BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16116
(612 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BJZ5|FUSIL_DROME RNA-binding protein fusilli OS=Drosophila melanogaster GN=fus PE=2
SV=1
Length = 967
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 36/257 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PKN
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKN----YE 481
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQ-------------------------------HIITS 574
+ G +Q P+++ L + +P LPQ H+ITS
Sbjct: 482 SGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITS 541
Query: 575 GTRKDCIRLRGLPYEAL 591
GT K+CIRLRGLPYEA+
Sbjct: 542 GTTKNCIRLRGLPYEAM 558
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
D AL +HK IG RYIE++R++ + L + + Q LS
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRASGEDF---------------LAIAGGASNEAQAFLSKG 377
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
AQV IR+RGLPY+A ++D F G
Sbjct: 378 AQV-----------------IIRMRGLPYDATAKQVLDFFTTG 403
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 68/234 (29%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----- 421
GV GR G+A V F ++ AL RH+ I +RYIE+ ++ + V
Sbjct: 416 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSM 475
Query: 422 ------AGGNNNE----------------------------------------------A 429
+GG +++
Sbjct: 476 DPKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPT 535
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + ++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIY-----QGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEADKALSK---HKESIG--IRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A + H G RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 299 PFFFNMPRM--PVTPQVLPKFPVHQLNQTPT-----------------VYTIPTPGNPVA 339
P +P M P+ PQV H L +P + T T N +
Sbjct: 490 PLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQHLITSGTTKNCIR 549
Query: 340 LCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF-IDQEHRDMALKR 398
L L + +L+ + + + + GV + ++A G+ +GEA ++ +++ R A +R
Sbjct: 550 LRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRR 609
Query: 399 HKHHI----DKRYIEVTKANGEDFINVAGGN 425
H H++ RYIEV + +G+D V G
Sbjct: 610 HNHYMMFGKKYRYIEVFQCSGDDMNMVLNGG 640
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + + G+ +GEA I+ + +A + RH ++ RYIEV++ SGE
Sbjct: 303 NVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALK-RHKHHI----GTRYIEVYRASGE 357
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G +S + ++ LP+ +
Sbjct: 358 DFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDA 391
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+GV V G+ +G+AF+ +E A A RH ++ QRYIE+F+ + ++
Sbjct: 415 EGVLFVKKPDGRATGDAFVLFANETDAPKALG-RHRESI----GQRYIELFRSTTAEVQQ 469
Query: 139 VLNGVLPP 146
VLN + P
Sbjct: 470 VLNRSMDP 477
>sp|A1L1G1|ESRP1_DANRE Epithelial splicing regulatory protein 1 OS=Danio rerio GN=esrp1
PE=2 SV=1
Length = 714
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 164/238 (68%), Gaps = 19/238 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFESEEHRDLALQRHKHHMGGRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE +FL+R Q+I+RMRGLP+ TA+QV+ FF +C V DG EG+LFV+ PDG+
Sbjct: 313 SNEVASFLSRENQIIVRMRGLPFNATAEQVLQFFSP----ACPVTDGSEGILFVRFPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELF+ST AEVQQVLNK P
Sbjct: 369 PTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFKSTAAEVQQVLNKYSSAPLIP----- 423
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+LS +A P ++PQ G R DC+RLRGLPY+A + DI F+G+
Sbjct: 424 ----VAPSPILSVVA--PPTFVPQTAAVPGVR-DCVRLRGLPYDA--SIQDILVFLGE 472
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 24/131 (18%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL FLGE+ ++I GVHMV N QG+PSGEAFIQM S A+LAAQ H R+M
Sbjct: 463 IQDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-------------------VLPPTSPAISPVGKTLLSPG 162
K+RY+EVF CS +++N+VL G P +P + P G L +
Sbjct: 519 KERYVEVFACSAQEVNIVLMGGTLNRSGLSPPPCLSPPSYTFPHGAPVL-PAGAVLPAGA 577
Query: 163 MLPHSSQPLYP 173
+LP S +YP
Sbjct: 578 VLPVESAGIYP 588
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 28/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED------------------ 417
GR G+A V F +EH ALK+HK + KRYIE+ K+ +
Sbjct: 367 GRPTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFKSTAAEVQQVLNKYSSAPLIPVAP 426
Query: 418 --FINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSCNVMDGEE 474
++V Q G + +R+RGLPY+ + + ++ F E G + +
Sbjct: 427 SPILSVVAPPTFVPQTAAVPGVRDCVRLRGLPYDASIQDILVFLGEYGADIKTH------ 480
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +G+AF+ E A A + HK S+ RY+E+F + EV VL
Sbjct: 481 GVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSMKERYVEVFACSAQEVNIVL 537
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+IR RGLP++ + + + FF N+ G G G+ G+A V FE EE
Sbjct: 225 TVIRARGLPWQSSDQDIARFFRG-----LNIAKG--GAALCLNAQGRRNGEALVRFESEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 278 HRDLALQRHKHHMGGRYIEVYKATGEDFLKIAGGT 312
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ +SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFESEEHRDLALQ-RHKHHM----GGRYIEVYKATGE 303
Query: 135 DMNLVLNGV 143
D + G
Sbjct: 304 DFLKIAGGT 312
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID------SYVNKVLITSQYKE 52
P Y + F T+G G+ LGSDE+EI+ L++ ++D VN++L+ + E
Sbjct: 5 PDYLVLLFTTTSGASGDKLGSDEKEIVQLVWQVVDLATKKAGQVNELLVKPDHIE 59
>sp|Q7ZVR8|ESRP2_DANRE Epithelial splicing regulatory protein 2 OS=Danio rerio GN=esrp2
PE=2 SV=2
Length = 736
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 160/239 (66%), Gaps = 18/239 (7%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRDMAL RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ Q+IIRMRGLP+ T + V+ F G E C V DG EG+LFVK PDG+
Sbjct: 312 SNEVAQFLSKENQMIIRMRGLPFTATPQDVLGFL--GPE--CPVTDGTEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P L S+
Sbjct: 368 PTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTP----LIST 423
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQQ 603
+ LA P IT+G +DCIRLRGLPY A + DI F+G+
Sbjct: 424 LPPPPPPMVSVPVLATPP-------FITTGNTRDCIRLRGLPYTA--AIEDILEFMGEH 473
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 29/150 (19%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 463 IEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----------------VLPPT------SPAISPVGKTL 158
K RY+EVFQCS E+M+ VL G + PPT +PA+ P L
Sbjct: 519 KDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAMLPTEAAL 578
Query: 159 LSPGMLPHSSQPLYPQHNTQINPGLSHLDP 188
P +L P P H+ P ++ P
Sbjct: 579 YQPPLLATPRTPQAPTHSPA--PAFAYYSP 606
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN-------- 427
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 366 GRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLP 425
Query: 428 ------------EAQAFLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEE 474
F+T G + IR+RGLPY + +++F E++ ++
Sbjct: 426 PPPPPMVSVPVLATPPFITTGNTRDCIRLRGLPYTAAIEDILEFM---GEHTIDIK--PH 480
Query: 475 GVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ + + A K HK+ + RY+E+F+ +T E+ VL
Sbjct: 481 GVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVL 537
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 222 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFIN 274
