BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16118
(1070 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein 1A OS=Homo sapiens
GN=SMC1A PE=1 SV=2
Length = 1233
Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust.
Identities = 427/1146 (37%), Positives = 640/1146 (55%), Gaps = 210/1146 (18%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG L +Y++ K EM++AEE+T +Y +KK + AERKEAK EK+EA++YQR+++E+V +
Sbjct: 161 SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQ 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
V+ QLFKLYHNE +I++L EL K E+EK ++R +K E+ L+EKKKE G + RE ++
Sbjct: 221 VQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQI 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
++EI+E D E+N+KRP IK+KE SH KKL +AKKSL ++ + D+ +LE ++
Sbjct: 281 EKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEM 340
Query: 217 ADVRKRKAEYERQSI-----PGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAK 271
V K + E+E + GRD+ LE Q +K R+ K A+
Sbjct: 341 LSVEKARQEFEERMEEESQSQGRDLTLEENQ-----------VKKYHRLKEEASKRAATL 389
Query: 272 KSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAE 331
+E ++ ++D DLE ++K E E A++ + E
Sbjct: 390 AQELEKFNRDQKADQDRLDLE------ERKKVETE-------------AKIKQKLREIEE 430
Query: 332 ATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDH 391
KR K L++ T +++ +Q KL+ EL ++V E A++RID
Sbjct: 431 NQKRIEK-LEEYITTSKQSLEEQKKLEGELTEEV-------------EMAKRRID----- 471
Query: 392 IRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQ 451
E+ KEL QV+E+LGDA+ D+ E +R+++K
Sbjct: 472 ------------------------------EINKELNQVMEQLGDARIDRQESSRQQRKA 501
Query: 452 ELVENFKKAYSG-VYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLK 510
E++E+ K+ Y G VY R+I++C P K+Y +A+TKVLGK M+AI+VDSEKT R CIQY+K
Sbjct: 502 EIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIK 561
Query: 511 DHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALV 570
+ + +PETFLP+DYL+ KP E+LR + K KL+ DV++Y+P IK+ + +A NALV
Sbjct: 562 EQRGEPETFLPLDYLEVKPTDEKLREL---KGAKLVIDVIRYEPPHIKKALQYACGNALV 618
Query: 571 CETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKA 630
C+ EDA ++A+ R+ VALDGT +QKSG++SGG+ DL KA+RWD+K + LK
Sbjct: 619 CDNVEDARRIAFG--GHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKE 676
Query: 631 QKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKS--------QIAK 682
+KE+L+EEL+E MK RKE+EL VQS GL++RL YS+ DL+ TK+ + +K
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 683 LEAEIDALNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTI 742
LE+E+ P+I I+ + +R + KE+MN VED VF +FC+ IGV I
Sbjct: 737 LESELANFG-------PRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNI 789
Query: 743 RQYEEAELRSQQE-----------RQKICQDKDTKKN--------VARWERAVSDDEEEL 783
R++EE +++ Q E + ++ D +KN V WE+ V DE E+
Sbjct: 790 REFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEI 849
Query: 784 ARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQ 843
+ + E++ + +L++++ L KK V+ + E+ + R+++G K++ Q
Sbjct: 850 EKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQ 909
Query: 844 KSCVNLESKLEMKKSERHDILMNCKMNDIVLPM------------------------LRV 879
K +E+KLE K+S+RH++L CKM DI LP+ R+
Sbjct: 910 KEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRI 969
Query: 880 QKY----------------DRKLAKSIQEMTSRLQTIQ--------------APNLRAME 909
D K A++ +E+ + T+Q APN++AME
Sbjct: 970 SSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAME 1029
Query: 910 KLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID---GAGS 966
KLE ++ +T++EFE ARKRAKKAK F++IKKER+D+F CFE V+ ID A S
Sbjct: 1030 KLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALS 1089
Query: 967 ESVLPRPFLGPENPEEPLTYRVSTTIVS---------------------------HRYHP 999
+ + FLGPENPEEP ++ V+ H Y P
Sbjct: 1090 RNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKP 1149
Query: 1000 APFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICP--GS 1057
APFFVLDEIDAALDNTNIGKVA+YI ++ + Q IVISLKEEF++ A+SL+G+ P G
Sbjct: 1150 APFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGD 1209
Query: 1058 VTISSI 1063
IS +
Sbjct: 1210 CVISKV 1215
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ IE++NFKSYKG+ IGP ++FTA+IGPNGSG
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSG 37
>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein 1A OS=Bos taurus
GN=SMC1A PE=1 SV=1
Length = 1233
Score = 617 bits (1590), Expect = e-175, Method: Compositional matrix adjust.
