVNI 58
Query: 139 VLNG-------------------VLPPTSPAISPVGKTLLSPGMLPHSSQPLYP 173
VL G P +P + P G L + +LP S +YP
Sbjct: 59 VLMGGTLNRSGLSPPPCLSPPSYTFPHGAPVL-PAGAVLPAGAVLPVESAGIYP 111
>gi|226487872|emb|CAX75601.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 153
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 41/150 (27%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ A +I+FF+ C + G+ G+ F + P+G++ G+AF+ + +++
Sbjct: 4 VVRIRGLPFSANADDIINFFK-----DCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDD 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA++ H E +G RYIE+F S + E+ NN++ S +P S
Sbjct: 59 KEKAMAHHNEHMGRRYIEVFDSCSEEL------------NNAMGS--------RPFSS-- 96
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
P +H+ +RLRGLPY+
Sbjct: 97 -----PNRREHV---------VRLRGLPYD 112
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR NGEA + ++ ++ A+ H H+ +RYIEV + E+ N G ++ F +
Sbjct: 43 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSEELNNAMG-----SRPFSSP 97
Query: 436 G-AQVIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVL 477
+ ++R+RGLPY+ K++ FF+ + V+ G G L
Sbjct: 98 NRREHVVRLRGLPYDTEKKEIYAFFQRPGNSSQRYRVIGGSYGSL 142
Score = 42.0 bits (97), Expect = 1.00, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G++ G+ +GEAFI++DS+ A HN +M +RYIEVF E++N
Sbjct: 33 RGIYFPQGPNGRSNGEAFIELDSKDDKE-KAMAHHNEHM----GRRYIEVFDSCSEELNN 87
Query: 139 VLNGVLPPTSP 149
+ G P +SP
Sbjct: 88 AM-GSRPFSSP 97
>gi|449499514|ref|XP_002192774.2| PREDICTED: G-rich sequence factor 1 [Taeniopygia guttata]
Length = 402
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ GRR G+A++ + AL++H ++ RY++V + + D +
Sbjct: 106 GENGIHFLLNRDGRRRGDALIELESKADVQRALEKHLRYMGPRYVKVFEVHDSDVEGLLQ 165
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+E+QA + ++ +RGLP+ T + + DFF + + D + F+ + D
Sbjct: 166 SLRDESQAM----SDGVVLLRGLPFTSTEEDIADFF-----SGLKITD----IAFIYRGD 212
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+ TG+AFV F E A KAL +H+E +G RYIE++ S ++Q+
Sbjct: 213 -RRTGEAFVQFATPEMAAKALLRHREYMGSRYIEVYVSRKHQMQR 256
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R +G P+ CT + V+ FF +SC + +GE G+ F+ DG+ GDA + E + +
Sbjct: 79 LVRAQGFPFSCTEEDVLTFF-----DSCRIRNGENGIHFLLNRDGRRRGDALIELESKAD 133
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+AL KH +G RY+++F ++V+ +L
Sbjct: 134 VQRALEKHLRYMGPRYVKVFEVHDSDVEGLL 164
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 76/189 (40%), Gaps = 56/189 (29%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---------------------TKANG 415
RR GEA V+F E AL RH+ ++ RYIEV ++A
Sbjct: 213 RRTGEAFVQFATPEMAAKALLRHREYMGSRYIEVYVSRKHQMQRHMPYSKQLTAYSRARR 272
Query: 416 EDFINVA--------GGNNNEAQAFLTRGA-----------------QVIIRMRGLPYEC 450
E + +++ GG++ E + L+R Q + MRG P +
Sbjct: 273 E-YESISEDRGWRDTGGSHAEGEINLSRERTESSRNVLESENTSSPPQHFVHMRGFPSQA 331
Query: 451 TAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKES 510
+A+ +I+FF +L G ATG+A V FE E+A A++K
Sbjct: 332 SAQDIINFFAPLRPTR---------ILVEYNSGGDATGEADVHFESHEDAVAAMAKDGSQ 382
Query: 511 IGIRYIELF 519
+ IELF
Sbjct: 383 MECSAIELF 391
>gi|340380887|ref|XP_003388953.1| PREDICTED: RNA-binding protein 12B-like [Amphimedon queenslandica]
Length = 746
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 337 PVALCPLVQNIWLSL-----------LLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVR 385
P PLV++ ++ L +L+ + + G GV + GR +GEA V
Sbjct: 124 PTEPRPLVESYFVRLRGLPYSAMASDILDFLKDVQVKDGEKGVHFSFGSDGRVSGEAYVE 183
Query: 386 FIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRG 445
+ AL+ + H+ RYIEV +A+ F + + A ++R+RG
Sbjct: 184 VCSGGDVERALRHDRDHLGGRYIEVFRASQNQFEYEC---HPMKGPGVGGRAGGVVRLRG 240
Query: 446 LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALS 505
LPY T + DFF+ G S M E G+ TG+AFV EE+ D+AL
Sbjct: 241 LPYGSTEDNIRDFFQ-GIAISHITMQLNE--------SGRETGEAFVELFHEEDVDRALD 291
Query: 506 KHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
+HK+ +G RYIE+FR+T ++++ V ++ + +
Sbjct: 292 RHKKVLGHRYIEVFRTTRSDIKPVADRWAKYSR 324
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+RMRGLPY + +++ DFF V K G+A+G+ V F E+
Sbjct: 585 CVRMRGLPYSASEREIFDFFSPLVPFR---------VTLEKDTYGRASGEGEVEFCTHED 635
Query: 500 ADKALSKHKESIGIRYIELF 519
A A+ K + IG RY+ELF
Sbjct: 636 AVNAMKKDRGHIGSRYVELF 655
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
+ IL+FL + +GVH + S G+ SGEA++++ S + LRH+R+ +
Sbjct: 145 AMASDILDFLKDVQVKDGEKGVHFSFGSDGRVSGEAYVEVCS--GGDVERALRHDRDHLG 202
Query: 120 GKKQRYIEVFQCS 132
G RYIEVF+ S
Sbjct: 203 G---RYIEVFRAS 212
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 33/123 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+RMRGLPY + +++ DFF V K G+A+G+ V F E+
Sbjct: 398 CVRMRGLPYSASEREIFDFFSPLVPFR---------VTLEKDTYGRASGEGEVEFCTHED 448
Query: 500 ADKALSK-----------HKESIGI-------------RYIELFRSTTAEVQQVLNKTME 535
A A+ K H+ + I +YIE+FR+T ++++ V ++ +
Sbjct: 449 AVNAMKKDRGHIVCDEVLHRAQLEINVGDGFLFHHHVCKYIEVFRTTRSDIKPVADRWAK 508
Query: 536 LPK 538
+
Sbjct: 509 YSR 511
>gi|238013930|gb|ACR38000.1| unknown [Zea mays]
gi|413946698|gb|AFW79347.1| RNA binding protein [Zea mays]
Length = 295
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT- 434
GR GEA V F + AL R++ ++ +RY+EV + +++ + ++ F +
Sbjct: 122 GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKQEYYSAIANEVSQGGYFESE 181
Query: 435 -----------------RGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+G+ ++++RGLPY T + +I FF EE
Sbjct: 182 CRRSSPPPRPPKKTAEDKGSMEYTEVLKLRGLPYSATTEDIIKFF-------LEYELTEE 234
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
V + DGKATG+AFV F E A A+ K K +IG RY+ELF ST E + +
Sbjct: 235 NVHIAIRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRARTR 292
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +
Sbjct: 89 VRLRGLPFDCNDIDICKFFVG-----LDIVD----CLLVNK-NGRFTGEAFVVFPTAMQT 138
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S S A
Sbjct: 139 EFALHRNRQNMGRRYVEVFRCKKQEYYSAIAN--EVSQGGYFESECRRSSPPPRPPKKTA 196
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
+ S + ++LRGLPY A + FF+
Sbjct: 197 EDK---------GSMEYTEVLKLRGLPYSATTEDIIKFFL 227
>gi|47218706|emb|CAG05678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 488
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 19/123 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP-------DGKATGDAF 491
+R+RGLP+ C+ ++++ FF S ++ EG+ V G++TG+AF
Sbjct: 19 CTLRLRGLPFGCSKEEIVQFFSVSIPTSVSMCAWVEGLRIVPNGITLPVDYQGRSTGEAF 78
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
V F +E A+KAL KHKE IG RYIE+F+S+ E++ ELP+ G+
Sbjct: 79 VQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEIRAYY----ELPR--------RGMGG 126
Query: 552 QQP 554
Q+P
Sbjct: 127 QRP 129
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 17/85 (20%)
Query: 330 TIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQ 389
+IPT V++C V+ L +P G+ L + GR GEA V+F +
Sbjct: 42 SIPTS---VSMCAWVEG------LRIVPN--------GITLPVDYQGRSTGEAFVQFASK 84
Query: 390 EHRDMALKRHKHHIDKRYIEVTKAN 414
E + AL +HK I RYIE+ K++
Sbjct: 85 EIAEKALGKHKERIGHRYIEIFKSS 109
>gi|307110461|gb|EFN58697.1| hypothetical protein CHLNCDRAFT_20050, partial [Chlorella
variabilis]
Length = 81
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ TA+ V+ FFE G E + GE GV+F PDG+ TG+A+V E
Sbjct: 1 VRLRGLPFTSTAQDVLQFFE-GVET----VGGEAGVVFTCTPDGRPTGEAYVALPDAEAL 55
Query: 501 DKALSKHKESIGIRYIELFRSTTAEV 526
A+++HK+ IG RYIE+F S+ ++
Sbjct: 56 AGAVARHKDKIGTRYIEIFESSKGDM 81
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT 411
+L G E V G GV + GR GEA V D E A+ RHK I RYIE+
Sbjct: 15 VLQFFEGVETVGGEAGVVFTCTPDGRPTGEAYVALPDAEALAGAVARHKDKIGTRYIEIF 74
Query: 412 KANGED 417
+++ D
Sbjct: 75 ESSKGD 80
>gi|301606650|ref|XP_002932936.1| PREDICTED: RNA-binding protein 12 [Xenopus (Silurana) tropicalis]
Length = 880
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 34/183 (18%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + G+ + GR NG A+V+ I ALKR++ + +R+IEV+ A ++ A
Sbjct: 330 LRIDGIVVLKDPMGRHNGSALVKLITPHDTFEALKRNRMLLGQRFIEVSPATERQWMVSA 389
Query: 423 G-----------GNNNEAQAFLTRGAQ----------------VIIRMRGLPYECTAKQV 455
G G Q +TR + ++GLPYE K V
Sbjct: 390 GHILKPQNVGHHGPPPLMQQLITRSKSPSTQSRPRSRSPHEHGFCVYLKGLPYEAENKHV 449
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRY 515
IDFF+ +++ E+ + +GKATG+ F+ F EE+ AL +HK+ +G R+
Sbjct: 450 IDFFK-----KLDIV--EDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNRF 502
Query: 516 IEL 518
+++
Sbjct: 503 VQV 505
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+ GLP + + DFF + +G++ +K P G+ G A V + +
Sbjct: 311 LHGLPVPVSEADIKDFFHG-----LRI----DGIVVLKDPMGRHNGSALVKLITPHDTFE 361
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL--- 559
AL +++ +G R+IE+ S E Q +++ + L N G P++ L
Sbjct: 362 ALKRNRMLLGQRFIEV--SPATERQWMVS------AGHILKPQNVGHHGPPPLMQQLITR 413
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
++ P + C+ L+GLPYEA
Sbjct: 414 SKSPSTQSRPRSRSPHEHGFCVYLKGLPYEA 444
>gi|410041428|ref|XP_003950996.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H2-like [Pan troglodytes]
Length = 442
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V + +A K + + RY+EV K+N D+++
Sbjct: 37 GTSGICFIYTGEGRPSGEAFVELESADEAKLAXK-DRETMGHRYVEVFKSNSVEMDWVSK 95
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A + +RGLP+ C ++++ FF +G E N G+
Sbjct: 96 HTGLNSPDTA-----NDGFVWLRGLPFGCXKEEIVHFF-SGLEIVPN------GITLXVD 143
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
G++TG+AFV +E A+ AL KH+E IG RYIE+F ++ AEV + + +L
Sbjct: 144 FQGRSTGEAFVQLASQEIAEMALKKHRERIGHRYIEIFXNSQAEVHTYYDPSQKL 198
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++++GL + C+A +V+ F + C + +G G+ F+ +G+ +G+AFV E +E
Sbjct: 11 VVKVQGLSWSCSADEVMHF------SDCKIQNGTSGICFIYTGEGRPSGEAFVELESADE 64
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
A K K +E++G RY+E+F+S + E+ V T NS ++N+G
Sbjct: 65 A-KLAXKDRETMGHRYVEVFKSNSVEMDWVSKHT----GLNSPDTANDGF 109
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF++++S A LA + R RY+EVF+ + +M+ V
Sbjct: 40 GICFIYTGEGRPSGEAFVELESADEAKLAXKDRETMG------HRYVEVFKSNSVEMDWV 93
>gi|449486103|ref|XP_004175453.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12 [Taeniopygia
guttata]
Length = 1411
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 131/317 (41%), Gaps = 55/317 (17%)
Query: 283 LPINMNTAHLLQPMNT---PFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
LP MN + MN+ P F P PV P Q+N +V IP NP
Sbjct: 255 LPTGMNGSGAAVNMNSGLNPLFIG-PMNPVNPI--------QMNSQGSVKPIPI--NPDD 303
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH 399
L V + + + + + L + V + GR NG +V+F + ALKR+
Sbjct: 304 LYVSVHGMPFTATESDVKDFFLGLRVDAVHMLKDHVGRNNGNGLVKFFSPQDTFEALKRN 363
Query: 400 KHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQ--------------------- 438
+ + +RY+EV+ A ++ AGG+ Q G
Sbjct: 364 RMLMIQRYVEVSPATERQWV-AAGGHITFKQTMGPSGQAHPPSQAHPRSKSPTGQKRSRS 422
Query: 439 -------VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
+ ++GLP+E K VIDFF+ +++ E+ + P+GKA G+ F
Sbjct: 423 RSPHEHGFCVYLKGLPFESENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKAIGEGF 475
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS-----LTSSN 546
V F E + AL HK+ IG R+I++ T + + ++ + +N S + +
Sbjct: 476 VEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDMIRKRLQNFSYDQREILMNA 535
Query: 547 NGLSAQQPMLSHLAQVP 563
G S + +H++ +P
Sbjct: 536 EGESGLPKLCAHISNIP 552
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL HK +I R+I+V + + Q F
Sbjct: 468 GKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDMIRKRLQNFSYD 527
Query: 436 GAQVIIRMRG-------------LPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVK 480
++++ G +PY T +++ F E A ENS ++
Sbjct: 528 QREILMNAEGESGLPKLCAHISNIPYNITKIEILQFLEGLAVEENSVQIL---------V 578
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A KA H++ + R + L T E++ +
Sbjct: 579 DNNGQGLGQALVQFKAEDDAHKAERLHRKKLNGRDVNLRLITVEEMRDI 627
>gi|37932182|gb|AAP69824.1| SWAN ribonucleoprotein [Xenopus laevis]
Length = 877
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + G+ + GR NG A+V+ I ALKR++ + +R+IEV+ A +I V
Sbjct: 327 LRIDGIVILTDPMGRHNGSALVKLITPHDTFEALKRNRMLMGQRFIEVSPATERQWI-VN 385
Query: 423 GGNNNEAQAFLTRG-----AQVIIR-----------------------MRGLPYECTAKQ 454
GG+ + Q G Q+I R ++GLP+E K
Sbjct: 386 GGHMLKQQNVGHHGPPPLMQQLITRSKSPNPQSRPRSRSPHEHGFCVYLKGLPHEAENKH 445
Query: 455 VIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIR 514
VIDFF+ N++ E+ + +GKATG+ F+ F EE+ AL +HK+ +G R
Sbjct: 446 VIDFFK-----KLNIV--EDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 498
Query: 515 YIEL 518
++++
Sbjct: 499 FVQV 502
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAG- 423
+ + + G+ GE + F ++E AL RHK ++ R+++V TK + I++
Sbjct: 460 IYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNRFVQVHPITKKAMLEKIDMIHK 519
Query: 424 -------GNNNEA---QAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE 473
G + +A F G ++ + LPY K + FF S E
Sbjct: 520 KMQSYNYGEHKDAPLDAEFDKHGPRLWGHLSNLPYSIMRKDISHFFI-----SEGFAIDE 574
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
V + +G+ G A V F E++A K+ H++ + R + L
Sbjct: 575 NAVQLLTDNNGQCIGQALVQFRSEDDARKSERLHRKKLNGRDVFL 619
>gi|428170681|gb|EKX39604.1| hypothetical protein GUITHDRAFT_54250, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 77.8 bits (190), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA---- 422
G+ LS GR GEA V F + AL R + ++KRY+EV ++ ED +VA
Sbjct: 29 GINFVLSHGGRPAGEAFVTFETENDCRRALMRDRDLMNKRYVEVYPSS-EDEKHVAITSA 87
Query: 423 ---GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
++ + + + ++++RGLPY TA + FF ++ E+G++
Sbjct: 88 VSYAQDDQSSGGDPSTSYKGVVKLRGLPYSITADDIRSFFG-------HLSIKEDGIIIC 140
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
+ + G+AFV F E D+A+ K ++ IG RY+E+FRS+ A+
Sbjct: 141 LNRERRNNGEAFVEFTDEYVVDEAVKKDRQMIGSRYVEVFRSSKAD 186
Score = 58.9 bits (141), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 33/149 (22%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I R+RGLPY + +FF+ C ++ ++G+ FV G+ G+AFV FE E +
Sbjct: 1 IARVRGLPYSAATADIEEFFKG-----CAIL--KDGINFVLSHGGRPAGEAFVTFETEND 53
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+AL + ++ + RY+E++ S+ E + + +++ + +
Sbjct: 54 CRRALMRDRDLMNKRYVEVYPSSEDEKHVAITSAVSYAQDDQSSGGD------------- 100
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
S + K ++LRGLPY
Sbjct: 101 -------------PSTSYKGVVKLRGLPY 116
>gi|255071701|ref|XP_002499525.1| predicted protein [Micromonas sp. RCC299]
gi|226514787|gb|ACO60783.1| predicted protein [Micromonas sp. RCC299]
Length = 251
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 18/159 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ +++FF+ + +D VL V++ DG+ATG+A+VLF +
Sbjct: 20 VVRLRGLPFNAGEFDILEFFQG-----LDPVD----VLIVRR-DGRATGEAYVLFANPMQ 69
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME--LPKNNSLTSSNNGLSAQQPMLS 557
D AL K++ +G RYIE+FRS + + + P +NGL++ L+
Sbjct: 70 MDFALQKNRGPMGRRYIEVFRSKKQDYYYAVAHAVNEPTPHGTDFYGGDNGLASGAGHLA 129
Query: 558 HLAQV-----PVPY-LPQHIITSGTRKDCIRLRGLPYEA 590
H+A V PVP+ P + +++RGLP+ A
Sbjct: 130 HVAGVGGPAPPVPHGAPAAVRPPQEHTGVLKMRGLPFSA 168
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 41/194 (21%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---------------IN 420
GR GEA V F + D AL++++ + +RYIEV ++ +D+ +
Sbjct: 54 GRATGEAYVLFANPMQMDFALQKNRGPMGRRYIEVFRSKKQDYYYAVAHAVNEPTPHGTD 113
Query: 421 VAGGNNNEAQAF---------------LTRGAQVIIR----------MRGLPYECTAKQV 455
GG+N A + GA +R MRGLP+ T +
Sbjct: 114 FYGGDNGLASGAGHLAHVAGVGGPAPPVPHGAPAAVRPPQEHTGVLKMRGLPFSATKDDI 173
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRY 515
I F++ + + + + V DG+ +G AFV F E+A A+S+ + ++G RY
Sbjct: 174 ITFYDDPALSVTAPLT-HDSIHIVTSLDGRPSGMAFVEFASAEDAKAAMSRDRCTMGSRY 232
Query: 516 IELFRSTTAEVQQV 529
+ELF S+ E +
Sbjct: 233 VELFPSSREEATRA 246
>gi|18266700|ref|NP_543172.1| heterogeneous nuclear ribonucleoprotein H [Rattus norvegicus]
gi|18104446|gb|AAL59557.1| Ratsg1 [Rattus norvegicus]
Length = 372
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 406 RYIEVTKANG--EDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RY+EV K+N D++ G N+ A +R+RGLP+ C+ ++++ FF +G
Sbjct: 4 RYVEVFKSNNVEMDWVLKHTGPNSPDTA-----NDGFVRLRGLPFGCSEEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
E N G+ G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 58 EIVPN------GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSR 111
Query: 524 AEVQ 527
AEV+
Sbjct: 112 AEVR 115
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 214 VHMRGLPYRATENDIYNFFSPLNPVRVHIETG---------PDGRVTGEADVEFATHEDA 264
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 265 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 318
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 63 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 110
>gi|193636729|ref|XP_001950119.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Acyrthosiphon pisum]
Length = 440
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 18/185 (9%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV- 410
LNT+ + G GV ++ G+ + +A V +E ALK+ + ++ RYI+V
Sbjct: 42 FLNTLGEAKVKDGASGVHFTMNRKGKPSSQAYVEMESEESLKAALKKDREYMGNRYIKVF 101
Query: 411 --TKANGEDFINVAGGN-NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSC 467
++ E I + G +NE +R+RGLP++ T ++++FF+ G E +
Sbjct: 102 PSKRSEMEWAIKITGSTLDNEL-------YDNCVRIRGLPFDYTKNEIVEFFQ-GLEIT- 152
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+ + V G+ +AFV F E +KAL KH E I RYIE+FRS+ E++
Sbjct: 153 -----PDDITIVINSKGRRMKEAFVQFVNRENLEKALQKHMEKIRFRYIEVFRSSLVEIR 207
Query: 528 QVLNK 532
+ L +
Sbjct: 208 KSLKR 212
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++M GL TA +I F T V DG GV F GK + A+V E EE
Sbjct: 24 VVKMHGLSLSTTADDIIKFL--NTLGEAKVKDGASGVHFTMNRKGKPSSQAYVEMESEES 81
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL K +E +G RYI++F S +E++ + T
Sbjct: 82 LKAALKKDREYMGNRYIKVFPSKRSEMEWAIKIT 115
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 62 VEHILEFL---GEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ I++FL GE GVH N +G+PS +A+++M+SE S L A L+ +R +
Sbjct: 36 ADDIIKFLNTLGEAKVKDGASGVHFTMNRKGKPSSQAYVEMESEES--LKAALKKDREYM 93
Query: 119 FGKKQRYIEVFQCSGEDMNLVL 140
RYI+VF +M +
Sbjct: 94 ---GNRYIKVFPSKRSEMEWAI 112
>gi|226487874|emb|CAX75602.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 150
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 44/158 (27%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA--------GTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
++R+RGLP+ A +I+FF+ C + G+ G+ F + P+G++ G+AF
Sbjct: 4 VVRIRGLPFSANADDIINFFKGTLVFRVFFNVFTDCTIRGGKRGIYFPQGPNGRSNGEAF 63
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+ + +++ +KA++ H E +G RYIE+F S + E+ NN++ S
Sbjct: 64 IELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSEEL------------NNAMGS------- 104
Query: 552 QQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
+P S P +H+ +RLRGLPY+
Sbjct: 105 -RPFSS-------PNRREHV---------VRLRGLPYD 125
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR NGEA + ++ ++ A+ H H+ +RYIEV + E+ N G ++ F +
Sbjct: 56 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSEELNNAMG-----SRPFSSP 110
Query: 436 G-AQVIIRMRGLPYECTAKQVIDFF 459
+ ++R+RGLPY+ K++ FF
Sbjct: 111 NRREHVVRLRGLPYDTEKKEIYAFF 135
Score = 43.1 bits (100), Expect = 0.44, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 54 IQGFKKVLVEHILEFLGEFASNIVYQGVHMVYNSQG---QPSGEAFIQMDSEHSAYLAAQ 110
I FK LV + F F + G +Y QG + +GEAFI++DS+ A
Sbjct: 20 INFFKGTLVFRV--FFNVFTDCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDDKE-KAM 76
Query: 111 LRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
HN +M +RYIEVF E++N + G P +SP
Sbjct: 77 AHHNEHM----GRRYIEVFDSCSEELNNAM-GSRPFSSP 110
>gi|256071585|ref|XP_002572120.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645121|emb|CCD60182.1| heterogeneous nuclear ribonucleoprotein-related [Schistosoma
mansoni]
Length = 1068
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 42/164 (25%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVA+ L+ GRR+ AIV F D ++ +AL R++HH+
Sbjct: 419 GGVAIRLTD-GRRSNTAIVAFDDSKNAQLALARNQHHL---------------------- 455
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ +T A ++ I+FF A +M E+G+ V PD +
Sbjct: 456 ---CGSLMTEIA-------------SSTSDIEFFNAV---QAPIMFNEQGIYLVVYPDQR 496
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
TGDAF+LF + A KAL +HK+ +G RY+ELF+++ +E+ Q+
Sbjct: 497 PTGDAFILFCNDHIATKALIRHKDYLGDRYVELFKASPSEMVQI 540
>gi|413946699|gb|AFW79348.1| hypothetical protein ZEAMMB73_203104 [Zea mays]
Length = 242
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT- 434
GR GEA V F + AL R++ ++ +RY+EV + +++ + ++ F +
Sbjct: 69 GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKQEYYSAIANEVSQGGYFESE 128
Query: 435 -----------------RGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+G+ ++++RGLPY T + +I FF EE
Sbjct: 129 CRRSSPPPRPPKKTAEDKGSMEYTEVLKLRGLPYSATTEDIIKFF-------LEYELTEE 181
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
V + DGKATG+AFV F E A A+ K K +IG RY+ELF ST E + +
Sbjct: 182 NVHIAIRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRARTR 239
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +
Sbjct: 36 VRLRGLPFDCNDIDICKFFVG-----LDIVD----CLLVNK-NGRFTGEAFVVFPTAMQT 85
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S S A
Sbjct: 86 EFALHRNRQNMGRRYVEVFRCKKQEYYSAIAN--EVSQGGYFESECRRSSPPPRPPKKTA 143
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
+ S + ++LRGLPY A + FF+
Sbjct: 144 EDK---------GSMEYTEVLKLRGLPYSATTEDIIKFFL 174
>gi|324507711|gb|ADY43264.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 435
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYI 408
S + + + Q L + V L+A GR +GE V D + A K K + RYI
Sbjct: 17 FSAKEDDVRNFLQGLYVRSVTFTLTATGRASGECYVELTDAAAVEEAKKFDKKEMSSRYI 76
Query: 409 EVTKANGEDF--------INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFE 460
EV + + I A N ++R+RG+P+ T + +FF
Sbjct: 77 EVFSVSESEVSWMIRHGVIKSADSNGTSTGT----SNNYVVRLRGIPFSATVADIKEFF- 131
Query: 461 AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
+ +V D V+ K+P G+ +G+AFV ++ A+ AL ++K+++G RY+E+FR
Sbjct: 132 ----SGLDVAD----VVIDKEPGGRPSGEAFVRLANKQHAEMALERNKKNMGTRYVEVFR 183
Query: 521 STTAEVQQV 529
S+ E++
Sbjct: 184 SSGEEMENA 192
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY A + DFF+ N ++ + D + +GDA+VLF EA
Sbjct: 277 VYMRGLPYNANALDIEDFFKP-----LNCVE----IRLGYNEDRRPSGDAYVLFSTMAEA 327
Query: 501 DKALSKHKESIGIRYIELF 519
ALS++K+SIG RYIELF
Sbjct: 328 RDALSRNKKSIGTRYIELF 346
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF S + V + G+PSGEAF+++ ++ A +A + R+ +NM RY+EVF+
Sbjct: 129 EFFSGLDVADVVIDKEPGGRPSGEAFVRLANKQHAEMALE-RNKKNM----GTRYVEVFR 183
Query: 131 CSGEDM 136
SGE+M
Sbjct: 184 SSGEEM 189
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 37/161 (22%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ V +F + S V F G+A+G+ +V
Sbjct: 10 VRLRGLPFSAKEDDVRNFLQGLYVRS---------VTFTLTATGRASGECYVELTDAAAV 60
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
++A K+ + RYIE+F + +EV ++ + ++ +NG S
Sbjct: 61 EEAKKFDKKEMSSRYIEVFSVSESEVSWMIRHGV------IKSADSNGTS---------- 104
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
T + +RLRG+P+ A + FF G
Sbjct: 105 ------------TGTSNNYVVRLRGIPFSATVADIKEFFSG 133
>gi|449280564|gb|EMC87832.1| G-rich sequence factor 1, partial [Columba livia]
Length = 331
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ GRR G+A++ + AL++H ++ RY++V + + D ++
Sbjct: 36 GENGIHFLLNRDGRRRGDALIELESKADVQRALEKHLRYMGPRYVKVFEVHDSDVESLLR 95
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+E+QA + G ++ +RGLP+ T + DFF + + D + FV + +
Sbjct: 96 SLRDESQA-INDG---VVMLRGLPFSSTEDDIADFF-----SGLKITD----IAFVYRGE 142
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+ TG+AFV F + A KALS+H+E +G RYIE++ S ++Q+
Sbjct: 143 -RRTGEAFVQFAAPDMAAKALSRHREYMGNRYIEVYVSRKHQMQR 186
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +G P+ CT + V+ FF +SC + +GE G+ F+ DG+ GDA + E + +
Sbjct: 9 LIRAQGFPFSCTEEDVLTFF-----DSCRIRNGENGIHFLLNRDGRRRGDALIELESKAD 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+AL KH +G RY+++F ++V+ +L
Sbjct: 64 VQRALEKHLRYMGPRYVKVFEVHDSDVESLLR 95
>gi|344240722|gb|EGV96825.1| Heterogeneous nuclear ribonucleoprotein F [Cricetulus griseus]
Length = 241
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 335 GNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDM 394
G V LC L+ + + + N + G+ GV ++ GR++GEA V + +
Sbjct: 9 GYVVKLCGLLWSGSIEDVQNFLSNCTIHDGVSGVHFIYTSEGRQSGEAFVELQSENDVKL 68
Query: 395 ALKRHKHH--IDKRYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYEC 450
ALK+ K + RYIEV K++ D++ G+N A +R+ GLP+ C
Sbjct: 69 ALKKKKDRESMGHRYIEVFKSHRTKMDWVLKHSGSNRANSA-----NDGFVRLPGLPFGC 123
Query: 451 TAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKES 510
T ++++ FF +G E N G+ P+GK TG+AF+ +E A+KAL KHKE
Sbjct: 124 TKEEIVQFF-SGLEIVPN------GITLPVDPEGKITGEAFIQIASQELAEKALGKHKER 176
Query: 511 IG 512
IG
Sbjct: 177 IG 178
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++ GL + + + V +F ++C + DG GV F+ +G+ +G+AFV +
Sbjct: 7 GEGYVVKLCGLLWSGSIEDVQNFL-----SNCTIHDGVSGVHFIYTSEGRQSGEAFVELQ 61
Query: 496 KEEEADKALSKHK--ESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E + AL K K ES+G RYIE+F+S ++ VL + +N S+N+G
Sbjct: 62 SENDVKLALKKKKDRESMGHRYIEVFKSHRTKMDWVLKHS----GSNRANSANDGF 113
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + GVH +Y S+G+ SGEAF+++ SE+ LA + + +R +
Sbjct: 23 IEDVQNFLSNCTIHDGVSGVHFIYTSEGRQSGEAFVELQSENDVKLALKKKKDRESM--- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ M+ VL
Sbjct: 80 GHRYIEVFKSHRTKMDWVL 98
>gi|297746312|emb|CBI16368.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA + AL+R++ ++ +RY+EV ++ +++ NE TR
Sbjct: 91 GRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYVEVFRSKRQEYYKAIA---NEVSD--TR 145
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++R+RGLP+ + + ++DFF+ + + E+ + +G+ TG+AFV F
Sbjct: 146 GG--VLRLRGLPFSASKEDIMDFFK-------DFVLSEDSIHMTVNSEGRPTGEAFVEFT 196
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A++K + ++G RYIELF S+ E+ + + +
Sbjct: 197 NAEDSKAAMAKDRMTLGSRYIELFPSSLEELDEAVAR 233
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 52/169 (30%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++C+ V +FF +S +++D VLFV K +G+ TG+AF + +
Sbjct: 57 VVRLRGLPFDCSEADVAEFF-----HSLDIVD----VLFVHK-NGRFTGEAFCVLGYPLQ 106
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ AL ++++++G RY+E+FRS E + + +
Sbjct: 107 VEFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEV------------------------- 141
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALC-ILMDIF--FVGQQDS 605
S TR +RLRGLP+ A +MD F FV +DS
Sbjct: 142 --------------SDTRGGVLRLRGLPFSASKEDIMDFFKDFVLSEDS 176
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQM-DSEHSAYLAAQLRHNRNMIFGK 121
E I++F +F + +HM NS+G+P+GEAF++ ++E S A+ R M G
Sbjct: 161 EDIMDFFKDFV--LSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDR----MTLG- 213
Query: 122 KQRYIEVFQCSGEDMN 137
RYIE+F S E+++
Sbjct: 214 -SRYIELFPSSLEELD 228
>gi|148700120|gb|EDL32067.1| mCG11326, isoform CRA_d [Mus musculus]
Length = 186
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 42.0 bits (97), Expect = 0.95, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|159164063|pdb|2DB1|A Chain A, Solution Structure Of The Rna Binding Domain In
Heterogeneous Nuclear Ribonucleoprotein F Homolog
Length = 118
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 15 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 69
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E++ AL K +ES+G RYIE+F+S E+ VL +
Sbjct: 70 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS 107
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 31 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 85
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
RYIEVF+ +M+ VL P ++ S
Sbjct: 86 GHRYIEVFKSHRTEMDWVLKHSGPNSASGPS 116
>gi|149043915|gb|EDL97366.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_d [Rattus norvegicus]
Length = 186
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 42.0 bits (97), Expect = 1.00, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|348520489|ref|XP_003447760.1| PREDICTED: hypothetical protein LOC100697955 [Oreochromis
niloticus]
Length = 1432
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMA 395
NP L L+QN+ S + + + LG+ V L GR G A+V+F + A
Sbjct: 301 NPDELFVLLQNLPFSCSEVEVREFFRGLGVDAVRLMRDGQGRPTGRAMVKFFSPQDSFEA 360
Query: 396 LKRHKHHIDKRYIEVTKANGEDFINV--------------------------------AG 423
+KR + +R+IE+T + + ++ AG
Sbjct: 361 VKRGGGMMGQRFIEITPGSERQWASLNDGLAGHAPHNSSKSNSINESQDLQHRRGNVEAG 420
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G + A++ + + ++GLPYE KQ+ +FF+ N+ E+ + P+
Sbjct: 421 GRDQRARSRSPHRQEFCVYLKGLPYEADKKQIKEFFK-------NLDIVEDSIYIAYGPN 473
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
G+ATG+ F+ F+ E++ AL H + +G R+I++
Sbjct: 474 GRATGEGFLEFKSEQDYKGALGAHMQYMGSRFIQV 508
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++ + ++ LP+ C+ +V +FF G + V ++ G+ TG A V F
Sbjct: 304 ELFVLLQNLPFSCSEVEVREFFRG---------LGVDAVRLMRDGQGRPTGRAMVKFFSP 354
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
+++ +A+ + +G R+IE+ + + + + +NS S +N ++ Q +
Sbjct: 355 QDSFEAVKRGGGMMGQRFIEITPGSERQWASLNDGLAGHAPHNS--SKSNSINESQDLQH 412
Query: 558 HLAQVPVPYLPQHIITSGTRKD--CIRLRGLPYEALCILMDIFF 599
V Q + + C+ L+GLPYEA + FF
Sbjct: 413 RRGNVEAGGRDQRARSRSPHRQEFCVYLKGLPYEADKKQIKEFF 456
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 423 GGNNNEAQAFLTRGAQ--VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
GG+NN + RGA I++++ +P+ T +++DFF V+ G + F +
Sbjct: 809 GGSNNPSS---QRGAAGPTIVKLQNMPFTVTVDEIMDFFYG-----YQVLPGSVCLQFNE 860
Query: 481 KPDGKATGDAFVLFEKEEEADKA-LSKHKESIGIRYIELFRSTTAEVQ 527
K G TG+A V F+ EEA A + + IG R +++ ++V+
Sbjct: 861 K--GLPTGEAMVAFQSHEEATAAVMDLNDRPIGARKVKISLDCVSKVE 906
>gi|82621148|gb|ABB86262.1| unknown [Solanum tuberosum]
Length = 364
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 30/170 (17%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-----------VAGG 424
GR GEA V F + A+ + + I RYIE+ ++ E+ V G
Sbjct: 210 GRPTGEAFVEFASADDSRAAMAKDRMTIGNRYIELFASSSEELEEAVSRGRVLEKPVDGR 269
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKP 482
+ NE + I+RMRGLP+ ++DFF+ A TE++ +V F+
Sbjct: 270 DPNEVTS--------ILRMRGLPFSAGKDDIMDFFKDFALTEDAIHVT-------FLS-- 312
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
DG+ TG+AFV F ++A AL+K + ++G RY+ELF S+ ++ +++
Sbjct: 313 DGRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPSSIEDMNHAISR 362
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 59/241 (24%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA D AL+R++ +I +RY+EV ++ E++ + + +R
Sbjct: 97 GRFTGEAYCVLGYPLQVDFALQRNRQNIGRRYVEVFRSKKEEYYKAIAN-----EVYDSR 151
Query: 436 GAQV-----------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
G V ++ +RGLP+ + + +IDFF+ + E+ +
Sbjct: 152 GGSVPRARSADESKTLPEHTGVLWLRGLPFSASKEDIIDFFK-------DFELPEKSIHI 204
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
+G+ TG+AFV F +++ A++K + +IG RYIELF S++ E+++ +++ L K
Sbjct: 205 TATFEGRPTGEAFVEFASADDSRAAMAKDRMTIGNRYIELFASSSEELEEAVSRGRVLEK 264
Query: 539 NNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA-LCILMDI 597
PV + +TS +R+RGLP+ A +MD
Sbjct: 265 ------------------------PVDGRDPNEVTS-----ILRMRGLPFSAGKDDIMDF 295
Query: 598 F 598
F
Sbjct: 296 F 296
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 30/151 (19%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++C+ ++ DF + +V+D VL V K G+ TG+A+ + +
Sbjct: 63 VVRLRGLPFDCSETEIADFL-----HGLDVVD----VLLVHKG-GRFTGEAYCVLGYPLQ 112
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +++++IG RY+E+FRS E + + + + S+ + + ++
Sbjct: 113 VDFALQRNRQNIGRRYVEVFRSKKEEYYKAIANEVYDSRGGSVPRARSADESKT------ 166
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
LP+H + LRGLP+ A
Sbjct: 167 -------LPEHT-------GVLWLRGLPFSA 183
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ I++F +FA + +H+ + S G+P+GEAF++ S A A L +R M G
Sbjct: 290 DDIMDFFKDFA--LTEDAIHVTFLSDGRPTGEAFVEFASTDDA--KAALAKDR-MTLG-- 342
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RY+E+F S EDMN ++
Sbjct: 343 SRYVELFPSSIEDMNHAIS 361
>gi|395735012|ref|XP_002814888.2| PREDICTED: G-rich sequence factor 1 [Pongo abelii]
Length = 459
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + GE G+ F+ DGK GDA + E E++
Sbjct: 152 LIRAQGLPWSCTVEDVLNFF-----SDCRIRKGENGIHFLLNRDGKRRGDALIEMESEQD 206
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 207 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 252
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 253 ---------------------VRLRGLPYS--CNEKDIVDFFAG 273
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 179 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 238
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 239 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 286
Query: 484 G-KATGDAFVLFE 495
G + TG+A+V E
Sbjct: 287 GRRKTGEAYVYIE 299
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 164 VEDVLNFFSDCRIRKGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 219
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 220 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 249
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 369 EAADFGATSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 419
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 420 GEADVHFETHEDAVAAMHKDRSHVYHRYIELF 451
>gi|388507286|gb|AFK41709.1| unknown [Lotus japonicus]
Length = 163
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I++MRGLP+ T Q++DFF+ + E+ V +PDGKATG+A+V F +E
Sbjct: 75 ILKMRGLPFAVTKSQIVDFFK-------DYKLIEDRVHIACRPDGKATGEAYVEFVSPDE 127
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
A +A+SK K IG RY+ELF ST E ++ +++ +
Sbjct: 128 AKRAMSKDKMMIGSRYVELFPSTPDEARRAESRSRQ 163
>gi|148233462|ref|NP_001087973.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Xenopus laevis]
gi|52138903|gb|AAH82630.1| LOC494658 protein [Xenopus laevis]
Length = 342
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 10/123 (8%)
Query: 406 RYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN 465
RYIEV K+N + V N+ + + G +R+RGLP+ C+ ++++ FF +G
Sbjct: 4 RYIEVFKSNNTEMEWVLKHNSTDDVETDSDG---TVRLRGLPFGCSKEEIVQFF-SGLRI 59
Query: 466 SCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
N G+ G++TG+AFV F +E A+ AL KHKE IG RYIE+F+S+ E
Sbjct: 60 VPN------GITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRGE 113
Query: 526 VQQ 528
++
Sbjct: 114 IRS 116
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ + + +FF T ++ G DG+ATG+A V F E+
Sbjct: 212 FVHMRGLPFRASESDIANFFSPLTPIRVHIDVG---------ADGRATGEADVEFATHED 262
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RYIELF ++TA
Sbjct: 263 AVAAMSKDKNNMQHRYIELFLNSTA 287
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 63 GITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 110
>gi|343961567|dbj|BAK62373.1| heterogeneous nuclear ribonucleoprotein H [Pan troglodytes]
Length = 357
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+R+RGLP+ C+ ++++ FF +G E N G+ G++TG+AFV F +E
Sbjct: 20 FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQGRSTGEAFVQFASQEI 72
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 73 AEKALKKHKERIGHRYIEIFKSSRAEVR 100
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 199 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 249
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 250 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 303
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 48 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 95
>gi|312065923|ref|XP_003136024.1| heterogeneous nuclear ribonucleoprotein H [Loa loa]
Length = 383
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT-----KANGEDFINVA 422
+ L GR +GE V F +E D AL + K +I KRY+E+ +++ +D
Sbjct: 36 IKLTKDRDGRASGEGYVVFSSREDYDFALTKDKKYIGKRYVELQQVSSMESDYDDGDRRY 95
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG A L I+R+ GLPY CT ++++ FFE + V+ +
Sbjct: 96 GGPV--ADPNLPGRETSIVRLGGLPYGCTKEEIVRFFEPLEIADRGI------VMTYDRY 147
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESI-------------GIRYIELFRSTTAEVQQV 529
GK G+AFV F E+ A KAL+K+KE I +RY++++ S+ E+ +
Sbjct: 148 SGKPKGEAFVAFTDEDSASKALAKNKEYIQHRYCSLTVYHISSLRYVDIYPSSYGEMLRA 207
Query: 530 LNKTME 535
L+ ++
Sbjct: 208 LDGGLD 213
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
I++ RGLP+ CT + +FF + + K DG+A+G+ +V+F
Sbjct: 5 DFIMKCRGLPWSCTEDDLREFFGEAARSITQIK-------LTKDRDGRASGEGYVVFSSR 57
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAE 525
E+ D AL+K K+ IG RY+EL + ++ E
Sbjct: 58 EDYDFALTKDKKYIGKRYVELQQVSSME 85
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ IRMRGLPY T + +IDFF+ S + VL+ D + +G+A V F
Sbjct: 307 EYCIRMRGLPYRATERDIIDFFQPLRPASID-------VLYEYGTD-RPSGEAIVEFRNR 358
Query: 498 EEADKALSKHKESIGIRYIEL 518
+ D A+ +++ +G RY+EL
Sbjct: 359 ADFDAAMQRNRNYMGSRYVEL 379
>gi|355761375|gb|EHH61795.1| hypothetical protein EGM_19914 [Macaca fascicularis]
Length = 357
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+R+RGLP+ C+ ++++ FF +G E N G+ G++TG+AFV F +E
Sbjct: 20 FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQGRSTGEAFVQFASQEI 72
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 73 AEKALKKHKERIGHRYIEIFKSSRAEVR 100
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 199 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 249
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 250 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAFGSQ 303
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 48 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 95
>gi|119574668|gb|EAW54283.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_d
[Homo sapiens]
Length = 149
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|365812823|pdb|2LMI|A Chain A, Nmr Structure Of The Protein Bc040485 From Homo Sapiens
Length = 107
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 13 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 67
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
KAL KH+ +G RY+E++ +V ++
Sbjct: 68 VQKALEKHRMYMGQRYVEVYEINNEDVDALM 98
Score = 46.2 bits (108), Expect = 0.047, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M
Sbjct: 25 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHRMYM---- 79
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSP 149
QRY+EV++ + ED++ ++ + +SP
Sbjct: 80 GQRYVEVYEINNEDVDALMKSLQVKSSP 107
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED 417
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED
Sbjct: 40 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNED 93
>gi|431904171|gb|ELK09593.1| Heterogeneous nuclear ribonucleoprotein H3 [Pteropus alecto]
Length = 405
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 77 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 129
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 130 ENALGKHKERIGHRYIEIFRSSRSEIK 156
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 255 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 305
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 306 AVAAMSKDKNNMQHRYIELFLNST 329
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 104 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 151
>gi|159163318|pdb|1WG5|A Chain A, Solution Structure Of The First Rrm Domain In
Heterogeneous Nuclear Ribonucleoprotein H
Length = 104
Score = 75.9 bits (185), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF +G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVDFQGRSTGEAFVQFASQEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 71 EKALKKHKERIGHRYIEIFKSSRAEVR 97
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 45 GMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 92
>gi|327277958|ref|XP_003223730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Anolis carolinensis]
Length = 341
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 19 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKEIA 71
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+KAL KHKE IG RYIE+F+S+ +E++ +