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPML 556
E D AL +HK +G RYIE++++T E ++ T +N + LS + M+
Sbjct: 275 SEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT-----SNEVA---QFLSKENQMI 326
Query: 557 SHLAQVPVPYLPQHII 572
+ +P PQ ++
Sbjct: 327 IRMRGLPFTATPQDVL 342
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+E+ILL++ I+D + NKV
Sbjct: 10 VFFGATAGANGGKLGSDERELILLVWQIVDLHENKV 45
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 156/393 (39%), Gaps = 93/393 (23%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 339 QDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALK-KHKQ--ILGK 395
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPV---------GKTLLSPGM--------- 163
RYIE+F+ + ++ VLN + ++P IS + L +P
Sbjct: 396 --RYIELFRSTAAEVQQVLNRYM--STPLISTLPPPPPPMVSVPVLATPPFITTGNTRDC 451
Query: 164 -----LPHSSQ-----PLYPQHNTQINPGLSHL----------DPLVNVHLTQA---LAQ 200
LP+++ +H I P H+ D + + +AQ
Sbjct: 452 IRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQ 511
Query: 201 AQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTP-------------TLIPA---- 243
+ K +D + + Q + ++M+ + + +G +P PA
Sbjct: 512 KCHKKMMKDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAM 571
Query: 244 -PSPNALMPPPL--NSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPF 300
P+ AL PPL ++ PT+ PA P Y P QL +NMN ++ T +
Sbjct: 572 LPTEAALYQPPLLATPRTPQAPTHSPA----PAFAYYSP--QLYMNMNMSY------TTY 619
Query: 301 FFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPT-------PGNPVALCPLVQNIWLSLLL 353
+ P PV+P + F + V PT PG V + L N + +L
Sbjct: 620 Y---PSPPVSPSTVSYFAAPPGSVAAAVAAQPTPAILPPQPGALVRMQGLPYNAGVKDIL 676
Query: 354 NTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF 386
+ GY+ L V + + G+R+GEA+V F
Sbjct: 677 SFFQGYQ--LQADSVLVLYNWSGQRSGEALVTF 707
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ ++SEH A RH +M RYIEV++ +G
Sbjct: 248 NIAKGGVALCLNAQGRRNGEALVRFINSEHRDM--ALDRHKHHM----GSRYIEVYKATG 301
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 302 EEFLKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATP 338
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++RM+GLPY K ++ FF+ + + VL + G+ +G+A V F E+
Sbjct: 659 ALVRMQGLPYNAGVKDILSFFQGYQLQA-------DSVLVLYNWSGQRSGEALVTFPSEK 711
Query: 499 EADKALSK 506
A +A+++
Sbjct: 712 AARRAVAE 719
>sp|B2RYD2|ESRP1_RAT Epithelial splicing regulatory protein 1 OS=Rattus norvegicus
GN=Esrp1 PE=2 SV=2
Length = 677
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 157/239 (65%), Gaps = 26/239 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP-------- 420
Query: 546 NNGLSAQQPMLSHLAQVP-VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
L L P +P LPQ + +DC+RLRGLPY A + DI F+G+
Sbjct: 421 ----------LIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAA--TIEDILDFLGE 467
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCS E+MN VL G
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMG 534
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNE--------------AQAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + +R+RGLPY T + ++DF E S +
Sbjct: 415 RFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFL---GEFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 67/323 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNG-----VLP-PTSPAISPVGKTLLSPGM---------LPHSSQ-----PLYPQHNTQ 178
VLN ++P PT+P I + + + P LP+++ + +T
Sbjct: 412 VLNRFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTD 471
Query: 179 INPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQM--- 222
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 472 IRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMNFV 531
Query: 223 ---AALNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFP 279
LN+ +P P+P A++P + P+ L A+ S Y+P
Sbjct: 532 LMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIP---TEAAIYQPSLLLNPRALQPSTAYYP 588
Query: 280 Q-FQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGNP 337
QL +N + P P +P L FP L+ P P PG
Sbjct: 589 AGTQLFMNYTAYY-------------PSPPGSPNSLGYFPTAANLSSVP-----PQPGTV 630
Query: 338 VALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 631 VRMQGLAYNTGVKEILNFFQGYQ 653
>sp|Q3US41|ESRP1_MOUSE Epithelial splicing regulatory protein 1 OS=Mus musculus GN=Esrp1
PE=2 SV=2
Length = 680
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 368 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFS----------- 416
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 417 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 466
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 457 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 512
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 573 -QPSLLLNP 580
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 354 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 413
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF E S +
Sbjct: 414 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL---GEFSTD 470
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 471 IR--THGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 528
Query: 528 QVL 530
VL
Sbjct: 529 FVL 531
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 224 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 276
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 277 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 333
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 334 --FTATAEEVVAFFGQHCPITGGKE 356
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 336
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 67/325 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR ++ ++ GK RYIE+F+ + ++
Sbjct: 356 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKELL-GK--RYIELFRSTAAEVQQ 410
Query: 139 VLN----------------GVLPPTSPAISPVGKTLLSPGMLPHSSQ-----PLYPQHNT 177
VLN VLP + V + G LP+++ + +T
Sbjct: 411 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRG-LPYAATIEDILDFLGEFST 469
Query: 178 QINPGLSHL----------DPLVNVHLTQAL---AQAQYAKSQQDNLMLMNQIAAQQMAA 224
I H+ D + + T AQ + K+ +D + + Q +A++M
Sbjct: 470 DIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEM-- 527
Query: 225 LNKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQF 281
N L G T + N L PPP + P+ PA AV PT Y P
Sbjct: 528 -----NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIYQPSL 576
Query: 282 QL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPG 335
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 577 LLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSSVP-----PQPG 631
Query: 336 NPVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 632 TVVRMQGLAYNTGVKEILNFFQGYQ 656
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
>sp|Q6NXG1|ESRP1_HUMAN Epithelial splicing regulatory protein 1 OS=Homo sapiens GN=ESRP1
PE=1 SV=2
Length = 681
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF----GQHCPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFS----------- 417
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 418 ----SAPLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAA--TIEDILDFLGE 467
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVILNP 581
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFF-EAGTENSC 467
++ Q F+ + IR+RGLPY T + ++DF E T+
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRT 474