Identities = 427/1146 (37%), Positives = 641/1146 (55%), Gaps = 210/1146 (18%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG L +Y++ K EM++AEE+T +Y +KK + AERKEAK EK+EA++YQR+++E+V +
Sbjct: 161 SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQ 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
V+ QLFKLYHNE +I++L EL K E+EK ++R +K E+ L+EKKKE G + RE ++
Sbjct: 221 VQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQI 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
++EI+E D E+N+KRP IK+KE SH KKL +AKKSL ++ + D+ +LE ++
Sbjct: 281 EKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEM 340
Query: 217 ADVRKRKAEYERQSI-----PGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAK 271
V K + E+E + GRD+ LE Q +K R+ K A+
Sbjct: 341 LSVEKARQEFEERMEEESQSQGRDLTLEENQ-----------VKKYHRLKEEASKRAATL 389
Query: 272 KSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAE 331
+E ++ ++D DLE ++K E E A++ + E
Sbjct: 390 AQELEKFNRDQKADQDRLDLE------ERKKVETE-------------AKIKQKLREIEE 430
Query: 332 ATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDH 391
KR K L++ T +++ +Q KL+ EL ++V E A++RID
Sbjct: 431 NQKRIEK-LEEYITTSKQSLEEQKKLEGELTEEV-------------EMAKRRID----- 471
Query: 392 IRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQ 451
E+ KEL QV+E+LGDA+ D+ E +R+++K
Sbjct: 472 ------------------------------EINKELNQVMEQLGDARIDRQESSRQQRKA 501
Query: 452 ELVENFKKAYSG-VYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLK 510
E++E+ K+ Y G VY R+I++C P K+Y +A+TKVLGK M+AI+VDSEKT R CIQY+K
Sbjct: 502 EIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIK 561
Query: 511 DHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALV 570
+ + +PETFLP+DYL+ KP E+LR + K KL+ DV++Y+P IK+ + +A NALV
Sbjct: 562 EQRGEPETFLPLDYLEVKPTDEKLREL---KGAKLVIDVIRYEPPHIKKALQYACGNALV 618
Query: 571 CETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKA 630
C+ EDA ++A+ R+ VALDGT +QKSG++SGG+ DL KA+RWD+K + LK
Sbjct: 619 CDNVEDARRIAFG--GHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKE 676
Query: 631 QKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKS--------QIAK 682
+KE+L+EEL+E MK RKE+EL VQS GL++RL YS+ DL+ TK+ + +K
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 683 LEAEIDALNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTI 742
LE+E+ P+I I+ + +R + KE+MN VED VF +FC+ IGV I
Sbjct: 737 LESELANFG-------PRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNI 789
Query: 743 RQYEEAELRSQQE-----------RQKICQDKDTKKN--------VARWERAVSDDEEEL 783
R++EE +++ Q E + ++ D +KN V WE+ V DE E+
Sbjct: 790 REFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEI 849
Query: 784 ARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQ 843
+ + E++ + +L++++ L KK V+ + E+ + R+++G K++ Q
Sbjct: 850 EKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQ 909
Query: 844 KSCVNLESKLEMKKSERHDILMNCKMNDIVLPMLR---------------------VQKY 882
K +E+KLE K+S+RH++L CKM DI LP+ + Q+
Sbjct: 910 KEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRT 969
Query: 883 -------------------DRKLAKSIQEMTSRLQTIQ--------------APNLRAME 909
D K A++ +E+ + T+Q APN++AME
Sbjct: 970 SNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAME 1029
Query: 910 KLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID---GAGS 966
KLE ++ +T++EFE ARKRAKKAK F++IKKER+D+F CFE V+ ID A S
Sbjct: 1030 KLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALS 1089
Query: 967 ESVLPRPFLGPENPEEPLTYRVSTTIVS---------------------------HRYHP 999
+ + FLGPENPEEP ++ V+ H Y P
Sbjct: 1090 RNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKP 1149
Query: 1000 APFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICP--GS 1057
APFFVLDEIDAALDNTNIGKVA+YI ++ + Q IVISLKEEF++ A+SL+G+ P G
Sbjct: 1150 APFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGD 1209
Query: 1058 VTISSI 1063
IS +
Sbjct: 1210 CVISKV 1215
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ IE++NFKSYKG+ IGP ++FTA+IGPNGSG
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSG 37
>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein 1A OS=Mus musculus
GN=Smc1a PE=1 SV=4
Length = 1233
Score = 617 bits (1590), Expect = e-175, Method: Compositional matrix adjust.
Identities = 427/1146 (37%), Positives = 641/1146 (55%), Gaps = 210/1146 (18%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG L +Y++ K EM++AEE+T +Y +KK + AERKEAK EK+EA++YQR+++E+V +
Sbjct: 161 SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQ 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
V+ QLFKLYHNE +I++L EL K E+EK ++R +K E+ L+EKKKE G + RE ++
Sbjct: 221 VQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQI 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
++EI+E D E+N+KRP IK+KE SH KKL +AKKSL ++ + D+ +LE ++
Sbjct: 281 EKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEM 340
Query: 217 ADVRKRKAEYERQSI-----PGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAK 271
V K + E+E + GRD+ LE Q +K R+ K A+
Sbjct: 341 LSVEKARQEFEERMEEESQSQGRDLTLEENQ-----------VKKYHRLKEEASKRAATL 389
Query: 272 KSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAE 331
+E ++ ++D DLE ++K E E A++ + E
Sbjct: 390 AQELEKFNRDQKADQDRLDLE------ERKKVETE-------------AKIKQKLREIEE 430
Query: 332 ATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDH 391
KR K L++ T +++ +Q KL+ EL ++V E A++RID
Sbjct: 431 NQKRIEK-LEEYITTSKQSLEEQKKLEGELTEEV-------------EMAKRRID----- 471
Query: 392 IRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQ 451
E+ KEL QV+E+LGDA+ D+ E +R+++K
Sbjct: 472 ------------------------------EINKELNQVMEQLGDARIDRQESSRQQRKA 501
Query: 452 ELVENFKKAYSG-VYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLK 510
E++E+ K+ Y G VY R+I++C P K+Y +A+TKVLGK M+AI+VDSEKT R CIQY+K
Sbjct: 502 EIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIK 561
Query: 511 DHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALV 570
+ + +PETFLP+DYL+ KP E+LR + K KL+ DV++Y+P IK+ + +A NALV
Sbjct: 562 EQRGEPETFLPLDYLEVKPTDEKLREL---KGAKLVIDVIRYEPPHIKKALQYACGNALV 618
Query: 571 CETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKA 630
C+ EDA ++A+ R+ VALDGT +QKSG++SGG+ DL KA+RWD+K + LK
Sbjct: 619 CDNVEDARRIAFG--GHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKE 676
Query: 631 QKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKS--------QIAK 682