Sbjct: 72 EKALGKHKERIGHRYIEIFKSSKSEIRGFYD 102
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF T ++ G DG+ATG+A V F E+
Sbjct: 197 FVHMRGLPFRATENDIANFFSPLTPIRVHIDIG---------ADGRATGEADVEFVTHED 247
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K + RYIELF ++T
Sbjct: 248 AVAAMSKDKNHMQHRYIELFLNST 271
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 46 GITLTLDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSS 93
>gi|348575706|ref|XP_003473629.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Cavia
porcellus]
Length = 372
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 44 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 96
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+ AL KHKE IG RYIE+FRS+ +E++ +
Sbjct: 97 ENALGKHKERIGHRYIEIFRSSRSEIKGFYD 127
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 222 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 272
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 273 AVAAMSKDKNNMQHRYIELFLNST 296
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 71 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 118
>gi|112491340|pdb|2HGL|A Chain A, Nmr Structure Of The First Qrrm Domain Of Human Hnrnp F
gi|297787485|pdb|2KFY|A Chain A, Nmr Structure Of The First Qrrm Of Hnrnp F In Complex With
Agggau G- Tract Rna
Length = 136
Score = 75.5 bits (184), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 42 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 96
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E++ AL K +ES+G RYIE+F+S E+ VL +
Sbjct: 97 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS 134
Score = 48.9 bits (115), Expect = 0.007, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 58 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 112
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 113 GHRYIEVFKSHRTEMDWVL 131
>gi|62898443|dbj|BAD97161.1| heterogeneous nuclear ribonucleoprotein H3 isoform a variant [Homo
sapiens]
Length = 346
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYI+LF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIKLFLNST 270
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|14141157|ref|NP_036339.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Homo sapiens]
gi|343780936|ref|NP_001230484.1| heterogeneous nuclear ribonucleoprotein H3 [Sus scrofa]
gi|388452508|ref|NP_001253678.1| heterogeneous nuclear ribonucleoprotein H3 [Macaca mulatta]
gi|73952781|ref|XP_536369.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Canis lupus familiaris]
gi|149689928|ref|XP_001503654.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Equus caballus]
gi|291404271|ref|XP_002718501.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Oryctolagus cuniculus]
gi|296220546|ref|XP_002756352.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Callithrix jacchus]
gi|332218213|ref|XP_003258253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Nomascus leucogenys]
gi|332834180|ref|XP_521495.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Pan troglodytes]
gi|397520483|ref|XP_003830346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Pan paniscus]
gi|402880658|ref|XP_003903915.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Papio anubis]
gi|403273867|ref|XP_003928719.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Saimiri boliviensis boliviensis]
gi|410975227|ref|XP_003994035.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Felis catus]
gi|410975229|ref|XP_003994036.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Felis catus]
gi|426364932|ref|XP_004049545.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Gorilla gorilla gorilla]
gi|23503095|sp|P31942.2|HNRH3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H3;
Short=hnRNP H3; AltName: Full=Heterogeneous nuclear
ribonucleoprotein 2H9; Short=hnRNP 2H9
gi|5542020|gb|AAD45179.1|L32610_1 ribonucleoprotein [Homo sapiens]
gi|7739436|gb|AAF68843.1| hnRNP 2H9 [Homo sapiens]
gi|119574665|gb|EAW54280.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_a
[Homo sapiens]
gi|119574670|gb|EAW54285.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_a
[Homo sapiens]
gi|351702487|gb|EHB05406.1| Heterogeneous nuclear ribonucleoprotein H3 [Heterocephalus glaber]
gi|355562560|gb|EHH19154.1| hypothetical protein EGK_19802 [Macaca mulatta]
gi|355782891|gb|EHH64812.1| hypothetical protein EGM_18125 [Macaca fascicularis]
gi|380784275|gb|AFE64013.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Macaca
mulatta]
gi|380812322|gb|AFE78035.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Macaca
mulatta]
gi|410221428|gb|JAA07933.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410221430|gb|JAA07934.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410258984|gb|JAA17458.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410258988|gb|JAA17460.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410302442|gb|JAA29821.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410302446|gb|JAA29823.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410342067|gb|JAA39980.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410342069|gb|JAA39981.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|432106705|gb|ELK32357.1| Heterogeneous nuclear ribonucleoprotein H3 [Myotis davidii]
gi|440895821|gb|ELR47915.1| Heterogeneous nuclear ribonucleoprotein H3 [Bos grunniens mutus]
Length = 346
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|395820622|ref|XP_003783662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Otolemur garnettii]
Length = 346
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|354477666|ref|XP_003501040.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Cricetulus griseus]
Length = 340
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|344275081|ref|XP_003409342.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Loxodonta africana]
Length = 350
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 197 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 247
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 248 AVAAMSKDKNNMQHRYIELFLNST 271
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|119637823|ref|NP_001073293.1| heterogeneous nuclear ribonucleoprotein H3 [Mus musculus]
gi|157818423|ref|NP_001102002.1| heterogeneous nuclear ribonucleoprotein H3 [Rattus norvegicus]
gi|148700117|gb|EDL32064.1| mCG11326, isoform CRA_a [Mus musculus]
gi|149043914|gb|EDL97365.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_c [Rattus norvegicus]
gi|182887935|gb|AAI60206.1| Heterogeneous nuclear ribonucleoprotein H3 [synthetic construct]
Length = 346
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|327277960|ref|XP_003223731.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Anolis carolinensis]
Length = 326
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 19 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKEIA 71
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+KAL KHKE IG RYIE+F+S+ +E++ +
Sbjct: 72 EKALGKHKERIGHRYIEIFKSSKSEIRGFYD 102
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF T ++ G DG+ATG+A V F E+
Sbjct: 182 FVHMRGLPFRATENDIANFFSPLTPIRVHIDIG---------ADGRATGEADVEFVTHED 232
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K + RYIELF ++T
Sbjct: 233 AVAAMSKDKNHMQHRYIELFLNST 256
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 46 GITLTLDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSS 93
>gi|334313810|ref|XP_001369254.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Monodelphis domestica]
Length = 377
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 16/127 (12%)
Query: 407 YIEVTKANG--EDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
YI K+NG D++ G N+ A + +R+RGLP+ C+ ++++ FF G E
Sbjct: 20 YILTFKSNGFEMDWVMKHNGPNDAA-------SDGTVRLRGLPFGCSKEEIVQFF-TGLE 71
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
N G+ G++TG+AFV F +E A+ AL KHKE IG RYIE+F+S+ +
Sbjct: 72 IVPN------GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRS 125
Query: 525 EVQQVLN 531
E++ +
Sbjct: 126 EIKGFYD 132
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 227 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 277
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RYIELF ++TA
Sbjct: 278 AVAAMSKDKNNMQHRYIELFLNSTA 302
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 76 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 123
>gi|148700119|gb|EDL32066.1| mCG11326, isoform CRA_c [Mus musculus]
gi|149043913|gb|EDL97364.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 314
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+ AL KHKE IG RYIE+FRS+ +E++ +
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIKGFYD 101
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|344275083|ref|XP_003409343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Loxodonta africana]
Length = 335
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 182 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 232
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 233 AVAAMSKDKNNMQHRYIELFLNST 256
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|14141159|ref|NP_067676.2| heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo sapiens]
gi|291404273|ref|XP_002718502.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Oryctolagus cuniculus]
gi|296220548|ref|XP_002756353.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Callithrix jacchus]
gi|332218215|ref|XP_003258254.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Nomascus leucogenys]
gi|332834182|ref|XP_003312632.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Pan troglodytes]
gi|338716820|ref|XP_003363523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Equus caballus]
gi|345798943|ref|XP_860394.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 3
[Canis lupus familiaris]
gi|397520485|ref|XP_003830347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Pan paniscus]
gi|402880660|ref|XP_003903916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Papio anubis]
gi|403273869|ref|XP_003928720.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Saimiri boliviensis boliviensis]
gi|410975231|ref|XP_003994037.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 3
[Felis catus]
gi|426364934|ref|XP_004049546.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Gorilla gorilla gorilla]
gi|7739443|gb|AAF68849.1|AF132361_1 hnRNP 2H9A [Homo sapiens]
gi|7739440|gb|AAF68847.1| hnRNP 2H9A [Homo sapiens]
gi|24981041|gb|AAH39824.1| Heterogeneous nuclear ribonucleoprotein H3 (2H9) [Homo sapiens]
gi|119574667|gb|EAW54282.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_c
[Homo sapiens]
gi|158256526|dbj|BAF84236.1| unnamed protein product [Homo sapiens]
gi|261861160|dbj|BAI47102.1| heterogeneous nuclear ribonucleoprotein H3 [synthetic construct]
gi|296472170|tpg|DAA14285.1| TPA: heterogeneous nuclear ribonucleoprotein H3 (2H9) [Bos taurus]
gi|380812320|gb|AFE78034.1| heterogeneous nuclear ribonucleoprotein H3 isoform b [Macaca
mulatta]
gi|410221432|gb|JAA07935.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410258986|gb|JAA17459.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410302444|gb|JAA29822.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410342071|gb|JAA39982.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
Length = 331
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 181 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 231
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 232 AVAAMSKDKNNMQHRYIELFLNST 255
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|395820624|ref|XP_003783663.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Otolemur garnettii]
Length = 331
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 181 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 231
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 232 AVAAMSKDKNNMQHRYIELFLNST 255
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|354477668|ref|XP_003501041.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Cricetulus griseus]
gi|344247616|gb|EGW03720.1| Heterogeneous nuclear ribonucleoprotein H3 [Cricetulus griseus]
Length = 325
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 181 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 231
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 232 AVAAMSKDKNNMQHRYIELFLNST 255
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|301755896|ref|XP_002913784.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Ailuropoda melanoleuca]
gi|281346969|gb|EFB22553.1| hypothetical protein PANDA_001623 [Ailuropoda melanoleuca]
Length = 346
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|308498127|ref|XP_003111250.1| CRE-HRPF-1 protein [Caenorhabditis remanei]
gi|308240798|gb|EFO84750.1| CRE-HRPF-1 protein [Caenorhabditis remanei]
Length = 558
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 24/180 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--------EDFINVAGG--- 424
GR +G+A V F +++ +ALK+ + H+ RYIEV N +DF GG
Sbjct: 40 GRTSGDATVTFSNEDDYKLALKKDREHLGSRYIEVFPMNSAPRRRGDRDDFRPRGGGPPR 99
Query: 425 -----NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
+ ++ T G IIR+RGLP+ TA+ + DF + ++ +G+L
Sbjct: 100 DRYSDRGEQHRSGGTGGPDPIIRLRGLPFSVTARDINDFLQP-----LGIV--RDGILLP 152
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-MELPK 538
+ + +G+A+++F+ E A +H ++IG RYIE+F +T E+Q+ + + +P+
Sbjct: 153 DQQRARPSGEAYIVFDMLESVQIAKQRHMKNIGHRYIEVFEATHRELQRFADDNGLRVPR 212
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRG+P+ T + V DFF N V ++ +A+GDA V+F ++
Sbjct: 482 VLRMRGVPFRATEEDVYDFFRPIRPNK---------VELIRDNQFRASGDARVIFFSRKD 532
Query: 500 ADKALSKHKESIGIRYIEL 518
D+AL K K+ +G RYIE+
Sbjct: 533 YDEALMKDKQYMGERYIEM 551
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
++ RGLP+E T + + FF N +D + K +G+ +GDA V F E++
Sbjct: 7 VQCRGLPWEATEEDLRGFFGG---NGIESVD-------IPKRNGRTSGDATVTFSNEDDY 56
Query: 501 DKALSKHKESIGIRYIELF 519
AL K +E +G RYIE+F
Sbjct: 57 KLALKKDREHLGSRYIEVF 75
>gi|392355325|ref|XP_003752006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Rattus
norvegicus]
gi|148700118|gb|EDL32065.1| mCG11326, isoform CRA_b [Mus musculus]
gi|149043912|gb|EDL97363.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 331
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+ AL KHKE IG RYIE+FRS+ +E++ +
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIKGFYD 101
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 181 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 231
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 232 AVAAMSKDKNNMQHRYIELFLNST 255
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|330864791|ref|NP_001193508.1| heterogeneous nuclear ribonucleoprotein H3 [Bos taurus]
Length = 317
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+S+ K ++ RYIELF ++T
Sbjct: 247 AVAAMSRDKNNMQHRYIELFLNST 270
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>gi|224052106|ref|XP_002190890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Taeniopygia guttata]
Length = 342
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E
Sbjct: 18 TVVRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKE 70
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 71 IAENALGKHKERIGHRYIEIFKSSKSEIR 99
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+A
Sbjct: 200 VHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDA 250
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K + RYIELF ++TA
Sbjct: 251 VAAMSKDKNHMQHRYIELFLNSTA 274
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 47 GITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 94
>gi|449269002|gb|EMC79814.1| Heterogeneous nuclear ribonucleoprotein H3 [Columba livia]
Length = 343
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E
Sbjct: 18 TVVRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKE 70
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 71 IAENALGKHKERIGHRYIEIFKSSKSEIR 99
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+A
Sbjct: 201 VHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDA 251
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K + RYIELF ++TA
Sbjct: 252 VAAMSKDKNHMQHRYIELFLNSTA 275
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 47 GITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 94
>gi|60302824|ref|NP_001012610.1| heterogeneous nuclear ribonucleoprotein H3 [Gallus gallus]
gi|60099043|emb|CAH65352.1| hypothetical protein RCJMB04_21b18 [Gallus gallus]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E
Sbjct: 18 TVVRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKE 70
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 71 IAENALGKHKERIGHRYIEIFKSSKSEIR 99
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+A
Sbjct: 200 VHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDA 250
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K + RYIELF ++TA
Sbjct: 251 VAAMSKDKNHMQHRYIELFLNSTA 274
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 47 GITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 94
>gi|224052108|ref|XP_002190951.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Taeniopygia guttata]
Length = 327
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E
Sbjct: 18 TVVRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKE 70
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 71 IAENALGKHKERIGHRYIEIFKSSKSEIR 99
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+A
Sbjct: 185 VHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDA 235
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K + RYIELF ++TA
Sbjct: 236 VAAMSKDKNHMQHRYIELFLNSTA 259
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 47 GITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 94
>gi|223944441|gb|ACN26304.1| unknown [Zea mays]
Length = 284
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + ++ ++ F +
Sbjct: 111 GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKLEYYRAIANEVSQGGYFESE 170
Query: 436 GAQV---------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+ ++++RGLPY T + +I FF EE
Sbjct: 171 YRRSSPPLSPPKKPAEDKGSMEYTEVLKLRGLPYSATTEDIIKFF-------LEYELTEE 223
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
V DGKATG+AFV F E A + K K +IG RY+ELF ST EV + +
Sbjct: 224 NVHIAISSDGKATGEAFVEFPTTEVAKTVMCKDKMTIGTRYVELFPSTPEEVSRARTR 281
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 425 NNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
N+N A A + G Q +R+RGLP++C + FF +++D L V K
Sbjct: 60 NSNLAGAGASTGIQNFPGVRLRGLPFDCNDIDICKFFVG-----LDIVD----CLLVNK- 109
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
+G+ TG+AFV+F + + AL ++++++G RY+E+FR E + + E+ +
Sbjct: 110 NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKLEYYRAIAN--EVSQGGYF 167
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
S S A+ S + ++LRGLPY A + FF+
Sbjct: 168 ESEYRRSSPPLSPPKKPAEDK---------GSMEYTEVLKLRGLPYSATTEDIIKFFL 216
>gi|281203425|gb|EFA77625.1| hypothetical protein PPL_12232 [Polysphondylium pallidum PN500]
Length = 1794
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ + +++ G+++GEA + F+D++ A H+ + RYIEV I +
Sbjct: 1180 GITILMNSHGKQSGEAYIEFVDEDAARKANDYHRKMMRHRYIEVLPKPRAAAIAALRRDG 1239
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
+ L A I+R+RGLPY T VI FF +G S N +L K +G+
Sbjct: 1240 GQHHHVL---ATKIVRLRGLPYNVTPADVISFF-SGYAISGN------NILIEKDYNGRV 1289
Query: 487 TGDAFVLFEKEEEADKALS--KHKESIGIRYIELF 519
TG+ FV F E A AL +HK +I RYIELF
Sbjct: 1290 TGEGFVEFVTFETASSALKHLQHK-AISSRYIELF 1323
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
GN+ E+ + + +RG+P+ Q+ DFF+ V G+ +
Sbjct: 1136 GNDEESDDEFRSKGETFVLIRGMPWSTNEGQIRDFFKP-------VPIMPNGITILMNSH 1188
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GK +G+A++ F E+ A KA H++ + RYIE+
Sbjct: 1189 GKQSGEAYIEFVDEDAARKANDYHRKMMRHRYIEVL 1224
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 409 EVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
E + D+ + GGN+ + ++ +++RGLPY T + DFF+
Sbjct: 1693 ERRRGKNRDYGSSGGGNHKGDHDY----SEFTVKLRGLPYSATEDSIADFFDG------- 1741
Query: 469 VMDGEEGVLFVK--KPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
GV +K G+ +G A+V + + D+AL ++K +G
Sbjct: 1742 -----LGVTNIKIIYQRGRPSGLAYVSLSSQYDYDQALKRNKNHMG 1782
>gi|395741721|ref|XP_003780739.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H3 [Pongo abelii]
Length = 346
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF + ++ G DG+ATG+A V F E+
Sbjct: 204 FVHMRGLPFRATENDIANFFSPLNQYEVHIDIG---------ADGRATGEADVEFVTHED 254
Query: 500 ADKAL-SKHKESIGIRYIELFRSTT 523
A A+ + K ++ RYIELF ++T
Sbjct: 255 AVAAMFXRIKINMQHRYIELFLNST 279
>gi|449265752|gb|EMC76898.1| RNA-binding protein 12, partial [Columba livia]
Length = 853
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 51/268 (19%)
Query: 283 LPINMNTAHLLQPMNT---PFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
LP MN + MN+ P F + P PV+ + + P P NP
Sbjct: 240 LPSGMNGSGAAVNMNSGLNPLF-----------IGPMNPVNPIPMSSQSSVKPIPINPDD 288
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH 399
L + + S + + + L + V + GR NG +V+F + ALKR+
Sbjct: 289 LYVSIHGMPFSATESDVKDFFLGLRVDAVHMLKDHVGRNNGNGLVKFFSPQDTFEALKRN 348
Query: 400 KHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQ--------------------- 438
+ + +RY+EV+ A ++ AGG+ Q G
Sbjct: 349 RMLMIQRYVEVSPATERQWV-AAGGHITFKQTMGPSGQSHPPPPQPHSRSKSPSGQKRSR 407
Query: 439 --------VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
+ ++GLP+E K VIDFF+ +++ E+ + P+GKA G+
Sbjct: 408 SRSPHEQGFCVYLKGLPFESENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKAIGEG 460
Query: 491 FVLFEKEEEADKALSKHKESIGIRYIEL 518
FV F E + AL HK+ IG R+I++
Sbjct: 461 FVEFRNEADYKAALCHHKQYIGNRFIQV 488
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL HK +I R+I+V + + Q F
Sbjct: 454 GKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDMIRKRLQNFSYD 513
Query: 436 GAQVIIRMRG-------------LPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVK 480
++++ G +PY T +++ F E A ENS ++
Sbjct: 514 QREILMNAEGEPGLPKLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDN------- 566
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A KA H++ + R + L T E++ +
Sbjct: 567 --NGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVVLRLITVEEMRDI 613
>gi|326923399|ref|XP_003207924.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Meleagris gallopavo]
Length = 323
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E
Sbjct: 18 TVVRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKE 70
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 71 IAENALGKHKERIGHRYIEIFKSSKSEIR 99
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 47 GITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 94
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
DG+ATG+A V F E+A A+SK K + RYIELF ++TA
Sbjct: 214 DGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLNSTA 255
>gi|302839324|ref|XP_002951219.1| hypothetical protein VOLCADRAFT_117772 [Volvox carteri f.
nagariensis]
gi|300263548|gb|EFJ47748.1| hypothetical protein VOLCADRAFT_117772 [Volvox carteri f.
nagariensis]
Length = 245
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ I++++GLPY T + FF A E +GV FV +PDG+ +G AF F
Sbjct: 40 SSAILKLKGLPYSATENDIRQFF-APYEL--------KGVSFVYEPDGRPSGLAFAEFVS 90
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEV-QQVLNKTMELPKNNSLTSSNNGLSAQQPM 555
+EEA KALSK+ E IG RY+ L AE+ +QV T+ +P + S S Q+
Sbjct: 91 KEEALKALSKNGEYIGQRYVRLLHVPRAEMEEQVRLGTLAIPGAAAKLRSRMMRSQQRNS 150
Query: 556 LSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
++A P+ +P T+ T I++RGLPY + + FF
Sbjct: 151 AVYMATGPLQLVP----TTAT-SPTIKIRGLPYGSSPTEILAFF 189
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 36/183 (19%)
Query: 365 LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE---VTKANGEDFINV 421
L GV+ GR +G A F+ +E AL ++ +I +RY+ V +A E+ + +
Sbjct: 67 LKGVSFVYEPDGRPSGLAFAEFVSKEEALKALSKNGEYIGQRYVRLLHVPRAEMEEQVRL 126
Query: 422 AG----GNNNEAQAFLTRGAQV---------------------IIRMRGLPYECTAKQVI 456
G + ++ + R Q I++RGLPY + +++
Sbjct: 127 GTLAIPGAAAKLRSRMMRSQQRNSAVYMATGPLQLVPTTATSPTIKIRGLPYGSSPTEIL 186
Query: 457 DFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRY 515
FF+ + G + + G+ +G+A++ F +EA +A+ ++ +G RY
Sbjct: 187 AFFQTYHYLPDTLQIGLDQL-------GRPSGEAWLSFSSPQEALRAVRDLNRHYLGTRY 239
Query: 516 IEL 518
+EL
Sbjct: 240 LEL 242
>gi|241339179|ref|XP_002408443.1| splicing factor hnRNP-F, putative [Ixodes scapularis]
gi|215497357|gb|EEC06851.1| splicing factor hnRNP-F, putative [Ixodes scapularis]
Length = 293
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + LS GR +GEA + ++ ++ L+RH HI RYIEV K+ + V
Sbjct: 22 GISGVHMTLSREGRPSGEAYIELESEQDVEVGLQRHNEHIGHRYIEVFKSKRSEMDWVVK 81
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNV-------------- 469
+ Q L G +R+RGLP+ C+ +++ FF E
Sbjct: 82 RSGAHQQDSLNDGC---VRLRGLPFGCSKEEIAQFFSGFVEEDGYGDFGGSGGARYSATG 138
Query: 470 ----MDG------EEGVL------------FVKKPDGKATGDAFVLFEKEEEADKALSKH 507
M G E + + + G+ +G+ V F EEA KA+SK
Sbjct: 139 HFVHMRGLPFRATERDIFEFFQPMNPMNVHLIYEDSGRPSGECDVEFATHEEAVKAMSKD 198
Query: 508 KESIGIRYIELFRSTT 523
K + RYIELF ++T
Sbjct: 199 KAHMQHRYIELFLNST 214
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 38/149 (25%)
Query: 453 KQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
+++++FF T N+ G GV +G+ +G+A++ E E++ + L +H E IG
Sbjct: 6 QEILNFF---TSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQDVEVGLQRHNEHIG 62
Query: 513 IRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHII 572
RYIE+F+S +E+ V+ ++ ++ S N+G
Sbjct: 63 HRYIEVFKSKRSEMDWVVKRSGAHQQD----SLNDG------------------------ 94
Query: 573 TSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 95 -------CVRLRGLPFGCSKEEIAQFFSG 116
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 61 LVEHILEFLGEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
V+ IL F NI GVHM + +G+PSGEA+I+++SE + Q RHN ++
Sbjct: 4 FVQEILNFFTSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQDVEVGLQ-RHNEHI- 61
Query: 119 FGKKQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ V+
Sbjct: 62 ---GHRYIEVFKSKRSEMDWVVK 81
>gi|170577075|ref|XP_001893871.1| RNA binding protein [Brugia malayi]
gi|158599846|gb|EDP37285.1| RNA binding protein, putative [Brugia malayi]
Length = 519
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 318 PVHQLNQTPTVYTIPTPGNPVALCPLVQN------IWLSLLLNTIPGYEQVLGLGGVALC 371
P ++ +T T T T + P N + S + + + + L + V
Sbjct: 26 PEGEIEKTDTEQTAETTTRNKEIDPNTSNYIRLRGLPFSAKEDDVRAFLEGLEVKSVTFT 85
Query: 372 LSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQA 431
L++ GR +GE V +D+ + A + K ++ RYIE G+ +
Sbjct: 86 LTSMGRASGECYVELVDKVAAEEAKRFDKQEMNNRYIE--------------GDQDTPYN 131
Query: 432 FLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
F ++R+RG+P+ T V +FF +G E + V+D E G G+ +G+AF
Sbjct: 132 F-------VVRLRGIPFSATNNDVKEFF-SGLEVADVVIDKELG--------GRPSGEAF 175
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
V F ++ A+ AL +++ ++G RY+E+FRS+ E+++
Sbjct: 176 VRFASKQHAEMALERNRNNMGSRYVEVFRSSGDELEK 212
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY A + DFF+ N ++ + G ++P +GDA V+F EA
Sbjct: 305 IYMRGLPYSANALDIEDFFKP-----LNCVEIQLGFNEDRRP----SGDACVIFGTVGEA 355
Query: 501 DKALSKHKESIGIRYIELFRSTTAEV 526
A+S++K+ IG RYIELF T A+V
Sbjct: 356 RDAMSRNKQCIGNRYIELF--TAADV 379
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNG-VLPPT 147
G+PSGEAF++ S+ A +A L NRN + RY+EVF+ SG+++ G V+PPT
Sbjct: 168 GRPSGEAFVRFASKQHAEMA--LERNRNNM---GSRYVEVFRSSGDELEKSREGHVVPPT 222
Query: 148 SPAISPVGKTLLSPGMLP 165
S V ++ +P P
Sbjct: 223 SLRSLAVERSFPTPRTEP 240
>gi|449448717|ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
gi|449502606|ref|XP_004161690.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Cucumis sativus]
Length = 260
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 85/158 (53%), Gaps = 27/158 (17%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDF--------INVAGGN----------NNEAQAFLT 434
D AL+R++ ++ +RY+E+ ++N +++ + GG+ N+E +
Sbjct: 110 DFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAE 169
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
++R+RGLPY ++DFF+ N+ E+ + +G+ +G+AFV F
Sbjct: 170 HTG--VLRLRGLPYSAGKDDILDFFKG-----FNL--SEDSIHLTLNSEGRPSGEAFVEF 220
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+++ A+SK + ++G RYIELF S+ E+ + +++
Sbjct: 221 SNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISR 258
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++C V++FF +++D +LFV K +GK TG+ F + +
Sbjct: 59 VVRLRGLPFDCMETDVVEFFHG-----LDIVD----ILFVHK-NGKFTGEGFCVLGYPLQ 108
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL ++++++G RY+E+FRS E + + N + + G S
Sbjct: 109 VDFALQRNRQNMGRRYVEIFRSNRQEYYKAV--------ANEVFDARGG--------SPR 152
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P L + S +RLRGLPY A + FF G
Sbjct: 153 RSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKG 194
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ IL+F F N+ +H+ NS+G+PSGEAF++ +E + A + +R M G
Sbjct: 186 DDILDFFKGF--NLSEDSIHLTLNSEGRPSGEAFVEFSNEQDS--KAAMSKDR-MTLG-- 238
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F S E+++ ++
Sbjct: 239 SRYIELFPSSHEELDEAIS 257
>gi|426255652|ref|XP_004021462.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Ovis aries]
Length = 346
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASMEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASMEIAENALGKHKERIGHRYIEIFRSS 92
>gi|402589318|gb|EJW83250.1| hypothetical protein WUBG_05840 [Wuchereria bancrofti]
Length = 451
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 20/158 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR +GE V +D+ + A + K ++ RYIEV + + + N + +
Sbjct: 2 GRASGECYVELVDKAAAEEAKRFDKQEMNNRYIEVFNVTESEVVWMTRHN------VIRK 55
Query: 436 GAQ-----VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
G Q ++R+RG+P+ T V +FF +G E + V+D E G G+ +G+A
Sbjct: 56 GDQETPYNFVVRLRGIPFSATNDDVKEFF-SGLEVADVVIDKELG--------GRPSGEA 106
Query: 491 FVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
FV F ++ A+ AL +++ ++G RY+E+FRS+ E+++
Sbjct: 107 FVRFASKQHAEMALERNRNNMGSRYVEVFRSSGDELEK 144
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY A + DFF+ N ++ + G ++P +GDA V+F EA
Sbjct: 237 IYMRGLPYSANALDIEDFFKP-----LNCVEIQLGFNEDRRP----SGDACVIFGTVGEA 287
Query: 501 DKALSKHKESIGIRYIELFRSTTAEV 526
A+S++K+ IG RYIELF T A+V
Sbjct: 288 RDAMSRNKQCIGNRYIELF--TAADV 311
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNG-VLPPT 147
G+PSGEAF++ S+ A +A L NRN + RY+EVF+ SG+++ G + PPT
Sbjct: 100 GRPSGEAFVRFASKQHAEMA--LERNRNNM---GSRYVEVFRSSGDELEKSREGHIAPPT 154
Query: 148 SPAISPVGKTLLSPGMLP 165
S V ++ +P P
Sbjct: 155 SLRSLAVERSFPTPRTEP 172
>gi|343470599|emb|CCD16749.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 473
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 30/177 (16%)
Query: 372 LSAFGRRNGEAIVRFIDQEHRDMALKR--------------HKHHIDK-RYIEVTKANGE 416
S F + +AIV F++ HR R ++ HID+ RYIE++ ++ E
Sbjct: 35 FSDFNLADEDAIVFFVEGLHRGTGFIRLRNAGDAPLVIRQLNRRHIDESRYIEISYSSEE 94
Query: 417 DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
+ G ++A +++R+RGLP+ TA V F E+ MDG +
Sbjct: 95 ELQRAIGQQEQSSKA-------LVLRLRGLPFLSTADDVKAFIES--------MDGVLRI 139
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+ DG+ GDAF+ EE + + HK+ +G RYIE+ ST + + +L +
Sbjct: 140 DMCRDMDGRCAGDAFIELASEEGVARIKTLHKKMMGARYIEVLPSTLYDREAILRAS 196
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG P+ T + + +FF V +GV V + TG+AFV E +++
Sbjct: 373 VVRIRGAPFSATEEAIAEFF-------SGVRIPTQGVHMVYNEQNRLTGEAFVEVESKDD 425
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
AL K+ +G RYIE+F S+ A +Q++
Sbjct: 426 VLLALRKNGGMMGTRYIEVFESSPAAMQRL 455
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 67 EFLGEFASNIVY--QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQR 124
E + EF S + QGVHMVYN Q + +GEAF++++S+ LA LR N M+ R
Sbjct: 386 EAIAEFFSGVRIPTQGVHMVYNEQNRLTGEAFVEVESKDDVLLA--LRKNGGMM---GTR 440
Query: 125 YIEVFQCS 132
YIEVF+ S
Sbjct: 441 YIEVFESS 448
>gi|426255654|ref|XP_004021463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Ovis aries]
Length = 331
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASMEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 181 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 231
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 232 AVAAMSKDKNNMQHRYIELFLNST 255
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASMEIAENALGKHKERIGHRYIEIFRSS 92
>gi|322801457|gb|EFZ22118.1| hypothetical protein SINV_07549 [Solenopsis invicta]
Length = 425
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 41/202 (20%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV + S GR +GEA V E + A KR + H+ RYIEV KA + V
Sbjct: 41 GKNGVHMTTSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVFKAKRGEMEWVVK 100
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + + G +R+RGLP+ C+ +++ FF +G E N G+
Sbjct: 101 RSGLNLENAMDDGC---VRLRGLPFGCSKEEIAQFF-SGLEILPN------GISLPTDYT 150
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIG------------------------------- 512
G++TG+A+V F ++ A++AL KHKE IG
Sbjct: 151 GRSTGEAYVQFVNKDVAERALQKHKEKIGHSNDNNKDDDDNLFIADVSPCASLTRVSSII 210
Query: 513 IRYIELFRSTTAEVQQVLNKTM 534
RYIE+FRS+ +EV+ + M
Sbjct: 211 NRYIEIFRSSLSEVRASIGPKM 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 40/162 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ T +++ FF C++ +G+ GV +G+ +G+A+V + E+
Sbjct: 14 VVKVRGLPWSTTVDEIMKFF-----GDCSISNGKNGVHMTTSREGRPSGEAYVEMDTPED 68
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+KA + ++ +G RYIE+F++ E++ V+ ++ GL+ + M
Sbjct: 69 IEKACKRDRDHMGHRYIEVFKAKRGEMEWVVKRS--------------GLNLENAM---- 110
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
C+RLRGLP+ + FF G
Sbjct: 111 -----------------DDGCVRLRGLPFGCSKEEIAQFFSG 135
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ I++F G+ + + GVHM + +G+PSGEA+++MD+ + + +R+ +
Sbjct: 24 TTVDEIMKFFGDCSISNGKNGVHMTTSREGRPSGEAYVEMDTPED--IEKACKRDRDHM- 80
Query: 120 GKKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M V+
Sbjct: 81 --GHRYIEVFKAKRGEMEWVV 99
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLP++ T + + DFF + V + + G+ +G+A V F EEA
Sbjct: 335 IHMRGLPFKATEQDIADFFRPIEPVN---------VRIILENGGRPSGEADVEFATHEEA 385
Query: 501 DKALSKHKESIGIRYIELF 519
KA+ K K + RYIELF
Sbjct: 386 LKAMCKDKSHMSHRYIELF 404
>gi|239052941|ref|NP_001131830.2| uncharacterized protein LOC100193205 [Zea mays]
gi|223943183|gb|ACN25675.1| unknown [Zea mays]
gi|238908614|gb|ACF80415.2| unknown [Zea mays]
Length = 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + ++ ++ F +
Sbjct: 68 GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKLEYYRAIANEVSQGGYFESE 127
Query: 436 GAQV---------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+ ++++RGLPY T + +I FF EE
Sbjct: 128 YRRSSPPLSPPKKPAEDKGSMEYTEVLKLRGLPYSATTEDIIKFF-------LEYELTEE 180
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
V DGKATG+AFV F E A + K K +IG RY+ELF ST EV + +
Sbjct: 181 NVHIAISSDGKATGEAFVEFPTTEVAKTVMCKDKMTIGTRYVELFPSTPEEVSRARTR 238
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 425 NNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
N+N A A + G Q +R+RGLP++C + FF +++D L V K
Sbjct: 17 NSNLAGAGASTGIQNFPGVRLRGLPFDCNDIDICKFFVG-----LDIVD----CLLVNK- 66
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
+G+ TG+AFV+F + + AL ++++++G RY+E+FR E + + E+ +
Sbjct: 67 NGRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKLEYYRAIAN--EVSQGGYF 124
Query: 543 TSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
S S A+ S + ++LRGLPY A + FF+
Sbjct: 125 ESEYRRSSPPLSPPKKPAEDK---------GSMEYTEVLKLRGLPYSATTEDIIKFFL 173
>gi|25144421|ref|NP_740878.1| Protein HRPF-1, isoform b [Caenorhabditis elegans]
gi|351061233|emb|CCD68996.1| Protein HRPF-1, isoform b [Caenorhabditis elegans]
Length = 362
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 28/184 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG---EDFINVAGGNNNEAQAF 432
GR +G+A V F ++E + ALK+ + H+ RYIEV A G G+ + +
Sbjct: 40 GRTSGDAKVVFTNEEDYNNALKKDREHLGSRYIEVFPAGGAPTRRGDRGERGDRGDRDHY 99
Query: 433 LTRGA-----------------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
+RGA I+R+RGLP+ T++ + DF + +G
Sbjct: 100 RSRGAPPRDRYSDRGGPRSSGPDSIVRLRGLPFSVTSRDISDFL-------APLPIVRDG 152
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-M 534
+L + + G+A+V FE E A +H ++IG RYIE+F +T ++ + + +
Sbjct: 153 ILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVFEATHRDLSRFAEENDL 212
Query: 535 ELPK 538
+P+
Sbjct: 213 RVPR 216
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 34/166 (20%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV--LFVKKPDGKATGDAFVLFEKEE 498
++ RGLP+E T +++ DFF G G+ L + + +G+ +GDA V+F EE
Sbjct: 7 VQCRGLPWEATEQELRDFF------------GNNGIESLEIPRRNGRTSGDAKVVFTNEE 54
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+ + AL K +E +G RYIE+F + A ++ + G + H
Sbjct: 55 DYNNALKKDREHLGSRYIEVFPAGGAPTRR----------------GDRGERGDRGDRDH 98
Query: 559 LAQVPVPYLPQHIITSGTR----KDCIRLRGLPYEALCILMDIFFV 600
P ++ G R +RLRGLP+ + F
Sbjct: 99 YRSRGAPPRDRYSDRGGPRSSGPDSIVRLRGLPFSVTSRDISDFLA 144
>gi|327271497|ref|XP_003220524.1| PREDICTED: RNA-binding protein 12-like [Anolis carolinensis]
Length = 1418
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 332 PTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEH 391
P P NP L + + S + + + L + V + GR NG V+F
Sbjct: 293 PLPINPDDLYVSIHGMPFSATESDVKDFFHGLRVDAVHILKDHVGRNNGNGFVKFCSPPD 352
Query: 392 RDMALKRHKHHIDKRYIEVTKANGEDFINVAG-----------GNNNEAQAFLTRGAQ-- 438
ALKR++ + +RY+EV+ A ++ G G N+ + L+
Sbjct: 353 TFEALKRNRMLMIQRYVEVSPATERQWVTAGGHITFKQTMGPSGQNHPSPQTLSMSKSPN 412
Query: 439 --------------VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
+ ++GLP+E K VIDFF+ +++ E+ + P+G
Sbjct: 413 GQKRSRSRSPHDQGFCVYLKGLPFESENKHVIDFFK-----KLDIV--EDSIYIAYGPNG 465
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
KA G+ FV F E + AL HK+ IG R+I++
Sbjct: 466 KALGEGFVEFRNEADYKAALCHHKQYIGNRFIQV 499
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
G+ GE V F ++ AL HK +I R+I+V + + Q+F
Sbjct: 465 GKALGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIEMIRKRLQSFNYD 524
Query: 436 GAQVII-------------RMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVK 480
+++I R+ +PY T ++I F E A ENS ++
Sbjct: 525 QREIMINTEGEMGPPKLCARISNIPYNITKMEIIQFLEGLAVDENSIQIL---------V 575
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V + EE+A K+ H++ + R + L + E++++
Sbjct: 576 DTNGQGLGQALVQLKTEEDARKSERLHRKKLNGRDVVLRLISFEEMKEI 624
>gi|395501374|ref|XP_003755070.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 [Sarcophilus
harrisii]
Length = 342
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF G E N G+ G++TG+AFV F +E A
Sbjct: 19 VRLRGLPFGCSKEEIVQFF-TGLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 71
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 72 ENALGKHKERIGHRYIEIFKSSRSEIK 98
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 197 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 247
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RYIELF ++ A
Sbjct: 248 ALAAMSKDKNNMQHRYIELFLNSVA 272
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 46 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 93
>gi|149602744|ref|XP_001512376.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Ornithorhynchus anatinus]
Length = 332
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF G E N G+ G++TG+AFV F +E A
Sbjct: 19 VRLRGLPFGCSKEEIVQFF-TGLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 71
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+ AL KHKE IG RYIE+F+S+ +E++ +
Sbjct: 72 ENALGKHKERIGHRYIEIFKSSRSEIKGFYD 102
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 182 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 232
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RYIELF ++TA
