Your job contains 1 sequence.
>psy16116
MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQYKEPIQGFKKV
LVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG
KKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQIN
PGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTPTL
IPAPSPNALMPPPLNSKSTTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPF
FFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE
QVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN
VAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK
KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKNN
SLTSSNNGLSAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIFFV
GQQDSFVHKVPK
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16116
(612 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023441 - symbol:fus "fusilli" species:7227 "Droso... 697 2.6e-89 3
ZFIN|ZDB-GENE-030131-9824 - symbol:esrp2 "epithelial spli... 610 2.6e-72 3
UNIPROTKB|F1RY52 - symbol:ESRP1 "Uncharacterized protein"... 543 5.8e-69 3
MGI|MGI:1917326 - symbol:Esrp1 "epithelial splicing regul... 548 7.4e-69 3
RGD|1560481 - symbol:Esrp1 "epithelial splicing regulator... 545 1.5e-68 3
UNIPROTKB|F1LP81 - symbol:Esrp1 "Epithelial-splicing regu... 545 1.5e-68 3
ZFIN|ZDB-GENE-070112-1732 - symbol:esrp1 "epithelial spli... 622 1.8e-68 2
UNIPROTKB|F1MVN3 - symbol:ESRP1 "Uncharacterized protein"... 544 1.9e-68 3
UNIPROTKB|Q6DEZ7 - symbol:esrp1 "Epithelial splicing regu... 546 2.5e-68 3
UNIPROTKB|Q7ZY29 - symbol:esrp1 "Epithelial splicing regu... 546 2.5e-68 3
UNIPROTKB|Q6NXG1 - symbol:ESRP1 "Epithelial splicing regu... 545 2.5e-68 3
UNIPROTKB|Q5ZLR4 - symbol:ESRP2 "Epithelial splicing regu... 546 5.4e-63 3
RGD|1310855 - symbol:Esrp2 "epithelial splicing regulator... 498 4.0e-62 3
UNIPROTKB|G3V8M2 - symbol:Esrp2 "Epithelial-splicing regu... 498 4.3e-62 3
MGI|MGI:1924661 - symbol:Esrp2 "epithelial splicing regul... 498 4.3e-62 3
UNIPROTKB|F1MSN9 - symbol:ESRP2 "Uncharacterized protein"... 499 1.3e-61 3
UNIPROTKB|F1PA85 - symbol:ESRP2 "Uncharacterized protein"... 498 1.4e-61 3
UNIPROTKB|Q9H6T0 - symbol:ESRP2 "Epithelial splicing regu... 500 2.4e-61 3
UNIPROTKB|H0YBB3 - symbol:ESRP1 "Epithelial-splicing regu... 545 6.1e-60 2
UNIPROTKB|H0YBR2 - symbol:ESRP1 "Epithelial-splicing regu... 545 6.1e-60 2
UNIPROTKB|F1PSN8 - symbol:ESRP1 "Uncharacterized protein"... 543 9.9e-60 2
UNIPROTKB|F1PQY5 - symbol:ESRP1 "Uncharacterized protein"... 543 9.9e-60 2
UNIPROTKB|F1P509 - symbol:ESRP1 "Uncharacterized protein"... 528 4.8e-58 2
WB|WBGene00006367 - symbol:sym-2 species:6239 "Caenorhabd... 437 3.6e-41 1
MGI|MGI:2138741 - symbol:Hnrnpf "heterogeneous nuclear ri... 260 6.2e-21 2
RGD|620366 - symbol:Hnrnpf "heterogeneous nuclear ribonuc... 260 6.2e-21 2
UNIPROTKB|P52597 - symbol:HNRNPF "Heterogeneous nuclear r... 260 6.2e-21 2
UNIPROTKB|Q60HC3 - symbol:HNRNPF "Heterogeneous nuclear r... 260 6.2e-21 2
UNIPROTKB|Q5E9J1 - symbol:HNRNPF "Heterogeneous nuclear r... 260 7.7e-21 2
UNIPROTKB|E2RB90 - symbol:HNRNPF "Uncharacterized protein... 260 7.7e-21 2
UNIPROTKB|F1RG16 - symbol:HNRNPF "Uncharacterized protein... 260 7.7e-21 2
UNIPROTKB|F5H5I6 - symbol:GRSF1 "G-rich sequence factor 1... 255 8.0e-20 1
UNIPROTKB|A6QPB2 - symbol:GRSF1 "Uncharacterized protein"... 255 8.0e-20 1
UNIPROTKB|D6RBM0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 243 1.0e-19 1
TAIR|locus:2156897 - symbol:AT5G66010 species:3702 "Arabi... 242 1.3e-19 1
UNIPROTKB|F1LRK4 - symbol:Grsf1 "Protein Grsf1" species:1... 252 2.0e-19 1
UNIPROTKB|F1MZF0 - symbol:GRSF1 "Uncharacterized protein"... 255 2.7e-19 1
UNIPROTKB|E5RI26 - symbol:ESRP1 "Epithelial-splicing regu... 238 3.5e-19 1
UNIPROTKB|H0Y8R1 - symbol:GRSF1 "G-rich sequence factor 1... 255 3.6e-19 1
UNIPROTKB|Q12849 - symbol:GRSF1 "G-rich sequence factor 1... 255 5.4e-19 2
UNIPROTKB|H0YAK1 - symbol:GRSF1 "G-rich sequence factor 1... 255 5.4e-19 1
ZFIN|ZDB-GENE-040426-1856 - symbol:hnrnph1 "heterogeneous... 245 5.5e-19 2
MGI|MGI:106479 - symbol:Grsf1 "G-rich RNA sequence bindin... 254 8.6e-19 1
UNIPROTKB|P55795 - symbol:HNRNPH2 "Heterogeneous nuclear ... 246 1.1e-18 2
UNIPROTKB|F1Q0B7 - symbol:GRSF1 "Uncharacterized protein"... 219 1.2e-18 2
UNIPROTKB|F1LMB8 - symbol:Grsf1 "Protein Grsf1" species:1... 252 1.5e-18 1
UNIPROTKB|I3L816 - symbol:HNRNPH1 "Uncharacterized protei... 243 1.6e-18 2
UNIPROTKB|E9PCY7 - symbol:HNRNPH1 "Heterogeneous nuclear ... 243 1.8e-18 2
MGI|MGI:1201779 - symbol:Hnrnph2 "heterogeneous nuclear r... 244 2.0e-18 2
RGD|1549784 - symbol:Hnrnph2 "heterogeneous nuclear ribon... 244 2.0e-18 2
UNIPROTKB|E2R8D6 - symbol:E2R8D6 "Uncharacterized protein... 243 2.2e-18 2
UNIPROTKB|P31943 - symbol:HNRNPH1 "Heterogeneous nuclear ... 243 2.6e-18 2
UNIPROTKB|F2Z5H9 - symbol:HNRNPH1 "Uncharacterized protei... 243 2.6e-18 2
RGD|620840 - symbol:Hnrph1 "heterogeneous nuclear ribonuc... 243 2.6e-18 2
UNIPROTKB|Q8VHV7 - symbol:Hnrnph1 "Heterogeneous nuclear ... 243 2.6e-18 2
MGI|MGI:1891925 - symbol:Hnrnph1 "heterogeneous nuclear r... 243 2.6e-18 2
UNIPROTKB|G3V9Q3 - symbol:Hnrph1 "Heterogeneous nuclear r... 243 2.6e-18 2
UNIPROTKB|A5D9B4 - symbol:HNRPH2 "Heterogeneous nuclear r... 243 2.6e-18 2
UNIPROTKB|Q3SZF3 - symbol:HNRNPH2 "Heterogeneous nuclear ... 243 2.6e-18 2
UNIPROTKB|E2RJH5 - symbol:HNRNPH2 "Uncharacterized protei... 243 2.6e-18 2
UNIPROTKB|E1BF20 - symbol:HNRNPH1 "Uncharacterized protei... 243 3.7e-18 2
UNIPROTKB|G8JLB6 - symbol:HNRNPH1 "Heterogeneous nuclear ... 243 3.7e-18 2
UNIPROTKB|F1RUP2 - symbol:GRSF1 "Uncharacterized protein"... 250 8.6e-18 2
FB|FBgn0259139 - symbol:glo "glorund" species:7227 "Droso... 247 9.3e-18 1
UNIPROTKB|F1NBV8 - symbol:HNRNPH1 "Uncharacterized protei... 239 1.4e-17 2
UNIPROTKB|F1NJJ4 - symbol:HNRNPH1 "Uncharacterized protei... 239 1.5e-17 2
UNIPROTKB|F1NJJ5 - symbol:HNRNPH1 "Uncharacterized protei... 239 1.9e-17 2
UNIPROTKB|F1NEG6 - symbol:HNRNPH1 "Uncharacterized protei... 239 1.9e-17 2
ZFIN|ZDB-GENE-030131-275 - symbol:hnrnph1l "heterogeneous... 232 2.4e-17 2
UNIPROTKB|I3L687 - symbol:HNRNPH2 "Uncharacterized protei... 195 5.5e-17 3
UNIPROTKB|F1LV61 - symbol:F1LV61 "Uncharacterized protein... 230 9.0e-17 2
ZFIN|ZDB-GENE-060825-196 - symbol:grsf1 "G-rich RNA seque... 230 1.7e-16 2
UNIPROTKB|E7EN40 - symbol:HNRNPH1 "Heterogeneous nuclear ... 164 4.4e-16 2
UNIPROTKB|D6RIU0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 6.0e-16 2
UNIPROTKB|D6RFM3 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 6.0e-16 2
UNIPROTKB|D6R9T0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 6.0e-16 2
UNIPROTKB|D6RDU3 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 6.0e-16 2
UNIPROTKB|D6RIH9 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 6.0e-16 2
UNIPROTKB|D6RJ04 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 6.0e-16 2
UNIPROTKB|D6RAM1 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 7.7e-16 2
ZFIN|ZDB-GENE-060421-3878 - symbol:zgc:136953 "zgc:136953... 222 1.8e-15 1
UNIPROTKB|G3N1Y9 - symbol:G3N1Y9 "Uncharacterized protein... 218 6.6e-15 1
UNIPROTKB|D6RIT2 - symbol:HNRNPH1 "Heterogeneous nuclear ... 196 1.2e-14 1
UNIPROTKB|E7EQJ0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 193 2.5e-14 1
UNIPROTKB|E5RGV0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 185 1.8e-13 1
UNIPROTKB|Q9NTZ6 - symbol:RBM12 "RNA-binding protein 12" ... 132 2.0e-13 2
UNIPROTKB|E1BMP6 - symbol:E1BMP6 "Uncharacterized protein... 197 2.2e-13 2
UNIPROTKB|J9NZV3 - symbol:RBM12 "Uncharacterized protein"... 132 3.6e-13 2
UNIPROTKB|F1P982 - symbol:RBM12 "Uncharacterized protein"... 132 4.1e-13 2
UNIPROTKB|I3LFQ0 - symbol:HNRNPH3 "Uncharacterized protei... 181 5.0e-13 1
UNIPROTKB|I3LLW0 - symbol:RBM12 "Uncharacterized protein"... 132 5.4e-13 2
UNIPROTKB|F1MND5 - symbol:RBM12 "Uncharacterized protein"... 132 6.8e-13 2
MGI|MGI:1922960 - symbol:Rbm12 "RNA binding motif protein... 129 2.5e-12 2
UNIPROTKB|D4A116 - symbol:Rbm12 "Protein Rbm12" species:1... 129 3.3e-12 2
RGD|1594333 - symbol:Rbm12 "RNA binding motif protein 12"... 129 3.5e-12 2
UNIPROTKB|H0YB39 - symbol:HNRNPH1 "Heterogeneous nuclear ... 140 1.5e-11 2
UNIPROTKB|F1NWS6 - symbol:GRSF1 "Uncharacterized protein"... 187 1.8e-11 1
UNIPROTKB|D6RDL0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 164 3.3e-11 1
UNIPROTKB|E1BB17 - symbol:HNRNPH3 "Uncharacterized protei... 181 5.0e-11 1
UNIPROTKB|F1P8D3 - symbol:HNRNPH3 "Uncharacterized protei... 181 5.0e-11 1
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0023441 [details] [associations]
symbol:fus "fusilli" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS;NAS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE013599 GO:GO:0005634
GO:GO:0007173 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043484 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K14947 HSSP:P55795 EMBL:AF321979
EMBL:BT025963 EMBL:BT003299 EMBL:BT023793 EMBL:AY052064
RefSeq:NP_524691.1 RefSeq:NP_725479.1 RefSeq:NP_725480.1
RefSeq:NP_725481.1 RefSeq:NP_725482.1 RefSeq:NP_725483.1
UniGene:Dm.7727 ProteinModelPortal:Q9BJZ5 SMR:Q9BJZ5
MINT:MINT-1023688 STRING:Q9BJZ5 PRIDE:Q9BJZ5
EnsemblMetazoa:FBtr0087343 EnsemblMetazoa:FBtr0087344
EnsemblMetazoa:FBtr0087346 GeneID:44095 KEGG:dme:Dmel_CG8205
UCSC:CG8205-RD CTD:2521 FlyBase:FBgn0023441 InParanoid:A1ZA30
OMA:KFRYIEV OrthoDB:EOG4866TJ PhylomeDB:Q9BJZ5 ChiTaRS:FUS
GenomeRNAi:44095 NextBio:836730 Bgee:Q9BJZ5 Uniprot:Q9BJZ5
Length = 967
Score = 697 (250.4 bits), Expect = 2.6e-89, Sum P(3) = 2.6e-89
Identities = 136/204 (66%), Positives = 163/204 (79%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCLS GRRNGEA++RF+ QEHRDMALKRHKHHI RYIEV +A+GEDF+ +AGG
Sbjct: 307 GGVALCLSPLGRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASGEDFLAIAGGA 366
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NEAQAFL++GAQVIIRMRGLPY+ TAKQV+DFF G C+V+DG EGVLFVKKPDG+
Sbjct: 367 SNEAQAFLSKGAQVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGR 426
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKXXXXXXX 545
ATGDAFVLF E +A KAL +H+ESIG RYIELFRSTTAEVQQVLN++M+ PK
Sbjct: 427 ATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD-PKNYESGGG 485
Query: 546 XXXXXAQQPMLSHLAQVPVPYLPQ 569
+Q P+++ L + +P LPQ
Sbjct: 486 H----SQPPLIAQLPTMQLPLLPQ 505
Score = 337 (123.7 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 66/95 (69%), Positives = 75/95 (78%)
Query: 59 KVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMI 118
+ +VEHIL FL +FA +I+YQGVHMV N+QGQPSGEAFIQMD E SA L AQ RHN M+
Sbjct: 556 EAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCAQRRHNHYMM 615
Query: 119 FGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAISP 153
FGKK RYIEVFQCSG+DMN+VLNG L SP P
Sbjct: 616 FGKKYRYIEVFQCSGDDMNMVLNGGL--ASPVAQP 648
Score = 138 (53.6 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF NV G GV P G+ G+A + F +E
Sbjct: 280 IVRARGLPWQSSDQDIAKFFRG-----LNVAKG--GVALCLSPLGRRNGEALIRFVCQEH 332
Query: 500 ADKALSKHKESIGIRYIELFRST 522
D AL +HK IG RYIE++R++
Sbjct: 333 RDMALKRHKHHIGTRYIEVYRAS 355
Score = 118 (46.6 bits), Expect = 2.6e-89, Sum P(3) = 2.6e-89
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 562 VPVPYLP---QHIITSGTRKDCIRLRGLPYEAL 591
VP P LP QH+ITSGT K+CIRLRGLPYEA+
Sbjct: 526 VPPPALPLPTQHLITSGTTKNCIRLRGLPYEAM 558
Score = 110 (43.8 bits), Expect = 2.4e-16, Sum P(4) = 2.4e-16
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 430 QAFLTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATG 488
Q +T G + IR+RGLPYE + ++ F + + + +++ +GV V G+ +G
Sbjct: 536 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLD---DFAKHII--YQGVHMVINAQGQPSG 590
Query: 489 DAFVLFEKEEEADKALSK---HKESIG--IRYIELFRSTTAEVQQVLNKTMELP 537
+AF+ + EE A + H G RYIE+F+ + ++ VLN + P
Sbjct: 591 EAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNGGLASP 644
Score = 109 (43.4 bits), Expect = 2.6e-89, Sum P(3) = 2.6e-89
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 1 MKVPQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKVLITSQ 49
M+VP++ ++AT G G+ LGSDE+EIILL++V+++ +++ T Q
Sbjct: 1 MQVPEHVVSLYIATCGQNGSGLGSDEKEIILLVFVLLEVSTGQIVGTKQ 49
Score = 101 (40.6 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
Identities = 44/153 (28%), Positives = 70/153 (45%)
Query: 279 PQFQLPINMNT-AHLLQPMNTPFFFNM-PRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGN 336
P QLP+ AH L N+ P PV P LP P L T T N
Sbjct: 496 PTMQLPLLPQVGAHSLSHSLGASPANLCP--PVPPPALP-LPTQHL------ITSGTTKN 546
Query: 337 PVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRF-IDQEHRDMA 395
+ L L + +L+ + + + + GV + ++A G+ +GEA ++ +++ R A
Sbjct: 547 CIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESARLCA 606
Query: 396 LKRHKHHI--DK--RYIEVTKANGEDFINVAGG 424
+RH H++ K RYIEV + +G+D V G
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLNG 639
Score = 84 (34.6 bits), Expect = 3.3e-17, Sum P(4) = 3.3e-17
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
N+ GV + + G+ +GEA I+ + +A + RH ++ G RYIEV++ SGE
Sbjct: 303 NVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMALK-RHKHHI--GT--RYIEVYRASGE 357
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G +S + ++ LP+ +
Sbjct: 358 DFLAIAGGASNEAQAFLSKGAQVIIRMRGLPYDA 391
Score = 83 (34.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+GV V G+ +G+AF+ +E A A RH ++ G QRYIE+F+ + ++
Sbjct: 415 EGVLFVKKPDGRATGDAFVLFANETDAPKALG-RHRESI--G--QRYIELFRSTTAEVQQ 469
Query: 139 VLNGVLPPTSPAISPVGKTLLSP--GMLPHSSQPLYPQ 174
VLN + P + G P LP PL PQ
Sbjct: 470 VLNRSMDPKN--YESGGGHSQPPLIAQLPTMQLPLLPQ 505
Score = 77 (32.2 bits), Expect = 3.3e-17, Sum P(4) = 3.3e-17
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA 413
G GV GR G+A V F ++ AL RH+ I +RYIE+ ++
Sbjct: 413 GNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRS 462
Score = 53 (23.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 569 QHIITSGTRKDCIRLRGLPYEALCI-LMDIFFVG 601
Q ++ G + IR+RGLPY+A ++D F G
Sbjct: 371 QAFLSKGAQV-IIRMRGLPYDATAKQVLDFFTTG 403
Score = 40 (19.1 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 198 LAQAQYAKSQQDNLMLMNQIAAQQMAA 224
LAQ Q Q +L++ Q AA +AA
Sbjct: 797 LAQQQAQFIAQQSLLVRQQAAAAALAA 823
>ZFIN|ZDB-GENE-030131-9824 [details] [associations]
symbol:esrp2 "epithelial splicing regulatory
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0043484 "regulation of RNA
splicing" evidence=ISS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-9824 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 eggNOG:NOG262593 HOGENOM:HOG000112401 KO:K14947
OrthoDB:EOG42RD72 HSSP:Q9Z2X1 CTD:80004 EMBL:BC045439 EMBL:BC065688
IPI:IPI00488983 IPI:IPI00769676 RefSeq:NP_954966.1 UniGene:Dr.200
ProteinModelPortal:Q7ZVR8 SMR:Q7ZVR8 STRING:Q7ZVR8 PRIDE:Q7ZVR8
GeneID:572992 KEGG:dre:572992 InParanoid:Q7ZVR8 NextBio:20891026
Uniprot:Q7ZVR8
Length = 736
Score = 610 (219.8 bits), Expect = 2.6e-72, Sum P(3) = 2.6e-72
Identities = 133/225 (59%), Positives = 153/225 (68%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRFI+ EHRDMAL RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 252 GGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ Q+IIRMRGLP+ T + V+ F G E C V DG EG+LFVK PDG+
Sbjct: 312 SNEVAQFLSKENQMIIRMRGLPFTATPQDVLGFL--GPE--CPVTDGTEGLLFVKYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKXXXXXXX 545
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ M P
Sbjct: 368 PTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTP------LI 421
Query: 546 XXXXXAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
PM+S VPV P I T TR DCIRLRGLPY A
Sbjct: 422 STLPPPPPPMVS----VPVLATPPFITTGNTR-DCIRLRGLPYTA 461
Score = 219 (82.2 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 55/122 (45%), Positives = 71/122 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEF+GE +I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 463 IEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K RY+EVFQCS E+M+ VL +G+ PP P +SP +P MLP +
Sbjct: 519 KDRYVEVFQCSTEEMSFVLMGGTLNRSGLSPPPCKLPCLSPPTYAAFPAAPAMLP-TEAA 577
Query: 171 LY 172
LY
Sbjct: 578 LY 579
Score = 139 (54.0 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V F
Sbjct: 222 SETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVRFIN 274
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E D AL +HK +G RYIE++++T E ++ T
Sbjct: 275 SEHRDMALDRHKHHMGSRYIEVYKATGEEFLKIAGGT 311
Score = 129 (50.5 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 432 FLTRG-AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDA 490
F+T G + IR+RGLPY + +++F G E++ ++ GV V G+ +GDA
Sbjct: 442 FITTGNTRDCIRLRGLPYTAAIEDILEFM--G-EHTIDIKP--HGVHMVLNQQGRPSGDA 496
Query: 491 FVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
F+ + + A K HK+ + RY+E+F+ +T E+ VL
Sbjct: 497 FIQMKSADRAFMVAQKCHKKMMKDRYVEVFQCSTEEMSFVL 537
Score = 109 (43.4 bits), Expect = 2.6e-72, Sum P(3) = 2.6e-72
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
VFF ATAG G LGSDE+E+ILL++ I+D + NKV
Sbjct: 10 VFFGATAGANGGKLGSDERELILLVWQIVDLHENKV 45
Score = 104 (41.7 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA ++ ++SEH +A RH +M G RYIEV++ +G
Sbjct: 248 NIAKGGVALCLNAQGRRNGEALVRFINSEHRD-MALD-RHKHHM--GS--RYIEVYKATG 301
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + ++ LP ++ P
Sbjct: 302 EEFLKIAGGTSNEVAQFLSKENQMIIRMRGLPFTATP 338
Score = 92 (37.4 bits), Expect = 2.3e-16, Sum P(4) = 2.3e-16
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ +L FLG E +G+ V G+P+G+AF+ E A A + +H + I GK
Sbjct: 339 QDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALK-KHKQ--ILGK 395
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLP-PTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQ 178
RYIE+F+ + ++ VLN + P + P ++S +L ++ P NT+
Sbjct: 396 --RYIELFRSTAAEVQQVLNRYMSTPLISTLPPPPPPMVSVPVL--ATPPFITTGNTR 449
Score = 84 (34.6 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RM+GLPY K ++ FF+ G + + VL + G+ +G+A V F E+
Sbjct: 660 LVRMQGLPYNAGVKDILSFFQ-GYQLQA------DSVLVLYNWSGQRSGEALVTFPSEKA 712
Query: 500 ADKALSK 506
A +A+++
Sbjct: 713 ARRAVAE 719
Score = 82 (33.9 bits), Expect = 4.8e-25, Sum P(3) = 4.8e-25
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 262 PTNLPALPAVPTSGGYFPQFQLPINMN-TAHLLQPMNTPF---FFNMPRMPVTPQVLPKF 317
PT+ PA P Y PQ + +NM+ T + P +P +F P V V +
Sbjct: 593 PTHSPA----PAFAYYSPQLYMNMNMSYTTYYPSPPVSPSTVSYFAAPPGSVAAAVAAQ- 647
Query: 318 PVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGR 377
P TP + P PG V + L N + +L+ GY+ L V + + G+
Sbjct: 648 P------TPAILP-PQPGALVRMQGLPYNAGVKDILSFFQGYQ--LQADSVLVLYNWSGQ 698
Query: 378 RNGEAIVRF 386
R+GEA+V F
Sbjct: 699 RSGEALVTF 707
Score = 77 (32.2 bits), Expect = 3.6e-12, Sum P(4) = 3.6e-12
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 296 MNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNT 355
M+TP +P P P V PV TP T + + L L + +L
Sbjct: 416 MSTPLISTLPPPP-PPMV--SVPVLA---TPPFITTGNTRDCIRLRGLPYTAAIEDILEF 469
Query: 356 IPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDM-ALKRHKHHIDKRYIEVTKAN 414
+ + + GV + L+ GR +G+A ++ + M A K HK + RY+EV + +
Sbjct: 470 MGEHTIDIKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMMKDRYVEVFQCS 529
Query: 415 GEDFINVA-GGNNNEA 429
E+ V GG N +
Sbjct: 530 TEEMSFVLMGGTLNRS 545
Score = 59 (25.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSA 105
V+ IL F + + V ++YN GQ SGEA + SE +A
Sbjct: 672 VKDILSFFQGY--QLQADSVLVLYNWSGQRSGEALVTFPSEKAA 713
Score = 43 (20.2 bits), Expect = 2.6e-72, Sum P(3) = 2.6e-72
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 581 IRLRGLPYEALCILMDI--FFVGQQ 603
+R++GLPY A + DI FF G Q
Sbjct: 661 VRMQGLPYNAG--VKDILSFFQGYQ 683
>UNIPROTKB|F1RY52 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 OMA:VAAMTEC EMBL:CU468309
Ensembl:ENSSSCT00000006690 Uniprot:F1RY52
Length = 711
Score = 543 (196.2 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 106/172 (61%), Positives = 129/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 283 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 342
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF G C + G+EG+LFV PDG+
Sbjct: 343 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF--GQH--CPITGGKEGILFVTYPDGR 398
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 399 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 450
Score = 256 (95.2 bits), Expect = 3.1e-25, Sum P(3) = 3.1e-25
Identities = 59/129 (45%), Positives = 79/129 (61%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 488 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 544 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 603
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 604 -QPSVLLNP 611
Score = 177 (67.4 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 385 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 444
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+T + IR+RGLPY T + ++DF G E S +
Sbjct: 445 RFSSAPLIPLPTPPIIPVLPQQFVTPTNVRDCIRLRGLPYAATIEDILDFL--G-EFSTD 501
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 502 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 559
Query: 528 QVL 530
VL
Sbjct: 560 FVL 562
Score = 135 (52.6 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 256 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 308
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 309 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 368
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 369 ADEV-VAFFGQHCPITGG 385
Score = 107 (42.7 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 279 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 333
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 334 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 367
Score = 94 (38.1 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 25 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 65
Score = 93 (37.8 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ +T +DCIRLRGLPY A + DI F+G+
Sbjct: 460 IPVLPQQFVTPTNVRDCIRLRGLPYAAT--IEDILDFLGE 497
Score = 92 (37.4 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E A A LR +++++ GK RYIE+F+ + ++
Sbjct: 387 EGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK--RYIELFRSTAAEVQQ 441
Query: 139 VLNG-----VLP-PTSPAISPVGKTLLSP 161
VLN ++P PT P I + + ++P
Sbjct: 442 VLNRFSSAPLIPLPTPPIIPVLPQQFVTP 470
Score = 72 (30.4 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 586 SYTFPA--PAA-VIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSP 642
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 643 NSLGYFPTAANLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 687
Score = 57 (25.1 bits), Expect = 3.1e-25, Sum P(3) = 3.1e-25
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 664 VVRMQGLAYNTGVKEILNFFQ 684
>MGI|MGI:1917326 [details] [associations]
symbol:Esrp1 "epithelial splicing regulatory protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917326 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:CH466538 SUPFAM:SSF53098 GO:GO:0043484
EMBL:AL772170 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K14947 EMBL:AK042164 EMBL:AK140848
EMBL:AK166376 EMBL:BC031468 EMBL:BC059280 IPI:IPI00377935
IPI:IPI00649037 IPI:IPI00828247 IPI:IPI00828788 IPI:IPI01027663
RefSeq:NP_918944.2 UniGene:Mm.387719 HSSP:Q9Z2X1
ProteinModelPortal:Q3US41 SMR:Q3US41 STRING:Q3US41 PaxDb:Q3US41
PRIDE:Q3US41 Ensembl:ENSMUST00000043781 Ensembl:ENSMUST00000108310
Ensembl:ENSMUST00000108313 Ensembl:ENSMUST00000147342
Ensembl:ENSMUST00000155519 GeneID:207920 KEGG:mmu:207920
UCSC:uc008rzk.2 UCSC:uc008rzl.2 UCSC:uc008rzm.2 UCSC:uc008rzn.1
InParanoid:Q3US41 NextBio:372085 Bgee:Q3US41 CleanEx:MM_RBM35A
Genevestigator:Q3US41 Uniprot:Q3US41
Length = 680
Score = 548 (198.0 bits), Expect = 7.4e-69, Sum P(3) = 7.4e-69
Identities = 107/172 (62%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 252 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 311
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G C + G+EG+LFV PDG+
Sbjct: 312 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF--GQH--CPITGGKEGILFVTYPDGR 367
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ P
Sbjct: 368 PTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFSSAP 419
Score = 254 (94.5 bits), Expect = 4.2e-25, Sum P(3) = 4.2e-25
Identities = 59/129 (45%), Positives = 79/129 (61%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 457 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 512
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 573 -QPSLLLNP 580
Score = 172 (65.6 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 54/183 (29%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 354 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLN 413
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E S +
Sbjct: 414 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL--G-EFSTD 470
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 471 IRT--HGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 528
Query: 528 QVL 530
VL
Sbjct: 529 FVL 531
Score = 136 (52.9 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 225 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 277
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 278 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 337
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 338 AEEV-VAFFGQHCPITGG 354
Score = 107 (42.7 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 248 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 302
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 303 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 336
Score = 94 (38.1 bits), Expect = 7.4e-69, Sum P(3) = 7.4e-69
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 92 (37.4 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F G+ +G+ V G+P+G+AF+ E A A LR ++ ++ GK
Sbjct: 339 EEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKELL-GK 395
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV 154
RYIE+F+ + ++ VLN ++P +P I PV
Sbjct: 396 --RYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPV 431
Score = 87 (35.7 bits), Expect = 7.4e-69, Sum P(3) = 7.4e-69
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 429 IPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILDFLGE 466
Score = 74 (31.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 32/103 (31%), Positives = 40/103 (38%)
Query: 266 PALPAV-PTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTPQVLPKFP 318
PA AV PT Y P L P + + P T F N P P +P L FP
Sbjct: 559 PAPTAVIPTEAAIYQPSLLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFP 618
Query: 319 VH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L+ P P PG V + L N + +LN GY+
Sbjct: 619 TAANLSSVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 656
Score = 57 (25.1 bits), Expect = 4.2e-25, Sum P(3) = 4.2e-25
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 633 VVRMQGLAYNTGVKEILNFFQ 653
>RGD|1560481 [details] [associations]
symbol:Esrp1 "epithelial splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484
"regulation of RNA splicing" evidence=IEA;ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1560481
GO:GO:0005886 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
EMBL:AABR03040708 EMBL:AABR03042124 EMBL:BC166735 IPI:IPI00929919
IPI:IPI00948834 RefSeq:NP_001121036.2 UniGene:Rn.161971
Ensembl:ENSRNOT00000067129 GeneID:500409 KEGG:rno:500409
UCSC:RGD:1560481 NextBio:706112 ArrayExpress:B2RYD2
Genevestigator:B2RYD2 Uniprot:B2RYD2
Length = 677
Score = 545 (196.9 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 106/172 (61%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF--GQH--CPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 420
Score = 258 (95.9 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 59/127 (46%), Positives = 79/127 (62%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQ 174
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y Q
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPP--PCLSPPSYTFPAPAAVIPTEAAIY-Q 570
Query: 175 HNTQINP 181
+ +NP
Sbjct: 571 PSLLLNP 577
Score = 170 (64.9 bits), Expect = 9.5e-21, Sum P(3) = 9.5e-21
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + +R+RGLPY T + ++DF G E S +
Sbjct: 415 RFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFL--G-EFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IRT--HGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 136 (52.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 278
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 279 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 338
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 339 AEEV-VAFFGQHCPITGG 355
Score = 107 (42.7 bits), Expect = 9.5e-21, Sum P(3) = 9.5e-21
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 94 (38.1 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 94 (38.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 31/106 (29%), Positives = 56/106 (52%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F G+ +G+ V G+P+G+AF+ E A A LR +++++ GK
Sbjct: 340 EEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK 396
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----VLP-PTSPAISPVGKTLLSP 161
RYIE+F+ + ++ VLN ++P PT+P I + + + P
Sbjct: 397 --RYIELFRSTAAEVQQVLNRFSSAPLIPLPTAPIIPVLPQQFVPP 440
Score = 87 (35.7 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 554 PMLSHLAQVPV-PYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P++ L P+ P LPQ + +DC+RLRGLPY A + DI F+G+
Sbjct: 420 PLIP-LPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAAT--IEDILDFLGE 467
Score = 75 (31.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 552 SYTFPA--PAA-VIPTEAAIYQPSLLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSP 608
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 609 NSLGYFPTAANLSSVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 653
Score = 57 (25.1 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 630 VVRMQGLAYNTGVKEILNFFQ 650
>UNIPROTKB|F1LP81 [details] [associations]
symbol:Esrp1 "Epithelial-splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1560481
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 IPI:IPI00558323
Ensembl:ENSRNOT00000010846 ArrayExpress:F1LP81 Uniprot:F1LP81
Length = 681
Score = 545 (196.9 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 106/172 (61%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF--GQH--CPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 420
Score = 256 (95.2 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 59/129 (45%), Positives = 79/129 (61%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSLLLNP 581
Score = 170 (64.9 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + +R+RGLPY T + ++DF G E S +
Sbjct: 415 RFSSAPLIPLPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFL--G-EFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IRT--HGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 136 (52.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 278
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 279 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 338
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 339 AEEV-VAFFGQHCPITGG 355