+KE+L+EEL+E MK RKE+EL VQS GL++RL YS+ DL+ TK+ + +K
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 683 LEAEIDALNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTI 742
LE+E+ P+I I+ + +R + KE+MN VED VF +FC+ IGV I
Sbjct: 737 LESELANFG-------PRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNI 789
Query: 743 RQYEEAELRSQQE-----------RQKICQDKDTKKN--------VARWERAVSDDEEEL 783
R++EE +++ Q E + ++ D +KN V WE+ V DE E+
Sbjct: 790 REFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEI 849
Query: 784 ARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQ 843
+ + E++ + +L++++ L KK V+ + E+ + R+++G K++ Q
Sbjct: 850 EKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQ 909
Query: 844 KSCVNLESKLEMKKSERHDILMNCKMNDIVLPMLR---------------------VQKY 882
K +E+KLE K+S+RH++L CKM DI LP+ + Q+
Sbjct: 910 KEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEESVSGSQRT 969
Query: 883 -------------------DRKLAKSIQEMTSRLQTIQ--------------APNLRAME 909
D K A++ +E+ + T+Q APN++AME
Sbjct: 970 SSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAME 1029
Query: 910 KLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID---GAGS 966
KLE ++ +T++EFE ARKRAKKAK F++IKKER+D+F CFE V+ ID A S
Sbjct: 1030 KLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALS 1089
Query: 967 ESVLPRPFLGPENPEEPLTYRVSTTIVS---------------------------HRYHP 999
+ + FLGPENPEEP ++ V+ H Y P
Sbjct: 1090 RNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKP 1149
Query: 1000 APFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICP--GS 1057
APFFVLDEIDAALDNTNIGKVA+YI ++ + Q IVISLKEEF++ A+SL+G+ P G
Sbjct: 1150 APFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGD 1209
Query: 1058 VTISSI 1063
IS +
Sbjct: 1210 CVISKV 1215
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ IE++NFKSYKG+ IGP ++FTA+IGPNGSG
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSG 37
>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus
GN=Smc1a PE=1 SV=1
Length = 1233
Score = 613 bits (1580), Expect = e-174, Method: Compositional matrix adjust.
Identities = 426/1146 (37%), Positives = 640/1146 (55%), Gaps = 210/1146 (18%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG L +Y++ K EM++AEE+T +Y +KK + AERKEAK EK+EA++YQ +++E+V +
Sbjct: 161 SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQALKDEVVRAQ 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
V+ QLFKLYHNE +I++L EL K E+EK ++R +K E+ L+EKKKE G + RE ++
Sbjct: 221 VQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQI 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
++EI+E D E+N+KRP IK+KE SH KKL +AKKSL ++ + D+ +LE ++
Sbjct: 281 EKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNRQKHYKKRKGDMDELEKEM 340
Query: 217 ADVRKRKAEYERQSI-----PGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAK 271
V K + E+E + GRD+ LE Q +K R+ K A+
Sbjct: 341 LSVEKARQEFEERMEEESQSQGRDLTLEENQ-----------VKKYHRLKEEASKRAATL 389
Query: 272 KSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAE 331
+E ++ ++D DLE ++K E E A++ + E
Sbjct: 390 AQELEKFNRDQKADQDRLDLE------ERKKVETE-------------AKIKQKLREIEE 430
Query: 332 ATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDH 391
KR K L++ T +++ +Q KL+ EL ++V E A++RID
Sbjct: 431 NQKRIEK-LEEYITTSKQSLEEQKKLEGELTEEV-------------EMAKRRID----- 471
Query: 392 IRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQ 451
E+ KEL QV+E+LGDA+ D+ E +R+++K
Sbjct: 472 ------------------------------EINKELNQVMEQLGDARIDRQESSRQQRKA 501
Query: 452 ELVENFKKAYSG-VYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLK 510
E++E+ K+ Y G VY R+I++C P K+Y +A+TKVLGK M+AI+VDSEKT R CIQY+K
Sbjct: 502 EIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIK 561
Query: 511 DHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALV 570
+ + +PETFLP+DYL+ KP E+LR + K KL+ DV++Y+P IK+ + +A NALV
Sbjct: 562 EQRGEPETFLPLDYLEVKPTDEKLREL---KGAKLVIDVIRYEPPHIKKALQYACGNALV 618
Query: 571 CETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKA 630
C+ EDA ++A+ R+ VALDGT +QKSG++SGG+ DL KA+RWD+K + LK
Sbjct: 619 CDNVEDARRIAFG--GHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKE 676
Query: 631 QKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKS--------QIAK 682
+KE+L+EEL+E MK RKE+EL VQS GL++RL YS+ DL+ TK+ + +K
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 683 LEAEIDALNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTI 742
LE+E+ P+I I+ + +R + KE+MN VED VF +FC+ IGV I
Sbjct: 737 LESELANFG-------PRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNI 789
Query: 743 RQYEEAELRSQQE-----------RQKICQDKDTKKN--------VARWERAVSDDEEEL 783
R++EE +++ Q E + ++ D +KN V WE+ V DE E+
Sbjct: 790 REFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEI 849
Query: 784 ARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQ 843
+ + E++ + +L++++ L KK V+ + E+ + R+++G K++ Q
Sbjct: 850 EKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQ 909
Query: 844 KSCVNLESKLEMKKSERHDILMNCKMNDIVLPMLR---------------------VQKY 882
K +E+KLE K+S+RH++L CKM DI LP+ + Q+
Sbjct: 910 KEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGEESVSGSQRT 969
Query: 883 -------------------DRKLAKSIQEMTSRLQTIQ--------------APNLRAME 909
D K A++ +E+ + T+Q APN++AME
Sbjct: 970 SSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAME 1029
Query: 910 KLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID---GAGS 966
KLE ++ +T++EFE ARKRAKKAK F++IKKER+D+F CFE V+ ID A S
Sbjct: 1030 KLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALS 1089
Query: 967 ESVLPRPFLGPENPEEPLTYRVSTTIVS---------------------------HRYHP 999
+ + FLGPENPEEP ++ V+ H Y P
Sbjct: 1090 RNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKP 1149
Query: 1000 APFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICP--GS 1057
APFFVLDEIDAALDNTNIGKVA+YI ++ + Q IVISLKEEF++ A+SL+G+ P G
Sbjct: 1150 APFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGD 1209
Query: 1058 VTISSI 1063
IS +
Sbjct: 1210 CVISKV 1215
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ IE++NFKSYKG+ IGP ++FTA+IGPNGSG
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSG 37
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein 1A OS=Xenopus laevis
GN=smc1a PE=1 SV=1
Length = 1232
Score = 577 bits (1488), Expect = e-163, Method: Compositional matrix adjust.