Sbjct: 233 AVAAMSKDKNNMQHRYIELFLNSTA 257
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 323 NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEA 382
N T + T+ G P C + + L +P G+ L + GR GEA
Sbjct: 11 NDTASDGTVRLRGLPFG-CSKEEIVQFFTGLEIVPN--------GITLTMDYQGRSTGEA 61
Query: 383 IVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
V+F +E + AL +HK I RYIE+ K++
Sbjct: 62 FVQFASKEIAENALGKHKERIGHRYIEIFKSS 93
>gi|46195836|ref|NP_996869.1| RNA-binding protein 12 [Gallus gallus]
gi|37932175|gb|AAP69823.1| SWAN ribonucleoprotein [Gallus gallus]
Length = 887
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 54/263 (20%)
Query: 285 INMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLV 344
+NMN+ L P+ F P PV P Q+N +V IP NP L +
Sbjct: 266 VNMNSG--LNPL-----FIGPMNPVNPI--------QMNSQSSVKPIPI--NPDDLYVSI 308
Query: 345 QNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHID 404
+ S + + + L + + + GR NG +V+F + ALKR++ +
Sbjct: 309 HGMPFSATESDVKEFFLGLRVDAIHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMI 368
Query: 405 KRYIEVTKANGEDFINVAGGNNNEAQA---------------FLTRGAQ----------- 438
+RY+EV+ A ++ AGG+ Q F ++
Sbjct: 369 QRYVEVSPATERQWV-AAGGHITFKQTMGPSGQPHPPPPQPHFRSKSPSGQKRSRSRSPH 427
Query: 439 ---VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
+ ++GLP+E K VIDFF+ +++ E+ + P+GKA G+ FV F
Sbjct: 428 EQGFCVYLKGLPFESENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKAIGEGFVEFR 480
Query: 496 KEEEADKALSKHKESIGIRYIEL 518
E + AL HK+ IG R+I++
Sbjct: 481 NEADYKAALCHHKQYIGNRFIQV 503
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----TKANGE--DFINVAGGNNNEA 429
G+ GE V F ++ AL HK +I R+I+V KA E D I N N
Sbjct: 469 GKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDLIRKRLQNFNYD 528
Query: 430 QAFLTRGAQ-------VIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVK 480
Q + A+ + + +PY T +++ F E A ENS ++
Sbjct: 529 QREIIMNAEAESGSPKLCAHISNIPYNITKMEILQFLEGLAVEENSVQIL---------V 579
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A KA H++ + R + L T E++ +
Sbjct: 580 DNNGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVVLRLITVEEMRDI 628
>gi|268565477|ref|XP_002639457.1| C. briggsae CBR-HRPF-1 protein [Caenorhabditis briggsae]
Length = 556
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV--------TKANGEDFINVAGGNNN 427
GR +G+A V F +++ ALK+ + H+ RYIEV + + DF GG
Sbjct: 40 GRTSGDATVTFTNEDDYRQALKKDREHLGSRYIEVFPMDEPPRRRGDRNDFRPRGGGPPR 99
Query: 428 EAQAFLTRGA--------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
+ F RG+ I+R+RGLP+ T + + DF ++ +G+L
Sbjct: 100 DR--FSDRGSGQRTGPSTDPIVRLRGLPFSVTIRDINDFLAP-----LPIV--RDGILLP 150
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-MELPK 538
+ + G+A+V+F+ E A +H ++IG RYIE+F +T E+ + + + +P+
Sbjct: 151 DQQRARIAGEAYVVFDSLESVQIAKQRHMKNIGHRYIEVFEATQRELSRFADDNGLRVPR 210
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP--DGKATGDAFVLFEKEE 498
++ RGLP+E T + + DFF G G+ + P +G+ +GDA V F E+
Sbjct: 7 VQCRGLPWEATEQDLRDFF------------GNNGIASLDIPIRNGRTSGDATVTFTNED 54
Query: 499 EADKALSKHKESIGIRYIELF 519
+ +AL K +E +G RYIE+F
Sbjct: 55 DYRQALKKDREHLGSRYIEVF 75
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRG+P+ T V +FF N ++ + ++P +GDA V+F ++
Sbjct: 479 VLRMRGVPFRATETDVYEFFHPIRPNQVELIRDSQ----YQRP----SGDARVIFYSRKD 530
Query: 500 ADKALSKHKESIGIRYIEL 518
D AL K K+ +G RYIE+
Sbjct: 531 YDDALMKDKQYMGERYIEM 549
>gi|390475715|ref|XP_003735008.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Callithrix jacchus]
Length = 421
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ + G++TG+AFV F +E
Sbjct: 108 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLMMDYQGRSTGEAFVQFASKEIT 160
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ E++
Sbjct: 161 ENALGKHKERIGHRYIEIFRSSRNEIE 187
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 271 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 321
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ +YIELF ++T
Sbjct: 322 AVAAMSKDKNNMQHQYIELFLNST 345
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 135 GITLMMDYQGRSTGEAFVQFASKEITENALGKHKERIGHRYIEIFRSS 182
>gi|25144418|ref|NP_740877.1| Protein HRPF-1, isoform a [Caenorhabditis elegans]
gi|351061232|emb|CCD68995.1| Protein HRPF-1, isoform a [Caenorhabditis elegans]
Length = 549
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 28/184 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG---EDFINVAGGNNNEAQAF 432
GR +G+A V F ++E + ALK+ + H+ RYIEV A G G+ + +
Sbjct: 40 GRTSGDAKVVFTNEEDYNNALKKDREHLGSRYIEVFPAGGAPTRRGDRGERGDRGDRDHY 99
Query: 433 LTRGA-----------------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
+RGA I+R+RGLP+ T++ + DF + +G
Sbjct: 100 RSRGAPPRDRYSDRGGPRSSGPDSIVRLRGLPFSVTSRDISDFL-------APLPIVRDG 152
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-M 534
+L + + G+A+V FE E A +H ++IG RYIE+F +T ++ + + +
Sbjct: 153 ILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVFEATHRDLSRFAEENDL 212
Query: 535 ELPK 538
+P+
Sbjct: 213 RVPR 216
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 34/166 (20%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV--LFVKKPDGKATGDAFVLFEKEE 498
++ RGLP+E T +++ DFF G G+ L + + +G+ +GDA V+F EE
Sbjct: 7 VQCRGLPWEATEQELRDFF------------GNNGIESLEIPRRNGRTSGDAKVVFTNEE 54
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+ + AL K +E +G RYIE+F + A ++ + G + H
Sbjct: 55 DYNNALKKDREHLGSRYIEVFPAGGAPTRR----------------GDRGERGDRGDRDH 98
Query: 559 LAQVPVPYLPQHIITSGTR----KDCIRLRGLPYEALCILMDIFFV 600
P ++ G R +RLRGLP+ + F
Sbjct: 99 YRSRGAPPRDRYSDRGGPRSSGPDSIVRLRGLPFSVTSRDISDFLA 144
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRG+P+ + V DFF N ++ + ++P +GDA V+F ++
Sbjct: 472 VLRMRGVPFRASEADVYDFFHPIRPNQVELLRDHQ----FQRP----SGDARVIFYNRKD 523
Query: 500 ADKALSKHKESIGIRYIEL 518
D AL K K+ +G RYIE+
Sbjct: 524 YDDALMKDKQYMGERYIEM 542
>gi|24646109|ref|NP_731640.1| glorund, isoform C [Drosophila melanogaster]
gi|23171055|gb|AAN13533.1| glorund, isoform C [Drosophila melanogaster]
Length = 179
Score = 72.8 bits (177), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 15/131 (11%)
Query: 412 KANGEDFINVAGGNNNEAQAFLTRGAQVI---------IRMRGLPYECTAKQVIDFFEAG 462
+ NG++F + + +E + G I +R+RGLP+ T K+++DF E
Sbjct: 13 QGNGDNFNDDSNQQQDEDDQYNEDGGGKIENVGESPKFVRLRGLPWSATHKEILDFLE-- 70
Query: 463 TENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
+ NV +G G+ L + DGK TG+A+V +E+ ++A +K S+G RYIE+F +
Sbjct: 71 ---NVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTA 127
Query: 522 TTAEVQQVLNK 532
T E ++ + K
Sbjct: 128 TPKEAKEAMRK 138
Score = 46.6 bits (109), Expect = 0.035, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A ++
Sbjct: 77 GSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKE----- 131
Query: 423 GGNNNEAQAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEA 461
EA ++ G ++++RGLPY T +Q+ +FF
Sbjct: 132 ---AKEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFFSG 168
>gi|363741413|ref|XP_003642489.1| PREDICTED: RNA-binding protein 12-like [Gallus gallus]
Length = 880
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 52/262 (19%)
Query: 285 INMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLV 344
+NMN+ L P+ F P PV P Q+N +V IP NP L +
Sbjct: 266 VNMNSG--LNPL-----FIGPMNPVNPI--------QMNSQSSVKPIPI--NPDDLYVSI 308
Query: 345 QNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHID 404
+ S + + + L + + + GR NG +V+F + ALKR++ +
Sbjct: 309 HGMPFSATESDVKEFFLGLRVDAIHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMI 368
Query: 405 KRYIEVTKANGEDFINVAG----------------------------GNNNEAQAFLTRG 436
+RY+EV+ A ++ G +++
Sbjct: 369 QRYVEVSPATERQWVAAGGHITFKQTMGPSGQPHPPPPQPHSRSKSPSGQKRSRSRSPHE 428
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ ++GLP+E K VIDFF+ +++ E+ + P+GKA G+ FV F
Sbjct: 429 QGFCVYLKGLPFESENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKAIGEGFVEFRN 481
Query: 497 EEEADKALSKHKESIGIRYIEL 518
E + AL HK+ IG R+I++
Sbjct: 482 EADYKAALCHHKQYIGNRFIQV 503
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----TKANGE--DFINVAGGNNNEA 429
G+ GE V F ++ AL HK +I R+I+V KA E D I N N
Sbjct: 469 GKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDLIRKRLQNFNYD 528
Query: 430 QAFLTRGAQ-------VIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVK 480
Q + A+ + + +PY T +++ F E A ENS ++
Sbjct: 529 QREIIMNAEAESGSPKLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDN------- 581
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A KA H++ + R + L T E++ +
Sbjct: 582 --NGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVVLRLITVEEMRDI 628
>gi|255544880|ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
gi|223547409|gb|EEF48904.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
Length = 260
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 81/155 (52%), Gaps = 22/155 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGA--------------- 437
D AL++++ ++ +RY+EV ++ +D+ ++A+ R A
Sbjct: 111 DFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEH 170
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++R+RGLP+ +++FF+ + + E+ V +G+ TG+AFV F
Sbjct: 171 TGVLRLRGLPFSAGKDDIMEFFK-------DFVLSEDSVHITMNSEGRPTGEAFVEFASA 223
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A++K + ++G RYIELF S+ E+++ + +
Sbjct: 224 EDSKAAMAKDRMTLGSRYIELFPSSIEELEEAVTR 258
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 31/172 (18%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK TG+AF + +
Sbjct: 60 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHK-GGKFTGEAFCVLGCPLQ 109
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL K+++++G RY+E+FRS + + + N ++ + G + P
Sbjct: 110 VDFALQKNRQNMGRRYVEVFRSKRQDYYKAI--------ANEVSDARGGSPRRAPRAKSY 161
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA-LCILMDIF--FVGQQDSFVH 608
+ S +RLRGLP+ A +M+ F FV +DS VH
Sbjct: 162 DEGK---------DSAEHTGVLRLRGLPFSAGKDDIMEFFKDFVLSEDS-VH 203
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ I+EF +F + VH+ NS+G+P+GEAF++ S + A + +R M G
Sbjct: 186 DDIMEFFKDFV--LSEDSVHITMNSEGRPTGEAFVEFASAEDS--KAAMAKDR-MTLG-- 238
Query: 123 QRYIEVFQCSGEDMN 137
RYIE+F S E++
Sbjct: 239 SRYIELFPSSIEELE 253
>gi|442746051|gb|JAA65185.1| Putative splicing factor hnrnp-f, partial [Ixodes ricinus]
Length = 141
Score = 72.4 bits (176), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 38/149 (25%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ T +++++FF T N+ G GV +G+ +G+A++ E E++
Sbjct: 7 VLRIRGLPWSPTKEEILNFF---TSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQD 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ L +H E IG RYIE+F+S +E+ V+ ++ ++ S N+G
Sbjct: 64 VEVGLQRHNEHIGHRYIEVFKSKRSEMDWVVKRSGAHQQD----SLNDG----------- 108
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
C+RLRGLP+
Sbjct: 109 --------------------CVRLRGLPF 117
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + LS GR +GEA + ++ ++ L+RH HI RYIEV K+ + V
Sbjct: 36 GISGVHMTLSREGRPSGEAYIELESEQDVEVGLQRHNEHIGHRYIEVFKSKRSEMDWVVK 95
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
+ Q L G +R+RGLP+ C+ +++ FF
Sbjct: 96 RSGAHQQDSLNDGC---VRLRGLPFGCSKEEIAQFFSG 130
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 63 EHILEFLGEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
E IL F NI GVHM + +G+PSGEA+I+++SE + Q RHN ++
Sbjct: 20 EEILNFFTSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQDVEVGLQ-RHNEHI--- 75
Query: 121 KKQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ V+
Sbjct: 76 -GHRYIEVFKSKRSEMDWVV 94
>gi|168066869|ref|XP_001785353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663050|gb|EDQ49838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 335 GNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAF-GRRNGEAIVRFIDQEHRD 393
G+P +L P+V+ L + ++ GL V + L GR +GEA V F D
Sbjct: 22 GHPRSL-PVVRLRGLPFNCSDSDVFDFFAGLDVVDVLLVRMNGRFSGEAYVVFGAPVQVD 80
Query: 394 MALKRHKHHIDKRYIEVTKANGEDFINVAGG----------------------------- 424
AL++++H+I +RYIEV + +D+ +
Sbjct: 81 YALQKNRHNIGRRYIEVFRCKKQDYYHAVAAEVADTRCIDSTLPLHVLNNNSSSASAKAP 140
Query: 425 --NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
NN + T ++++RGLP+ T V+DFF + +E V +
Sbjct: 141 SRNNTKDHLNFTG----VVKLRGLPFSATKSDVMDFFREFELH-------DEHVHIMLHS 189
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
DG+ TG+AFV F +A A++K K ++G RY+E+F S+ E + +
Sbjct: 190 DGRTTGEAFVDFGSASKAKSAMNKDKMTMGSRYVEIFPSSREEATRAATR 239
>gi|357460387|ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
gi|355489523|gb|AES70726.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
Length = 259
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%), Gaps = 23/156 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQ-------------- 438
D AL+R++ +I +RY+EV ++ +++ ++A+ R +
Sbjct: 109 DFALQRNRQNIGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSAPRAKSYDEGKDSAE 168
Query: 439 --VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++R+RGLP+ ++DFF+ + E+ + V +G+ +G+A+V FE
Sbjct: 169 HTGVLRLRGLPFSANKDDIMDFFK-------EYVLSEDSIHIVMNSEGRPSGEAYVEFEN 221
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+++ A++K + ++G RYIELF ST E++ +++
Sbjct: 222 ADDSKAAMAKDRMTLGSRYIELFPSTHGEMEDAISR 257
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK +G+ F + +
Sbjct: 58 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHKG-GKFSGEGFCVLGYPLQ 107
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +++++IG RY+E+FRS E + + N ++ + G P S
Sbjct: 108 VDFALQRNRQNIGRRYVEVFRSKRQEYYKAI--------ANEVSDARGG----SPRRS-- 153
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA-LCILMDIF--FVGQQDS 605
P S +RLRGLP+ A +MD F +V +DS
Sbjct: 154 --APRAKSYDEGKDSAEHTGVLRLRGLPFSANKDDIMDFFKEYVLSEDS 200
>gi|326918872|ref|XP_003205709.1| PREDICTED: g-rich sequence factor 1-like, partial [Meleagris
gallopavo]
Length = 343
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 27/235 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ GRR G+A++ + AL+++ ++ RY++V + + +D +
Sbjct: 51 GENGIHFLLNRDGRRRGDALIELESKADVQKALEKNLRYMGTRYVKVHEIHDKDVDGLLQ 110
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
E+Q + ++ +RGLP++ T + DFF AG + D + FV + +
Sbjct: 111 SLRYESQVM----SDGVVLLRGLPFDSTEDDIADFF-AG----LRITD----ITFVYRGE 157
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK-NNSL 542
K TG+A+V F E KAL +HKE + RYIE++ ST E+Q+ L+ E+ + L
Sbjct: 158 RK-TGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRKEMIRLRREL 216
Query: 543 TSS--------NNGLSA--QQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLP 587
S+ G SA ++ + S A+ P I S R + +RG P
Sbjct: 217 GSTAEERESDYTRGSSAEREKEVASEAAESSGPSSQTGSILSSLR--AVHVRGFP 269
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR G P+ CT K+++ FF +SC + +GE G+ F+ DG+ GDA + E + +
Sbjct: 24 LIRAHGFPFACTKKEMMAFF-----DSCKIRNGENGIHFLLNRDGRRRGDALIELESKAD 78
Query: 500 ADKALSKHKESIGIRYIEL 518
KAL K+ +G RY+++
Sbjct: 79 VQKALEKNLRYMGTRYVKV 97
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 50/184 (27%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA----------G 423
R+ GEA V+F E AL RHK +++ RYIEV TK + +++ G
Sbjct: 158 RKTGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRKEMIRLRRELG 217
Query: 424 GNNNEAQAFLTRGAQV----------------------------IIRMRGLPYECTAKQV 455
E ++ TRG+ + +RG P + +A+ +
Sbjct: 218 STAEERESDYTRGSSAEREKEVASEAAESSGPSSQTGSILSSLRAVHVRGFPTQVSAQDI 277
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRY 515
IDFF +L DG ATG+A V FE ++A A++K + +
Sbjct: 278 IDFFAPLRPRR---------ILIEYNSDGVATGEADVHFESYDDAVTAMAKERAQLQFGA 328
Query: 516 IELF 519
+E+F
Sbjct: 329 VEVF 332
>gi|303278009|ref|XP_003058298.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460955|gb|EEH58249.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 230
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
L + GR GEA V +Q ++AL++++ + +RYIEV ++ +D+ + NE
Sbjct: 54 LIVRRDGRATGEAYVVLANQMLMEVALQKNRGPMGRRYIEVFRSKKQDYYHAVSIAVNEP 113
Query: 430 QAFLTRGAQV--------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
G Q ++++RGLP+ T +I FF+ + ++ +
Sbjct: 114 DYGNGNGGQGGGYYDNGPLAEHTGVLKLRGLPFSATKDDIITFFDDKSLGVSPLV--HDS 171
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+ V DG+ +G AFV F E+A A+ K + S+G RY+ELF S+ E +
Sbjct: 172 IHIVLSVDGRPSGVAFVEFVSAEDAKTAMIKDRSSMGTRYVELFPSSREEATR 224
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ + V +FF+ +D VL V++ DG+ATG+A+V+ +
Sbjct: 26 VVRLRGLPFNASEYDVQEFFQG-----LEPVD----VLIVRR-DGRATGEAYVVLANQML 75
Query: 500 ADKALSKHKESIGIRYIELFRS 521
+ AL K++ +G RYIE+FRS
Sbjct: 76 MEVALQKNRGPMGRRYIEVFRS 97
>gi|47211266|emb|CAF91568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 823
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 40/208 (19%)
Query: 344 VQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
+QN+ + I + + LG+ GV A GR G+A V+F + A+KR +
Sbjct: 232 LQNLPFTCTEMDIRHFFRGLGVDGVRFLKDAQGRHTGKASVKFFSPQESFEAVKRGGGMM 291
Query: 404 DKRYIEVTKANGEDFINVA--------------------------GGNNNEAQAFLTRGA 437
+R+IE++ + + + +++ NN A+ RG
Sbjct: 292 GQRFIEISPGSEQQWASISISDSTASQASHASNKPSVESQPPQQHCRNNAGAEGRDQRGR 351
Query: 438 -------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
+ + ++GLPYE KQ+ +FF N+ E+ + P+G+ATG+
Sbjct: 352 SRSPHRQEFCVYLKGLPYEADKKQIKEFF-------SNLAIIEDSIYIAYGPNGRATGEG 404
Query: 491 FVLFEKEEEADKALSKHKESIGIRYIEL 518
F+ F+ E++ AL H + +G R+I++
Sbjct: 405 FLEFKTEQDHKAALGAHMQYMGSRFIQV 432
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++ + ++ LP+ CT + FF G +GV F+K G+ TG A V F
Sbjct: 227 ELFVHLQNLPFTCTEMDIRHFFRG---------LGVDGVRFLKDAQGRHTGKASVKFFSP 277
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
+E+ +A+ + +G R+IE+ S +E Q + + + +SN QP
Sbjct: 278 QESFEAVKRGGGMMGQRFIEI--SPGSEQQWASISISDSTASQASHASNKPSVESQPPQQ 335
Query: 558 HLAQVPVPYLPQHIITSGT--RKD-CIRLRGLPYEALCILMDIFF 599
H S + R++ C+ L+GLPYEA + FF
Sbjct: 336 HCRNNAGAEGRDQRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFF 380
>gi|422294428|gb|EKU21728.1| rna binding protein, partial [Nannochloropsis gaditana CCMP526]
Length = 572
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYI----------EVTKANGEDFINV------- 421
+GEA+VR E + ALK + KR++ E T A E+ +N
Sbjct: 131 SGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPD 190
Query: 422 -------AG-GNNNEAQAFL---TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
AG G EA + + Q ++RMRGLPY T K ++ FF + V
Sbjct: 191 AATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFF-----SGFGVA 245
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
+G GV G+A+G A+V+FE EA AL KE IG R+I+LF S+ E+
Sbjct: 246 EG--GVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEM 299
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 22/159 (13%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGGNNNEAQAFLT 434
GR +GEA V QE AL + K + R++++ +++ GE F V A +T
Sbjct: 323 GRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGA-------AAVT 375
Query: 435 RGAQ------VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
GA+ +++MRGLP++ T V +F S V GV DG+ TG
Sbjct: 376 LGAKDDVGYAGVLKMRGLPFQTTVPDVATWF-----GSYRVA--PHGVFITMGADGRPTG 428
Query: 489 DAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+A+V+FE E+A A +K+++ R+I+L+ ++ +V
Sbjct: 429 EAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDV 467
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
G+ FV + DG+++G+AFV+ +E +AL + K+ +G R++++F S E+
Sbjct: 314 GIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGEL 365
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 28/172 (16%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+R+ GLP++C+ V +F + V + +K D ++G+A V E
Sbjct: 89 LILRLSGLPWKCSVADVQNFLK-----HIGVSTRPDPAADIKILD-DSSGEALVRVGSAE 142
Query: 499 EADKALSKHKESIGIRYI-------ELFRSTTAEVQQVLNK-TMELPKNNSLTS-SNNGL 549
E + AL +G R++ E F +T A ++ +N +P + T + +G
Sbjct: 143 EEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGT 202
Query: 550 SAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
+ + L+ VP PQ + +R+RGLPY A + FF G
Sbjct: 203 AGEASSLT----VPESSTPQGV---------VRMRGLPYSATEKDILAFFSG 241
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 30/168 (17%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVA--- 422
GV + + A GR GEA V F E A + +K ++ R+I++ A+ D
Sbjct: 415 GVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHS 474
Query: 423 -------GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
GG A +T R+RG+P T +++ FF V+ G
Sbjct: 475 PIVGQAHGGCPVYANTPMT-----CARLRGVPSTVTEEELFRFFAG-----LQVI----G 520
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKE-----SIGIRYIEL 518
+ + G+ATG+A+ F ++ +A+S++++ +G R IE+
Sbjct: 521 LYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEV 568
>gi|90018164|gb|ABD83895.1| hypothetical protein [Ictalurus punctatus]
Length = 157
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ +V FF + C V + + +G+ +G+AFV E E+E
Sbjct: 8 VVRVRGLPWSCSVDEVARFF-----SDCKVANNGTSIHLTYTREGRPSGEAFVELESEDE 62
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL K +E++G RY+E+F+S E+ VL T
Sbjct: 63 LKIALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 96
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---INVAGGNNNEAQAF 432
GR +GEA V ++ +ALK+ + + RY+EV K+N + + G N E +
Sbjct: 47 GRPSGEAFVELESEDELKIALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNGPETE-- 104
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
++R+RGLP+ C+ ++++ FF
Sbjct: 105 ----GDGLVRLRGLPFGCSKEEIVRFFSG 129
Score = 48.5 bits (114), Expect = 0.009, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 81 VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL 140
+H+ Y +G+PSGEAF++++SE +A L+ +R + RY+EVF+ + +M+ VL
Sbjct: 39 IHLTYTREGRPSGEAFVELESEDELKIA--LKKDRETM---GHRYVEVFKSNNVEMDWVL 93
Query: 141 NGVLP 145
P
Sbjct: 94 KHTGP 98
>gi|290977130|ref|XP_002671291.1| predicted protein [Naegleria gruberi]
gi|284084859|gb|EFC38547.1| predicted protein [Naegleria gruberi]
Length = 666
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 29/179 (16%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDF------- 418
+ L L+ FG+ GEA VRF +E + A K K ++ RYIE+ K+ E+
Sbjct: 192 DIILMLNYFGKSTGEAYVRFESEEELEKARKTMDKKNLGSRYIEIFKSTIEEMEHSRRVL 251
Query: 419 -INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE--- 474
N+ NN++ I++MR +P+ T ++ FF T + + E
Sbjct: 252 ERNLKNLNNSK-----------ILKMRNVPFSATEDEIETFFSGLTIATVQSRNQAEQSN 300
Query: 475 -----GVLFVKKP-DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
V FV P +GK TG+ FV F ++ +A ++KE I RYIELF S+ +E++
Sbjct: 301 ETRRRKVYFVLNPMNGKRTGEVFVEFTCHDQMLQAAKRNKEKIRNRYIELFHSSISELR 359
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK--PDGKATGDAFVLFEKEE 498
++MRGLP+ T K++ +FF AG D EE + K + TG ++ F +
Sbjct: 587 LKMRGLPFSSTEKEIAEFF-AG-------YDFEEDSIRFKMDFKRNRQTGICYIRFRTKT 638
Query: 499 EADKALS-KHKESIGIRYIELF 519
EA++A + +++ +IG RYIELF
Sbjct: 639 EAERAANERNRCNIGDRYIELF 660
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 38/160 (23%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI---------------- 419
G+R GE V F + A KR+K I RYIE+ ++ +
Sbjct: 316 GKRTGEVFVEFTCHDQMLQAAKRNKEKIRNRYIELFHSSISELRASQYYIQQQQQQNYFP 375
Query: 420 -------NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
++G N R + I+++ GLP ++ + F +
Sbjct: 376 YQHITRPRISGVQN--------RKSNFIVKIEGLPTSFEENEIAELFNG-------LSLS 420
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
E G+ + D +TG+AFV F EE KAL ++ +I
Sbjct: 421 EAGIHLIFGEDECSTGEAFVEFVNEESFAKALEQNDTTIS 460
>gi|149052455|gb|EDM04272.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_a [Rattus
norvegicus]
Length = 96
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIE 517
E+E AL K +E++G RY+E
Sbjct: 63 SEDEVKLALKKDRETMGHRYVE 84
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIE 127
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+E
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVE 84
>gi|324509132|gb|ADY43846.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 192
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV-TKANGEDFINVAGG-- 424
+ L++ GR +GE V D ALK ++ I+ RYIEV T + GE + V G
Sbjct: 34 ITFTLTSSGRASGECYVELNDNSAVKEALKLDRNEINGRYIEVFTVSEGELAMMVRHGVI 93
Query: 425 -NNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ E+++ + ++R+RGLPY + +FF+ G + + V+D E+G
Sbjct: 94 RGSGESES--RYASNYVVRLRGLPYSANVDDIKEFFK-GLDVADVVIDKEQG-------- 142
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRY 515
G+ +G+AFV +E A+ AL + K ++G RY
Sbjct: 143 GRPSGEAFVRLASKEHAELALERSKNNMGSRY 174
Score = 43.1 bits (100), Expect = 0.44, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 39/161 (24%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLP+ V +F + T S + F G+A+G+ +V
Sbjct: 8 IRLRGLPFAAKESDVRNFLQGITAKS---------ITFTLTSSGRASGECYVELNDNSAV 58
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+AL + I RYIE+F + E+ ++ ++ + S S
Sbjct: 59 KEALKLDRNEINGRYIEVFTVSEGELAMMV-------RHGVIRGSGESESR--------- 102
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
Y ++ +RLRGLPY A + FF G
Sbjct: 103 -----YASNYV---------VRLRGLPYSANVDDIKEFFKG 129
>gi|388499278|gb|AFK37705.1| unknown [Medicago truncatula]
Length = 94
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I++MRGLP+ T Q+IDFF+ +++G V +PDGK TG+A+V F +E
Sbjct: 6 ILKMRGLPFLVTKSQIIDFFK-----DYKLIEGR--VHIACRPDGKVTGEAYVEFVSPDE 58
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
A +A+ K K +IG RY+ELF T E ++ +++ +
Sbjct: 59 AKRAMFKDKMTIGSRYVELFPFTPDEARRAESRSRQ 94
>gi|76155549|gb|AAX26841.2| SJCHGC06966 protein [Schistosoma japonicum]
Length = 106
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEA--------GTENSCNVMDGEEGVLFVKKPDGKAT 487
G ++R+RGLP+ A +I+FF+ C + G+ G+ F + P+G++
Sbjct: 5 GMSFVVRIRGLPFSANADDIINFFKGTLVFRVFFNVSTDCTIRGGKRGIYFPQGPNGRSN 64
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIE 517
G+AF+ + +++ +KA++ H E +G RYIE
Sbjct: 65 GEAFIELDSKDDKEKAMAHHNEHMGRRYIE 94
>gi|224104153|ref|XP_002313339.1| predicted protein [Populus trichocarpa]
gi|222849747|gb|EEE87294.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 80/155 (51%), Gaps = 22/155 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGA--------------- 437
D AL++++ ++ +RY+EV ++ +D+ +E++ R
Sbjct: 104 DFALQKNRQNMGRRYVEVFRSKRQDYYKTIANEVSESRGSPRRNIPRAKSYDEGKDSAEH 163
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++R+RGLP+ + +++FF+ + + E+ + +G+ TG+AFV F
Sbjct: 164 TGVLRLRGLPFSASKDDIMEFFK-------DFVLSEDSIHITMNSEGRPTGEAFVEFANA 216
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A++K + ++G RYIELF S+ E + +++
Sbjct: 217 EDSKAAMAKDRMTLGSRYIELFPSSVEESDEAVSR 251
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 30/169 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK +G+AF + +
Sbjct: 53 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHK-GGKFSGEAFCVLGYPLQ 102
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL K+++++G RY+E+FRS +Q KT+ N ++ S S
Sbjct: 103 VDFALQKNRQNMGRRYVEVFRSK----RQDYYKTIA----NEVSESRG---------SPR 145
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA-LCILMDIF--FVGQQDS 605
+P S +RLRGLP+ A +M+ F FV +DS
Sbjct: 146 RNIPRAKSYDEGKDSAEHTGVLRLRGLPFSASKDDIMEFFKDFVLSEDS 194
>gi|25153681|ref|NP_741422.1| Protein HRPF-2 [Caenorhabditis elegans]
gi|351059337|emb|CCD74180.1| Protein HRPF-2 [Caenorhabditis elegans]
Length = 610
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV--TKANGEDFINVAGGNNN 427
+C + GR NGEA V F + E A++ + I RYIEV +A+ +F ++N
Sbjct: 95 VCTT--GRPNGEAYVEFKNTEEAGKAMENDRKEISNRYIEVFTVEADEAEFEFRPDPDSN 152
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
+IR+RG+P+ C V FFE ++ G G P + +
Sbjct: 153 GE-------VNHVIRLRGVPWSCKEDDVRKFFEGLEPPPAEIVIGGTG-----GPRSRPS 200
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
G+AFV F ++ A+KA+ + +G RY+E+F S+ E +
Sbjct: 201 GEAFVRFTTQDAAEKAMDYNNRHMGSRYVEVFMSSMVEFNRA 242
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IR+RGLP+ T K + +FF T E V FV G+ G+A+V F+ EEA
Sbjct: 66 IRLRGLPFNATEKDIHEFFAGLTI---------ERVKFVCT-TGRPNGEAYVEFKNTEEA 115
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
KA+ ++ I RYIE+F E +
Sbjct: 116 GKAMENDRKEISNRYIEVFTVEADEAE 142
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 404 DKRYIEVTKAN--GEDFINVAGGNNNEAQAFLTRGAQVIIR--MRGLPYECTAKQVIDFF 459
D+ Y + + + G GG++ ++ RG +R MRGLPY+ + FF
Sbjct: 286 DRGYDDYNRGSYGGRRDYGYNGGHDQGGRSDYGRGGDDPLRVYMRGLPYDADDHAIAAFF 345
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+S + G+ +P +GDA F+ + ALS++ + +G RY+ELF
Sbjct: 346 SPLRCHSVKI-----GINETGRP----SGDAIAEFDNYNDLQVALSRNNQRMGRRYVELF 396
Query: 520 RSTTA 524
+ A
Sbjct: 397 DNRGA 401
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 365 LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
+GG S R +GEA VRF Q+ + A+ + H+ RY+EV ++ +F GG
Sbjct: 189 IGGTGGPRS---RPSGEAFVRFTTQDAAEKAMDYNNRHMGSRYVEVFMSSMVEFNRAKGG 245
Query: 425 NNNEAQAFLTR 435
+ E A R
Sbjct: 246 GSGEYSASYER 256
>gi|221507828|gb|EEE33415.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 510
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 20/195 (10%)
Query: 348 WLSLLLNTIPGYEQVLGL--GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHID 404
W N I ++ V+ L V +C+ R GEA V+ D R+ A+K H +
Sbjct: 61 WDVQEENVIAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLG 120
Query: 405 KRYIEVTKANGEDF---------INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQV 455
R+IEV +A+ E+F + A N ++ R ++++RGLP+ C+ ++
Sbjct: 121 TRWIEVFRASEEEFQKADDRRKTVMAAISGNTDSLDASRRMNLNVVKLRGLPWSCSENEI 180
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIR 514
+ FF+ +S +V+ G G DG+ +G AFV + A+KA HK+ +G R
Sbjct: 181 VRFFKGFDIHSDDVVLGVTG-------DGRLSGIAFVELPSPDVAEKAREVLHKKYMGRR 233
Query: 515 YIELFRSTTAEVQQV 529
+IE++ +T ++Q+
Sbjct: 234 FIEVYPATREDMQRA 248
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 38/167 (22%)
Query: 440 IIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK- 496
++R+RGLP++ + VI FF+ EN + VL D + TG+A+V
Sbjct: 53 VVRLRGLPWDVQEENVIAFFKPVVALEN--------DNVLICIGFDKRTTGEAYVQLPDP 104
Query: 497 --EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
E+A K L H +G R+IE+FR++ E Q+ ++ + +++ + + L A +
Sbjct: 105 GLREQAIKDL--HGRLLGTRWIEVFRASEEEFQKADDRRKTV--MAAISGNTDSLDASRR 160
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
M + ++LRGLP+ + FF G
Sbjct: 161 M---------------------NLNVVKLRGLPWSCSENEIVRFFKG 186
>gi|225435437|ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
vinifera]
Length = 258
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI--------NVAGGN-- 425
GR GEA + AL+R++ ++ +RY+EV ++ +++ + GG+
Sbjct: 91 GRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSPR 150
Query: 426 --------NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
N+E + ++R+RGLP+ + + ++DFF+ + + E+ +
Sbjct: 151 RTAPKAKSNDEGKESAEHTG--VLRLRGLPFSASKEDIMDFFK-------DFVLSEDSIH 201
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+G+ TG+AFV F E++ A++K + ++G RYIELF S+ E+ + + +
Sbjct: 202 MTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRYIELFPSSLEELDEAVAR 256
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 29/169 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++C+ V +FF +S +++D VLFV K +G+ TG+AF + +
Sbjct: 57 VVRLRGLPFDCSEADVAEFF-----HSLDIVD----VLFVHK-NGRFTGEAFCVLGYPLQ 106
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
+ AL ++++++G RY+E+FRS E + + N ++ + G S
Sbjct: 107 VEFALQRNRQNMGRRYVEVFRSKRQEYYKAI--------ANEVSDTRGG--------SPR 150
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALC-ILMDIF--FVGQQDS 605
P S +RLRGLP+ A +MD F FV +DS
Sbjct: 151 RTAPKAKSNDEGKESAEHTGVLRLRGLPFSASKEDIMDFFKDFVLSEDS 199
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQM-DSEHSAYLAAQLRHNRNMIFGK 121
E I++F +F + +HM NS+G+P+GEAF++ ++E S A+ R M G
Sbjct: 184 EDIMDFFKDFV--LSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDR----MTLG- 236
Query: 122 KQRYIEVFQCSGEDMN 137
RYIE+F S E+++
Sbjct: 237 -SRYIELFPSSLEELD 251
>gi|118381178|ref|XP_001023750.1| hypothetical protein TTHERM_00245200 [Tetrahymena thermophila]
gi|89305517|gb|EAS03505.1| hypothetical protein TTHERM_00245200 [Tetrahymena thermophila
SB210]
Length = 570
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 352 LLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT 411
LL I Y++ +A + G+ +GEA VR Q + AL + + ++ R++E+
Sbjct: 288 LLKNIRIYKE-----DIAFLYDSEGKFSGEAYVRVYSQLDKQEALCYNLNKVEGRFVEIF 342
Query: 412 KANGEDFINVAGGNN------------NEAQ----AFLTRGAQVIIRMRGLPYECTAKQV 455
+ +F N A + NE Q +T GA V+ R+RGLPY CT + +
Sbjct: 343 ETTENEF-NRAKISQFPEKRNQDDELPNETQFDLNKIVTEGAGVV-RIRGLPYSCTEEDI 400
Query: 456 IDFFEAGTENSCNVMDG--EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGI 513
FF+ T ++ G + +L G+ G+ FV+F+ +++A KAL+ H E I
Sbjct: 401 KKFFKGLT-----ILQGGIKRAIL-----GGRPGGECFVIFQNKDDAHKALNFHMEKIHN 450
Query: 514 RYIELFRSTTAEVQQVL 530
R+IE+F +T E + +
Sbjct: 451 RFIEVFLATVKEFENYM 467
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ + GR GE V F +++ AL H I R+IEV A ++F N N
Sbjct: 412 GGIKRAILG-GRPGGECFVIFQNKDDAHKALNFHMEKIHNRFIEVFLATVKEFENYMAHN 470
Query: 426 NNEAQAFLTRG---------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
+ ++ + + + G+P+ T +++++FF+ N E +
Sbjct: 471 FVNSAPVYSKDNMPNIPQEKRKSTLMVMGMPFSVTKQKILEFFKGFDIN-------EREI 523
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKAL-SKHKESIGIRYIELF 519
+ GK +G A V FE E EA +AL +K+ I RY+ELF
Sbjct: 524 HLLCSHTGKFSGSALVTFEDELEAQRALKTKNFSYIENRYLELF 567
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 432 FLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
F Q IR+RGLPY ++ + + N+ +E + F+ +GK +G+A+
Sbjct: 262 FKNLSQQHFIRIRGLPYSAREPEIYELLK-------NIRIYKEDIAFLYDSEGKFSGEAY 314
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
V + + +AL + + R++E+F +T E + K + P+ +
Sbjct: 315 VRVYSQLDKQEALCYNLNKVEGRFVEIFETTENEFNRA--KISQFPEKRN---------- 362
Query: 552 QQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
Q L + Q + I+T G +R+RGLPY C DI FF G
Sbjct: 363 QDDELPNETQFDL----NKIVTEGA--GVVRIRGLPYS--CTEEDIKKFFKG 406
>gi|167535939|ref|XP_001749642.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771790|gb|EDQ85451.1| predicted protein [Monosiga brevicollis MX1]
Length = 948
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR G+A V E +AL+++K R +++ + + ++ ++ L
Sbjct: 608 GRCEGKACVLVCTPEDARLALEKNKTEFKGRSVDIEMGTADTWNDLLKWYQDQ---LLRS 664
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
++ R+RGLP+ C+ V DF + N+ NV +G+ TG A+ +F
Sbjct: 665 TDTLVARLRGLPWSCSRDDVYDFLQPSGINANNV-------FVCHALNGRPTGTAYAVFS 717
Query: 496 KEEEA---DKALSKHKESIGIRYIELFRSTTAEV 526
+ D A+ +HK IG RYIE+ RST AE+
Sbjct: 718 GSTASQCFDLAMRQHKSKIGDRYIEVNRSTVAEM 751
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR+RGL +E AK+V+ E G + + + G + + GK G+A+ + E
Sbjct: 478 VIRLRGLKWEWAAKEVLPMLE-GLD-----VQADSGFICYNR-QGKPIGEAYFIMGSPEA 530
Query: 500 ADKALSKHKESIGIRYIELF 519
A A ++ +G RYIE+F
Sbjct: 531 AQAAFARSGAMLGDRYIEVF 550
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I +RG+PYE T ID++ GT ++ G VL +KP+G++ GDA V E A
Sbjct: 873 ILLRGIPYEATEVD-IDYWMTGTP----IVAGMTRVL--RKPNGRSQGDAVVYTATREGA 925
Query: 501 D--KALSKHKESIGIRYIELF 519
KA+ +H + +G R IE+
Sbjct: 926 GMIKAM-RHNQMMGHRTIEVL 945
>gi|388504640|gb|AFK40386.1| unknown [Medicago truncatula]
Length = 259
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 81/156 (51%), Gaps = 23/156 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQ-------------- 438
D AL+R++ +I +RY+EV ++ +++ ++A+ R +
Sbjct: 109 DFALQRNRQNIGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSAPRAKPYDEGKDSAE 168
Query: 439 --VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++R+RGLP+ ++DFF+ + E+ + V +G+ G+A+V FE
Sbjct: 169 HTGVLRLRGLPFFANKDDIMDFFK-------EYVLSEDSIHIVMNSEGRPFGEAYVEFEN 221
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+++ A++K + ++G RYIELF ST E++ +++
Sbjct: 222 ADDSKAAMAKDRMTLGSRYIELFPSTHGEMEDAISR 257
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 29/169 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK +G+ F + +
Sbjct: 58 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHKG-GKFSGEGFCVLGYPLQ 107
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +++++IG RY+E+FRS E + + N ++ + G P S
Sbjct: 108 VDFALQRNRQNIGRRYVEVFRSKRQEYYKAI--------ANEVSDARGG----SPRRS-- 153
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA-LCILMDIF--FVGQQDS 605
A PY S +RLRGLP+ A +MD F +V +DS
Sbjct: 154 APRAKPY--DEGKDSAEHTGVLRLRGLPFFANKDDIMDFFKEYVLSEDS 200
>gi|224059562|ref|XP_002299908.1| predicted protein [Populus trichocarpa]
gi|222847166|gb|EEE84713.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 82/155 (52%), Gaps = 22/155 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR----------GAQV--- 439
D AL++++ ++ +RY+EV ++ +D+ +E++ R G +
Sbjct: 104 DFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSESRGSPRRNISRAKSYDEGKDLAEH 163
Query: 440 --IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++R+RGLP+ +++FF+ + + E+ + +G+ TG+AFV F
Sbjct: 164 TGVLRLRGLPFSAGKDDIMEFFK-------DFVLSEDLIHITMNSEGRPTGEAFVEFANA 216
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A++K + ++G RYIELF S+ E+ + +++
Sbjct: 217 EDSKAAMAKDRMTLGSRYIELFPSSIEELDEAVSR 251
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 35/155 (22%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF +++D VLFV K GK TG+AF + +
Sbjct: 53 VVRLRGLPFDCTETDVAEFFRG-----LDIVD----VLFVHK-GGKFTGEAFCVLGYPLQ 102
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL----NKTMELPKNNSLTSSNNGLSAQQPM 555
D AL K+++++G RY+E+FRS + + + +++ P+ N S + +
Sbjct: 103 VDFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSESRGSPRRN--ISRAKSYDEGKDL 160
Query: 556 LSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
H +RLRGLP+ A
Sbjct: 161 AEHTG-------------------VLRLRGLPFSA 176
>gi|402910822|ref|XP_003918047.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Papio
anubis]
Length = 386
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 28/113 (24%)
Query: 436 GAQVIIRMR---------------------GLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
GA VI R+R GLP+ C+ ++++ FF +G E N
Sbjct: 41 GAHVITRLREQKIRYNSFSHSSNDGYLGFQGLPFGCSKEEIVQFF-SGLEIVPN------ 93
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 94 GMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 146
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 245 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 295
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 296 VAAMAKDKANMQHRYVELFLNSTA 319
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 94 GMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 141
>gi|118090272|ref|XP_420600.2| PREDICTED: G-rich sequence factor 1 [Gallus gallus]
Length = 410
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ GRR G+A++ + AL+++ ++ RY++V + + +D +
Sbjct: 118 GENGIHFLLNRDGRRRGDALIELESKADVQKALEKNLRYMGTRYVKVHEIHDKDVDGLLQ 177
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
E++ + ++ +RGLP++ T + DFF AG + D + FV + +
Sbjct: 178 SLRYESEVM----SDGVVLLRGLPFDSTEDDIADFF-AG----LRITD----MTFVYRGE 224
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
K TG+A+V F E KAL +HKE + RYIE++ ST E+Q+ L+ E+
Sbjct: 225 RK-TGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRKEM 276
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR G P+ CT K+++ FF +SC + +GE G+ F+ DG+ GDA + E + +
Sbjct: 91 LIRAHGFPFACTKKEMMAFF-----DSCKIRNGENGIHFLLNRDGRRRGDALIELESKAD 145
Query: 500 ADKALSKHKESIGIRYIEL 518
KAL K+ +G RY+++
Sbjct: 146 VQKALEKNLRYMGTRYVKV 164
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 50/184 (27%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA----------G 423
R+ GEA V+F E AL RHK +++ RYIEV TK + +++ G
Sbjct: 225 RKTGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRKEMIRLRRELG 284
Query: 424 GNNNEAQAFLTRGAQV----------------------------IIRMRGLPYECTAKQV 455
E + TRG+ + +RG P + +A+ +
Sbjct: 285 STAEERELDYTRGSSAEREKEVASEAAESSGLSSQSGSILSSLRTVHVRGFPPQVSAQDI 344
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRY 515
+DFF +L DG ATG+A V FE ++A A++K + +
Sbjct: 345 VDFFAPLKPTR---------ILIEYNSDGVATGEADVHFESYDDAVAAMAKERAQLQFGT 395
Query: 516 IELF 519
+E+F
Sbjct: 396 VEVF 399
>gi|302850710|ref|XP_002956881.1| hypothetical protein VOLCADRAFT_121578 [Volvox carteri f.
nagariensis]
gi|300257762|gb|EFJ42006.1| hypothetical protein VOLCADRAFT_121578 [Volvox carteri f.