Score = 107 (42.7 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 94 (38.1 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 94 (38.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 31/106 (29%), Positives = 56/106 (52%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F G+ +G+ V G+P+G+AF+ E A A LR +++++ GK
Sbjct: 340 EEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK 396
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----VLP-PTSPAISPVGKTLLSP 161
RYIE+F+ + ++ VLN ++P PT+P I + + + P
Sbjct: 397 --RYIELFRSTAAEVQQVLNRFSSAPLIPLPTAPIIPVLPQQFVPP 440
Score = 87 (35.7 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 554 PMLSHLAQVPV-PYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P++ L P+ P LPQ + +DC+RLRGLPY A + DI F+G+
Sbjct: 420 PLIP-LPTAPIIPVLPQQFVPPTNVRDCVRLRGLPYAAT--IEDILDFLGE 467
Score = 75 (31.5 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 556 SYTFPA--PAA-VIPTEAAIYQPSLLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSP 612
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 613 NSLGYFPTAANLSSVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 657
Score = 57 (25.1 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 634 VVRMQGLAYNTGVKEILNFFQ 654
>ZFIN|ZDB-GENE-070112-1732 [details] [associations]
symbol:esrp1 "epithelial splicing regulatory
protein 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070112-1732 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 EMBL:BC129044 EMBL:BC134218 IPI:IPI00829273
RefSeq:NP_001074045.1 UniGene:Dr.13001 ProteinModelPortal:A1L1G1
SMR:A1L1G1 STRING:A1L1G1 Ensembl:ENSDART00000103431 GeneID:560190
KEGG:dre:560190 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 InParanoid:A4FVM7
KO:K14947 OMA:HIRQVIH OrthoDB:EOG42RD72 NextBio:20883322
Bgee:A1L1G1 Uniprot:A1L1G1
Length = 714
Score = 622 (224.0 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 128/225 (56%), Positives = 157/225 (69%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFESEEHRDLALQRHKHHMGGRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE +FL+R Q+I+RMRGLP+ TA+QV+ FF +C V DG EG+LFV+ PDG+
Sbjct: 313 SNEVASFLSRENQIIVRMRGLPFNATAEQVLQFFSP----ACPVTDGSEGILFVRFPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKXXXXXXX 545
TGDAFVLF EE A AL KHK+ +G RYIELF+ST AEVQQVLNK P
Sbjct: 369 PTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFKSTAAEVQQVLNKYSSAP-------- 420
Query: 546 XXXXXAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA 590
A P+LS +A P ++PQ G R DC+RLRGLPY+A
Sbjct: 421 -LIPVAPSPILSVVA--PPTFVPQTAAVPGVR-DCVRLRGLPYDA 461
Score = 236 (88.1 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 72/192 (37%), Positives = 101/192 (52%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL FLGE+ ++I GVHMV N QG+PSGEAFIQM S A+LAAQ H R+M
Sbjct: 463 IQDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSM---- 518
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPP---TSPAIS-PVGKTLLSPG-MLPHSSQ 169
K+RY+EVF CS +++N+VL +G+ PP + P+ + P G +L G +LP +
Sbjct: 519 KERYVEVFACSAQEVNIVLMGGTLNRSGLSPPPCLSPPSYTFPHGAPVLPAGAVLPAGA- 577
Query: 170 PLYPQHNTQINPGLSHLDPLVNVHLTQALAQAQYAKSQQDNLMLMNQIAAQQMAALNKPH 229
+ P + I P L P H T Y S N + MN + P
Sbjct: 578 -VLPVESAGIYPSQFLLGPRPPPHTTTF-----YPAS---NTLYMNY-TTYYPSPPGSPS 627
Query: 230 NMAL--NGHTPT 239
N++ GHTP+
Sbjct: 628 NISYFPTGHTPS 639
Score = 138 (53.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR RGLP++ + + + FF N+ G G G+ G+A V FE EE
Sbjct: 226 VIRARGLPWQSSDQDIARFFRG-----LNIAKG--GAALCLNAQGRRNGEALVRFESEEH 278
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 279 RDLALQRHKHHMGGRYIEVYKATGEDFLKIAGGT 312
Score = 136 (52.9 bits), Expect = 8.6e-17, Sum P(3) = 8.6e-17
Identities = 55/186 (29%), Positives = 77/186 (41%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +EH ALK+HK + KRYIE+ K+ + V
Sbjct: 355 GSEGILFVRFPDGRPTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFKSTAAEVQQVL- 413
Query: 424 GNNNEAQAFLTRGA-----QVIIRMRGLPYECTAKQVIDFFEA-GTENSCNVMD-----G 472
N + A L A V+ +P V D G ++ D G
Sbjct: 414 --NKYSSAPLIPVAPSPILSVVAPPTFVPQTAAVPGVRDCVRLRGLPYDASIQDILVFLG 471
Query: 473 E-------EGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTA 524
E GV V G+ +G+AF+ E A A + HK S+ RY+E+F +
Sbjct: 472 EYGADIKTHGVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSMKERYVEVFACSAQ 531
Query: 525 EVQQVL 530
EV VL
Sbjct: 532 EVNIVL 537
Score = 109 (43.4 bits), Expect = 8.6e-17, Sum P(3) = 8.6e-17
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ +SE LA Q RH +M G RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFESEEHRDLALQ-RHKHHM--GG--RYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVASFLSRENQIIVRMRGLPFNA 337
Score = 99 (39.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 63 EHILEFLGEFASNIV--YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFG 120
E +L+F A + +G+ V G+P+G+AF+ E A A L+ +++M+ G
Sbjct: 340 EQVLQFFSP-ACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNA--LKKHKDML-G 395
Query: 121 KKQRYIEVFQCSGEDMNLVLNGVLP-PTSP-AISPVGKTLLSPGMLPHSS 168
K RYIE+F+ + ++ VLN P P A SP+ + P +P ++
Sbjct: 396 K--RYIELFKSTAAEVQQVLNKYSSAPLIPVAPSPILSVVAPPTFVPQTA 443
Score = 94 (38.1 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 290 AHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWL 349
A + Q +N + + P +PV P + V P +P + V L L + +
Sbjct: 407 AEVQQVLNK--YSSAPLIPVAPSPILSV-VAPPTFVPQTAAVPGVRDCVRLRGLPYDASI 463
Query: 350 SLLLNTIPGYEQVLGLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYI 408
+L + Y + GV + L+ GR +GEA ++ E +A +R HK + +RY+
Sbjct: 464 QDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSMKERYV 523
Query: 409 EVTKANGEDFINVA--GGNNNEA 429
EV + ++ +N+ GG N +
Sbjct: 524 EVFACSAQE-VNIVLMGGTLNRS 545
Score = 91 (37.1 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNK 43
P Y + F T+G G+ LGSDE+EI+ L++ ++D K
Sbjct: 5 PDYLVLLFTTTSGASGDKLGSDEKEIVQLVWQVVDLATKK 44
Score = 39 (18.8 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 263 TNLPALPAVPTSGGYFPQFQLP 284
T P+ P P++ YFP P
Sbjct: 617 TYYPSPPGSPSNISYFPTGHTP 638
>UNIPROTKB|F1MVN3 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484 CTD:54845
GeneTree:ENSGT00620000087828 KO:K14947 OMA:VAAMTEC
EMBL:DAAA02039465 IPI:IPI00913393 RefSeq:NP_001179931.1
UniGene:Bt.62027 Ensembl:ENSBTAT00000037192 GeneID:538640
KEGG:bta:538640 NextBio:20877490 Uniprot:F1MVN3
Length = 677
Score = 544 (196.6 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 106/172 (61%), Positives = 129/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF G C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF--GQH--CPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 420
Score = 258 (95.9 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 59/127 (46%), Positives = 79/127 (62%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 458 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQ 174
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y Q
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPP--PCLSPPSYTFPAPAAVIPTEAAIY-Q 570
Query: 175 HNTQINP 181
+ +NP
Sbjct: 571 PSVLLNP 577
Score = 170 (64.9 bits), Expect = 7.5e-21, Sum P(3) = 7.5e-21
Identities = 54/183 (29%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E S +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCIRLRGLPYAATIEDILDFL--G-EFSTD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 134 (52.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 278
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 279 RDLALQRHKHHMGSRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 338
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 339 ADEV-VAFFGQHCPITGG 355
Score = 108 (43.1 bits), Expect = 7.5e-21, Sum P(3) = 7.5e-21
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GS--RYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 94 (38.1 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL++ ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKV 45
Score = 91 (37.1 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E A A LR +++++ GK RYIE+F+ + ++
Sbjct: 357 EGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK--RYIELFRSTAAEVQQ 411
Query: 139 VLNG-----VLPPTSPAISPV 154
VLN ++P +P I PV
Sbjct: 412 VLNRFSSAPLIPLPTPPIIPV 432
Score = 87 (35.7 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 430 IPVLPQQFVPPTNIRDCIRLRGLPYAAT--IEDILDFLGE 467
Score = 72 (30.4 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 552 SYTFPA--PAA-VIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSP 608
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 609 NSLGYFPTAANLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 653
Score = 57 (25.1 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 630 VVRMQGLAYNTGVKEILNFFQ 650
>UNIPROTKB|Q6DEZ7 [details] [associations]
symbol:esrp1 "Epithelial splicing regulatory protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043484 "regulation of RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
GO:GO:0000166 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
SUPFAM:SSF53098 GO:GO:0043484 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
OrthoDB:EOG42RD72 HSSP:P55795 EMBL:BC076946 RefSeq:NP_001005057.1
UniGene:Str.5962 ProteinModelPortal:Q6DEZ7 SMR:Q6DEZ7 PRIDE:Q6DEZ7
Ensembl:ENSXETT00000032125 GeneID:448608 KEGG:xtr:448608
Xenbase:XB-GENE-985138 InParanoid:Q6DEZ7 Bgee:Q6DEZ7 Uniprot:Q6DEZ7
Length = 687
Score = 546 (197.3 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 107/172 (62%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 254 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G + C V G+EG+LFV PD +
Sbjct: 314 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF--GQQ--CPVTGGKEGILFVTYPDNR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ P
Sbjct: 370 PTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYSSAP 421
Score = 260 (96.6 bits), Expect = 9.1e-26, Sum P(4) = 9.1e-26
Identities = 62/130 (47%), Positives = 79/130 (60%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG++FIQM S AYLAAQ H + M
Sbjct: 459 IEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTL-LSPGMLPHSSQPL 171
K RY+EVFQCS E+MN VL NG+ PP P +SP T ++P + L
Sbjct: 515 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAQAAVIPTEAAAL 574
Query: 172 YPQHNTQINP 181
Y Q + +NP
Sbjct: 575 Y-QPSLLLNP 583
Score = 163 (62.4 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 52/183 (28%), Positives = 87/183 (47%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ R G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 356 GKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLN 415
Query: 424 GNNNEA--------------QAFLTR-GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + +++F G E S +
Sbjct: 416 RYSSAPLIPLPTPPIIPVLPQPFIPPVNVRDCIRLRGLPYAATIEDILEFL--G-EFSAD 472
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GD+F+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 473 IRT--HGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMN 530
Query: 528 QVL 530
VL
Sbjct: 531 FVL 533
Score = 134 (52.2 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IIR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 227 IIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 279
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 280 RDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Score = 108 (43.1 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 250 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GN--RYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 305 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Score = 93 (37.8 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G+ LGSDE+E+I L++ +I+ KV
Sbjct: 6 PDYLVVLFTTTAGANGSKLGSDEKEVIQLLWKVINLANKKV 46
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E +L F G+ +G+ V +P+G+AF+ E A A + +H + GK
Sbjct: 341 EEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALK-KHKE--LLGK 397
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQ 178
RYIE+F+ + ++ VLN ++P I P L +P ++P QP P N +
Sbjct: 398 --RYIELFRSTAAEVQQVLNRY--SSAPLI-P----LPTPPIIPVLPQPFIPPVNVR 445
Score = 85 (35.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ I +DCIRLRGLPY A + DI F+G+
Sbjct: 431 IPVLPQPFIPPVNVRDCIRLRGLPYAAT--IEDILEFLGE 468
Score = 55 (24.4 bits), Expect = 9.1e-26, Sum P(4) = 9.1e-26
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 637 MVRMQGLAYNSGVKEILNFFQ 657
Score = 46 (21.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 581 IRLRGLPYEALCILMDIFFVGQQ 603
+R+RGLP+ A + FF GQQ
Sbjct: 329 VRMRGLPFTATAEEVLAFF-GQQ 350
Score = 40 (19.1 bits), Expect = 9.1e-26, Sum P(4) = 9.1e-26
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 266 PALPAVPTSGGYFP 279
P+ P P+S G+FP
Sbjct: 608 PSPPGSPSSLGFFP 621
>UNIPROTKB|Q7ZY29 [details] [associations]
symbol:esrp1 "Epithelial splicing regulatory protein 1"
species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0043484
"regulation of RNA splicing" evidence=ISS] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
CTD:54845 KO:K14947 EMBL:BC044002 RefSeq:NP_001079524.1
UniGene:Xl.14515 HSSP:P55795 ProteinModelPortal:Q7ZY29 SMR:Q7ZY29
PRIDE:Q7ZY29 GeneID:379211 KEGG:xla:379211 Xenbase:XB-GENE-985143
Uniprot:Q7ZY29
Length = 688
Score = 546 (197.3 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 107/172 (62%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 254 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G + C V G+EG+LFV PD +
Sbjct: 314 SNEVAQFLSKENQVIVRMRGLPFTATAEEVLAFF--GQQ--CPVTGGKEGILFVTYPDNR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ P
Sbjct: 370 PTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLNRYSSAP 421
Score = 260 (96.6 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 62/130 (47%), Positives = 79/130 (60%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG++FIQM S AYLAAQ H + M
Sbjct: 459 IEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTM---- 514
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTL-LSPGMLPHSSQPL 171
K RY+EVFQCS E+MN VL NG+ PP P +SP T ++P + L
Sbjct: 515 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAQAAVIPTEAAAL 574
Query: 172 YPQHNTQINP 181
Y Q + +NP
Sbjct: 575 Y-QPSLLLNP 583
Score = 163 (62.4 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 52/183 (28%), Positives = 87/183 (47%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ R G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 356 GKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRSTAAEVQQVLN 415
Query: 424 GNNNEA--------------QAFLTR-GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + +++F G E S +
Sbjct: 416 RYSSAPLIPLPTPPIIPVLPQPFIPPVNVRDCIRLRGLPYAATIEDILEFL--G-EFSAD 472
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GD+F+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 473 IRT--HGVHMVLNHQGRPSGDSFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQCSAEEMN 530
Query: 528 QVL 530
VL
Sbjct: 531 FVL 533
Score = 134 (52.2 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
IIR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 227 IIRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 279
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
D AL +HK +G RYIE++++T + ++ T
Sbjct: 280 RDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGT 313
Score = 108 (43.1 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 250 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GN--RYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 305 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 338
Score = 93 (37.8 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G+ LGSDE+E+I L++ +I+ KV
Sbjct: 6 PDYLVVLFTTTAGANGSKLGSDEKEVIQLLWKVINLANKKV 46
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E +L F G+ +G+ V +P+G+AF+ E A A + +H + GK
Sbjct: 341 EEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALK-KHKE--LLGK 397
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQ 178
RYIE+F+ + ++ VLN ++P I P L +P ++P QP P N +
Sbjct: 398 --RYIELFRSTAAEVQQVLNRY--SSAPLI-P----LPTPPIIPVLPQPFIPPVNVR 445
Score = 85 (35.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ I +DCIRLRGLPY A + DI F+G+
Sbjct: 431 IPVLPQPFIPPVNVRDCIRLRGLPYAAT--IEDILEFLGE 468
Score = 53 (23.7 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K +++FF+
Sbjct: 638 MVRMQGLAYNSGVKDILNFFQ 658
Score = 46 (21.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 581 IRLRGLPYEALCILMDIFFVGQQ 603
+R+RGLP+ A + FF GQQ
Sbjct: 329 VRMRGLPFTATAEEVLAFF-GQQ 350
Score = 40 (19.1 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 266 PALPAVPTSGGYFP 279
P+ P P+S G+FP
Sbjct: 609 PSPPGSPSSLGFFP 622
>UNIPROTKB|Q6NXG1 [details] [associations]
symbol:ESRP1 "Epithelial splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005886
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GO:GO:0043484 CTD:54845 eggNOG:NOG262593 KO:K14947 EMBL:BX647570
EMBL:AC108860 EMBL:AP005660 EMBL:BC019932 EMBL:BC067098
EMBL:BC099916 EMBL:BC112043 EMBL:AK000178 IPI:IPI00184262
IPI:IPI00654821 IPI:IPI00789651 IPI:IPI00797684 IPI:IPI00889741
RefSeq:NP_001030087.2 RefSeq:NP_001116297.1 RefSeq:NP_001116298.1
RefSeq:NP_001116299.1 RefSeq:NP_060167.2 UniGene:Hs.487471 PDB:2DHA
PDBsum:2DHA ProteinModelPortal:Q6NXG1 SMR:Q6NXG1 STRING:Q6NXG1
PhosphoSite:Q6NXG1 DMDM:124020999 PaxDb:Q6NXG1 PRIDE:Q6NXG1
Ensembl:ENST00000358397 Ensembl:ENST00000423620
Ensembl:ENST00000433389 Ensembl:ENST00000454170 GeneID:54845
KEGG:hsa:54845 UCSC:uc003ygq.4 UCSC:uc003ygr.4 UCSC:uc003ygt.4
UCSC:uc003ygv.3 GeneCards:GC08P095653 HGNC:HGNC:25966 HPA:HPA023719
HPA:HPA023720 MIM:612959 neXtProt:NX_Q6NXG1 PharmGKB:PA164719324
InParanoid:Q6NXG1 OMA:VAAMTEC ChiTaRS:ESRP1
EvolutionaryTrace:Q6NXG1 GenomeRNAi:54845 NextBio:57677
ArrayExpress:Q6NXG1 Bgee:Q6NXG1 CleanEx:HS_RBM35A
Genevestigator:Q6NXG1 Uniprot:Q6NXG1
Length = 681
Score = 545 (196.9 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 106/172 (61%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 253 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 312
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G C + G+EG+LFV PDG+
Sbjct: 313 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF--GQH--CPITGGKEGILFVTYPDGR 368
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 369 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 420
Score = 264 (98.0 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 61/129 (47%), Positives = 80/129 (62%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 458 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 513
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 574 -QPSVILNP 581
Score = 168 (64.2 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 355 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 414
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E + +
Sbjct: 415 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL--G-EFATD 471
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 472 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMN 529
Query: 528 QVL 530
VL
Sbjct: 530 FVL 532
Score = 136 (52.9 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 226 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 278
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 279 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 338
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 339 AEEV-VAFFGQHCPITGG 355
Score = 107 (42.7 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 249 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 303
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 304 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 337
Score = 93 (37.8 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F G+ +G+ V G+P+G+AF+ E A A LR +++++ GK
Sbjct: 340 EEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK 396
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV 154
RYIE+F+ + ++ VLN ++P +P I PV
Sbjct: 397 --RYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPV 432
Score = 92 (37.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
P Y V F TAG G LGSDE+E+ILL + ++D KV
Sbjct: 5 PDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKV 45
Score = 87 (35.7 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 430 IPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILDFLGE 467
Score = 71 (30.1 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 556 SYTFPA--PAA-VIPTEAAIYQPSVILNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSP 612
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 613 NSLGYFPTAANLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 657
Score = 57 (25.1 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 634 VVRMQGLAYNTGVKEILNFFQ 654
>UNIPROTKB|Q5ZLR4 [details] [associations]
symbol:ESRP2 "Epithelial splicing regulatory protein 2"
species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043484
eggNOG:NOG262593 GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401
KO:K14947 HSSP:Q9Z2X1 EMBL:AJ719670 IPI:IPI00574410
RefSeq:NP_001025737.1 UniGene:Gga.9032 ProteinModelPortal:Q5ZLR4
SMR:Q5ZLR4 PRIDE:Q5ZLR4 Ensembl:ENSGALT00000005333 GeneID:415710
KEGG:gga:415710 CTD:80004 InParanoid:Q5ZLR4 OMA:VIKQKYE
OrthoDB:EOG49078K NextBio:20819270 Uniprot:Q5ZLR4
Length = 701
Score = 546 (197.3 bits), Expect = 5.4e-63, Sum P(3) = 5.4e-63
Identities = 109/172 (63%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA+VRF++ E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 254 GGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 313
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVIIRMRGLP+ T + V+ F G E C V G+EG+LFVK PDG+
Sbjct: 314 SNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFL--GPE--CPVTGGKEGLLFVKYPDGR 369
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHKE +G RYIELFRST AEVQQVLN+ M P
Sbjct: 370 PTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTP 421
Score = 280 (103.6 bits), Expect = 5.6e-32, Sum P(4) = 5.6e-32
Identities = 65/124 (52%), Positives = 77/124 (62%)
Query: 467 CNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEV 526
C V G+EG+LFVK PDG+ TGDAFVLF EE A AL KHKE +G RYIELFRST AEV
Sbjct: 351 CPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEV 410
Query: 527 QQVLNKTMELPKXXXXXXXXXXXXAQQPMLSHLAQVPVPYLPQHIITSGTRKDCIRLRGL 586
QQVLN+ M P P++ +P PY I +G+ +DC+RLRGL
Sbjct: 411 QQVLNRYMSTP---------LIPTLPTPIIP---VIPPPYT----IATGSIRDCVRLRGL 454
Query: 587 PYEA 590
PY A
Sbjct: 455 PYTA 458
Score = 223 (83.6 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 52/121 (42%), Positives = 71/121 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
++ IL+F+G+ ++I GVHMV N QG+PSG+AFIQM S A++ AQ H + M
Sbjct: 460 IDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMM---- 515
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGMLPHSSQPLY-P 173
K RY+EVFQCSGE+MN VL +G+ PP P +SP + + LY P
Sbjct: 516 KDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPP--PCLSPPAYAAFQTAAVIPAEAALYQP 573
Query: 174 Q 174
Q
Sbjct: 574 Q 574
Score = 147 (56.8 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 47/172 (27%), Positives = 76/172 (44%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA------ 429
GR G+A V F +E+ ALK+HK + KRYIE+ ++ + V +
Sbjct: 368 GRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLP 427
Query: 430 ----------QAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFV 479
T + +R+RGLPY ++DF T + GV V
Sbjct: 428 TPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILDFMGDATADI-----KPHGVHMV 482
Query: 480 KKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQVL 530
G+ +GDAF+ + ++A K HK+ + RY+E+F+ + E+ VL
Sbjct: 483 LNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVL 534
Score = 142 (55.0 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 434 TRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVL 493
T ++ +IR RGLP++ + + + FF+ N+ G GV G+ G+A V
Sbjct: 221 TVDSETVIRARGLPWQSSDQDIARFFKG-----LNIAKG--GVALCLNAQGRRNGEALVR 273
Query: 494 FEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
F E+ D AL +HK +G RYIE++++T E ++ T
Sbjct: 274 FVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGT 313
Score = 99 (39.9 bits), Expect = 5.6e-32, Sum P(4) = 5.6e-32
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA ++ + LA + RH +M G RYIEV++ +GE
Sbjct: 250 NIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALE-RHKHHM--GS--RYIEVYKATGE 304
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
+ + G + +S + ++ LP ++
Sbjct: 305 EFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTA 338
Score = 94 (38.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 63 EHILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E +L FLG E +G+ V G+P+G+AF+ E A A + +H I GK
Sbjct: 341 EDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALK-KHKE--ILGK 397
Query: 122 KQRYIEVFQCSGEDMNLVLNGVL--P--PTSPA-ISPV 154
RYIE+F+ + ++ VLN + P PT P I PV
Sbjct: 398 --RYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPV 433
Score = 88 (36.0 bits), Expect = 5.4e-63, Sum P(3) = 5.4e-63
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
V F ATAG G LGSDE+E+ILL++ ++D KV
Sbjct: 11 VLFGATAGAYGAKLGSDERELILLVWQVVDLPSKKV 46
Score = 62 (26.9 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GLPY K+++ FF+
Sbjct: 649 LVRMQGLPYNTGMKEILSFFQ 669
Score = 50 (22.7 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 27/103 (26%), Positives = 39/103 (37%)
Query: 261 IPT-NLP-ALPAVPTSGGYFPQFQLPINMN-TAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
+PT P A A P + Y+P + MN TA+ P +P P
Sbjct: 577 LPTARTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYLAAPPGAVAAAAT 636
Query: 318 PVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
H TP +P PG V + L N + +L+ GY+
Sbjct: 637 ATH----TPL---LPQPGALVRMQGLPYNTGMKEILSFFQGYQ 672
Score = 46 (21.3 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 310 TPQVLPKFPVHQLNQTPTVYTIPTPG--NPVALCPLVQNIWLSLLLNTIPGYEQVLGLGG 367
TP ++P P + P YTI T + V L L + +L+ + + G
Sbjct: 420 TP-LIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILDFMGDATADIKPHG 478
Query: 368 VALCLSAFGRRNGEAIVRFIDQEHRDMA 395
V + L+ GR +G+A FI + D A
Sbjct: 479 VHMVLNQQGRPSGDA---FIQMKSADKA 503
Score = 39 (18.8 bits), Expect = 5.4e-63, Sum P(3) = 5.4e-63
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 581 IRLRGLPYEALCILMDIFFVGQQ 603
+R++GLPY + FF G Q
Sbjct: 650 VRMQGLPYNTGMKEILSFFQGYQ 672
Score = 39 (18.8 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 581 IRLRGLPYEA 590
IR+RGLP+ A
Sbjct: 329 IRMRGLPFTA 338
>RGD|1310855 [details] [associations]
symbol:Esrp2 "epithelial splicing regulatory protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA;ISO;ISS]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:1310855 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
eggNOG:NOG262593 HOGENOM:HOG000112401 OrthoDB:EOG49078K
EMBL:BC166804 IPI:IPI00359594 UniGene:Rn.231924
ProteinModelPortal:B2RYJ8 SMR:B2RYJ8 PhosphoSite:B2RYJ8
PRIDE:B2RYJ8 UCSC:RGD:1310855 ArrayExpress:B2RYJ8
Genevestigator:B2RYJ8 Uniprot:B2RYJ8
Length = 716
Score = 498 (180.4 bits), Expect = 4.0e-62, Sum P(3) = 4.0e-62
Identities = 101/172 (58%), Positives = 123/172 (71%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 274 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 333
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+DF G E C V G +G+LFV+ PDG+
Sbjct: 334 SLEVARFLSREDQVILRLRGLPFSAGPADVLDFL--GPE--CPVTGGVDGLLFVRHPDGR 389
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P
Sbjct: 390 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASP 441
Score = 214 (80.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 55/123 (44%), Positives = 71/123 (57%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 477 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVM---- 532
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP SP ++P +
Sbjct: 533 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQASPALIPTETTA 592
Query: 171 LYP 173
LYP
Sbjct: 593 LYP 595
Score = 157 (60.3 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 54/183 (29%), Positives = 85/183 (46%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 376 GVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL- 434
Query: 424 GNNNEAQAFL-TRGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCN 468
N A L T A ++ +R+RGLPY T + ++ F G E + +
Sbjct: 435 -NRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFL--G-EAAAD 490
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+
Sbjct: 491 IRP--HGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEVVPCSTEEMS 548
Query: 528 QVL 530
+VL
Sbjct: 549 RVL 551
Score = 149 (57.5 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 245 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 297
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 333
Score = 110 (43.8 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M G RYIEV++ +GE
Sbjct: 270 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHM--GV--RYIEVYKATGE 324
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 325 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 360
Score = 100 (40.3 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L+FLG E G+ V + G+P+G+AF E A A LR ++ M+ GK
Sbjct: 363 VLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAA--LRRHKGML-GK-- 417
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
RYIE+F+ + ++ VLN A SP+ TL +P +LP
Sbjct: 418 RYIELFRSTAAEVQQVLNRY------AASPLLPTLTAP-LLP 452
Score = 87 (35.7 bits), Expect = 4.0e-62, Sum P(3) = 4.0e-62
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 551 AQQPMLSHLAQ--VPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+L L +P+P+ P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 438 AASPLLPTLTAPLLPIPF-P---LAGGTGRDCVRLRGLPYTAT--IEDILSFLGE 486
Score = 82 (33.9 bits), Expect = 4.0e-62, Sum P(3) = 4.0e-62
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID 38
PQ V F ATAG G LGSDE ++ILL++ +++
Sbjct: 27 PQSLVVLFGATAGALGPDLGSDETDLILLVWQVVE 61
Score = 79 (32.9 bits), Expect = 4.6e-10, Sum P(4) = 4.6e-10
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 312 QVLPKFPVHQLNQTPTVYTIPTP----GNPVALCPLVQNIWLSLLLNTIPGY--EQVLGL 365
QVL ++ L T T +P P G C ++ + + + I + E +
Sbjct: 432 QVLNRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFLGEAAADI 491
Query: 366 G--GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVA 422
GV + L+ GR +G+A ++ + E A +R HK + +RY+EV + E+ V
Sbjct: 492 RPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 551
Query: 423 -GGN 425
GG+
Sbjct: 552 MGGS 555
Score = 52 (23.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA 461
++RM+G+PY K ++ F+A
Sbjct: 664 LVRMQGVPYTAGMKDLLSVFQA 685
Score = 41 (19.5 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 576 TRKD--CIRLRGLPYEA 590
+R+D +RLRGLP+ A
Sbjct: 342 SREDQVILRLRGLPFSA 358
Score = 40 (19.1 bits), Expect = 3.3e-57, Sum P(3) = 3.3e-57
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 581 IRLRGLPYEA-LCILMDIFFVGQ--QDSFVHKVP 611
+R++G+PY A + L+ +F Q D + VP
Sbjct: 665 VRMQGVPYTAGMKDLLSVFQAYQLAPDDYATLVP 698
>UNIPROTKB|G3V8M2 [details] [associations]
symbol:Esrp2 "Epithelial-splicing regulatory protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 SMART:SM00360 RGD:1310855 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098 EMBL:CH473972
GeneTree:ENSGT00620000087828 KO:K14947 CTD:80004 OMA:VIKQKYE
UniGene:Rn.231924 RefSeq:NP_001100893.1 PRIDE:G3V8M2
Ensembl:ENSRNOT00000026873 GeneID:307810 KEGG:rno:307810