Query: 468 NVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEV 526
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 475 H------GVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM 528
Query: 527 QQVL 530
VL
Sbjct: 529 NFVL 532
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 TVVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 277
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGLSAQQ 553
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 278 HRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLP--- 334
Query: 554 PMLSHLAQVPVPYLPQHIITSGTRK 578
+ A+ V + QH +G ++
Sbjct: 335 --FTATAEEVVAFFGQHCPITGGKE 357
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GTRYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 65/324 (20%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E Y LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEE--YAQNALRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNGV---------------------LPPTS----------PAISPVGKTLLSPGMLPHS 167
VLN +PPT+ P + + L G
Sbjct: 412 VLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATD 471
Query: 168 --SQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAAL 225
+ ++ N Q P + + AQ + K+ +D + + Q +A++M
Sbjct: 472 IRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEM--- 528
Query: 226 NKPHNMALNGHTPTLIPAPSPNALMPPPLNSKSTTIPT-NLPALPAV-PTSGG-YFPQFQ 282
N L G T + N L PPP + P+ PA AV PT Y P
Sbjct: 529 ----NFVLMGGTL------NRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVI 578
Query: 283 L-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFPVH-QLNQTPTVYTIPTPGN 336
L P + + P T F N P P +P L FP L+ P P PG
Sbjct: 579 LNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVP-----PQPGT 633
Query: 337 PVALCPLVQNIWLSLLLNTIPGYE 360
V + L N + +LN GY+
Sbjct: 634 VVRMQGLAYNTGVKEILNFFQGYQ 657
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
>sp|Q6DEZ7|ESRP1_XENTR Epithelial splicing regulatory protein 1 OS=Xenopus tropicalis
GN=esrp1 PE=2 SV=1
Length = 687
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 254 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C V G+EG+LFV PD +
Sbjct: 314 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF----GQQCPVTGGKEGILFVTYPDNR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 370 PTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYS----------- 418
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ I +DCIRLRGLPY A + DI F+G+
Sbjct: 419 ----SAPLIPLPTPPIIPV--LPQPFIPPVNVRDCIRLRGLPYAA--TIEDILEFLGE 468
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 79/130 (60%), Gaps = 15/130 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG++FIQM S AYLAAQ H + M
Sbjct: 459 IEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTL-LSPGMLPHSSQPL 171
K RY+EVFQCS E+MN VL NG+ PP P +SP T ++P + L
Sbjct: 515 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAQAAVIPTEAAAL 574
Query: 172 YPQHNTQINP 181
Y Q + +NP
Sbjct: 575 Y-QPSLLLNP 583
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------- 429
R G+A V F +E+ ALK+HK + KRYIE+ ++ + V ++
Sbjct: 369 RPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYSSAPLIPLPTP 428
Query: 430 -------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
Q F+ + IR+RGLPY T + +++F E S ++ GV V
Sbjct: 429 PIIPVLPQPFIPPVNVRDCIRLRGLPYAATIEDILEFL---GEFSADIRT--HGVHMVLN 483
Query: 482 PDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GD+F+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 484 HQGRPSGDSFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 533
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
IIR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 TIIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 278
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL---- 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 279 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Query: 550 SAQQPMLSHLAQVPV 564
+A++ + Q PV
Sbjct: 339 TAEEVLAFFGQQCPV 353
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 305 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G+ LGSDE+E+I L++ +I+ KV
Sbjct: 6 PDYLVVLFTTTAGANGSKLGSDEKEVIQLLWKVINLANKKV 46
>sp|Q7ZY29|ESRP1_XENLA Epithelial splicing regulatory protein 1 OS=Xenopus laevis GN=esrp1
PE=2 SV=1
Length = 688
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 156/238 (65%), Gaps = 24/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 254 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF C V G+EG+LFV PD +
Sbjct: 314 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF----GQQCPVTGGKEGILFVTYPDNR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+
Sbjct: 370 PTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYS----------- 418
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
SA L +PV LPQ I +DCIRLRGLPY A + DI F+G+
Sbjct: 419 ----SAPLIPLPTPPIIPV--LPQPFIPPVNVRDCIRLRGLPYAA--TIEDILEFLGE 468
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 79/130 (60%), Gaps = 15/130 (11%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG++FIQM S AYLAAQ H + M
Sbjct: 459 IEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTL-LSPGMLPHSSQPL 171
K RY+EVFQCS E+MN VL NG+ PP P +SP T ++P + L
Sbjct: 515 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAQAAVIPTEAAAL 574
Query: 172 YPQHNTQINP 181
Y Q + +NP
Sbjct: 575 Y-QPSLLLNP 583
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------- 429
R G+A V F +E+ ALK+HK + KRYIE+ ++ + V ++
Sbjct: 369 RPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYSSAPLIPLPTP 428
Query: 430 -------QAFL-TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
Q F+ + IR+RGLPY T + +++F E S ++ GV V
Sbjct: 429 PIIPVLPQPFIPPVNVRDCIRLRGLPYAATIEDILEFL---GEFSADIRT--HGVHMVLN 483
Query: 482 PDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GD+F+ + + A A K HK+++ RY+E+F+ + E+ VL
Sbjct: 484 HQGRPSGDSFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVL 533
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
IIR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 TIIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEE 278
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNGL---- 549
D AL +HK +G RYIE++++T + ++ T L K N + GL
Sbjct: 279 HRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Query: 550 SAQQPMLSHLAQVPV 564
+A++ + Q PV
Sbjct: 339 TAEEVLAFFGQQCPV 353
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM----GNRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 305 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G+ LGSDE+E+I L++ +I+ KV
Sbjct: 6 PDYLVVLFTTTAGANGSKLGSDEKEVIQLLWKVINLANKKV 46
>sp|Q5ZLR4|ESRP2_CHICK Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2
PE=2 SV=1
Length = 701
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 151/225 (67%), Gaps = 20/225 (8%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 254 GGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G E C V G+EG+LFVK PDG+
Sbjct: 314 SNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFL--GPE--CPVTGGKEGLLFVKYPDGR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P +L +
Sbjct: 370 PTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTP 429
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
+ ++ +G+ +DC+RLRGLPY A
Sbjct: 430 IIPVIPPPYTIA----------------TGSIRDCVRLRGLPYTA 458