nagariensis]
Length = 628
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
GV L + + + GEA V F E ++K H + ++ G+ ++ + +
Sbjct: 171 GVQLVVRSDNKPTGEAFVDFETPEEAARSIKEKDHKV------FSEKFGDRYVRLIQVSR 224
Query: 427 NEAQAFLTR--GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
E QA L G + +++M+G+P++ TA V FF + EGV F+ DG
Sbjct: 225 KEMQATLALRFGGEGVLKMKGIPFKATAVDVRKFFTGYKVKT-------EGVSFIMHADG 277
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ TG AF+ FE +EA +A+ K + G Y + F
Sbjct: 278 RPTGMAFIEFETPQEAVRAMEKDRAKFGPEYGDRF 312
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 31/176 (17%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKH----HIDKRYIEVTKANGEDFINVAGGNNNEAQA 431
GR NGEA V F D + A ++ + RY+ V D ++ AQA
Sbjct: 66 GRPNGEAFVVFEDSDEARRATQKDRETFGEKFGDRYVRVYPTLDSDIPDMQAA---VAQA 122
Query: 432 FLTRGAQ------------VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
L AQ +++++ LP++ T +I FFE N GV V
Sbjct: 123 QLHEQAQGSGNHGHGAHSDSVVKIKSLPFDATQLDIIQFFE-------NFKLKPNGVQLV 175
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK--HK---ESIGIRYIELFRSTTAEVQQVL 530
+ D K TG+AFV FE EEA +++ + HK E G RY+ L + + E+Q L
Sbjct: 176 VRSDNKPTGEAFVDFETPEEAARSIKEKDHKVFSEKFGDRYVRLIQVSRKEMQATL 231
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++M+GLP++ + +I FF T + V K PDG+ G+AFV+FE +E
Sbjct: 29 VVKMKGLPFKGGKEDIIKFFAGFTVRP-------DQVFLRKHPDGRPNGEAFVVFEDSDE 81
Query: 500 ADKALSKHKES----IGIRYIELFRSTTAEV 526
A +A K +E+ G RY+ ++ + +++
Sbjct: 82 ARRATQKDRETFGEKFGDRYVRVYPTLDSDI 112
>gi|224002324|ref|XP_002290834.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974256|gb|EED92586.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 387
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++ + + ++DFF+ N + E VL + DG++TG+ +V F+ ++A
Sbjct: 299 VRLRGLPFQASKQDILDFFQ-----EYNPI--ESSVLLTYRGDGRSTGEGYVAFKDADDA 351
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
+A++ H+ +IG RYIELF S E
Sbjct: 352 KEAMALHRSTIGSRYIELFISNKEE 376
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+E T + V+ FF+ V+D V+ V + +G+AFV+F +
Sbjct: 94 VRVRGLPFEATLEDVLVFFQG-----LVVID----VVLVPHAE---SGEAFVVFANPMDF 141
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
L + +S+G RY+E+F+ ++
Sbjct: 142 QMGLQRDHQSMGRRYLEVFQGKRSD 166
>gi|237839439|ref|XP_002369017.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211966681|gb|EEB01877.1| RRM domain-containing protein [Toxoplasma gondii ME49]
Length = 513
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 348 WLSLLLNTIPGYEQVLGL--GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHID 404
W N I ++ V+ L V +C+ R GEA V+ D R+ A+K H +
Sbjct: 61 WDVQEENVIAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLG 120
Query: 405 KRYIEVTKANGEDF---------INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQV 455
R+IEV +A+ E+F + A N ++ R ++++RGLP+ C+ ++
Sbjct: 121 TRWIEVFRASEEEFQKADDRRKTVMAAISGNTDSLDASRRMNLNVVKLRGLPWSCSENEI 180
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIR 514
+ FF+A E ++ + V+ DG+ +G AFV + A+KA HK+ +G R
Sbjct: 181 VRFFKA--EGGFDIHS--DDVVLGVTGDGRLSGIAFVELPSPDVAEKAREVLHKKYMGRR 236
Query: 515 YIELFRSTTAEVQQV 529
+IE++ +T ++Q+
Sbjct: 237 FIEVYPATREDMQRA 251
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 38/154 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK- 496
++R+RGLP++ + VI FF+ EN + VL D + TG+A+V
Sbjct: 53 VVRLRGLPWDVQEENVIAFFKPVVALEN--------DNVLICIGFDKRTTGEAYVQLPDP 104
Query: 497 --EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
E+A K L H +G R+IE+FR++ E Q+ ++ + +++ + + L A +
Sbjct: 105 GLREQAIKDL--HGRLLGTRWIEVFRASEEEFQKADDRRKTV--MAAISGNTDSLDASRR 160
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
M + ++LRGLP+
Sbjct: 161 M---------------------NLNVVKLRGLPW 173
>gi|221483341|gb|EEE21660.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 508
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 348 WLSLLLNTIPGYEQVLGL--GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHID 404
W N I ++ V+ L V +C+ R GEA V+ D R+ A+K H +
Sbjct: 61 WDVQEENVIAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLG 120
Query: 405 KRYIEVTKANGEDF---------INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQV 455
R+IEV +A+ E+F + A N ++ R ++++RGLP+ C+ ++
Sbjct: 121 TRWIEVFRASEEEFQKADDRRKTVMAAISGNTDSLDASRRMNLNVVKLRGLPWSCSENEI 180
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIR 514
+ FF+A E ++ + V+ DG+ +G AFV + A+KA HK+ +G R
Sbjct: 181 VRFFKA--EGGFDIHS--DDVVLGVTGDGRLSGIAFVELPSPDVAEKAREVLHKKYMGRR 236
Query: 515 YIELFRSTTAEVQQV 529
+IE++ +T ++Q+
Sbjct: 237 FIEVYPATREDMQRA 251
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 38/154 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK- 496
++R+RGLP++ + VI FF+ EN + VL D + TG+A+V
Sbjct: 53 VVRLRGLPWDVQEENVIAFFKPVVALEN--------DNVLICIGFDKRTTGEAYVQLPDP 104
Query: 497 --EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
E+A K L H +G R+IE+FR++ E Q+ ++ + +++ + + L A +
Sbjct: 105 GLREQAIKDL--HGRLLGTRWIEVFRASEEEFQKADDRRKTV--MAAISGNTDSLDASRR 160
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
M + ++LRGLP+
Sbjct: 161 M---------------------NLNVVKLRGLPW 173
>gi|302789778|ref|XP_002976657.1| hypothetical protein SELMODRAFT_416554 [Selaginella moellendorffii]
gi|300155695|gb|EFJ22326.1| hypothetical protein SELMODRAFT_416554 [Selaginella moellendorffii]
Length = 287
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQ----- 430
GR +GEA V D AL+R++ ++ +RY+EV ++ +D+ + N+ +
Sbjct: 100 GRFSGEAFVVLGAPMQVDFALQRNRQNMGRRYVEVFRSKKQDYYSAVATEVNDPRSGDVL 159
Query: 431 AFLTRGAQV-------------------------------IIRMRGLPYECTAKQVIDFF 459
A L A ++++RGLP+ + + +++FF
Sbjct: 160 ATLASSAAGGGGGGGGGGGGGGGGSGKNSLCDKDLAEHTGVLKLRGLPFSASKRDIVEFF 219
Query: 460 -EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E G + E+ V V DG+ATG+A+V F ++ A++K K ++G RY+EL
Sbjct: 220 REFGLK--------EDSVQIVVHSDGRATGEAYVFFLGPGDSKAAMNKDKMTLGNRYVEL 271
Query: 519 FRSTTAEVQQVLNKT 533
F S+ E + +K+
Sbjct: 272 FPSSREEANRAASKS 286
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ V +FF +V+D VL V+K G+ +G+AFV+ +
Sbjct: 66 VVRLRGLPFNCSESDVFEFFAG-----LDVVD----VLLVRK-QGRFSGEAFVVLGAPMQ 115
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
D AL ++++++G RY+E+FRS + + + P++ + ++
Sbjct: 116 VDFALQRNRQNMGRRYVEVFRSKKQDYYSAVATEVNDPRSGDVLAT 161
>gi|77553600|gb|ABA96396.1| heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza
sativa Japonica Group]
Length = 235
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F + AL R++ ++ +RY+EV + +++ + N+ F +
Sbjct: 68 GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGFFDSE 127
Query: 436 GAQV--------------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
++++RGLPY T + +I FF E +E
Sbjct: 128 YRHSPPPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFF---VEYELT----DEN 180
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
V V +PDGKATG+A+V F E A+ K K +IG
Sbjct: 181 VHIVYRPDGKATGEAYVEFPTAEVVKTAMCKDKMTIG 217
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 35 VRLRGLPFDCDDLDICKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 84
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S H
Sbjct: 85 EFALHRNRQNMGRRYVEVFRCKKQEYYSAI--AAEVNQGGFFDSE----------YRHSP 132
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKVPK 612
P P P +S + ++LRGLPY A + FFV + D VH V +
Sbjct: 133 PPPRPKKPAEDKSSMEYTEVLKLRGLPYSATTEDIIKFFVEYELTDENVHIVYR 186
>gi|351700500|gb|EHB03419.1| Heterogeneous nuclear ribonucleoprotein H3 [Heterocephalus glaber]
Length = 260
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+ GLP+ C+ ++++ FF+ +M G+ G++TG+ FV F +E A
Sbjct: 18 VRLLGLPFGCSKEEIVQFFQW-----LEIM--PNGITMTMDYQGRSTGETFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ ++++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSKIK 97
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ + + GR GE V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITMTMDYQGRSTGETFVQFASKEIAENALGKHKERIGHRYIEIFRSS-----------R 93
Query: 427 NEAQAFLTRGAQVIIRMRGLPYE-----------CTAKQVIDFFEAGTENS-CNVMDGEE 474
++ + F +++ + G PY+ F + G NS C DG
Sbjct: 94 SKIKGFYDPPRRLLGQRLG-PYDRPIGGRGGYYGAGRGSYGGFDDYGGYNSYCYGNDGF- 151
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
G DG+A G+A V F E+ A+SK K ++ RYIELF ++T
Sbjct: 152 GDRMRDGRDGRAKGEADVEFVTHEDPVAAMSKDKNNMQHRYIELFLNST 200
>gi|395737930|ref|XP_003777005.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H2-like [Pongo abelii]
Length = 596
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V + + K + + R++EV K+N D+++
Sbjct: 26 GTSGICFIYTREGRPSGEAFVELESXQMKRTGFK-DRETMGHRHVEVFKSNSVEMDWVSK 84
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A + +RGLP+ C ++++ FF +G E N G+
Sbjct: 85 HTGLNSPDTA-----NDGFVWLRGLPFGCXKEEIVHFF-SGLEIVPN------GITLXVD 132
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
G++TG+AFV +E A+ AL KH+E IG RYIE+ S AEV + +L
Sbjct: 133 FQGRSTGEAFVPLASQEIAETALKKHRERIGHRYIEIXNS-QAEVHTYCDPCQKL 186
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
++++GLP+ C+A +V+ F + C + +G G+ F+ +G+ +G+AFV E +
Sbjct: 1 MKVQGLPWSCSADEVMHF------SDCKIQNGTSGICFIYTREGRPSGEAFVELESXQMK 54
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
K +E++G R++E+F+S + E+ V T NS ++N+G
Sbjct: 55 RTGF-KDRETMGHRHVEVFKSNSVEMDWVSKHT----GLNSPDTANDGF 98
>gi|402585392|gb|EJW79332.1| hypothetical protein WUBG_09760 [Wuchereria bancrofti]
Length = 236
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-----NVA 422
+ L++ GR +GE V DQE A K ++ I+ RYIEV + + + V
Sbjct: 38 ITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRYIEVFSVSDAELLMMIRHGVI 97
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
G+ +A + + ++R+RGLPY T + +FF +G E + V+D K+P
Sbjct: 98 KGSGGDADS--RYASNFVVRLRGLPYSATIDDIKEFF-SGLEVADAVID--------KEP 146
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIR----YIELFRSTTAEVQQVLNKTME 535
G+ +G+AFV +E A+ AL + K +G R L+ A ++Q++++ E
Sbjct: 147 GGRPSGEAFVRLATKEYAELALERSKNYMGSRKESEVFLLYGIRAASIRQLVDEACE 203
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 42/176 (23%)
Query: 441 IRMRGLPYECTAKQVIDFFEA---GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
IR+RGLP+ + V DF + G + + F +G+A+G+ +V + +
Sbjct: 8 IRLRGLPFAAKEQDVRDFLQVFFFGL--------NAKSITFTLTSNGRASGECYVELDDQ 59
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS 557
E +A + I RYIE+F + AE+ ++ + +G A S
Sbjct: 60 EAVKEAQKLDRNEINGRYIEVFSVSDAELLMMIRHGV---------IKGSGGDADSRYAS 110
Query: 558 HLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVGQQ--DSFVHKVP 611
+ +RLRGLPY A + FF G + D+ + K P
Sbjct: 111 NF--------------------VVRLRGLPYSATIDDIKEFFSGLEVADAVIDKEP 146
>gi|401410426|ref|XP_003884661.1| GL11864, related [Neospora caninum Liverpool]
gi|325119079|emb|CBZ54631.1| GL11864, related [Neospora caninum Liverpool]
Length = 503
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 348 WLSLLLNTIPGYEQVLGL--GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHID 404
W N + ++ V+ L V +C+ R GEA V+ D R+ A+K H +
Sbjct: 62 WDVQEENVVAFFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLG 121
Query: 405 KRYIEVTKANGEDF---------INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQV 455
R+IEV +A+ E+F + A N ++ R ++++RGLP+ C+ ++
Sbjct: 122 TRWIEVFRASEEEFQKADDRRKTVMAAISGNTDSLDASRRMNLNVVKLRGLPWSCSESEI 181
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIR 514
+ FF+A E + + + V+ DG+ +G AFV E A+KA HK+ +G R
Sbjct: 182 VRFFKA--EGGFEIHN--DDVVLGVTGDGRLSGIAFVELPSPEVAEKAREVLHKKYMGRR 237
Query: 515 YIELFRSTTAEVQQV 529
+IE++ +T ++Q+
Sbjct: 238 FIEVYPATREDMQRA 252
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 38/154 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK- 496
++R+RGLP++ + V+ FF+ EN + VL D + TG+A+V
Sbjct: 54 VVRLRGLPWDVQEENVVAFFKPVVALEN--------DNVLICIGFDKRTTGEAYVQLPDP 105
Query: 497 --EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQP 554
E+A K L H +G R+IE+FR++ E Q+ ++ + +++ + + L A +
Sbjct: 106 GLREQAIKDL--HGRLLGTRWIEVFRASEEEFQKADDRRKTVMA--AISGNTDSLDASRR 161
Query: 555 MLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPY 588
M + ++LRGLP+
Sbjct: 162 M---------------------NLNVVKLRGLPW 174
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP-DGKATGDAFVLFEKEE 498
++R+RGLPY + ++ FF N ++ +L P DG+ +G+A+V F
Sbjct: 405 VLRLRGLPYSANEQHIVQFF-----NGFHMA----AILPSTIPIDGRPSGEAYVQFVDAA 455
Query: 499 EADKAL-SKHKESIGIRYIELFRSTTAEVQ 527
EA +A +K+ + R IELF S+ E++
Sbjct: 456 EAFRAFQAKNGARMDKRMIELFPSSKQEME 485
>gi|302782846|ref|XP_002973196.1| hypothetical protein SELMODRAFT_413714 [Selaginella moellendorffii]
gi|300158949|gb|EFJ25570.1| hypothetical protein SELMODRAFT_413714 [Selaginella moellendorffii]
Length = 289
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 47/197 (23%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQ----- 430
GR +GEA V D AL+R++ ++ +RY+EV ++ +D+ + N+ +
Sbjct: 100 GRFSGEAFVVLGAPMQVDFALQRNRQNMGRRYVEVFRSKKQDYYSAVATEVNDPRSGDVL 159
Query: 431 AFLTRGAQV---------------------------------IIRMRGLPYECTAKQVID 457
A L A ++++RGLP+ + + +++
Sbjct: 160 ATLASSAAGGGGGGGGSGGGGGGGGSSGKNSLCDKDLAEHTGVLKLRGLPFSASKRDIVE 219
Query: 458 FF-EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYI 516
FF E G + E+ V V DG+ATG+A+V F ++ A++K K ++G RY+
Sbjct: 220 FFREFGLK--------EDSVQIVVHSDGRATGEAYVFFLGPGDSKAAMNKDKMTLGNRYV 271
Query: 517 ELFRSTTAEVQQVLNKT 533
ELF S+ E + +K+
Sbjct: 272 ELFPSSREEANRAASKS 288
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ V +FF +V+D VL V+K G+ +G+AFV+ +
Sbjct: 66 VVRLRGLPFNCSESDVFEFFAG-----LDVVD----VLLVRK-QGRFSGEAFVVLGAPMQ 115
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
D AL ++++++G RY+E+FRS + + + P++ + ++
Sbjct: 116 VDFALQRNRQNMGRRYVEVFRSKKQDYYSAVATEVNDPRSGDVLAT 161
>gi|260797907|ref|XP_002593942.1| hypothetical protein BRAFLDRAFT_234856 [Branchiostoma floridae]
gi|229279174|gb|EEN49953.1| hypothetical protein BRAFLDRAFT_234856 [Branchiostoma floridae]
Length = 678
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 117/319 (36%), Gaps = 87/319 (27%)
Query: 338 VALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALK 397
+ L L N+ +S + + G E + G+ + + FG + G+A V+F A++
Sbjct: 152 IQLFGLNTNVTVSEIHSLFSGLE--IASDGIVIEMDPFGNKTGKAFVKFKSVRDCSAAVR 209
Query: 398 RHKHHIDKRYIEVTKAN------GEDFINV------------------------------ 421
+K ++ R+IEV DF
Sbjct: 210 TYKEYLAARHIEVMSCTESQWQIAYDFAKAVQTPAVSYANTNTGMMQRMQPQPRQTQPPP 269
Query: 422 ----------AGGNNNEAQAF--------LTRGAQVIIRMRGLPYECTAKQVIDFFEA-G 462
+G N AQ + R + I ++GLPY K V DFF+ G
Sbjct: 270 QHSRSPVMPRSGAQQNRAQGTQRPRSRSPIDRTDSMCISLKGLPYTAKDKDVRDFFKGLG 329
Query: 463 TENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
+++ DGKA G FV F+ + AL HK+ +G RYIE+ +
Sbjct: 330 IRK-----------VWIDFEDGKAIGSGFVEFKSYGDQKAALRMHKKYMGSRYIEVTSAP 378
Query: 523 TAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR 582
+ ++Q+ + K PK S + + ++ L A+ C+
Sbjct: 379 STDMQKHIQKFHTKPKKGSKSPGKEAKTTKE--LDPRAKC-----------------CMH 419
Query: 583 LRGLPYEALCILMDIFFVG 601
+ LPY+A ++ FF G
Sbjct: 420 VWNLPYKASKREIENFFTG 438
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 24/191 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-------------NVA 422
G+ G V F + AL+ HK ++ RYIEVT A D + +
Sbjct: 340 GKAIGSGFVEFKSYGDQKAALRMHKKYMGSRYIEVTSAPSTDMQKHIQKFHTKPKKGSKS 399
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
G + L A+ + + LPY+ + +++ +FF T E G+ V
Sbjct: 400 PGKEAKTTKELDPRAKCCMHVWNLPYKASKREIENFFTGSTI-------AERGIHMVYTK 452
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSL 542
G+ +G+ FV F + D+A + +G R + L R + E + M P +
Sbjct: 453 TGEFSGEVFVEFVSISDCDRAYKLRAKRLGGR-MALLRPISRE---EMRDRMARPTQRDM 508
Query: 543 TSSNNGLSAQQ 553
+S+ +Q
Sbjct: 509 RTSDKDRDRRQ 519
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP+ +A + FF T + DG GV V G GDAF++F +E
Sbjct: 3 VVIRLQGLPWSASAMDIRSFFSGLT-----IPDG--GVHIV----GGDAGDAFIIFASDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+A +A+++ +I I L+ S+ E+Q +N
Sbjct: 52 DARQAMARTGNTIHGSPITLYLSSRKEMQDRIN 84
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 31/188 (16%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
AQ I++ GL T ++ F +G E + +G++ P G TG AFV F+
Sbjct: 148 AQTCIQLFGLNTNVTVSEIHSLF-SGLEIAS------DGIVIEMDPFGNKTGKAFVKFKS 200
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN--KTMELPKNNSLTSSNNGLSAQQP 554
+ A+ +KE + R+IE+ T ++ Q + K ++ P S ++N G+ +
Sbjct: 201 VRDCSAAVRTYKEYLAARHIEVMSCTESQWQIAYDFAKAVQTPA-VSYANTNTGMMQRMQ 259
Query: 555 MLSHLAQVPV-----PYLP----QHIITSGT----------RKD--CIRLRGLPYEALCI 593
Q P P +P Q GT R D CI L+GLPY A
Sbjct: 260 PQPRQTQPPPQHSRSPVMPRSGAQQNRAQGTQRPRSRSPIDRTDSMCISLKGLPYTAKDK 319
Query: 594 LMDIFFVG 601
+ FF G
Sbjct: 320 DVRDFFKG 327
>gi|84043632|ref|XP_951606.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma brucei
TREU927]
gi|33348520|gb|AAQ15845.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62359177|gb|AAX79621.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
brucei]
Length = 487
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHIDK-RYIEVTKANGEDFINVAGGNNNEAQAFL 433
G G VR + E +A+ R H+ +ID+ RY+E++ ++ E+ + +A
Sbjct: 61 GLHRGTGFVRLRNAEDAALAINRLHRQNIDETRYVEISTSSEEERQRIMEQQEQSNKA-- 118
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
++R+RGLP+ T V F E+ M+G + + DG+ TGDAF+
Sbjct: 119 -----CVLRLRGLPFAATEDDVRTFIES--------MEGVLSIDICRDMDGRNTGDAFIE 165
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
EE+ + H +++G RYIE+ ST + ++
Sbjct: 166 LASEEDVKRVKLLHSKAMGNRYIEVLPSTVYDRDAIM 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+PY + + + +FF V +GV V + TG+AFV E +
Sbjct: 387 VVRIRGVPYSASEEAIAEFF-------AGVKIPPQGVHMVYDERNRLTGEAFVEVEDRND 439
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM 534
AL ++ +G RYIE+F S+ A +Q++ M
Sbjct: 440 VLLALDRNGAMMGTRYIEVFESSPAAMQRLGTAQM 474
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+ GLPY +++ +FF S ++ D E V FV +G G FV E
Sbjct: 24 AVLRLYGLPYSIKEEKIREFF-----GSFSLADEEPIVFFV---EGLHRGTGFVRLRNAE 75
Query: 499 EADKALSK-HKESIG-IRYIELFRSTTAEVQQVLNK 532
+A A+++ H+++I RY+E+ S+ E Q+++ +
Sbjct: 76 DAALAINRLHRQNIDETRYVEISTSSEEERQRIMEQ 111
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 67 EFLGEFASNIVY--QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQR 124
E + EF + + QGVHMVY+ + + +GEAF++++ + LA L N M+ R
Sbjct: 400 EAIAEFFAGVKIPPQGVHMVYDERNRLTGEAFVEVEDRNDVLLA--LDRNGAMM---GTR 454
Query: 125 YIEVFQCS 132
YIEVF+ S
Sbjct: 455 YIEVFESS 462
>gi|47226618|emb|CAG07777.1| unnamed protein product [Tetraodon nigroviridis]
Length = 183
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I++++GLP+ CTA ++ FF + C + DG +G+ G+ +G AF+ E EE+
Sbjct: 7 IVQVKGLPWSCTADDLLKFF-----SECRIRDGVKGIHLTVNRMGRPSGRAFIEMEHEED 61
Query: 500 ADKALSKHKESIGIRYIE 517
+KAL KH++ +G RY+E
Sbjct: 62 VNKALEKHRQYLGPRYVE 79
>gi|261326510|emb|CBH09471.1| heterogeneous nuclear ribonucleoprotein H/F,putative [Trypanosoma
brucei gambiense DAL972]
Length = 488
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 25/161 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHIDK-RYIEVTKANGEDFINVAGGNNNEAQAFL 433
G G VR + E +A+ R H+ +ID+ RY+E++ ++ E E Q +
Sbjct: 62 GLHRGTGFVRLRNAEDAALAINRLHRQNIDETRYVEISTSSEE-----------ERQRIM 110
Query: 434 TRGAQ----VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGD 489
+ Q ++R+RGLP+ T V F E+ M+G + + DG+ TGD
Sbjct: 111 EQQEQSNKVCVLRLRGLPFAATEDDVRTFIES--------MEGVLSIDICRDMDGRNTGD 162
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
AF+ EE+ + H +++G RYIE+ ST + ++
Sbjct: 163 AFIELASEEDVKRVKLLHSKAMGNRYIEVLPSTVYDRDAIM 203
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+PY + + + +FF V +GV V + TG+AFV E +
Sbjct: 388 VVRIRGVPYSASEEAIAEFF-------AGVKIPPQGVHMVYDERNRLTGEAFVEVEDRND 440
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM 534
AL ++ +G RYIE+F S+ A +Q++ M
Sbjct: 441 VLLALDRNGAMMGTRYIEVFESSPAAMQRLGTAQM 475
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R+ GLPY +++ +FF S ++ D E V FV +G G FV E
Sbjct: 25 AVLRLYGLPYSIKEEKIREFF-----GSFSLADEEPIVFFV---EGLHRGTGFVRLRNAE 76
Query: 499 EADKALSK-HKESIG-IRYIELFRSTTAEVQQVLNK 532
+A A+++ H+++I RY+E+ S+ E Q+++ +
Sbjct: 77 DAALAINRLHRQNIDETRYVEISTSSEEERQRIMEQ 112
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 67 EFLGEFASNIVY--QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQR 124
E + EF + + QGVHMVY+ + + +GEAF++++ + LA L N M+ R
Sbjct: 401 EAIAEFFAGVKIPPQGVHMVYDERNRLTGEAFVEVEDRNDVLLA--LDRNGAMM---GTR 455
Query: 125 YIEVFQCS 132
YIEVF+ S
Sbjct: 456 YIEVFESS 463
>gi|358248784|ref|NP_001239939.1| uncharacterized protein LOC100805177 [Glycine max]
gi|255644706|gb|ACU22855.1| unknown [Glycine max]
Length = 261
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 82/156 (52%), Gaps = 23/156 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQV------------- 439
D AL+R++ ++ +RY+EV ++ +++ ++A+ R +
Sbjct: 111 DFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKESAE 170
Query: 440 ---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++R+RGLP+ + +++FF+ + E+ + + +G+ +G+A+ FE
Sbjct: 171 HTGVLRLRGLPFSASKDDIMEFFK-------DFGLPEDSIHIIMNSEGRPSGEAYAEFES 223
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A+ K + ++G RYIELF S+ E+++ +++
Sbjct: 224 AEDSKAAMIKDRMTLGSRYIELFPSSHGEMEEAISR 259
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 28/152 (18%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK TG+ F + +
Sbjct: 60 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHKG-GKFTGEGFCVLGYPLQ 109
Query: 500 ADKALSKHKESIGIRYIELFRSTTAE-VQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL ++++++G RY+E+FRS E + + N+ + + S++ S + S
Sbjct: 110 VDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKES- 168
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+H +RLRGLP+ A
Sbjct: 169 ---------AEHT-------GVLRLRGLPFSA 184
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ I+EF +F + +H++ NS+G+PSGEA+ + +S + AA ++ M G
Sbjct: 187 DDIMEFFKDFG--LPEDSIHIIMNSEGRPSGEAYAEFESAEDS-KAAMIKD--RMTLG-- 239
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F S +M ++
Sbjct: 240 SRYIELFPSSHGEMEEAIS 258
>gi|45709575|gb|AAH67720.1| Zgc:85960 protein [Danio rerio]
Length = 302
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 83/205 (40%), Gaps = 57/205 (27%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN------------ 414
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 31 GITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPPR 90
Query: 415 --------------------------GEDF---------INVAGGNNNEAQAFLTRGAQV 439
G F V+ G + F +
Sbjct: 91 KGMGMQRPGPYDRPSGGGRGYNGMSRGGSFDRMRRGGYGGGVSDGRYGDGGNFQSTTGHC 150
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+
Sbjct: 151 V-HMRGLPYRATEPDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHED 200
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K ++ RY+ELF ++TA
Sbjct: 201 AVAAMSKDKANMQHRYVELFLNSTA 225
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL-----NKTMELPK 538
G++TG+AFV F ++ A+KAL KHKE IG RYIE+F+S+ AEV+ M+ P
Sbjct: 40 GRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYEPPRKGMGMQRPG 99
Query: 539 NNSLTSSN----NGLSAQQPMLSHLAQVPVPYLPQHIITSG-----TRKDCIRLRGLPYE 589
S NG+S + G T C+ +RGLPY
Sbjct: 100 PYDRPSGGGRGYNGMSRGGSFDRMRRGGYGGGVSDGRYGDGGNFQSTTGHCVHMRGLPYR 159
Query: 590 A 590
A
Sbjct: 160 A 160
>gi|341877456|gb|EGT33391.1| hypothetical protein CAEBREN_08325 [Caenorhabditis brenneri]
Length = 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----------TKANGEDFINVAGGN 425
GR G+A V F +++ + ALK+ + H+ RYIEV + + +
Sbjct: 40 GRTCGDATVTFTNEDDYNRALKKDREHLGSRYIEVFPFDSAPRRRGDRDDYRPRSFPPRD 99
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+A G I+R+RGLP+ T + + DFF ++ +G+L + +
Sbjct: 100 RYSDRAGPRGGLDPIVRLRGLPFSVTIRDINDFFAP-----LPIV--RDGILLPDQQQAR 152
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-MELPK 538
G+A+V FE E A +H ++IG RYIE+F ++ E+ + ++ + +P+
Sbjct: 153 PGGEAYVCFESMESMQIAKQRHMKNIGHRYIEVFEASNRELTRFADENGLRVPR 206
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV--LFVKKPDGKATGDAFVLFEKEE 498
+ RGLP+E T + + DFF G G+ L + K +G+ GDA V F E+
Sbjct: 7 VSCRGLPWEATEEDLRDFF------------GNTGIESLDIPKRNGRTCGDATVTFTNED 54
Query: 499 EADKALSKHKESIGIRYIELF 519
+ ++AL K +E +G RYIE+F
Sbjct: 55 DYNRALKKDREHLGSRYIEVF 75
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRG+P+ T V DFF N ++ + ++P +GDA V+F ++
Sbjct: 492 VLRMRGVPFRATETDVYDFFHPIRPNQVELIRDYQ----FQRP----SGDARVIFFNRKD 543
Query: 500 ADKALSKHKESIGIRYIEL 518
D AL K K+ +G RYIE+
Sbjct: 544 YDDALMKDKQYMGERYIEM 562
>gi|407866924|gb|EKG08457.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 450
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHID-KRYIEVTKANGEDFINVAGGNNNEAQAFL 433
G G VR E + ++K+ H+ HID RY+E+T + E+ + + Q
Sbjct: 91 GLHRGTGFVRLKRTEDVEESIKKLHRQHIDANRYVELTASTEEERQRIL---EQQEQGCK 147
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++R+RGLP+ T + + +F + + G V + +G+ TGDAF+
Sbjct: 148 TH----VLRLRGLPFTSTEEDLREFVRS--------VPGVTRVDICRDMEGRNTGDAFIQ 195
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
EE+ ++A H +++G RYIE+ ST + ++
Sbjct: 196 LATEEDVEEAKQLHNKTMGSRYIEVLPSTMYDRDAIMR 233
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+PY T + + +FF V +GV V + TG+AFV E + +
Sbjct: 342 VVRIRGVPYAATEESIAEFF-------AGVKIPPQGVHMVYNEQNRPTGEAFVELENDSD 394
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
AL ++ ++G RYIE+F+S+ A +Q++
Sbjct: 395 LVAALERNGGAMGNRYIEVFQSSVAAMQRL 424
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I EF I QGVHMVYN Q +P+GEAF+++ E+ + L A L N +
Sbjct: 355 ESIAEFFA--GVKIPPQGVHMVYNEQNRPTGEAFVEL--ENDSDLVAALERNGGAM---G 407
Query: 123 QRYIEVFQCS 132
RYIEVFQ S
Sbjct: 408 NRYIEVFQSS 417
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+ GLPY + + + FF + +D ++ +L +G G FV ++ E+
Sbjct: 55 VVRLHGLPYSVSEETIRAFF------AEFELDEKDPILHFT--EGLHRGTGFVRLKRTED 106
Query: 500 ADKALSK-HKESIGI-RYIELFRSTTAEVQQVLNK 532
++++ K H++ I RY+EL ST E Q++L +
Sbjct: 107 VEESIKKLHRQHIDANRYVELTASTEEERQRILEQ 141
>gi|341879523|gb|EGT35458.1| CBN-HRPF-1 protein [Caenorhabditis brenneri]
Length = 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----------TKANGEDFINVAGGN 425
GR G+A V F +++ + ALK+ + H+ RYIEV + + +
Sbjct: 40 GRTCGDATVTFTNEDDYNRALKKDREHLGSRYIEVFPFDSAPRRRGDRDDYRPRSFPPRD 99
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+A G I+R+RGLP+ T + + DFF ++ +G+L + +
Sbjct: 100 RYSDRAGPRGGLDPIVRLRGLPFSVTIRDINDFFAP-----LPIV--RDGILLPDQQRAR 152
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-MELPK 538
G+A+V FE E A +H ++IG RYIE+F ++ E+ + ++ + +P+
Sbjct: 153 PGGEAYVCFESMESMQIAKQRHMKNIGHRYIEVFEASNRELTRFADENGLRVPR 206
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV--LFVKKPDGKATGDAFVLFEKEE 498
+ RGLP+E T + + DFF G G+ L + K +G+ GDA V F E+
Sbjct: 7 VSCRGLPWEATEEDLRDFF------------GNTGIESLDIPKRNGRTCGDATVTFTNED 54
Query: 499 EADKALSKHKESIGIRYIELF 519
+ ++AL K +E +G RYIE+F
Sbjct: 55 DYNRALKKDREHLGSRYIEVF 75
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRG+P+ T V DFF N ++ + ++P +GDA V+F ++
Sbjct: 492 VLRMRGVPFRATETDVYDFFHPIRPNQVELIRDYQ----FQRP----SGDARVIFFNRKD 543
Query: 500 ADKALSKHKESIGIRYIEL 518
D AL K K+ +G RYIE+
Sbjct: 544 YDDALMKDKQYMGERYIEM 562
>gi|71649626|ref|XP_813529.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma cruzi
strain CL Brener]
gi|70878421|gb|EAN91678.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 450
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHID-KRYIEVTKANGEDFINVAGGNNNEAQAFL 433
G G VR E + ++K+ H+ HID RY+E+T + E+ + + Q
Sbjct: 91 GLHRGTGFVRLKRPEDVEESIKKLHRQHIDANRYVELTASTEEERQRIL---EQQEQGCK 147
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++R+RGLP+ T + + +F + + G V + +G+ TGDAF+
Sbjct: 148 TH----VLRLRGLPFTSTEEDLREFVRS--------VPGVTRVDICRDMEGRNTGDAFIQ 195
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
EE+ ++A H +++G RYIE+ ST + ++
Sbjct: 196 LATEEDVEEAKQLHNKTMGSRYIEVLPSTMYDRDAIMR 233
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+PY T + + +FF V +GV V + TG+AFV E + +
Sbjct: 342 VVRIRGVPYAATEESIAEFF-------AGVKIPPQGVHMVYNEQNRPTGEAFVELENDSD 394
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
AL ++ ++G RYIE+F+S+ A +Q++
Sbjct: 395 LVAALERNGGAMGNRYIEVFQSSVAAMQRL 424
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I EF I QGVHMVYN Q +P+GEAF+++ E+ + L A L N +
Sbjct: 355 ESIAEFFA--GVKIPPQGVHMVYNEQNRPTGEAFVEL--ENDSDLVAALERNGGAM---G 407
Query: 123 QRYIEVFQCS 132
RYIEVFQ S
Sbjct: 408 NRYIEVFQSS 417
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+ GLPY + + + FF + +D ++ +L +G G FV ++ E+
Sbjct: 55 VVRLHGLPYSVSEETIRAFF------AEFELDEKDPILHFT--EGLHRGTGFVRLKRPED 106
Query: 500 ADKALSK-HKESIGI-RYIELFRSTTAEVQQVLNK 532
++++ K H++ I RY+EL ST E Q++L +
Sbjct: 107 VEESIKKLHRQHIDANRYVELTASTEEERQRILEQ 141
>gi|407393563|gb|EKF26660.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi marinkellei]
Length = 454
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHID-KRYIEVTKANGEDFINVAGGNNNEAQAFL 433
G G VR E + ++K+ H+ HID RY+E+T + E+ + + Q
Sbjct: 95 GLHRGTGFVRLKKPEDVEESIKKLHRQHIDANRYVELTASTEEERQRIL---EQQEQGCK 151
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++R+RGLP+ T + + +F + G V + +G+ TGDAF+
Sbjct: 152 TH----VLRLRGLPFTSTEEDLREF--------VRCVPGVTRVDICRDLEGRNTGDAFIQ 199
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
EE+ ++A H +++G RYIE+ ST + ++
Sbjct: 200 LATEEDVEEAKQLHNKTMGSRYIEVLPSTMYDRDAIMR 237
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+PY T + + +FF V +GV V + TG+AFV E + +
Sbjct: 346 VVRIRGVPYAATEESIAEFF-------AGVKIPPQGVHMVYNEQNRPTGEAFVELENDSD 398
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
AL ++ ++G RYIE+F+S+ A +Q++
Sbjct: 399 LVAALERNGGAMGNRYIEVFQSSVAAMQRL 428
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I EF I QGVHMVYN Q +P+GEAF+++ E+ + L A L N +
Sbjct: 359 ESIAEFFA--GVKIPPQGVHMVYNEQNRPTGEAFVEL--ENDSDLVAALERNGGAM---G 411
Query: 123 QRYIEVFQCS 132
RYIEVFQ S
Sbjct: 412 NRYIEVFQSS 421
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+ GLPY + + + FF +D + +L +G G FV +K E+
Sbjct: 59 VVRLHGLPYSVSEETIRAFFAEFE------LDENDPILHFT--EGLHRGTGFVRLKKPED 110
Query: 500 ADKALSK-HKESIGI-RYIELFRSTTAEVQQVLNK 532
++++ K H++ I RY+EL ST E Q++L +
Sbjct: 111 VEESIKKLHRQHIDANRYVELTASTEEERQRILEQ 145
>gi|71425877|ref|XP_813187.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma cruzi
strain CL Brener]
gi|70878047|gb|EAN91336.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 448
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHID-KRYIEVTKANGEDFINVAGGNNNEAQAFL 433
G G VR E + ++K+ H+ HID RY+E+T + E+ + + Q
Sbjct: 89 GLHRGTGFVRLKRPEDVEESIKKLHRQHIDANRYVELTASTEEERQRIL---EQQEQGCK 145
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++R+RGLP+ T + + +F + + G V + +G+ TGDAF+
Sbjct: 146 TH----VLRLRGLPFTSTEEDLREFVSS--------VPGVTRVDICRDMEGRNTGDAFIQ 193
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
EE+ ++A H +++G RYIE+ ST + ++
Sbjct: 194 LATEEDVEEAKQLHNKTMGSRYIEVLPSTMYDRDAIMR 231
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+PY T + + +FF V +GV V + TG+AFV E + +
Sbjct: 340 VVRIRGVPYAATEESIAEFF-------AGVKIPPQGVHMVYNEQNRPTGEAFVELENDSD 392
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQV 529
AL ++ ++G RYIE+F+S+ A +Q++
Sbjct: 393 LVAALERNGGAMGNRYIEVFQSSVAAMQRL 422
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I EF I QGVHMVYN Q +P+GEAF+++ E+ + L A L N +
Sbjct: 353 ESIAEFFA--GVKIPPQGVHMVYNEQNRPTGEAFVEL--ENDSDLVAALERNGGAM---G 405
Query: 123 QRYIEVFQCS 132
RYIEVFQ S
Sbjct: 406 NRYIEVFQSS 415
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+ GLPY + + + FF + +D ++ +L +G G FV ++ E+
Sbjct: 53 VVRLHGLPYSVSEETIRAFF------AEFELDEKDPILHFT--EGLHRGTGFVRLKRPED 104
Query: 500 ADKALSK-HKESIGI-RYIELFRSTTAEVQQVLNK 532
++++ K H++ I RY+EL ST E Q++L +
Sbjct: 105 VEESIKKLHRQHIDANRYVELTASTEEERQRILEQ 139
>gi|328717324|ref|XP_001952255.2| PREDICTED: hypothetical protein LOC100163028 [Acyrthosiphon pisum]
Length = 819
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G V ++ GR NG+A V +E+ ALK+ ++ RYI V +N +
Sbjct: 593 GASRVHFTMTTEGRPNGQAYVDMESEENLKAALKQDGEYMRDRYINVFPSNRSEM----- 647
Query: 424 GNNNEAQAFLTRGAQV----IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
Q G+++ + +RGLP++ T +++FF+ G E N G+
Sbjct: 648 -----EQDIKENGSKLDSDNCVHIRGLPFDFTKDDIVEFFQ-GLEMIPN------GITIS 695
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
G+ AFV F E +KAL KH + I RYIE+FRS+ E+
Sbjct: 696 NSSAGRIG--AFVQFVNRENVEKALKKHMKKIRQRYIEVFRSSLTEI 740
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRGL + T +I F E V DG V F +G+ G A+V E EE
Sbjct: 563 VVRMRGLSWSATTDAIIKFLSTSGE--AKVKDGASRVHFTMTTEGRPNGQAYVDMESEEN 620
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
AL + E + RYI +F S +E++Q ++ +N S S+N + H+
Sbjct: 621 LKAALKQDGEYMRDRYINVFPSNRSEMEQ------DIKENGSKLDSDNCV--------HI 666
Query: 560 AQVPVPYLPQHII 572
+P + I+
Sbjct: 667 RGLPFDFTKDDIV 679
>gi|341899985|gb|EGT55920.1| hypothetical protein CAEBREN_28420 [Caenorhabditis brenneri]
Length = 591
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 24/166 (14%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE---VTKANGE-DFINVAGGN 425
+C + GR NGEA V F +E ++ + + RYIE V ++ E +F G
Sbjct: 96 VCTT--GRPNGEAYVEFETKEDAGKGMENDRKEMSSRYIEIFTVPESEAELEFRPEPDGV 153
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN--SCNVMDGEEGVLFVKKPD 483
E ++R+RG+P+ C + V+ FF AG + + V+ G G P
Sbjct: 154 GEENH---------VVRLRGIPWSCKEEDVLQFF-AGLDPPPAETVIGGTGG------PK 197
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+ +G+AFV F + A+KA+ + +G RY+E+F S+ E +
Sbjct: 198 SRPSGEAFVRFATQAAAEKAMEYNNRHMGTRYVEVFMSSMVEFNRA 243
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ T K + +FF N + V FV G+ G+A+V FE +E+A
Sbjct: 67 VRLRGLPFNATEKDIHEFF-----NGLTIKR----VKFVCTT-GRPNGEAYVEFETKEDA 116
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
K + ++ + RYIE+F +E +
Sbjct: 117 GKGMENDRKEMSSRYIEIFTVPESEAE 143
>gi|341882686|gb|EGT38621.1| hypothetical protein CAEBREN_04314 [Caenorhabditis brenneri]
Length = 591
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 24/166 (14%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE---VTKANGE-DFINVAGGN 425
+C + GR NGEA V F +E ++ + + RYIE V ++ E +F G
Sbjct: 96 VCTT--GRPNGEAYVEFETKEDAGKGMENDRKEMSSRYIEIFTVPESEAELEFRPEPDGV 153
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN--SCNVMDGEEGVLFVKKPD 483
E ++R+RG+P+ C + V+ FF AG + + V+ G G P
Sbjct: 154 GEENH---------VVRLRGIPWSCKEEDVLQFF-AGLDPPPAETVIGGTGG------PK 197
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+ +G+AFV F + A+KA+ + +G RY+E+F S+ E +
Sbjct: 198 SRPSGEAFVRFATQAAAEKAMEYNNRHMGTRYVEVFMSSMVEFNRA 243
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ T K + +FF N + V FV G+ G+A+V FE +E+A
Sbjct: 67 VRLRGLPFNATEKDIHEFF-----NGLTIKR----VKFVCTT-GRPNGEAYVEFETKEDA 116
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
K + ++ + RYIE+F +E +
Sbjct: 117 GKGMENDRKEMSSRYIEIFTVPESEAE 143
>gi|356527218|ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Glycine
max]
Length = 260
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 81/156 (51%), Gaps = 23/156 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQV------------- 439
D AL+R++ ++ +RY+EV ++ +++ ++A+ R +
Sbjct: 110 DFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAE 169
Query: 440 ---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++R+RGLP+ + +++FF+ + E+ + + +G+ +G+A+ F
Sbjct: 170 HTGVLRLRGLPFSASKDDIMEFFK-------DFGLPEDSIHIIMNSEGRPSGEAYAEFAS 222
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A+ K + ++G RYIELF S+ E+++ +++
Sbjct: 223 AEDSKAAMVKDRMTLGSRYIELFPSSPGEMEEAISR 258
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK TG+ F + +
Sbjct: 59 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHKG-GKFTGEGFCVLGYPLQ 108
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL ++++++G RY+E+FRS E + + + + S S + +
Sbjct: 109 VDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSA 168
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
V +RLRGLP+ A
Sbjct: 169 EHTGV----------------LRLRGLPFSA 183
>gi|297830788|ref|XP_002883276.1| hypothetical protein ARALYDRAFT_318838 [Arabidopsis lyrata subsp.
lyrata]
gi|297329116|gb|EFH59535.1| hypothetical protein ARALYDRAFT_318838 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 13/95 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAG--TENSCNV-MDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+R+RGLP+ + ++DFF+ +E+S +V ++GE G+ TG+AFV F
Sbjct: 270 LRLRGLPFSAGKEDILDFFKDFELSEDSVHVTVNGE----------GRPTGEAFVEFRNA 319
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
EE+ A+ K ++++G RYIELF S+ E+++ L++
Sbjct: 320 EESRAAMVKDRKTLGSRYIELFPSSVEELEEALSR 354
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
R+RGLP++C V++FF + +V+D VLFV K + K TG+AF + + D
Sbjct: 124 RLRGLPFDCAEIDVVEFF-----HGLDVVD----VLFVHK-NNKVTGEAFCVLGYPLQVD 173
Query: 502 KALSKHKESIGIRYIELFRSTTAEVQQVL 530
AL K+++++G RY+E+FRST E + +
Sbjct: 174 FALQKNRQNMGRRYVEVFRSTKQEYYKAI 202
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E IL+F +F + VH+ N +G+P+GEAF++ + + AA ++ + +
Sbjct: 282 EDILDFFKDF--ELSEDSVHVTVNGEGRPTGEAFVEFRNAEES-RAAMVKDRKTL----G 334
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F S E++ L+
Sbjct: 335 SRYIELFPSSVEELEEALS 353
>gi|403301377|ref|XP_003941367.1| PREDICTED: G-rich sequence factor 1-like [Saimiri boliviensis
boliviensis]
Length = 291
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 444 RGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-ATGDAFVLFEKEEEADK 502
RGLPY C K ++DFF AG + FV G+ TG+A+V FE+ E A++
Sbjct: 59 RGLPYSCNKKDIVDFF-AGLNTV--------AITFVMDYRGRQKTGEAYVQFEEPEMANQ 109
Query: 503 ALSKHKESIGIRYIELFRSTTAE 525
AL KH+E IG RYIE+F S E
Sbjct: 110 ALLKHREEIGNRYIEIFPSRRNE 132
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 81/214 (37%), Gaps = 63/214 (29%)
Query: 364 GLGGVAL--CLSAFGR-RNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV--TKAN---- 414
GL VA+ + GR + GEA V+F + E + AL +H+ I RYIE+ ++ N
Sbjct: 76 GLNTVAITFVMDYRGRQKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEGRT 135
Query: 415 -------------------------------GEDFINVAGGNNN--------------EA 429
ED ++A + EA
Sbjct: 136 HVCSHKGKKMASSPTAKYITEPEMVFEEHEVNEDIRSMAAFESEKEIELPQEMPEKLPEA 195
Query: 430 QAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGD 489
F T + MRGLP++ A+ +I+FF + KATG+
Sbjct: 196 VDFGTTPCLYFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSRKATGE 246
Query: 490 AFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
A V FE E+A + K + RYIELF S+
Sbjct: 247 AEVHFEIHEDAVAVMLKDWSHVHHRYIELFLSSC 280
>gi|402580830|gb|EJW74779.1| hypothetical protein WUBG_14313, partial [Wuchereria bancrofti]
Length = 292
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV-KKPDGKATGDAFVLFEKEE 498
I+R+ GLPY CT ++++ FFE + + G++ + GK G+AFV F +E
Sbjct: 28 IVRLGGLPYGCTKEEIVRFFEP-------LEIADRGIVMTYDRYSGKPKGEAFVAFIDDE 80
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
A KAL+K+KE I RY++++ S+ E+ + L+ ++
Sbjct: 81 SASKALAKNKEYIQHRYVDIYPSSYGEMLRALDGGID 117
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 367 GVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGG 424
G+ + + G+ GEA V FID E AL ++K +I RY+++ ++ GE + GG
Sbjct: 56 GIVMTYDRYSGKPKGEAFVAFIDDESASKALAKNKEYIQHRYVDIYPSSYGEMLRALDGG 115
Query: 425 NNNEAQAFLTRGAQVIIRMRGLPYE 449
+ +RG + R R LPY+
Sbjct: 116 IDPYGS---SRGWERDRRPRALPYD 137
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+ ++MRG+P++C+ K+VI+FF+ ++D + F K DGK++G AFV F+ E
Sbjct: 305 MTVKMRGIPFKCSEKEVIEFFKPL------IIDD---IRFPKNKDGKSSGYAFVDFKTIE 355
Query: 499 EADKALSKHKESIGIRYIELF 519
+ AL K K+ I RYIELF
Sbjct: 356 DVKSALKKDKQKIQGRYIELF 376
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG------EDFINVAGGNNNEA 429
G+ +G A V F E ALK+ K I RYIE+ N DF +EA
Sbjct: 341 GKSSGYAFVDFKTIEDVKSALKKDKQKIQGRYIELFPVNDLENLKQNDFNKKWTQKGDEA 400
Query: 430 QAFLTRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEEGVLFVKKPDGKATG 488
++ ++ + R L Y CT + + F + G N L + K K TG
Sbjct: 401 DEDISDTGRLFV--RNLSYTCTEDSLTNLFSQFGPLVEIN--------LPIDKNSNKTTG 450
Query: 489 DAFVLFEKEEEADKALSKHKESI 511
AFV F + A KA+SK SI
Sbjct: 451 FAFVTFMMADHAIKAMSKLDGSI 473
>gi|302852446|ref|XP_002957743.1| hypothetical protein VOLCADRAFT_84201 [Volvox carteri f.