NextBio:657907 Uniprot:G3V8M2
Length = 717
Score = 498 (180.4 bits), Expect = 4.3e-62, Sum P(3) = 4.3e-62
Identities = 101/172 (58%), Positives = 123/172 (71%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+DF G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLDFL--GPE--CPVTGGVDGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASP 442
Score = 214 (80.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 55/123 (44%), Positives = 71/123 (57%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP SP ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQASPALIPTETTA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 157 (60.3 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 54/183 (29%), Positives = 85/183 (46%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 377 GVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL- 435
Query: 424 GNNNEAQAFL-TRGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCN 468
N A L T A ++ +R+RGLPY T + ++ F G E + +
Sbjct: 436 -NRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFL--G-EAAAD 491
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+
Sbjct: 492 IRP--HGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEVVPCSTEEMS 549
Query: 528 QVL 530
+VL
Sbjct: 550 RVL 552
Score = 149 (57.5 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + FE
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFEDS 298
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 299 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 110 (43.8 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI GV + N+QG+ +GEA I+ + LA Q RH +M G RYIEV++ +GE
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQ-RHKHHM--GV--RYIEVYKATGE 325
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + G + +S + +L LP S+ P
Sbjct: 326 EFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 100 (40.3 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L+FLG E G+ V + G+P+G+AF E A A LR ++ M+ GK
Sbjct: 364 VLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAA--LRRHKGML-GK-- 418
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
RYIE+F+ + ++ VLN A SP+ TL +P +LP
Sbjct: 419 RYIELFRSTAAEVQQVLNRY------AASPLLPTLTAP-LLP 453
Score = 87 (35.7 bits), Expect = 4.3e-62, Sum P(3) = 4.3e-62
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 551 AQQPMLSHLAQ--VPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+L L +P+P+ P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 439 AASPLLPTLTAPLLPIPF-P---LAGGTGRDCVRLRGLPYTAT--IEDILSFLGE 487
Score = 82 (33.9 bits), Expect = 4.3e-62, Sum P(3) = 4.3e-62
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID 38
PQ V F ATAG G LGSDE ++ILL++ +++
Sbjct: 27 PQSLVVLFGATAGALGPDLGSDETDLILLVWQVVE 61
Score = 79 (32.9 bits), Expect = 4.6e-10, Sum P(4) = 4.6e-10
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 312 QVLPKFPVHQLNQTPTVYTIPTP----GNPVALCPLVQNIWLSLLLNTIPGY--EQVLGL 365
QVL ++ L T T +P P G C ++ + + + I + E +
Sbjct: 433 QVLNRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFLGEAAADI 492
Query: 366 G--GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVA 422
GV + L+ GR +G+A ++ + E A +R HK + +RY+EV + E+ V
Sbjct: 493 RPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVL 552
Query: 423 -GGN 425
GG+
Sbjct: 553 MGGS 556
Score = 52 (23.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA 461
++RM+G+PY K ++ F+A
Sbjct: 665 LVRMQGVPYTAGMKDLLSVFQA 686
Score = 41 (19.5 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 576 TRKD--CIRLRGLPYEA 590
+R+D +RLRGLP+ A
Sbjct: 343 SREDQVILRLRGLPFSA 359
Score = 40 (19.1 bits), Expect = 3.5e-57, Sum P(3) = 3.5e-57
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 581 IRLRGLPYEA-LCILMDIFFVGQ--QDSFVHKVP 611
+R++G+PY A + L+ +F Q D + VP
Sbjct: 666 VRMQGVPYTAGMKDLLSVFQAYQLAPDDYATLVP 699
>MGI|MGI:1924661 [details] [associations]
symbol:Esrp2 "epithelial splicing regulatory protein 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924661 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
HSSP:P55795 CTD:80004 OMA:VIKQKYE OrthoDB:EOG49078K EMBL:BC031444
EMBL:AK020578 IPI:IPI00276878 RefSeq:NP_789808.1 UniGene:Mm.183003
ProteinModelPortal:Q8K0G8 SMR:Q8K0G8 STRING:Q8K0G8
PhosphoSite:Q8K0G8 PaxDb:Q8K0G8 PRIDE:Q8K0G8
Ensembl:ENSMUST00000115979 GeneID:77411 KEGG:mmu:77411
UCSC:uc009nff.1 InParanoid:Q8K0G8 NextBio:346885 Bgee:Q8K0G8
CleanEx:MM_RBM35B Genevestigator:Q8K0G8 Uniprot:Q8K0G8
Length = 717
Score = 498 (180.4 bits), Expect = 4.3e-62, Sum P(3) = 4.3e-62
Identities = 100/172 (58%), Positives = 123/172 (71%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYAASP 442
Score = 212 (79.7 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 54/123 (43%), Positives = 71/123 (57%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGSLSRSGLSPPPCKLPCLSPPTYATFQATPALIPTETTA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 156 (60.0 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 54/183 (29%), Positives = 84/183 (45%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 377 GADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL- 435
Query: 424 GNNNEAQAFL-TRGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCN 468
N A L T A ++ +R+RGLPY T + ++ F G E + +
Sbjct: 436 -NRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFL--G-EAAAD 491
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+
Sbjct: 492 IRP--HGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMMKERYVEVVPCSTEEMS 549
Query: 528 QVL 530
+VL
Sbjct: 550 RVL 552
Score = 142 (55.0 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 438 QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKE 497
+ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVDS 298
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 299 EQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 107 (42.7 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA I+ +DSE LA Q RH +M G RYIEV++ +G
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRD-LALQ-RHKHHM--GV--RYIEVYKATG 324
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + +L LP S+ P
Sbjct: 325 EEFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 95 (38.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ M+ GK
Sbjct: 364 VLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAA--LRRHKGML-GK-- 418
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
RYIE+F+ + ++ VLN A SP+ TL +P +LP
Sbjct: 419 RYIELFRSTAAEVQQVLNRY------AASPLLPTLTAP-LLP 453
Score = 87 (35.7 bits), Expect = 4.3e-62, Sum P(3) = 4.3e-62
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 551 AQQPMLSHLAQ--VPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+L L +P+P+ P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 439 AASPLLPTLTAPLLPIPF-P---LAGGTGRDCVRLRGLPYTAT--IEDILSFLGE 487
Score = 82 (33.9 bits), Expect = 4.3e-62, Sum P(3) = 4.3e-62
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID 38
PQ V F ATAG G LGSDE ++ILL++ +++
Sbjct: 27 PQSLVVLFGATAGALGPDLGSDETDLILLVWQVVE 61
Score = 80 (33.2 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 312 QVLPKFPVHQLNQTPTVYTIPTP----GNPVALCPLVQNIWLSLLLNTIPGY--EQVLGL 365
QVL ++ L T T +P P G C ++ + + + I + E +
Sbjct: 433 QVLNRYAASPLLPTLTAPLLPIPFPLAGGTGRDCVRLRGLPYTATIEDILSFLGEAAADI 492
Query: 366 G--GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVA 422
GV + L+ GR +G+A ++ + E A +R HK + +RY+EV + E+ V
Sbjct: 493 RPHGVHMVLNQQGRPSGDAFIQMMSVERALAAAQRCHKKMMKERYVEVVPCSTEEMSRVL 552
Query: 423 -GGN 425
GG+
Sbjct: 553 MGGS 556
Score = 52 (23.4 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA 461
++RM+G+PY K ++ F+A
Sbjct: 665 LVRMQGVPYTAGMKDLLSVFQA 686
Score = 41 (19.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 576 TRKD--CIRLRGLPYEA 590
+R+D +RLRGLP+ A
Sbjct: 343 SREDQVILRLRGLPFSA 359
Score = 37 (18.1 bits), Expect = 7.3e-57, Sum P(3) = 7.3e-57
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 581 IRLRGLPYEA-LCILMDIF 598
+R++G+PY A + L+ +F
Sbjct: 666 VRMQGVPYTAGMKDLLSVF 684
>UNIPROTKB|F1MSN9 [details] [associations]
symbol:ESRP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 OMA:VIKQKYE EMBL:DAAA02046691
IPI:IPI00699877 UniGene:Bt.94194 Ensembl:ENSBTAT00000005736
NextBio:20869663 Uniprot:F1MSN9
Length = 717
Score = 499 (180.7 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 100/172 (58%), Positives = 123/172 (71%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNRYASSP 442
Score = 212 (79.7 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 54/123 (43%), Positives = 70/123 (56%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A +I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYATFQATPTLIPTETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 156 (60.0 bits), Expect = 6.9e-17, Sum P(4) = 6.9e-17
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A F +E AL+RHK + KRYIE+ ++ + V
Sbjct: 377 GADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVL- 435
Query: 424 GNNNEAQAFL-TRGAQVI--------------IRMRGLPYECTAKQVIDFFEAGTENSCN 468
N + L T A ++ +R+RGLPY T + ++ F G E + +
Sbjct: 436 -NRYASSPLLPTLTAPLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL--G-EAAVD 491
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ E A A + HK+++ RY+E+ +T E+
Sbjct: 492 IRP--HGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYVEVVPCSTEEMS 549
Query: 528 QVL 530
+VL
Sbjct: 550 RVL 552
Score = 135 (52.6 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++ RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVWARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 107 (42.7 bits), Expect = 6.9e-17, Sum P(4) = 6.9e-17
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA I+ +DSE LA Q RH +M G RYIEV++ +G
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRD-LALQ-RHKHHM--GV--RYIEVYKATG 324
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + +L LP S+ P
Sbjct: 325 EEFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ M+ GK
Sbjct: 364 VLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAA--LRRHKGML-GK-- 418
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLP 165
RYIE+F+ + ++ VLN A SP+ TL +P +LP
Sbjct: 419 RYIELFRSTAAEVQQVLNRY------ASSPLLPTLTAP-LLP 453
Score = 89 (36.4 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 551 AQQPMLSHLAQ--VPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+L L +P+P+ P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 439 ASSPLLPTLTAPLLPIPF-P---LAAGTGRDCVRLRGLPYTAT--IEDILSFLGE 487
Score = 78 (32.5 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 32/123 (26%), Positives = 56/123 (45%)
Query: 312 QVLPKFPVHQLNQTPTVYTIPTPGNPVAL-----CPLVQNIWLSLLLNTIPGY--EQVLG 364
QVL ++ L T T +P P P+A C ++ + + + I + E +
Sbjct: 433 QVLNRYASSPLLPTLTAPLLPIPF-PLAAGTGRDCVRLRGLPYTATIEDILSFLGEAAVD 491
Query: 365 LG--GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINV 421
+ GV + L+ GR +G+A ++ E A +R HK + +RY+EV + E+ V
Sbjct: 492 IRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKAMKERYVEVVPCSTEEMSRV 551
Query: 422 AGG 424
G
Sbjct: 552 LMG 554
Score = 74 (31.1 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIID 38
V F ATAG G LGSDE ++ILL++ +++
Sbjct: 32 VLFGATAGALGPDLGSDETDLILLVWQVVE 61
Score = 58 (25.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 34/144 (23%), Positives = 55/144 (38%)
Query: 196 QALAQAQ--YAKSQQDNLMLMNQIAAQQMAALNKPHNMALNGHTPTLIXXXXXXXXXXXX 253
+ALA AQ + K+ ++ + + + ++M+ + + +G +P
Sbjct: 520 RALAAAQRCHKKAMKERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPAYAT 579
Query: 254 XXXKSTTIPTN----------LPA--LPAVPTSGGYFPQFQLPINMN-TAHLLQPMNTPF 300
T IPT LPA +PA PT Y+P + MN TA+ P +P
Sbjct: 580 FQATPTLIPTETAALYPSSALLPAARVPAAPTPVAYYPGPATQLYMNYTAYYPSPPVSPT 639
Query: 301 FFNMPRMPVTPQVLPKFPVHQLNQ 324
P P L P L+Q
Sbjct: 640 TVGYLTTP--PAALASAPTSVLSQ 661
Score = 52 (23.4 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA 461
++RM+G+PY K ++ F+A
Sbjct: 665 LVRMQGVPYTAGMKDLLSVFQA 686
Score = 41 (19.5 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 576 TRKD--CIRLRGLPYEA 590
+R+D +RLRGLP+ A
Sbjct: 343 SREDQVILRLRGLPFSA 359
Score = 38 (18.4 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 581 IRLRGLPYEA-LCILMDIFFVGQ--QDSFVHKVP 611
+R++G+PY A + L+ +F Q D + +P
Sbjct: 666 VRMQGVPYTAGMKDLLSVFQAYQLAPDDYTSLMP 699
>UNIPROTKB|F1PA85 [details] [associations]
symbol:ESRP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GeneTree:ENSGT00620000087828 KO:K14947 CTD:80004 OMA:VIKQKYE
EMBL:AAEX03004121 RefSeq:XP_851504.1 Ensembl:ENSCAFT00000032365
GeneID:489745 KEGG:cfa:489745 Uniprot:F1PA85
Length = 717
Score = 498 (180.4 bits), Expect = 1.4e-61, Sum P(3) = 1.4e-61
Identities = 100/172 (58%), Positives = 123/172 (71%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 275 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G +G+LFV+ PDG+
Sbjct: 335 SLEVARFLSREDQVILRLRGLPFSAGPADVLGFL--GPE--CPVTGGADGLLFVRHPDGR 390
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+ P
Sbjct: 391 PTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLNRYASSP 442
Score = 212 (79.7 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 54/123 (43%), Positives = 71/123 (57%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 478 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 533
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP +P ++P +
Sbjct: 534 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYATFQATPTLIPAETAA 593
Query: 171 LYP 173
LYP
Sbjct: 594 LYP 596
Score = 154 (59.3 bits), Expect = 4.6e-17, Sum P(4) = 4.6e-17
Identities = 56/181 (30%), Positives = 84/181 (46%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G G+ GR G+A F +E AL+RHK + KRYIE+ T A + +N
Sbjct: 377 GADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRSTAAEVQQVLN 436
Query: 421 -VAGGNNNEAQA-------F-LTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
A A F L G + +R+RGLPY T + ++ F G E + ++
Sbjct: 437 RYASSPLLPALTAPLLPIPFPLAAGTGRDCVRLRGLPYTATIEDILSFL--G-EAAADIR 493
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQV 529
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +V
Sbjct: 494 P--HGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRV 551
Query: 530 L 530
L
Sbjct: 552 L 552
Score = 143 (55.4 bits), Expect = 7.1e-14, Sum P(3) = 7.1e-14
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ N+ G GV G+ G+A + F
Sbjct: 245 SETVVRARGLPWQSSDQDVARFFKG-----LNIARG--GVALCLNAQGRRNGEALIRFVD 297
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 298 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 334
Score = 107 (42.7 bits), Expect = 4.6e-17, Sum P(4) = 4.6e-17
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
NI GV + N+QG+ +GEA I+ +DSE LA Q RH +M G RYIEV++ +G
Sbjct: 271 NIARGGVALCLNAQGRRNGEALIRFVDSEQRD-LALQ-RHKHHM--GV--RYIEVYKATG 324
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + +L LP S+ P
Sbjct: 325 EEFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 361
Score = 89 (36.4 bits), Expect = 1.4e-61, Sum P(3) = 1.4e-61
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 551 AQQPMLSHLAQ--VPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+L L +P+P+ P + +GT +DC+RLRGLPY A + DI F+G+
Sbjct: 439 ASSPLLPALTAPLLPIPF-P---LAAGTGRDCVRLRGLPYTAT--IEDILSFLGE 487
Score = 88 (36.0 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E G+ V + G+P+G+AF E A A LR ++ I GK
Sbjct: 364 VLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAA--LRRHKG-ILGK-- 418
Query: 124 RYIEVFQCSGEDMNLVLNGVLP-PTSPAIS 152
RYIE+F+ + ++ VLN P PA++
Sbjct: 419 RYIELFRSTAAEVQQVLNRYASSPLLPALT 448
Score = 76 (31.8 bits), Expect = 7.5e-09, Sum P(4) = 7.5e-09
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGG 424
GV + L+ GR +G+A ++ E A +R HK + +RY+EV + E+ V G
Sbjct: 496 GVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVLMG 554
Score = 75 (31.5 bits), Expect = 1.4e-61, Sum P(3) = 1.4e-61
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 9 VFFVATAGLQGNLLGSDEQEIILLIYVIIDSYVNKV 44
V F ATAG G LGSDE ++ILL++ +++ +V
Sbjct: 32 VLFGATAGALGPDLGSDETDLILLVWQVVEPQSRQV 67
Score = 52 (23.4 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA 461
++RM+G+PY K ++ F+A
Sbjct: 665 LVRMQGVPYTAGMKDLLSVFQA 686
Score = 51 (23.0 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 265 LPA--LPAVPTSGGYFPQFQLPINMN-TAHLLQPMNTP 299
LPA +PA PT Y+P + MN TA+ P +P
Sbjct: 601 LPAARVPAAPTPVAYYPGPATQLYMNYTAYYPSPPVSP 638
Score = 41 (19.5 bits), Expect = 1.5e-56, Sum P(3) = 1.5e-56
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 581 IRLRGLPYEA-LCILMDIFFVGQ--QDSFVHKVP 611
+R++G+PY A + L+ +F Q D + VP
Sbjct: 666 VRMQGVPYTAGMKDLLSVFQAYQLAPDDYTSLVP 699
Score = 41 (19.5 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 576 TRKD--CIRLRGLPYEA 590
+R+D +RLRGLP+ A
Sbjct: 343 SREDQVILRLRGLPFSA 359
>UNIPROTKB|Q9H6T0 [details] [associations]
symbol:ESRP2 "Epithelial splicing regulatory protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0005634 GO:GO:0005813
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0043484 eggNOG:NOG262593
HOGENOM:HOG000112401 KO:K14947 HSSP:Q9Z2X1 CTD:80004 OMA:VIKQKYE
OrthoDB:EOG49078K EMBL:AK025571 EMBL:AK025901 EMBL:BC030146
EMBL:AF289577 IPI:IPI00034099 IPI:IPI00827597 RefSeq:NP_079215.2
UniGene:Hs.436585 UniGene:Hs.592053 ProteinModelPortal:Q9H6T0
SMR:Q9H6T0 IntAct:Q9H6T0 STRING:Q9H6T0 PhosphoSite:Q9H6T0
DMDM:74761482 PaxDb:Q9H6T0 PRIDE:Q9H6T0 Ensembl:ENST00000473183
Ensembl:ENST00000565858 GeneID:80004 KEGG:hsa:80004 UCSC:uc002evq.1
UCSC:uc010cfa.1 GeneCards:GC16M068263 HGNC:HGNC:26152 HPA:HPA048597
MIM:612960 neXtProt:NX_Q9H6T0 PharmGKB:PA164719361
InParanoid:Q9H6T0 ChiTaRS:ESRP2 GenomeRNAi:80004 NextBio:70079
Bgee:Q9H6T0 CleanEx:HS_RBM35B Genevestigator:Q9H6T0 Uniprot:Q9H6T0
Length = 727
Score = 500 (181.1 bits), Expect = 2.4e-61, Sum P(3) = 2.4e-61
Identities = 100/167 (59%), Positives = 122/167 (73%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GGVALCL+A GRRNGEA++RF+D E RD+AL+RHKHH+ RYIEV KA GE+F+ +AGG
Sbjct: 285 GGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ E FL+R QVI+R+RGLP+ V+ F G E C V G EG+LFV+ PDG+
Sbjct: 345 SLEVARFLSREDQVILRLRGLPFSAGPTDVLGFL--GPE--CPVTGGTEGLLFVRHPDGR 400
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
TGDAF LF EE A AL +HK +G RYIELFRST AEVQQVLN+
Sbjct: 401 PTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLNR 447
Score = 217 (81.4 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 55/123 (44%), Positives = 72/123 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL FLGE A++I GVHMV N QG+PSG+AFIQM S A AAQ H + M
Sbjct: 488 IEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM---- 543
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLL--SPGMLPHSSQP 170
K+RY+EV CS E+M+ VL +G+ PP P +SP T +P ++P +
Sbjct: 544 KERYVEVVPCSTEEMSRVLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAA 603
Query: 171 LYP 173
LYP
Sbjct: 604 LYP 606
Score = 156 (60.0 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 56/181 (30%), Positives = 84/181 (46%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFIN 420
G G+ GR G+A F +E AL+RHK + KRYIE+ T A + +N
Sbjct: 387 GTEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRSTAAEVQQVLN 446
Query: 421 -VAGGN---NNEAQAF-----LTRGA-QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVM 470
A G A L G + +R+RGLPY T + ++ F G E + ++
Sbjct: 447 RYASGPLLPTLTAPLLPIPFPLAPGTGRDCVRLRGLPYTATIEDILSFL--G-EAAADIR 503
Query: 471 DGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQQV 529
GV V G+ +GDAF+ E A A + HK+ + RY+E+ +T E+ +V
Sbjct: 504 P--HGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRV 561
Query: 530 L 530
L
Sbjct: 562 L 562
Score = 144 (55.7 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 437 AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEK 496
++ ++R RGLP++ + + V FF+ NV G GV G+ G+A + F
Sbjct: 255 SETVVRARGLPWQSSDQDVARFFKG-----LNVARG--GVALCLNAQGRRNGEALIRFVD 307
Query: 497 EEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+ D AL +HK +G+RYIE++++T E ++ T
Sbjct: 308 SEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGT 344
Score = 106 (42.4 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQ-MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
N+ GV + N+QG+ +GEA I+ +DSE LA Q RH +M G RYIEV++ +G
Sbjct: 281 NVARGGVALCLNAQGRRNGEALIRFVDSEQRD-LALQ-RHKHHM--GV--RYIEVYKATG 334
Query: 134 EDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
E+ + G + +S + +L LP S+ P
Sbjct: 335 EEFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGP 371
Score = 96 (38.9 bits), Expect = 9.4e-08, Sum P(4) = 9.4e-08
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 65 ILEFLG-EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQ 123
+L FLG E +G+ V + G+P+G+AF E A A LR ++ M+ GK
Sbjct: 374 VLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAA--LRRHKGML-GK-- 428
Query: 124 RYIEVFQCSGEDMNLVLN----GVLPPTSPA-ISPVGKTLLSPG 162
RYIE+F+ + ++ VLN G L PT A + P+ L +PG
Sbjct: 429 RYIELFRSTAAEVQQVLNRYASGPLLPTLTAPLLPIPFPL-APG 471
Score = 85 (35.0 bits), Expect = 2.4e-61, Sum P(3) = 2.4e-61
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 551 AQQPMLSHLAQ--VPVPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
A P+L L +P+P+ P + GT +DC+RLRGLPY A + DI F+G+
Sbjct: 449 ASGPLLPTLTAPLLPIPF-P---LAPGTGRDCVRLRGLPYTAT--IEDILSFLGE 497
Score = 77 (32.2 bits), Expect = 2.4e-61, Sum P(3) = 2.4e-61
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 4 PQYYCVFFVATAGLQGNLLGSDEQEIILLIYVIID 38
P V F ATAG G LGSDE ++ILL++ +++
Sbjct: 27 PGSLVVLFGATAGALGRDLGSDETDLILLVWQVVE 61
Score = 76 (31.8 bits), Expect = 8.2e-09, Sum P(4) = 8.2e-09
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKR-HKHHIDKRYIEVTKANGEDFINVAGG 424
GV + L+ GR +G+A ++ E A +R HK + +RY+EV + E+ V G
Sbjct: 506 GVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSRVLMG 564
Score = 52 (23.4 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 440 IIRMRGLPYECTAKQVIDFFEA 461
++RM+G+PY K ++ F+A
Sbjct: 675 LVRMQGVPYTAGMKDLLSVFQA 696
Score = 49 (22.3 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 265 LPA--LPAVPTSGGYFPQFQLPINMN-TAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQ 321
LPA +PA PT Y+P + +N TA+ P +P P L P
Sbjct: 611 LPAARVPAAPTPVAYYPGPATQLYLNYTAYYPSPPVSPTTVGYLTTPTA--ALASAPTSV 668
Query: 322 LNQT 325
L+Q+
Sbjct: 669 LSQS 672
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 576 TRKD--CIRLRGLPYEA 590
+R+D +RLRGLP+ A
Sbjct: 353 SREDQVILRLRGLPFSA 369
Score = 40 (19.1 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 559 LAQVPVPYLPQHIITSGTRKDCIRLRGLPYEA-LCILMDIFFVGQ--QDSFVHKVP 611
LA P L Q SG +R++G+PY A + L+ +F Q D + +P
Sbjct: 661 LASAPTSVLSQ----SGA---LVRMQGVPYTAGMKDLLSVFQAYQLPADDYTSLMP 709
>UNIPROTKB|H0YBB3 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 Ensembl:ENST00000517610
Bgee:H0YBB3 Uniprot:H0YBB3
Length = 522
Score = 545 (196.9 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 106/172 (61%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 112 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 171
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G C + G+EG+LFV PDG+
Sbjct: 172 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF--GQH--CPITGGKEGILFVTYPDGR 227
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 228 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 279
Score = 264 (98.0 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 61/129 (47%), Positives = 80/129 (62%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 317 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 372
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 373 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 432
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 433 -QPSVILNP 440
Score = 168 (64.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 214 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 273
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E + +
Sbjct: 274 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL--G-EFATD 330
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 331 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMN 388
Query: 528 QVL 530
VL
Sbjct: 389 FVL 391
Score = 136 (52.9 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 85 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 137
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 138 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 197
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 198 AEEV-VAFFGQHCPITGG 214
Score = 107 (42.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 108 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 162
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 163 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 196
Score = 93 (37.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F G+ +G+ V G+P+G+AF+ E A A LR +++++ GK
Sbjct: 199 EEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK 255
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV 154
RYIE+F+ + ++ VLN ++P +P I PV
Sbjct: 256 --RYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPV 291
Score = 87 (35.7 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 289 IPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILDFLGE 326
Score = 71 (30.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 415 SYTFPA--PAA-VIPTEAAIYQPSVILNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSP 471
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 472 NSLGYFPTAANLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 516
Score = 57 (25.1 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 493 VVRMQGLAYNTGVKEILNFFQ 513
>UNIPROTKB|H0YBR2 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 Ensembl:ENST00000519505
Uniprot:H0YBR2
Length = 502
Score = 545 (196.9 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 106/172 (61%), Positives = 130/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 119 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 178
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA++V+ FF G C + G+EG+LFV PDG+
Sbjct: 179 SNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFF--GQH--CPITGGKEGILFVTYPDGR 234
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 235 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 286
Score = 264 (98.0 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 61/129 (47%), Positives = 80/129 (62%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEFA++I GVHMV N QG+PSG+AFIQM S A++AAQ H +NM
Sbjct: 324 IEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM---- 379
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 380 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 439
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 440 -QPSVILNP 447
Score = 168 (64.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 221 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 280
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E + +
Sbjct: 281 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL--G-EFATD 337
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 338 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMN 395
Query: 528 QVL 530
VL
Sbjct: 396 FVL 398
Score = 136 (52.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 92 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 144
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 145 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 204
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 205 AEEV-VAFFGQHCPITGG 221
Score = 107 (42.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 115 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 169
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 170 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 203
Score = 93 (37.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 63 EHILEFLGEFASNIV-YQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E ++ F G+ +G+ V G+P+G+AF+ E A A LR +++++ GK
Sbjct: 206 EEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK 262
Query: 122 KQRYIEVFQCSGEDMNLVLNG-----VLPPTSPAISPV 154
RYIE+F+ + ++ VLN ++P +P I PV
Sbjct: 263 --RYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPV 298
Score = 87 (35.7 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 296 IPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILDFLGE 333
>UNIPROTKB|F1PSN8 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GeneTree:ENSGT00620000087828 OMA:VAAMTEC EMBL:AAEX03015961
Ensembl:ENSCAFT00000014804 Uniprot:F1PSN8
Length = 634
Score = 543 (196.2 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 106/172 (61%), Positives = 129/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 210 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 269
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF G C + G+EG+LFV PDG+
Sbjct: 270 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF--GQH--CPITGGKEGILFVTYPDGR 325
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 326 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 377
Score = 258 (95.9 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 59/127 (46%), Positives = 79/127 (62%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 415 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 470
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQ 174
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y Q
Sbjct: 471 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPP--PCLSPPSYTFPAPAAVIPTEAAIY-Q 527
Query: 175 HNTQINP 181
+ +NP
Sbjct: 528 PSVLLNP 534
Score = 171 (65.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 54/183 (29%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 312 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 371
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E S +
Sbjct: 372 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL--G-EFSTD 428
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 429 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 486
Query: 528 QVL 530
VL
Sbjct: 487 FVL 489
Score = 136 (52.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 183 IVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 235
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 236 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 295
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 296 ADEV-VAFFGQHCPITGG 312
Score = 107 (42.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 206 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 260
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 261 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 294
Score = 91 (37.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E A A LR +++++ GK RYIE+F+ + ++
Sbjct: 314 EGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK--RYIELFRSTAAEVQQ 368
Query: 139 VLNG-----VLPPTSPAISPV 154
VLN ++P +P I PV
Sbjct: 369 VLNRFSSAPLIPLPTPPIIPV 389
Score = 87 (35.7 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 387 IPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILDFLGE 424
Score = 72 (30.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 509 SYTFPA--PAA-VIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSSPGSP 565
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 566 TSLGYFPTAASLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 610