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL+F+G+ ++I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 460 IDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMM---- 515
Query: 122 KQRYIEVFQCSGEDMNLVLNG 142
K RY+EVFQCSGE+MN VL G
Sbjct: 516 KDRYVEVFQCSGEEMNFVLMG 536
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 368 GRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 427
Query: 422 --AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
T + +R+RGLPY ++DF T + GV V
Sbjct: 428 TPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILDFMGDATADI-----KPHGVHMV 482
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + ++A K HK+ + RY+E+F+ + E+ VL
Sbjct: 483 LNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 534
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V
Sbjct: 221 TVDSETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVR 273
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME-----LPKNNSLTSSNNG 548
F E+ D AL +HK +G RYIE++++T E ++ T L K N + G
Sbjct: 274 FVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRG 333
Query: 549 L---SAQQPMLSHLA-QVPV 564
L + Q+ +L L + PV
Sbjct: 334 LPFTATQEDVLGFLGPECPV 353
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ + LA + RH +M RYIEV++ +GE
Sbjct: 250 NIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALE-RHKHHM----GSRYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+ + G + +S + ++ LP ++
Sbjct: 305 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTA 338
Score = 39.7 bits (91), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIID 38
V F ATAG G LGSDE+E+ILL++ ++D
Sbjct: 11 VLFGATAGAYGAKLGSDERELILLVWQVVD 40
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E +L FLG E +G+ V G+P+G+AF+ E A A + +H I GK
Sbjct: 341 EDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALK-KHKE--ILGK 397
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 398 --RYIELFRSTAAEVQQVLN 415
>sp|Q9H6T0|ESRP2_HUMAN Epithelial splicing regulatory protein 2 OS=Homo sapiens GN=ESRP2
PE=1 SV=1
Length = 727
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGTEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 401 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAP 460
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P P GT +DC+RLRGLPY A + DI F+G+
Sbjct: 461 LL-------------PIPFPLAP------GTGRDCVRLRGLPYTA--TIEDILSFLGE 497
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV----AGGNNNEAQA 431
GR G+A F +E AL+RHK + KRYIE+ ++ + V A G
Sbjct: 399 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLT 458
Query: 432 F--------LTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
L G + +R+RGLPY T + ++ F E + ++ GV V
Sbjct: 459 APLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL---GEAAADIR--PHGVHMVLNQ 513
Query: 483 DGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 514 QGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 562
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 335
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 336 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 374 VLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 428
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 429 RYIELFRSTAAEVQQVLN 446
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P V F ATAG G LGSDE ++ILL++ +++ +V
Sbjct: 27 PGSLVVLFGATAGALGRDLGSDETDLILLVWQVVEPRSRQV 67
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGGN 425
GV + L+ GR +G+A ++ E A +R HK + +RY+EV + E+ V G
Sbjct: 506 GVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVLMGG 565
Query: 426 N 426
Sbjct: 566 T 566
>sp|Q8K0G8|ESRP2_MOUSE Epithelial splicing regulatory protein 2 OS=Mus musculus GN=Esrp2
PE=2 SV=1
Length = 717
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAP 450
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 451 LL-------------PIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 487
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQATPALIPTETTA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-------------- 421
GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 389 GRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLT 448
Query: 422 ----------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
AGG + +R+RGLPY T + ++ F E + ++
Sbjct: 449 APLLPIPFPLAGGTGRDC-----------VRLRGLPYTATIEDILSFL---GEAAADIR- 493
Query: 472 GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +VL
Sbjct: 494 -PHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMMKERYVEVVPCSTEEMSRVL 552
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVDS 298
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 299 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ LA Q RH +M RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
PQ V F ATAG G LGSDE ++ILL++ +++ +V
Sbjct: 27 PQSLVVLFGATAGALGPDLGSDETDLILLVWQVVEPRSRQV 67
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 364 VLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 418
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 419 RYIELFRSTAAEVQQVLN 436
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGGN 425
GV + L+ GR +G+A ++ + E A +R HK + +RY+EV + E+ V G
Sbjct: 496 GVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMMKERYVEVVPCSTEEMSRVLMGG 555
Query: 426 N 426
+
Sbjct: 556 S 556
>sp|B2RYJ8|ESRP2_RAT Epithelial splicing regulatory protein 2 OS=Rattus norvegicus
GN=Esrp2 PE=2 SV=1
Length = 716
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 152/238 (63%), Gaps = 26/238 (10%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 274 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 333
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+DF G E C V G +G+LFV+ PDG+
Sbjct: 334 SLEVARFLSREDQVILRLRGLPFSAGPADVLDFL--GPE--CPVTGGVDGLLFVRHPDGR 389
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P +LT+
Sbjct: 390 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASPLLPTLTAP 449
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 450 LL-------------PIPFP------LAGGTGRDCVRLRGLPYTA--TIEDILSFLGE 486
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 477 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVM---- 532
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP SP ++P +
Sbjct: 533 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQASPALIPTETTA 592
Query: 171 LYP 173
LYP
Sbjct: 593 LYP 595
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 41/192 (21%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-- 421
G+ G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 376 GVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 435
Query: 422 ----------------------AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
AGG + +R+RGLPY T + ++ F
Sbjct: 436 RYAASPLLPTLTAPLLPIPFPLAGGTGRDC-----------VRLRGLPYTATIEDILSFL 484
Query: 460 EAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIEL 518
E + ++ GV V G+ +GDAF+ E A A + HK+ + RY+E+
Sbjct: 485 ---GEAAADIR--PHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEV 539
Query: 519 FRSTTAEVQQVL 530
+T E+ +VL
Sbjct: 540 VPCSTEEMSRVL 551
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 245 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 297
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 333
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M RYIEV++ +GE