nagariensis]
gi|300256919|gb|EFJ41175.1| hypothetical protein VOLCADRAFT_84201 [Volvox carteri f.
nagariensis]
Length = 241
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-----VAGGN----- 425
GR +GEA+V + + AL +H+ I +R+IE+ ++ D+ V+G +
Sbjct: 69 GRFSGEALVVLGSLQLVEAALSKHRQFIGQRFIEIFPSSKRDYYRAVAAYVSGDSYGQQG 128
Query: 426 --NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G +++RGLP+ +I FF+ GT + + + +
Sbjct: 129 MGMGRGGMGAGSGGTTWLKLRGLPFAAVPDDIIAFFDDGTLGIPRL---DPSRVHMWTDG 185
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
G+ TG A V F +EA A SK K +G RY+E+F +T ++ + + +T E
Sbjct: 186 GRPTGMALVQFNTPQEASIARSKDKGLMGTRYVEIFPATRGDLDKFMARTGE 237
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++ + F E T + ++ VK+ DG+ +G+A V+ +
Sbjct: 37 VRLRGLPFDVMEGDIKMFLELETVD----------IVMVKR-DGRFSGEALVVLGSLQLV 85
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
+ ALSKH++ IG R+IE+F S+ +
Sbjct: 86 EAALSKHRQFIGQRFIEIFPSSKRD 110
>gi|9294416|dbj|BAB02497.1| unnamed protein product [Arabidopsis thaliana]
Length = 278
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R+RGLP+ + ++DFF+ + E+ V +G+ TG+AFV F E+
Sbjct: 191 ILRLRGLPFSAGKEDILDFFK-------DFELSEDFVHVTVNGEGRPTGEAFVEFRNAED 243
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ A+ K ++++G RYIELF S+ E+++ L++
Sbjct: 244 SRAAMVKDRKTLGSRYIELFPSSVEELEEALSR 276
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
R+RGLP++C V++FF + +V+D VLFV + + K TG+AF + + D
Sbjct: 46 RLRGLPFDCAELDVVEFF-----HGLDVVD----VLFVHR-NNKVTGEAFCVLGYPLQVD 95
Query: 502 KALSKHKESIGIRYIELFRSTTAEVQQVL 530
AL K+++++G RY+E+FRST E + +
Sbjct: 96 FALQKNRQNMGRRYVEVFRSTKQEYYKAI 124
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E IL+F +F + + VH+ N +G+P+GEAF++ + + AA ++ + +
Sbjct: 204 EDILDFFKDFELSEDF--VHVTVNGEGRPTGEAFVEFRNAEDS-RAAMVKDRKTL----G 256
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F S E++ L+
Sbjct: 257 SRYIELFPSSVEELEEALS 275
>gi|449016117|dbj|BAM79519.1| similar to heterogeneous nuclear ribonucleoprotein H3, isoform a
[Cyanidioschyzon merolae strain 10D]
Length = 642
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 440 IIRMRGLPYECTAKQVIDFFE-------AGTENSC---------NVMDGEEGVLFVKKPD 483
++R+RGLP+ T + V ++ G ++S V+ G G++FV
Sbjct: 313 VVRLRGLPWSATTRDVAEWIRQPPAKATMGADSSLLEDFIRRPLQVLPG--GIVFVYNHQ 370
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
G+ TG+ FV F E+A + L KH++ +G RYIE+F S+ ++ +L++
Sbjct: 371 GRKTGEVFVQFASPEDASRCLHKHEDRMGHRYIEVFLSSHQDMWNLLSR 419
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV 421
GG+ + GR+ GE V+F E L +H+ + RYIEV ++ +D N+
Sbjct: 361 GGIVFVYNHQGRKTGEVFVQFASPEDASRCLHKHEDRMGHRYIEVFLSSHQDMWNL 416
>gi|422294318|gb|EKU21618.1| rna binding protein [Nannochloropsis gaditana CCMP526]
Length = 302
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR +GEA V QE AL + K + R++++ +++ + + G A
Sbjct: 25 GRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDV 84
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G +++MRGLP++ T V +F S V GV DG+ TG+A+V+FE
Sbjct: 85 GYAGVLKMRGLPFQTTVPDVATWF-----GSYRV--APHGVFITMGADGRPTGEAYVIFE 137
Query: 496 KEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
E+A A +K+++ R+I+L+ ++ +V
Sbjct: 138 TPEDAVAAREALNKQTMNNRWIDLYLASKGDV 169
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
G+ FV + DG+++G+AFV+ +E +AL + K+ +G R++++F S E+
Sbjct: 16 GIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGEL 67
>gi|334185502|ref|NP_188725.3| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332642915|gb|AEE76436.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 292
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R+RGLP+ + ++DFF+ + E+ V +G+ TG+AFV F E+
Sbjct: 205 ILRLRGLPFSAGKEDILDFFK-------DFELSEDFVHVTVNGEGRPTGEAFVEFRNAED 257
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ A+ K ++++G RYIELF S+ E+++ L++
Sbjct: 258 SRAAMVKDRKTLGSRYIELFPSSVEELEEALSR 290
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
R+RGLP++C V++FF + +V+D VLFV + + K TG+AF + + D
Sbjct: 60 RLRGLPFDCAELDVVEFF-----HGLDVVD----VLFVHR-NNKVTGEAFCVLGYPLQVD 109
Query: 502 KALSKHKESIGIRYIELFRSTTAEVQQVL 530
AL K+++++G RY+E+FRST E + +
Sbjct: 110 FALQKNRQNMGRRYVEVFRSTKQEYYKAI 138
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E IL+F +F + + VH+ N +G+P+GEAF++ + + AA ++ + +
Sbjct: 218 EDILDFFKDFELSEDF--VHVTVNGEGRPTGEAFVEFRNAEDS-RAAMVKDRKTL----G 270
Query: 123 QRYIEVFQCSGEDMNLVLN 141
RYIE+F S E++ L+
Sbjct: 271 SRYIELFPSSVEELEEALS 289
>gi|324527735|gb|ADY48838.1| Heterogeneous nuclear ribonucleoprotein F, partial [Ascaris suum]
Length = 166
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RG+P+ T + +FF +G + + V+D E+G G+ +G+AFV +E
Sbjct: 42 VVRLRGIPFSATVADIKEFF-SGLDVADVVIDKEQG--------GRPSGEAFVRLASKEH 92
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
A+ AL + K ++G RY+E+FRS+ E+ + +P
Sbjct: 93 AELALERSKNNMGSRYVEVFRSSGEEMDNSFYTSRGIP 130
Score = 48.1 bits (113), Expect = 0.013, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF S + V + G+PSGEAF+++ S+ A LA + R NM RY+EVF+
Sbjct: 59 EFFSGLDVADVVIDKEQGGRPSGEAFVRLASKEHAELALE-RSKNNM----GSRYVEVFR 113
Query: 131 CSGEDMN---LVLNGVLPPTSPAISPVGKTLLSPGMLP 165
SGE+M+ G+ PP + I G LSP P
Sbjct: 114 SSGEEMDNSFYTSRGIPPPMAGPIPLRG---LSPASDP 148
Score = 48.1 bits (113), Expect = 0.015, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN 420
GR +GEA VR +EH ++AL+R K+++ RY+EV +++GE+ N
Sbjct: 77 GRPSGEAFVRLASKEHAELALERSKNNMGSRYVEVFRSSGEEMDN 121
>gi|427792669|gb|JAA61786.1| Putative splicing factor hnrnp-f, partial [Rhipicephalus
pulchellus]
Length = 302
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 61/227 (26%)
Query: 347 IWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKR 406
+ S +L I G E V G+ L GR GEA V+F ++ + A+ +HK I R
Sbjct: 14 MCFSPILGLIEGLEIVPN--GITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHR 71
Query: 407 YIEVTKANGEDFINVAG---------------GNNNEAQAF--------LTRGAQVI--- 440
YIE+ K++ ++ + G G + A+ F + RG +
Sbjct: 72 YIEIFKSSLQEIRSAVGMGVPKMMRPMGSARPGPYDRAERFGGGPSRYGMGRGGRNFRGF 131
Query: 441 ------------------------IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV 476
+ MRGLP+ T + + +FF+ N NV
Sbjct: 132 VEEDGYADFGGSGGGARFSATGHFVHMRGLPFRATERDIFEFFQ--PMNPINVH------ 183
Query: 477 LFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
+ + G+ +G+ V F EEA KA+SK K + RYIELF ++T
Sbjct: 184 -LIYEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFLNST 229
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
G++TG+AFV F + A+KA+ KHKE IG RYIE+F+S+ E++ + M +PK
Sbjct: 41 GRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVG--MGVPK 93
>gi|147832351|emb|CAN73277.1| hypothetical protein VITISV_031233 [Vitis vinifera]
Length = 260
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ + + ++DFF+ + + E+ + +G+ TG+AFV F E+
Sbjct: 173 VLRLRGLPFSASKEDIMDFFK-------DFVLSEDSIHMTVNSEGRPTGEAFVEFTNAED 225
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ A++K + ++G RYIELF S+ E+ + + +
Sbjct: 226 SKAAMAKDRMTLGSRYIELFPSSLEELDEAVAR 258
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQM-DSEHSAYLAAQLRHNRNMIFGK 121
E I++F +F + +HM NS+G+P+GEAF++ ++E S A+ R M G
Sbjct: 186 EDIMDFFKDFV--LSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDR----MTLG- 238
Query: 122 KQRYIEVFQCSGEDMN 137
RYIE+F S E+++
Sbjct: 239 -SRYIELFPSSLEELD 253
>gi|145552659|ref|XP_001462005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429842|emb|CAK94632.1| unnamed protein product [Paramecium tetraurelia]
Length = 441
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 380 GEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF----------------INVAG 423
GEA V+ E + HK +D RY+E+ + +++ I
Sbjct: 270 GEAYVQVNSIEDLEYLRTFHKSQMDHRYLEIFNSCFDEYNKAQKSNQFLKKINPKITSEV 329
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
GN NE + + Q ++++RGLP+ T + V FF+ ++ + + F+
Sbjct: 330 GNINEENEYQCQ-QQGVLKLRGLPWSSTEQDVRTFFKNNSKI--------KTIKFLYDDT 380
Query: 484 GKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVLNKT 533
GKA G FVL + E A+K K HK+S+G RYIE+F E KT
Sbjct: 381 GKAKGQCFVLVKNLETAEKLKQKYHKKSLGSRYIEVFICNQREYLACFQKT 431
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 26/163 (15%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEA-GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
Q +++RGLP++CT +I+F E + M ++ LF TG+A+V
Sbjct: 227 QFYLKIRGLPFQCTKSDLINFLEMPRLKKDMLTMKFQQNGLF--------TGEAYVQVNS 278
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E+ + + HK + RY+E+F S E N SN L P +
Sbjct: 279 IEDLEYLRTFHKSQMDHRYLEIFNSCFDEY-------------NKAQKSNQFLKKINPKI 325
Query: 557 SHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFF 599
+ V + + ++ ++LRGLP+ + + FF
Sbjct: 326 TS----EVGNINEENEYQCQQQGVLKLRGLPWSSTEQDVRTFF 364
>gi|268536900|ref|XP_002633585.1| Hypothetical protein CBG05462 [Caenorhabditis briggsae]
Length = 588
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTK---ANGE-DFINVAGGN 425
+C + GR NGEA V F + ++ + + RYIE+ + GE +F A GN
Sbjct: 94 VCTT--GRPNGEAYVEFASTDDAGRGMECDRKEMSNRYIEIFSVPISEGENEFRPDADGN 151
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
E ++R+RG+P+ C + V FF+ ++ G P +
Sbjct: 152 GEENH---------VVRLRGVPWSCKEEDVKQFFQGLEPPPAEIVIG-----GTSGPRPR 197
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+G+AFV F + A KA+ + +G RY+E+F S+ E+ +
Sbjct: 198 PSGEAFVRFTSQAAA-KAMEYNNMHMGTRYVEVFMSSMVELNR 239
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 20/85 (23%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK-----PDGKATGDAFVLF 494
+R+RGLP+ T K + +FF L VK+ G+ G+A+V F
Sbjct: 64 FVRLRGLPFNATEKDIHEFFTG---------------LIVKRVKFVCTTGRPNGEAYVEF 108
Query: 495 EKEEEADKALSKHKESIGIRYIELF 519
++A + + ++ + RYIE+F
Sbjct: 109 ASTDDAGRGMECDRKEMSNRYIEIF 133
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY+ + FF +S + E G +++GDA F+ ++
Sbjct: 329 IYMRGLPYDADHHAIEAFFSPLRVHSIKLGINEAG---------RSSGDAIAEFDSYQDL 379
Query: 501 DKALSKHKESIGIRYIELF--RSTTAEVQQVLNKTMELP 537
L+++ + +G RY+ELF R ++++L K P
Sbjct: 380 QSGLARNNQRMGRRYVELFDTRGAPGPMRRLLWKETSGP 418
>gi|349804479|gb|AEQ17712.1| putative heterogeneous nuclear ribonucleoprotein h1 [Hymenochirus
curtipes]
Length = 154
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 10 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 53
Score = 46.2 bits (108), Expect = 0.053, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 1 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 48
>gi|339245667|ref|XP_003374467.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972254|gb|EFV55937.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 370
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 64/204 (31%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE------------------- 416
GR +GE VRF ++E + AL RH I RYIEV +++ E
Sbjct: 85 GRASGEGFVRFSNKEATERALDRHMEKIGHRYIEVFRSSMEEMDRVTRRPQHMAGWGDGG 144
Query: 417 ---------------------------DF-----INVAGGNNNEAQAFLTRGAQ----VI 440
DF IN GG ++ +F R
Sbjct: 145 GRIVDHDRGYYDTAGYRGGGPGSMYNDDFFTSSPINPRGGYYDQGASFGGRMGGRGAGFA 204
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ TA +++FF +M+ +LF ++ + TG+A V F+ E +A
Sbjct: 205 LHMRGLPYKATANDIMEFFYP-----IKIMNVR--ILFDER--NRPTGEADVEFQCESDA 255
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
+AL K ++++G RYIELF +T
Sbjct: 256 LEALKKDRKTMGERYIELFINTGG 279
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 32/128 (25%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFF-------------------------EAGTENSCN--- 468
+ ++R+RGLP+ + + FF E G+ + +
Sbjct: 6 GEHVVRVRGLPWSSKEEDIRKFFHDCSDIIGIHFTYSKEGRPSGEAYLEFGSADDVDKAL 65
Query: 469 ----VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
+ D + + F + G+A+G+ FV F +E ++AL +H E IG RYIE+FRS+
Sbjct: 66 RHHHISDSIDDIRFGQDNSGRASGEGFVRFSNKEATERALDRHMEKIGHRYIEVFRSSME 125
Query: 525 EVQQVLNK 532
E+ +V +
Sbjct: 126 EMDRVTRR 133
>gi|255645750|gb|ACU23368.1| unknown [Glycine max]
Length = 260
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 28/152 (18%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++CT V +FF + +++D VLFV K GK TG+ F + +
Sbjct: 59 VVRLRGLPFDCTETDVAEFF-----HGLDIVD----VLFVHKG-GKFTGEGFCVLGYPLQ 108
Query: 500 ADKALSKHKESIGIRYIELFRSTTAE-VQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
D AL +++++G RY+E+FRS E + + N+ + + S++ S + S
Sbjct: 109 VDFALQGNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDS- 167
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+H +RLRGLP+ A
Sbjct: 168 ---------AEHT-------GVLRLRGLPFFA 183
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 79/156 (50%), Gaps = 23/156 (14%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQV------------- 439
D AL+ ++ ++ +RY+EV ++ +++ ++A+ R +
Sbjct: 110 DFALQGNRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAE 169
Query: 440 ---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++R+RGLP+ + +++FF+ + E+ + + +G+ G+A+ F
Sbjct: 170 HTGVLRLRGLPFFASKDDIMEFFK-------DFGLPEDSIHIIMNSEGRPFGEAYAEFAS 222
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E++ A+ K + ++G RYIELF S+ E+++ +++
Sbjct: 223 AEDSKAAMVKDRMTLGSRYIELFPSSPGEMEEAISR 258
>gi|395754533|ref|XP_003779794.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Pongo abelii]
Length = 440
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR +GE E + A K+ K I RY+ V K+N + V + ++
Sbjct: 51 GRPSGETFAELESXEVKS-ARKKDKETIGHRYVSVFKSNNVEMDGVLKHSGPDSSVMAND 109
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G LP+EC+ ++++ FF + E N G+ + G++TG+AFV +
Sbjct: 110 GFV-------LPFECSKEEIVQFF-SWLEIVPN------GITLMVDFQGRSTGEAFVQYA 155
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+E A+ L KHKE I YI++F+S+ AEV+
Sbjct: 156 SQEIAENVLEKHKERIRHMYIKIFKSSRAEVR 187
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
GA I++++ P C A +V FF + C + + + + F+ +G+ +G+ F E
Sbjct: 8 GAGFIMKVQRXPXSCPANKVQGFF-----SECKIXNKAQRIHFIYSREGRPSGETFAELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E A K KE+IG RY+ +F+S E+ VL +
Sbjct: 63 SXE-VKSARKKDKETIGHRYVSVFKSNNVEMDGVLKHS 99
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ M GLPY T + +FF +++ G PDG+ TG+A V F E+A
Sbjct: 282 VHMCGLPYRATENDIYNFFXTAQSWRVHIVIG---------PDGRVTGEANVEFVTXEDA 332
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK K + RY+ELF +T
Sbjct: 333 VAAMSKDKANTHHRYVELFLDST 355
>gi|308477529|ref|XP_003100978.1| CRE-HRPF-2 protein [Caenorhabditis remanei]
gi|308264322|gb|EFP08275.1| CRE-HRPF-2 protein [Caenorhabditis remanei]
Length = 621
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 35/179 (19%)
Query: 370 LCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE------------------VT 411
+C + GR NGEA V F Q+ A++ + + RYIE VT
Sbjct: 105 VCTT--GRPNGEAYVEFKTQDDAGKAMENDRKEMSNRYIESEFLIGKQENNSNILVFSVT 162
Query: 412 KANGE-DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
GE +F GN E ++R+RG+P+ C + + FF+ ++
Sbjct: 163 DVEGEFEFRPDPDGNGEENH---------VVRLRGIPWSCKEEDINQFFDGLEPLPAEIV 213
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
G G P + +G+AFV F + A+ A+ + +G RYIE+F S+ E+ +
Sbjct: 214 IGGTG-----GPRSRPSGEAFVRFATQAAAEAAMEYNNRHMGTRYIEVFMSSMVELNRA 267
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ T K + +FF G + V FV G+ G+A+V F+ +++A
Sbjct: 76 VRLRGLPFNATEKDIQEFFSG---------LGVKRVKFVCT-TGRPNGEAYVEFKTQDDA 125
Query: 501 DKALSKHKESIGIRYIE 517
KA+ ++ + RYIE
Sbjct: 126 GKAMENDRKEMSNRYIE 142
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY+ + FF +S + G+ +P +GDA F+ +
Sbjct: 354 IYMRGLPYDADHYAIEAFFSPLRCHSIKL-----GINDTGRP----SGDAIAEFDSYNDL 404
Query: 501 DKALSKHKESIGIRYIELF--RSTTAEVQQVLNKTMELP 537
LSK+ + +G RY+ELF R ++++L K P
Sbjct: 405 QAGLSKNNQRMGRRYVELFDTRGAPGPMRRLLWKETSGP 443
>gi|417409638|gb|JAA51317.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 315
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+FRS+ +E++
Sbjct: 23 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFRSSRSEIK 66
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 165 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 215
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 216 AVAAMSKDKNNMQHRYIELFLNST 239
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH 399
+CP V+ L +P G+ L + GR GEA V+F QE + ALK+H
Sbjct: 1 ICPWVEG------LEIVPN--------GITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 46
Query: 400 KHHIDKRYIEVTKAN 414
K I RYIE+ +++
Sbjct: 47 KERIGHRYIEIFRSS 61
>gi|405977012|gb|EKC41485.1| Dual specificity mitogen-activated protein kinase kinase 5
[Crassostrea gigas]
Length = 672
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 386 FIDQEHRDMAL--KRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRM 443
F+D +D+A K + I RYIE+ + DF + G + ++++
Sbjct: 65 FVDINKQDLAKAKKYNLREIGNRYIEILEET--DFKRIYPGYTPPT----PQEKGTLVKL 118
Query: 444 RGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKA 503
+GLP+ CT + + FF +G E + G++ K TG+A+V F +E A+KA
Sbjct: 119 KGLPFGCTKQDIATFF-SGFEIA------PHGIMKPVKRHASLTGEAYVKFASKEIAEKA 171
Query: 504 LSKHKESIGIRYIELFRSTTAEVQQVLN 531
L++H E +G RYI ++ + EV ++
Sbjct: 172 LTRHNEYMGSRYINVYPTDALEVDHKMS 199
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE-NSCNVMDGEEGVLFVKKPDGKA 486
E QA + + I +RGLPY+ TA V+ FF+ +V+ G++GV +
Sbjct: 5 ENQADKQQNNKCTIMLRGLPYKATAADVLRFFKVPVMFVDVDVLGGKDGVHL----HART 60
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
G FV K++ A KA + IG RYIE+ T
Sbjct: 61 MGTCFVDINKQDLA-KAKKYNLREIGNRYIEILEET 95
>gi|417409472|gb|JAA51238.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 300
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
G++TG+AFV F +E A+KAL KHKE IG RYIE+FRS+ +E++ +
Sbjct: 23 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFRSSRSEIKGFYD 70
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 150 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 200
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 201 AVAAMSKDKNNMQHRYIELFLNST 224
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRH 399
+CP V+ L +P G+ L + GR GEA V+F QE + ALK+H
Sbjct: 1 ICPWVEG------LEIVPN--------GITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 46
Query: 400 KHHIDKRYIEVTKAN 414
K I RYIE+ +++
Sbjct: 47 KERIGHRYIEIFRSS 61
>gi|428180581|gb|EKX49448.1| hypothetical protein GUITHDRAFT_104977 [Guillardia theta CCMP2712]
Length = 443
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
+GA +++RGLPY T V++FF+ V+ EE + F +G+ +G+A+V F
Sbjct: 351 KGATTKVKLRGLPYGATTADVLNFFKG-----LGVL--EESITFGINSEGRPSGEAWVSF 403
Query: 495 EKEEEADKAL-SKHKESIGIRYIELF 519
+ E+A KA+ K + +G RY+ELF
Sbjct: 404 NRIEDARKAVREKDRHHMGDRYVELF 429
>gi|159485042|ref|XP_001700558.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158272198|gb|EDO98002.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 229
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++M+GLP++ + + +I FF + + E V K PDG+ G+AFV+FE +E
Sbjct: 35 VVKMKGLPFKGSKEDIIKFFAGFSLRT-------EHVFLRKHPDGRPNGEAFVVFENSDE 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
A +A K +E+ G E F V L+ ++P + ++ NG+ ++
Sbjct: 88 ARRATQKDRETFG----EKFGDRYVRVYPTLDS--DIP---DMQAAPNGVQ----LVVRS 134
Query: 560 AQVPVPYLPQHIITS--GTRKDCIRLRGLPYEALCILMDIFFV 600
P + + G R ++++G+P++A + + FF
Sbjct: 135 DNKPTGEKDHKVFSEKFGDRYGVLKMKGIPFKATAMDVRKFFA 177
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 28/165 (16%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKH----HIDKRYIEVTKANGEDFINVAGGNN----- 426
GR NGEA V F + + A ++ + RY+ V D ++ N
Sbjct: 72 GRPNGEAFVVFENSDEARRATQKDRETFGEKFGDRYVRVYPTLDSDIPDMQAAPNGVQLV 131
Query: 427 ----------NEAQAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+ + F + +++M+G+P++ TA V FF N E
Sbjct: 132 VRSDNKPTGEKDHKVFSEKFGDRYGVLKMKGIPFKATAMDVRKFF-------ANYKIKPE 184
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GV F+ DG+ TG AF+ FE +EA +A+ K + G Y + F
Sbjct: 185 GVSFIMHADGRPTGMAFIEFETPQEAVRAMEKDRAKFGPEYGDRF 229
>gi|241999526|ref|XP_002434406.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497736|gb|EEC07230.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 1026
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP-DGKATGDAFVLFEKE 497
++ M+GLPY C+ V+ FF + N++D LFV+ +G+ATG FV F +
Sbjct: 633 TVVVMKGLPYSCSETDVLQFF-----SGLNILD-----LFVEHDHNGRATGTGFVEFASK 682
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+ D A++ H+ +G RYIEL T + N
Sbjct: 683 RDFDAAMNMHRRKMGHRYIELTVGTRDSMHLARN 716
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+IIRM+ LP+ + + +F+ + +G GV V G GDAF+ F +
Sbjct: 2 SIIIRMQNLPWAANSLDIRRYFQG-----LGIPEG--GVHIV----GGDKGDAFIAFSTD 50
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+A +A+ + I I+L S+ AE+Q+V+++
Sbjct: 51 EDARQAMERDAGKIKEVRIKLLLSSRAEMQRVIDQA 86
>gi|219111791|ref|XP_002177647.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410532|gb|EEC50461.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+R+RGLP+ T + FF +E V+ + DG+ATG+A++ F ++
Sbjct: 156 FLRVRGLPFSATRDDIFKFF-------LGYNPTQESVVLTYRNDGRATGEAYIGFATADD 208
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
+ +A+ H+ +G RY+ELF S E + L +
Sbjct: 209 SKRAMELHRRVMGSRYVELFISNKDEHGRALAR 241
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
R+R LPY+ + ++ F+ L V + GDAFV+F +
Sbjct: 6 RLRNLPYDAALEDILILFQG---------------LVVIDVVISSQGDAFVIFANPMDFQ 50
Query: 502 KALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTS----------------- 544
AL + +++IG R++E+ +T +E + K +++ S
Sbjct: 51 MALQRDRQTIGRRFVEIVAATRSEYYDAIAKKSAGESASAMASLWGGSQGGMNSLPPQGG 110
Query: 545 -----SNNGLSAQQPMLSHLAQ-----VPVPYLPQHIITSGTRKDCIRLRGLPYEALCIL 594
++GL P L+ +++ P+ I G +R+RGLP+ A
Sbjct: 111 YGEGMQHHGLLGMGPRLTGMSRQGGIHTPLQKRTGGGIQVGEHTGFLRVRGLPFSATRDD 170
Query: 595 MDIFFVG 601
+ FF+G
Sbjct: 171 IFKFFLG 177
>gi|156401535|ref|XP_001639346.1| predicted protein [Nematostella vectensis]
gi|156226474|gb|EDO47283.1| predicted protein [Nematostella vectensis]
Length = 90
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
N G+N++ Q I+RM GLP+E + + + FF S +++ + G
Sbjct: 1 NSDNGSNSQDQ----EATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSG---- 52
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
K GK TG AFV+F+ +A KAL + IG RYIEL
Sbjct: 53 -KNQGKNTGVAFVVFKSNNDASKALKMDRSYIGHRYIEL 90
>gi|193786713|dbj|BAG52036.1| unnamed protein product [Homo sapiens]
Length = 568
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 64 AGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRN 116
Query: 497 EEEADKALSKHKESIGIRYIEL 518
E + AL +HK+ +G R+I++
Sbjct: 117 EVDYKAALCRHKQYMGNRFIQV 138
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 104 GKATGEGFVEFRNEVDYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 163
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 164 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 216
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 217 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 263
>gi|402586835|gb|EJW80772.1| hypothetical protein WUBG_08317 [Wuchereria bancrofti]
Length = 195
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 21/115 (18%)
Query: 77 VYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNR----------NMIFGKKQRYI 126
++ GVHMVYN+QG PSGEAFIQMDSE SA AA L HN+ +F +++
Sbjct: 1 MFHGVHMVYNAQGHPSGEAFIQMDSEMSAATAAALAHNKIYANRKETTPRPLFPQRKTNF 60
Query: 127 EVFQCS---------GEDMNL--VLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+V GE + ++ ++PP +P P SP + P SQP
Sbjct: 61 DVIHVELANLSHPNGGERKTVQSLVPAIVPPFTPLYWPCLSPPTSPCIYPLQSQP 115
>gi|7739445|gb|AAF68850.1|AF132362_1 hnRNP 2H9B [Homo sapiens]
gi|7739437|gb|AAF68844.1| hnRNP 2H9B [Homo sapiens]
Length = 297
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
G++TG+AFV F +E A+ AL KHKE IG RYIE+FRS+ +E++ +
Sbjct: 5 GRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYD 52
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 147 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 197
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 198 AVAAMSKDKNNMQHRYIELFLNST 221
>gi|159163272|pdb|1WEL|A Chain A, Solution Structure Of Rna Binding Domain In Np_006038
Length = 124
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
A + ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F
Sbjct: 24 AGFCVYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRN 76
Query: 497 EEEADKALSKHKESIGIRYIEL 518
E + AL +HK+ +G R+I++
Sbjct: 77 EADYKAALCRHKQYMGNRFIQV 98
>gi|383276062|dbj|BAM09220.1| heterogenous nuclear ribonucleoprotein F, partial [Ursus thibetanus
japonicus]
Length = 150
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 69 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 119
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 120 VAAMSKDRANMQHRYIELFLNST 142
>gi|344252227|gb|EGW08331.1| Heterogeneous nuclear ribonucleoprotein F [Cricetulus griseus]
Length = 185
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 61 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 111
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 112 VAAMSKDRANMQHRYIELFLNST 134
>gi|18605870|gb|AAH23162.1| Hnrpf protein, partial [Mus musculus]
Length = 188
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 64 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 114
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 115 VAAMSKDRANMQHRYIELFLNST 137
>gi|51476543|emb|CAH18256.1| hypothetical protein [Homo sapiens]
Length = 194
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 113 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 163
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 164 VAAMSKDKANMQHRYVELFLNSTA 187
>gi|427788569|gb|JAA59736.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 1004
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
TR + +++ M+GLPY + + V+ FF + NV+D +L G+ATG AFV
Sbjct: 521 TRDSDMVVVMKGLPYNTSEQDVLQFF-----SGLNVLD----ILVEHDRSGRATGMAFVE 571
Query: 494 FEKEEEADKALSKHKESIGIRYIEL 518
F + + + A+S + IG RYIEL
Sbjct: 572 FGDKRDFETAMSMQRRKIGHRYIEL 596
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+IIR++ LP+ + + +F+ N+ +G GV V G GDAF+ F +
Sbjct: 2 SIIIRLQNLPWAANSLDIRRYFQG-----LNIPEG--GVHIV----GGEKGDAFIAFGSD 50
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+A +A+ + I I+L S+ AE+Q+++++
Sbjct: 51 EDARQAMERDGGKIKEVRIKLLLSSRAEMQRIIDQA 86
>gi|427788565|gb|JAA59734.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 1011
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
TR + +++ M+GLPY + + V+ FF + NV+D +L G+ATG AFV
Sbjct: 521 TRDSDMVVVMKGLPYNTSEQDVLQFF-----SGLNVLD----ILVEHDRSGRATGMAFVE 571
Query: 494 FEKEEEADKALSKHKESIGIRYIEL 518
F + + + A+S + IG RYIEL
Sbjct: 572 FGDKRDFETAMSMQRRKIGHRYIEL 596
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+IIR++ LP+ + + +F+ N+ +G GV V G GDAF+ F +
Sbjct: 2 SIIIRLQNLPWAANSLDIRRYFQG-----LNIPEG--GVHIV----GGEKGDAFIAFGSD 50
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+A +A+ + I I+L S+ AE+Q+++++
Sbjct: 51 EDARQAMERDGGKIKEVRIKLLLSSRAEMQRIIDQA 86
>gi|159468195|ref|XP_001692268.1| hypothetical protein CHLREDRAFT_189395 [Chlamydomonas reinhardtii]
gi|158278454|gb|EDP04218.1| predicted protein [Chlamydomonas reinhardtii]
Length = 913
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV-QQVLNK 532
+G+ FV +PDG+ +G AF F +EEA KALSK+ E IG RY+ L AE+ +QV
Sbjct: 644 KGISFVYEPDGRPSGLAFAEFVSKEEALKALSKNGEYIGQRYVRLLHVPRAEMEEQVRLG 703
Query: 533 TMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLP 568
T+ +P + S + +QQ + ++A PV +P
Sbjct: 704 TLAIPGAAAKIRSRM-MRSQQRNMGYMAG-PVQLMP 737
>gi|380806713|gb|AFE75232.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca mulatta]
Length = 118
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 27 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 77
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 78 VAAMSKDKANMQHRYVELFLNSTA 101
>gi|380806715|gb|AFE75233.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca mulatta]
Length = 112
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 27 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 77
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 78 VAAMSKDKANMQHRYVELFLNSTA 101
>gi|301632397|ref|XP_002945272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like, partial
[Xenopus (Silurana) tropicalis]
Length = 218
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ G++TG+AFV F +E A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 7 GITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEIR 59
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 7 GITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 54
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF T ++ G DG+ATG+A V F E+
Sbjct: 156 FVHMRGLPFRATESDIANFFSPLTPIRVHIDVG---------ADGRATGEADVEFATHED 206
Query: 500 ADKALSKHKESI 511
A A+SK K ++
Sbjct: 207 AVAAMSKDKNNM 218
>gi|442746139|gb|JAA65229.1| Putative splicing factor hnrnp-f, partial [Ixodes ricinus]
Length = 206
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 57/195 (29%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG------------- 423
R GEA V+F ++ + A+ +HK I RYIE+ K++ ++ + G
Sbjct: 1 RSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVGMGVPKMMRPLGTA 60
Query: 424 --GNNNEAQAF-------LTRGAQ--------------------------VIIRMRGLPY 448
G + F + RG + + MRGLP+
Sbjct: 61 RPGPYDRGDRFGGPSRYGMGRGGRNFRGFVEEDGYGDFGGSGGARYSATGHFVHMRGLPF 120
Query: 449 ECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHK 508
T + + +FF+ N M+ V + + G+ +G+ V F EEA KA+SK K
Sbjct: 121 RATERDIFEFFQP-----MNPMN----VHLIYEDSGRPSGECDVEFATHEEAVKAMSKDK 171
Query: 509 ESIGIRYIELFRSTT 523
+ RYIELF ++T
Sbjct: 172 AHMQHRYIELFLNST 186
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
++TG+AFV F + A+KA+ KHKE IG RYIE+F+S+ E++ + M +PK
Sbjct: 1 RSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVG--MGVPK 52
>gi|307181800|gb|EFN69243.1| hypothetical protein EAG_13920 [Camponotus floridanus]
Length = 69
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLI 46
P +VATAGLQGN LGSDE+EI LL+YV+I+ NK+ +
Sbjct: 15 PNILVALYVATAGLQGNALGSDEEEITLLVYVLINELQNKIFM 57
>gi|156401533|ref|XP_001639345.1| predicted protein [Nematostella vectensis]
gi|156226473|gb|EDO47282.1| predicted protein [Nematostella vectensis]
Length = 75
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+I+M+GLP+E T++ + FF+ + E+ + DGKA+G +F +F ++
Sbjct: 3 VVIKMKGLPFEATSRDIQMFFDGLSLR-------EKDIHLAANKDGKASGISFAVFNVDD 55
Query: 499 EADKALSKHKESIGIRYIEL 518
+A KA+ + + +G RYIEL
Sbjct: 56 DARKAMYRTGKYMGKRYIEL 75
>gi|118401869|ref|XP_001033254.1| hypothetical protein TTHERM_00419990 [Tetrahymena thermophila]
gi|89287602|gb|EAR85591.1| hypothetical protein TTHERM_00419990 [Tetrahymena thermophila SB210]
Length = 1468
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R+RGLPY C K++ +FF+ V DG + V + + K TG++F++ + +++
Sbjct: 1285 ILRIRGLPYSCKTKEIYEFFKDFEI----VQDGVKRVYNYQ--EQKQTGESFIILKNKDQ 1338
Query: 500 ADKALSK-HKESIGIRYIELFRSTTAE 525
+A K H E I RYIE+F+S E
Sbjct: 1339 VREAKQKLHGERIFQRYIEVFQSDPNE 1365
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQP-SGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
+ I EF +F IV GV VYN Q Q +GE+FI + ++ A Q H IF
Sbjct: 1297 TKEIYEFFKDFE--IVQDGVKRVYNYQEQKQTGESFIILKNKDQVREAKQKLHGE-RIF- 1352
Query: 121 KKQRYIEVFQCS-GEDMNLVLNGVLPPT 147
QRYIEVFQ E ++ +++ +LP +
Sbjct: 1353 --QRYIEVFQSDPNEFLDYLIDKILPQS 1378
>gi|255077464|ref|XP_002502372.1| predicted protein [Micromonas sp. RCC299]
gi|226517637|gb|ACO63630.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Query: 404 DKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQV-------IIRMRGLPYECTAKQVI 456
D R + + A E+F A G A+L I+R+R +PYE T V+
Sbjct: 74 DGRTVRASLATDEEFERAAAG------AWLPPRPPPGDPSLCGILRLRSVPYEATKTDVV 127
Query: 457 DFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE-EADKALSKHKESIGIRY 515
+FF + E+ V V + +TG+AFV F ++ +AL K + +G R
Sbjct: 128 NFFYG-------MGVTEDKVKIVLDANSASTGEAFVEFSGDDANISQALMKDRAVLGSRC 180
Query: 516 IELFRSTTAEVQQV 529
+E+FRS+ EVQ++
Sbjct: 181 VEMFRSSLEEVQRM 194
>gi|148701753|gb|EDL33700.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_c [Mus
musculus]
Length = 288
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+
Sbjct: 129 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHED 179
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 180 AVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 234
>gi|148701751|gb|EDL33698.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_a [Mus
musculus]
Length = 311
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+
Sbjct: 129 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHED 179
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 180 AVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 234
>gi|66361862|ref|XP_627895.1| CG8205/fusilli (animal)- like, 2x RRM domains, involved in RNA
metabolism [Cryptosporidium parvum Iowa II]
gi|46227584|gb|EAK88519.1| CG8205/fusilli (animal)- like, 2x RRM domains, involved in RNA
metabolism [Cryptosporidium parvum Iowa II]
Length = 569
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 25/197 (12%)
Query: 348 WLSLLLNTIPGYEQVLGLGG--VALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHID 404
W + +L+ I + + + +A+ + G+ GEA V + +++L H +
Sbjct: 325 WKAAVLDIIAFFNPICRISSYDIAISYNKDGKMTGEAYVLLPSIKAYELSLTLLHGKRMG 384
Query: 405 KRYIEVTKANGEDFI-------------NVAGGNNNEA-QAFLTRGAQVIIRMRGLPYEC 450
KR+IEV ++ ++F+ N + N+N+ + R ++R+RGLP+
Sbjct: 385 KRWIEVLPSSTKEFLICLQITSLKKQNQNPSIFNDNKIIDRYYNRS---VLRLRGLPWST 441
Query: 451 TAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF-EKEEEADKALSKHKE 509
T +++ FF +G N D G+ + +A+G+A+++ K + D ++
Sbjct: 442 TEIEIVQFFISGGIYGLNASDVFLGI----TENQRASGEAWIILPHKCDAFDAQRILNRR 497
Query: 510 SIGIRYIELFRSTTAEV 526
IG RYIE+F S+ E+
Sbjct: 498 VIGKRYIEVFISSFQEL 514
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP++ +I FF C + + + + K DGK TG+A+VL +
Sbjct: 317 VVRLRGLPWKAAVLDIIAFFNP----ICRISSYDIAISYNK--DGKMTGEAYVLLPSIKA 370
Query: 500 ADKALS-KHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+ +L+ H + +G R+IE+ S+T E L T L K N
Sbjct: 371 YELSLTLLHGKRMGKRWIEVLPSSTKEFLICLQIT-SLKKQN------------------ 411
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
Q P + II + +RLRGLP+ I + FF+
Sbjct: 412 --QNPSIFNDNKIIDRYYNRSVLRLRGLPWSTTEIEIVQFFIS 452
>gi|67971142|dbj|BAE01913.1| unnamed protein product [Macaca fascicularis]
Length = 286
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+
Sbjct: 127 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHED 177
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 178 AVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 232
>gi|358342654|dbj|GAA27695.2| heterogeneous nuclear ribonucleoprotein F/H [Clonorchis sinensis]
Length = 295
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 419 INVAGGN--------NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
+NV G N +N+ +R Q IRMRGLP+ T ++DFF + +
Sbjct: 191 LNVNGCNITCTMPAVDNQTSTGASR-TQRHIRMRGLPFAATVNDILDFFRPIQPLTVTMR 249
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
+ G KP+G A V F E+ +A+ +HK +G RYIELF S
Sbjct: 250 THKNG-----KPNGMAD----VYFATVEDTKEAMKRHKAPMGFRYIELFSS 291
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+ GLP+ T Q+ FFE G E ++G+ + G+ TG+AFV F E A
Sbjct: 15 LRLFGLPFSVTKAQIQAFFE-GFEIV------KDGIGLLTDHHGRPTGEAFVQFVSPEVA 67
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL--------PKNNSLTSSN 546
A KHK I RY+E+ ST Q + + M + PK+++ T +N
Sbjct: 68 RLAAGKHKHLIDGRYVEISFSTLKAANQAIERQMYINMGMVPPDPKSSTRTWTN 121
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVT 411
G+ L GR GEA V+F+ E +A +HKH ID RY+E++
Sbjct: 42 GIGLLTDHHGRPTGEAFVQFVSPEVARLAAGKHKHLIDGRYVEIS 86
>gi|321446634|gb|EFX60905.1| hypothetical protein DAPPUDRAFT_122743 [Daphnia pulex]
Length = 169
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++ MRGLP+ + ++ FF +E + + + + DG+ +G+A V F
Sbjct: 92 TLVIMRGLPFTASCSDILQFFSGFSELTPDCIQ------IHRNNDGRPSGEAVVNFPNRA 145
Query: 499 EADKALS-KHKESIGIRYIELF 519
EA++A++ K++++IG RYIELF
Sbjct: 146 EAERAIAEKNRQNIGTRYIELF 167
>gi|209880052|ref|XP_002141466.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557072|gb|EEA07117.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 626
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGGNN-----NEA 429
R +GEA V ++ + + + H + + KR+IEV ++ DF+ N ++
Sbjct: 344 NRMSGEAYVVLSSKDDMKVCISQLHGNRMGKRWIEVLPSSYGDFLECKKSNEIFQKLSDK 403
Query: 430 QAFLTR---------GAQVIIRMRGLPYECTAKQVIDFFE-AGTENSCNVMDGEEGVLFV 479
FL+ + ++R+RGLP+ T +++ FFE AG N + V
Sbjct: 404 IRFLSNPLLDQDSEYVNRPVLRLRGLPWSTTEFEIVQFFETAGVRNI-----SVDNVFLG 458
Query: 480 KKPDGKATGDAFVLFEKE---EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
+ + +G+A V+ + E + L ++ IG RYIE+F S+ EV M L
Sbjct: 459 YTTNSRPSGEACVVLPEWCNLNEVQRVL--NRRVIGKRYIEVFISSYQEVHSFKKSAMSL 516
Query: 537 PKNNS 541
K S
Sbjct: 517 NKGKS 521
>gi|226501122|ref|NP_001148833.1| RNA binding protein [Zea mays]
gi|195622468|gb|ACG33064.1| RNA binding protein [Zea mays]
Length = 268
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 28/152 (18%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT- 434
GR GEA V F + AL R++ ++ +RY+EV + +++ + ++ F +
Sbjct: 122 GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKQEYYSAIANEVSQGGYFESE 181
Query: 435 -----------------RGA---QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
+G+ ++++RGLPY T + +I FF EE
Sbjct: 182 YRRSSPPPRPPKKPAEDKGSMEYTEVLKLRGLPYSATTEDIIKFF-------LEYELTEE 234
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK 506
V + DGKATG+AFV F E A ++
Sbjct: 235 NVHIAIRSDGKATGEAFVEFPTAEVAKTRCAR 266
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +
Sbjct: 89 VRLRGLPFDCNDIDICKFFVG-----LDIVD----CLLVNK-NGRFTGEAFVVFPTAMQT 138
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
+ AL ++++++G RY+E+FR E + E+ + S S A
Sbjct: 139 EFALHRNRQNMGRRYVEVFRCKKQEYYSAIAN--EVSQGGYFESEYRRSSPPPRPPKKPA 196
Query: 561 QVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV 600
+ S + ++LRGLPY A + FF+
Sbjct: 197 EDK---------GSMEYTEVLKLRGLPYSATTEDIIKFFL 227
>gi|242017935|ref|XP_002429439.1| hypothetical protein Phum_PHUM433190 [Pediculus humanus corporis]
gi|212514371|gb|EEB16701.1| hypothetical protein Phum_PHUM433190 [Pediculus humanus corporis]
Length = 56
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLI 46
M P Y CVF +ATAG QG LGSDE+EI+ +IY++ID +NK I
Sbjct: 10 MSGPPYLCVFHLATAGQQGPNLGSDEEEIVAMIYIVIDKTLNKFKI 55
>gi|159163284|pdb|1WEZ|A Chain A, Solution Structure Of Rrm Domain In Heterogeneous Nuclear
Ribonucleoprotein H'
Length = 102
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 18 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 68
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 69 VAAMAKDKANMQHRYVELFLNSTA 92
>gi|401395936|ref|XP_003879715.1| putative RRM domain-containing protein [Neospora caninum Liverpool]
gi|325114122|emb|CBZ49680.1| putative RRM domain-containing protein [Neospora caninum Liverpool]
Length = 246
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG--EEGVLFVKKPDGKATGDAFVLFEK 496
+R+RGL Y T + FFE + + G EE + ++ DG+ TG A V FE
Sbjct: 139 ATLRLRGLSYRATTDDIAQFFEGYS------LAGPPEEAIQLHRRMDGRPTGWASVYFET 192
Query: 497 EEEADKAL-SKHKESIGIRYIELFRS-TTAEVQQVLNKTMELPKNNSLTSSNN 547
E+EA +A KH+ + RYIE+F + T E++ + T+ N +N
Sbjct: 193 EQEARRAKQDKHRSYLHGRYIEIFINFETGELEWIHQPTLSENVNRKHHGKDN 245