Score = 57 (25.1 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 587 VVRMQGLAYNTGVKEILNFFQ 607
>UNIPROTKB|F1PQY5 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AAEX03015961 Ensembl:ENSCAFT00000014811 Uniprot:F1PQY5
Length = 521
Score = 543 (196.2 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 106/172 (61%), Positives = 129/172 (75%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 93 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGT 152
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+NE FL++ QVI+RMRGLP+ TA +V+ FF G C + G+EG+LFV PDG+
Sbjct: 153 SNEVAQFLSKENQVIVRMRGLPFTATADEVVAFF--GQH--CPITGGKEGILFVTYPDGR 208
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 209 PTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP 260
Score = 256 (95.2 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 59/129 (45%), Positives = 79/129 (61%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E IL+FLGEF+++I GVHMV N QG+PSG+AFIQM S A++AAQ H + M
Sbjct: 298 IEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM---- 353
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP T +P + + +Y
Sbjct: 354 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 413
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 414 -QPSVLLNP 421
Score = 171 (65.3 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 54/183 (29%), Positives = 88/183 (48%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ GR G+A V F +E+ AL++HK + KRYIE+ ++ + V
Sbjct: 195 GKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLN 254
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + ++DF G E S +
Sbjct: 255 RFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFL--G-EFSTD 311
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A K HK+++ RY+E+F+ + E+
Sbjct: 312 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMN 369
Query: 528 QVL 530
VL
Sbjct: 370 FVL 372
Score = 136 (52.9 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I+R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 66 IVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 118
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTM-ELPKXXXXXXXXXXXXAQQPMLSH 558
D AL +HK +G RYIE++++T + ++ T E+ + P +
Sbjct: 119 RDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTAT 178
Query: 559 LAQVPVPYLPQHI-ITSG 575
+V V + QH IT G
Sbjct: 179 ADEV-VAFFGQHCPITGG 195
Score = 107 (42.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 89 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 143
Query: 135 DMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSS 168
D + G + +S + ++ LP ++
Sbjct: 144 DFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTA 177
Score = 91 (37.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
+G+ V G+P+G+AF+ E A A LR +++++ GK RYIE+F+ + ++
Sbjct: 197 EGILFVTYPDGRPTGDAFVLFACEEYAQNA--LRKHKDLL-GK--RYIELFRSTAAEVQQ 251
Query: 139 VLNG-----VLPPTSPAISPV 154
VLN ++P +P I PV
Sbjct: 252 VLNRFSSAPLIPLPTPPIIPV 272
Score = 87 (35.7 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 564 VPYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
+P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 270 IPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILDFLGE 307
Score = 72 (30.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/110 (30%), Positives = 42/110 (38%)
Query: 258 STTIPTNLPALPAVPTSGG-YFPQFQL-PINMNTAHLLQPMNTPFFFNM----PRMPVTP 311
S T P PA +PT Y P L P + + P T F N P P +P
Sbjct: 396 SYTFPA--PAA-VIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSSPGSP 452
Query: 312 QVLPKFPVH-QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYE 360
L FP L+ P P PG V + L N + +LN GY+
Sbjct: 453 TSLGYFPTAASLSGVP-----PQPGTVVRMQGLAYNTGVKEILNFFQGYQ 497
Score = 57 (25.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 440 IIRMRGLPYECTAKQVIDFFE 460
++RM+GL Y K++++FF+
Sbjct: 474 VVRMQGLAYNTGVKEILNFFQ 494
>UNIPROTKB|F1P509 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0043484 "regulation
of RNA splicing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005886
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0043484 GeneTree:ENSGT00620000087828 OMA:VAAMTEC
EMBL:AADN02024878 IPI:IPI00596521 Ensembl:ENSGALT00000025730
Uniprot:F1P509
Length = 523
Score = 528 (190.9 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 106/174 (60%), Positives = 129/174 (74%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG-- 423
GG ALCL+A GRRNGEA+VRF+++EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AG
Sbjct: 167 GGAALCLNAQGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGAK 226
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G +NE FL++ QVI+RMRGLP+ T ++V+ FF G C V G+EGVLFV PD
Sbjct: 227 GTSNEVAQFLSKENQVIVRMRGLPFNVTTEEVLAFF--GQH--CPVTGGKEGVLFVTYPD 282
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELP 537
+ TGDAFVLF EE A AL KHK+ +G RYIELFRST AEVQQVLN+ P
Sbjct: 283 SRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLNRYSSTP 336
Score = 260 (96.6 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 61/129 (47%), Positives = 79/129 (61%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E ILEFLGEF+++I GVHMV N QG+PSG+AFIQM S A+LAAQ H + M
Sbjct: 374 IEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQRCHKKTM---- 429
Query: 122 KQRYIEVFQCSGEDMNLVL-------NGVLPPTS--PAISPVGKTLLSPGMLPHSSQPLY 172
K RY+EVFQCS E+MN VL NG+ PP P +SP + +P + + LY
Sbjct: 430 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYSFPAPSAVVPTEAALY 489
Query: 173 PQHNTQINP 181
Q + +NP
Sbjct: 490 -QPSVLLNP 497
Score = 162 (62.1 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 53/183 (28%), Positives = 87/183 (47%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G GV R G+A V F +E+ ALK+HK + KRYIE+ ++ + V
Sbjct: 271 GKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRSTAAEVQQVLN 330
Query: 424 GNNNEA--------------QAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCN 468
++ Q F+ + IR+RGLPY T + +++F G E S +
Sbjct: 331 RYSSTPLIPLPTPPILPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILEFL--G-EFSTD 387
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSK-HKESIGIRYIELFRSTTAEVQ 527
+ GV V G+ +GDAF+ + + A A + HK+++ RY+E+F+ + E+
Sbjct: 388 IRT--HGVHMVLNHQGRPSGDAFIQMKSADRAFLAAQRCHKKTMKDRYVEVFQCSAEEMN 445
Query: 528 QVL 530
VL
Sbjct: 446 FVL 448
Score = 132 (51.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 140 VIRARGLPWQSSDQDIAKFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVNEEH 192
Query: 500 ADKALSKHKESIGIRYIELFRST 522
D AL +HK +G RYIE++++T
Sbjct: 193 RDLALQRHKHHMGNRYIEVYKAT 215
Score = 98 (39.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ +E LA Q RH +M G RYIEV++ +GE
Sbjct: 163 NIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLALQ-RHKHHM--GN--RYIEVYKATGE 217
Query: 135 D 135
D
Sbjct: 218 D 218
Score = 86 (35.3 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 554 PMLSHLAQVPV-PYLPQHIITSGTRKDCIRLRGLPYEALCILMDIF-FVGQ 602
P++ L P+ P LPQ + +DCIRLRGLPY A + DI F+G+
Sbjct: 336 PLIP-LPTPPILPVLPQQFVPPTNVRDCIRLRGLPYAAT--IEDILEFLGE 383
Score = 37 (18.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 581 IRLRGLPYEALCILMDIFFVGQ 602
+R+RGLP+ + FF GQ
Sbjct: 244 VRMRGLPFNVTTEEVLAFF-GQ 264
>WB|WBGene00006367 [details] [associations]
symbol:sym-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0010172 "embryonic body morphogenesis"
evidence=IGI] [GO:0050879 "multicellular organismal movement"
evidence=IGI] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0009792 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043484
GO:GO:0010172 eggNOG:NOG262593 GeneTree:ENSGT00620000087828
KO:K14947 HSSP:P55795 EMBL:Z68319 EMBL:Z70038 EMBL:AY220985
PIR:T25208 RefSeq:NP_495960.2 UniGene:Cel.5905
ProteinModelPortal:Q22708 SMR:Q22708 IntAct:Q22708 STRING:Q22708
PaxDb:Q22708 EnsemblMetazoa:ZK1067.6 GeneID:174461
KEGG:cel:CELE_ZK1067.6 UCSC:ZK1067.6 CTD:174461 WormBase:ZK1067.6
HOGENOM:HOG000154473 InParanoid:Q22708 OMA:VENVMFT NextBio:884134
GO:GO:0050879 Uniprot:Q22708
Length = 618
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 95/222 (42%), Positives = 137/222 (61%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GG+ALCLS+ GRRNGE +V+F QE RD+ALKRH++ + RYIEV KA ++F++VA G+
Sbjct: 209 GGIALCLSSEGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYIEVYKAGLDEFMHVATGS 268
Query: 426 NNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGK 485
+ EA F++ A +I+RMRGLPY+CT Q+ FFE + + +LF+ + DG+
Sbjct: 269 STEAMEFVSANA-IIVRMRGLPYDCTDAQIRTFFEP--------LKLTDKILFITRTDGR 319
Query: 486 ATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKXXXXXXX 545
TGDAFV FE EE+A + L KH++ IG RYIELF+ST AEVQQV+ + +
Sbjct: 320 PTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSSPAVANA 379
Query: 546 XXXXXAQQPMLSHLAQVPVPYLPQHIITS-GTRKDCIRLRGL 586
++ L +P QHI+T G ++ +G+
Sbjct: 380 VEAPEEKKKDCVRLRGLPYEATVQHIVTFLGDFATMVKFQGV 421
Score = 247 (92.0 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 63/138 (45%), Positives = 81/138 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
V+HI+ FLG+FA+ + +QGVHMVYN+QG PSGEAFIQM +E +A A HN M GK
Sbjct: 402 VQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAASACAAGVHNNFMSVGK 461
Query: 122 KQRYIEVFQCSGEDMNLV-LNGVLPPTSPAISPVGKTLLSPGMLPHSSQPLYPQHNTQIN 180
K+RYIEVFQ S E++NL L G P +P+G G LP Q PQ
Sbjct: 462 KKRYIEVFQASAEELNLHHLVGQQHQVPPP-APLGFM----GQLP--PQAPQPQQFWSSY 514
Query: 181 PGLSHLDPLVNVHLTQAL 198
P + P+V +TQ +
Sbjct: 515 PS-PPISPIVPGQVTQLI 531
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 48/164 (29%), Positives = 76/164 (46%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG----NNNEAQA 431
GR G+A V+F +E L +H+ I +RYIE+ K+ + V N++ A A
Sbjct: 318 GRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVVKRCNLINSSPAVA 377
Query: 432 FLTRGAQV----IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
+ +R+RGLPYE T + ++ F M +GV V G +
Sbjct: 378 NAVEAPEEKKKDCVRLRGLPYEATVQHIVTFL-----GDFATMVKFQGVHMVYNNQGHPS 432
Query: 488 GDAFVLFEKEEEADK-ALSKHKE--SIGI--RYIELFRSTTAEV 526
G+AF+ E+ A A H S+G RYIE+F+++ E+
Sbjct: 433 GEAFIQMINEQAASACAAGVHNNFMSVGKKKRYIEVFQASAEEL 476
Score = 126 (49.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 39/139 (28%), Positives = 64/139 (46%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGEDFINVA--GGNNNEAQAFLTRGAQVIIRMRGLPYEC 450
D+A+ R +D +E T F+N+ E Q G V+ R RGLP++
Sbjct: 137 DVAIARAILDMDDELLEKT----HQFVNIEYQPAPILEDQEVGADGDNVVCRARGLPWQA 192
Query: 451 TAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKES 510
+ V FF AG + ++ G G+ +G+ G+ V F +E D AL +H+
Sbjct: 193 SDHHVAQFF-AGLD----IVPG--GIALCLSSEGRRNGEVLVQFSSQESRDLALKRHRNF 245
Query: 511 IGIRYIELFRSTTAEVQQV 529
+ RYIE++++ E V
Sbjct: 246 LLSRYIEVYKAGLDEFMHV 264
Score = 72 (30.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/14 (85%), Positives = 14/14 (100%)
Query: 577 RKDCIRLRGLPYEA 590
+KDC+RLRGLPYEA
Sbjct: 387 KKDCVRLRGLPYEA 400
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 581 IRLRGLPYEALCILMDIFF 599
+R+RGLPY+ + FF
Sbjct: 283 VRMRGLPYDCTDAQIRTFF 301
>MGI|MGI:2138741 [details] [associations]
symbol:Hnrnpf "heterogeneous nuclear ribonucleoprotein F"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:2138741
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0003727
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043484
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD ChiTaRS:HNRNPF EMBL:AK076478 EMBL:BC018185
EMBL:BC025481 EMBL:BC027003 EMBL:BC029163 EMBL:BC029764
EMBL:BC033483 EMBL:BC089313 IPI:IPI00226073 IPI:IPI00798511
RefSeq:NP_001159899.1 RefSeq:NP_001159900.1 RefSeq:NP_001159901.1
RefSeq:NP_001159902.1 RefSeq:NP_001159903.1 RefSeq:NP_001159904.1
RefSeq:NP_598595.1 UniGene:Mm.422979 UniGene:Mm.476420 PDB:2DB1
PDBsum:2DB1 ProteinModelPortal:Q9Z2X1 SMR:Q9Z2X1 IntAct:Q9Z2X1
STRING:Q9Z2X1 PhosphoSite:Q9Z2X1 REPRODUCTION-2DPAGE:Q9Z2X1
PaxDb:Q9Z2X1 PRIDE:Q9Z2X1 Ensembl:ENSMUST00000035493
Ensembl:ENSMUST00000163168 Ensembl:ENSMUST00000167182
Ensembl:ENSMUST00000167657 Ensembl:ENSMUST00000170346
Ensembl:ENSMUST00000180020 Ensembl:ENSMUST00000180341 GeneID:98758
KEGG:mmu:98758 UCSC:uc009dle.2 InParanoid:Q9Z2X1
EvolutionaryTrace:Q9Z2X1 NextBio:353639 Bgee:Q9Z2X1
Genevestigator:Q9Z2X1 GermOnline:ENSMUSG00000042079 Uniprot:Q9Z2X1
Length = 415
Score = 260 (96.6 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 64/166 (38%), Positives = 96/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA--NDG---FVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 178 (67.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 124 (48.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 119 (46.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R + G
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 60 (26.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F E A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 50 (22.7 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YLPQHIITSGTRKDCIRLRGLPYEA 590
Y T C+ +RGLPY+A
Sbjct: 276 YGDSEFTVQSTTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIVQFFSG 133
>RGD|620366 [details] [associations]
symbol:Hnrnpf "heterogeneous nuclear ribonucleoprotein F"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0043484 "regulation of RNA splicing"
evidence=ISO;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:620366 GO:GO:0005634 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0003727 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043484 HSSP:Q9Z2X1 HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD EMBL:AB022209 EMBL:BC097275 EMBL:BC103634
IPI:IPI00210357 RefSeq:NP_001032362.1 RefSeq:NP_001032363.1
RefSeq:NP_001032364.1 RefSeq:NP_071792.1 UniGene:Rn.144596
ProteinModelPortal:Q794E4 SMR:Q794E4 IntAct:Q794E4 STRING:Q794E4
PhosphoSite:Q794E4 PRIDE:Q794E4 Ensembl:ENSRNOT00000019529
GeneID:64200 KEGG:rno:64200 UCSC:RGD:620366 InParanoid:Q794E4
NextBio:612884 Genevestigator:Q794E4 GermOnline:ENSRNOG00000014562
Uniprot:Q794E4
Length = 415
Score = 260 (96.6 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 64/166 (38%), Positives = 96/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA--NDG---FVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 178 (67.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGYVVKLRGLPWSCSIEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 124 (48.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 119 (46.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R + G
Sbjct: 24 IEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 60 (26.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F E A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 50 (22.7 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YLPQHIITSGTRKDCIRLRGLPYEA 590
Y T C+ +RGLPY+A
Sbjct: 276 YGDSEFTVQSTTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIVQFFSG 133
>UNIPROTKB|P52597 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043484 "regulation of RNA splicing" evidence=IDA;IMP]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;TAS] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
Gene3D:3.30.70.330 GO:GO:0043484 GO:GO:0000398 GO:GO:0071013
EMBL:CH471160 EMBL:AL512654 HOGENOM:HOG000220896 HOVERGEN:HBG055557
HPA:HPA001359 HPA:HPA016884 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD EMBL:L28010 EMBL:AK001364 EMBL:BC001432 EMBL:BC004254
EMBL:BC015580 EMBL:BC016736 EMBL:BC106008 IPI:IPI00003881
PIR:S43484 RefSeq:NP_001091674.1 RefSeq:NP_001091675.1
RefSeq:NP_001091676.1 RefSeq:NP_001091677.1 RefSeq:NP_001091678.1
RefSeq:NP_004957.1 UniGene:Hs.712955 UniGene:Hs.808 PDB:2HGL
PDB:2HGM PDB:2HGN PDB:2KFY PDB:2KG0 PDB:2KG1 PDB:3TFY PDBsum:2HGL
PDBsum:2HGM PDBsum:2HGN PDBsum:2KFY PDBsum:2KG0 PDBsum:2KG1
PDBsum:3TFY ProteinModelPortal:P52597 SMR:P52597 IntAct:P52597
MINT:MINT-1157890 STRING:P52597 PhosphoSite:P52597 DMDM:1710628
OGP:P52597 PaxDb:P52597 PeptideAtlas:P52597 PRIDE:P52597 DNASU:3185
Ensembl:ENST00000337970 Ensembl:ENST00000356053
Ensembl:ENST00000357065 Ensembl:ENST00000443950
Ensembl:ENST00000544000 GeneID:3185 KEGG:hsa:3185 UCSC:uc001jar.2
GeneCards:GC10M043881 HGNC:HGNC:5039 MIM:601037 neXtProt:NX_P52597
PharmGKB:PA162391271 InParanoid:P52597 PhylomeDB:P52597
ChiTaRS:HNRNPF EvolutionaryTrace:P52597 GenomeRNAi:3185
NextBio:12654 ArrayExpress:P52597 Bgee:P52597 CleanEx:HS_HNRNPF
Genevestigator:P52597 GermOnline:ENSG00000169813 Uniprot:P52597
Length = 415
Score = 260 (96.6 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 65/166 (39%), Positives = 95/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA--NDG---FVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 174 (66.3 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 35/95 (36%), Positives = 57/95 (60%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 124 (48.7 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 114 (45.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R + G
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 60 (26.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F E A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 50 (22.7 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YLPQHIITSGTRKDCIRLRGLPYEA 590
Y T C+ +RGLPY+A
Sbjct: 276 YGDSEFTVQSTTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIVQFFSG 133
>UNIPROTKB|Q60HC3 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9541 "Macaca fascicularis" [GO:0003727 "single-stranded RNA
binding" evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0003727 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043484 HOVERGEN:HBG055557 InterPro:IPR012996 Pfam:PF08080
EMBL:AB125204 EMBL:AB168246 ProteinModelPortal:Q60HC3 SMR:Q60HC3
PRIDE:Q60HC3 Uniprot:Q60HC3
Length = 415
Score = 260 (96.6 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 65/166 (39%), Positives = 95/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADSA--NDG---FVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 174 (66.3 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 35/95 (36%), Positives = 57/95 (60%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELG 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 124 (48.7 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 114 (45.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF+++ SE +A L+ +R + G
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 60 (26.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F E A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 50 (22.7 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YLPQHIITSGTRKDCIRLRGLPYEA 590
Y T C+ +RGLPY+A
Sbjct: 276 YGDSEFTVQSTTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIVQFFSG 133
>UNIPROTKB|Q5E9J1 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9913 "Bos taurus" [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0003727 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043484 HSSP:Q9Z2X1
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 EMBL:BT020929 EMBL:BC102955
IPI:IPI00685278 RefSeq:NP_001014860.1 UniGene:Bt.23170
ProteinModelPortal:Q5E9J1 SMR:Q5E9J1 STRING:Q5E9J1 PRIDE:Q5E9J1
Ensembl:ENSBTAT00000011658 GeneID:506917 KEGG:bta:506917 CTD:3185
eggNOG:NOG326351 InParanoid:Q5E9J1 OMA:SDCTIRD NextBio:20867801
Uniprot:Q5E9J1
Length = 414
Score = 260 (96.6 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 65/166 (39%), Positives = 96/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G+ GV + GR++GEA V ++ +ALK+ + + RYIEV K++ D++
Sbjct: 39 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT +++I FF +G E N G+
Sbjct: 99 HSGPNSADTA--NDG---FVRLRGLPFGCTKEEIIQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 179 (68.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGVAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 124 (48.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 120 (47.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF++++SE LA L+ +R + G
Sbjct: 24 VEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 60 (26.2 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F E A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 49 (22.3 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY+A
Sbjct: 286 TTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIIQFFSG 133
>UNIPROTKB|E2RB90 [details] [associations]
symbol:HNRNPF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0003727 Gene3D:3.30.70.330 GO:GO:0043484 GO:GO:0071013
GeneTree:ENSGT00620000087736 KO:K12898 InterPro:IPR012996
Pfam:PF08080 CTD:3185 OMA:SDCTIRD EMBL:AAEX03015383
RefSeq:XP_848697.1 RefSeq:XP_856894.1 RefSeq:XP_856973.1
ProteinModelPortal:E2RB90 Ensembl:ENSCAFT00000011299 GeneID:477757
KEGG:cfa:477757 NextBio:20853178 Uniprot:E2RB90
Length = 414
Score = 260 (96.6 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 65/166 (39%), Positives = 95/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA--NDG---FVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 181 (68.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIHDGAAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 124 (48.7 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F EEA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 117 (46.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + + GVH +Y +G+ SGEAF++++SE +A L+ +R + G
Sbjct: 24 VEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 60 (26.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F E A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 49 (22.3 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY+A
Sbjct: 286 TTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIVQFFSG 133
>UNIPROTKB|F1RG16 [details] [associations]
symbol:HNRNPF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
KO:K12898 InterPro:IPR012996 Pfam:PF08080 CTD:3185 OMA:SDCTIRD
EMBL:CU468599 RefSeq:XP_001929089.1 RefSeq:XP_003359253.1
RefSeq:XP_003483523.1 UniGene:Ssc.93755 Ensembl:ENSSSCT00000011169
GeneID:100155475 KEGG:ssc:100155475 Uniprot:F1RG16
Length = 414
Score = 260 (96.6 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 65/166 (39%), Positives = 95/166 (57%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR++GEA V ++ MALK+ + + RYIEV K++ D++
Sbjct: 39 GAAGVHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ CT ++++ FF +G E N G+
Sbjct: 99 HSGPNSADTA--NDG---FVRLRGLPFGCTKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
P+GK TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ EV+
Sbjct: 147 PEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVR 192
Score = 182 (69.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+ + V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFL-----SDCTIRDGAAGVHFIYTREGRQSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K +ES+G RYIE+F+S E+ VL
Sbjct: 63 SEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVL 97
Score = 121 (47.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +FF ++ G PDG+ TG+A V F +EA
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHDEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYIELF ++T
Sbjct: 342 VAAMSKDRANMQHRYIELFLNST 364
Score = 116 (45.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE + FL + GVH +Y +G+ SGEAF++++SE +A L+ +R + G
Sbjct: 24 VEDVQNFLSDCTIRDGAAGVHFIYTREGRQSGEAFVELESEDDVKMA--LKKDRESM-G- 79
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ +M+ VL
Sbjct: 80 -HRYIEVFKSHRTEMDWVL 97
Score = 57 (25.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEA 429
GR GEA V F + A+ + + ++ RYIE+ F+N G +N A
Sbjct: 325 GRVTGEADVEFATHDEAVAAMSKDRANMQHRYIEL-------FLNSTTGASNGA 371
Score = 49 (22.3 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY+A
Sbjct: 286 TTGHCVHMRGLPYKA 300
Score = 39 (18.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CTKEEIVQFFSG 133
>UNIPROTKB|F5H5I6 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
IPI:IPI00979483 ProteinModelPortal:F5H5I6 SMR:F5H5I6 PRIDE:F5H5I6
Ensembl:ENST00000545193 UCSC:uc011caz.1 ArrayExpress:F5H5I6
Bgee:F5H5I6 Uniprot:F5H5I6
Length = 362
Score = 255 (94.8 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 167
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 183 (69.5 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 34/97 (35%), Positives = 60/97 (61%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 123
Score = 119 (46.9 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 45 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 130
Score = 117 (46.2 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 272 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 354
Score = 64 (27.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 316 SSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIEL 353
Score = 49 (22.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 VRLRGLPYS--CNEKDIVDFFAG 154
>UNIPROTKB|A6QPB2 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000220896
HOVERGEN:HBG055557 OrthoDB:EOG4XPQGW GeneTree:ENSGT00620000087736
EMBL:DAAA02018025 EMBL:DAAA02018026 EMBL:BC149233 IPI:IPI00705255
UniGene:Bt.53639 SMR:A6QPB2 Ensembl:ENSBTAT00000039551
Uniprot:A6QPB2
Length = 362
Score = 255 (94.8 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 60 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 119
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 120 SLHVKSAPMVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 167
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 168 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 212
Score = 181 (68.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 33 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 87
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
KAL KH+ +G RY+E++ +V ++
Sbjct: 88 VQKALEKHRMYMGQRYVEVYEINNEDVDALM 118
Score = 117 (46.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 45 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 100
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 101 -QRYVEVYEINNEDVDALMKSLHVKSAPMVN 130
Score = 113 (44.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 272 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 322
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 323 GEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 354
Score = 64 (27.6 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 316 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIEL 353
Score = 49 (22.3 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 134 VRLRGLPYS--CNEKDIVDFFAG 154
>UNIPROTKB|D6RBM0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HOGENOM:HOG000220896 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 IPI:IPI00964535 ProteinModelPortal:D6RBM0
SMR:D6RBM0 Ensembl:ENST00000505811 ArrayExpress:D6RBM0 Bgee:D6RBM0
Uniprot:D6RBM0
Length = 212
Score = 243 (90.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 121 (47.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>TAIR|locus:2156897 [details] [associations]
symbol:AT5G66010 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K12898
IPI:IPI00541506 RefSeq:NP_201402.3 UniGene:At.28214
ProteinModelPortal:F4JZ11 SMR:F4JZ11 EnsemblPlants:AT5G66010.1
GeneID:836731 KEGG:ath:AT5G66010 OMA:YEVGSKR Uniprot:F4JZ11
Length = 255
Score = 242 (90.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 82/231 (35%), Positives = 120/231 (51%)
Query: 321 QLNQTPTVYTIPTPGNPVALC---PLVQNIWLSLLLNTIPGYEQVLGLGGV-ALCLSAFG 376
Q N V T PT P P+V+ L I +E GL V L +S G
Sbjct: 25 QSNPYLAVGTGPTSFPPFGYAGGFPVVRLRGLPFNCADIDIFEFFAGLNIVDVLLVSKNG 84
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-VA---GGNNNEAQAF 432
+ +GEA V F ++AL+R +H++ +RY+EV + + +D+ N VA G E +A
Sbjct: 85 KFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAYEYEVRAS 144
Query: 433 L-----TRGAQV----------IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
+R + +++MRGLPY Q+I+FF +G + V+ G V
Sbjct: 145 PPPTGPSRAKRFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFF-SGYK----VIQGR--VQ 197
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
V +PDGKATG+AFV FE EEA +A++K K SIG RY+ELF +T E ++
Sbjct: 198 VVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELFPTTREEARR 248
>UNIPROTKB|F1LRK4 [details] [associations]
symbol:Grsf1 "Protein Grsf1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 GeneTree:ENSGT00620000087736
IPI:IPI00364208 PRIDE:F1LRK4 Ensembl:ENSRNOT00000004551
ArrayExpress:F1LRK4 Uniprot:F1LRK4
Length = 361
Score = 252 (93.8 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 62 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQ 121
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 122 VKPTPALSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRR 169
Query: 487 -TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 170 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 211
Score = 177 (67.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 33/97 (34%), Positives = 58/97 (59%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 32 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 86
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 87 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 122
Score = 124 (48.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 44 VEDVLSFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 99
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +PA+S
Sbjct: 100 -QRYVEVYEINNEDVDALMKSLQVKPTPALS 129
Score = 106 (42.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP++ A+ +I+FF A + M+ GKATG+A V F+ E+A
Sbjct: 284 VHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKATGEADVHFDTHEDA 334
Query: 501 DKALSKHKESIGIRYIELF 519
A+ K + + RYIELF
Sbjct: 335 VAAMLKDRSHVQHRYIELF 353
Score = 65 (27.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 315 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIEL 352
Score = 49 (22.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 133 VRLRGLPYS--CNEKDIVDFFAG 153
>UNIPROTKB|F1MZF0 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 OMA:LSFFSDC
EMBL:DAAA02018025 EMBL:DAAA02018026 IPI:IPI00700446
Ensembl:ENSBTAT00000011313 ArrayExpress:F1MZF0 Uniprot:F1MZF0
Length = 399
Score = 255 (94.8 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 97 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 156
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 157 SLHVKSAPMVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 204
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A +AL KH+E IG RYIE+F S EV+
Sbjct: 205 GRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNEVR 249
Score = 181 (68.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 70 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 124
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
KAL KH+ +G RY+E++ +V ++
Sbjct: 125 VQKALEKHRMYMGQRYVEVYEINNEDVDALM 155
Score = 117 (46.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 82 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 137
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 138 -QRYVEVYEINNEDVDALMKSLHVKSAPMVN 167
Score = 113 (44.8 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 309 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 359
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 360 GEADVHFDTHEDAVAAMLKDRSHVHHRYIELF 391
Score = 64 (27.6 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 353 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIEL 390