Identities = 368/941 (39%), Positives = 550/941 (58%), Gaps = 131/941 (13%)
Query: 242 QDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKR 301
+D E+N+K P IK+KE SH KK +AKKSL ++ + D+ +LE ++ V K
Sbjct: 287 KDAELNQKLPQYIKAKENPSHKIKKFRAAKKSLQNAQKQYKKRKADMDELEKEMLSVEKA 346
Query: 302 KAEYERQSIP-----GRDINLESAQMTEYTNLKAEATKRAGKILQQLDTINREQKGDQDK 356
+ E+E + GRD+ LE Q+ +Y LK EA+KRA + Q+L+ NR+QK DQD+
Sbjct: 347 RQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDR 406
Query: 357 LDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSS 416
LD E R++V+T+ +IK+K E+EE QKRI+KLE++I ++ SL++ K L+E L +V +
Sbjct: 407 LDLEERKKVETEAKIKQKLRELEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMA 466
Query: 417 KNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAYSG-VYDRMINMCHPV 475
K R+ E+ EL QV+E+LGDA+ D+ E +R+++K E++E+ K+ Y G VY R+I++C P
Sbjct: 467 KRRIDEINSELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPT 526
Query: 476 HKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLR 535
K+Y +A+TKVLGK M+AI+VDSEKT R CIQY+K+ + +PETFLP+DYL+ KP ERLR
Sbjct: 527 QKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDERLR 586
Query: 536 NIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVAL 595
+ K KL+ DV++Y+P IK+ + +A NALVC+ EDA ++A+ R+ VAL
Sbjct: 587 EL---KGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG--GHQRHKTVAL 641
Query: 596 DGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREAMKKSRKESELNTV 655
DGT +QKSG++SGG+ DL KA+RWD+K + LK +KE+L+EEL+E MK RKE+EL V
Sbjct: 642 DGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQV 701
Query: 656 QSTIKGLEIRLNYSRQDLQNTKS--------QIAKLEAEIDALNARADATEPKIKAIEAS 707
QS GL++RL YS+ DL+ TK+ + +KLE+E+ + P+I I+
Sbjct: 702 QSQAHGLQMRLKYSQSDLEQTKTRHLAMNMQEKSKLESELANFS-------PRINDIKRI 754
Query: 708 MTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQYEEAELRSQQE-----------R 756
+ +R + KE+MN VED VF +FC+ IGV IR++EE +++ Q E +
Sbjct: 755 IQSRDREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQK 814
Query: 757 QKICQDKDTKKN--------VARWERAVSDDEEELARAQGAEEKLAGEMRAEADKLENMR 808
++ D +KN V WE++V D+ E+ + + E++ + +L++++
Sbjct: 815 TRLGIQLDYEKNQLKEDQGKVQTWEQSVKKDDNEIEKLKKEEQRHMKIIDETMAQLQDLK 874
Query: 809 ATRLTKKQAVDA-------MDEEIGKARREVGSIAKDIQAAQ--------------KSCV 847
L KK V+ + +++G A +EV + K++ A + ++C
Sbjct: 875 NQHLAKKSEVNDKNHLMEDIRKKLGSANKEVTHLQKEVTAIETKLEQKRSDRHNLLQACK 934
Query: 848 NLESKLEMKKSERHDI---------------------------LMNCKMNDIVLPMLRVQ 880
+ KL + K DI L+ +D+ +
Sbjct: 935 MSDIKLPLSKGTMDDISQEEGSSQGEESASSSQRSSTVYAKEALIEIDYSDLSEDLKDAV 994
Query: 881 KYD------RKLAKSIQEMTSRLQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKK 934
D L + I E S LQ I APN++AMEKLE ++ +T++EFE ARKRAKK
Sbjct: 995 ADDDIKQEMSALHQKINEQQSILQRISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKK 1054
Query: 935 AKANFDRIKKERYDKFTRCFEHVSNEID---GAGSESVLPRPFLGPENPEEPLTYRVSTT 991
AK F++ KKER+D+F CFE V+ ID A S + + FLGPENPEEP ++
Sbjct: 1055 AKQAFEQTKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYN 1114
Query: 992 IVS---------------------------HRYHPAPFFVLDEIDAALDNTNIGKVASYI 1024
V+ H Y P+PFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1115 CVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPSPFFVLDEIDAALDNTNIGKVANYI 1174
Query: 1025 VTKTQDSLQTIVISLKEEFFSHADSLVGICP--GSVTISSI 1063
++ + Q IVISLKEEF++ A+SL+G+ P G IS +
Sbjct: 1175 KEQSMSNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKV 1215
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 138/211 (65%), Gaps = 5/211 (2%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG L +Y++ K EM++AEE+T +Y +KK + AERKEAK EK+EAE+YQR+++E+ +
Sbjct: 161 SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARAQ 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
++ QLFKLYHNE++I++L EL K +EK ++ +K E L++KKKE G + RE +
Sbjct: 221 IQLQLFKLYHNESEIEKLNKELSVKNKGIEKDKKHMDKVEEELKDKKKELGKMMREQQAI 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