>gi|307196546|gb|EFN78076.1| GPI mannosyltransferase 3 [Harpegnathos saltator]
Length = 658
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVL 45
V +VATAGLQGN LGSDE+EI LL+YV+ID NK +
Sbjct: 618 VLYVATAGLQGNALGSDEEEITLLVYVLIDVLQNKYI 654
>gi|194389894|dbj|BAG60463.1| unnamed protein product [Homo sapiens]
Length = 159
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 21 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 71
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 72 VAAMSKDKANMQHRYVELFLNSTA 95
>gi|334321772|ref|XP_001372905.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 362
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 372 LSAFGRRNGEAIVRFIDQEHRDMALK-RHKHHIDKRYIEVTKANGE---DF-INVAGGNN 426
L + R+ E ++ + E D ++ R ++ YI ++N + DF I+ N
Sbjct: 137 LGPYDRQGPELRLKTVSGEGSDKGMRPRVFERLNGSYICKNRSNDDPSIDFNISTRRIPN 196
Query: 427 NEAQAFLTRGAQV--IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDG 484
N F+ A + MRGLPY+ T + FF ++ GE DG
Sbjct: 197 NRFGDFIFHNATCHHWVHMRGLPYKATVNDIYHFFSPLCPLRVHIEIGE---------DG 247
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
KATG+A V F E+A A+ K K + RYIELF +TA+
Sbjct: 248 KATGEADVDFVTHEDAVAAMVKEKTYMQHRYIELFLYSTAK 288
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ +RGLP+ C K+ I F +G E G++ GK+TG A V F +E
Sbjct: 42 LLCIRGLPFGCN-KETIRHFFSGLETV------PSGIILPVDFQGKSTGTALVQFASQEA 94
Query: 500 ADKALSKHKESIGIRYIE 517
A+ A+ KHK RY+E
Sbjct: 95 AEIAIRKHKGRPEPRYLE 112
>gi|417409228|gb|JAA51131.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 271
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 113 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 163
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 164 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 217
>gi|324501689|gb|ADY40749.1| Heterogeneous nuclear ribonucleoprotein H2 [Ascaris suum]
Length = 152
Score = 53.5 bits (127), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++++ RGLP+ CT +++ FF+ + + K D + +G+AFV F E
Sbjct: 55 LVVKCRGLPWSCTEEEIRIFFQPADRSIVKIT-------LTKNRDARPSGEAFVAFNNNE 107
Query: 499 EADKALSKHKESIGIRYIELFRSTT 523
+ + AL++ K+ +G RYIE++ T
Sbjct: 108 DYEYALTRDKQHMGKRYIEVWIGLT 132
>gi|112491343|pdb|2HGN|A Chain A, Nmr Structure Of The Third Qrrm Domain Of Human Hnrnp F
gi|297787489|pdb|2KG1|A Chain A, Structure Of The Third Qrrm Domain Of Hnrnp F In Complex
With A Agggau G-Tract Rna
Length = 139
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 49 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 99
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 100 VAAMSKDRANMQHRYIELFLNST 122
>gi|213514986|ref|NP_001135185.1| Heterogeneous nuclear ribonucleoprotein H3 [Salmo salar]
gi|209149642|gb|ACI32984.1| Heterogeneous nuclear ribonucleoprotein H3 [Salmo salar]
Length = 204
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF T ++ G P+GK+TG+A V F E+A
Sbjct: 100 VHMRGLPFRATEGDIANFFSPLTPVRVHIDFG---------PNGKSTGEADVEFRSHEDA 150
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K + RYIELF ++TA
Sbjct: 151 VSAMSKDKNHMQHRYIELFLNSTA 174
>gi|432909266|ref|XP_004078148.1| PREDICTED: RNA-binding protein 12B-like [Oryzias latipes]
Length = 631
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 43/278 (15%)
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYI 408
S+ N I + + L + L + G+ NG+A VRF+ +E ALK++ +I RY+
Sbjct: 141 FSVTENQICEFFKGLETNEIVLLKNHRGQNNGKAFVRFVTREDAMEALKKNMEYIGTRYV 200
Query: 409 EVTKANGEDFINVAG----GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFE-AGT 463
EV ++ G G N + RG R R P+ + ++ A
Sbjct: 201 EVCTTTINEWYRATGRMPMGLNVDDN--FERGRMPDHRQRISPHTRSRSPMMQRHAPASE 258
Query: 464 ENSCNVMDG--------------------EEGVLFVKKPDGKATGDAFVLFEKEEEADKA 503
E C ++D + +L + P GK T AFVLF+ + ++A
Sbjct: 259 EEYCVLLDNLSYGMEKEDIKQMFRGVKLDNDQILHLTDPAGKRTRSAFVLFKSFHDYNRA 318
Query: 504 LSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVP 563
+S K+ + R++ + R + E L ++ +N ++ N S Q+ SH
Sbjct: 319 ISNEKKLLYNRWVNI-RPISRENMLALLQS----QNTAIGPPENNQSYQERPPSH----- 368
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P P + K C+ ++ LP++ + + FF G
Sbjct: 369 -PRDPYE-----SEKACVYVKNLPFDVRKVEIMDFFHG 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ + GLP+ T Q+ +FF+ N ++ +K G+ G AFV F E+
Sbjct: 133 VVFLNGLPFSVTENQICEFFKGLETNE---------IVLLKNHRGQNNGKAFVRFVTRED 183
Query: 500 ADKALSKHKESIGIRYIELFRSTTAE 525
A +AL K+ E IG RY+E+ +T E
Sbjct: 184 AMEALKKNMEYIGTRYVEVCTTTINE 209
>gi|74222440|dbj|BAE38120.1| unnamed protein product [Mus musculus]
Length = 272
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 114 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 164
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 165 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 218
>gi|94536671|ref|NP_001035439.1| uncharacterized protein LOC678601 [Danio rerio]
gi|92096562|gb|AAI15345.1| Zgc:136953 [Danio rerio]
gi|190338538|gb|AAI63730.1| Zgc:136953 [Danio rerio]
Length = 209
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T V FF T ++ G P+GK+TG+A V F E+
Sbjct: 104 FVHMRGLPFRATESDVAHFFGPLTPVRVHIDMG---------PNGKSTGEADVEFRSHED 154
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
A A+SK K + RYIELF ++T+
Sbjct: 155 AVSAMSKDKNHMQHRYIELFLNSTS 179
>gi|291232395|ref|XP_002736145.1| PREDICTED: RNA binding motif protein 12-like [Saccoglossus
kowalevskii]
Length = 983
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 52/278 (18%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYI-------EVTKANGEDFI 419
G+ + +FG+R G+ V+F +Q ALKR ++ RYI +V + G DF
Sbjct: 498 GIRISTDSFGKRTGDGFVKFRNQMDHQEALKRSMKYMGTRYIKVIPCPEKVWASCGADFE 557
Query: 420 ------------------NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
N + +++ +++ + + +RGLP+ + DFF+
Sbjct: 558 RRHSRDAFHSDRQHQDAPNFSSRSSHRSRSRSPIRDSLCVSLRGLPFVTNTSHIFDFFKG 617
Query: 462 GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF-- 519
+V EE + G G +V F+ + KAL+++++ IG R++ +
Sbjct: 618 -----LDVP--EENIFLEVNEKGNCKGAGYVEFKTVHDFRKALARNRQYIGTRFVTVMAI 670
Query: 520 --RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL--------AQVPVPYLPQ 569
A+++ N + + ++ ++ + P+ + + P+
Sbjct: 671 AKEDMKAQIRSHPNWMRTVSQMSTAPATPTSDDKKLPLEDKIEPPKDDVKEKGSSENAPK 730
Query: 570 HIITSGTRKDCIRLRGLPY-----EALCILMDIFFVGQ 602
I GT CIR++ +PY E L L I V Q
Sbjct: 731 SITDEGT---CIRMKNIPYASNRGEILHFLSGIAIVHQ 765
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKR-------------HKHHIDKRYIEVTKANGEDFI 419
S G ++G++ R+ DQ HR R H+HH +R + N +
Sbjct: 395 SGSGSKHGDS-SRYNDQRHRGSHDDRGGRSRSESQSDSSHRHH--ERSFMDDRPNRPQYR 451
Query: 420 NVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
+ NE + G +R++GLP+ + + + FF AG E +D +G+
Sbjct: 452 REDSESFNEEKRRGDDG--FCVRLQGLPFSSSDENIKKFF-AGLE-----ID-RDGIRIS 502
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
GK TGD FV F + + +AL + + +G RYI++
Sbjct: 503 TDSFGKRTGDGFVKFRNQMDHQEALKRSMKYMGTRYIKV 541
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IIR++GLP+ +A V FF+ T + DG GV V G +GDAF+ F +E
Sbjct: 3 IIIRLQGLPWAASALDVRHFFKGLT-----IPDG--GVHIV----GGESGDAFIAFGGDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
EA KA+ + + I L S+ +E+Q V+
Sbjct: 52 EARKAMLITNQPLCGSKITLMLSSKSEMQNVI 83
>gi|76155975|gb|AAX27224.2| SJCHGC06533 protein [Schistosoma japonicum]
Length = 249
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+RMRGLPY T K+ ID F A + N+ + F + TG+A V F +EA
Sbjct: 79 VRMRGLPYSAT-KEDIDRFLAPLQ-PVNIR-----MRFNAA--SRPTGEAIVDFASHDEA 129
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
+A+ K +E IG RYIELF ++T
Sbjct: 130 KEAMKKDREKIGSRYIELFLAST 152
>gi|417409033|gb|JAA51043.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 251
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 113 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 163
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 164 VAAMSKDKANMQHRYVELFLNSTA 187
>gi|308453513|ref|XP_003089469.1| hypothetical protein CRE_14401 [Caenorhabditis remanei]
gi|308240262|gb|EFO84214.1| hypothetical protein CRE_14401 [Caenorhabditis remanei]
Length = 264
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 34/175 (19%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE------------- 409
LG+ V + GR NGEA V F Q+ A++ + + RYIE
Sbjct: 97 LGVKRVKFVCTT-GRPNGEAYVEFKTQDDAGKAMENDRKEMSNRYIESEFLIGKQENNSN 155
Query: 410 -----VTKANGE-DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
VT GE +F GN E ++R+RG+P+ C + + FF+
Sbjct: 156 ILVFSVTDVEGEFEFRPDPDGNGEENH---------VVRLRGIPWSCKEEDINQFFDGLE 206
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
++ G G P + +G+AFV F + A+ A+ + +G R++ L
Sbjct: 207 PLPAEIVIGGTG-----GPRSRPSGEAFVRFATQAAAEAAMEYNNRHMGTRWVSL 256
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ T K + +FF G + V FV G+ G+A+V F+ +++A
Sbjct: 76 VRLRGLPFNATEKDIQEFFSG---------LGVKRVKFVCT-TGRPNGEAYVEFKTQDDA 125
Query: 501 DKALSKHKESIGIRYIE 517
KA+ ++ + RYIE
Sbjct: 126 GKAMENDRKEMSNRYIE 142
>gi|226487868|emb|CAX75599.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 292
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+RMRGLPY T K+ ID F A + N+ + F + TG+A V F +EA
Sbjct: 122 VRMRGLPYSAT-KEDIDRFLAPLQ-PVNIR-----MRFNAA--SRPTGEAIVDFASHDEA 172
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
+A+ K +E IG RYIELF ++T
Sbjct: 173 KEAMKKDREKIGSRYIELFLAST 195
>gi|226487878|emb|CAX75604.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 292
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+RMRGLPY T K+ ID F A + N+ + F + TG+A V F +EA
Sbjct: 122 VRMRGLPYSAT-KEDIDRFLAPLQ-PVNIR-----MRFNAA--SRPTGEAIVDFASHDEA 172
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
+A+ K +E IG RYIELF ++T
Sbjct: 173 KEAMKKDREKIGSRYIELFLAST 195
>gi|444727895|gb|ELW68371.1| Heterogeneous nuclear ribonucleoprotein H2 [Tupaia chinensis]
Length = 236
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF N M V PDG+ TG+A V F+ E+A
Sbjct: 90 VHMRGLPYRATENDIYNFFLL-----LNPMR----VHIEIGPDGRVTGEADVEFDTHEDA 140
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVL--NKTMELPKNNSLTSSNNGLSAQ 552
A++K K ++ RY+ELF ++TA + +EL N++ +S +Q
Sbjct: 141 VAAMAKDKVNMQHRYVELFLNSTAGTSGGAYDHSYVELYLNSTAGASGGAYGSQ 194
>gi|349605885|gb|AEQ00971.1| Heteroproteinous nuclear ribonucleoprotein H2-like protein, partial
[Equus caballus]
Length = 270
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 112 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 162
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 163 VAAMAKDKANMQHRYVELFLNSTA 186
>gi|403372892|gb|EJY86355.1| hypothetical protein OXYTRI_15124 [Oxytricha trifallax]
Length = 635
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 62/258 (24%)
Query: 350 SLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE 409
S + N IP + + + +A+ F + A + ID+++ D L+ HI + ++
Sbjct: 351 SDIFNQIP---KRITIFEIAIGRDQFDQH---ACIFRIDRDNLDNVLELGITHIKDQQVQ 404
Query: 410 VTKANGEDF----INVAGGNNNEAQA-------FLTRGAQVIIRMRGLPYECTAKQVIDF 458
V + +F N GG+N +A + +++RGLP+ ++ F
Sbjct: 405 VNEGTQGEFNHLRQNRRGGSNEHERADPQIDFSKYDLNDYLGLKLRGLPFSIKRDEINQF 464
Query: 459 FEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHK-ESIGIRYIE 517
F N + V + +G TG+ +LF EE++ KA + + +SIG R+IE
Sbjct: 465 F-------SNFNYVRDSVKLGRTGEGLLTGEGAILFHSEEDSKKAFQQRQGQSIGHRWIE 517
Query: 518 LFRSTTAEVQ-----QVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHII 572
L++ T A+ Q Q +T++L K I
Sbjct: 518 LYQITIADYQNFEEMQKQRRTVKLGK--------------------------------YI 545
Query: 573 TSGTRKDCIRLRGLPYEA 590
T R+ ++LRGLP++
Sbjct: 546 TDSNRERIMKLRGLPFQV 563
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALK-RHKHHIDKRYIEVTKANGEDFINVAGGN 425
V L + G GE + F +E A + R I R+IE+ + D+ N
Sbjct: 474 SVKLGRTGEGLLTGEGAILFHSEEDSKKAFQQRQGQSIGHRWIELYQITIADYQNFEEMQ 533
Query: 426 NNEAQAFLTR-----GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
L + + I+++RGLP++ + FF+ +V+ ++
Sbjct: 534 KQRRTVKLGKYITDSNRERIMKLRGLPFQVQPDDITRFFKDYQVTKSDVV--------IE 585
Query: 481 KPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ +GK TG V F+ +E A +A +++ IG RY+E+ T ++
Sbjct: 586 EINGKKTGFGLVFFKDQETAQQAQENMNRKKIGNRYVEIMEPTITDM 632
>gi|390363422|ref|XP_003730367.1| PREDICTED: uncharacterized protein LOC100888204 [Strongylocentrotus
purpuratus]
Length = 1832
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+R++GLP+ TAK + FE ++ DG GV + G GD F+ F +E
Sbjct: 2 IILRLQGLPWTATAKDIRQHFEG-----LSIPDG--GVHII----GGEEGDVFIAFGSDE 50
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+A KA+ + K+ + I L S+ +E+Q+V+ ++
Sbjct: 51 DARKAMQRQKQPLNGGRIMLLLSSKSEMQEVIAES 85
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV-----TKANGEDFINV 421
GV + GR G A ++ D ALKRH+ ++ KRYI+V ++ E ++
Sbjct: 612 GVQIHRDHRGRITGTANIKLQGPSDIDQALKRHQQYMGKRYIDVRPCLQSEWEKEKQVSS 671
Query: 422 AGGNNNEAQAFLT------RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
A + +++ + R I MRGL ++DFFE + ++
Sbjct: 672 AEPSKRRSRSPVRGRNSPLRNCNTCIEMRGLASFTKNSDIVDFFEG-------LAMRQDS 724
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+ DG +G A++ F + A +A K+ R + +
Sbjct: 725 IYLDPNKDGSGSGIAYLEFIDPDMARRACQKNGRQFNRRTVSI 767
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+ GLP++CT + V F N+ +GV + G+ TG A + + +
Sbjct: 585 VRLTGLPFDCTDRGVRLFLR-----DINIA--PDGVQIHRDHRGRITGTANIKLQGPSDI 637
Query: 501 DKALSKHKESIGIRYIEL 518
D+AL +H++ +G RYI++
Sbjct: 638 DQALKRHQQYMGKRYIDV 655
>gi|170047643|ref|XP_001851323.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870004|gb|EDS33387.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 99
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLIT 47
M VP + +VAT+G G LGSDE+E++LLIYVIID N V T
Sbjct: 1 MLVPGHVVSLYVATSGYNGAALGSDEKEVVLLIYVIIDVQTNNVSTT 47
>gi|328874866|gb|EGG23231.1| hypothetical protein DFA_05363 [Dictyostelium fasciculatum]
Length = 939
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 32/199 (16%)
Query: 346 NIWLSLLLNTIPG---------YEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMAL 396
NI S+LL +P + Q L + + + ++ G++ G+A V F +E +++L
Sbjct: 428 NINASVLLRGLPWGVSEDAVREFFQPLDVSFIDIFYNSNGKQTGDASVEFATEEDANLSL 487
Query: 397 KRHKHHIDKRYIEVTKANGE---------------DFINVAGGNNNEAQAFLTRGAQVII 441
RHK + RYIEV G+ + + T ++
Sbjct: 488 DRHKQMMGTRYIEVISRRKHPPPPPPPSPSQLQLQSSSGQNSGSASGGSSNTTTSNGKVL 547
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
++RGLP+ + + F S N +L +G+ +G+A+V F+ + A
Sbjct: 548 KLRGLPFSISTMDIRKFLNGYPIKSNN-------ILMTMNDEGRFSGEAYVEFQTSDIAQ 600
Query: 502 KALSK-HKESIGIRYIELF 519
ALS +++ RYIE F
Sbjct: 601 AALSNLQNKTMMSRYIEFF 619
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RGLP+ T + FF N +++ G G+ V + D + G A+V F ++
Sbjct: 801 VKLRGLPFTTTESDISTFF-----NGLDIVQG--GIKIVYQRD-RPMGIAYVTFTNSDDY 852
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQ 528
+ALS++ + +G RYIE+F ST+ ++
Sbjct: 853 HQALSRNNQHLGPRYIEVFPSTSKSGEK 880
>gi|313244026|emb|CBY14896.1| unnamed protein product [Oikopleura dioica]
Length = 407
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I++M GLPY T ++ +FF + ++ D V DG+ TG+AF F +++
Sbjct: 266 IVKMSGLPYRITRGEIREFF-----SPIDLTD----VRIEIGKDGRTTGNAFAAFFSDDD 316
Query: 500 ADKALSKHKESIGIRYIELFRST 522
A+ K+K+ +G RY+EL+ +
Sbjct: 317 VWNAMQKNKQMLGTRYVELYNKS 339
>gi|349605437|gb|AEQ00674.1| Heteroproteinous nuclear ribonucleoprotein H3-like protein, partial
[Equus caballus]
Length = 200
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+A
Sbjct: 51 VHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDA 101
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK K ++ RYIELF ++T
Sbjct: 102 VAAMSKDKNNMQHRYIELFLNST 124
>gi|395530818|ref|XP_003767484.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Sarcophilus harrisii]
Length = 344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + FF ++ G+ DGKATG+A V F E+A
Sbjct: 191 VHMRGLPYKATVNDIYHFFSPLCPLRVHIEIGQ---------DGKATGEADVDFVTHEDA 241
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
A++K K + RYIELF +TA
Sbjct: 242 VAAMAKEKTYMQHRYIELFLYSTAR 266
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ +RGLP+ CT + + FF + G++ GK+TG A V F +E
Sbjct: 20 LLCIRGLPFGCTKETIRHFFS-------ELEMVPSGIILPMDFQGKSTGTALVQFASQEA 72
Query: 500 ADKALSKHK 508
A+ A+ KHK
Sbjct: 73 AEIAIRKHK 81
>gi|440804101|gb|ELR24980.1| Znfinger in Ran binding protein [Acanthamoeba castellanii str.
Neff]
Length = 732
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 418 FINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
F+ +A G+ E + +I MRGLP+ T V FF + +++ G G+
Sbjct: 232 FLRLAEGSEEETK---------VIVMRGLPWSATDADVGMFF-----SGLDIVPG--GIH 275
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+ G+ +G A+V F EE + AL +H IG RYIE++ S + +L
Sbjct: 276 LIHDHTGRPSGVAYVEFSSAEEVNNALQRHNGFIGSRYIEVYPSDANSLTAIL 328
>gi|76154254|gb|AAX25744.2| SJCHGC00921 protein [Schistosoma japonicum]
Length = 805
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A + FF ++ +G GV V G GDAF+ F +E
Sbjct: 3 VIIRLQNLPISANAANIRRFFSG-----LSIPEG--GVHIV----GGTEGDAFIAFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL----SAQQP 554
+A KA+ +++I + LF S+ AE+Q ++ E K ++L SS N + +Q+
Sbjct: 52 DARKAMLLDRQTINGASVRLFLSSKAEMQSII----ESAKTSALFSSGNPVLSQPVSQKT 107
Query: 555 MLSHLAQVPVPYLP 568
H V P LP
Sbjct: 108 ETMHALDVTAPTLP 121
>gi|326674797|ref|XP_003200207.1| PREDICTED: RNA-binding protein 12B-A [Danio rerio]
Length = 685
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
A+V +++ G+P+ T V +FF AG + + +LF+K P G +G++ V F
Sbjct: 154 AEVYLKLTGMPFSATKDNVHNFF-AGLK--------VDDILFLKNPRGMFSGNSMVRFTT 204
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAE 525
+E+A + L + ++ +G RYI++ R T E
Sbjct: 205 KEDAIEGLKRDRQYMGSRYIQITRCTEEE 233
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 27/154 (17%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GL ++ + +FF + DG GV + G +AF++F +E
Sbjct: 3 VVIRLQGLRVTAGSEDIRNFF-----TGLRIPDG--GVHII----GGELEEAFIIFASDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+A +A+S+ I + LF S+ +E+Q VL ++ + N + + +
Sbjct: 52 DARRAMSRSGGCIKGSTVNLFLSSKSEMQSVLEESTRRSE-----FKNRAMYKEPVKRAS 106
Query: 559 LAQVPVPYLPQHIITSGTRKDCIR-----LRGLP 587
Q P+P+ + TR D R +RG P
Sbjct: 107 AEQGPLPF------SKDTRPDVRRADHPEMRGRP 134
>gi|226482640|emb|CAX73919.1| RNA-binding protein 12 [Schistosoma japonicum]
Length = 922
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A + FF ++ +G GV V G GDAF+ F +E
Sbjct: 3 VIIRLQNLPISANAANIRRFFSG-----LSIPEG--GVHIV----GGTEGDAFIAFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL----SAQQP 554
+A KA+ +++I + LF S+ AE+Q ++ E K ++L SS N + +Q+
Sbjct: 52 DARKAMLLDRQTINGASVRLFLSSKAEMQSII----ESAKTSALFSSGNPVLSQPVSQKT 107
Query: 555 MLSHLAQVPVPYLP 568
H V P LP
Sbjct: 108 ETMHALDVTAPTLP 121
>gi|395849855|ref|XP_003797528.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Otolemur
garnettii]
Length = 243
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EE
Sbjct: 118 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEE 168
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK + ++ RYIELF ++T
Sbjct: 169 AVAAMSKDRANMQHRYIELFLNST 192
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 394 MALKRHKHHIDKRYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECT 451
MALK+ + + +YIEV K++ D++ G N+ A +R+RGLP+ CT
Sbjct: 1 MALKKDRESMGHQYIEVFKSHRTEMDWVLKHSGPNSADSA-----NDGFVRLRGLPFGCT 55
Query: 452 AKQVIDFFE----AGTENSCNVMDG 472
++++ FF +G E + DG
Sbjct: 56 KEEIVQFFSGAGYSGYEEYSGLSDG 80
>gi|119574671|gb|EAW54286.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_e
[Homo sapiens]
Length = 177
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+A
Sbjct: 28 VHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHEDA 78
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK K ++ RYIELF ++T
Sbjct: 79 VAAMSKDKNNMQHRYIELFLNST 101
>gi|428180638|gb|EKX49505.1| hypothetical protein GUITHDRAFT_105029 [Guillardia theta CCMP2712]
Length = 374
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+++RGLP+ T+ V+ F + N + E + F DG+ +G+A+V F + E
Sbjct: 286 ATVKLRGLPFGATSLDVMGFLKG-----YNAV--ESSIRFGNNQDGRPSGEAWVSFNRLE 338
Query: 499 EADKAL-SKHKESIGIRYIELF 519
EA + + K + +G RY+ELF
Sbjct: 339 EAKRVVREKDRHHLGNRYVELF 360
>gi|345325737|ref|XP_003430953.1| PREDICTED: G-rich sequence factor 1-like [Ornithorhynchus anatinus]
Length = 224
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+RMRGLP++ A+ +++FF + GKATG+A V FE E+
Sbjct: 146 FVRMRGLPFQANAQDIVNFFSPLKPVR---------ITMEYSSSGKATGEADVHFESHED 196
Query: 500 ADKALSKHKESIGIRYIELF 519
A A++K + + RYIELF
Sbjct: 197 AVAAMAKDRSHVQHRYIELF 216
>gi|410905475|ref|XP_003966217.1| PREDICTED: RNA-binding protein 12B-B-like [Takifugu rubripes]
Length = 627
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+ + +RG+P+ T V +FF+ ++DG ++ +K G TG+ V F +
Sbjct: 138 LYVYLRGMPFSVTEMDVSNFFDG------LLIDG---IVLLKNGHGSNTGNGLVKFRSSD 188
Query: 499 EADKALSKHKESIGIRYIELFRSTT 523
+ +AL +H++ IG RY+E+ +ST
Sbjct: 189 DTYEALKRHRQYIGARYVEVSKSTA 213
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 365 LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
+ G+ L + G G +V+F + ALKRH+ +I RY+EV+K+ + AG
Sbjct: 163 IDGIVLLKNGHGSNTGNGLVKFRSSDDTYEALKRHRQYIGARYVEVSKSTANYWYQHAGS 222
Query: 425 --NNNEAQAFLTRGA---------------------------QVIIRMRGLPYECTAKQV 455
+ QA + R + + + L Y + +
Sbjct: 223 LPEMVDMQANVERDRSPLRNDRNLHQQRAPSPLAQRSNPADDEYCVLLENLSYTAEKEDI 282
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRY 515
+ F+ + N+ + + +L + DG+ T +FVLF+ + +ALS K R+
Sbjct: 283 RNLFQ-----NANLQNDQ--ILHLVSSDGRRTRSSFVLFKNLHDYCEALSHEKRLFFNRW 335
Query: 516 I 516
+
Sbjct: 336 V 336
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GL ++ + FF + DG GV + G +AF+LF +E
Sbjct: 3 VVIRLQGLRITAGSEDIRKFF-----TGLKIPDG--GVHII----GGEHDEAFILFASDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
+A +A+++ I ++LF S+ E+Q L + E+
Sbjct: 52 DARRAMNRSGGCIRGSPVQLFLSSQTEMQNTLERNSEI 89
>gi|256073174|ref|XP_002572907.1| rna-binding protein 12 (sh3/ww domain anchor protein in the
nucleus) (swan) [Schistosoma mansoni]
gi|350645108|emb|CCD60169.1| rna-binding protein 12 (sh3/ww domain anchor protein in the
nucleus) (swan), putative [Schistosoma mansoni]
Length = 923
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A + FF ++ +G GV V G GDAF+ F +E
Sbjct: 3 VIIRLQNLPISANASNIRRFFSG-----LSIPEG--GVHIV----GGTEGDAFIAFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLS- 557
+A KA+ +++I + LF S+ AE+Q ++ E K ++L SS QP+
Sbjct: 52 DARKAMLLDRQTINGASVRLFLSSKAEMQSII----ESAKTSALFSSGGNPVLSQPISQK 107
Query: 558 ----HLAQVPVPYLP 568
H V P LP
Sbjct: 108 TETMHALDVTAPTLP 122
>gi|395730677|ref|XP_003775769.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Pongo abelii]
Length = 352
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++R+ G + C+ + D ++C + G G+ +G+AFV
Sbjct: 8 GEGFVVRLHGPSWPCSVEDAQDVL-----SNCTMPHRAAGEFHPHHRXGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLS 550
EE AL K +ES+G R I +F+S EV VL K NS S+N G +
Sbjct: 63 XEENIKMALEKDRESMGHRRIAVFKSHXTEVSWVLKKHR---GPNSAGSANYGFA 114
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 401 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 451
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
KAL ++E +G RYIE+FR ++ + T LPKN++
Sbjct: 452 VKKALKCNREYMGGRYIEVFR------EKNVTTTKGLPKNSA 487
>gi|196011702|ref|XP_002115714.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
gi|190581490|gb|EDV21566.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
Length = 341
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+ I++RGLP++ +++ +FF + +M +G KP+G A FV F EE
Sbjct: 211 ITIKLRGLPFDVNEEEIKEFFHPTKLENTRLMTNHKG-----KPNGVA----FVDFTNEE 261
Query: 499 EADKALSKHKESIGIRYIELF 519
+A KA+ +K+ I RYIELF
Sbjct: 262 DACKAMKSNKDYIRNRYIELF 282
>gi|149412787|ref|XP_001509129.1| PREDICTED: RNA-binding protein 12B-like [Ornithorhynchus anatinus]
Length = 692
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 101/279 (36%), Gaps = 68/279 (24%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + GV L GR NG+ V+F L+RH+H++ R++E++ A+ + ++
Sbjct: 186 LRVDGVILLKHHNGRNNGDGFVKFATSHDALGGLQRHRHYMGPRFVEISPASQQQWVECG 245
Query: 423 GGNNNEAQAFLTR-----------------------------------GAQVIIRMRGLP 447
GG + E + R G + ++ L
Sbjct: 246 GGPDLEMEVGRIRSKERSPPRGMNDLRLKKRSRSRSPRRLRTRSRSPRGHGFYVHLKNLS 305
Query: 448 YECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKH 507
K + FF N+ + F+ K D K T AFV+F+ + ++AL H
Sbjct: 306 LSTEKKDIKAFFR-------NIDLTSNQIKFLYK-DQKRTRSAFVMFKTPRDYNEALCLH 357
Query: 508 KESIGIRYIELFRSTTAEVQQVLNKTM----ELPKNNSLTSSNNGLSAQQ-PMLSHLAQV 562
K + R + + KTM + + L +++ Q P S+
Sbjct: 358 K--------AVLRQRPVHIDPISKKTMLKFIDAYEGRGLGAADRERPPQAVPDRSYREGY 409
Query: 563 PVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFVG 601
P P L CI +R P++ I + FF G
Sbjct: 410 PGPRL------------CIYIRNFPFDVTKIEVQKFFAG 436
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G EA+ F + + + G+PY T +V FF + V +GV+ +K +
Sbjct: 150 GARKEARTFQSDDRYLF--LHGMPYSVTEGEVHAFF-----SGLRV----DGVILLKHHN 198
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
G+ GD FV F +A L +H+ +G R++E+
Sbjct: 199 GRNNGDGFVKFATSHDALGGLQRHRHYMGPRFVEI 233
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF + N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVVAGPVDIRHFF-----SGLNIPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S I IELF S+ E+Q +
Sbjct: 52 DARRAMSCSGGFIKDSLIELFLSSKTEMQNTI 83
>gi|28279187|gb|AAH45946.1| Zgc:56148 [Danio rerio]
Length = 314
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
A+V +++ G+P+ T V +FF AG V D +LF+K P G +G++ V F
Sbjct: 154 AEVYLKLTGMPFSATKDNVHNFF-AG----LKVDD----ILFLKNPRGMFSGNSMVRFTT 204
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAE 525
+E+A + L + ++ +G RYI++ R T E
Sbjct: 205 KEDAIEGLKRDRQYMGSRYIQITRCTEEE 233
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GL ++ + +FF + DG GV + G +AF++F +E
Sbjct: 3 VVIRLQGLRVTAGSEDIRNFF-----TGLRIPDG--GVHII----GGELEEAFIIFASDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+A +A+S+ I + LF S+ +E+Q VL E + + L N + + +
Sbjct: 52 DARRAMSRSGGCIKGSTVNLFLSSKSEMQSVLE---ESTRRSEL--KNRAMYKEPAKRAS 106
Query: 559 LAQVPVPYLPQHIITSGTRKDCIR-----LRGLP 587
Q P+P+ + TR D R +RG P
Sbjct: 107 AEQGPLPF------SKDTRPDVRRADHPEMRGRP 134
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 297 TVKLRGAPFNVTEKNVLEFLAPLKPAAIRI---------VRNAHGNKTGYVFVDFSSEEE 347
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
KAL ++E +G RYIE+FR + + KT P
Sbjct: 348 VKKALKCNREYMGGRYIEVFREQNVPIAKGTLKTSAKP 385
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K V++F + V V+ G TG FV F EEE
Sbjct: 299 VKLRGAPFNVTEKNVMEFLAPLKPAAIRV---------VRNAHGNKTGYVFVDFSSEEEV 349
Query: 501 DKALSKHKESIGIRYIELFR 520
KAL ++E +G RYIE+FR
Sbjct: 350 RKALKCNREYMGGRYIEVFR 369
>gi|348534026|ref|XP_003454504.1| PREDICTED: RNA-binding protein 12B-A-like [Oreochromis niloticus]
Length = 634
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
V + ++GLP+ T K++ DFF V+D V+ +K G G FV F
Sbjct: 137 DVFLFLKGLPFSVTEKEICDFFGG------LVVDE---VVLIKNRQGLNNGTGFVKFATR 187
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+A + L + +E IG RYIE+ +T + +V +
Sbjct: 188 EDAMEGLKRDREYIGSRYIEISTTTLNDWHRVTGR 222
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 44/229 (19%)
Query: 302 FNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLS--------LLL 353
F R P+ Q P+ V + P+ G C L++N+ + L
Sbjct: 232 FQRGRSPIPNQRDPQHRVRSRSPVAQRRIAPSEGE---YCVLLENLSFAVEKEDIKRLFH 288
Query: 354 NTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA 413
N G +Q+L L + + G+R A+V F AL K R +
Sbjct: 289 NAKLGDDQILHL------IDSDGKRKRSALVLFKSLRDYCEALAHEKRQFFNRLVHTRPV 342
Query: 414 NGEDFI--------NVAGGNNNEAQAFLTRGA----------QVIIRMRGLPYECTAKQV 455
+ E+ I V N+E F R A ++ + +R LP++ ++
Sbjct: 343 SRENMIALLKPQGTTVRPSGNSER--FQERPASYSSDPYDSEKMCVFVRNLPFDVRKVEI 400
Query: 456 IDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKAL 504
IDFF + N+ E+ V ++ +G G A V+F E EA +AL
Sbjct: 401 IDFF-----HGFNIT--EDNVCVLQDREGAGVGQALVVFGSEAEAMRAL 442
>gi|159164096|pdb|2DGW|A Chain A, Solution Structure Of The Second Rna Recognition Motif In
Rna-Binding Protein 19
Length = 91
Score = 49.7 bits (117), Expect = 0.005, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 13 VKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEEV 63
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
+AL ++E +G RYIE+FR +
Sbjct: 64 KQALKCNREYMGGRYIEVFREKSG 87
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSSEEE 345
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNS 541
KAL ++E +G RYIE+FR A V + PKN+S
Sbjct: 346 VKKALKCNREYMGGRYIEVFREKQAPVAKA------PPKNSS 381
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 301 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDFSSEEE 351
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEV 526
KAL ++E +G RYIE+FR T V
Sbjct: 352 VKKALKCNREYMGGRYIEVFREKTVPV 378
>gi|296480483|tpg|DAA22598.1| TPA: mCG11326-like [Bos taurus]
Length = 290
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 140 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA---------DGRATGEADVEFVTHED 190
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 191 AVAAMSKDKNNMQHRYIELFLNST 214
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 425 NNNEAQAFLTRGAQVII---RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
+++E +G +I+ +++GLP+ CT +QV +FF + +V+D + F+
Sbjct: 379 DSDEEDEASEQGDSIIVFTAKLQGLPFRCTEQQVREFF-----SPLSVVD----IRFLLD 429
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
+ G AFV F + + AL KH++++G R++E+ S T ++
Sbjct: 430 RRKRGKGVAFVDFATKRDYKAALKKHRQTLGPRFVEVLPSKTRKL 474
>gi|194747277|ref|XP_001956079.1| GF25026 [Drosophila ananassae]
gi|190623361|gb|EDV38885.1| GF25026 [Drosophila ananassae]
Length = 1037
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 439 VIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF A E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLAIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
+E+A A+ K +E + + L S+ AE+Q+V+ + P
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVIETARKGP 90
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
Q ++MRG P+ KQ+ +FF T S NV K G TG +V F+ E
Sbjct: 142 QFSVKMRGCPFNIKEKQIREFFFPITVKSLNVQ---------KTDHGSRTGFVYVHFKTE 192
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQ 527
E+ + AL + + I RYIELF+ A+ Q
Sbjct: 193 EDREAALKHNGDYIKGRYIELFKQLAAKHQ 222
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 297 TVKLRGAPFNVTEKNVVEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDFSSEEE 347
Query: 500 ADKALSKHKESIGIRYIELFR 520
KAL ++E +G RYIE+FR
Sbjct: 348 VKKALKCNREYMGGRYIEVFR 368
>gi|300122335|emb|CBK22907.2| unnamed protein product [Blastocystis hominis]
Length = 546
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+++RGLPY T +++ FF A E + GE ++ + + +G+AFV F E
Sbjct: 434 TTLKLRGLPYTATKEEIAAFF-APLEVPRDAK-GELTIVIGQDNKQRPSGEAFVTFSSVE 491
Query: 499 EADKALSKHKESIGIRYIELF 519
++ K L H +++G RYIE+F
Sbjct: 492 DSAKGLEYHLKNLGKRYIEIF 512
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 296 VKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFNSEEEV 346
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
KAL ++E +G RYIE+FR ++
Sbjct: 347 KKALKCNREYMGGRYIEVFREKSS 370
>gi|384253302|gb|EIE26777.1| hypothetical protein COCSUDRAFT_64653 [Coccomyxa subellipsoidea
C-169]
Length = 472
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I++RG+P+ T + FF ++C M E+ V V PDG+ TG+A+V
Sbjct: 379 IKLRGIPFTITKPDICSFF-----STCGQMS-EDKVKLVVGPDGRPTGEAYVEISGAGAK 432
Query: 501 DK-ALSKHKESI--GIRYIELFRSTTAEVQQ 528
+ AL+K ++ + RYIE+F ST EV +
Sbjct: 433 LRLALAKDRQIMPGSSRYIEIFTSTRDEVDR 463
>gi|195021602|ref|XP_001985427.1| GH14505 [Drosophila grimshawi]
gi|193898909|gb|EDV97775.1| GH14505 [Drosophila grimshawi]
Length = 1049
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF A E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLAIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
+E+A A+ K +E + + L S+ AE+Q+V+ ++
Sbjct: 50 DEDARCAMLKDREKLMEVQVRLLLSSRAEMQKVIETARKV 89
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 26/184 (14%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA---- 422
G+ + A G R G A + F AL R+ R +++T E+F
Sbjct: 439 GIKIISGANGTRTGIAYIEFSRVSSAQKALLRNNTMFRDRLVQITPIGDEEFEQADERSQ 498
Query: 423 -----------GGNNNEAQAFLTRG--AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNV 469
G N++ A + ++ + LP T + ++ F A +C +
Sbjct: 499 RSSASQSHHQHGHKNDDRSAPAGQPPITTNVLYVEDLPQLTTEQDIMKMFSA----TCTI 554
Query: 470 MDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKAL-SKHKESIGIRYIELFRSTTAEVQQ 528
+D +L P + AFVLF +E EA AL + + IG R + + S AE+Q
Sbjct: 555 VD----ILLAPSPINRREFVAFVLFARENEARSALEDQSRHFIGFRKLRVRASNMAEMQS 610
Query: 529 VLNK 532
+K
Sbjct: 611 SKDK 614
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 285 TVKLRGAPFNVTEKSVTEFLAPLRPVAIRI---------VRNAHGNKTGYIFVDFSSEEE 335
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL H+E +G RYIE+FR
Sbjct: 336 VKQALKCHREYMGGRYIEVFR 356
>gi|39644691|gb|AAH04511.2| HNRPH3 protein, partial [Homo sapiens]
Length = 207
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 57 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 107
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 108 AVAAMSKDKNNMQHRYIELFLNST 131
>gi|194379882|dbj|BAG58293.1| unnamed protein product [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 88 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 138
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 139 AVAAMSKDKNNMQHRYIELFLNST 162
>gi|159486121|ref|XP_001701092.1| heterogeneous nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158271986|gb|EDO97794.1| heterogeneous nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 295
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RGLP+ +I FF+ + S + + + + G+ TG A V F E
Sbjct: 200 LKLRGLPFAAVPDDIIAFFD---DPSLGIPRLDPSRVHMWTDGGRPTGMALVQFNTPAEV 256
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
A +K K+ +G RY+E+F +T ++ + + +T E
Sbjct: 257 SMARAKDKQLMGTRYVEIFPATRGDLDKFMARTGE 291
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++ + F E + ++ VK+ DG+ +G+AFV+ ++
Sbjct: 30 VRLRGLPFDVMEGDIKMFLELEPVD----------IVMVKR-DGRFSGEAFVVVGNLQQV 78
Query: 501 DKALSKHKESIGIRYIELF 519
+ A++KH++ IG R+IE+F
Sbjct: 79 EAAMTKHRQFIGQRFIEIF 97
>gi|195439718|ref|XP_002067706.1| GK12567 [Drosophila willistoni]
gi|194163791|gb|EDW78692.1| GK12567 [Drosophila willistoni]
Length = 1092
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEVQVRLLLSSRAEMQKVI 83
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNSHGNKTGYIFVDFSSEEE 345
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
KAL ++E +G RYIE+FR ++
Sbjct: 346 VKKALKCNREYMGGRYIEVFREKSS 370
>gi|334327209|ref|XP_001378263.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Monodelphis domestica]
Length = 231
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
+ + R + MRGLPY T + +FF ++ G PDG+ T
Sbjct: 80 DGGSTFQRTTDHCVHMRGLPYRVTENDIYNFFSPFNPVREHIEIG---------PDGRVT 130
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
G+ V F E+A A+SK K ++ RY++LF ++TA
Sbjct: 131 GEVDVEFATHEDAVAAMSKDKANMQHRYVKLFLNSTA 167
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 302 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDFSSEEE 352
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
KAL ++E +G RYIE+FR +
Sbjct: 353 VKKALQCNREYMGGRYIEVFREKS 376
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG+P+ KQ+ +F + + E G TG +V E
Sbjct: 288 EFTVKLRGVPFNVKEKQIREFMTPLKPAAVRIGKNE---------SGNRTGYVYVDLHSE 338
Query: 498 EEADKALSKHKESIGIRYIELFR 520
EE +KAL K+K+ IG RYIE+FR
Sbjct: 339 EEVEKALKKNKDYIGGRYIEVFR 361
>gi|195127149|ref|XP_002008031.1| GI13280 [Drosophila mojavensis]
gi|193919640|gb|EDW18507.1| GI13280 [Drosophila mojavensis]
Length = 1101
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 23/181 (12%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ + G R G A + F AL R+ R +++ + E+F V ++
Sbjct: 454 GIKIVSGPNGTRTGVAYIEFSRVSSAQKALLRNNTLFRDRLVQIVPISDEEFEQVDERSH 513
Query: 427 --------------NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A T ++ + LP T + ++ F A + ++D
Sbjct: 514 RGNSNSHSSSSPAERSTAAPGTLPPISVLYVEDLPQLTTEQDIMKMFSA----TYTIVD- 568
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVLN 531
+L P+ + AFVLF +E EA AL + IG R + + S+ AE+Q +
Sbjct: 569 ---ILLAPSPNNRREFVAFVLFARENEARSALEDTSRHYIGFRKLRVRASSQAEMQNARD 625
Query: 532 K 532
K
Sbjct: 626 K 626
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 297 TVKLRGAPFNVTEKSVTEFLAPLRPVAIRI---------VRNAHGNKTGYIFVDFSSEEE 347
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL H+E +G RYIE+FR
Sbjct: 348 VKQALKCHREYMGGRYIEVFR 368
>gi|5911913|emb|CAB55897.1| hypothetical protein [Homo sapiens]
gi|7739441|gb|AAF68848.1| hnRNP 2H9C [Homo sapiens]
gi|119574666|gb|EAW54281.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574669|gb|EAW54284.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574672|gb|EAW54287.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574673|gb|EAW54288.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|193787147|dbj|BAG52353.1| unnamed protein product [Homo sapiens]
Length = 215
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 65 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 115
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 116 AVAAMSKDKNNMQHRYIELFLNST 139
>gi|344273251|ref|XP_003408437.1| PREDICTED: RNA-binding protein 12B-like [Loxodonta africana]
Length = 971
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGEVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNN 540
+A +A+S+ I Y+ELF S+ AE+Q KT+E+ + +
Sbjct: 52 DARRAISRSGGLIKDSYVELFLSSKAEMQ----KTIEMKRTD 89
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF AG C +GV+F+K DG+ GDA V F +A
Sbjct: 154 LRGLPYLVNEDDVRVFF-AGL---CV-----DGVIFLKLHDGRNNGDAIVKFASCIDASG 204
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQV 562
L H+ +G R+IE+ +S+ + K ++P S G++ + ++
Sbjct: 205 GLKCHRSFMGSRFIEVMQSSEQQWIHCGGKQDDVPMRTEEHSPARGINDRHSRKRSHSKS 264
Query: 563 P 563
P
Sbjct: 265 P 265
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+R+RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 288 TVRLRGAPFNVTEKNVTEFLAPLRPVAIRI---------VRNAHGNKTGYIFVDFSSEEE 338
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
+AL ++E +G RYIE+FR A
Sbjct: 339 VKQALKCNREYMGGRYIEVFREKNA 363
>gi|125541750|gb|EAY88145.1| hypothetical protein OsI_09580 [Oryza sativa Indica Group]
Length = 226
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+ GLP++C+ + FF C ++D + G T +AFV+F +A
Sbjct: 24 VRLLGLPFDCSDLDICKFFVGLDIVDC-LLDHKNGCF---------TDEAFVVFPSAMQA 73
Query: 501 DKALSKHKESIGIRYIELFRSTTAE 525
+ AL ++++++G RY+E+FR E
Sbjct: 74 EFALHRNRQNMGRRYVEVFRCKKQE 98
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVI 440
EA V F + AL R++ ++ +RY+EV + +++ + R +
Sbjct: 62 EAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSSIAAEK--------RTPPDV 113
Query: 441 IRMRGLPYECTAKQVIDFF 459
+++RGLPY TA+ +I FF
Sbjct: 114 LKLRGLPYFTTAEDIIKFF 132
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAVRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
KAL ++E +G RYIE+FR
Sbjct: 346 VKKALKCNREYMGGRYIEVFR 366
>gi|326512460|dbj|BAJ99585.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