Score = 49 (22.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 171 VRLRGLPYS--CNEKDIVDFFAG 191
>UNIPROTKB|E5RI26 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 IPI:IPI00889667
ProteinModelPortal:E5RI26 SMR:E5RI26 Ensembl:ENST00000522756
ArrayExpress:E5RI26 Bgee:E5RI26 Uniprot:E5RI26
Length = 94
Score = 238 (88.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 366 GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGG 424
GG ALCL+A GRRNGEA+VRF+ +EHRD+AL+RHKHH+ RYIEV KA GEDF+ +AGG
Sbjct: 36 GGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGG 94
Score = 132 (51.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R RGLP++ + + + FF+ N+ G G G+ G+A V F EE
Sbjct: 9 VVRARGLPWQSSDQDIARFFKG-----LNIAKG--GAALCLNAQGRRNGEALVRFVSEEH 61
Query: 500 ADKALSKHKESIGIRYIELFRST 522
D AL +HK +G RYIE++++T
Sbjct: 62 RDLALQRHKHHMGTRYIEVYKAT 84
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 75 NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGE 134
NI G + N+QG+ +GEA ++ SE LA Q RH +M G RYIEV++ +GE
Sbjct: 32 NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ-RHKHHM--GT--RYIEVYKATGE 86
Query: 135 DMNLVLNG 142
D + G
Sbjct: 87 DFLKIAGG 94
>UNIPROTKB|H0Y8R1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
PRIDE:H0Y8R1 Ensembl:ENST00000514161 Bgee:H0Y8R1 Uniprot:H0Y8R1
Length = 417
Score = 255 (94.8 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 115 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 174
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 175 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 222
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 223 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 267
Score = 183 (69.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 34/97 (35%), Positives = 60/97 (61%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 88 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 142
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 143 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 178
Score = 119 (46.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 100 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 155
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 156 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 185
Score = 117 (46.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 327 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 377
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 378 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 409
Score = 64 (27.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 371 SSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIEL 408
Score = 49 (22.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 189 VRLRGLPYS--CNEKDIVDFFAG 209
>UNIPROTKB|Q12849 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378
"mRNA polyadenylation" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 GO:GO:0009952
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006378 EMBL:CH471057
GO:GO:0016331 EMBL:U07231 EMBL:AK056891 EMBL:AK090755 EMBL:AK094806
EMBL:AK095799 EMBL:AK097055 EMBL:AK127161 EMBL:AC021989
EMBL:BC040485 IPI:IPI00478657 IPI:IPI00914953 PIR:S48081
RefSeq:NP_001091947.1 RefSeq:NP_002083.3 UniGene:Hs.309763 PDB:2LMI
PDBsum:2LMI ProteinModelPortal:Q12849 SMR:Q12849 IntAct:Q12849
STRING:Q12849 PhosphoSite:Q12849 DMDM:215274142 PaxDb:Q12849
PRIDE:Q12849 Ensembl:ENST00000254799 Ensembl:ENST00000439371
Ensembl:ENST00000502323 GeneID:2926 KEGG:hsa:2926 UCSC:uc003hfs.2
CTD:2926 GeneCards:GC04M071681 HGNC:HGNC:4610 HPA:HPA036985
MIM:604851 neXtProt:NX_Q12849 PharmGKB:PA29003 eggNOG:NOG319259
HOGENOM:HOG000220896 HOVERGEN:HBG055557 InParanoid:Q12849
OrthoDB:EOG4XPQGW ChiTaRS:GRSF1 GenomeRNAi:2926 NextBio:11601
ArrayExpress:Q12849 Bgee:Q12849 CleanEx:HS_GRSF1
Genevestigator:Q12849 GermOnline:ENSG00000132463 Uniprot:Q12849
Length = 480
Score = 255 (94.8 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 178 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 237
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 238 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 285
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 286 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 330
Score = 183 (69.5 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
Identities = 34/97 (35%), Positives = 60/97 (61%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 151 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 205
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 206 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 241
Score = 119 (46.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 163 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 218
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 219 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 248
Score = 117 (46.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 390 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 440
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 441 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 472
Score = 64 (27.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 434 SSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIEL 471
Score = 49 (22.3 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 252 VRLRGLPYS--CNEKDIVDFFAG 272
Score = 43 (20.2 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 238 PTLIXXXXXXXXXXXXXXXKSTTIPTNLPALPAVPT 273
P + +++ +P +L A AVPT
Sbjct: 79 PPAVATSAAAAAAASYSALRASLLPQSLAAAAAVPT 114
>UNIPROTKB|H0YAK1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
OMA:LSFFSDC PRIDE:H0YAK1 Ensembl:ENST00000499044 Bgee:H0YAK1
Uniprot:H0YAK1
Length = 453
Score = 255 (94.8 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 151 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 210
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
++ + G ++R+RGLPY C K ++DFF AG N++D + FV
Sbjct: 211 SLQVKSSPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYR 258
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 259 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 303
Score = 183 (69.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 34/97 (35%), Positives = 60/97 (61%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 124 LIRAQGLPWSCTMEDVLNFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 178
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 179 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 214
Score = 119 (46.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+E +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 136 MEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 191
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 192 -QRYVEVYEINNEDVDALMKSLQVKSSPVVN 221
Score = 117 (46.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 363 EAADFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 413
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 414 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 445
Score = 64 (27.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 407 SSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIEL 444
Score = 49 (22.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 225 VRLRGLPYS--CNEKDIVDFFAG 245
>ZFIN|ZDB-GENE-040426-1856 [details] [associations]
symbol:hnrnph1 "heterogeneous nuclear
ribonucleoprotein H1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1856 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 CTD:3187 KO:K12898 InterPro:IPR012996
Pfam:PF08080 EMBL:CU855621 EMBL:CU658205 EMBL:BC065439
IPI:IPI00489200 RefSeq:NP_991247.1 UniGene:Dr.17640 SMR:Q6P0V0
Ensembl:ENSDART00000059918 GeneID:402984 KEGG:dre:402984
NextBio:20816791 Uniprot:Q6P0V0
Length = 403
Score = 245 (91.3 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 59/155 (38%), Positives = 90/155 (58%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---INVAGGNNNEAQAF 432
GR +GEA V F +E +A+K+ + + RY+EV K+N + + G N E
Sbjct: 47 GRPSGEAFVEFESEEDLKIAVKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNCPET--- 103
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
G ++R+RGLP+ C+ ++++ FF AG E N G+ G++TG+AFV
Sbjct: 104 ---GGDGLVRLRGLPFGCSKEEIVQFF-AGLEIVPN------GITLPVDFQGRSTGEAFV 153
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
F ++ A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 154 QFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVR 188
Score = 171 (65.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 34/98 (34%), Positives = 57/98 (58%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++R+RGLP+ C+ +V FF + C + + F +G+ +G+AFV FE
Sbjct: 4 GEGFVVRVRGLPWSCSVDEVQRFF-----SECKIASNGTSIHFTYTREGRPSGEAFVEFE 58
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
EE+ A+ K +E++G RY+E+F+S + E+ VL T
Sbjct: 59 SEEDLKIAVKKDRETMGHRYVEVFKSNSVEMDWVLKHT 96
Score = 124 (48.7 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF N V E G PDG+ TG+A V F E+A
Sbjct: 253 VHMRGLPYRATETDIYNFFSP--LNPVRV-HLEIG------PDGRVTGEADVEFATHEDA 303
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 304 VAAMSKDKANMQHRYVELFLNSTA 327
Score = 110 (43.8 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 62 VEHILEFLGE--FASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V+ + F E ASN +H Y +G+PSGEAF++ +SE +A ++ +R +
Sbjct: 20 VDEVQRFFSECKIASNGT--SIHFTYTREGRPSGEAFVEFESEEDLKIA--VKKDRETM- 74
Query: 120 GKKQRYIEVFQCSGEDMNLVLNGVLP 145
G RY+EVF+ + +M+ VL P
Sbjct: 75 G--HRYVEVFKSNSVEMDWVLKHTGP 98
Score = 104 (41.7 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 136 GITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSS 183
Score = 82 (33.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 63 EHILEFLGEFAS-NIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
E I++F FA IV G+ + + QG+ +GEAF+Q S+ A A + +H + G
Sbjct: 121 EEIVQF---FAGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALK-KHKERI--G- 173
Query: 122 KQRYIEVFQCS 132
RYIE+F+ S
Sbjct: 174 -HRYIEIFKSS 183
Score = 60 (26.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-VAGGNN 426
GR GEA V F E A+ + K ++ RY+E+ F+N AGG +
Sbjct: 287 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL-------FLNSTAGGGS 331
Score = 48 (22.0 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 248 TTGHCVHMRGLPYRA 262
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 109 VRLRGLPFG--CSKEEIVQFFAG 129
>MGI|MGI:106479 [details] [associations]
symbol:Grsf1 "G-rich RNA sequence binding factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:106479 GO:GO:0005739 GO:GO:0000166 GO:GO:0009952
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016331 CTD:2926
eggNOG:NOG319259 HOGENOM:HOG000220896 HOVERGEN:HBG055557
OrthoDB:EOG4XPQGW EMBL:AK044889 EMBL:AK045986 EMBL:AK077782
IPI:IPI00453582 RefSeq:NP_848815.2 UniGene:Mm.332474
ProteinModelPortal:Q8C5Q4 SMR:Q8C5Q4 STRING:Q8C5Q4
PhosphoSite:Q8C5Q4 PaxDb:Q8C5Q4 PRIDE:Q8C5Q4 DNASU:231413
Ensembl:ENSMUST00000078945 GeneID:231413 KEGG:mmu:231413
UCSC:uc008yab.1 GeneTree:ENSGT00620000087736 InParanoid:Q8C5Q4
OMA:LSFFSDC NextBio:380544 Bgee:Q8C5Q4 CleanEx:MM_GRSF1
Genevestigator:Q8C5Q4 GermOnline:ENSMUSG00000044221 Uniprot:Q8C5Q4
Length = 479
Score = 254 (94.5 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 180 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQ 239
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 240 VKPSPVLSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRR 287
Query: 487 -TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 288 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 178 (67.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 33/97 (34%), Positives = 59/97 (60%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V++FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLNFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 240
Score = 123 (48.4 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 162 VEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + SP +S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPSPVLS 247
Score = 110 (43.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 389 EAVDFGTLPSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V F+ E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFDTHEDAVAAMLKDRSHVQHRYIELF 471
Score = 65 (27.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 433 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIEL 470
Score = 51 (23.0 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 568 PQHIITSGTRKDCIRLRGLPYEALCILMDI--FFVG 601
P +++ G +RLRGLPY C DI FF G
Sbjct: 242 PSPVLSDGV----VRLRGLPYS--CNEKDIVDFFAG 271
>UNIPROTKB|P55795 [details] [associations]
symbol:HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
GO:GO:0000166 GO:GO:0015629 Reactome:REACT_1675 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 EMBL:U78027 EMBL:AL035422 GO:GO:0000398
EMBL:CH471115 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 HPA:HPA001359 HPA:HPA016884 KO:K12898
OrthoDB:EOG4CRM03 InterPro:IPR012996 Pfam:PF08080 CTD:3188
EMBL:U01923 EMBL:BC130343 EMBL:BC130345 IPI:IPI00026230
RefSeq:NP_001027565.1 RefSeq:NP_062543.1 UniGene:Hs.432485 PDB:1WEZ
PDB:1WG5 PDBsum:1WEZ PDBsum:1WG5 ProteinModelPortal:P55795
SMR:P55795 IntAct:P55795 MINT:MINT-2804293 STRING:P55795
PhosphoSite:P55795 DMDM:2500576 REPRODUCTION-2DPAGE:IPI00026230
PaxDb:P55795 PeptideAtlas:P55795 PRIDE:P55795 DNASU:3188
Ensembl:ENST00000316594 GeneID:3188 KEGG:hsa:3188 UCSC:uc004ehm.3
GeneCards:GC0XP100663 HGNC:HGNC:5042 HPA:CAB004436 MIM:300610
neXtProt:NX_P55795 PharmGKB:PA162391316 InParanoid:P55795
OMA:MEANMTI PhylomeDB:P55795 EvolutionaryTrace:P55795
GenomeRNAi:3188 NextBio:12674 ArrayExpress:P55795 Bgee:P55795
CleanEx:HS_HNRNPH2 Genevestigator:P55795 GermOnline:ENSG00000126945
Uniprot:P55795
Length = 449
Score = 246 (91.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V +E +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 198 (74.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 38/101 (37%), Positives = 64/101 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E EEE AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 124 (48.7 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 119 (46.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 DEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 58 (25.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|F1Q0B7 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 EMBL:AAEX03009136
Ensembl:ENSCAFT00000004672 OMA:GESEMAN Uniprot:F1Q0B7
Length = 281
Score = 219 (82.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 52/134 (38%), Positives = 81/134 (60%)
Query: 395 ALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQ 454
AL++H+ ++ +RY+EV + N ED + ++ + G ++R+RGLPY C K
Sbjct: 10 ALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDG---VVRLRGLPYSCNEKD 66
Query: 455 VIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA-TGDAFVLFEKEEEADKALSKHKESIGI 513
++DFF AG N++D + FV G+ TG+A+V FE+ E A++AL KH+E IG
Sbjct: 67 IVDFF-AGL----NIVD----ITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 117
Query: 514 RYIELFRSTTAEVQ 527
RYIE+F S EV+
Sbjct: 118 RYIEIFPSRRNEVR 131
Score = 113 (44.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 393 DMALKRHKHHIDKRYIEVTKANGE-DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECT 451
+MA + H+ + D R + ++ E + EA F + + MRGLP++
Sbjct: 155 EMAFEEHEVNEDIRPMTAFESEKEIELPKEMSEKLPEAVDFGATSSLHFVHMRGLPFQAN 214
Query: 452 AKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESI 511
A+ +I+FF A + M+ +GKATG+A V F+ E+A A+ K + +
Sbjct: 215 AQDIINFF-APLKPVRITMEYSS--------NGKATGEADVHFDTHEDAVAAMLKDRSHV 265
Query: 512 GIRYIELF 519
RYIELF
Sbjct: 266 HHRYIELF 273
Score = 68 (29.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 99 MDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
M+SE A + +H M G QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 1 MESEQDVQKALE-KHR--MYMG--QRYVEVYEINNEDVDALMKSLQVKSSPVVN 49
Score = 37 (18.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 567 LPQHIITSGTRK-DCIRLRGLPYEA 590
LP+ + T + +RGLP++A
Sbjct: 189 LPEAVDFGATSSLHFVHMRGLPFQA 213
>UNIPROTKB|F1LMB8 [details] [associations]
symbol:Grsf1 "Protein Grsf1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 OMA:LSFFSDC IPI:IPI00949228
PRIDE:F1LMB8 Ensembl:ENSRNOT00000065436 ArrayExpress:F1LMB8
Uniprot:F1LMB8
Length = 479
Score = 252 (93.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 180 GIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQ 239
Query: 427 NEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
+ L+ G ++R+RGLPY C K ++DFF AG N++D + FV G+
Sbjct: 240 VKPTPALSDG---VVRLRGLPYSCNEKDIVDFF-AGL----NIVD----ITFVMDYRGRR 287
Query: 487 -TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 288 KTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 177 (67.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 33/97 (34%), Positives = 58/97 (59%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + + E G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 240
Score = 124 (48.7 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 162 VEDVLSFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + +PA+S
Sbjct: 218 -QRYVEVYEINNEDVDALMKSLQVKPTPALS 247
Score = 106 (42.4 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP++ A+ +I+FF A + M+ GKATG+A V F+ E+A
Sbjct: 402 VHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKATGEADVHFDTHEDA 452
Query: 501 DKALSKHKESIGIRYIELF 519
A+ K + + RYIELF
Sbjct: 453 VAAMLKDRSHVQHRYIELF 471
Score = 65 (27.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 433 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIEL 470
Score = 49 (22.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 251 VRLRGLPYS--CNEKDIVDFFAG 271
>UNIPROTKB|I3L816 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:CU915704
Ensembl:ENSSSCT00000031735 Uniprot:I3L816
Length = 423
Score = 243 (90.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 38 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 97
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 98 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 145
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 146 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 191
Score = 193 (73.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 4 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 58
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 59 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 99
Score = 126 (49.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 290 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 340
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 341 VAAMSKDKANMQHRYVELFLNSTA 364
Score = 121 (47.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 40 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 94
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 95 VLKHT-GPNSP 104
Score = 59 (25.8 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 324 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 358
Score = 48 (22.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 285 TTGHCVHMRGLPYRA 299
Score = 38 (18.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 112 VRLRGLPFG--CSKEEIVQFFSG 132
>UNIPROTKB|E9PCY7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 IPI:IPI00908896
ProteinModelPortal:E9PCY7 SMR:E9PCY7 PRIDE:E9PCY7
Ensembl:ENST00000510411 ArrayExpress:E9PCY7 Bgee:E9PCY7
Uniprot:E9PCY7
Length = 429
Score = 243 (90.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>MGI|MGI:1201779 [details] [associations]
symbol:Hnrnph2 "heterogeneous nuclear ribonucleoprotein H2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1201779
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 EMBL:U58105 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 GeneTree:ENSGT00620000087736 KO:K12898
OrthoDB:EOG4CRM03 InterPro:IPR012996 Pfam:PF08080 CTD:3188
EMBL:AK077716 EMBL:AK164115 EMBL:AK168116 EMBL:AK169104
EMBL:BC005461 IPI:IPI00108143 RefSeq:NP_063921.1 UniGene:Mm.315909
ProteinModelPortal:P70333 SMR:P70333 STRING:P70333
PhosphoSite:P70333 PaxDb:P70333 PRIDE:P70333 DNASU:56258
Ensembl:ENSMUST00000050331 Ensembl:ENSMUST00000059297
Ensembl:ENSMUST00000074950 Ensembl:ENSMUST00000113202
Ensembl:ENSMUST00000113203 GeneID:56258 KEGG:mmu:56258
InParanoid:P70333 NextBio:312148 Bgee:P70333 Genevestigator:P70333
GermOnline:ENSMUSG00000045427 Uniprot:P70333
Length = 449
Score = 244 (91.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 198 (74.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 38/101 (37%), Positives = 65/101 (64%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 122 (48.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 EEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>RGD|1549784 [details] [associations]
symbol:Hnrnph2 "heterogeneous nuclear ribonucleoprotein H2 (H')"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:1549784 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 GO:GO:0015629
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 eggNOG:NOG262593
HSSP:P55795 HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3188 OMA:MEANMTI EMBL:BC079240
IPI:IPI00464512 RefSeq:NP_001014041.1 UniGene:Rn.229731
ProteinModelPortal:Q6AY09 SMR:Q6AY09 IntAct:Q6AY09 STRING:Q6AY09
PhosphoSite:Q6AY09 PRIDE:Q6AY09 Ensembl:ENSRNOT00000015518
GeneID:308650 KEGG:rno:308650 UCSC:RGD:1549784 InParanoid:Q6AY09
NextBio:659306 Genevestigator:Q6AY09 Uniprot:Q6AY09
Length = 449
Score = 244 (91.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G GV + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 198 (74.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 38/101 (37%), Positives = 65/101 (64%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A++V+ FF + C + +G GV F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSAEEVMRFF-----SDCKIQNGTSGVRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 122 (48.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E ++ F + GV +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 EEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|E2R8D6 [details] [associations]
symbol:E2R8D6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:AAEX03007686
Ensembl:ENSCAFT00000000520 Uniprot:E2R8D6
Length = 439
Score = 243 (90.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|P31943 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0043484 "regulation of RNA splicing" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0008266 "poly(U) RNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008266 GO:GO:0000166
GO:GO:0015629 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0043484
GO:GO:0000398 GO:GO:0071013 EMBL:CH471165 eggNOG:NOG262593
HOGENOM:HOG000220896 HOVERGEN:HBG055557 EMBL:L22009 EMBL:CR456778
EMBL:AK124530 EMBL:BC001348 IPI:IPI00013881 PIR:I39358
RefSeq:NP_001244222.1 RefSeq:NP_005511.1 UniGene:Hs.604001 PDB:2LXU
PDBsum:2LXU ProteinModelPortal:P31943 SMR:P31943 IntAct:P31943
MINT:MINT-1160934 STRING:P31943 PhosphoSite:P31943 DMDM:1710632
REPRODUCTION-2DPAGE:IPI00013881 REPRODUCTION-2DPAGE:P31943
PaxDb:P31943 PRIDE:P31943 Ensembl:ENST00000356731
Ensembl:ENST00000393432 Ensembl:ENST00000442819 GeneID:3187
KEGG:hsa:3187 UCSC:uc003mke.4 CTD:3187 GeneCards:GC05M179043
HGNC:HGNC:5041 HPA:HPA001359 HPA:HPA016884 MIM:601035
neXtProt:NX_P31943 PharmGKB:PA162391284 KO:K12898 OrthoDB:EOG4CRM03
ChiTaRS:HNRNPH1 GenomeRNAi:3187 NextBio:12670 ArrayExpress:P31943
Bgee:P31943 CleanEx:HS_HNRNPH1 Genevestigator:P31943
GermOnline:ENSG00000169045 InterPro:IPR012996 Pfam:PF08080
Uniprot:P31943
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|F2Z5H9 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0071013 GeneTree:ENSGT00620000087736 CTD:3187
KO:K12898 InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:CU915704
RefSeq:XP_003123691.1 UniGene:Ssc.13767 ProteinModelPortal:F2Z5H9
SMR:F2Z5H9 PRIDE:F2Z5H9 Ensembl:ENSSSCT00000015317 GeneID:100519535
KEGG:ssc:100519535 Uniprot:F2Z5H9
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>RGD|620840 [details] [associations]
symbol:Hnrph1 "heterogeneous nuclear ribonucleoprotein H1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:620840 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0006396 GO:GO:0043484
eggNOG:NOG262593 HSSP:P55795 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 InterPro:IPR012996 Pfam:PF08080
EMBL:AF367468 EMBL:AABR03073723 EMBL:BC129087 IPI:IPI00202027
IPI:IPI00851133 IPI:IPI00851145 RefSeq:NP_543172.1 UniGene:Rn.23677
ProteinModelPortal:Q8VHV7 SMR:Q8VHV7 IntAct:Q8VHV7 STRING:Q8VHV7
PhosphoSite:Q8VHV7 World-2DPAGE:0004:Q8VHV7 PRIDE:Q8VHV7
GeneID:140931 KEGG:rno:140931 UCSC:RGD:620840 CTD:140931
NextBio:620799 ArrayExpress:Q8VHV7 Genevestigator:Q8VHV7
Uniprot:Q8VHV7
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSEEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 192 (72.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 128 (50.1 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIETG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 581 IRLRGLPY 588
+RLRGLP+
Sbjct: 113 VRLRGLPF 120
>UNIPROTKB|Q8VHV7 [details] [associations]
symbol:Hnrnph1 "Heterogeneous nuclear ribonucleoprotein H"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:620840 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0006396 GO:GO:0043484 eggNOG:NOG262593 HSSP:P55795
HOGENOM:HOG000220896 HOVERGEN:HBG055557 KO:K12898
InterPro:IPR012996 Pfam:PF08080 EMBL:AF367468 EMBL:AABR03073723
EMBL:BC129087 IPI:IPI00202027 IPI:IPI00851133 IPI:IPI00851145
RefSeq:NP_543172.1 UniGene:Rn.23677 ProteinModelPortal:Q8VHV7
SMR:Q8VHV7 IntAct:Q8VHV7 STRING:Q8VHV7 PhosphoSite:Q8VHV7
World-2DPAGE:0004:Q8VHV7 PRIDE:Q8VHV7 GeneID:140931 KEGG:rno:140931
UCSC:RGD:620840 CTD:140931 NextBio:620799 ArrayExpress:Q8VHV7
Genevestigator:Q8VHV7 Uniprot:Q8VHV7
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSEEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 192 (72.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 128 (50.1 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIETG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 581 IRLRGLPY 588
+RLRGLP+
Sbjct: 113 VRLRGLPF 120
>MGI|MGI:1891925 [details] [associations]
symbol:Hnrnph1 "heterogeneous nuclear ribonucleoprotein H1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1891925 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 CTD:3187 KO:K12898 OrthoDB:EOG4CRM03
ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080 EMBL:Y14196
EMBL:BC056224 IPI:IPI00133916 RefSeq:NP_067485.1 UniGene:Mm.21740
ProteinModelPortal:O35737 SMR:O35737 IntAct:O35737 STRING:O35737
PhosphoSite:O35737 REPRODUCTION-2DPAGE:IPI00133916
REPRODUCTION-2DPAGE:O35737 PaxDb:O35737 PRIDE:O35737 DNASU:59013
Ensembl:ENSMUST00000069304 Ensembl:ENSMUST00000109142 GeneID:59013
KEGG:mmu:59013 NextBio:314564 Bgee:O35737 Genevestigator:O35737
GermOnline:ENSMUSG00000007850 Uniprot:O35737
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 192 (72.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|G3V9Q3 [details] [associations]
symbol:Hnrph1 "Heterogeneous nuclear ribonucleoprotein H1,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0043484 "regulation of RNA
splicing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:620840 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:CH473948
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
UniGene:Rn.23677 ProteinModelPortal:G3V9Q3 SMR:G3V9Q3 PRIDE:G3V9Q3
Ensembl:ENSRNOT00000059190 Uniprot:G3V9Q3
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 192 (72.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV E
Sbjct: 8 GEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFVELE 62
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 63 SEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|A5D9B4 [details] [associations]
symbol:HNRPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 eggNOG:NOG262593 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 IPI:IPI00696405 UniGene:Bt.8355 OMA:MEANMTI
EMBL:DAAA02070773 EMBL:DAAA02070774 EMBL:BT030533 SMR:A5D9B4
Ensembl:ENSBTAT00000009864 InParanoid:A5D9B4 Uniprot:A5D9B4
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 195 (73.7 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 37/101 (36%), Positives = 64/101 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 124 (48.7 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 118 (46.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 DEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 58 (25.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|Q3SZF3 [details] [associations]
symbol:HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9913 "Bos taurus" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 EMBL:BC102894 IPI:IPI00696405 RefSeq:NP_001069476.1
UniGene:Bt.8355 ProteinModelPortal:Q3SZF3 SMR:Q3SZF3 PRIDE:Q3SZF3
GeneID:534001 KEGG:bta:534001 CTD:3188 InParanoid:Q3SZF3
NextBio:20876226 Uniprot:Q3SZF3
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 195 (73.7 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 37/101 (36%), Positives = 64/101 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 124 (48.7 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 118 (46.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 DEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 58 (25.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|E2RJH5 [details] [associations]
symbol:HNRNPH2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 GeneTree:ENSGT00620000087736 KO:K12898
InterPro:IPR012996 Pfam:PF08080 CTD:3188 OMA:MEANMTI
EMBL:AAEX03026717 RefSeq:XP_861916.1 RefSeq:XP_862053.2
Ensembl:ENSCAFT00000028063 GeneID:480989 KEGG:cfa:480989
Uniprot:E2RJH5
Length = 449
Score = 243 (90.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GMTLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 195 (73.7 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 37/101 (36%), Positives = 64/101 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 124 (48.7 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 342 VAAMAKDKANMQHRYVELFLNSTA 365
Score = 118 (46.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 DEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 58 (25.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|E1BF20 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:DAAA02018972
IPI:IPI00734138 Ensembl:ENSBTAT00000012357 Uniprot:E1BF20
Length = 472
Score = 243 (90.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|G8JLB6 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 ProteinModelPortal:G8JLB6
SMR:G8JLB6 PRIDE:G8JLB6 Ensembl:ENST00000329433 OMA:FSECKIQ
PhylomeDB:G8JLB6 Bgee:G8JLB6 Uniprot:G8JLB6
Length = 472
Score = 243 (90.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 192
Score = 193 (73.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 126 (49.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 341