++EI+E D E+N+K P IK+KE SH KK +AKKSL ++ + D+ +LE ++
Sbjct: 281 EKEIKEKDAELNQKLPQYIKAKENPSHKIKKFRAAKKSLQNAQKQYKKRKADMDELEKEM 340
Query: 217 ADVRKRKAEYERQSIP-----GRDINLESAQ 242
V K + E+E + GRD+ LE Q
Sbjct: 341 LSVEKARQEFEERMEEESQSQGRDLTLEENQ 371
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ IE++NFKSYKG+ IGP +FTA+IGPNGSG
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFHRFTAIIGPNGSG 37
>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein 1B OS=Homo sapiens
GN=SMC1B PE=1 SV=2
Length = 1235
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 362/1125 (32%), Positives = 584/1125 (51%), Gaps = 190/1125 (16%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG L +YE K ++ +AEE+ ++ KKK + AER++AK+EK+EAE+YQ + EE+ +
Sbjct: 161 SGELIGEYEEKKRKLQKAEEDAQFNFNKKKNIAAERRQAKLEKEEAERYQSLLEELKMNK 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
++ QLF+LYHNE I L +L+ ++ ENI++ +KKE G L R+L +
Sbjct: 221 IQLQLFQLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKEHGMLTRQLQQT 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
++E++ ++ +N+KRP IK+KE SH KKL AKKS+ + + DI LET+L
Sbjct: 281 EKELKSVETLLNQKRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETEL 340
Query: 217 ADVRKRKAEYERQS-----IPGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAK 271
AD+ +E+Q RDI LE++Q L + KE ++KK+A+
Sbjct: 341 ADLDAAWRSFEKQIEEEILHKKRDIELEASQ----------LDRYKELKEQVRKKVATMT 390
Query: 272 KSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAE 331
+ L +++ ++K + ER + R
Sbjct: 391 QQLEKLQW--------------------EQKTDEERLAFEKR------------------ 412
Query: 332 ATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDH 391
R G++ L I +EQ D K +L + +T + K++ + EE L D
Sbjct: 413 ---RHGEVQGNLKQI-KEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEET------LVDE 462
Query: 392 IRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQ 451
I + ++ + + EELN ++ EL+ +A D HE R++K+
Sbjct: 463 IEKTKSRMSE---FNEELNL-----------IRSELQ-------NAGIDTHEGKRQQKRA 501
Query: 452 ELVENFKKAY-SGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLK 510
E++E+ K+ Y V+ R+ ++CHP+HK+Y +A+TKV G+++ AIVV SEK A+ CI++LK
Sbjct: 502 EVLEHLKRLYPDSVFGRLFDLCHPIHKKYQLAVTKVFGRFITAIVVASEKVAKDCIRFLK 561
Query: 511 DHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALV 570
+ + +PETFL +DYL KP+ ERLR + K K++ DV+K Q +K+V+ F N LV
Sbjct: 562 EERAEPETFLALDYLDIKPINERLREL---KGCKMVIDVIKTQFPQLKKVIQFVCGNGLV 618
Query: 571 CETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKA 630
CET E+A +A + R VALDGT + KSG++SGGS DL KA+ WD+KE+ NL+
Sbjct: 619 CETMEEARHIA--LSGPERQKTVALDGTLFLKSGVISGGSSDLKYKARCWDEKELKNLRD 676
Query: 631 QKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNT-KSQIAKLEAEIDA 689
++ + +EL+ MK RKE++L +Q+ I+G + RL YS+ +L+ K + E
Sbjct: 677 RRSQKIQELKGLMKTLRKETDLKQIQTLIQGTQTRLKYSQNELEMIKKKHLVAFYQEQSQ 736
Query: 690 LNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQYEEAE 749
L + E + + + R I +E+++ VED +F+ FC+ IGV IR++E
Sbjct: 737 LQSELLNIESQCIMLSEGIKERQRRIKEFQEKIDKVEDDIFQHFCEEIGVENIREFENKH 796
Query: 750 LRSQQE---RQKICQDKDTKKNV-ARWERA---------------VSDDEEELARAQGAE 790
++ QQE ++ + T+ NV + R+ + E++ + AE
Sbjct: 797 VKRQQEIDQKRYFYKKMLTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAE 856
Query: 791 EKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSCVNLE 850
E + K + ++ R+T+ + + + +I + R++ ++ +++ QK V+++
Sbjct: 857 ENCLQTVNELMAKQQQLKDIRVTQNSSAEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQ 916
Query: 851 SKLEMKKSERHDILMNCKMNDIVLPMLRVQ------------------------------ 880
+ LE K+ E+H++L++CK+ DI + +L
Sbjct: 917 TSLEQKRLEKHNLLLDCKVQDIEIILLSGSLDDIIEVEMGTEAESTQATIDIYEKEEAFE 976
Query: 881 ------KYDRKLAKSIQEMTSRLQTI--------------QAPNLRAMEKLEHAKENLMK 920
K D K +S QE+ + L+ + APNLRA+E L+ ++ +
Sbjct: 977 IDYSSLKEDLKALQSDQEIEAHLRLLLQQVASQEDILLKTAAPNLRALENLKTVRDKFQE 1036
Query: 921 TNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEIDGAGSESV---LPRPFLGP 977
+ + FE +RK A+ + F+++KK RYD FT+CFEHVS ID + + FL P