++++G P E T ++ +FFE + G+ + ++ P+G+ + FV F +
Sbjct: 246 VKVKGQPAETTEDEIREFFEG-------LSVGKISMHSLEIPNGRTVTEVFVTFNDPADV 298
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+ AL K ++ IG R++ + RS+ EV++++ + +
Sbjct: 299 NAALEKDRQKIGSRWVSIKRSSAKEVRKLIQRKRD 333
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K V++F + + V+ G TG FV EEE
Sbjct: 296 VKLRGAPFNVTEKNVLEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDLSSEEEV 346
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
KAL ++E +G RYIE+FR A + K+ P
Sbjct: 347 KKALKCNREYMGGRYIEVFREKQASAARGAPKSSSAP 383
>gi|194864880|ref|XP_001971153.1| GG14589 [Drosophila erecta]
gi|190652936|gb|EDV50179.1| GG14589 [Drosophila erecta]
Length = 995
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
>gi|126322103|ref|XP_001368765.1| PREDICTED: RNA-binding protein 12B-like [Monodelphis domestica]
Length = 745
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 105/275 (38%), Gaps = 62/275 (22%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + G+ L GR NG+ +V+F L+RH+H++ R++EV+ A+ + +I+
Sbjct: 190 LCVDGIILLKHPTGRNNGDCLVKFATSHDALGGLQRHRHYMGSRFVEVSPASEQQWIDCG 249
Query: 423 GGNN------------------NEAQAFLTRGAQVIIRM----------------RGLPY 448
G + N+A + ++ RM + L
Sbjct: 250 GSADIKDEVHFRSEERSPQRGINDAHSKKRSRSKSPRRMKRRSRSPHKYGFYVHLKNLSL 309
Query: 449 ECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHK 508
+ + +FF S + + F+ K D K TG AFV+F+ + + AL+ HK
Sbjct: 310 SVEKRDIKNFFRDTDLAS-------DQIKFLYK-DQKRTGSAFVMFKTLRDYNSALALHK 361
Query: 509 ESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLP 568
+ R + L + + + E ++ S+ G ++P
Sbjct: 362 FILFHRQV-LIDPISKKTMLKFIECYEKKRSGSVGRERPG-----------------HIP 403
Query: 569 QHIITSGTR--KDCIRLRGLPYEALCILMDIFFVG 601
+ G K CI +R P++ + + FF G
Sbjct: 404 EKTYREGHSGPKLCIYIRNFPFDVTKVEVQKFFAG 438
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY T +V FF C +G++ +K P G+ GD V F +A
Sbjct: 171 LRGLPYSATEDEVRAFFPG----LC-----VDGIILLKHPTGRNNGDCLVKFATSHDALG 221
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLN 531
L +H+ +G R++E+ + A QQ ++
Sbjct: 222 GLQRHRHYMGSRFVEV---SPASEQQWID 247
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF + N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVIAGPVDIRHFF-----SGLNIPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S+ I +ELF S+ E+Q +
Sbjct: 52 DARRAMSRSGGFIKDSPVELFLSSKTEMQNTI 83
>gi|195376909|ref|XP_002047235.1| GJ12048 [Drosophila virilis]
gi|194154393|gb|EDW69577.1| GJ12048 [Drosophila virilis]
Length = 1091
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
+E+A A+ K +E + + L S+ AE+Q+V+ ++
Sbjct: 50 DEDARCAMLKDREKLMEVQVRLLLSSRAEMQKVIETARKV 89
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF--INVAGG 424
G+ + A G R G A V F A+ R+ R +++ + E+F +
Sbjct: 471 GIKIVNGANGTRTGIAYVEFSRVSSAQKAVLRNNTMFRDRLVQIVPISDEEFEQADERAQ 530
Query: 425 NNNEAQAFLTRGAQV------------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
+ RG + ++ + LP T + ++ F A +C ++D
Sbjct: 531 RHGGGGGGALRGDERASGVAAAVQQTNVLYVEDLPQLTTEQDIMKMFSA----TCTIVD- 585
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVLN 531
+L P+ + AFVLF +E EA AL + IG R + + S+ AE+Q
Sbjct: 586 ---ILLAPSPNNRREFVAFVLFARENEARSALEDASRHYIGFRKLRVRASSQAEMQNARE 642
Query: 532 K 532
K
Sbjct: 643 K 643
>gi|24655341|ref|NP_647626.1| CG7879, isoform A [Drosophila melanogaster]
gi|24655346|ref|NP_728631.1| CG7879, isoform B [Drosophila melanogaster]
gi|7292101|gb|AAF47513.1| CG7879, isoform A [Drosophila melanogaster]
gi|7292102|gb|AAF47514.1| CG7879, isoform B [Drosophila melanogaster]
Length = 985
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 31/180 (17%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-------------NVA 422
G R G A V F A++R+ R I++ ++F + +
Sbjct: 391 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVPVGDDEFEMAEERASRQGQDGSRS 450
Query: 423 GGNNNE---------AQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE 473
GN+N A + R ++ + LP T + ++ F A S V+D
Sbjct: 451 HGNHNGGDRGERGGGAPVPVPRPVTNVLYIEDLPQTTTEQDIMKMFSA----SYTVVD-- 504
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKAL-SKHKESIGIRYIELFRSTTAEVQQVLNK 532
+L P + AFVLF +E EAD AL K IG R + + S+ ++Q K
Sbjct: 505 --ILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDMQNAKEK 562
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query: 442 RMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEAD 501
+MRGLP++ K +++FF + + FV G+ +G AFV F + + +
Sbjct: 256 KMRGLPFKAKDKHILEFFSPLKPVA---------IRFVMNKKGQPSGCAFVDFSSKSDLE 306
Query: 502 KALSKHKESIGIRYIELFRST 522
KAL ++K+ + RYIELF+ T
Sbjct: 307 KALKRNKDYLQGRYIELFKDT 327
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
K +HILEF S + + V N +GQPSG AF+ S+ L L+ N++ +
Sbjct: 263 KAKDKHILEFF----SPLKPVAIRFVMNKKGQPSGCAFVDFSSKSD--LEKALKRNKDYL 316
Query: 119 FGKKQRYIEVFQCSGEDMN 137
G RYIE+F+ + D +
Sbjct: 317 QG---RYIELFKDTNRDFD 332
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
+ ++ G+ +G A V F + + ALKR+K ++ RYIE+ K DF N G+
Sbjct: 280 AIRFVMNKKGQPSGCAFVDFSSKSDLEKALKRNKDYLQGRYIELFKDTNRDFDNNKQGDG 339
Query: 427 NEAQAFLTR-------------GAQVIIRMRGLPYECTAKQVIDFFE 460
++++ + G + +R L Y C+ + + FE
Sbjct: 340 E--KSWMRKLQEKGDDEEEEPIGESGRLFLRNLAYSCSEEDIQHLFE 384
>gi|20152135|gb|AAM11427.1| SD09402p [Drosophila melanogaster]
Length = 984
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 31/180 (17%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-------------NVA 422
G R G A V F A++R+ R I++ ++F + +
Sbjct: 391 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVPVGDDEFEMAEERASRQGQDGSRS 450
Query: 423 GGNNNE---------AQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE 473
GN+N A + R ++ + LP T + ++ F A S V+D
Sbjct: 451 HGNHNGGDRGERGGGAPVPVPRPVTNVLYIEDLPQTTTEQDIMKMFSA----SYTVVD-- 504
Query: 474 EGVLFVKKPDGKATGDAFVLFEKEEEADKAL-SKHKESIGIRYIELFRSTTAEVQQVLNK 532
+L P + AFVLF +E EAD AL K IG R + + S+ ++Q K
Sbjct: 505 --ILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDMQNAKEK 562
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG P+ +QV +F + + +K G TG +V E
Sbjct: 278 EFTVKLRGCPFNVKEQQVREFMTPLKPAAIRI---------IKNATGNKTGYIYVDMRSE 328
Query: 498 EEADKALSKHKESIGIRYIELFRST 522
EE +KAL K+K+ +G RYIE+FR++
Sbjct: 329 EEVEKALKKNKDYMGGRYIEVFRTS 353
>gi|149063465|gb|EDM13788.1| RNA binding motif protein 19 (predicted) [Rattus norvegicus]
Length = 451
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV EEE
Sbjct: 295 TVKLRGAPFNVTEKNVLEFLAPLKPVA---------IRIVRNAHGNKTGYVFVDLSSEEE 345
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
KAL ++E +G RYIE+FR A + K+ P
Sbjct: 346 VKKALKCNREYMGGRYIEVFREKQASAARGAPKSSSAP 383
>gi|195586962|ref|XP_002083236.1| GD13466 [Drosophila simulans]
gi|194195245|gb|EDX08821.1| GD13466 [Drosophila simulans]
Length = 986
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 30/179 (16%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-------------NVA 422
G R G A V F A++R+ R +++ ++F + +
Sbjct: 394 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLVQIVPVGDDEFELAEERASRQGQDGSRS 453
Query: 423 GGNNNEAQAFLTRGAQV--------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
GNN + GA + ++ + LP T + ++ F A S V+D
Sbjct: 454 HGNNGVEKGERGGGAAIPMARPVTNVLYIEDLPQTTTEQDIMKMFSA----SYTVVD--- 506
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKAL-SKHKESIGIRYIELFRSTTAEVQQVLNK 532
+L P + AFVLF +E EAD AL K IG R + + S+ ++Q K
Sbjct: 507 -ILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVKSSSEEDMQNAKEK 564
>gi|195490443|ref|XP_002093142.1| GE20949 [Drosophila yakuba]
gi|194179243|gb|EDW92854.1| GE20949 [Drosophila yakuba]
Length = 1002
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ + LP T ++++ F A S V+D +L P+ + AFVLF +E E
Sbjct: 477 VLYVEDLPQTTTEQEIMKMFSA----SYTVVD----ILLSPSPNNRRESVAFVLFAREGE 528
Query: 500 ADKAL-SKHKESIGIRYIELFRSTTAEVQQVLNK 532
AD AL K IG R + + S+ E+Q K
Sbjct: 529 ADSALQDTSKHYIGFRQLRVSPSSEEEMQNAKEK 562
>gi|195336616|ref|XP_002034931.1| GM14203 [Drosophila sechellia]
gi|194128024|gb|EDW50067.1| GM14203 [Drosophila sechellia]
Length = 987
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 30/179 (16%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFI-------------NVA 422
G R G A V F A++R+ R +++ ++F + +
Sbjct: 395 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLVQIVPVGDDEFELAEERASRQGQDGSRS 454
Query: 423 GGNNNEAQAFLTRGAQV--------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
GNN + GA + ++ + LP T + +I F A S V+D
Sbjct: 455 HGNNGVEKGERGGGAAIPVPRTVTNVLYIEDLPQTTTEQDIIKMFSA----SYTVVD--- 507
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKAL-SKHKESIGIRYIELFRSTTAEVQQVLNK 532
+L P + AFVLF +E EAD AL K IG + + S+ ++Q K
Sbjct: 508 -ILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFCQLRVKSSSEEDMQNAKEK 565
>gi|300120417|emb|CBK19971.2| unnamed protein product [Blastocystis hominis]
Length = 378
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+++RGLPY T +++ FF A E + GE ++ + + +G+AFV F E
Sbjct: 257 TTLKLRGLPYTATKEEIAAFF-APLEVPRDAK-GELTIVIGQDNLQRPSGEAFVTFSSVE 314
Query: 499 EADKALSKHKESIGIRYIELF 519
++ K L H +++G RYIE+F
Sbjct: 315 DSAKGLEYHLKNLGKRYIEIF 335
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K V++F + + V+ G TG FV EEE
Sbjct: 296 VKLRGAPFNVTEKNVLEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDLSSEEEV 346
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
KAL ++E +G RYIE+FR A + K+ P
Sbjct: 347 KKALKCNREYMGGRYIEVFREKQASAARGAPKSSSAP 383
>gi|158286040|ref|XP_001688002.1| AGAP007221-PA [Anopheles gambiae str. PEST]
gi|157020278|gb|EDO64651.1| AGAP007221-PA [Anopheles gambiae str. PEST]
Length = 1197
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A V FF+ ++ DG GV V G A GDAF+ F +E
Sbjct: 3 VIIRLQNLPLAANASDVRSFFKG-----LSIPDG--GVHIV----GGALGDAFIAFSTDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+A +A++ + I I L S+ AE+Q+V+ + +
Sbjct: 52 DARQAMALNGGCIKNEPISLLLSSRAEMQKVIEQARK 88
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 290 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSSEEE 340
Query: 500 ADKALSKHKESIGIRYIELFR 520
KAL ++E +G RYIE+FR
Sbjct: 341 VKKALKCNREYMGGRYIEVFR 361
>gi|311253626|ref|XP_003125614.1| PREDICTED: RNA-binding protein 12B [Sus scrofa]
Length = 986
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRMGRDRPGSGA 100
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAE 525
L H+ +G R+IE+ + + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEQQ 232
>gi|198465484|ref|XP_001353649.2| GA20654 [Drosophila pseudoobscura pseudoobscura]
gi|198150179|gb|EAL31163.2| GA20654 [Drosophila pseudoobscura pseudoobscura]
Length = 1043
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
>gi|195175076|ref|XP_002028289.1| GL16722 [Drosophila persimilis]
gi|194117421|gb|EDW39464.1| GL16722 [Drosophila persimilis]
Length = 1044
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A+ + +FF + E +++ GE GDAF+ F
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHIIGGE-------------MGDAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A A+ K +E + + L S+ AE+Q+V+
Sbjct: 50 DEDARCAMLKDREKLMEIQVRLLLSSRAEMQKVI 83
>gi|431917851|gb|ELK17082.1| RNA-binding protein 12B [Pteropus alecto]
Length = 965
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 44 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGDVGEAFIIFATDE 92
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 93 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRIGRERPGSGA 141
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 199 LRGLPYLVNENDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 249
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 250 GLKCHRSFMGSRFIEVMQGS 269
>gi|301609834|ref|XP_002934460.1| PREDICTED: RNA-binding protein 12B-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 659
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + + FF + ++ DG GV G G+AF++F +E
Sbjct: 3 VVIRLQGLPVVAGSTDIRHFF-----SGLHIPDG--GVHIT----GGKIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S+ I IELF S+ AE+Q L
Sbjct: 52 DARRAMSRSGGFIKKSRIELFLSSKAEMQHTL 83
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K VI+F + + V+ G TG FV EEE
Sbjct: 295 VKLRGAPFNVTEKNVIEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDLSSEEEV 345
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
KAL +++ +G RYIE+FR A
Sbjct: 346 KKALKCNRDYMGGRYIEVFREKQA 369
>gi|395512126|ref|XP_003760295.1| PREDICTED: RNA-binding protein 12B [Sarcophilus harrisii]
Length = 745
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY T +V FF C +GV+ +K P G+ GD V F +A
Sbjct: 171 LRGLPYSATEDEVRAFFPG----LC-----VDGVILLKHPTGRNNGDCLVKFATSHDALG 221
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLN 531
L +H+ +G R++E+ + A QQ ++
Sbjct: 222 GLQRHRHYMGSRFVEV---SPASEQQWID 247
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 103/275 (37%), Gaps = 62/275 (22%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + GV L GR NG+ +V+F L+RH+H++ R++EV+ A+ + +I+
Sbjct: 190 LCVDGVILLKHPTGRNNGDCLVKFATSHDALGGLQRHRHYMGSRFVEVSPASEQQWIDCG 249
Query: 423 G-------------------GNNNEAQAFLTRGAQ---------------VIIRMRGLPY 448
G G N+ +R + ++ L
Sbjct: 250 GSVDIKDEVHFRSEERSPQRGINDAHSKKRSRSKSPRRVKRRSRSPHKYGFYVHLKNLSL 309
Query: 449 ECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHK 508
+ + +FF S + + F+ K D K TG AFV+F+ + + AL+ HK
Sbjct: 310 SVEKRDIKNFFRDTDLAS-------DQIKFLYK-DQKRTGSAFVMFKTLRDYNSALALHK 361
Query: 509 ESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLP 568
+I R + + KTM + + ++P ++P
Sbjct: 362 ------FILFHRQVL--IDPISKKTMLKFIECYEKKRSGSVGRERPG----------HIP 403
Query: 569 QHIITSGTR--KDCIRLRGLPYEALCILMDIFFVG 601
+ G K CI +R P++ + + FF G
Sbjct: 404 EKNYREGHSGPKLCIYIRNFPFDVTKVEVQKFFAG 438
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF + N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVIAGPVDIRHFF-----SGLNIPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S+ I +ELF S+ E+Q +
Sbjct: 52 DARRAMSRSGGFIKDSPVELFLSSKTEMQNTI 83
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG P+ +QV +F + + F K DG+ +G +V E
Sbjct: 288 EFTVKLRGAPFNVKEQQVKEFM---------MPLKPVAIRFAKNSDGRNSGYVYVDLRSE 338
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKN 539
E ++AL K+ +G RYIE+FR+ + + +K E+ KN
Sbjct: 339 AEVERALRLDKDYMGGRYIEVFRANNFKNDRRSSKRSEMEKN 380
>gi|301609832|ref|XP_002934459.1| PREDICTED: RNA-binding protein 12B-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 683
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + + FF + ++ DG GV G G+AF++F +E
Sbjct: 27 VVIRLQGLPVVAGSTDIRHFF-----SGLHIPDG--GVHIT----GGKIGEAFIIFATDE 75
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S+ I IELF S+ AE+Q L
Sbjct: 76 DARRAMSRSGGFIKKSRIELFLSSKAEMQHTL 107
>gi|379642961|ref|NP_001243849.1| RNA-binding protein 12B [Equus caballus]
Length = 976
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRIGRERPGSGA 100
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
L H+ +G R+IE+ + + + + K ++
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEQQWIEFGGKAVK 242
>gi|26343509|dbj|BAC35411.1| unnamed protein product [Mus musculus]
Length = 521
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K VI+F + + V+ G TG FV EEE
Sbjct: 294 TVKLRGAPFNVTEKNVIEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDLSSEEE 344
Query: 500 ADKALSKHKESIGIRYIELFRSTTA 524
KAL +++ +G RYIE+FR A
Sbjct: 345 VKKALKCNRDYMGGRYIEVFREKQA 369
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 299 TVKLRGAPFNVTEKNVVEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSSEEE 349
Query: 500 ADKALSKHKESIGIRYIELFR 520
KAL +++ +G RYIE+FR
Sbjct: 350 VKKALKCNRDYMGGRYIEVFR 370
>gi|118778307|ref|XP_308564.3| AGAP007221-PB [Anopheles gambiae str. PEST]
gi|116132320|gb|EAA04285.4| AGAP007221-PB [Anopheles gambiae str. PEST]
Length = 787
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A V FF+ ++ DG GV V G A GDAF+ F +E
Sbjct: 3 VIIRLQNLPLAANASDVRSFFKG-----LSIPDG--GVHIV----GGALGDAFIAFSTDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+A +A++ + I I L S+ AE+Q+V+ + +
Sbjct: 52 DARQAMALNGGCIKNEPISLLLSSRAEMQKVIEQARK 88
>gi|410987464|ref|XP_004000021.1| PREDICTED: RNA-binding protein 12B [Felis catus]
Length = 999
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
V+IR+ GLP+ + FF T + +++ GE G F+ AF++F
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFCXXXXXXXAFIIFAT 62
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+E+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 63 DEDARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRIGRERPGSGA 113
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 172 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 222
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 223 GLKCHRSFMGSRFIEV 238
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG P+ +QV +F + + F K DG+ +G +V E
Sbjct: 289 EFTVKLRGAPFNVKEQQVKEFM---------MPLKPVAIRFAKNSDGRNSGYVYVDLRSE 339
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKN 539
E ++AL K+ +G RYIE+FR+ + + K E+ KN
Sbjct: 340 AEVERALRLDKDYMGGRYIEVFRANNFKNDRRSAKRSEMEKN 381
>gi|328909179|gb|AEB61257.1| heterogeneous nuclear ribonucleoprotein F-like protein, partial
[Equus caballus]
Length = 113
Score = 46.2 bits (108), Expect = 0.050, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNN 540
PDG+ TG+A V F EEA A+SK + ++ RYIELF STT + M
Sbjct: 22 PDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGV 81
Query: 541 SLTSSNNGLSAQ 552
S S+ +GL +Q
Sbjct: 82 SAQSTYSGLESQ 93
>gi|156087661|ref|XP_001611237.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798491|gb|EDO07669.1| hypothetical protein BBOV_III001020 [Babesia bovis]
Length = 837
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 16/91 (17%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
++ ++GLPY+C ++D+ +S +++D V+ +K +G TGDA+V
Sbjct: 142 DALLYLKGLPYDCVESDILDWL-----SSYSIVD----VILIKNEEGCFTGDAYVRCSTL 192
Query: 498 EEADKALSKHKE----SIGIRYIELFRSTTA 524
E D+ H+E +G+RYI ++R T +
Sbjct: 193 SERDRV---HREMSGKYLGLRYIPIYRLTES 220
>gi|440906243|gb|ELR56528.1| RNA-binding protein 12B [Bos grunniens mutus]
Length = 977
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAVSRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRMGRERPGSGA 100
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAE 525
L H+ +G R+IE+ + + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEKQ 232
>gi|301762464|ref|XP_002916650.1| PREDICTED: RNA-binding protein 12B-like [Ailuropoda melanoleuca]
gi|281349037|gb|EFB24621.1| hypothetical protein PANDA_004747 [Ailuropoda melanoleuca]
Length = 985
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRIGRERPGSGA 100
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|194673041|ref|XP_881008.3| PREDICTED: RNA-binding protein 12B isoform 4 [Bos taurus]
gi|297482529|ref|XP_002692866.1| PREDICTED: RNA-binding protein 12B [Bos taurus]
gi|296480442|tpg|DAA22557.1| TPA: RNA binding motif protein 12-like [Bos taurus]
Length = 984
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAVSRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRMGRERPGSGA 100
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAE 525
L H+ +G R+IE+ + + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEKQ 232
>gi|426235843|ref|XP_004023424.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12B-like [Ovis
aries]
Length = 983
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAVSRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRMGRERPGSGA 100
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAE 525
L H+ +G R+IE+ + + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEKQ 232
>gi|345793203|ref|XP_544177.3| PREDICTED: RNA-binding protein 12B [Canis lupus familiaris]
Length = 994
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMRRTDRIGRERPGSGA 100
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|25013120|gb|AAN71659.1| SD14463p [Drosophila melanogaster]
Length = 359
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I MRGLPY V FFE NV + + KK T DA+ F+ E++
Sbjct: 256 IHMRGLPYTSFENDVFKFFEP--IRPANVR-----INYNKKGLHSGTADAY--FDTYEDS 306
Query: 501 DKALSKHKESIGIRYIELF 519
A+ +H+E +G RYIELF
Sbjct: 307 QVAMKRHREQMGSRYIELF 325
>gi|225459201|ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 446 LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALS 505
LPY+ AK + +FF +G +CNV+ E V+F + P +++G FV F +EEAD ALS
Sbjct: 190 LPYQARAKDLREFFSSG---NCNVVSAE--VIFHENPR-RSSGYGFVSFGSKEEADTALS 243
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 446 LPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALS 505
LPY+ AK + +FF +G +CNV+ E V+F + P +++G FV F +EEAD ALS
Sbjct: 190 LPYQARAKDLREFFSSG---NCNVVSAE--VIFHENPR-RSSGYGFVSFGSKEEADTALS 243
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 298 TVKLRGAPFNVTEKNVLEFLAPLRPVAIRI---------VRNAHGNKTGYIFVDFRSEEE 348
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 349 IKQALKCNREYMGGRYIEIFR 369
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG P+ +QV +F + + F K DG+ +G +V E
Sbjct: 289 EFTVKLRGAPFNVKEQQVKEFM---------MPLKPVAIRFAKNSDGRNSGYVYVDLRSE 339
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKN 539
E ++AL K+ +G RYIE+FR+ + + K E+ KN
Sbjct: 340 AEVERALRLDKDYMGGRYIEVFRANNFKNDRRSAKRSEMEKN 381
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG P+ +QV +F + + F K DG+ +G +V E
Sbjct: 288 EFTVKLRGAPFNVKEQQVKEFM---------MPLKPVAIRFAKNSDGRNSGYVYVDLRSE 338
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKN 539
E ++AL K+ +G RYIE+FR+ + + K E+ KN
Sbjct: 339 AEVERALRLDKDYMGGRYIEVFRANNFKNDRRSAKRSEMEKN 380
>gi|242022416|ref|XP_002431636.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212516944|gb|EEB18898.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 966
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 339 ALCPLVQNIWLSLLLNTIPGYEQVLGL--GGVALCLSAFGRRNGEAIVRFIDQEHRDMAL 396
+ C L++N+ L I + +GL + L L G+ +G+A F D + A
Sbjct: 782 STCVLMKNLPLEANDRDICDFFSDIGLVPNKIHLMLDTSGQPSGDAFCEFSDLNQAEKAC 841
Query: 397 KRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT-----RGAQVIIRMRGLPYECT 451
++ H+ K + VTK + + + G + NE + Q ++ + +P+
Sbjct: 842 TKNSAHLGKNIVSVTKVHQSEMMEALGVSKNEKNKIPSLMESFGRPQCVVTLENIPFRAE 901
Query: 452 AKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD-GKATGDAFVLFEKEEEADKAL 504
+I+FF S N+ E +F + D G+ TGD V F+ E+A +A+
Sbjct: 902 IFDIINFFGW----SYNLT---ESDIFRRYNDKGQPTGDGKVCFKTPEDALRAI 948
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP+ + + +F ++ +G GV V G GDAF+ F +E
Sbjct: 3 VIIRLQNLPWSANSLDIRHYFRG-----LSIPEG--GVHIV----GGEMGDAFIAFSTDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+A +A+ I I L S+ +E+Q+++ + +NSL L
Sbjct: 52 DARQAMMLAGGKIKEVQISLMLSSRSEMQKIIEAARQASMSNSLA-----------QLLA 100
Query: 559 LAQVPVPYLPQHIITSGTRKDC 580
+ V +P + Q I S R+D
Sbjct: 101 PSAVSMPPITQQQIASKERRDS 122
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 308 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 358
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 359 VKQALKCNREYMGGRYIEVFR 379
>gi|361069401|gb|AEW09012.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172127|gb|AFG69420.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172129|gb|AFG69421.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172131|gb|AFG69422.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172133|gb|AFG69423.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172135|gb|AFG69424.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172137|gb|AFG69425.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172139|gb|AFG69426.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172141|gb|AFG69427.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172143|gb|AFG69428.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172145|gb|AFG69429.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172147|gb|AFG69430.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172149|gb|AFG69431.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172151|gb|AFG69432.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172153|gb|AFG69433.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172155|gb|AFG69434.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172157|gb|AFG69435.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172159|gb|AFG69436.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
gi|383172161|gb|AFG69437.1| Pinus taeda anonymous locus CL3158Contig1_03 genomic sequence
Length = 109
Score = 45.8 bits (107), Expect = 0.070, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 16/83 (19%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQ--------AFLTRGAQ------ 438
D AL+R + ++ +RYIEV + +D+ N NE + + ++G+
Sbjct: 11 DFALQRDRQNMGRRYIEVFRCKKQDYYNAIAAEVNEPKGADDPAPPSSFSKGSSDKDHME 70
Query: 439 --VIIRMRGLPYECTAKQVIDFF 459
I+++RGLP+ + + +IDFF
Sbjct: 71 HTGILKLRGLPFSVSKRDIIDFF 93
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|222615465|gb|EEE51597.1| hypothetical protein OsJ_32850 [Oryza sativa Japonica Group]
Length = 340
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP++C + FF +++D L V K +G+ TG+AFV+F +A
Sbjct: 224 VRLRGLPFDCDDLDIFKFFVG-----LDIVD----CLLVHK-NGRFTGEAFVVFPSAMQA 273
Query: 501 DKALSKHKESIGIRYIE 517
+ AL ++++++G R+ +
Sbjct: 274 EFALHRNRQNMGRRWYK 290
>gi|355715636|gb|AES05391.1| RNA binding motif protein 19 [Mustela putorius furo]
Length = 823
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV EEE
Sbjct: 299 TVKLRGAPFNVTEKNVTEFLAPLRPVAIRI---------VRNAHGNKTGYIFVDLSSEEE 349
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
+AL H+E +G RYIE+FR Q K+ P
Sbjct: 350 VKQALRCHREYMGGRYIEVFREKNVPTAQAPLKSSARP 387
>gi|390332535|ref|XP_001184447.2| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 513
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I+MRG+P+ + V+ FF + + E+G + TG FV F E++
Sbjct: 374 IKMRGVPFNVKEEDVVKFFAPLSMKTIRAPLNEKG---------QRTGVIFVEFASEDDI 424
Query: 501 DKALSKHKESIGIRYIELFR 520
KA+ +++E +G RY+ELFR
Sbjct: 425 TKAMKRNREYMGRRYVELFR 444
>gi|444525890|gb|ELV14185.1| RNA-binding protein 12B [Tupaia chinensis]
Length = 1012
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ V FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDVRHFFTGLT-----IPDG--GVHII----GGEVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ ++ + G A
Sbjct: 52 DARRAISRSGGLIKNSSVELFLSSKAEMQ----KTIEMKRSGHIGRGRLGSGA 100
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGS 229
>gi|350036612|dbj|GAA34386.1| RNA-binding protein 12 [Clonorchis sinensis]
Length = 964
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A + FF + E GV V G GDAF+ F +E
Sbjct: 3 VIIRLQNLPMSANASNIRRFF-------GGLAIPEGGVHIV----GGTDGDAFIAFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A KA+ +++I + LF S+ E+Q V+
Sbjct: 52 DARKAMLLDRQAINGAPVRLFLSSKTEMQSVI 83
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K V +F + + V+ G TG FV EEE
Sbjct: 295 VKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDLSSEEEV 345
Query: 501 DKALSKHKESIGIRYIELFR 520
KAL ++E +G RYIE+FR
Sbjct: 346 KKALKCNREYMGGRYIEVFR 365
>gi|321463278|gb|EFX74295.1| hypothetical protein DAPPUDRAFT_307392 [Daphnia pulex]
Length = 929
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP+ A + FF + E GV V G GDAF+ F +E
Sbjct: 3 VIIRLQNLPWSANAADIRQFFHG-------LSIPEGGVHIV----GGQLGDAFIAFSTDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
+A + ++ + ++L+ S+ E+Q+++ +T +
Sbjct: 52 DARQGMASDGGMLKDSRVKLYLSSRTEMQKIIEETRQ 88
>gi|449284118|gb|EMC90699.1| RNA-binding protein 12B [Columba livia]
Length = 698
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RG+PY T +V FF + +V +GV+ +K +G + GD V F +A +
Sbjct: 178 LRGIPYSATEDEVRAFF-----SGIHV----DGVILIKHRNGLSNGDCLVKFATPGDALE 228
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
L +H++ +G R+IE+ +T E T+++P
Sbjct: 229 GLQRHRQYMGQRFIEI-SPSTEERWIEYGGTVDMP 262
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVVAGPADIRRFFLG-----LNIPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S I IELF S+ AE+Q +
Sbjct: 52 DARRAMSCSGGFIKDSRIELFLSSKAEMQNTI 83
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 333 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 383
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 384 VKQALKCNREYMGGRYIEVFR 404
>gi|75071008|sp|Q5RFT7.1|RB12B_PONAB RecName: Full=RNA-binding protein 12B; AltName: Full=RNA-binding
motif protein 12B
gi|55725003|emb|CAH89370.1| hypothetical protein [Pongo abelii]
Length = 761
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF C +GV+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFFSG----LCV-----DGVIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGS 229
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG+P+ +Q+ +F + + E G+ TG +V E
Sbjct: 287 EFTVKLRGVPFSVKEQQIKEFMTPLRPAAIRIGKNE---------SGQRTGYVYVDLHSE 337
Query: 498 EEADKALSKHKESIGIRYIELFR 520
EE +KAL K+K+ IG RYIE+F+
Sbjct: 338 EEVNKALKKNKDYIGGRYIEVFK 360
>gi|432106419|gb|ELK32212.1| RNA-binding protein 12B [Myotis davidii]
Length = 954
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 15/115 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ V FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDVRHFFTGLT-----IPDG--GVHII----GGEMGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQ 553
+A +A+S+ I +ELF S+ AE+Q++L E+ + + + G A +
Sbjct: 52 DARRAVSRSGGFIKDSSVELFLSSKAEMQKIL----EMKRTDHIGRERPGSGASR 102
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ G A V F +A
Sbjct: 159 LRGLPYVVNEDDVRVFF------SGLCVDG---VIFLKHDDGRNNGHAMVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 210 GLKCHRSYMGSRFIEVMQGS 229
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|74355899|gb|AAI03655.1| Grsf1 protein, partial [Rattus norvegicus]
Length = 142
Score = 45.4 bits (106), Expect = 0.095, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP++ A+ +I+FF + GKATG+A V F+ E+A
Sbjct: 65 VHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKATGEADVHFDTHEDA 115
Query: 501 DKALSKHKESIGIRYIELF 519
A+ K + + RYIELF
Sbjct: 116 VAAMLKDRSHVQHRYIELF 134
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>gi|148233440|ref|NP_001079497.1| uncharacterized protein LOC379184 [Xenopus laevis]
gi|27694912|gb|AAH43858.1| MGC53694 protein [Xenopus laevis]
gi|80477878|gb|AAI08882.1| MGC53694 protein [Xenopus laevis]
Length = 658
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
NE L + + GLPY V +FF +V D + F + +G
Sbjct: 140 NEGTMPLKENGYGYVFLNGLPYTADEHDVKEFFHG-----FDVED----INFCVRQNGDK 190
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
G A+V F ++A +LS+HKE IG RYI L S + ++KT
Sbjct: 191 DGKAYVKFATFQDAKASLSRHKEYIGHRYIFLKLSNEHAWIEAVSKT 237
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + + FF + ++ +G GV G G+AF++F +E
Sbjct: 3 VVIRLQGLPLVAGSTDIRHFF-----SGLHIPEG--GVHIT----GGKHGEAFIIFPTDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S I I+LF S+ AE+Q L
Sbjct: 52 DARRAMSCSGGFIKKSQIDLFLSSKAEMQHTL 83
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 349 LSLLLNTIPGYEQVLGLGGVALCLSAFG----RRNGEAIVRFIDQEHRDMALKRHKHHID 404
LS + NT E G + C+ R G V F D ++ + L+ H +D
Sbjct: 11 LSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKVLQSGPHKLD 70
Query: 405 KRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
+ I+ A + + Q +TR +V + G+ T + + +FE +
Sbjct: 71 DKNIDAKVAYPK----------KQRQKLVTRTKKVFVG--GIATNTTTEDITKYFETFGQ 118
Query: 465 NSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
E+ +L K + G FV+FE E+ ADKA H I + +E+ + A
Sbjct: 119 I-------EDAMLMFDKSTQRHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKK---A 168
Query: 525 EVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYL 567
+ ++V++ K + T+ N G+ + + + VPY+
Sbjct: 169 QPKEVMHSQTSGTKGHLKTNHNRGI---RKLSCSSYTISVPYV 208
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V +F + + V+ G TG FV F EEE
Sbjct: 333 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 383
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 384 VKQALKCNREYMGGRYIEVFR 404
>gi|242027152|ref|XP_002433318.1| hypothetical protein Phum_PHUM625080 [Pediculus humanus corporis]
gi|212519117|gb|EEB20580.1| hypothetical protein Phum_PHUM625080 [Pediculus humanus corporis]
Length = 88
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQ 389
GGVALCLS GRRNGEA+VRF++Q
Sbjct: 64 GGVALCLSPAGRRNGEALVRFVNQ 87
>gi|332830801|ref|XP_003311886.1| PREDICTED: RNA-binding protein 12B isoform 1 [Pan troglodytes]
gi|332830803|ref|XP_003339206.1| PREDICTED: RNA-binding protein 12B [Pan troglodytes]
gi|332830805|ref|XP_003311887.1| PREDICTED: RNA-binding protein 12B isoform 2 [Pan troglodytes]
gi|332830807|ref|XP_003311889.1| PREDICTED: RNA-binding protein 12B isoform 4 [Pan troglodytes]
gi|332830809|ref|XP_003311890.1| PREDICTED: RNA-binding protein 12B isoform 5 [Pan troglodytes]
gi|410041995|ref|XP_003951348.1| PREDICTED: RNA-binding protein 12B [Pan troglodytes]
gi|410222496|gb|JAA08467.1| RNA binding motif protein 12B [Pan troglodytes]
gi|410266932|gb|JAA21432.1| RNA binding motif protein 12B [Pan troglodytes]
gi|410301828|gb|JAA29514.1| RNA binding motif protein 12B [Pan troglodytes]
gi|410338931|gb|JAA38412.1| RNA binding motif protein 12B [Pan troglodytes]
Length = 1001
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|291388277|ref|XP_002710735.1| PREDICTED: RNA binding motif protein 12-like [Oryctolagus
cuniculus]
Length = 864
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGDVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+++ + + + G A
Sbjct: 52 DARRAISRSGGYIKDSSVELFLSSRAEMQ----KTIQMKRTDRVGRGRPGSGA 100
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTM---ELPKNNSLTSSNNGLSAQQPMLSH 558
L H+ +G R+IE+ + + + ++ T+ ++P + S G+ SH
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEEQWIELGGNTIKEDDVPMRSEEHSPARGIDRHFRKRSH 268
>gi|397500945|ref|XP_003821163.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12B [Pan
paniscus]
Length = 1001
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|118722349|ref|NP_976324.2| RNA-binding protein 12B [Homo sapiens]
gi|215273872|sp|Q8IXT5.2|RB12B_HUMAN RecName: Full=RNA-binding protein 12B; AltName: Full=RNA-binding
motif protein 12B
Length = 1001
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|417405481|gb|JAA49451.1| Putative conserved secreted protein precursor [Desmodus rotundus]
Length = 976
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPADIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDHKGRERPGSGA 100
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGS 229
>gi|380786971|gb|AFE65361.1| RNA-binding protein 12B [Macaca mulatta]
Length = 1001
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|332238333|ref|XP_003268351.1| PREDICTED: RNA-binding protein 12B isoform 1 [Nomascus leucogenys]
gi|332238335|ref|XP_003268352.1| PREDICTED: RNA-binding protein 12B isoform 2 [Nomascus leucogenys]
gi|332238337|ref|XP_003268353.1| PREDICTED: RNA-binding protein 12B isoform 3 [Nomascus leucogenys]
gi|441647142|ref|XP_004090789.1| PREDICTED: RNA-binding protein 12B [Nomascus leucogenys]
gi|441647145|ref|XP_004090790.1| PREDICTED: RNA-binding protein 12B [Nomascus leucogenys]
Length = 1001
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|297683295|ref|XP_002819319.1| PREDICTED: RNA-binding protein 12B isoform 2 [Pongo abelii]
gi|297683297|ref|XP_002819320.1| PREDICTED: RNA-binding protein 12B isoform 3 [Pongo abelii]
gi|395739892|ref|XP_003777333.1| PREDICTED: RNA-binding protein 12B [Pongo abelii]
gi|395739895|ref|XP_003777334.1| PREDICTED: RNA-binding protein 12B [Pongo abelii]
Length = 1001
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T + V +F V + + G TG FV EEE
Sbjct: 281 VKLRGAPFNVTEQNVREFL---------VPLKPVAIRIARNTYGNKTGYVFVDLNSEEEV 331
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
KAL ++K+ +G RYIE+FR + V KT P
Sbjct: 332 QKALKRNKDYMGGRYIEVFRDNYTKSPSVPQKTQSRP 368
>gi|297299765|ref|XP_002808531.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12B-like
[Macaca mulatta]
Length = 1001
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|357606436|gb|EHJ65060.1| hypothetical protein KGM_21836 [Danaus plexippus]
Length = 58
Score = 44.7 bits (104), Expect = 0.13, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 6 YYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
+ C V TAGL G LGSDE+E++ L YV+ID N+V
Sbjct: 6 WVCALNVRTAGLGGAALGSDEEEVVYLAYVVIDVLTNQV 44
>gi|426360209|ref|XP_004047340.1| PREDICTED: RNA-binding protein 12B isoform 1 [Gorilla gorilla
gorilla]
gi|426360211|ref|XP_004047341.1| PREDICTED: RNA-binding protein 12B isoform 2 [Gorilla gorilla
gorilla]
gi|426360213|ref|XP_004047342.1| PREDICTED: RNA-binding protein 12B isoform 3 [Gorilla gorilla
gorilla]
gi|426360215|ref|XP_004047343.1| PREDICTED: RNA-binding protein 12B isoform 4 [Gorilla gorilla
gorilla]
gi|426360217|ref|XP_004047344.1| PREDICTED: RNA-binding protein 12B isoform 5 [Gorilla gorilla
gorilla]
gi|426360219|ref|XP_004047345.1| PREDICTED: RNA-binding protein 12B isoform 6 [Gorilla gorilla
gorilla]
Length = 1001
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|355698096|gb|EHH28644.1| RNA-binding motif protein 12B [Macaca mulatta]
gi|355779824|gb|EHH64300.1| RNA-binding motif protein 12B [Macaca fascicularis]
gi|383409041|gb|AFH27734.1| RNA-binding protein 12B [Macaca mulatta]
Length = 1001
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|348588498|ref|XP_003480003.1| PREDICTED: RNA-binding protein 12B-like [Cavia porcellus]
Length = 850
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGDIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+ + I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAICRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRIERGRPGSGA 100
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
L H+ +G R+IE+ + + + + +E
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSERQWIEFGGDAIE 242
>gi|402878712|ref|XP_003903017.1| PREDICTED: RNA-binding protein 12B isoform 1 [Papio anubis]
gi|402878714|ref|XP_003903018.1| PREDICTED: RNA-binding protein 12B isoform 2 [Papio anubis]
Length = 1001
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|351713473|gb|EHB16392.1| RNA-binding protein 12B [Heterocephalus glaber]
Length = 959
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGDIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRIDRIGRGRPGSGA 100
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQVLN---KTMELPKNNSLTSSNNGLSAQQ 553
L H+ +G R+IE+ + + + + K E+P S GL+ +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGSEQQWIECGGDAVKKGEIPMRAEEHSPPRGLNDRH 263
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T + V +F V + V+ G TG FV F E +
Sbjct: 287 VKLRGAPFNVTEQNVREFL---------VPLKPVAIRIVRNAHGNKTGYVFVDFSSEGDV 337
Query: 501 DKALSKHKESIGIRYIELFR 520
+KAL +KE +G RYIE+FR
Sbjct: 338 EKALKHNKEYMGGRYIEVFR 357
>gi|395818217|ref|XP_003782532.1| PREDICTED: RNA-binding protein 12B isoform 3 [Otolemur garnettii]
Length = 996
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 13 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGKIGEAFIIFATDE 61
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+++ + + + G A
Sbjct: 62 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIDVKRTDRVGRGRPGSGA 110