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 342 VAAMSKDKANMQHRYVELFLNSTA 365
Score = 121 (47.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 325 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL 359
Score = 48 (22.0 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 286 TTGHCVHMRGLPYRA 300
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|F1RUP2 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 OMA:LSFFSDC
EMBL:FP325194 RefSeq:XP_003129120.1 UniGene:Ssc.12808
Ensembl:ENSSSCT00000009793 GeneID:100516986 KEGG:ssc:100516986
Uniprot:F1RUP2
Length = 479
Score = 250 (93.1 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 58/165 (35%), Positives = 97/165 (58%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ G+R G+A++ ++ AL++H+ ++ +RY+EV + N ED +
Sbjct: 177 GENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMK 236
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ ++ + G ++R+RGLPY C K ++DFF AG +++D + FV
Sbjct: 237 NLHVKSTPVVNDG---VVRLRGLPYSCNEKDIVDFF-AGL----HIVD----ITFVMDYR 284
Query: 484 GKA-TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G+ TG+A+V FE+ E A++AL KH+E IG RYIE+F S EV+
Sbjct: 285 GRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVR 329
Score = 181 (68.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR +GLP+ CT + V+ FF + C + +GE G+ F+ DGK GDA + E E++
Sbjct: 150 LIRAQGLPWSCTVEDVLSFF-----SDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQD 204
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
KAL KH+ +G RY+E++ +V ++
Sbjct: 205 VQKALEKHRMYMGQRYVEVYEINNEDVDALM 235
Score = 118 (46.6 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
VE +L F + G+H + N G+ G+A I+M+SE A + +H M G
Sbjct: 162 VEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE-KHR--MYMG- 217
Query: 122 KQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
QRY+EV++ + ED++ ++ + ++P ++
Sbjct: 218 -QRYVEVYEINNEDVDALMKNLHVKSTPVVN 247
Score = 116 (45.9 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 428 EAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKAT 487
EA F T + + MRGLP++ A+ +I+FF A + M+ GKAT
Sbjct: 389 EAVDFGTTSSLHFVHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKAT 439
Query: 488 GDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
G+A V FE E+A A+ K + + RYIELF
Sbjct: 440 GEADVHFETHEDAVAAMLKDRSHVHHRYIELF 471
Score = 80 (33.2 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQA 431
R+ GEA V+F + E + AL +H+ I RYIE+ + + G + + A
Sbjct: 287 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHKGKKMA 341
Score = 64 (27.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
S+ G+ GEA V F E A+ + + H+ RYIE+
Sbjct: 433 SSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIEL 470
Score = 50 (22.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 570 HIITSGTRKD-CIRLRGLPYEALCILMDI--FFVG 601
H+ ++ D +RLRGLPY C DI FF G
Sbjct: 239 HVKSTPVVNDGVVRLRGLPYS--CNEKDIVDFFAG 271
Score = 37 (18.1 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 567 LPQHIITSGTRKDC--IRLRGLPYEA 590
LP+ + GT + +RGLP++A
Sbjct: 387 LPE-AVDFGTTSSLHFVHMRGLPFQA 411
>FB|FBgn0259139 [details] [associations]
symbol:glo "glorund" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS;NAS] [GO:0006417
"regulation of translation" evidence=IMP;NAS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046427 "positive regulation of JAK-STAT cascade"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0043234
"protein complex" evidence=IPI] [GO:0060810 "intracellular mRNA
localization involved in pattern specification process"
evidence=IMP] [GO:0007311 "maternal specification of dorsal/ventral
axis, oocyte, germ-line encoded" evidence=IMP] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051276 "chromosome organization"
evidence=IMP] [GO:0042060 "wound healing" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
EMBL:AE014297 GO:GO:0043234 GO:GO:0006417 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0042060 GO:GO:0046427
GO:GO:0051276 GO:GO:0045451 GO:GO:0007311
GeneTree:ENSGT00620000087828 KO:K12898 FlyBase:FBgn0259139
UniGene:Dm.4997 GeneID:41431 KEGG:dme:Dmel_CG6946 CTD:41431
GenomeRNAi:41431 NextBio:823816 EMBL:AY089465 RefSeq:NP_650120.1
RefSeq:NP_731639.1 SMR:Q9VGH5 IntAct:Q9VGH5 MINT:MINT-293245
STRING:Q9VGH5 EnsemblMetazoa:FBtr0089917 EnsemblMetazoa:FBtr0089919
UCSC:CG6946-RA InParanoid:Q9VGH5 OMA:NFGPIGG Uniprot:Q9VGH5
Length = 586
Score = 247 (92.0 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 60/167 (35%), Positives = 95/167 (56%)
Query: 364 GLGGVALCLSAF-GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVA 422
G G+ L S G+ GEA V QE + A K +K + RYIEV A ++
Sbjct: 77 GSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEA---- 132
Query: 423 GGNNNEAQAFLT-RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
EA ++ G ++++RGLPY T +Q+ +FF + ++ EG+LFV
Sbjct: 133 ----KEAMRKISGHGTAFVVKLRGLPYAVTEQQIEEFF-----SGLDIKTDREGILFVMD 183
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
G+ATG+AFV FE +++ ++AL +++E IG RYIE+FRS+ AE+++
Sbjct: 184 RRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRSSIAEMKR 230
Score = 172 (65.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 35/93 (37%), Positives = 58/93 (62%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGV-LFVKKPDGKATGDAFVLFEKEEE 499
+R+RGLP+ T K+++DF E + NV +G G+ L + DGK TG+A+V +E+
Sbjct: 51 VRLRGLPWSATHKEILDFLE-----NVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQED 105
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNK 532
++A +K S+G RYIE+F +T E ++ + K
Sbjct: 106 VEEARKLNKASMGHRYIEVFTATPKEAKEAMRK 138
Score = 117 (46.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 39/111 (35%), Positives = 51/111 (45%)
Query: 414 NGEDFI--NVAGGNNNEAQAFLTRGAQV---IIRMRGLPYECTAKQVIDFFEAGTENSCN 468
NG +F N GG N RG + I MRGLPY V FFE N
Sbjct: 451 NGSNFGGGNSMGGGGNFGPIGGGRGNDIEYYTIHMRGLPYTSFENDVFKFFEP--IRPAN 508
Query: 469 VMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
V + + KK T DA+ F+ E++ A+ +H+E +G RYIELF
Sbjct: 509 VR-----INYNKKGLHSGTADAY--FDTYEDSQVAMKRHREQMGSRYIELF 552
Score = 85 (35.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 60 VLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIF 119
V + I EF +G+ V + +G+ +GEAF+Q +S+ A L NR I
Sbjct: 157 VTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQA--LGRNREKI- 213
Query: 120 GKKQRYIEVFQCSGEDM 136
G RYIE+F+ S +M
Sbjct: 214 G--HRYIEIFRSSIAEM 228
Score = 43 (20.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 581 IRLRGLPYEALCILMDIFFVG 601
++LRGLPY ++ FF G
Sbjct: 148 VKLRGLPYAVTEQQIEEFFSG 168
>UNIPROTKB|F1NBV8 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00589313
Ensembl:ENSGALT00000009575 ArrayExpress:F1NBV8 Uniprot:F1NBV8
Length = 492
Score = 239 (89.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 61/166 (36%), Positives = 93/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++
Sbjct: 69 GALGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 128
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 129 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 176
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 177 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 222
Score = 181 (68.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 33/94 (35%), Positives = 59/94 (62%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 42 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 96
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL K +E++G RY+E+F+S E+ VL T
Sbjct: 97 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 130
Score = 126 (49.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 314 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 364
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 365 VAAMSKDKANMQHRYVELFLNSTA 388
Score = 113 (44.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + G RY+EVF+ + +M+ V
Sbjct: 72 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDWV 126
Query: 140 LNGVLPPTSP 149
L P SP
Sbjct: 127 LKHT-GPNSP 135
Score = 65 (27.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F E A+ + K ++ RY+E+ F+N G A
Sbjct: 348 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL-------FLNSTAGGTGGAYGSQMM 400
Query: 436 GAQV 439
GA V
Sbjct: 401 GAMV 404
Score = 48 (22.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 309 TTGHCVHMRGLPYRA 323
Score = 38 (18.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 143 VRLRGLPFG--CSKEEIVQFFSG 163
>UNIPROTKB|F1NJJ4 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00684493
Ensembl:ENSGALT00000034274 ArrayExpress:F1NJJ4 Uniprot:F1NJJ4
Length = 499
Score = 239 (89.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 61/166 (36%), Positives = 93/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++
Sbjct: 69 GALGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 128
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 129 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 176
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 177 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 222
Score = 181 (68.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 33/94 (35%), Positives = 59/94 (62%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 42 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 96
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL K +E++G RY+E+F+S E+ VL T
Sbjct: 97 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 130
Score = 126 (49.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 321 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 371
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 372 VAAMSKDKANMQHRYVELFLNSTA 395
Score = 113 (44.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + G RY+EVF+ + +M+ V
Sbjct: 72 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDWV 126
Query: 140 LNGVLPPTSP 149
L P SP
Sbjct: 127 LKHT-GPNSP 135
Score = 65 (27.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F E A+ + K ++ RY+E+ F+N G A
Sbjct: 355 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL-------FLNSTAGGTGGAYGSQMM 407
Query: 436 GAQV 439
GA V
Sbjct: 408 GAMV 411
Score = 48 (22.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 316 TTGHCVHMRGLPYRA 330
Score = 38 (18.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 143 VRLRGLPFG--CSKEEIVQFFSG 163
>UNIPROTKB|F1NJJ5 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00679403
Ensembl:ENSGALT00000034273 ArrayExpress:F1NJJ5 Uniprot:F1NJJ5
Length = 519
Score = 239 (89.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 61/166 (36%), Positives = 93/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++
Sbjct: 89 GALGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 148
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 149 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 196
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 197 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 242
Score = 181 (68.8 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 33/94 (35%), Positives = 59/94 (62%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 62 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 116
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL K +E++G RY+E+F+S E+ VL T
Sbjct: 117 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 150
Score = 126 (49.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 341 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 391
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 392 VAAMSKDKANMQHRYVELFLNSTA 415
Score = 113 (44.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + G RY+EVF+ + +M+ V
Sbjct: 92 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDWV 146
Query: 140 LNGVLPPTSP 149
L P SP
Sbjct: 147 LKHT-GPNSP 155
Score = 65 (27.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F E A+ + K ++ RY+E+ F+N G A
Sbjct: 375 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL-------FLNSTAGGTGGAYGSQMM 427
Query: 436 GAQV 439
GA V
Sbjct: 428 GAMV 431
Score = 48 (22.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 336 TTGHCVHMRGLPYRA 350
Score = 38 (18.4 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 163 VRLRGLPFG--CSKEEIVQFFSG 183
>UNIPROTKB|F1NEG6 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:AADN02028603
EMBL:AADN02028604 EMBL:AADN02028605 EMBL:AADN02028590
EMBL:AADN02028591 EMBL:AADN02028592 EMBL:AADN02028593
EMBL:AADN02028594 EMBL:AADN02028595 EMBL:AADN02028596
EMBL:AADN02028597 EMBL:AADN02028598 EMBL:AADN02028599
EMBL:AADN02028600 EMBL:AADN02028601 EMBL:AADN02028602
IPI:IPI00823306 Ensembl:ENSGALT00000040330 ArrayExpress:F1NEG6
Uniprot:F1NEG6
Length = 521
Score = 239 (89.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 61/166 (36%), Positives = 93/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA +E +ALK+ + + RY+EV K+N D++
Sbjct: 89 GALGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 148
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 149 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 196
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 197 FQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 242
Score = 181 (68.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 33/94 (35%), Positives = 59/94 (62%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++++RGLP+ C+ ++V FF + C +++G G+ F+ +G+ +G+AF E EE+
Sbjct: 62 VVKVRGLPWSCSTEEVQRFF-----SDCKILNGALGIRFIYTREGRPSGEAFAELESEED 116
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
AL K +E++G RY+E+F+S E+ VL T
Sbjct: 117 VKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 150
Score = 126 (49.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 343 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 393
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 394 VAAMSKDKANMQHRYVELFLNSTA 417
Score = 113 (44.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
G+ +Y +G+PSGEAF +++SE LA L+ +R + G RY+EVF+ + +M+ V
Sbjct: 92 GIRFIYTREGRPSGEAFAELESEEDVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDWV 146
Query: 140 LNGVLPPTSP 149
L P SP
Sbjct: 147 LKHT-GPNSP 155
Score = 65 (27.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
GR GEA V F E A+ + K ++ RY+E+ F+N G A
Sbjct: 377 GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVEL-------FLNSTAGGTGGAYGSQMM 429
Query: 436 GAQV 439
GA V
Sbjct: 430 GAMV 433
Score = 48 (22.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 338 TTGHCVHMRGLPYRA 352
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 163 VRLRGLPFG--CSKEEIVQFFSG 183
>ZFIN|ZDB-GENE-030131-275 [details] [associations]
symbol:hnrnph1l "heterogeneous nuclear
ribonucleoprotein H1, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-275
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 EMBL:BC044161 IPI:IPI00512644 RefSeq:NP_997754.1
UniGene:Dr.782 ProteinModelPortal:Q803W8 SMR:Q803W8 STRING:Q803W8
PRIDE:Q803W8 GeneID:321556 KEGG:dre:321556 CTD:321556
InParanoid:Q803W8 NextBio:20807425 ArrayExpress:Q803W8 Bgee:Q803W8
Uniprot:Q803W8
Length = 407
Score = 232 (86.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 57/155 (36%), Positives = 90/155 (58%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDF---INVAGGNNNEAQAF 432
GR +GEA V ++ +A+K+ + + RY+EV K+N + + G N E
Sbjct: 47 GRPSGEAFVELESEDDLKIAVKKDRESMGHRYVEVFKSNNVEMDWVLKHTGPNCPE---- 102
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G ++R+RGLP+ C+ ++++ FF +G E N G+ G++TG+AFV
Sbjct: 103 -TEG-DGLVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVDFQGRSTGEAFV 153
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
F ++ A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 154 QFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVR 188
Score = 170 (64.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 33/94 (35%), Positives = 56/94 (59%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+A++V FF + C + + F +G+ +G+AFV E E++
Sbjct: 8 VVRVRGLPWSCSAEEVSRFF-----SGCKISSNGSAIHFTYTREGRPSGEAFVELESEDD 62
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
A+ K +ES+G RY+E+F+S E+ VL T
Sbjct: 63 LKIAVKKDRESMGHRYVEVFKSNNVEMDWVLKHT 96
Score = 120 (47.3 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 256 VHMRGLPYRATEPDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 306
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+S K ++ RY+ELF ++TA
Sbjct: 307 VAAMSNDKANMQHRYVELFLNSTA 330
Score = 105 (42.0 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 81 VHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVL 140
+H Y +G+PSGEAF++++SE +A + + +M G RY+EVF+ + +M+ VL
Sbjct: 39 IHFTYTREGRPSGEAFVELESEDDLKIAVK-KDRESM--G--HRYVEVFKSNNVEMDWVL 93
Query: 141 NGVLP 145
P
Sbjct: 94 KHTGP 98
Score = 104 (41.7 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F Q+ + ALK+HK I RYIE+ K++
Sbjct: 136 GITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSS 183
Score = 81 (33.6 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A + +H + G
Sbjct: 121 EEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALK-KHKERI--G-- 173
Query: 123 QRYIEVFQCS 132
RYIE+F+ S
Sbjct: 174 HRYIEIFKSS 183
Score = 64 (27.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN-VAGGNN 426
GR GEA V F E A+ K ++ RY+E+ F+N AGG+N
Sbjct: 290 GRVTGEADVEFATHEDAVAAMSNDKANMQHRYVEL-------FLNSTAGGSN 334
Score = 48 (22.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 251 TTGHCVHMRGLPYRA 265
Score = 38 (18.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 109 VRLRGLPFG--CSKEEIVQFFSG 129
>UNIPROTKB|I3L687 [details] [associations]
symbol:HNRNPH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:MEANMTI
Ensembl:ENSSSCT00000030700 Uniprot:I3L687
Length = 437
Score = 195 (73.7 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 37/101 (36%), Positives = 64/101 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V+ FF + C + +G G+ F+ +G+ +G+AFV
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFF-----SDCKIQNGTSGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S + E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHT 100
Score = 127 (49.8 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GTSGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTE 464
G N+ A G +R+RGLP+ C+ ++++ FF +G E
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLE 135
Score = 124 (48.7 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 279 VHMRGLPYRATENDIYNFFSPLNPMRVHIEIG---------PDGRVTGEADVEFATHEDA 329
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A++K K ++ RY+ELF ++TA
Sbjct: 330 VAAMAKDKANMQHRYVELFLNSTA 353
Score = 120 (47.3 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 489 DAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 142 EAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 180
Score = 118 (46.6 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
+ ++ F + G+ +Y +G+PSGEAF++++SE LA L+ +R + G
Sbjct: 25 DEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G-- 79
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 80 HRYVEVFKSNSVEMDWVLKHT-GPNSP 105
Score = 88 (36.0 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 379 NG-EAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
NG EA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 139 NGXEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 175
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV 410
GR GEA V F E A+ + K ++ RY+E+
Sbjct: 313 GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVEL 347
Score = 54 (24.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 91 PSG-EAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCS 132
P+G EAF+Q S+ A A + +H + G RYIE+F+ S
Sbjct: 138 PNGXEAFVQFASQEIAEKALK-KHKERI--G--HRYIEIFKSS 175
Score = 48 (22.0 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 274 TTGHCVHMRGLPYRA 288
Score = 38 (18.4 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|F1LV61 [details] [associations]
symbol:F1LV61 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
IPI:IPI00952226 ProteinModelPortal:F1LV61
Ensembl:ENSRNOT00000020819 Uniprot:F1LV61
Length = 408
Score = 230 (86.0 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN--GEDFINV 421
G+ GV + GR++GEA V+ +E +ALK + + RYIEV K + G D++
Sbjct: 40 GVVGVHFIYTREGRQSGEAFVKPESEEDVKLALKEDRESMGHRYIEVFKPHRTGMDWVLK 99
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G + ++GLP CT ++ I FF +G E V +G +++
Sbjct: 100 RSGPNSAYSA--NDG---FVSLQGLPCGCTKEEAIQFF-SGLEI---VPNGNTLPVYL-- 148
Query: 482 PDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+GK TG+AFV F +E A+KA KHKE IG RYIE+F+S+ EV+
Sbjct: 149 -EGKITGEAFVQFASQELAEKAFGKHKERIGHRYIEVFKSSQEEVR 193
Score = 157 (60.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 33/98 (33%), Positives = 57/98 (58%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G ++++ GLP+ C+ +V +F + C + DG GV F+ +G+ +G+AFV E
Sbjct: 9 GEGYVVKLLGLPWSCSIPEVQNFL-----SDCTIHDGVVGVHFIYTREGRQSGEAFVKPE 63
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
EE+ AL + +ES+G RYIE+F+ + VL ++
Sbjct: 64 SEEDVKLALKEDRESMGHRYIEVFKPHRTGMDWVLKRS 101
Score = 105 (42.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 62 VEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGK 121
+ + FL + + GVH +Y +G+ SGEAF++ +SE LA L+ +R + G
Sbjct: 25 IPEVQNFLSDCTIHDGVVGVHFIYTREGRQSGEAFVKPESEEDVKLA--LKEDRESM-G- 80
Query: 122 KQRYIEVFQCSGEDMNLVL 140
RYIEVF+ M+ VL
Sbjct: 81 -HRYIEVFKPHRTGMDWVL 98
Score = 104 (41.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ RGLPY+ T + +FF N V E G PDG+ TG+A F EEA
Sbjct: 291 VHTRGLPYKATENDIYNFFSP--LNPVRVHT-EIG------PDGRVTGEADAEFATHEEA 341
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK + ++ RYI+LF ++T
Sbjct: 342 VAAMSKDR-AMQHRYIQLFLNST 363
Score = 45 (20.9 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 580 CIRLRGLPYEA 590
C+ RGLPY+A
Sbjct: 290 CVHTRGLPYKA 300
>ZFIN|ZDB-GENE-060825-196 [details] [associations]
symbol:grsf1 "G-rich RNA sequence binding factor 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060825-196 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:BX323596 GeneTree:ENSGT00620000087736
IPI:IPI01023901 ProteinModelPortal:F8W4V6
Ensembl:ENSDART00000149868 ArrayExpress:F8W4V6 Bgee:F8W4V6
Uniprot:F8W4V6
Length = 403
Score = 230 (86.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 52/156 (33%), Positives = 87/156 (55%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G+ GV + + +G+ +G+A + +E AL +H+H++ R+IEV + +D +
Sbjct: 143 GVNGVHILYNKYGKPSGQAFIELEHEEDVGKALDQHRHYLRDRFIEVREVTNKDAEAILK 202
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + ++R+RGLPY CT +I FF +G + V+ E+GV +
Sbjct: 203 ASKERVET------DTVVRLRGLPYSCTEGDIIRFF-SGLD----VV--EDGVTIILNRR 249
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
GK++GDAFV F + A+KAL K +E +G RYIE+F
Sbjct: 250 GKSSGDAFVEFATKAMAEKALKKDREILGNRYIEIF 285
Score = 157 (60.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA--NGEDFINVAGG 424
GV + L+ G+ +G+A V F + + ALK+ + + RYIE+ A + N +
Sbjct: 241 GVTIILNRRGKSSGDAFVEFATKAMAEKALKKDREILGNRYIEIFPAMKSAIPSQNRSWQ 300
Query: 425 NNN----EAQAFLTRGAQV---IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVL 477
N+ A+ R V +I MRGLP++ A+ ++ FF +M V+
Sbjct: 301 NDRVFTPRAEDPPLRNTTVTKNVIHMRGLPFDAKAEDIVKFFAP-----VRLMK----VV 351
Query: 478 FVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF 519
P+GK TG+A F+ E+A A+SK +E I RYIEL+
Sbjct: 352 VEFGPEGKPTGEAEAYFKTHEDAVLAMSKDREFIMERYIELY 393
Score = 155 (59.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
I++ +GLP+ CTA+ ++ FF + C + G GV + GK +G AF+ E EE+
Sbjct: 116 IVQAKGLPWSCTAEDIMSFF-----SECRIRGGVNGVHILYNKYGKPSGQAFIELEHEED 170
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTME 535
KAL +H+ + R+IE+ T + + +L + E
Sbjct: 171 VGKALDQHRHYLRDRFIEVREVTNKDAEAILKASKE 206
Score = 112 (44.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I+ F E GVH++YN G+PSG+AFI++ EH + L +R+ + +
Sbjct: 129 EDIMSFFSECRIRGGVNGVHILYNKYGKPSGQAFIEL--EHEEDVGKALDQHRHYL---R 183
Query: 123 QRYIEVFQCSGEDMNLVL 140
R+IEV + + +D +L
Sbjct: 184 DRFIEVREVTNKDAEAIL 201
Score = 47 (21.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLPY C DI FF G
Sbjct: 214 VRLRGLPYS--CTEGDIIRFFSG 234
Score = 42 (19.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 578 KDCIRLRGLPYEA 590
K+ I +RGLP++A
Sbjct: 321 KNVIHMRGLPFDA 333
>UNIPROTKB|E7EN40 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00981333
ProteinModelPortal:E7EN40 SMR:E7EN40 Ensembl:ENST00000523137
ArrayExpress:E7EN40 Bgee:E7EN40 Uniprot:E7EN40
Length = 166
Score = 164 (62.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 31/85 (36%), Positives = 54/85 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIE 517
E E+E AL K +E++G RY+E
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVE 84
Score = 140 (54.3 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 101 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 144
Score = 110 (43.8 bits), Expect = 0.00034, P = 0.00034
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 358 GYEQVLGL----GGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKA 413
G+ V GL G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K+
Sbjct: 79 GHRYVEGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 138
Query: 414 N 414
+
Sbjct: 139 S 139
Score = 94 (38.1 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+E G + +
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVE-----G--LEI 88
Query: 139 VLNGVLPP 146
V NG+ P
Sbjct: 89 VPNGITLP 96
Score = 67 (28.6 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIE 409
G G+ + GR +GEA V ++ +ALK+ + + RY+E
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVE 84
>UNIPROTKB|D6RIU0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00967216
ProteinModelPortal:D6RIU0 SMR:D6RIU0 Ensembl:ENST00000504348
ArrayExpress:D6RIU0 Bgee:D6RIU0 Uniprot:D6RIU0
Length = 168
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 161 (61.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEEEADKA 503
G++TG+AFV F +E A+KA
Sbjct: 147 FQGRSTGEAFVQFASQEIAEKA 168
Score = 121 (47.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|D6RFM3 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
HOGENOM:HOG000134241 IPI:IPI00965435 ProteinModelPortal:D6RFM3
SMR:D6RFM3 Ensembl:ENST00000513225 ArrayExpress:D6RFM3 Bgee:D6RFM3
Uniprot:D6RFM3
Length = 163
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 149 (57.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKK 481
G N+ A G +R+RGLP+ C+ ++++ FF +G E N G+
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGLEIVPN------GITLPVD 146
Query: 482 PDGKATGDAFVLFEKEE 498
G++TG+AFV F +E
Sbjct: 147 FQGRSTGEAFVQFASQE 163
Score = 121 (47.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|D6R9T0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00964846
ProteinModelPortal:D6R9T0 SMR:D6R9T0 Ensembl:ENST00000510431
HOGENOM:HOG000134241 ArrayExpress:D6R9T0 Bgee:D6R9T0 Uniprot:D6R9T0
Length = 162
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 123 (48.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
G N+ A G +R+RGLP+ C+ ++++ FF
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF 131
Score = 121 (47.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|D6RDU3 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00968132
ProteinModelPortal:D6RDU3 SMR:D6RDU3 Ensembl:ENST00000506721
ArrayExpress:D6RDU3 Bgee:D6RDU3 Uniprot:D6RDU3
Length = 171
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 123 (48.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
G N+ A G +R+RGLP+ C+ ++++ FF
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF 131
Score = 121 (47.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|D6RIH9 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00966018
ProteinModelPortal:D6RIH9 SMR:D6RIH9 Ensembl:ENST00000510678
ArrayExpress:D6RIH9 Bgee:D6RIH9 Uniprot:D6RIH9
Length = 184
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
G N+ A G +R+RGLP+ C+ ++++ FF
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF 131
Score = 121 (47.7 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|D6RJ04 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00963924
ProteinModelPortal:D6RJ04 SMR:D6RJ04 Ensembl:ENST00000508103
ArrayExpress:D6RJ04 Bgee:D6RJ04 Uniprot:D6RJ04
Length = 172
Score = 193 (73.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 123 (48.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFF 459
G N+ A G +R+RGLP+ C+ ++++ FF
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF 131
Score = 121 (47.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 38 (18.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSG 133
>UNIPROTKB|D6RAM1 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00967835
ProteinModelPortal:D6RAM1 SMR:D6RAM1 Ensembl:ENST00000515158
ArrayExpress:D6RAM1 Bgee:D6RAM1 Uniprot:D6RAM1
Length = 130
Score = 193 (73.0 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 121 (47.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 117 (46.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDF 458
G N+ A G +R+RGLP+ C+ ++++ F
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQF 130
Score = 37 (18.1 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 581 IRLRGLPY 588
+RLRGLP+
Sbjct: 113 VRLRGLPF 120
>ZFIN|ZDB-GENE-060421-3878 [details] [associations]
symbol:zgc:136953 "zgc:136953" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060421-3878 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 GeneTree:ENSGT00620000087736 OMA:PYDRPLG
OrthoDB:EOG49P9ZV EMBL:BX530068 IPI:IPI00485717 UniGene:Dr.76052
Ensembl:ENSDART00000057651 Ensembl:ENSDART00000113082
Uniprot:B8A5E1
Length = 396
Score = 222 (83.2 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 56/167 (33%), Positives = 90/167 (53%)
Query: 362 VLG-LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFIN 420
++G + GV S GR +GEA V E AL + + ++ RYIEV ++N +
Sbjct: 33 IVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKALAKDRKYMGHRYIEVFRSNRSEMDW 92
Query: 421 VAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
V + ++R+RGLP+ C+ ++++ FF +G + N G+
Sbjct: 93 VL---KRSGPTDYDGSSGCMLRLRGLPFGCSKEEIVQFF-SGLKIVPN------GITLPM 142
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ E++
Sbjct: 143 DYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSRNEMR 189
Score = 180 (68.4 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 35/94 (37%), Positives = 60/94 (63%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ CT ++V FF + C+++ GV F +G+ +G+AFV + E+
Sbjct: 9 VVRIRGLPWSCTQEEVASFF-----SDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSED 63
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
KAL+K ++ +G RYIE+FRS +E+ VL ++
Sbjct: 64 FKKALAKDRKYMGHRYIEVFRSNRSEMDWVLKRS 97
Score = 124 (48.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
G +N++ + G + MRGLP+ T V FF T ++ G P+
Sbjct: 277 GYSNDSNSGFHSGH--FVHMRGLPFRATESDVAHFFGPLTPVRVHIDMG---------PN 325
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTA 524
GK+TG+A V F E+A A+SK K + RYIELF ++T+
Sbjct: 326 GKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYIELFLNSTS 366
Score = 88 (36.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 80 GVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLV 139
GV ++ +G+PSGEAF+++ S + A + + M G RYIEVF+ + +M+ V