Sbjct: 1037 STDAFEASRKEARLCRQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLSP 1096
Query: 978 ENPEEPLTYRVSTTIVS---------------------------HRYHPAPFFVLDEIDA 1010
ENPEEP +S V+ H + PAPFFVLDE+DA
Sbjct: 1097 ENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDA 1156
Query: 1011 ALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICP 1055
ALDNTNIGKV+SYI +TQD Q IVISLKEEF+S AD+L+GI P
Sbjct: 1157 ALDNTNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYP 1201
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 5 LQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ + V+NFKS++G+ IGP ++FT +IGPNGSG
Sbjct: 4 LELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSG 37
>sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes protein 1B OS=Mus musculus
GN=Smc1b PE=1 SV=1
Length = 1248
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 309/915 (33%), Positives = 507/915 (55%), Gaps = 110/915 (12%)
Query: 246 INKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEY 305
+N+KRP IK+KE SH KKL +KK + + + I L +LAD+ + +
Sbjct: 291 LNQKRPQYIKAKENTSHHLKKLDLSKKLITDNEKQCSKQEDGIRALVAELADLDRAWKSF 350
Query: 306 ERQS-----IPGRDINLESAQMTEYTNLKAEATKRAGKILQQLDTINREQKGDQDKLDNE 360
E+Q GRDI LE++Q+ Y LK + ++ G + QQL+ + EQK ++++L E
Sbjct: 351 EKQMEEKILQKGRDIELENSQLDRYKLLKEQVRRKVGIMTQQLEKLQWEQKAEKERLAFE 410
Query: 361 LRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSSKNRV 420
R+ TQ +K+ + ++EE +KRI+KLE++ + L+D K+ +E L ++ ++K+R+
Sbjct: 411 KRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKTCMDCLEDKKQQEEALKKEIENTKSRM 470
Query: 421 QELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAYS-GVYDRMINMCHPVHKRY 479
E+ +EL + EL +A D HE R++K+ E++E+ K+ Y V+ R++++CHP+HK+Y
Sbjct: 471 SEVNEELSLIRNELQNAGIDNHEGKRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKY 530
Query: 480 NVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRD 539
+A+TK+ G+YM AIVV SEK A+ CI++LK + +PETFL +DYL KP+ ERLR I
Sbjct: 531 QLAVTKLFGRYMVAIVVASEKIAKDCIRFLKAERAEPETFLALDYLDIKPINERLREI-- 588
Query: 540 PKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTF 599
K K++ DV+K Q +K+V+ F N LVCET E+A +A+ P+ R AVALDGT
Sbjct: 589 -KGCKMMIDVIKTQFPQLKKVIQFVCGNGLVCETVEEARHIAFG-GPERR-KAVALDGTL 645
Query: 600 YQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREAMKKSRKESELNTVQSTI 659
+ KSG++SGGS DL KA WD+KE+ NL+ ++ +L +EL+E MK RKE++L +Q+ +
Sbjct: 646 FLKSGVISGGSSDLKHKALCWDEKELHNLRDKRSQLVQELKELMKTLRKETDLKQIQTLV 705
Query: 660 KGLEIRLNYSRQDLQNT-KSQIAKLEAEIDALNARADATEPKIKAIEASMTARGDTISRK 718
+G RL YS+ +L+ K +A E L + + + + + + I
Sbjct: 706 QGTNTRLKYSQNELEMIKKKHLATFYREQSQLQSELLNIDSQCTMLSEGINKQQQKIEEF 765
Query: 719 KEEMNSVEDIVFRDFCKSIGVSTIRQYEEAELRSQQ---------ERQKI---------- 759
+++++ VED +F+DFC+ IGV IR++E ++ QQ E+QK
Sbjct: 766 QDKIDEVEDDIFQDFCEEIGVENIREFENKHVKQQQENDQKRLEFEKQKTRLNIQLEYSR 825
Query: 760 CQDKDTKKNVARWERAVSDDEEELARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVD 819
Q K N+ + + +E++ + EE+ + K E ++ T+ ++
Sbjct: 826 NQLKKKLNNIDTLKTTIQKGKEDIDNLKKTEEECLKIVEELMVKQEQIKEVLATQSSNIE 885
Query: 820 AMDEEIGKARREVGSIAKDIQAAQKSCVNLESKLEMKKSERHDILMNCKMNDIVLPM--- 876
+ +I + R++V ++ +++ QK V ++ LE K E+H++L++CK+ DI + +
Sbjct: 886 KIHIQIEEERKKVLAVDREVGKLQKEVVIIQGSLEQKLLEKHNLLLDCKVQDIDISLVLG 945
Query: 877 ---------------------------------------LRVQKYDRK----LAKSIQEM 893
L+ + D++ L +Q++
Sbjct: 946 SLEDIIEMELTETESTQATADIYEKEASIQIDYSPLREDLKALQSDKEVEAHLTLLLQQV 1005
Query: 894 TSRLQTI---QAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKF 950
S+ T+ APNLRA E L+ ++ ++ + FE +RK A+ + F+++K+ RYD F
Sbjct: 1006 ASQENTLLKTTAPNLRAQENLKTVRDKFQESADVFEASRKEARICRQEFEQVKRRRYDAF 1065
Query: 951 TRCFEHVSNEIDGAGSESV---LPRPFLGPENPEEPLTYRVSTTIVS------------- 994
++CFEH+S ID + + FL PENPEEP +S V+
Sbjct: 1066 SQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSG 1125
Query: 995 --------------HRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLK 1040
H + PAPFFVLDE+DAALDNTNIGKV+SYI ++Q+ Q I+ISLK