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 169 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 219
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 220 GLKCHRSFMGSRFIEVMQGS 239
>gi|395818213|ref|XP_003782530.1| PREDICTED: RNA-binding protein 12B isoform 1 [Otolemur garnettii]
gi|395818215|ref|XP_003782531.1| PREDICTED: RNA-binding protein 12B isoform 2 [Otolemur garnettii]
Length = 986
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGKIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ AE+Q KT+++ + + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIDVKRTDRVGRGRPGSGA 100
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCIDASG 209
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGS 229
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG+P+ +Q+ +F + + K G TG +V EE+
Sbjct: 307 VKLRGVPFNVKEQQIREFMTPLKPAAIRIG---------KNDSGNRTGYVYVDLHSEEQV 357
Query: 501 DKALSKHKESIGIRYIELFR 520
+KAL K+K+ IG RYIE+FR
Sbjct: 358 EKALKKNKDYIGGRYIEVFR 377
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 415 GEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
GE + G NE T +++RG P+ T + V +F V
Sbjct: 274 GEKMEGLKKGGANEPTTSYT------VKLRGAPFNVTEQNVREFL---------VPLRPV 318
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ V+ G TG FV F EEE KAL ++ E +G RYIELF
Sbjct: 319 AIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRNHEYMGGRYIELF 363
>gi|395744950|ref|XP_002823898.2| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pongo
abelii]
Length = 302
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 21/160 (13%)
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
V +CLS R G V F+DQ D L + +H +D + I+ A
Sbjct: 1 VTICLSLTTARRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA-----------FPR 49
Query: 428 EAQ-AFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
AQ +TR ++ + GL T + V +FE ++ +L K +
Sbjct: 50 RAQPKMVTRTKKIFV--GGLSVNTTVEDVKQYFE-------QFGKVDDAMLMFDKTTNRH 100
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
G FV FE E+ +K H I + +E ++ EV
Sbjct: 101 RGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEV 140
>gi|71896463|ref|NP_001026115.1| RNA-binding protein 12B [Gallus gallus]
gi|53136630|emb|CAG32644.1| hypothetical protein RCJMB04_31o3 [Gallus gallus]
Length = 698
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVVAGPADIRRFFLG-----LNIPDG--GVHII----GGEMGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S I IELF S+ AE+Q +
Sbjct: 52 DARRAMSCSGGFIKDSRIELFLSSKAEMQNTI 83
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RG+PY T V DF + V +GV+ +K +G G+ V F +A +
Sbjct: 178 LRGIPYSATEDAVRDFL-----SGIRV----DGVILIKHRNGLNNGNCLVKFATPGDALE 228
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQV 529
L +H++ +G R+IE+ S T E + +
Sbjct: 229 GLKRHRQYMGQRFIEI--SPTTEERWI 253
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T + V +F V + + G TG FV EEE
Sbjct: 281 VKLRGAPFNVTEQNVKEFL---------VPLKPVAIRIARNTYGNKTGYVFVDLSSEEEV 331
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLA 560
KAL ++K+ +G RYIE+FR + V +K P + QQ LS
Sbjct: 332 QKALKRNKDYMGGRYIEVFRDNYTKSPSVQSKAESRP-----WEQRDKQELQQEDLSESG 386
Query: 561 QVPVPYLP 568
++ V LP
Sbjct: 387 RLFVRNLP 394
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 415 GEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
GE + G NE T +++RG P+ T + V +F V
Sbjct: 274 GEKMEGLKKGGANEPTTSYT------VKLRGAPFNVTEQNVREFL---------VPLRPV 318
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ V+ G TG FV F EEE KAL ++ E +G RYIELF
Sbjct: 319 AIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRNHEYMGGRYIELF 363
>gi|170057361|ref|XP_001864450.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167876772|gb|EDS40155.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 1174
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+ M LP+ + ++DFF+ + + + D + L PDG++TGDA V F+ ++
Sbjct: 1098 ILSMGNLPFRARNEDIVDFFK---QYNITLDDVKRRYL----PDGRSTGDAMVRFQSPQD 1150
Query: 500 ADKALSKHKE-SIGIRYIELF 519
A +AL H++ IG R + ++
Sbjct: 1151 AHRALETHQQMRIGGRELRMW 1171
>gi|326917887|ref|XP_003205226.1| PREDICTED: RNA-binding protein 12B-like [Meleagris gallopavo]
Length = 671
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVVAGPADIRRFFLG-----LNIPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S I IELF S+ AE+Q +
Sbjct: 52 DARRAMSCSGGFIKDSRIELFLSSKAEMQNTI 83
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RG+PY T V DF + V +GV+ +K +G G+ V F +A +
Sbjct: 178 LRGIPYSATEDAVRDFL-----SGIRV----DGVILIKHRNGLNNGNCLVKFATPGDALE 228
Query: 503 ALSKHKESIGIRYIELFRSTTAEVQQV 529
L +H++ +G R+IE+ S T E + +
Sbjct: 229 GLKRHRQYMGQRFIEI--SPTTEERWI 253
>gi|119612105|gb|EAW91699.1| RNA binding motif protein 12B [Homo sapiens]
Length = 707
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG F F EEE
Sbjct: 332 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFADFSNEEE 382
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 383 VKQALKCNREYMGGRYIEVFR 403
>gi|224046497|ref|XP_002200032.1| PREDICTED: RNA-binding protein 12B isoform 1 [Taeniopygia guttata]
gi|449494411|ref|XP_004175301.1| PREDICTED: RNA-binding protein 12B isoform 2 [Taeniopygia guttata]
Length = 699
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF N+ DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPVVAGPPDIRRFFLG-----LNIPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S I IELF S+ AE+Q +
Sbjct: 52 DARRAMSCSGGFIKDSRIELFLSSKAEMQNTI 83
>gi|109476157|ref|XP_001054639.1| PREDICTED: RNA-binding protein 12B-A-like [Rattus norvegicus]
Length = 843
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPFIAGPVDIRHFFKGLT-----IPDG--GVHVI----GGKAGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+A +A+S+ I +ELF S+ E+Q+ ++
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQKTID 84
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|62648675|ref|XP_232819.3| PREDICTED: RNA-binding protein 12B-A-like [Rattus norvegicus]
gi|109476143|ref|XP_001053414.1| PREDICTED: RNA-binding protein 12B-A-like [Rattus norvegicus]
Length = 843
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLQGLPFIAGPVDIRHFFKGLT-----IPDG--GVHVI----GGKAGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+A +A+S+ I +ELF S+ E+Q+ ++
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQKTID 84
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|26327221|dbj|BAC27354.1| unnamed protein product [Mus musculus]
Length = 82
Score = 43.9 bits (102), Expect = 0.24, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+A +A+S+ I +ELF S+ E+Q+
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQK 81
>gi|403295801|ref|XP_003938814.1| PREDICTED: RNA-binding protein 12B [Saimiri boliviensis
boliviensis]
Length = 1001
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+A +A+S+ I +ELF S+ AE+Q+ ++
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQKTID 84
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IRMRGLPY+ + K V FF ++ ++ K + +G AFV E +
Sbjct: 248 IRMRGLPYDASEKHVHKFFSPIQLSNIRLL---------KDDRERCSGLAFVDVMSETDL 298
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+A+ ++K +G RYIEL T ++ + V K+
Sbjct: 299 KEAMKRNKGRMGRRYIELVVDTGSKEKTVKEKS 331
>gi|296226920|ref|XP_002759119.1| PREDICTED: RNA-binding protein 12B isoform 1 [Callithrix jacchus]
gi|296226922|ref|XP_002759120.1| PREDICTED: RNA-binding protein 12B isoform 2 [Callithrix jacchus]
gi|390475792|ref|XP_003735019.1| PREDICTED: RNA-binding protein 12B [Callithrix jacchus]
gi|390475794|ref|XP_003735020.1| PREDICTED: RNA-binding protein 12B [Callithrix jacchus]
gi|390475796|ref|XP_003735021.1| PREDICTED: RNA-binding protein 12B [Callithrix jacchus]
Length = 1001
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLN 531
+A +A+S+ I +ELF S+ AE+Q+ ++
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQKTID 84
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P T +++ +FF + + + K GK+TG FV + E E
Sbjct: 309 VKLRGAPLNVTEQKIREFF-----SPLKPL----AIRMGKNTQGKSTGFIFVDLKSEAEV 359
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
KAL + KE IG +Y+E+ R A + V KT + P
Sbjct: 360 QKALKRKKEYIGGQYVEVSRCENAPKETVTAKTDDQP 396
>gi|91094045|ref|XP_968644.1| PREDICTED: similar to CG7879 CG7879-PA [Tribolium castaneum]
gi|270003124|gb|EEZ99571.1| hypothetical protein TcasGA2_TC001555 [Tribolium castaneum]
Length = 779
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGT--ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
VIIR++ LP+ A + FF + E +++ GE+G DAF+ F
Sbjct: 3 VIIRLQNLPWSANALDIRQFFHGLSIPEGGVHIVGGEQG-------------DAFIAFST 49
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+E+A +A +++ I I L S+ E+Q+V+
Sbjct: 50 DEDARQAFARNNGKIKEIQISLMLSSRTEMQKVI 83
>gi|170056280|ref|XP_001863959.1| RNA-binding protein 28 [Culex quinquefasciatus]
gi|167876028|gb|EDS39411.1| RNA-binding protein 28 [Culex quinquefasciatus]
Length = 663
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 12/78 (15%)
Query: 429 AQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA-GTENSCNVMDGEEGVLFVKKPDGKAT 487
++ F+ R ++I+R + Y+ T K++ + FE GT N++ K+PDG+
Sbjct: 57 SREFIHRQCRLIVR--NVSYQITDKKLREAFEKFGTLEEVNIL---------KRPDGRLV 105
Query: 488 GDAFVLFEKEEEADKALS 505
G AF+ + K+EE+DKA++
Sbjct: 106 GCAFLQYTKKEESDKAIA 123
>gi|268566957|ref|XP_002639856.1| Hypothetical protein CBG12209 [Caenorhabditis briggsae]
Length = 965
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP A V FF + DG ++ G G+ FV F +E
Sbjct: 3 VIIRLKNLPMTAAAADVRTFFSG-----LKIPDGAVHII------GGDEGEVFVGFASDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+A A+++ + I I LF S+ +E V+ KN S S +H
Sbjct: 52 DARLAMARDRAKIHGAEIRLFLSSKSEQSSVIAAR----KNASYASPEPHDQHVPSAFTH 107
Query: 559 LAQVPVPYLPQHI 571
AQ + PQH
Sbjct: 108 SAQFQQDWKPQHT 120
>gi|159164255|pdb|2DNN|A Chain A, Solution Structure Of Rna Binding Domain In Rna-Binding
Protein 12
Length = 109
Score = 43.5 bits (101), Expect = 0.31, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 332 PTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEH 391
P P NP L V + S + N + + L + V L GR NG +V+F+ +
Sbjct: 9 PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQD 68
Query: 392 RDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
ALKR++ + +RY+EV+ A ++ G
Sbjct: 69 TFEALKRNRMLMIQRYVEVSPATERQWVAAGG 100
>gi|148673677|gb|EDL05624.1| mCG123728, isoform CRA_a [Mus musculus]
gi|148673678|gb|EDL05625.1| mCG123728, isoform CRA_a [Mus musculus]
gi|148673679|gb|EDL05626.1| mCG123728, isoform CRA_a [Mus musculus]
Length = 834
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|303275530|ref|XP_003057059.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461411|gb|EEH58704.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 386
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA-GTENSCNVMDGEEGV--LFVKKPDGKATGDAFVLFEK 496
I+R+RG+P E T V++FF G E + G+ L P +TG+AFV F
Sbjct: 285 ILRVRGMPPEATKADVVNFFYGMGAEEDKVKIIIAPGMANLAGSHPGAMSTGEAFVEFSG 344
Query: 497 EE-EADKALSKHKESIGIRYIELFRSTTAEVQQV--LNKTM 534
++ +A K + +G + + +FRS+ EVQ+V + +TM
Sbjct: 345 DDANIQQAALKDRAVLGGKPVSVFRSSLEEVQRVALMGRTM 385
>gi|29747798|gb|AAH50844.1| RNA binding motif protein 12B [Mus musculus]
Length = 836
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|51593298|gb|AAH80741.1| C430048L16Rik protein [Mus musculus]
Length = 834
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNDDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|71067349|ref|NP_945195.1| RNA-binding protein 12B-B [Mus musculus]
gi|341941784|sp|Q66JV4.2|R12BB_MOUSE RecName: Full=RNA-binding protein 12B-B; AltName: Full=RNA-binding
motif protein 12B-B
gi|26348891|dbj|BAC38085.1| unnamed protein product [Mus musculus]
Length = 834
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|187953621|gb|AAI37621.1| C430048L16Rik protein [Mus musculus]
Length = 834
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|440797920|gb|ELR18994.1| fibronectin type III domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 740
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++MRGLP+E T + + FF + EGV DG+ TGD FV F +
Sbjct: 681 VVKMRGLPWEVTPEDIARFF-------ATLDIAPEGVSIALNFDGRPTGDGFVCFASADH 733
Query: 500 ADKALSK 506
A AL +
Sbjct: 734 ATLALQR 740
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 374 AFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG--GNNNEAQA 431
A GR G V F D D L+ KHHID R ++V +A + + AG GN N ++
Sbjct: 42 ATGRPRGFGFVAFSDPAVIDRVLQ-DKHHIDNRDVDVKRAMSREEQSPAGRSGNFNASRN 100
Query: 432 FLTRGAQVIIR---MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
F + GA V + + GLP T+ + +FE S + V+ + + + G
Sbjct: 101 FDS-GANVRTKKIFVGGLPPALTSDEFRAYFETYGPVS-------DAVIMIDQTTQRPRG 152
Query: 489 DAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
FV F+ E+ D L K + + +E+ R+
Sbjct: 153 FGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRA 185
>gi|307102453|gb|EFN50727.1| hypothetical protein CHLNCDRAFT_142539 [Chlorella variabilis]
Length = 515
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 381 EAIVRFIDQEHRDMAL-KRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT--RGA 437
EA V F +EH A+ +RH +T A G+ + + E A + +G
Sbjct: 161 EAFVEFEVREHATQAVSQRHG-------TTITMAAGQFSLGMQKATKGEWDAVVAAEQGR 213
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
I+R++GLP + T V+ F + + G GV + + + A V+FE
Sbjct: 214 DGIVRLKGLPTKATTGDVMAFL-----DGYRIKLG--GVHVQPFSENRHSKIALVVFETA 266
Query: 498 EEADKALSKHK----ESIGIRYIELFRSTTAEVQQVLNK 532
EEA +AL K + E+ G RY + AE +Q + K
Sbjct: 267 EEATRALEKDRQPFGEAFGDRYCLVQLVCRAEFEQDMRK 305
>gi|172088112|ref|NP_082502.2| RNA-binding protein 12B-A [Mus musculus]
gi|124020998|sp|Q80YR9.2|R12BA_MOUSE RecName: Full=RNA-binding protein 12B-A; AltName: Full=RNA-binding
motif protein 12B-A
Length = 836
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+R+ GLP++ +++ FF+ +D +LF K+ +++G AFV F + E
Sbjct: 429 TVRVLGLPFKAREPEIVGFFKP-----LKPIDVR--LLFDKRK--RSSGRAFVDFATKPE 479
Query: 500 ADKALSKHKESIGIRYIEL 518
KAL KHK +G RYIE+
Sbjct: 480 WKKALEKHKSKMGKRYIEV 498
>gi|432101444|gb|ELK29626.1| Cysteine desulfurase, mitochondrial [Myotis davidii]
Length = 815
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 400 EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 445
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAGG-----NNN 427
G+ GE V F ++ AL RHK ++ R+I+V TK + I++ N +
Sbjct: 411 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFNYD 470
Query: 428 EAQAFL-----TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ + L +V + +P+ T V+ F E + E V +
Sbjct: 471 QREMMLNPEGDVSSTKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 523
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 524 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 570
>gi|358385024|gb|EHK22621.1| hypothetical protein TRIVIDRAFT_29142 [Trichoderma virens Gv29-8]
Length = 398
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II++R +P+ T +VI F NS + D +EGV + T DA+V F E+
Sbjct: 47 IIKLRNIPFSSTRAEVIAFL---GRNSKVLNDTDEGVHIIMDKVTSKTMDAYVEFVSLED 103
Query: 500 ADKALSKHKESIGI-RYIEL 518
A +A+ +H+ ++ RY L
Sbjct: 104 AMRAVDRHRANVAAGRYSRL 123
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T + V +F + + V+ G TG FV F E +
Sbjct: 283 VKLRGAPFNVTEQNVREFL---------LPLKPMAIRIVRNAHGNKTGYVFVDFNSEGDV 333
Query: 501 DKALSKHKESIGIRYIELFR 520
+KAL ++K+ +G RYIE+FR
Sbjct: 334 EKALKRNKDYMGGRYIEVFR 353
>gi|328715828|ref|XP_001946054.2| PREDICTED: hypothetical protein LOC100165002 [Acyrthosiphon pisum]
Length = 1148
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
VIIR++ LP+ A + +F+ + E GV V G GD F+ F +E
Sbjct: 3 VIIRLQNLPWAANAADIRQYFQG-------LSIPEGGVHIV----GGEKGDVFISFSTDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSH 558
+A +A+ I I L S+ E+Q+V++ + N+ N Q P++
Sbjct: 52 DARQAMLSDGGCIKDVQIRLLLSSRNEMQKVIDAARQQTLYNAYMQQNLMQQPQLPIVGT 111
Query: 559 LAQVPVPYLPQ 569
L + LPQ
Sbjct: 112 LPPLTAKVLPQ 122
>gi|340382973|ref|XP_003389992.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 660
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
IRMRGLPY+ + K V FF ++ + +K + +G AFV + +
Sbjct: 273 IRMRGLPYDASEKHVHKFFSPIQLSN---------IRLLKDDRERCSGLAFVDVMSKTDL 323
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+A+ ++K +G RYIEL T ++ + V K+
Sbjct: 324 KEAMKRNKGRMGRRYIELVVDTGSKEKTVKEKS 356
>gi|327269511|ref|XP_003219537.1| PREDICTED: RNA-binding protein 12B-like [Anolis carolinensis]
Length = 730
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + F N+ DG GV G G+AFV+FE +E
Sbjct: 3 VVIRLQGLPVVAGPADIRHLFSG-----LNIPDG--GVYIT----GGEKGEAFVIFETDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S + I I F S+ E+Q V+
Sbjct: 52 DARQAMSYSERYIKNSRIGCFLSSKTEMQNVI 83
>gi|327269587|ref|XP_003219575.1| PREDICTED: RNA-binding protein 12B-like [Anolis carolinensis]
Length = 730
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + F N+ DG GV G G+AFV+FE +E
Sbjct: 3 VVIRLQGLPVVAGPADIRHLFSG-----LNIPDG--GVYIT----GGEKGEAFVIFETDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+S + I I F S+ E+Q V+
Sbjct: 52 DARQAMSYSERYIKNSRIGCFLSSKTEMQNVI 83
>gi|354491414|ref|XP_003507850.1| PREDICTED: RNA-binding protein 12B-A-like [Cricetulus griseus]
Length = 850
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 24/115 (20%)
Query: 423 GGNNNEAQAFLTRGAQVIIR---------------MRGLPYECTAKQVIDFFEAGTENSC 467
G + N+ F T G + IR +RGLPY V FF C
Sbjct: 133 GSSINQDAGFHTNGTGLDIRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSG----LC 188
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
+GV+F+K DG+ GDA V F +A L H+ +G R+IE+ + +
Sbjct: 189 V-----DGVIFLKHHDGRNNGDAVVKFASCIDASGGLKCHRSFMGSRFIEVMQGS 238
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 445 GLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKAL 504
GLP+ ++ FF+ T + DG GV + G G+AF++F +E+A +A+
Sbjct: 19 GLPFIAGPGEIPHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDEDARRAI 67
Query: 505 SKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
S+ I +ELF S+ AE+Q KT+E+ +
Sbjct: 68 SRSGGFIKDSSVELFLSSKAEMQ----KTIEMKR 97
>gi|71026370|ref|XP_762861.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349813|gb|EAN30578.1| hypothetical protein TP03_0737 [Theileria parva]
Length = 968
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 24/145 (16%)
Query: 391 HRDMALKRHKHHIDKRYIE-VTKANGEDFINVAGGNNNEAQAFLTRGAQV---------- 439
++++A K+ ++ +E VTK ED N+A +++R ++
Sbjct: 117 NQNIAKKKMAKRTMRKMVEAVTKETSEDHRNLAIQKFIGDLQYVSRRKKLPTPPGIYSPS 176
Query: 440 ---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++G+P++ T K V D+ + + +++ V+F+K +G TGDA+V
Sbjct: 177 YDALLYLKGIPFKATEKDVFDWLK-----NYDIV----SVIFIKNENGFFTGDAYVRCVN 227
Query: 497 EEEADK-ALSKHKESIGIRYIELFR 520
+ DK A + IG RYI++FR
Sbjct: 228 IQVRDKVAKEMENKRIGARYIQVFR 252
>gi|432117035|gb|ELK37602.1| Heterogeneous nuclear ribonucleoprotein H [Myotis davidii]
Length = 188
Score = 42.4 bits (98), Expect = 0.71, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
PDG+ TG+A V F E+A A+SK K ++ RY+EL ST
Sbjct: 72 PDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELLNSTAG 114
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
+ V+ G TG FV F EEE KAL ++E +G RYIE+FR
Sbjct: 296 IRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGGRYIEVFR 340
>gi|388510586|gb|AFK43359.1| unknown [Lotus japonicus]
Length = 305
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 445 GLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKAL 504
L YE T+K + +FF++G S V+ E V+F + P K+TG FV F+ ++EA+ AL
Sbjct: 202 NLSYEATSKDLREFFDSG---SSQVVSAE--VVFHEDPR-KSTGYGFVSFKSKKEANAAL 255
Query: 505 SKHKE 509
S+ +E
Sbjct: 256 SEFQE 260
>gi|198475573|ref|XP_002132955.1| GA26108 [Drosophila pseudoobscura pseudoobscura]
gi|198138883|gb|EDY70357.1| GA26108 [Drosophila pseudoobscura pseudoobscura]
Length = 17011
Score = 42.0 bits (97), Expect = 0.90, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 89/230 (38%), Gaps = 52/230 (22%)
Query: 146 PTSPAISPVGKTLLSPGM--LPHSSQPLYPQHNTQI----NPGLSHLDP---LVNVHLTQ 196
P+ P SP PG+ +P QP+YP I +P + H P +VN+
Sbjct: 12918 PSVPHPSP------QPGVVNIPSVPQPVYPSPQPPIYDVNHPTIPHPQPAPGIVNIPSVP 12971
Query: 197 ALAQAQYAKSQQDNLMLMNQ-IAAQQMAALNKPHNMALNGHTPTLIPAPSPNAL-MP--- 251
+ N+ + Q A Q +N P P PAP P +P
Sbjct: 12972 QPQPTPVPQPGVVNIPSVPQPTPAPQPGVINIPS-------VPQPTPAPQPGVFNIPSVP 13024
Query: 252 ---PPLNSKSTTIPTNLPALPAVPTSG----GYFPQFQLPINMNTAHLLQPMNTPFFFNM 304
PP + + T L ++P P G PQ + PI+ H P TP +
Sbjct: 13025 QPIPPSHQPPVYLSTPLNSVPPAPQPGIINIPSVPQPRPPIH--GVHYPTP-QTP----I 13077
Query: 305 PRMPV----TPQVL-PKFPVHQLNQTPTVYTI--PTPGNPVALCPLVQNI 347
P PV P V+ P +P Q P VY + PTP +PV P++ NI
Sbjct: 13078 PERPVGVVNIPSVVQPVYPTPQ----PPVYDVNYPTPHSPVPQRPVIVNI 13123
>gi|428172624|gb|EKX41532.1| hypothetical protein GUITHDRAFT_112506 [Guillardia theta CCMP2712]
Length = 514
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
TGDA V F E++A +A+S ++ IG RY+EL RS+
Sbjct: 20 TGDALVEFGSEDDASRAMSYDRQMIGDRYVELRRSS 55
>gi|403222739|dbj|BAM40870.1| uncharacterized protein TOT_030000131 [Theileria orientalis strain
Shintoku]
Length = 916
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ ++G+PY T K V ++ + + V++ V+F+K +G TGDA+V E E
Sbjct: 178 LLYLKGIPYTATEKMVFEWLK-----NYEVVN----VVFIKNENGFFTGDAYVRCENIEV 228
Query: 500 ADKALSKHKES-IGIRYIELFR 520
DKA + IG RYI++FR
Sbjct: 229 RDKASREMANRMIGGRYIQVFR 250
>gi|350592780|ref|XP_003483535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Sus
scrofa]
Length = 161
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 45 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 85
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
+ V+ G TG FV F EEE KAL ++E +G RYIE+FR
Sbjct: 279 AIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFR 324
>gi|297825067|ref|XP_002880416.1| hypothetical protein ARALYDRAFT_481072 [Arabidopsis lyrata subsp.
lyrata]
gi|297326255|gb|EFH56675.1| hypothetical protein ARALYDRAFT_481072 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I + GLP+E T + ++D FE E EE + + K GKA G FV+F+ + A
Sbjct: 100 IFVYGLPWETTRETLVDVFEGYGEI-------EECTVVIDKATGKAKGFGFVMFKTRKGA 152
Query: 501 DKALSKHKESI 511
+AL + K+ I
Sbjct: 153 KEALKEPKKRI 163
>gi|448825374|ref|YP_007418305.1| hypothetical protein LBA_00411 [Megavirus lba]
gi|444236559|gb|AGD92329.1| hypothetical protein LBA_00411 [Megavirus lba]
Length = 332
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 116/302 (38%), Gaps = 65/302 (21%)
Query: 21 LLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKVLVEHILEF-----LGEFASN 75
+L + ++++L+Y I +S S+ + +Q F+K + H L + +F S+
Sbjct: 16 ILDTASDKLVILMYFIKNS--------SECRRALQSFEKAALNHTLTIFCIVDVDKFDSD 67
Query: 76 IVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGED 135
+Y + N + PS E++ M + S Y + +R IE F + E
Sbjct: 68 SIY-----INNVKTTPSFESYY-MGNSFSQYSTS------------NEREIETFIVTCEQ 109
Query: 136 MNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQINPGL--------SHLD 187
++ N + ++ ++ GM + +Q +Y Q N INP + +
Sbjct: 110 QVMMQNNIRNGNGQNMNQGMNQGMNQGMNQNMNQ-MYGQQNQSINPMFLRQQILNNAQSN 168
Query: 188 PLVNVHLTQA--LAQAQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHT-------- 237
P++ HL + Q Q Q N+M Q L M NG
Sbjct: 169 PMLYNHLMNNPNILQQQVNVLMQQNMMQQRNNIPMQNNGLQMSSQMMPNGLMNPMNNMSN 228
Query: 238 ----PTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLL 293
PT IP PN++ S IP N LP + +F FQ+ M + ++L
Sbjct: 229 MPIIPTNIPTNMPNSV--------SQEIPNNDDTLPTLQQMKKWFHIFQM---MQSCNML 277
Query: 294 QP 295
P
Sbjct: 278 NP 279
>gi|290985740|ref|XP_002675583.1| predicted protein [Naegleria gruberi]
gi|284089180|gb|EFC42839.1| predicted protein [Naegleria gruberi]
Length = 756
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 445 GLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKAL 504
GL + +++IDFF N + + +KK DG++ G FV F E A K L
Sbjct: 324 GLKETTSEQELIDFFSRSPNNYGPI----SHCVIMKKWDGRSRGFGFVTFSDESIAKKVL 379
Query: 505 SKHKES---IGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
S HKE IG I+ A+ Q ++++P + S SS++ +
Sbjct: 380 SYHKEHPFMIGNHRIDC---QVAQSQGCKIDSVDIPTHASTISSSSRM 424
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
+ V+ G TG FV F EEE KAL ++E +G RYIE+FR
Sbjct: 282 AIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFR 327
>gi|425701303|gb|AFX92465.1| hypothetical protein CE11_00438 [Megavirus courdo11]
Length = 332
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 116/302 (38%), Gaps = 65/302 (21%)
Query: 21 LLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKVLVEHILEF-----LGEFASN 75
+L + ++++L+Y I +S S+ + +Q F+K + H L + +F S+
Sbjct: 16 ILDTASDKLVILMYFIKNS--------SECRRALQSFEKAALNHTLTIFCIVDVDKFDSD 67
Query: 76 IVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGED 135
+Y + N + PS E++ M + S Y + +R IE F + E
Sbjct: 68 SIY-----INNVKTTPSFESYY-MGNSFSQYSTS------------NEREIETFIVTCEQ 109
Query: 136 MNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQINPGL--------SHLD 187
++ N + ++ ++ GM + +Q +Y Q N INP + +
Sbjct: 110 QVMMQNNIRNGNGQNMNQGMNQGMNQGMNQNMNQ-MYGQQNQSINPMFLRQQILNNAQSN 168
Query: 188 PLVNVHLTQA--LAQAQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHT-------- 237
P++ HL + Q Q Q N+M Q L M NG
Sbjct: 169 PMLYNHLINNPNILQQQVNVLMQQNMMQQRNNIPMQNNGLQMSSQMMPNGLMNPMNNMSN 228
Query: 238 ----PTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLL 293
PT IP PN++ S IP N LP + +F FQ+ M + ++L
Sbjct: 229 MPIIPTNIPTNMPNSV--------SQEIPNNDDTLPTLQQMKKWFHIFQM---MQSCNML 277
Query: 294 QP 295
P
Sbjct: 278 NP 279
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFR 520
+ V+ G TG FV F EEE KAL ++E +G RYIE+FR
Sbjct: 282 AIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFR 327
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG+P+ Q+ +F + + K G TG +V E+
Sbjct: 306 VKLRGVPFNVKELQIREFMTPLKPAAIRIG---------KNDSGNRTGYVYVDLHSAEQV 356
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLT 543
+ AL K+K+ IG RYIE+FR +E + + E+ +N + T
Sbjct: 357 EAALKKNKDYIGGRYIEVFRVDNSEKAKRDKRDREVDRNFTRT 399
>gi|49903191|gb|AAH76429.1| Rbm19 protein, partial [Danio rerio]
Length = 275
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ +++RG P+ +QV +F + + F K DG+ +G +V E
Sbjct: 182 EFTVKLRGAPFNVKEQQVKEFM---------MPLKPVAIRFAKNSDGRNSGYVYVDLRSE 232
Query: 498 EEADKALSKHKESIGIRYIELFRS 521
E ++AL K+ +G RYIE+FR+
Sbjct: 233 AEVERALRLDKDYMGGRYIEVFRA 256
>gi|198433338|ref|XP_002125228.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 249
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 23/94 (24%)
Query: 402 HIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEA 461
H+DK+ +TK INVA + I+++ GLP E + ++I F
Sbjct: 166 HVDKKDSSITK------INVASND-----------LHNIVKISGLPEEFSKNKLISFLGI 208
Query: 462 GTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
N G++G+ ++ DG +TG A+VL E
Sbjct: 209 WPSN------GQDGIRVIRNLDGSSTGYAYVLLE 236
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN----NNEAQAFLT 434
G+ R +D+E AL+ K H+ ++K + AG + E + +
Sbjct: 4 KGDGKKRKLDEEANGAALQLSKDHLHSLLEPLSKEQLISLLVDAGSSYPAIAEEIKDVAS 63
Query: 435 RG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
+ A + +RGL +E +++ + D FE E EEG + + K GK+ G FV
Sbjct: 64 KDPAHRKLFVRGLAWETSSQTLCDAFEQYGEI-------EEGAVIMDKASGKSRGFGFVT 116
Query: 494 FEKEEEADKALSKHKESIGIR 514
F+ + A KAL + ++I R
Sbjct: 117 FKHMDSAQKALKEPSKTIDGR 137
>gi|408391573|gb|EKJ70947.1| hypothetical protein FPSE_08915 [Fusarium pseudograminearum CS3096]
Length = 782
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R++ +P+ +++ F NS + DGEE + + T DAFV F E+
Sbjct: 430 VVRLKNIPFSTKRSEIVAFI---GRNSRMLSDGEEPIHIIMDRATSKTMDAFVEFMTMED 486
Query: 500 ADKALSKHKE--------SIGIRYIELFRSTTAEVQQVL 530
A + KH + +G R +E+ S+ A + Q L
Sbjct: 487 AMRCAEKHHQYTQTGRISRLGERPVEVELSSQAALMQEL 525
>gi|46130628|ref|XP_389094.1| hypothetical protein FG08918.1 [Gibberella zeae PH-1]
Length = 782
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R++ +P+ +++ F NS + DGEE + + T DAFV F E+
Sbjct: 430 VVRLKNIPFSTKRSEIVAFI---GRNSRMLSDGEEPIHIIMDRATSKTMDAFVEFMTMED 486
Query: 500 ADKALSKHKE--------SIGIRYIELFRSTTAEVQQVL 530
A + KH + +G R +E+ S+ A + Q L
Sbjct: 487 AMRCAEKHHQYTQTGRISRLGERPVEVELSSQAALMQEL 525
>gi|74147744|dbj|BAE38739.1| unnamed protein product [Mus musculus]
Length = 64
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>gi|405971235|gb|EKC36082.1| RNA-binding protein 12 [Crassostrea gigas]
Length = 487
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 34/228 (14%)
Query: 380 GEAIVRFIDQEHRDMALKRH-KHHIDKRYIEVTKANGEDFINVAGGNN------NEAQAF 432
G ++F +Q L H K D IE+ K + +DF N + E
Sbjct: 3 GVIFIKFQNQRSFREGLNFHGKIFTDGSRIEILKCSNKDFDNCDPASKLQQTPEQEDSKR 62
Query: 433 LT-----RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
L R +Q II+M+GL V++FF+ C + EG+ + T
Sbjct: 63 LKVGVALRTSQYIIQMKGLGINGKKVDVVEFFKG-----CEIAKNGEGIHIEYDIKNRCT 117
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNN 547
G AF+ + AL+ + R I + + +V+Q+ + E+ N
Sbjct: 118 GTAFIEMSTLSDFQTALTFDGKMFNSRLIRVSAGSLRDVEQLHERMREMMANK------- 170
Query: 548 GLSAQQPMLSHLAQVPVPYLPQHIITSG--------TRKDCIRLRGLP 587
+++P L P P I+ T C+ L+GLP
Sbjct: 171 --QSEEPDKRPLLPNPTNIEPNRILAPDGEYRNRITTNLHCVHLQGLP 216
>gi|371943719|gb|AEX61547.1| hypothetical protein c7_L484 [Megavirus courdo7]
Length = 332
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 65/302 (21%)
Query: 21 LLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKVLVEHILEF-----LGEFASN 75
+L + ++++L+Y I +S S+ + +Q F+K + H L + +F S+
Sbjct: 16 ILDTASDKLVILMYFIKNS--------SECRRALQSFEKAALNHTLTIFCIVDVDKFDSD 67
Query: 76 IVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGED 135
+Y + N + PS E++ M + S Y + +R IE F + E
Sbjct: 68 SIY-----INNVKTTPSFESYY-MGNSFSQYSTS------------NEREIETFIVTCEQ 109
Query: 136 MNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQINPGL--------SHLD 187
++ N + ++ ++ GM +Q +Y Q N INP + +
Sbjct: 110 QVMMQNNIRNGNGQNMNQGMNQGMNQGMNQKMNQ-MYGQQNQSINPMFLRQQILNNAQSN 168
Query: 188 PLVNVHLTQA--LAQAQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHT-------- 237
P++ HL + Q Q Q N+M Q L M NG
Sbjct: 169 PMLYNHLMNNPNILQQQVNVLMQQNMMQQRNNIPMQNNGLQMSSQMMPNGLMNPMNNMSN 228
Query: 238 ----PTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLL 293
PT IP PN++ S IP N LP + +F FQ+ M + ++L
Sbjct: 229 MPIIPTNIPTNMPNSV--------SQEIPNNDDTLPTLQQMKKWFHIFQM---MQSCNML 277
Query: 294 QP 295
P
Sbjct: 278 NP 279
>gi|443715937|gb|ELU07669.1| hypothetical protein CAPTEDRAFT_49477, partial [Capitella teleta]
Length = 97
Score = 41.2 bits (95), Expect = 1.4, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++ GLPY V DFFE G E + + G+ + + TG +V F +
Sbjct: 15 VKLDGLPYLANNVAVKDFFE-GLEIA------QRGIHLMHNDRHQCTGIGYVEFVTSADC 67
Query: 501 DKALSKHKESIGIRYI 516
DKA++K+KE +G R+I
Sbjct: 68 DKAVAKNKEYMGKRFI 83
>gi|340519775|gb|EGR50013.1| predicted protein [Trichoderma reesei QM6a]
Length = 398
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II+++ +P+ T +VI F NS + D +EGV + T DA+V F E+
Sbjct: 47 IIKLKNIPFSTTRAEVIAFL---GRNSKVLNDTDEGVHIIMDKVTSKTMDAYVEFVSLED 103
Query: 500 ADKALSKHKESI--------GIRYIELFRSTTAEVQQVLNKTME-----------LPKNN 540
A +A+ +H+ ++ G R IE+ ++ A + + L LP N
Sbjct: 104 AMRAVERHRSNVVAGRFSRLGDRPIEVEVTSQASLMKDLFPIARGVFWNGVTPEILPFNP 163
Query: 541 SLTSSN-NGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEAL 591
+ N G +++ M+ + V VP+ S +DC + PYE L
Sbjct: 164 TQPWDNFKGFVSEEEMIMLVKHVEVPH------RSPFSRDCPQ---RPYECL 206
>gi|358393451|gb|EHK42852.1| hypothetical protein TRIATDRAFT_78790 [Trichoderma atroviride IMI
206040]
Length = 398
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II+++ +P+ T +VI F NS + D +EGV + T DA+V F E+
Sbjct: 47 IIKLKNIPFATTRAEVIAFL---GRNSKILNDSDEGVHIIMDKVTSKTMDAYVEFVSLED 103
Query: 500 ADKALSKHKESIGI-RYIELFRST 522
A +A+ +H+ ++ RY L T
Sbjct: 104 AMRAVERHRLNVAAGRYARLGERT 127
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
+ +I MRG+P+ C+ K++ +FF V+ + VK +GK G A V +
Sbjct: 273 GEFVIEMRGIPFYCSEKEISEFFAP-----IEVV----AIHIVKNKNGKQLGFARVELKN 323
Query: 497 EEEADKALSKHKESIGIRYIEL 518
E + +A+++HK+ + R IE+
Sbjct: 324 ENDLKEAMTRHKDYMRGRCIEI 345
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
K GK+TG FV + E E KAL + KE IG +Y+E+ R A + V KT + P
Sbjct: 3 KNTQGKSTGFIFVDLKSEAEVQKALKRKKEYIGGQYVEVSRCENAPKETVTAKTDDQP 60
>gi|70945353|ref|XP_742505.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521527|emb|CAH76146.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 139
Score = 40.8 bits (94), Expect = 2.3, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
I++RGLP++ + ++ +FF +S + + + + +K K TG A+V F+ EEA
Sbjct: 36 IKLRGLPFDVSEDEIKNFF-----SSFKLSNQKNPIHIIKGIKDKPTGHAYVYFDDSEEA 90
Query: 501 DKALSK-HKESIGIRYIELF 519
A +++ + RYIE++
Sbjct: 91 RNACQHLNRKFLRNRYIEIY 110
>gi|237841905|ref|XP_002370250.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211967914|gb|EEB03110.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|221482720|gb|EEE21058.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
gi|221503087|gb|EEE28793.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 199
Score = 40.8 bits (94), Expect = 2.3, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 461 AGTENSCNVMDG-------EEGVLFVKKPDGKATGDAFVLFEKEEEADKA-LSKHKESIG 512
G E+ N +G +E + ++ DG+ TG A V FE E+EA +A KH+ +
Sbjct: 103 GGAEDIANFFEGYSLAGPPDEAIQLHRRMDGRPTGWASVYFESEQEARRAKQDKHRSYLH 162
Query: 513 IRYIELF 519
RYIE+F
Sbjct: 163 GRYIEIF 169
>gi|345310949|ref|XP_003429037.1| PREDICTED: epithelial splicing regulatory protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 163
Score = 40.8 bits (94), Expect = 2.4, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E++LL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELVLLLWKVVDLANKKV 45
>gi|406855500|pdb|3TU5|B Chain B, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
Length = 297
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 19 GNLLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKVLVEHILEFLGEFASNIVY 78
GN DE + V +D Y+N + Q++E +QGF+ FLG F S + Y
Sbjct: 84 GNECSQDESGAAAIFTVQLDDYLNGRAV--QHRE-VQGFESAT------FLGYFKSGLKY 134
Query: 79 QGVHMVYN--------SQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ + S+G+P ++++ +SE SA LAA H+ + K
Sbjct: 135 KKGGVASKLRKVAEQTSEGRPKKPSYVEAESERSALLAAIRGHSGTLSLRK 185
>gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi]
Length = 335
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 14/154 (9%)
Query: 372 LSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQA 431
++ F R G V+F DQ+ LK H +D + I+ G + A
Sbjct: 45 VTGFSR--GFGFVKFSDQQSVSKVLKNGPHSLDNKKIDPKP------CTPKGIQQEKKSA 96
Query: 432 FLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAF 491
+ I + G+ T + V +FE G V V + K D + G F
Sbjct: 97 AMEHTQSHKIFIGGIAQSSTTEDVKKYFEEGFGTVNEV------VFVINKEDNRHKGFGF 150
Query: 492 VLFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
V F E+ +KA+ H IG + IE R+T E
Sbjct: 151 VTFANEQAVNKAVDMHFHEIGDKQIEAKRATPRE 184
>gi|148231978|ref|NP_001083138.1| RNA binding motif protein 12B [Xenopus laevis]
gi|37805207|gb|AAH60345.1| MGC68792 protein [Xenopus laevis]
Length = 654
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + + FF ++ DG GV G +AF++F +E
Sbjct: 3 VVIRLQGLPVTAGSNDIRHFFSG-----LHIPDG--GVHIT----GGKYAEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A +A+ I IELF S+ AE+Q L
Sbjct: 52 DARRAMRCSGGFIKKSQIELFLSSKAEMQHTL 83
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 374 AFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG--GNNNEAQA 431
A GR G V F D D L+ KHHID R ++V +A + + AG G N ++
Sbjct: 42 ATGRPRGFGFVAFSDPAVIDRVLQ-DKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRN 100
Query: 432 FLTRGAQVIIR---MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
F + GA V + + GLP T+ + +FE S + V+ + + + G
Sbjct: 101 FDS-GANVRTKKIFVGGLPPALTSDEFRAYFETYGPVS-------DAVIMIDQTTQRPRG 152
Query: 489 DAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
FV F+ E+ D L K + + +E+ R+
Sbjct: 153 FGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRA 185
>gi|302754726|ref|XP_002960787.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
gi|300171726|gb|EFJ38326.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
Length = 359
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG-GN 425
G + A G+ G + F + ALK ID R +T N + AG G+
Sbjct: 100 GAVITDKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGR---ITVCNLASVGSSAGAGS 156
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
++AQ L G GL YE + + +++ F + EEG + K K
Sbjct: 157 ADQAQRKLYIG--------GLSYETSNETLLNIF-------SQYGEIEEGAVAYDKNTNK 201
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYI 516
+ G AF+ ++ E A KA+ ++I R++
Sbjct: 202 SRGFAFITYKSVEAARKAIDDPNKTIEGRHV 232
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN-GEDFINVAGGN 425
G + A G+ G + F + ALK ID R +T N + +GG
Sbjct: 62 GAVIIDKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGR---ITVCNLASVGTSGSGGT 118
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
N++AQ L G GL YE + + +++ F E EEG + K K
Sbjct: 119 NDQAQRKLYIG--------GLSYETSNETLLNIFSKYGEI-------EEGAVAYDKNTNK 163
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYI 516
+ G AFV ++ E A A+ ++I R++
Sbjct: 164 SRGFAFVTYKTVEAARNAIDDPNKTIEGRHV 194
>gi|326517396|dbj|BAK00065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 424 GNNNEAQAFLTRGAQVI--IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N A + G Q +R+RGLP++C + FF + +++D L V K
Sbjct: 87 GGNLAGAAGVNSGIQNFPAVRLRGLPFDCEDVDISKFF-----SGLDIVD----CLLVHK 137
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKE 509
+G+ +G+AFV+F +A+ AL ++K
Sbjct: 138 -NGRFSGEAFVVFPSSMQAEFALHRNKR 164
>gi|226294952|gb|EEH50372.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1304
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
+EA + G +V + L ++ +++ + FE C G EGV +K +G +
Sbjct: 1005 DEATGPMVEGREVHVS--NLDWKVGEEELRELFEG-----CVGAGGVEGVRIPRKANGGS 1057
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
G FV+F +E A+KALS + + R + + STT
Sbjct: 1058 KGFGFVVFRDKESAEKALSLNDQPFHSRPLHVHISTT 1094
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG+P T +++ +FF + + KK GK +G FV + E +
Sbjct: 301 VKLRGVPSNITEQKIREFF---------LPLKPVAIRIGKKARGKNSGYVFVDLKSEADM 351
Query: 501 DKALSKHKESIGIRYIELFRST 522
+AL + KE +G R IE+FR +
Sbjct: 352 QRALKRKKEYLGGRCIEVFRCS 373
>gi|85001419|ref|XP_955428.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303574|emb|CAI75952.1| RNA-binding protein, putative [Theileria annulata]
Length = 959
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++ ++G+P++ T K V D+ + + +V+ V+F+K +G TGDA+V
Sbjct: 180 LLYIKGIPFKATEKDVFDWLK-----NYDVV----SVVFIKNENGFFTGDAYVRCVNIGV 230
Query: 500 ADK-ALSKHKESIGIRYIELFR 520
DK A ++IG RYI++FR
Sbjct: 231 RDKVAKEMENKTIGGRYIQVFR 252
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,938,366,841
Number of Sequences: 23463169
Number of extensions: 448490467
Number of successful extensions: 1367156
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 784
Number of HSP's that attempted gapping in prelim test: 1353064
Number of HSP's gapped (non-prelim): 10044
length of query: 612
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 463
effective length of database: 8,863,183,186
effective search space: 4103653815118
effective search space used: 4103653815118
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)