Sbjct: 39 GVCFTFSKEGRPSGEAFVELKSSED-FKKALAKDRKYM--G--HRYIEVFRSNRSEMDWV 93
Query: 140 L 140
L
Sbjct: 94 L 94
Score = 83 (34.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A +H + G
Sbjct: 122 EEIVQFFSGL--KIVPNGITLPMDYQGRSTGEAFVQFASKEIAEKALG-KHKERI--G-- 174
Query: 123 QRYIEVFQCSGEDM 136
RYIE+F+ S +M
Sbjct: 175 HRYIEIFKSSRNEM 188
Score = 75 (31.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAGGNNNEAQAF 432
G+ GEA V F E A+ + K+H+ RYIE+ + ++G + GG + +
Sbjct: 326 GKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYIELFLNSTSSGPSEMGRGGGFYSSSGGM 385
Query: 433 LTRGA 437
+RG+
Sbjct: 386 SSRGS 390
Score = 37 (18.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 110 LRLRGLPFG--CSKEEIVQFFSG 130
>UNIPROTKB|G3N1Y9 [details] [associations]
symbol:G3N1Y9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
EMBL:DAAA02057210 Ensembl:ENSBTAT00000065958 Uniprot:G3N1Y9
Length = 426
Score = 218 (81.8 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 55/164 (33%), Positives = 88/164 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + GR++G+A V ++ +ALK+ + + RYIEV K+N D V
Sbjct: 37 GAQGIRFIYTREGRQSGKAFVELESEDEVKVALKKDRETMGPRYIEVFKSNNADMDWVLE 96
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
+ + G +R+ GLP+ C+ ++++ FF AG E N G+
Sbjct: 97 HTGPHSPDTASDG---FVRLSGLPFGCSKEEMVQFF-AGLEIVPN------GITLQVDMQ 146
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
++TG+AFV F +E A+ AL KHKE IG RY+ +F+S+ AEV+
Sbjct: 147 RRSTGEAFVWFASQEIAEMALKKHKERIGRRYMGIFKSSRAEVR 190
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 37/101 (36%), Positives = 61/101 (60%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + + ++R LP+ C+A +V FF+ C + +G +G+ F+ +G+ +G AFV
Sbjct: 4 TEGGEGFVAKVRSLPWSCSADEVQQFFD------CKIQNGAQGIRFIYTREGRQSGKAFV 57
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RYIE+F+S A++ VL T
Sbjct: 58 ELESEDEVKVALKKDRETMGPRYIEVFKSNNADMDWVLEHT 98
Score = 112 (44.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+ SG+AF++++SE +A L+ +R + G RYIEVF+ + DM+
Sbjct: 39 QGIRFIYTREGRQSGKAFVELESEDEVKVA--LKKDRETM-GP--RYIEVFKSNNADMDW 93
Query: 139 VLNGVLPPTSPAISPVGKTLLS 160
VL P SP + G LS
Sbjct: 94 VLEHT-GPHSPDTASDGFVRLS 114
Score = 61 (26.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRS 521
+G+ TG+A V F E+A A SK K ++ Y ELF S
Sbjct: 311 NGRVTGEADVEFATHEDAVAATSKDKANMHHMY-ELFDS 348
Score = 49 (22.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHK---HHIDKRYIEVTKANGEDFIN 420
GR GEA V F E A + K HH+ + + A+G + N
Sbjct: 312 GRVTGEADVEFATHEDAVAATSKDKANMHHMYELFDSAAGASGGAYAN 359
>UNIPROTKB|D6RIT2 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
HOGENOM:HOG000134241 IPI:IPI00966932 ProteinModelPortal:D6RIT2
SMR:D6RIT2 Ensembl:ENST00000503105 ArrayExpress:D6RIT2 Bgee:D6RIT2
Uniprot:D6RIT2
Length = 164
Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPKXXXXXXXXXXXXAQ 552
E E+E AL K +E++G RY+E+F+S E+ VL T P
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTG--PNSPDTANDGFVRLRG 117
Query: 553 QPMLSHLAQVPVPY--LPQHIITSG------TRKDCIRLRGLPYEA 590
P ++ + + H G T C+ +RGLPY A
Sbjct: 118 LPFGCSKEEIVQFFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRA 163
Score = 124 (48.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINV 421
G G+ + GR +GEA V ++ +ALK+ + + RY+EV K+N D++
Sbjct: 39 GAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98
Query: 422 AGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTEN 465
G N+ A G +R+RGLP+ C+ ++++ FF +++
Sbjct: 99 HTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFFSGMSDH 137
Score = 121 (47.7 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
Score = 44 (20.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 581 IRLRGLPYEALCILMDI--FFVGQQD 604
+RLRGLP+ C +I FF G D
Sbjct: 113 VRLRGLPFG--CSKEEIVQFFSGMSD 136
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 441 IRMRGLPYECT 451
+ MRGLPY T
Sbjct: 154 VHMRGLPYRAT 164
>UNIPROTKB|E7EQJ0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00977852
ProteinModelPortal:E7EQJ0 SMR:E7EQJ0 Ensembl:ENST00000521116
ArrayExpress:E7EQJ0 Bgee:E7EQJ0 Uniprot:E7EQJ0
Length = 115
Score = 193 (73.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 37/101 (36%), Positives = 63/101 (62%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 100
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 79 QGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNL 138
QG+ +Y +G+PSGEAF++++SE LA L+ +R + G RY+EVF+ + +M+
Sbjct: 41 QGIRFIYTREGRPSGEAFVELESEDEVKLA--LKKDRETM-G--HRYVEVFKSNNVEMDW 95
Query: 139 VLNGVLPPTSP 149
VL P SP
Sbjct: 96 VLKHT-GPNSP 105
>UNIPROTKB|E5RGV0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00974526
ProteinModelPortal:E5RGV0 SMR:E5RGV0 Ensembl:ENST00000519056
ArrayExpress:E5RGV0 Bgee:E5RGV0 Uniprot:E5RGV0
Length = 155
Score = 185 (70.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 48/125 (38%), Positives = 73/125 (58%)
Query: 405 KRYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAG 462
+R+ V K+N D++ G N+ A G +R+RGLP+ C+ ++++ FF +G
Sbjct: 28 QRFFSVFKSNNVEMDWVLKHTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SG 81
Query: 463 TENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRST 522
E N G+ G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+
Sbjct: 82 LEIVPN------GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 135
Query: 523 TAEVQ 527
AEV+
Sbjct: 136 RAEVR 140
Score = 107 (42.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 88 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 135
Score = 41 (19.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 123 QRYIEVFQCSGEDMNLVLNGVLPPTSP 149
QR+ VF+ + +M+ VL P SP
Sbjct: 28 QRFFSVFKSNNVEMDWVLKHT-GPNSP 53
>UNIPROTKB|Q9NTZ6 [details] [associations]
symbol:RBM12 "RNA-binding protein 12" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
EMBL:CH471077 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AL109827 UniGene:Hs.700188 GermOnline:ENSG00000125976
eggNOG:NOG299235 HOVERGEN:HBG057691 EMBL:AJ289772 EMBL:AF345332
EMBL:AF345335 EMBL:AF393214 EMBL:AB018308 EMBL:AK092239
EMBL:BC012787 EMBL:BC013981 EMBL:AL834472 EMBL:AB015336
IPI:IPI00550308 RefSeq:NP_001185767.1 RefSeq:NP_001185769.1
RefSeq:NP_006038.2 RefSeq:NP_690051.1 PDB:1WEL PDB:2CPY PDB:2DNN
PDB:2EK1 PDB:2EK6 PDBsum:1WEL PDBsum:2CPY PDBsum:2DNN PDBsum:2EK1
PDBsum:2EK6 ProteinModelPortal:Q9NTZ6 SMR:Q9NTZ6 IntAct:Q9NTZ6
MINT:MINT-1366084 STRING:Q9NTZ6 PhosphoSite:Q9NTZ6 DMDM:30173387
PaxDb:Q9NTZ6 PeptideAtlas:Q9NTZ6 PRIDE:Q9NTZ6 DNASU:10137
Ensembl:ENST00000359646 Ensembl:ENST00000374104
Ensembl:ENST00000374114 GeneID:10137 KEGG:hsa:10137 UCSC:uc002xdq.3
CTD:10137 GeneCards:GC20M034236 HGNC:HGNC:9898 HPA:HPA043258
HPA:HPA043621 MIM:607179 neXtProt:NX_Q9NTZ6 PharmGKB:PA34261
InParanoid:Q9NTZ6 OMA:PVFLGPL OrthoDB:EOG44TP7C PhylomeDB:Q9NTZ6
EvolutionaryTrace:Q9NTZ6 GenomeRNAi:10137 NextBio:38349
ArrayExpress:Q9NTZ6 Bgee:Q9NTZ6 CleanEx:HS_RBM12
Genevestigator:Q9NTZ6 Uniprot:Q9NTZ6
Length = 932
Score = 132 (51.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F E +
Sbjct: 432 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNEADY 484
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 485 KAALCRHKQYMGNRFIQV 502
Score = 131 (51.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 51/169 (30%), Positives = 78/169 (46%)
Query: 261 IPTNLPALPAVPTSG----GYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPK 316
+P+ P P P SG P LP MN + PMN N+ M + P + P
Sbjct: 229 VPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGA--PMNLNN--NLNPMFLGP-LNPV 283
Query: 317 FPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFG 376
P+ Q+N +V P P NP L V + S + N + + L + V L G
Sbjct: 284 NPI-QMNSQSSVK--PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVG 340
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
R NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 341 RNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 81 (33.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+I+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 857 VIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 909
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 910 ATAAVIDLNDRPIGSRKVKL 929
Score = 71 (30.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
+F + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 DFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 376
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + V G + P G+T P LP S P
Sbjct: 377 AT--ERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSP 414
Score = 70 (29.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 35/128 (27%), Positives = 49/128 (38%)
Query: 225 LNKPHNMA-LNGHTPTLIXXXXXXXXXXXXXXXKST----TIPTNLPALPAVPTSGGYFP 279
+N P ++ N +P+++ ST T P N+ A PT P
Sbjct: 117 VNLPTTVSNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPNMGASFGSPTFSSTVP 176
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
P MNT + P P MP +P P + P PV P V T+P P PV
Sbjct: 177 STASP--MNT---VPPPPIPPIPAMPSLPPMPSI-PPIPV-----PPPVPTLP-PVPPVP 224
Query: 340 LCPLVQNI 347
P V ++
Sbjct: 225 PIPPVPSV 232
Score = 52 (23.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 228 PHNMALNGHTPTLIXXXXXXXXXXXXXXXKSTTIPTNLPALPAVPTSGGYFPQFQLPINM 287
P NM + +PT IP +PA+P++P P +P +
Sbjct: 159 PPNMGASFGSPTF--SSTVPSTASPMNTVPPPPIPP-IPAMPSLPPMPS-IPPIPVPPPV 214
Query: 288 NTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVAL 340
T L P+ P +P +P P V P P+ ++ P + P P +
Sbjct: 215 PT---LPPV-PP----VPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAPLPAGM 259
Score = 39 (18.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 144 LPPTSPAISPVGKTLLSP--GMLPHSSQPLYP 173
+PP P++ P+ T L P GM P + P+ P
Sbjct: 226 IPPV-PSVPPM--TPLPPMSGMPPLNPPPVAP 254
>UNIPROTKB|E1BMP6 [details] [associations]
symbol:E1BMP6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
EMBL:DAAA02072842 IPI:IPI00699769 ProteinModelPortal:E1BMP6
Ensembl:ENSBTAT00000027332 Uniprot:E1BMP6
Length = 415
Score = 197 (74.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 59/178 (33%), Positives = 97/178 (54%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRD--MALKRHKHHIDKRYIEVTKANGEDF--- 418
G+ V S GR++GE F++ + D MALK+ + + YIEV K++ +
Sbjct: 39 GVTCVHFIYSTEGRQSGELHQLFLELQSDDVKMALKKDRVSMGHWYIEVFKSHRTEMELV 98
Query: 419 INVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLF 478
+ +G N+ ++ + +R+RGLP+ CT + +I FF +G E +M +
Sbjct: 99 LKHSGPNSGDSSS------DGFVRLRGLPFGCT-EDIIQFF-SGLE----IMPNR--ITL 144
Query: 479 VKKPDGKATGDAFVLFEKEEEADKALSKHKESI-GIRYIELFRSTTAEVQQVLNKTME 535
P+GK TG+AFV F +E A+KAL K+K+ I G RYIE+F S+ V+ L+ ++
Sbjct: 145 PVDPEGKTTGEAFVQFASQELAEKALGKNKKRIIGHRYIEVFNSSQEGVRSYLDPPLK 202
Score = 129 (50.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 30/93 (32%), Positives = 54/93 (58%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF-E-KE 497
++++ GLP+ C+ K V +F ++C + DG V F+ +G+ +G+ LF E +
Sbjct: 12 LVKLHGLPWSCSVKDVQNFL-----SNCMIRDGVTCVHFIYSTEGRQSGELHQLFLELQS 66
Query: 498 EEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
++ AL K + S+G YIE+F+S E++ VL
Sbjct: 67 DDVKMALKKDRVSMGHWYIEVFKSHRTEMELVL 99
Score = 110 (43.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY+ T + +F N V E G PDG+ T +A V F EEA
Sbjct: 293 VHMRGLPYKATENDIYNF---SLLNPVRVHI-EIG------PDGRVTSEADVEFATHEEA 342
Query: 501 DKALSKHKESIGIRYIELFRSTT 523
A+SK++ ++ RYIELF ++T
Sbjct: 343 MVAMSKNRANMQHRYIELFLNST 365
Score = 86 (35.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 54 IQGFKKVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRH 113
++G E I++F I+ + + + +G+ +GEAF+Q S+ A A L
Sbjct: 117 LRGLPFGCTEDIIQFFSGL--EIMPNRITLPVDPEGKTTGEAFVQFASQELAEKA--LGK 172
Query: 114 NRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPP 146
N+ I G RYIEVF S E + L+ PP
Sbjct: 173 NKKRIIG--HRYIEVFNSSQEGVRSYLD---PP 200
Score = 50 (22.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YLPQHIITSGTRKDCIRLRGLPYEA 590
Y T C+ +RGLPY+A
Sbjct: 278 YRDGEFTVQSTTGHCVHMRGLPYKA 302
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 581 IRLRGLPY 588
+RLRGLP+
Sbjct: 115 VRLRGLPF 122
>UNIPROTKB|J9NZV3 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AAEX03013911 Ensembl:ENSCAFT00000048972 Uniprot:J9NZV3
Length = 888
Score = 132 (51.5 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F E +
Sbjct: 432 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNEADY 484
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 485 KAALCRHKQYMGNRFIQV 502
Score = 128 (50.1 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 52/170 (30%), Positives = 76/170 (44%)
Query: 261 IPTNLPALPAVPTSG----GYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVL-P 315
+P+ P P P SG P LP MN + PMN N PV L P
Sbjct: 229 VPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGA--PMN----LNNNLNPVFLGPLNP 282
Query: 316 KFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAF 375
P+ Q+N +V P P NP L V + S + N + + L + V L
Sbjct: 283 VNPI-QMNSQSSVK--PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHV 339
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 340 GRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 94 (38.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 38/167 (22%), Positives = 74/167 (44%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA-----GGNNN 427
G+ GE V F ++ AL RHK ++ R+I+V TK + I++ + +
Sbjct: 468 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 527
Query: 428 EAQAFLT-RG----AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ + L G A+V + +P+ T V+ F E + E V +
Sbjct: 528 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 580
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 581 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 627
Score = 77 (32.2 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
+F + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 DFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 376
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + V G +I P G+T P LP S P
Sbjct: 377 AT--ERQWVAAGGHITFKQSIGPSGQTHPPPQTLPRSKSP 414
Score = 75 (31.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+I+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 806 VIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 858
Query: 500 ADKA-LSKHKESIGIR 514
A A + + IG R
Sbjct: 859 ATAAVIDLNDRPIGSR 874
Score = 69 (29.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 35/128 (27%), Positives = 48/128 (37%)
Query: 225 LNKPHNMA-LNGHTPTLIXXXXXXXXXXXXXXXKST----TIPTNLPALPAVPTSGGYFP 279
+N P + N +P+++ ST T P N+ A PT P
Sbjct: 117 VNLPTTVPNFNNPSPSVVTAATSVHESNKNIQTFSTASIGTAPPNMGASFGSPTFSSTIP 176
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
P MNT + P P MP +P P + P PV P V T+P P PV
Sbjct: 177 STASP--MNT---VPPPPIPPIPAMPSLPPMPSI-PPIPV-----PPPVPTLP-PVPPVP 224
Query: 340 LCPLVQNI 347
P V ++
Sbjct: 225 PIPPVPSV 232
Score = 52 (23.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 228 PHNMALNGHTPTLIXXXXXXXXXXXXXXXKSTTIPTNLPALPAVPTSGGYFPQFQLPINM 287
P NM + +PT IP +PA+P++P P +P +
Sbjct: 159 PPNMGASFGSPTF--SSTIPSTASPMNTVPPPPIPP-IPAMPSLPPMPS-IPPIPVPPPV 214
Query: 288 NTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVAL 340
T L P+ P +P +P P V P P+ ++ P + P P +
Sbjct: 215 PT---LPPV-PP----VPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAPLPAGM 259
Score = 39 (18.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 144 LPPTSPAISPVGKTLLSP--GMLPHSSQPLYP 173
+PP P++ P+ T L P GM P + P+ P
Sbjct: 226 IPPV-PSVPPM--TPLPPMSGMPPLNPPPVAP 254
>UNIPROTKB|F1P982 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:AAEX03013911 Ensembl:ENSCAFT00000013161
Uniprot:F1P982
Length = 945
Score = 132 (51.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F E +
Sbjct: 454 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNEADY 506
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 507 KAALCRHKQYMGNRFIQV 524
Score = 128 (50.1 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 52/170 (30%), Positives = 76/170 (44%)
Query: 261 IPTNLPALPAVPTSG----GYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVL-P 315
+P+ P P P SG P LP MN + PMN N PV L P
Sbjct: 251 VPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGA--PMN----LNNNLNPVFLGPLNP 304
Query: 316 KFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAF 375
P+ Q+N +V P P NP L V + S + N + + L + V L
Sbjct: 305 VNPI-QMNSQSSVK--PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHV 361
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 362 GRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 410
Score = 94 (38.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 38/167 (22%), Positives = 74/167 (44%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA-----GGNNN 427
G+ GE V F ++ AL RHK ++ R+I+V TK + I++ + +
Sbjct: 490 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 549
Query: 428 EAQAFLT-RG----AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ + L G A+V + +P+ T V+ F E + E V +
Sbjct: 550 QREMMLNPEGDVSSAKVCAHITNIPFSITKMDVLQFLEG-------IPVDENAVHVLVDN 602
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 603 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 649
Score = 81 (33.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+I+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 870 VIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 922
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 923 ATAAVIDLNDRPIGSRKVKL 942
Score = 77 (32.2 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
+F + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 344 DFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 398
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + V G +I P G+T P LP S P
Sbjct: 399 AT--ERQWVAAGGHITFKQSIGPSGQTHPPPQTLPRSKSP 436
Score = 69 (29.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 35/128 (27%), Positives = 48/128 (37%)
Query: 225 LNKPHNMA-LNGHTPTLIXXXXXXXXXXXXXXXKST----TIPTNLPALPAVPTSGGYFP 279
+N P + N +P+++ ST T P N+ A PT P
Sbjct: 139 VNLPTTVPNFNNPSPSVVTAATSVHESNKNIQTFSTASIGTAPPNMGASFGSPTFSSTIP 198
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
P MNT + P P MP +P P + P PV P V T+P P PV
Sbjct: 199 STASP--MNT---VPPPPIPPIPAMPSLPPMPSI-PPIPV-----PPPVPTLP-PVPPVP 246
Query: 340 LCPLVQNI 347
P V ++
Sbjct: 247 PIPPVPSV 254
Score = 52 (23.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 228 PHNMALNGHTPTLIXXXXXXXXXXXXXXXKSTTIPTNLPALPAVPTSGGYFPQFQLPINM 287
P NM + +PT IP +PA+P++P P +P +
Sbjct: 181 PPNMGASFGSPTF--SSTIPSTASPMNTVPPPPIPP-IPAMPSLPPMPS-IPPIPVPPPV 236
Query: 288 NTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVAL 340
T L P+ P +P +P P V P P+ ++ P + P P +
Sbjct: 237 PT---LPPV-PP----VPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAPLPAGM 281
Score = 39 (18.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 144 LPPTSPAISPVGKTLLSP--GMLPHSSQPLYP 173
+PP P++ P+ T L P GM P + P+ P
Sbjct: 248 IPPV-PSVPPM--TPLPPMSGMPPLNPPPVAP 276
>UNIPROTKB|I3LFQ0 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087736 EMBL:FP476068
Ensembl:ENSSSCT00000027886 OMA:NDIANXH Uniprot:I3LFQ0
Length = 216
Score = 181 (68.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
>UNIPROTKB|I3LLW0 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:CU210870 EMBL:CU914282 Ensembl:ENSSSCT00000023753
Ensembl:ENSSSCT00000028045 Uniprot:I3LLW0
Length = 955
Score = 132 (51.5 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F E +
Sbjct: 454 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNEADY 506
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 507 KAALCRHKQYMGNRFIQV 524
Score = 127 (49.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 53/170 (31%), Positives = 76/170 (44%)
Query: 261 IPTNLPALPAVPTSG----GYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVL-P 315
+P+ P P P SG P LP MN + PMN N PV L P
Sbjct: 251 VPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGA--PMN----LNNNLNPVFLGPLNP 304
Query: 316 KFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAF 375
PV Q+N +V P P NP L V + S + N + + L + V L
Sbjct: 305 VNPV-QMNSQSSVK--PLPINPDDLYVSVHGMPFSAVENDVREFFHGLRVDAVHLLKDHV 361
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GR NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 362 GRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 410
Score = 95 (38.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVA-----GGNNN 427
G+ GE V F ++ AL RHK ++ R+I+V TK + I++ + +
Sbjct: 490 GKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD 549
Query: 428 EAQAFLT-----RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
+ + L A+V + +P+ T V+ F E + E V +
Sbjct: 550 QREMMLNPEGDVNSAKVCAHITNIPFSVTKMDVLQFLEG-------IPVDENAVHVLVDN 602
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A K+ H++ + R + T +++++
Sbjct: 603 NGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLEDMREI 649
Score = 81 (33.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+I+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 880 VIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 932
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 933 ATAAVIDLNDRPIGSRKVKL 952
Score = 80 (33.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 27/100 (27%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 344 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 398
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + V G +I P G+T P LP S P
Sbjct: 399 AT--ERQWVAAGGHITFKQSIGPSGQTHPPPQTLPRSKSP 436
Score = 69 (29.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 35/128 (27%), Positives = 48/128 (37%)
Query: 225 LNKPHNMA-LNGHTPTLIXXXXXXXXXXXXXXXKST----TIPTNLPALPAVPTSGGYFP 279
+N P + N +P+++ ST T P N+ A PT P
Sbjct: 139 VNLPTTVPNFNNPSPSVVTAATSVHESNKNIQTFSTASIGTAPPNMGASFGSPTFSSTIP 198
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
P MNT + P P MP +P P + P PV P V T+P P PV
Sbjct: 199 STASP--MNT---VPPPPIPPIPAMPSLPPMPSI-PPIPV-----PPPVPTLP-PVPPVP 246
Query: 340 LCPLVQNI 347
P V ++
Sbjct: 247 PIPPVPSV 254
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 228 PHNMALNGHTPTLIXXXXXXXXXXXXXXXKSTTIPTNLPALPAVPTSGGYFPQFQLPINM 287
P NM + +PT IP +PA+P++P P +P +
Sbjct: 181 PPNMGASFGSPTF--SSTIPSTASPMNTVPPPPIPP-IPAMPSLPPMPS-IPPIPVPPPV 236
Query: 288 NTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVAL 340
T L P+ P +P +P P V P P+ ++ P + P P +
Sbjct: 237 PT---LPPV-PP----VPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAPLPAGM 281
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 144 LPPTS--PAISPVGKTLLSPGMLPHSSQPLYPQHNTQINPGLSHLDPLVNVHLTQALAQA 201
LPP S P ++P L GM S P+ N +NP L PL V+ Q +Q+
Sbjct: 260 LPPMSGMPPLNPPPVAPLPAGM-NGSGAPM--NLNNNLNPVF--LGPLNPVNPVQMNSQS 314
Score = 39 (18.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 144 LPPTSPAISPVGKTLLSP--GMLPHSSQPLYP 173
+PP P++ P+ T L P GM P + P+ P
Sbjct: 248 IPPV-PSVPPM--TPLPPMSGMPPLNPPPVAP 276
>UNIPROTKB|F1MND5 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087828 CTD:10137 OMA:PVFLGPL
EMBL:DAAA02036525 IPI:IPI00924418 RefSeq:NP_001185821.1
UniGene:Bt.91136 Ensembl:ENSBTAT00000061188 GeneID:100138139
KEGG:bta:100138139 NextBio:20789665 Uniprot:F1MND5
Length = 953
Score = 132 (51.5 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F E +
Sbjct: 432 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNEADY 484
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 485 KAALCRHKQYMGNRFIQV 502
Score = 126 (49.4 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 51/167 (30%), Positives = 76/167 (45%)
Query: 265 LPALPAVPTSGGYFPQFQLP-INMN-TAHLLQPMN---TPFFFNMPRMPVTPQVL-PKFP 318
+P +P+VP P +P +N A L MN P N PV L P P
Sbjct: 226 IPPVPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGAPVNLNNNLNPVFLGPLNPVNP 285
Query: 319 VHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRR 378
V Q+N +V P P NP L V + S + N + + L + V L GR
Sbjct: 286 V-QMNSQSSVK--PLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRN 342
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 343 NGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 82 (33.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 878 IIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 930
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 931 ATAAVIDLNDRPIGSRKVKL 950
Score = 76 (31.8 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
+F + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 DFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 376
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ + V G +I P G+T P LP S P
Sbjct: 377 AT--ERQWVAAGGHITFKQSIGPSGQTHPPPQPLPRSKSP 414
Score = 68 (29.0 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 35/128 (27%), Positives = 48/128 (37%)
Query: 225 LNKPHNMA-LNGHTPTLIXXXXXXXXXXXXXXXKST----TIPTNLPALPAVPTSGGYFP 279
+N P + N +P+++ ST T P N+ A PT P
Sbjct: 117 VNLPTTVPNFNNPSPSVVTATTSVHESSKNIQTFSTASIGTAPPNMGASFGSPTFSSTVP 176
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
P MNT + P P MP +P P + P PV P V T+P P PV
Sbjct: 177 STASP--MNT---VPPPPIPPIPAMPSLPPMPSI-PPIPV-----PPPVPTMP-PVPPVP 224
Query: 340 LCPLVQNI 347
P V ++
Sbjct: 225 PIPPVPSV 232
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 258 STTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
+T P +P +PA+P+ P PI + P P +P +P P V P
Sbjct: 183 NTVPPPPIPPIPAMPSLPP-MPSIP-PIPVPPPVPTMPPVPP----VPPIPPVPSVPPMT 236
Query: 318 PVHQLNQTPTVYTIPTPGNPVAL 340
P+ ++ P + P P +
Sbjct: 237 PLPPMSGMPPLNPPPVAPLPAGM 259
Score = 39 (18.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 144 LPPTSPAISPVGKTLLSP--GMLPHSSQPLYP 173
+PP P++ P+ T L P GM P + P+ P
Sbjct: 226 IPPV-PSVPPM--TPLPPMSGMPPLNPPPVAP 254
>MGI|MGI:1922960 [details] [associations]
symbol:Rbm12 "RNA binding motif protein 12" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1922960 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AL833786 UniGene:Mm.27660
GeneTree:ENSGT00620000087828 HOVERGEN:HBG057691 CTD:10137
OMA:PVFLGPL EMBL:AF345334 EMBL:AF393215 EMBL:AF393216 EMBL:AK017591
EMBL:AK029180 EMBL:AK035014 EMBL:AK080772 EMBL:AK166833
EMBL:BC026891 EMBL:BC027810 EMBL:BC052473 IPI:IPI00322263
RefSeq:NP_083673.3 RefSeq:NP_733486.2 UniGene:Mm.441281 PDB:2CQP
PDBsum:2CQP ProteinModelPortal:Q8R4X3 SMR:Q8R4X3 IntAct:Q8R4X3
STRING:Q8R4X3 PhosphoSite:Q8R4X3 PRIDE:Q8R4X3
Ensembl:ENSMUST00000059647 Ensembl:ENSMUST00000109604 GeneID:75710
KEGG:mmu:75710 UCSC:uc008nmh.1 InParanoid:Q3TKT7 ChiTaRS:RBM12
EvolutionaryTrace:Q8R4X3 NextBio:343756 Bgee:Q8R4X3
CleanEx:MM_RBM12 Genevestigator:Q8R4X3
GermOnline:ENSMUSG00000038171 Uniprot:Q8R4X3
Length = 992
Score = 129 (50.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F + +
Sbjct: 432 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNDADY 484
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 485 KAALCRHKQYMGNRFIQV 502
Score = 124 (48.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 49/168 (29%), Positives = 78/168 (46%)
Query: 265 LPALPAVPTSGGYFPQFQLP-INMN-TAHLLQPMN---TPFFFNMPRMPVTPQVLPKFPV 319
+P +P+VP P +P +N A L MN P N PV + P PV
Sbjct: 226 IPPVPSVPPMTTLPPMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVF--LGPLNPV 283
Query: 320 H--QLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGR 377
+ Q+N +V ++P NP L V + S + N + + L + V L GR
Sbjct: 284 NSIQMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGR 341
Query: 378 RNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 342 NNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 82 (33.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 917 IIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 969
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 970 ATAAVIDLNDRPIGSRKVKL 989
Score = 72 (30.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 376
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ E + G + ++ P G+ P LP S P
Sbjct: 377 AT-ERQWVAAGGHIT-FKQSMGPSGQAHPPPQTLPRSKSP 414
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/91 (25%), Positives = 36/91 (39%)
Query: 258 STTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
S+TIP+ + VP P ++ + P+ P P +P P V P
Sbjct: 172 SSTIPSTASPMNTVPPPP--IPPIPAMPSLPPLPSIPPIPVP-----PPVPTLPPVPPVP 224
Query: 318 PVHQLNQTPTVYTIPT-----PGNPVALCPL 343
P+ + P + T+P P NP + PL
Sbjct: 225 PIPPVPSVPPMTTLPPMSGMPPLNPPPVAPL 255
Score = 41 (19.5 bits), Expect = 0.00086, Sum P(2) = 0.00085
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 144 LPPTSPAISPVGKTLLSP--GMLPHSSQPLYP 173
+PP P++ P+ T L P GM P + P+ P
Sbjct: 226 IPPV-PSVPPM--TTLPPMSGMPPLNPPPVAP 254
>UNIPROTKB|D4A116 [details] [associations]
symbol:Rbm12 "Protein Rbm12" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1594333 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC118414 IPI:IPI00560597 Ensembl:ENSRNOT00000026700
ArrayExpress:D4A116 Uniprot:D4A116
Length = 1003
Score = 129 (50.5 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F + +
Sbjct: 432 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNDADY 484
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 485 KAALCRHKQYMGNRFIQV 502
Score = 123 (48.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 49/167 (29%), Positives = 77/167 (46%)
Query: 265 LPALPAVPTSGGYFPQFQLP-INMN-TAHLLQPMN---TPFFFNMPRMPVTPQVL-PKFP 318
+P +P+VP P +P +N A L MN P N PV L P P
Sbjct: 226 IPPVPSVPPMTTLPPISGMPPLNPPPVAPLPTGMNGSGAPISLNNNLNPVFLGPLNPVNP 285
Query: 319 VHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRR 378
+ Q+N +V ++P NP L V + S + N + + L + V L GR
Sbjct: 286 I-QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRN 342
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 343 NGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 82 (33.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 928 IIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 980
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 981 ATAAVIDLNDRPIGSRKVKL 1000
Score = 72 (30.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 376
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ E + G + ++ P G+ P LP S P
Sbjct: 377 AT-ERQWVAAGGHIT-FKQSMGPSGQAHPPPQTLPRSKSP 414
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/91 (25%), Positives = 36/91 (39%)
Query: 258 STTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
S+TIP+ + VP P ++ + P+ P P +P P V P
Sbjct: 172 SSTIPSTASPMNTVPPPP--IPPIPSMPSLPPLPSIPPIPVP-----PPVPTLPPVPPVP 224
Query: 318 PVHQLNQTPTVYTIPT-----PGNPVALCPL 343
P+ + P + T+P P NP + PL
Sbjct: 225 PIPPVPSVPPMTTLPPISGMPPLNPPPVAPL 255
>RGD|1594333 [details] [associations]
symbol:Rbm12 "RNA binding motif protein 12" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1594333 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CH474050 eggNOG:NOG299235
GeneTree:ENSGT00620000087828 HOVERGEN:HBG057691 CTD:10137
OMA:PVFLGPL EMBL:AC118414 EMBL:AY226099 IPI:IPI00421433
RefSeq:NP_001032746.1 UniGene:Rn.7119 SMR:Q6XLI7
Ensembl:ENSRNOT00000047246 GeneID:652928 KEGG:rno:652928
UCSC:RGD:1594333 HOGENOM:HOG000143525 InParanoid:Q6XLI7
NextBio:714873 Genevestigator:Q6XLI7 Uniprot:Q6XLI7
Length = 1032
Score = 129 (50.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKATG+ FV F + +
Sbjct: 432 VYLKGLPFEAENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKATGEGFVEFRNDADY 484
Query: 501 DKALSKHKESIGIRYIEL 518
AL +HK+ +G R+I++
Sbjct: 485 KAALCRHKQYMGNRFIQV 502
Score = 123 (48.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 49/167 (29%), Positives = 77/167 (46%)