Sbjct: 1126 GEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQSQEQFQMIIISLK 1185
Query: 1041 EEFFSHADSLVGICP 1055
EEF+S AD+L+G+ P
Sbjct: 1186 EEFYSKADALIGVYP 1200
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 5/211 (2%)
Query: 37 SGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKE 96
SG +YE K ++ +AEE+ + KK V AERK AKIEK+EAE YQ + EE+ +
Sbjct: 161 SGEFIGEYEAKKKKLQKAEEDAQFHFNVKKNVAAERKHAKIEKEEAEHYQNLLEELKINK 220
Query: 97 VEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKV 156
++ LF+LY+NE I L EL++ G + ++ ENI + KKK+ G L R+L +
Sbjct: 221 IQLMLFQLYYNEEKINVLNTELEQMDGNLSVVKDTLSHHENIFKAKKKDYGMLTRQLQQT 280
Query: 157 DQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQL 216
+E++ ++ +N+KRP IK+KE SH KKL +KK + + + I L +L
Sbjct: 281 AKELKSVEAILNQKRPQYIKAKENTSHHLKKLDLSKKLITDNEKQCSKQEDGIRALVAEL 340
Query: 217 ADVRKRKAEYERQS-----IPGRDINLESAQ 242
AD+ + +E+Q GRDI LE++Q
Sbjct: 341 ADLDRAWKSFEKQMEEKILQKGRDIELENSQ 371
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 5 LQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ + V+NFKS++G+ IGP K+FT +IGPNGSG
Sbjct: 4 LELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSG 37
>sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1 OS=Arabidopsis
thaliana GN=SMC1 PE=2 SV=2
Length = 1218
Score = 340 bits (873), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 312/1158 (26%), Positives = 569/1158 (49%), Gaps = 211/1158 (18%)
Query: 8 IEVDNFKSYKGKF----SIGPLKKFTAVIGP-NGSGALKDDYERLKAEMIQAEEETNMSY 62
++ NF ++G S P K+ T ++ +GS LK +YE L+ + AEE+ + Y
Sbjct: 138 VKARNFLVFQGDVESIASKNP-KELTGLLEEISGSEELKKEYEGLEEKKASAEEKAALIY 196
Query: 63 LKKKGVVAERKEAKIEKDEAEKYQRIREEIVAKEVEHQLFKLYHNETDIKELEDELDKKK 122
KKK + E+K K +K+EAEK+ R++EE+ A + E L++LY+ E DI++ +++D +K
Sbjct: 197 QKKKTIGNEKKLKKAQKEEAEKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEK 256
Query: 123 GEVEKIERRKEKAENILREKKKEQGALNRELAKVDQEIREMDVEINKKRPSLIKSKERVS 182
+ + R EK E ++K EQ +E+A+ +++I E ++ K +P L++ KE ++
Sbjct: 257 SNRKDVMRELEKFEREAGKRKVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIA 316
Query: 183 HIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQ 242
I+ K+ + +K + + ++ H+K+I ++ + ++ K+ +
Sbjct: 317 RIKAKIETNRKDVDKRKKEKGKHSKEIEQMQKSIKELNKKMELF---------------- 360
Query: 243 DVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRK 302
NKKR +S K + L++QL D + K
Sbjct: 361 ----NKKRQD---------------SSGKLPM----------------LDSQLQDYFRLK 385
Query: 303 AEYERQSIPGRDINLESAQMTEYTNLKAEATKRAGKILQQLDTINREQKGDQDKLDNELR 362
E ++I RD + E + T+L EA + + QQL INR ++ LD +++
Sbjct: 386 EEAGMKTIKLRDEH-EVLERQRRTDL--EALRNLEENYQQL--INR-----KNDLDEQIK 435
Query: 363 QQVQTQNEIK----KKRHEMEEAQKRIDKL-EDHIRQNEASLKDNKKLKEELNSDVGSSK 417
+ Q EI+ K ++E + + L E H+ EAS K K
Sbjct: 436 RFKDRQGEIETSSSKYKNETTSLKTELRALQEKHVNAREASAK---------------LK 480
Query: 418 NRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAYSGVYDRMINMCHPVHK 477
R+ EL+ ++L D +++E+ R + + VE+ K+ + GV+ RM ++C P K
Sbjct: 481 TRIAELE-------DQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRK 533
Query: 478 RYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNI 537
+YN+A+T +G++M+A+VV+ E T + CI+YLK+ +L P TF+P+ ++ K + ERLRN+
Sbjct: 534 KYNLAVTVAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNL 593
Query: 538 RDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDG 597
KL++DV+++ PE +++ VL+A N LVC+ E+A +++ E R+ V +DG
Sbjct: 594 --GGTAKLVFDVIQFDPE-LEKAVLYAVGNTLVCDELEEAKVLSWSGE---RFKVVTVDG 647
Query: 598 TFYQKSGIMSGGSLDLAR-KAKRWDDKEMGNLKAQKEKLSEELREAMKKSR----KESEL 652
K+G M+GG+ K+ +WDDK++ LK KE ++L E + R KESE
Sbjct: 648 ILLTKAGTMTGGTSGGMEAKSNKWDDKKIEGLKKNKEDFEQQL-ENIGSIREMQMKESE- 705
Query: 653 NTVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDALNARADATEPKIKAIEASMTARG 712
+ I GLE ++ Y+ + ++ K ++ +LE E + D +P++ + R
Sbjct: 706 --ISGKISGLEKKIQYAEIEKKSIKDKLPQLEQEERNIIEEIDRIKPELSKARTEVDKRK 763
Query: 713 DTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQYEEAELRS----QQERQKIC-------- 760