Sbjct: 270 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHM----GVRYIEVYKATGE 324
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 325 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 360
Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L+FLG E G+ V + G+P+G+AF E A A LR ++ M+ +
Sbjct: 363 VLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELA--QAALRRHKGML---GK 417
Query: 124 RYIEVFQCSGEDMNLVLN 141
RYIE+F+ + ++ VLN
Sbjct: 418 RYIELFRSTAAEVQQVLN 435
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
PQ V F ATAG G LGSDE ++ILL++ +++ +V
Sbjct: 27 PQSLVVLFGATAGALGPDLGSDETDLILLVWQVVEPRSRQV 67
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGGN 425
GV + L+ GR +G+A ++ + E A +R HK + +RY+EV + E+ V G
Sbjct: 495 GVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVLMGG 554
Query: 426 N 426
+
Sbjct: 555 S 555
>sp|Q22708|SYM2_CAEEL RNA-binding protein sym-2 OS=Caenorhabditis elegans GN=sym-2 PE=2
SV=3
Length = 618
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 144/225 (64%), Gaps = 33/225 (14%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ALCLS+ GRRNGE +V+F QE RD+ALKRH++ + RYIEV KA ++F++VA G+
Sbjct: 209 GGIALCLSSEGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGS 268
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA F++ A +I+RMRGLPY+CT Q+ FFE + + +LF+ + DG+
Sbjct: 269 STEAMEFVSANA-IIVRMRGLPYDCTDAQIRTFFEP--------LKLTDKILFITRTDGR 319
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSS 545
TGDAFV FE EE+A + L KH++ IG RYIELF+ST AEVQQV+ + N + SS
Sbjct: 320 PTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRC------NLINSS 373
Query: 546 NNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
P +++ + P +KDC+RLRGLPYEA
Sbjct: 374 --------PAVANAVEAP----------EEKKKDCVRLRGLPYEA 400
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ V+HI+ FLG+FA+ + +QGVHMVYN+QG PSGEAFIQM +E +A A HN M
Sbjct: 399 EATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVHNNFMS 458
Query: 119 FGKKQRYIEVFQCSGEDMNL 138
GKK+RYIEVFQ S E++NL
Sbjct: 459 VGKKKRYIEVFQASAEELNL 478
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGED---------FINVAGGNN 426
GR G+A V+F +E L +H+ I +RYIE+ K+ + IN +
Sbjct: 318 GRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSSPAVA 377
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
N +A + + R+RGLPYE T + ++ F M +GV V G
Sbjct: 378 NAVEAPEEKKKDCV-RLRGLPYEATVQHIVTFL-----GDFATMVKFQGVHMVYNNQGHP 431
Query: 487 TGDAFVLFEKEEEADK-ALSKHKESIGI----RYIELFRSTTAEV 526
+G+AF+ E+ A A H + + RYIE+F+++ E+
Sbjct: 432 SGEAFIQMINEQAASACAAGVHNNFMSVGKKKRYIEVFQASAEEL 476
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
E Q G V+ R RGLP++ + V FF AG +++ G G+ +G+
Sbjct: 170 EDQEVGADGDNVVCRARGLPWQASDHHVAQFF-AG----LDIVPG--GIALCLSSEGRRN 222
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL----NKTMELPKNNSLT 543
G+ V F +E D AL +H+ + RYIE++++ E V + ME N++
Sbjct: 223 GEVLVQFSSQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGSSTEAMEFVSANAII 282
Query: 544 SSNNGL 549
GL
Sbjct: 283 VRMRGL 288
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 64 HILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
H+ +F +IV G+ + +S+G+ +GE +Q S+ S LA L+ +RN +
Sbjct: 196 HVAQFFAGL--DIVPGGIALCLSSEGRRNGEVLVQFSSQESRDLA--LKRHRNFLLS--- 248
Query: 124 RYIEVFQCSGEDMNLVLNG 142
RYIEV++ ++ V G
Sbjct: 249 RYIEVYKAGLDEFMHVATG 267
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 83 MVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNG 142
+ + G+P+G+AF+Q ++E A L+H R +I QRYIE+F+ + ++ V+
Sbjct: 312 FITRTDGRPTGDAFVQFETEEDAQ-QGLLKH-RQVI---GQRYIELFKSTAAEVQQVVKR 366
Query: 143 V-LPPTSPAIS 152
L +SPA++
Sbjct: 367 CNLINSSPAVA 377
>sp|A8WPC5|SYM2_CAEBR RNA-binding protein sym-2 OS=Caenorhabditis briggsae GN=sym-2 PE=3
SV=2
Length = 634
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 35/181 (19%)
Query: 412 KANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
KANG+ ++ EA F++ A VI+RMRGLPY+CT Q+ FFE +
Sbjct: 259 KANGKIRKKPFLCSSAEAMDFVSANA-VIVRMRGLPYDCTDTQIRAFFEP--------LK 309
Query: 472 GEEGVLFVKKPDGKATG--DAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
E +LF+ + DG+ TG DAFV FE EE+A + L KH++ IG RYIELF+ST AEVQQV
Sbjct: 310 LTEKILFITRTDGRPTGNCDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQV 369
Query: 530 LNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYE 589
+ + N + S+ P++++ +V + +KDC+RLRGLPYE
Sbjct: 370 VKRC------NLINSA--------PVVANAVEV----------SDEKKKDCVRLRGLPYE 405
Query: 590 A 590
A
Sbjct: 406 A 406
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HI+ FLG+FA+ + +QGVHMVYN+QG PSGEAFIQM SE +A A HN M GK
Sbjct: 408 VQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMISEQAAAATASGVHNNFMCVGK 467
Query: 122 KQRYIEVFQCSGEDMN 137
K+RYIEVFQ S E++N
Sbjct: 468 KKRYIEVFQSSAEELN 483
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGA- 437
N +A V+F +E L +H+ I +RYIE+ K+ + V N A + A
Sbjct: 327 NCDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSAPVVANAV 386
Query: 438 -------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
+ +R+RGLPYE T + +++F M +GV V G +G+A
Sbjct: 387 EVSDEKKKDCVRLRGLPYEATVQHIVNFLGDFAN-----MVKFQGVHMVYNNQGNPSGEA 441
Query: 491 FV-LFEKEEEADKALSKHKESIGI----RYIELFRSTTAEV 526
F+ + ++ A A H + + RYIE+F+S+ E+
Sbjct: 442 FIQMISEQAAAATASGVHNNFMCVGKKKRYIEVFQSSAEEL 482
>sp|Q60HC3|HNRPF_MACFA Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis
GN=HNRNPF PE=2 SV=3
Length = 415
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF--RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF +T A ++ M+ +S ++ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSSAQATYSGLESQ 395
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF
PE=1 SV=3
Length = 415
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
>sp|Q5E9J1|HNRPF_BOVIN Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF
PE=2 SV=3
Length = 414
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT +++I FF +G E N G+
Sbjct: 99 HSGPNSADTA-----NDGFVRLRGLPFGCTKEEIIQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS ++N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADTANDGF 112
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELF-RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK + ++ RYIELF STT + M S S+ +GL +Q
Sbjct: 342 VAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQMMQGMGVSTQSTYSGLESQ 394
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 VEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLN 141
RYIEVF+ +M+ VL
Sbjct: 79 GHRYIEVFKSHRTEMDWVLK 98
>sp|Q794E4|HNRPF_RAT Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus
GN=Hnrnpf PE=1 SV=3
Length = 415
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
>sp|Q9Z2X1|HNRPF_MOUSE Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf
PE=1 SV=3
Length = 415
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA-----NDGFVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E++ AL K +ES+G RYIE+F+S E+ VL + NS S+N+G
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKHS----GPNSADSANDGF 112
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R +
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPA 150
RYIEVF+ +M+ VL P ++ +
Sbjct: 79 GHRYIEVFKSHRTEMDWVLKHSGPNSADS 107
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