Query: 265 LPALPAVPTSGGYFPQFQLP-INMN-TAHLLQPMN---TPFFFNMPRMPVTPQVL-PKFP 318
+P +P+VP P +P +N A L MN P N PV L P P
Sbjct: 226 IPPVPSVPPMTTLPPISGMPPLNPPPVAPLPTGMNGSGAPISLNNNLNPVFLGPLNPVNP 285
Query: 319 VHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLSAFGRR 378
+ Q+N +V ++P NP L V + S + N + + L + V L GR
Sbjct: 286 I-QMNSQSSVKSLPI--NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRN 342
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
NG +V+F+ + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 343 NGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 82 (33.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
II+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 957 IIKVQNMPFTVSIDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 1009
Query: 500 ADKA-LSKHKESIGIRYIEL 518
A A + + IG R ++L
Sbjct: 1010 ATAAVIDLNDRPIGSRKVKL 1029
Score = 72 (30.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF + VH++ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA--LKRNRMLMI---QRYVEVSP 376
Query: 131 CSGEDMNLVLNGVLPPTSPAISPVGKTLLSPGMLPHSSQP 170
+ E + G + ++ P G+ P LP S P
Sbjct: 377 AT-ERQWVAAGGHIT-FKQSMGPSGQAHPPPQTLPRSKSP 414
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 23/91 (25%), Positives = 36/91 (39%)
Query: 258 STTIPTNLPALPAVPTSGGYFPQFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKF 317
S+TIP+ + VP P ++ + P+ P P +P P V P
Sbjct: 172 SSTIPSTASPMNTVPPPP--IPPIPSMPSLPPLPSIPPIPVP-----PPVPTLPPVPPVP 224
Query: 318 PVHQLNQTPTVYTIPT-----PGNPVALCPL 343
P+ + P + T+P P NP + PL
Sbjct: 225 PIPPVPSVPPMTTLPPISGMPPLNPPPVAPL 255
>UNIPROTKB|H0YB39 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
PRIDE:H0YB39 Ensembl:ENST00000521173 Bgee:H0YB39 Uniprot:H0YB39
Length = 277
Score = 140 (54.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
G++TG+AFV F +E A+KAL KHKE IG RYIE+F+S+ AEV+
Sbjct: 24 GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVR 67
Score = 126 (49.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 166 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 216
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 217 VAAMSKDKANMQHRYVELFLNSTA 240
Score = 103 (41.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 373 SAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
S+ GR GEA V+F QE + ALK+HK I RYIE+ K++
Sbjct: 21 SSQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 62
Score = 72 (30.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 86 NSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCS 132
+SQG+ +GEAF+Q S+ A A + +H + G RYIE+F+ S
Sbjct: 21 SSQGRSTGEAFVQFASQEIAEKALK-KHKERI--G--HRYIEIFKSS 62
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 576 TRKDCIRLRGLPYEA 590
T C+ +RGLPY A
Sbjct: 161 TTGHCVHMRGLPYRA 175
>UNIPROTKB|F1NWS6 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 EMBL:AADN02009154 IPI:IPI00602123
Ensembl:ENSGALT00000018869 OMA:ISTKREM Uniprot:F1NWS6
Length = 411
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/173 (30%), Positives = 93/173 (53%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ L+ GRR G+A++ + AL+++ ++ RY++V + + +D +
Sbjct: 103 GENGIHFLLNRDGRRRGDALIELESKADVQKALEKNLRYMGTRYVKVHEIHDKDVDGLLQ 162
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPD 483
E++ ++ G ++ +RGLP++ T + DFF AG + D + FV + +
Sbjct: 163 SLRYESEV-MSDG---VVLLRGLPFDSTEDDIADFF-AGLR----ITD----MTFVYRGE 209
Query: 484 GKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
K TG+A+V F E KAL +HKE + RYIE++ ST E+Q+ L+ E+
Sbjct: 210 RK-TGEAYVQFAAPEMVAKALLRHKEYMENRYIEVYISTKREMQRHLSLRKEM 261
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+IR G P+ CT K+++ FF+ SC + +GE G+ F+ DG+ GDA + E + +
Sbjct: 76 LIRAHGFPFACTKKEMMAFFD-----SCKIRNGENGIHFLLNRDGRRRGDALIELESKAD 130
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
KAL K+ +G RY+++ +V +L
Sbjct: 131 VQKALEKNLRYMGTRYVKVHEIHDKDVDGLL 161
>UNIPROTKB|D6RDL0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HOGENOM:HOG000220896 HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00964237
ProteinModelPortal:D6RDL0 SMR:D6RDL0 Ensembl:ENST00000515714
ArrayExpress:D6RDL0 Bgee:D6RDL0 Uniprot:D6RDL0
Length = 84
Score = 164 (62.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 31/85 (36%), Positives = 54/85 (63%)
Query: 434 TRGAQ-VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
T G + ++++RGLP+ C+A +V FF + C + +G +G+ F+ +G+ +G+AFV
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFF-----SDCKIQNGAQGIRFIYTREGRPSGEAFV 59
Query: 493 LFEKEEEADKALSKHKESIGIRYIE 517
E E+E AL K +E++G RY+E
Sbjct: 60 ELESEDEVKLALKKDRETMGHRYVE 84
>UNIPROTKB|E1BB17 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087736 OMA:PYDRPLG
EMBL:DAAA02061815 IPI:IPI00696173 ProteinModelPortal:E1BB17
SMR:E1BB17 PRIDE:E1BB17 Ensembl:ENSBTAT00000019039 Uniprot:E1BB17
Length = 346
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + + F G + MRGLP+ T + +FF ++ G
Sbjct: 182 GGAGDASSGF--HGGH-FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA--------- 229
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 230 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 270
Score = 95 (38.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A +H + G
Sbjct: 30 EEIVQFFQGL--EIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALG-KHKERI--G-- 82
Query: 123 QRYIEVFQCSGEDM 136
RYIE+F+ S ++
Sbjct: 83 HRYIEIFRSSRSEI 96
>UNIPROTKB|F1P8D3 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OMA:PYDRPLG
EMBL:AAEX03002774 RefSeq:XP_536369.2 ProteinModelPortal:F1P8D3
Ensembl:ENSCAFT00000000525 GeneID:479227 KEGG:cfa:479227
Uniprot:F1P8D3
Length = 346
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + + F G + MRGLP+ T + +FF ++ G
Sbjct: 182 GGAGDASSGF--HGGH-FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA--------- 229
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 230 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 270
Score = 95 (38.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A +H + G
Sbjct: 30 EEIVQFFQGL--EIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALG-KHKERI--G-- 82
Query: 123 QRYIEVFQCSGEDM 136
RYIE+F+ S ++
Sbjct: 83 HRYIEIFRSSRSEI 96
>UNIPROTKB|P31942 [details] [associations]
symbol:HNRNPH3 "Heterogeneous nuclear ribonucleoprotein H3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=NAS]
[GO:0003723 "RNA binding" evidence=NAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 EMBL:CH471083
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 GO:GO:0000398
eggNOG:NOG262593 HOVERGEN:HBG055557 KO:K12898 EMBL:L32610
EMBL:AF132360 EMBL:AF132361 EMBL:AF132362 EMBL:AF132363
EMBL:AF132364 EMBL:AK091411 EMBL:AK291547 EMBL:AL117395
EMBL:BC004511 EMBL:BC039824 IPI:IPI00013877 IPI:IPI00216492
IPI:IPI00216493 IPI:IPI00216494 IPI:IPI00216495 IPI:IPI00216496
PIR:T17207 RefSeq:NP_036339.1 RefSeq:NP_067676.2 UniGene:Hs.643472
ProteinModelPortal:P31942 SMR:P31942 IntAct:P31942
MINT:MINT-5004191 STRING:P31942 PhosphoSite:P31942 DMDM:23503095
PaxDb:P31942 PRIDE:P31942 Ensembl:ENST00000265866
Ensembl:ENST00000354695 GeneID:3189 KEGG:hsa:3189 UCSC:uc001jnw.4
UCSC:uc001jnx.4 CTD:3189 GeneCards:GC10P070090 HGNC:HGNC:5043
HPA:HPA038264 MIM:602324 neXtProt:NX_P31942 PharmGKB:PA162391325
InParanoid:P31942 OMA:PYDRPLG OrthoDB:EOG49P9ZV PhylomeDB:P31942
ChiTaRS:HNRNPH3 GenomeRNAi:3189 NextBio:12680 ArrayExpress:P31942
Bgee:P31942 CleanEx:HS_HNRNPH3 Genevestigator:P31942
GermOnline:ENSG00000096746 Uniprot:P31942
Length = 346
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + + F G + MRGLP+ T + +FF ++ G
Sbjct: 182 GGAGDASSGF--HGGH-FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA--------- 229
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 230 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 270
Score = 95 (38.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A +H + G
Sbjct: 30 EEIVQFFQGL--EIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALG-KHKERI--G-- 82
Query: 123 QRYIEVFQCSGEDM 136
RYIE+F+ S ++
Sbjct: 83 HRYIEIFRSSRSEI 96
>RGD|1310019 [details] [associations]
symbol:Hnrnph3 "heterogeneous nuclear ribonucleoprotein H3
(2H9)" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:1310019 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 EMBL:CH473988
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OrthoDB:EOG49P9ZV
IPI:IPI00372854 RefSeq:NP_001102002.1 UniGene:Rn.60652 SMR:D4ABK7
Ensembl:ENSRNOT00000032600 GeneID:361838 KEGG:rno:361838
UCSC:RGD:1310019 NextBio:677788 Uniprot:D4ABK7
Length = 346
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E A
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTMDYQGRSTGEAFVQFASKEIA 70
Query: 501 DKALSKHKESIGIRYIELFRSTTAEVQ 527
+ AL KHKE IG RYIE+FRS+ +E++
Sbjct: 71 ENALGKHKERIGHRYIEIFRSSRSEIK 97
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + + F G + MRGLP+ T + +FF ++ G
Sbjct: 182 GGAGDASSGF--HGGH-FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA--------- 229
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 230 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 270
Score = 95 (38.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L + GR GEA V+F +E + AL +HK I RYIE+ +++
Sbjct: 45 GITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A +H + G
Sbjct: 30 EEIVQFFQGL--EIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALG-KHKERI--G-- 82
Query: 123 QRYIEVFQCSGEDM 136
RYIE+F+ S ++
Sbjct: 83 HRYIEIFRSSRSEI 96
>UNIPROTKB|F1NNR6 [details] [associations]
symbol:LOC100858337 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:AADN02019509 EMBL:AADN02019510 IPI:IPI00571732
Ensembl:ENSGALT00000002400 Uniprot:F1NNR6
Length = 868
Score = 125 (49.1 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ ++GLP+E K VIDFF+ +++ E+ + P+GKA G+ FV F E +
Sbjct: 433 VYLKGLPFESENKHVIDFFK-----KLDIV--EDSIYIAYGPNGKAIGEGFVEFRNEADY 485
Query: 501 DKALSKHKESIGIRYIEL 518
AL HK+ IG R+I++
Sbjct: 486 KAALCHHKQYIGNRFIQV 503
Score = 114 (45.2 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 47/172 (27%), Positives = 72/172 (41%)
Query: 261 IPTNLPALPAVPTSG----GYFPQFQLPINMNTAHLLQPMNT---PFFFNMPRMPVTPQV 313
+P P P P SG P LP MN + MN+ P F P PV P
Sbjct: 229 VPPVPPMTPIPPISGMPPLNPPPVAPLPTGMNGSGAAVNMNSGLNPLFIG-PMNPVNPI- 286
Query: 314 LPKFPVHQLNQTPTVYTIPTPGNPVALCPLVQNIWLSLLLNTIPGYEQVLGLGGVALCLS 373
Q+N +V IP NP L + + S + + + L + + +
Sbjct: 287 -------QMNSQSSVKPIPI--NPDDLYVSIHGMPFSATESDVKEFFLGLRVDAIHMLKD 337
Query: 374 AFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGN 425
GR NG +V+F + ALKR++ + +RY+EV+ A ++ AGG+
Sbjct: 338 HVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGH 388
Score = 109 (43.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 45/169 (26%), Positives = 73/169 (43%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV----TKANGE--DFINVAGGNNNEA 429
G+ GE V F ++ AL HK +I R+I+V KA E D I N N
Sbjct: 469 GKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDLIRKRLQNFNYD 528
Query: 430 QAFLTRGAQ-------VIIRMRGLPYECTAKQVIDFFE--AGTENSCNVMDGEEGVLFVK 480
Q + A+ + + +PY T +++ F E A ENS ++
Sbjct: 529 QREIIMNAEAESGSPKLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDN------- 581
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQV 529
+G+ G A V F+ E++A KA H++ + R + L T E++ +
Sbjct: 582 --NGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVVLRLITVEEMRDI 628
Score = 72 (30.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
+I+++ +P+ + +++DFF G + V+ G + + +K G TG+A V FE +E
Sbjct: 805 VIKVQNMPFTVSVDEILDFFY-GYQ----VIPGSVCLKYNEK--GMPTGEAMVAFESRDE 857
Query: 500 ADKAL 504
A A+
Sbjct: 858 AMAAV 862
Score = 66 (28.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 35/125 (28%), Positives = 46/125 (36%)
Query: 225 LNKPHNMA-LNGHTPTLIXXXXXXXXXXXXXXXKST----TIPTNLPALPAVPTSGGYFP 279
+N P + N +P+++ ST T P NL + PT P
Sbjct: 117 VNLPTTVPNFNNPSPSVVTASTTVHESNKNISTFSTASMGTAPPNLGSTFGSPTFSSTVP 176
Query: 280 QFQLPINMNTAHLLQPMNTPFFFNMPRMPVTPQVLPKFPVHQLNQTPTVYTIPTPGNPVA 339
P MNT + P P MP +P P + P PV P V T+P P PV
Sbjct: 177 STASP--MNT---VPPPPIPPIPAMPSLPPMPSI-PPIPV-----PPPVPTLP-PVPPVP 224
Query: 340 LCPLV 344
P V
Sbjct: 225 PIPPV 229
Score = 61 (26.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEV 128
EF + +HM+ + G+ +G ++ S + A L+ NR ++ QRY+EV
Sbjct: 322 EFFLGLRVDAIHMLKDHVGRNNGNGLVKFFSPQDTFEA--LKRNRMLMI---QRYVEV 374
>UNIPROTKB|Q5F3D2 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG262593
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OMA:PYDRPLG
OrthoDB:EOG49P9ZV EMBL:AADN02028014 EMBL:AJ851718 IPI:IPI00573787
RefSeq:NP_001012610.1 UniGene:Gga.22904 SMR:Q5F3D2
Ensembl:ENSGALT00000006294 GeneID:423686 KEGG:gga:423686
InParanoid:Q5F3D2 NextBio:20826120 Uniprot:Q5F3D2
Length = 342
Score = 180 (68.4 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++R+RGLP+ C+ ++++ FF+ G E N G+ G++TG+AFV F +E
Sbjct: 19 VVRLRGLPFGCSKEEIVQFFQ-GLEIVPN------GITLTLDYQGRSTGEAFVQFASKEI 71
Query: 500 ADKALSKHKESIGIRYIELFRSTTAEVQ 527
A+ AL KHKE IG RYIE+F+S+ +E++
Sbjct: 72 AENALGKHKERIGHRYIEIFKSSKSEIR 99
Score = 117 (46.2 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 436 GAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFE 495
G + MRGLP+ T + +FF ++ G DG+ATG+A V F
Sbjct: 195 GGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA---------DGRATGEADVEFV 245
Query: 496 KEEEADKALSKHKESIGIRYIELFRSTTA 524
E+A A+SK K + RYIELF ++TA
Sbjct: 246 THEDAVAAMSKDKNHMQHRYIELFLNSTA 274
Score = 100 (40.3 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKAN 414
G+ L L GR GEA V+F +E + AL +HK I RYIE+ K++
Sbjct: 47 GITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSS 94
Score = 78 (32.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 63 EHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKK 122
E I++F IV G+ + + QG+ +GEAF+Q S+ A A +H + G
Sbjct: 32 EEIVQFFQGL--EIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALG-KHKERI--G-- 84
Query: 123 QRYIEVFQCSGEDM 136
RYIE+F+ S ++
Sbjct: 85 HRYIEIFKSSKSEI 98
>UNIPROTKB|E5RGH4 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00982782
ProteinModelPortal:E5RGH4 SMR:E5RGH4 Ensembl:ENST00000521790
ArrayExpress:E5RGH4 Bgee:E5RGH4 Uniprot:E5RGH4
Length = 100
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/109 (37%), Positives = 61/109 (55%)
Query: 406 RYIEVTKANGE--DFINVAGGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGT 463
RY+EV K+N D++ G N+ A G +R+RGLP+ C+ ++++ FF +G
Sbjct: 4 RYVEVFKSNNVEMDWVLKHTGPNSPDTA--NDG---FVRLRGLPFGCSKEEIVQFF-SGL 57
Query: 464 ENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIG 512
E N G+ G++TG+AFV F +E A+KAL KHKE IG
Sbjct: 58 EIVPN------GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 100
Score = 80 (33.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHI 403
G+ L + GR GEA V+F QE + ALK+HK I
Sbjct: 63 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERI 99
Score = 48 (22.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 124 RYIEVFQCSGEDMNLVLNGVLPPTSP 149
RY+EVF+ + +M+ VL P SP
Sbjct: 4 RYVEVFKSNNVEMDWVLKHT-GPNSP 28
>WB|WBGene00022253 [details] [associations]
symbol:hrpf-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0040018 GO:GO:0003676 EMBL:FO081731 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K12898 RefSeq:NP_741422.1
ProteinModelPortal:Q8MXR2 SMR:Q8MXR2 DIP:DIP-24945N IntAct:Q8MXR2
MINT:MINT-1106723 STRING:Q8MXR2 PaxDb:Q8MXR2
EnsemblMetazoa:Y73B6BL.33 GeneID:177398 KEGG:cel:CELE_Y73B6BL.33
UCSC:Y73B6BL.33 CTD:177398 WormBase:Y73B6BL.33 HOGENOM:HOG000017787
InParanoid:Q8MXR2 OMA:QRMGRRY NextBio:896644 Uniprot:Q8MXR2
Length = 610
Score = 174 (66.3 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 48/153 (31%), Positives = 74/153 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV--TKANGEDF-INVAGGNNNEAQAF 432
GR NGEA V F + E A++ + I RYIEV +A+ +F +N E
Sbjct: 99 GRPNGEAYVEFKNTEEAGKAMENDRKEISNRYIEVFTVEADEAEFEFRPDPDSNGEVNH- 157
Query: 433 LTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFV 492
+IR+RG+P+ C V FFE ++ G G P + +G+AFV
Sbjct: 158 -------VIRLRGVPWSCKEDDVRKFFEGLEPPPAEIVIGGTG-----GPRSRPSGEAFV 205
Query: 493 LFEKEEEADKALSKHKESIGIRYIELFRSTTAE 525
F ++ A+KA+ + +G RY+E+F S+ E
Sbjct: 206 RFTTQDAAEKAMDYNNRHMGSRYVEVFMSSMVE 238
Score = 101 (40.6 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 423 GGNNNEAQAFLTRGAQVIIR--MRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVK 480
GG++ ++ RG +R MRGLPY+ + FF +S + G+
Sbjct: 307 GGHDQGGRSDYGRGGDDPLRVYMRGLPYDADDHAIAAFFSPLRCHSVKI-----GI---- 357
Query: 481 KPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELF--RSTTAEVQQVLNK 532
G+ +GDA F+ + ALS++ + +G RY+ELF R ++++L K
Sbjct: 358 NETGRPSGDAIAEFDNYNDLQVALSRNNQRMGRRYVELFDNRGAPGPMRRLLWK 411
Score = 92 (37.4 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTR 435
R +GEA VRF Q+ + A+ + H+ RY+EV ++ +F GG + E A R
Sbjct: 198 RPSGEAFVRFTTQDAAEKAMDYNNRHMGSRYVEVFMSSMVEFNRAKGGGSGEYSASYER 256
Score = 73 (30.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 88 QGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNG 142
+ +PSGEAF++ ++ +A A +NR+M G RY+EVF S + N G
Sbjct: 196 RSRPSGEAFVRFTTQDAAEKAMDY-NNRHM--GS--RYVEVFMSSMVEFNRAKGG 245
Score = 68 (29.0 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 71 EFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQ 130
EF + + + V V + G+P+GEA+++ + A A + ++R I RYIEVF
Sbjct: 82 EFFAGLTIERVKFVCTT-GRPNGEAYVEFKNTEEAGKA--MENDRKEI---SNRYIEVFT 135
Query: 131 CSGED 135
++
Sbjct: 136 VEADE 140
Score = 38 (18.4 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 581 IRLRGLPYEA 590
+ +RGLPY+A
Sbjct: 327 VYMRGLPYDA 336
>WB|WBGene00020936 [details] [associations]
symbol:hrpf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:FO081084 GeneID:172395 KEGG:cel:CELE_W02D3.11 CTD:172395
RefSeq:NP_740877.1 ProteinModelPortal:Q9BIB7 SMR:Q9BIB7
DIP:DIP-24897N IntAct:Q9BIB7 MINT:MINT-1090704 STRING:Q9BIB7
PRIDE:Q9BIB7 EnsemblMetazoa:W02D3.11a.1 EnsemblMetazoa:W02D3.11a.2
UCSC:W02D3.11b WormBase:W02D3.11a HOGENOM:HOG000017293
InParanoid:Q9BIB7 OMA:EPYAQRE NextBio:875329 ArrayExpress:Q9BIB7
Uniprot:Q9BIB7
Length = 549
Score = 166 (63.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINV-AG--GNNNEAQAF 432
GR +G+A V F ++E + ALK+ + H+ RYIEV A G G G+ + +
Sbjct: 40 GRTSGDAKVVFTNEEDYNNALKKDREHLGSRYIEVFPAGGAPTRRGDRGERGDRGDRDHY 99
Query: 433 LTRGA-----------------QVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEG 475
+RGA I+R+RGLP+ T++ + DF ++ +G
Sbjct: 100 RSRGAPPRDRYSDRGGPRSSGPDSIVRLRGLPFSVTSRDISDFLAP-----LPIV--RDG 152
Query: 476 VLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT-M 534
+L + + G+A+V FE E A +H ++IG RYIE+F +T ++ + + +
Sbjct: 153 ILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVFEATHRDLSRFAEENDL 212
Query: 535 ELPK 538
+P+
Sbjct: 213 RVPR 216
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
++ RGLP+E T +++ DFF G +G E L + + +G+ +GDA V+F EE+
Sbjct: 7 VQCRGLPWEATEQELRDFF--GN-------NGIES-LEIPRRNGRTSGDAKVVFTNEEDY 56
Query: 501 DKALSKHKESIGIRYIELF 519
+ AL K +E +G RYIE+F
Sbjct: 57 NNALKKDREHLGSRYIEVF 75
Score = 109 (43.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 440 IIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEE 499
++RMRG+P+ + V DFF N ++ + ++P +GDA V+F ++
Sbjct: 472 VLRMRGVPFRASEADVYDFFHPIRPNQVELLRDHQ----FQRP----SGDARVIFYNRKD 523
Query: 500 ADKALSKHKESIGIRYIEL 518
D AL K K+ +G RYIE+
Sbjct: 524 YDDALMKDKQYMGERYIEM 542
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 65 ILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQR 124
I +FL IV G+ + + +P GEA++ ++ S +A Q RH +N+ G R
Sbjct: 139 ISDFLAPLP--IVRDGILLPDQQRARPGGEAYVCFETMESVQIAKQ-RHMKNI--G--HR 191
Query: 125 YIEVFQCSGEDMNLVL--NGVLPPT--SPAISPVGKTLLSPGMLPHSSQPLYPQHN 176
YIEVF+ + D++ N + P P + +T P+S QP P N
Sbjct: 192 YIEVFEATHRDLSRFAEENDLRVPRFGPPPFASAPQTAPRGAYDPYS-QPTDPYRN 246
Score = 77 (32.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 367 GVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNN 426
G+ L R GEA V F E +A +RH +I RYIEV +A D A N+
Sbjct: 152 GILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVFEATHRDLSRFAEEND 211
Query: 427 NEAQAF 432
F
Sbjct: 212 LRVPRF 217
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 89 GQPSGEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSG 133
G+ SG+A + +E Y A L+ +R + G RYIEVF G
Sbjct: 40 GRTSGDAKVVFTNEED-YNNA-LKKDREHL-GS--RYIEVFPAGG 79
>UNIPROTKB|H0YAM1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC021989
HGNC:HGNC:4610 ChiTaRS:GRSF1 PRIDE:H0YAM1 Ensembl:ENST00000506453
Bgee:H0YAM1 Uniprot:H0YAM1
Length = 114
Score = 138 (53.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 377 RRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAGGNNNEAQAFLTRG 436
+R G+A++ ++ AL++H+ ++ +RY+EV + N ED + ++ + G
Sbjct: 1 KRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDG 60
Query: 437 AQVIIRMRGLPYECTAKQVIDFF 459
++R+RGLPY C K ++DFF
Sbjct: 61 ---VVRLRGLPYSCNEKDIVDFF 80
Score = 92 (37.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 485 KATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMEL 536
K GDA + E E++ KAL KH+ +G RY+E++ +V ++ K++++
Sbjct: 1 KRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALM-KSLQV 51
Score = 86 (35.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 93 GEAFIQMDSEHSAYLAAQLRHNRNMIFGKKQRYIEVFQCSGEDMNLVLNGVLPPTSPAIS 152
G+A I+M+SE A + +H M G QRY+EV++ + ED++ ++ + +SP ++
Sbjct: 4 GDALIEMESEQDVQKALE-KHR--MYMG--QRYVEVYEINNEDVDALMKSLQVKSSPVVN 58
Score = 43 (20.2 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 581 IRLRGLPYEALCILMDI--FF 599
+RLRGLPY C DI FF
Sbjct: 62 VRLRGLPYS--CNEKDIVDFF 80
>UNIPROTKB|I3L5T6 [details] [associations]
symbol:I3L5T6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:CU633293
Ensembl:ENSSSCT00000028833 Uniprot:I3L5T6
Length = 413
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 364 GLGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG 423
G G+ + G +N + V ++ MALK+ + + +Y EV K++ + +
Sbjct: 39 GAAGIHFICTREGGQN-DIFVELGSEDDVKMALKKERGSMGHQYTEVFKSHRTEMDWMLK 97
Query: 424 GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP- 482
+ ++ G + ++GL + CT +++I FF +G E +M +++ P
Sbjct: 98 HSCPKSADNANDG---FVWLQGLLFGCTKEKIIQFF-SGLE----IMP-----IWITLPM 144
Query: 483 --DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQ 527
+GK TG+AFV F +E A+KAL KE IG RYIE+F+S+ EV+
Sbjct: 145 DLEGKITGEAFVQFTSQELAEKALGDRKERIGHRYIEVFKSSWEEVR 191
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 435 RGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLF 494
RG ++++ G+P+ C+ + V +F + C + G G+ F+ +G D FV
Sbjct: 7 RGEGFVVKLCGVPWSCSFEDVQNFL-----SHCTIRGGAAGIHFICTREG-GQNDIFVEL 60
Query: 495 EKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVL 530
E++ AL K + S+G +Y E+F+S E+ +L
Sbjct: 61 GSEDDVKMALKKERGSMGHQYTEVFKSHRTEMDWML 96
>ZFIN|ZDB-GENE-081022-16 [details] [associations]
symbol:rbm12 "RNA binding motif protein 12"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-081022-16 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOVERGEN:HBG057691 CTD:10137 HOGENOM:HOG000143525
EMBL:BC162102 EMBL:BC162473 EMBL:AY226101 IPI:IPI00483025
RefSeq:NP_001003856.1 UniGene:Dr.133225 SMR:Q6XLI5 GeneID:445379
KEGG:dre:445379 NextBio:20832083 Uniprot:Q6XLI5
Length = 876
Score = 159 (61.0 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 75/303 (24%), Positives = 120/303 (39%)
Query: 261 IPTNLPALPAVPTSGGYFPQFQLPINMNTAHL--LQPMNTPFFFNMPRMPVTPQVLPKFP 318
+P + ALP VPT Q+P + HL L P N P PV + P
Sbjct: 209 VPPPVSALPPVPTVNPLTSVPQVPPIAHMPHLSALPPFNPGI--PPPVGPVPGGLAASGP 266
Query: 319 VHQLNQTPTVYTIPTPGNPVALCPLVQN---------IWL-----SLLLNTIPGYEQVLG 364
+ N P P NP+ L P +++ + L S+L + I + LG
Sbjct: 267 LSLGNSNPMFLNPLNPLNPLNLQPHMKSAITNPDDFYVHLHGLPFSVLEHEIRDFFHGLG 326
Query: 365 LGGVALCLSAFGRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGEDFINVAG- 423
+ + L GR +G A+V+F ALKR+ I +RYIEV+ A + G
Sbjct: 327 IESIRLLKDNLGRNSGRALVKFYSPHESFEALKRNAGMIGQRYIEVSPATERQWRESVGH 386
Query: 424 ---GNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDF--------FEAGTENSCNVMDG 472
G ++E R A G + +D+ +EA +
Sbjct: 387 SKAGGDSEHNRHRRRSANSPTPSSGERARSRSPHKLDYCVYLKGLPYEAENKQIFEFFKN 446
Query: 473 ----EEGVLFVKKPDGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQ 528
E+ + P+G+ATG+ FV F E + AL H + +G R+I++ T + +
Sbjct: 447 LDIVEDSIYIAYGPNGRATGEGFVEFRNEMDYKAALGCHMQYMGSRFIQVHPITKKNMYE 506
Query: 529 VLN 531
++
Sbjct: 507 KID 509
Score = 98 (39.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 376 GRRNGEAIVRFIDQEHRDMALKRHKHHIDKRYIEV---TKANGEDFINVAG----GNNNE 428
GR GE V F ++ AL H ++ R+I+V TK N + I+ G+ +
Sbjct: 462 GRATGEGFVEFRNEMDYKAALGCHMQYMGSRFIQVHPITKKNMYEKIDAIRKRMQGSQGD 521
Query: 429 AQAFLTRG--AQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKA 486
++ G A+ + +PY T K V F + G E EE + + +G
Sbjct: 522 QKSSSGGGKSAKSCAHITNIPYNVTKKDVRLFLD-GIELF------EESLKVLVDSNGNG 574
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIR 514
G A V F+ +E+A KA H++ + R
Sbjct: 575 LGQAIVQFKSDEDALKAERLHRQKLNGR 602
Score = 73 (30.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 54 IQGFKKVLVEHILEFLGEFASNIVYQGVHMVYNSQGQPSGEAFIQMDSEHSAYLAAQLRH 113
+ G ++EH + +F + + + ++ ++ G+ SG A ++ S H ++ A L+
Sbjct: 306 LHGLPFSVLEHEIR---DFFHGLGIESIRLLKDNLGRNSGRALVKFYSPHESFEA--LKR 360
Query: 114 NRNMIFGKKQRYIEV 128
N MI G QRYIEV
Sbjct: 361 NAGMI-G--QRYIEV 372
>UNIPROTKB|F5GZT4 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 IPI:IPI00983613
ProteinModelPortal:F5GZT4 SMR:F5GZT4 PRIDE:F5GZT4
Ensembl:ENST00000511300 UCSC:uc011dgn.2 ArrayExpress:F5GZT4
Bgee:F5GZT4 Uniprot:F5GZT4
Length = 159
Score = 126 (49.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 21 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 71
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 72 VAAMSKDKANMQHRYVELFLNSTA 95
>UNIPROTKB|H0YAQ2 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
Ensembl:ENST00000519958 Bgee:H0YAQ2 Uniprot:H0YAQ2
Length = 131
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 379 NGEAIVRFIDQEHRDMALKRHKHHIDKRYIEVTKANGE--DFINVAGGNNNEAQAFLTRG 436
+GEA V ++ +ALK+ + + RY+EV K+N D++ G N+ A G
Sbjct: 1 SGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTA--NDG 58
Query: 437 AQVIIRMRGLPYECTAKQVIDFF 459
+R+RGLP+ C+ ++++ FF
Sbjct: 59 ---FVRLRGLPFGCSKEEIVQFF 78
Score = 107 (42.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 487 TGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTTAEVQQVLNKT 533
+G+AFV E E+E AL K +E++G RY+E+F+S E+ VL T
Sbjct: 1 SGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT 47
Score = 38 (18.4 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 581 IRLRGLPYEALCILMDI--FFVG 601
+RLRGLP+ C +I FF G
Sbjct: 60 VRLRGLPFG--CSKEEIVQFFSG 80
>UNIPROTKB|H0YBG7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 PRIDE:H0YBG7
Ensembl:ENST00000519033 Bgee:H0YBG7 Uniprot:H0YBG7
Length = 185
Score = 126 (49.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 47 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 97
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 98 VAAMSKDKANMQHRYVELFLNSTA 121
>UNIPROTKB|H0YBD7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
PRIDE:H0YBD7 Ensembl:ENST00000523921 Bgee:H0YBD7 Uniprot:H0YBD7
Length = 195
Score = 126 (49.4 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + +FF ++ G PDG+ TG+A V F E+A
Sbjct: 105 VHMRGLPYRATENDIYNFFSPLNPVRVHIEIG---------PDGRVTGEADVEFATHEDA 155
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 156 VAAMSKDKANMQHRYVELFLNSTA 179
>RGD|1310858 [details] [associations]
symbol:Grsf1 "G-rich RNA sequence binding factor 1"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 CTD:2926 eggNOG:NOG319259
HOGENOM:HOG000220896 OrthoDB:EOG4XPQGW IPI:IPI00364208
EMBL:BC103654 RefSeq:NP_001094360.1 UniGene:Rn.66912 GeneID:305256
KEGG:rno:305256 UCSC:RGD:1310858 InParanoid:Q3SYP9 NextBio:654276
ArrayExpress:Q3SYP9 Genevestigator:Q3SYP9 Uniprot:Q3SYP9
Length = 142
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLP++ A+ +I+FF A + M+ GKATG+A V F+ E+A
Sbjct: 65 VHMRGLPFQANAQDIINFF-APLKPVRITMEYSSS--------GKATGEADVHFDTHEDA 115
Query: 501 DKALSKHKESIGIRYIELF 519
A+ K + + RYIELF
Sbjct: 116 VAAMLKDRSHVQHRYIELF 134
>UNIPROTKB|E5RHG1 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC010834
HGNC:HGNC:32310 IPI:IPI00982580 ProteinModelPortal:E5RHG1
SMR:E5RHG1 Ensembl:ENST00000520560 ArrayExpress:E5RHG1 Bgee:E5RHG1
Uniprot:E5RHG1
Length = 122
Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQVLNKTMELPK 538
+A +A+S+ I +ELF S+ AE+Q KT+E+ +
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQ----KTIEMKR 87
>UNIPROTKB|B4DHY1 [details] [associations]
symbol:HNRNPH3 "cDNA FLJ57726, highly similar to
Heterogeneous nuclear ribonucleoprotein H3" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
UniGene:Hs.643472 HGNC:HGNC:5043 ChiTaRS:HNRNPH3 EMBL:AC016395
EMBL:AK295316 IPI:IPI00908651 SMR:B4DHY1 STRING:B4DHY1
Ensembl:ENST00000441000 UCSC:uc010qiv.2 Uniprot:B4DHY1
Length = 238
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + + F G + MRGLP+ T + +FF ++ G
Sbjct: 74 GGAGDASSGF--HGGH-FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA--------- 121
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 122 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 162
>UNIPROTKB|G3MYE8 [details] [associations]
symbol:G3MYE8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
EMBL:DAAA02039421 Ensembl:ENSBTAT00000065600 OMA:EVPRRIM
Uniprot:G3MYE8
Length = 248
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 423 GGNNNEAQAFLTRGAQVIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKP 482
GG + + F G + MRGLP+ T + +FF ++ G
Sbjct: 84 GGAGDASSGF--HGGH-FVHMRGLPFRATENDIANFFSPLNPIRVHIDIGA--------- 131
Query: 483 DGKATGDAFVLFEKEEEADKALSKHKESIGIRYIELFRSTT 523
DG+ATG+A V F E+A A+SK K ++ RYIELF ++T
Sbjct: 132 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNST 172
>UNIPROTKB|E5RJW8 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC010834
HGNC:HGNC:32310 IPI:IPI00980861 ProteinModelPortal:E5RJW8
SMR:E5RJW8 Ensembl:ENST00000521947 ArrayExpress:E5RJW8 Bgee:E5RJW8
Uniprot:E5RJW8
Length = 82
Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 439 VIIRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEE 498
V+IR+ GLP+ + FF T + DG GV + G G+AF++F +E
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFTGLT-----IPDG--GVHII----GGEIGEAFIIFATDE 51
Query: 499 EADKALSKHKESIGIRYIELFRSTTAEVQQ 528
+A +A+S+ I +ELF S+ AE+Q+
Sbjct: 52 DARRAISRSGGFIKDSSVELFLSSKAEMQK 81
>UNIPROTKB|F1P8D4 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
EMBL:AAEX03018089 Ensembl:ENSCAFT00000000519 OMA:THEDAGA
Uniprot:F1P8D4
Length = 193
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 441 IRMRGLPYECTAKQVIDFFEAGTENSCNVMDGEEGVLFVKKPDGKATGDAFVLFEKEEEA 500
+ MRGLPY T + FF ++ G P G+ G+A V F E+A
Sbjct: 90 VHMRGLPYRATENDIYIFFSPLNPVRVHIEIG---------PGGRVAGEADVEFATHEDA 140
Query: 501 DKALSKHKESIGIRYIELFRSTTA 524
A+SK K ++ RY+ELF ++TA
Sbjct: 141 GAAMSKDKANMQHRYVELFLNSTA 164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 612 585 0.00082 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 611 (65 KB)
Total size of DFA: 304 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 51.48u 0.10s 51.58t Elapsed: 00:00:33
Total cpu time: 51.53u 0.10s 51.63t Elapsed: 00:00:34
Start: Thu Aug 15 12:01:01 2013 End: Thu Aug 15 12:01:35 2013
WARNINGS ISSUED: 1