>sp|Q12849|GRSF1_HUMAN G-rich sequence factor 1 OS=Homo sapiens GN=GRSF1 PE=1 SV=3
Length = 480
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 178 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 237
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 238 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 285
Query: 484 GK-ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 286 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 151 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 205
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++ S N+G+
Sbjct: 206 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV---KSSPVVNDGV---------- 251
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 252 ---------------------VRLRGLPYS--CNEKDIVDFFAG 272
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 390 EAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 440
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 441 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 472
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 163 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 218
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 219 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 248
>sp|Q8C5Q4|GRSF1_MOUSE G-rich sequence factor 1 OS=Mus musculus GN=Grsf1 PE=1 SV=2
Length = 479
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 26/221 (11%)
Query: 314 LPKFPVHQL------NQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
LP P ++L ++ VY I G P + V+++ LN G
Sbjct: 128 LPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCT--VEDV-----LNFFSDCRIRNSENG 180
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNN 427
+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQV 240
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK-A 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 241 KPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRRK 288
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 289 TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 44/164 (26%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHL 559
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQVK---------------------- 241
Query: 560 AQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 242 --------PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 271
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + M G
Sbjct: 162 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE---KHRMYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 247
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF + GKAT
Sbjct: 389 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVR---------ITMEYSSSGKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 471
>sp|Q5RD26|HNRH2_PONAB Heterogeneous nuclear ribonucleoprotein H2 OS=Pongo abelii
GN=HNRNPH2 PE=2 SV=1
Length = 449
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|P55795|HNRH2_HUMAN Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens
GN=HNRNPH2 PE=1 SV=1
Length = 449
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E EEE
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|Q6AY09|HNRH2_RAT Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus
GN=Hnrnph2 PE=1 SV=1
Length = 449
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 AEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 33.1 bits (74), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|P70333|HNRH2_MOUSE Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus
GN=Hnrnph2 PE=1 SV=1
Length = 449
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 AEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|Q3SZF3|HNRH2_BOVIN Heterogeneous nuclear ribonucleoprotein H2 OS=Bos taurus GN=HNRNPH2
PE=2 SV=1
Length = 449
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV E E+E
Sbjct: 12 VVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDE 66
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
AL K +E++G RY+E+F+S + E+ VL T NS ++N+G
Sbjct: 67 VKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGF 112
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF + N M V PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFF-----SPLNPMR----VHIEIGPDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R +
Sbjct: 24 ADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM--- 78
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVG 155
RY+EVF+ + +M+ VL P SP + G
Sbjct: 79 GHRYVEVFKSNSVEMDWVLKHT-GPNSPDTANDG 111
Score = 33.1 bits (74), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens
GN=HNRNPH1 PE=1 SV=4
Length = 449
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|O35737|HNRH1_MOUSE Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus
GN=Hnrnph1 PE=1 SV=3
Length = 449
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|Q8VHV7|HNRH1_RAT Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus
GN=Hnrnph1 PE=1 SV=2
Length = 449
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 14/166 (8%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANG--EDFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA-----NDGFVRLRGLPFGCSEEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGL 549
E+E AL K +E++G RY+E+F+S E+ VL T NS ++N+G
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGF 112
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIETG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ--QVLNKTMELPKNNSLTSSNNGLSAQ 552
A+SK K ++ RY+ELF ++TA ++ +EL N++ +S +Q
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQ 395
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM---GHRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSPAISPVG 155
VL P SP + G
Sbjct: 96 VLKHT-GPNSPDTANDG 111
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A L+ ++ I
Sbjct: 125 EEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKA--LKKHKERI---G 177
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 178 HRYIEIFKSS 187
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3
Length = 992
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 55/312 (17%)
Query: 321 QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNG 380
Q+N +V ++P NP L V + S + N + + L + V L GR NG
Sbjct: 287 QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNG 344
Query: 381 EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG---- 436
+V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q+ G
Sbjct: 345 NGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHP 403
Query: 437 ------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDG 472
A + ++GLP+E K VIDFF+ +++
Sbjct: 404 PPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----KLDIV-- 456
Query: 473 EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
E+ + P+GKATG+ FV F + + AL +HK+ +G R+I++ T + + ++
Sbjct: 457 EDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDM 516
Query: 533 TMELPKNNS-----LTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIR-LRGL 586
+ +N S L + G + + +H+ +P S T+ D ++ L G+
Sbjct: 517 IRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPF---------SITKMDVLQFLEGI 567
Query: 587 PYE--ALCILMD 596
P + A+ +L+D
Sbjct: 568 PVDESAVHVLVD 579
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F + AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDESAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTLEDMREI 627
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF T + DG GV V G G+AF++F +E
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLT-----IPDG--GVHIV----GGELGEAFIVFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A + + +I + L S+ E+Q ++
Sbjct: 52 DARLGMMRTGGTIKGSKVTLLLSSKTEMQNMI 83
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
II+++ +P+ + +++DFF V+ G + + +K G TG+A V FE +
Sbjct: 916 TIIKVQNMPFTVSIDEILDFFYG-----YQVIPGSVCLKYNEK--GMPTGEAMVAFESRD 968
Query: 499 EADKA-LSKHKESIGIRYIEL 518
EA A + + IG R ++L
Sbjct: 969 EATAAVIDLNDRPIGSRKVKL 989
Score = 36.6 bits (83), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+H+++F + +IV +++ Y G+ +GE F++ ++ + Y AA RH + M
Sbjct: 444 KHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRND-ADYKAALCRHKQYM----G 496
Query: 123 QRYIEVFQCSGEDM 136
R+I+V + + M
Sbjct: 497 NRFIQVHPITKKGM 510
>sp|Q5RBM8|RBM12_PONAB RNA-binding protein 12 OS=Pongo abelii GN=RBM12 PE=2 SV=1
Length = 932
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+H+++F + +IV +++ Y G+ +GE F++ +E + Y AA RH + M
Sbjct: 444 KHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNE-ADYKAALCRHKQYM----G 496
Query: 123 QRYIEVFQCSGEDM 136
R+I+V + + M
Sbjct: 497 NRFIQVHPITKKGM 510
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF T + DG GV V G G+AF++F +E
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLT-----IPDG--GVHIV----GGELGEAFIVFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A + + +I + L S+ E+Q ++
Sbjct: 52 DARLGMMRTGGTIKGSKVTLLLSSKTEMQNMI 83
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+++ +P+ + +++DFF V+ G + + +K G TG+A V FE +
Sbjct: 858 TVIKVQNMPFTVSIDEILDFFYG-----YQVIPGSVCLKYNEK--GMPTGEAMVAFESRD 910
Query: 499 EADKA-LSKHKESIGIRYIELF 519
EA A + + IG R + L+
Sbjct: 911 EATAAVIDLNDRPIGSRKVNLY 932
>sp|Q8SQ27|RBM12_MACMU RNA-binding protein 12 OS=Macaca mulatta GN=RBM12 PE=2 SV=1
Length = 932
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+H+++F + +IV +++ Y G+ +GE F++ +E + Y AA RH + M
Sbjct: 444 KHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNE-ADYKAALCRHKQYM----G 496
Query: 123 QRYIEVFQCSGEDM 136
R+I+V + + M
Sbjct: 497 NRFIQVHPITKKGM 510
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF T + DG GV V G G+AF++F +E
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLT-----IPDG--GVHIV----GGELGEAFIVFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A + + +I + L S+ E+Q ++
Sbjct: 52 DARLGMMRTGGTIKGSKVTLLLSSKTEMQNMI 83
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+++ +P+ + +++DFF V+ G + + +K G TG+A V FE +
Sbjct: 856 TVIKVQNMPFTVSIDEILDFFYG-----YQVIPGSVCLKYNEK--GMPTGEAMVAFESRD 908
Query: 499 EADKA-LSKHKESIGIRYIEL 518
EA A + + IG R ++L
Sbjct: 909 EATAAVIDLNDRPIGSRKVKL 929
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 36/161 (22%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ + G+P+ V DFF ++ +++ K G+ G+ V F ++
Sbjct: 306 VSVHGMPFSAMENDVRDFFHGLRVDAVHLL---------KDHVGRNNGNGLVKFLSPQDT 356
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNN-GLSAQQPMLSHL 559
+AL +++ + RY+E+ S E Q V +T N G S Q
Sbjct: 357 FEALKRNRMLMIQRYVEV--SPATERQWVA-------AGGHITFKQNMGPSGQ------- 400
Query: 560 AQVPVPYLPQHIITSGTRKD----------CIRLRGLPYEA 590
+ P LP+ SG ++ C+ L+GLP+EA
Sbjct: 401 SHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEA 441
>sp|Q9NTZ6|RBM12_HUMAN RNA-binding protein 12 OS=Homo sapiens GN=RBM12 PE=1 SV=1
Length = 932
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 315 PKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSA 374
P PV+ + P P NP L V + S + N + + L + V L
Sbjct: 279 PLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDH 338
Query: 375 FGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLT 434
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+ Q
Sbjct: 339 VGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQNMGP 397
Query: 435 RG----------------------------AQVIIRMRGLPYECTAKQVIDFFEAGTENS 466
G A + ++GLP+E K VIDFF+
Sbjct: 398 SGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFK-----K 452
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
+++ E+ + P+GKATG+ FV F E + AL +HK+ +G R+I++
Sbjct: 453 LDIV--EDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV 502
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFL-- 433
G+ GE V F ++ AL RHK ++ R+I+V + + Q F
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 434 -----------TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMILNPEGDVNSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+H+++F + +IV +++ Y G+ +GE F++ +E + Y AA RH + M
Sbjct: 444 KHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNE-ADYKAALCRHKQYM----G 496
Query: 123 QRYIEVFQCSGEDM 136
R+I+V + + M
Sbjct: 497 NRFIQVHPITKKGM 510
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR++GLP + FF T + DG GV V G G+AF++F +E
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLT-----IPDG--GVHIV----GGELGEAFIVFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
+A + + +I + L S+ E+Q ++
Sbjct: 52 DARLGMMRTGGTIKGSKVTLLLSSKTEMQNMI 83
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
+I+++ +P+ + +++DFF V+ G + + +K G TG+A V FE +
Sbjct: 856 TVIKVQNMPFTVSIDEILDFFYG-----YQVIPGSVCLKYNEK--GMPTGEAMVAFESRD 908
Query: 499 EADKA-LSKHKESIGIRYIEL 518
EA A + + IG R ++L
Sbjct: 909 EATAAVIDLNDRPIGSRKVKL 929
>sp|P31942|HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens
GN=HNRNPH3 PE=1 SV=2
Length = 346
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+ MRGLP+ T + +FF ++ G DG+ATG+A V F E+
Sbjct: 196 FVHMRGLPFRATENDIANFFSPLNPIRVHIDIG---------ADGRATGEADVEFVTHED 246
Query: 500 ADKALSKHKESIGIRYIELFRSTT 523
A A+SK K ++ RYIELF ++T
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLNST 270
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
>sp|Q8R3C6|RBM19_MOUSE Probable RNA-binding protein 19 OS=Mus musculus GN=Rbm19 PE=1 SV=1
Length = 952
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+++RG P+ T K VI+F + + V+ G TG FV EEE
Sbjct: 295 VKLRGAPFNVTEKNVIEFLAPLKPVAIRI---------VRNAHGNKTGYVFVDLSSEEEV 345
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
KAL +++ +G RYIE+FR A
Sbjct: 346 KKALKCNRDYMGGRYIEVFREKQA 369
>sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19 PE=1 SV=3
Length = 960
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+++RG P+ T K V++F + + V+ G TG FV F EEE
Sbjct: 295 TVKLRGAPFNVTEKNVMEFLAPLKPVAIRI---------VRNAHGNKTGYIFVDFSNEEE 345
Query: 500 ADKALSKHKESIGIRYIELFR 520
+AL ++E +G RYIE+FR
Sbjct: 346 VKQALKCNREYMGGRYIEVFR 366
>sp|Q5RFT7|RB12B_PONAB RNA-binding protein 12B OS=Pongo abelii GN=RBM12B PE=2 SV=1
Length = 761
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF C +GV+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFFSG----LCV-----DGVIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 210 GLKCHRSFMGSRFIEVMQGS 229
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 100/269 (37%), Gaps = 56/269 (20%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + GV GR NG+AIV+F LK H+ + R+IEV + + + +I
Sbjct: 178 LCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEF- 236
Query: 423 GGNNNEAQAFLTRGAQ-------------------------------VIIRMRGLPYECT 451
GGN + L R + + ++ L
Sbjct: 237 GGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSID 296
Query: 452 AKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESI 511
+ + +FF GT+ + +E + F+ K D T AFV+F+ ++ + ALS HK +
Sbjct: 297 ERDLRNFFR-GTDLT------DEQIRFLYK-DENRTRYAFVMFKTLKDYNTALSLHKTVL 348
Query: 512 GIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHI 571
R + + +Q+L K S + P V Y +
Sbjct: 349 QYRPVHI---DPISRKQMLKFIARYEKKRSGS----------PERDRPGHVSQKYSQE-- 393
Query: 572 ITSGTRKDCIRLRGLPYEALCILMDIFFV 600
+ +K CI +R P++ + + FF
Sbjct: 394 -GNSGQKLCIYIRNFPFDVTKVEVQKFFA 421
>sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2
Length = 1001
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNG 548
+A +A+S+ I +ELF S+ AE+Q KT+E+ + + + G
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKRTDRVGRGRPG 97
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+F+K DG+ GDA V F +A
Sbjct: 159 LRGLPYLVNEDDVRVFF------SGLCVDG---VIFLKHHDGRNNGDAIVKFASCVDASG 209
Query: 503 ALSKHKESIGIRYIEL 518
L H+ +G R+IE+
Sbjct: 210 GLKCHRSFMGSRFIEV 225
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 42/262 (16%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + GV GR NG+AIV+F LK H+ + R+IEV + + + +I
Sbjct: 178 LCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEF- 236
Query: 423 GGNNNEAQAFLTRGAQ---------VIIRMRG---LPYECTAKQVIDFF----------- 459
GGN + L R + R R P ++ + F+
Sbjct: 237 GGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSID 296
Query: 460 EAGTENSCNVMD-GEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIEL 518
E N D +E + F+ K D T AFV+F+ ++ + ALS HK + R + +
Sbjct: 297 ERDLRNFFRGTDLTDEQIRFLYK-DENRTRYAFVMFKTLKDYNTALSLHKTVLQYRPVHI 355
Query: 519 FRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRK 578
+ ++ + + + E ++ SL G +Q+ +Q + +K
Sbjct: 356 DPISRKQMLKFIAR-YEKKRSGSLERDRPGHVSQK-----YSQE----------GNSGQK 399
Query: 579 DCIRLRGLPYEALCILMDIFFV 600
CI +R P++ + + FF
Sbjct: 400 LCIYIRNFPFDVTKVEVQKFFA 421
>sp|Q66JV4|R12BB_MOUSE RNA-binding protein 12B-B OS=Mus musculus GN=Rbm12b2 PE=1 SV=2
Length = 834
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.7 bits (91), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 38/261 (14%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + GV L GR NG+AIV+F LK H+ + R+IEV + + + +I
Sbjct: 177 LCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFG 236
Query: 423 GGNNNEAQAFLTR-----------GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
G R G R ++ + F+ S N
Sbjct: 237 GTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGFYVHLKNLSLNTNK 296
Query: 472 GE------------EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ + + FV K D + T AFV+F+ +++ + AL HK + R + +
Sbjct: 297 RDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALGLHKTVLQYRPVLID 355
Query: 520 RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKD 579
+ E+ +++ + E + SL G +Q+ Q + +K
Sbjct: 356 PVSRKEMVRII-ECYEKKRPESLEKERPGRVSQK-------------YSQEGFSGSGQKL 401
Query: 580 CIRLRGLPYEALCILMDIFFV 600
CI +R LP++ + FF
Sbjct: 402 CIYIRNLPFDVTKGEVQKFFA 422
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 430 QAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGD 489
+ F G ++ I +R LP++ T +V FF + E+ + + G G+
Sbjct: 392 EGFSGSGQKLCIYIRNLPFDVTKGEVQKFF-------ADFSLVEDDIYLLCDDKGVGLGE 444
Query: 490 AFVLFEKEEEADKA 503
A V F+ EE+A KA
Sbjct: 445 ALVRFKSEEQAMKA 458
>sp|Q80YR9|R12BA_MOUSE RNA-binding protein 12B-A OS=Mus musculus GN=Rbm12b1 PE=1 SV=2
Length = 836
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF+ T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLT-----IPDG--GVHII----GGKVGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A +A+S+ I +ELF S+ E+Q KT+E+ + + G A
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKVEMQ----KTIEMKRTARVGRGRPGSGA 100
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 443 MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADK 502
+RGLPY V FF S +DG V+ +K DG+ GDA V F +A
Sbjct: 158 LRGLPYLVNEDDVRVFF------SGLCVDG---VILLKHHDGRNNGDAIVKFASCVDASG 208
Query: 503 ALSKHKESIGIRYIELFRST 522
L H+ +G R+IE+ + +
Sbjct: 209 GLKCHRSFMGSRFIEVMQGS 228
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 38/261 (14%)
Query: 363 LGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
L + GV L GR NG+AIV+F LK H+ + R+IEV + + + +I
Sbjct: 177 LCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFG 236
Query: 423 GGNNNEAQAFLTR-----------GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMD 471
G R G R ++ + F+ S N
Sbjct: 237 GTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGFYVHLKNLSLNTNK 296
Query: 472 GE------------EGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
+ + + FV K D + T AFV+F+ +++ + AL HK + R + +
Sbjct: 297 RDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALGLHKTVLQYRPVLID 355
Query: 520 RSTTAEVQQVLNKTMELPKNNSLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKD 579
+ E+ +++ + E + SL G +Q+ Q + +K
Sbjct: 356 PVSRKEMVRII-ECYEKKRPESLEKERPGRVSQK-------------YSQEGFSGSGQKL 401
Query: 580 CIRLRGLPYEALCILMDIFFV 600
CI +R LP++ + FF
Sbjct: 402 CIYIRNLPFDVTKGEVQKFFA 422
>sp|B8HVV6|G6PI_CYAP4 Glucose-6-phosphate isomerase OS=Cyanothece sp. (strain PCC 7425 /
ATCC 29141) GN=pgi PE=3 SV=1
Length = 529
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 29/152 (19%)
Query: 42 NKVLITSQYKEPIQGFKKVLVEHILEFLG---EFASNIVYQGVHMVYNSQGQPSGEAFIQ 98
K ++ YK+ +Q F + L + ++E LG + +V+QG+ VY ++G A++Q
Sbjct: 297 KKDMVVLPYKDSLQLFSRYLQQLVMESLGKEKDLQGQVVHQGI-AVYGNKGTTDQHAYVQ 355
Query: 99 MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTL 158
QLR N F +IEV Q G P I+ G L
Sbjct: 356 -----------QLREGLNNFF---LTFIEVLQDR--------QGASVEVEPGITS-GDYL 392
Query: 159 LSPGMLPHSSQPLYPQHNTQINPGLSHLDPLV 190
G+L + Q LY + I L + PL
Sbjct: 393 --SGLLLGTRQALYEKQRDSITLTLPQVTPLT 422
>sp|Q9FGL9|PTBP2_ARATH Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis
thaliana GN=At5g53180 PE=2 SV=1
Length = 429
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 30/115 (26%)
Query: 440 IIRMRGLPYECTAKQVIDF---FEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +R LP+ECT +++I+ F CNV G AF+ FE
Sbjct: 19 VLHLRNLPWECTEEELIELGKPFGTVVNTKCNV--------------GANRNQAFIEFED 64
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNNSLTSSNNGLSA 551
+A + +S + ++++E QV KT+ L +N NN +A
Sbjct: 65 LNQAIQMIS-------------YYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTA 106
>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium
discoideum GN=mrd1 PE=3 SV=1
Length = 895
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 427 NEAQAFLTRGAQ-----VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGE-EGVLFVK 480
N Q+ + G Q I ++ LP+E T K++ F A GE + V K
Sbjct: 778 NSKQSIKSNGGQPNKPSSKIIIKNLPFESTIKEIRKLFTAY---------GEIQSVRIPK 828
Query: 481 KPDGKATGDAFVLFEKEEEADKAL 504
KP+G G FV F EEEA A+
Sbjct: 829 KPNGGHRGFGFVEFLTEEEAKNAM 852
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236,099,380
Number of Sequences: 539616
Number of extensions: 10673743
Number of successful extensions: 33516
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 32305
Number of HSP's gapped (non-prelim): 1049
length of query: 612
length of database: 191,569,459
effective HSP length: 123
effective length of query: 489
effective length of database: 125,196,691
effective search space: 61221181899
effective search space used: 61221181899
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)