+++ ++ MN + D +++DF +S+GV IR YEE +L++ +ER ++
Sbjct: 764 TEMNKLEKRMNEIVDRIYKDFSQSVGVPNIRVYEETQLKTAEKEAEERLELSNQLAKLKY 823
Query: 761 -----QDKDTKKNVARWERAVSDDEEELARAQGAEEKLAGEMRAEA----DKLENMRATR 811
Q++D + + E ++S E +L Q K E + A +++ N +
Sbjct: 824 QLEYEQNRDVGSRIRKIESSISSLETDLEGIQ----KTMSERKETAVKITNEINNWKKEM 879
Query: 812 LTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSCVNLESKLEMKKSERHDILMNCKMND 871
KQ + ++EI +++ I + + E+++E S++ +I C++
Sbjct: 880 EECKQKSEEYEKEILDWKKQASQATTSITKLNRQIHSKETQIEQLISQKQEITEKCELEH 939
Query: 872 IVLPMLR------------------------------VQKYDRKLAKSIQEMTSRLQTIQ 901
I LP+L +K + + + I+ TS ++
Sbjct: 940 ITLPVLSDAMEEDDSDGPQFDFSELGRAYLQERRPSAREKVEAEFRQKIESKTSEIERT- 998
Query: 902 APNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEI 961
APNLRA+++ E +E + ++EFE ARK K+ F+ +K++RY+ F F H+++ I
Sbjct: 999 APNLRALDQYEAIQEKEKQVSQEFEAARKEEKQVADAFNTVKQKRYELFMEAFNHIASNI 1058
Query: 962 D-------GAGSESVLPRPFLGPENPEEPLTYRVSTTIVS-------------------- 994
D + + + +L EN ++P + + T +
Sbjct: 1059 DKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAA 1118
Query: 995 -------HRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKT-------QDS-----LQTI 1035
H Y P+PFF+LDE+DAALDN N+ KVA +I +K+ QD+ Q+I
Sbjct: 1119 LALLFSIHSYRPSPFFILDEVDAALDNLNVAKVAKFIRSKSCQAARDNQDAEDGNGFQSI 1178
Query: 1036 VISLKEEFFSHADSLVGI 1053
VISLK+ F+ A++LVG+
Sbjct: 1179 VISLKDSFYDKAEALVGV 1196
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
ILQ +E++NFKSYKG +GP K FTA+IGPNGSG
Sbjct: 11 ILQ-LEMENFKSYKGHQLVGPFKDFTAIIGPNGSG 44
>sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=psm1 PE=1 SV=2
Length = 1228
Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/933 (27%), Positives = 423/933 (45%), Gaps = 151/933 (16%)
Query: 246 INKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEY 305
I KRP LI E+ + L ++ E+ + + LE QL + + E+
Sbjct: 301 IASKRPELISIAEKALESKSNLRKIQRKAAEIEKDYSDQASTLQVLENQLTSLSAAEKEF 360
Query: 306 -----ERQSIPGRDINLESAQMTEYTNLKAEATKRAGKILQQLDTINREQKGDQDKLDNE 360
E++ + G + L EY L++EA K +L +L T+NR K D+
Sbjct: 361 LKDMQEKEQLKG--LRLLPEDKEEYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSL 418
Query: 361 LRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSSKNRV 420
+++IK + L I + SL+ K +++ ++
Sbjct: 419 TSIVGDLESKIKSLHESVSSLDTERADLLAKINEKIESLELEKHDQQKKRLTYSELFHKT 478
Query: 421 QELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAYSGVYDRMINMCHPVHKRYN 480
QEL +EL+ ++++ +A D++E + KK+E + K+ Y V R+I++C P K+Y
Sbjct: 479 QELNEELQSCLQKILEASADRNESKQDAKKREALYALKRIYPEVKGRIIDLCTPTQKKYE 538
Query: 481 VAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDP 540
AI LGK +AIVV+++ A+ CI Y+K+ ++ TF P+D + P+ ++ R
Sbjct: 539 SAIAAALGKNFDAIVVETQAVAKECIDYIKEQRIGIMTFFPMDTIAASPVNQKFRGTH-- 596
Query: 541 KNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDA--VALDGT 598
K +L DVL ++ E +RV++ A N L+C D+M VA D+ R +A V L+GT
Sbjct: 597 KGARLAIDVLNFESE-YERVMISAVGNTLIC----DSMTVARDLSYNKRLNAKTVTLEGT 651
Query: 599 FYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREA-MKKSR---KESE--- 651
K+G+++GGS + R AK WDD + L K++L ++ E +KS ES+
Sbjct: 652 VIHKTGLITGGSSN-NRSAKHWDDHDFDLLTQTKDRLMHQIGEIEYQKSSCVITESDTVK 710
Query: 652 LNTVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDALNARADATEPKIKAIEASMTAR 711
L++++S I L+ + + +++ K +I E+ I +P + +E M R
Sbjct: 711 LHSLESEISLLKDKYTVVSRSVEDKKKEIGHYESLIKE-------KQPHLSELE--MELR 761
Query: 712 GDTISRKKEEMN--SVEDIVFRDFCKSIGVSTIRQYEEA--------------------- 748
SR + ++ VE+ +F FCK IG+S I Y+E
Sbjct: 762 NFVKSRDELQIQVEKVEEKIFSGFCKRIGISDIHTYDEIHRTFTQSFTQKQLEFTKQKSL 821
Query: 749 -ELRSQQERQKICQDKDTKKNVARWERAVSDDEEELARAQGAEEKLAGEMRAEADKLENM 807
E R E+Q++ DT+ + R + + D+E + + E L E+ +LE +
Sbjct: 822 LENRISFEKQRVS---DTRLRLERMHKFIEKDQESIDNYEQNREALESEVATAEAELELL 878
Query: 808 R---ATRLTKKQAVDAMDEEIGKARREVGS-IAKDIQAAQKSCVNLESKLEMKKSERHDI 863
+ A+ +K + + E ++ VG + ++ + LES+++ SE H I
Sbjct: 879 KEDFASENSKTEKILLAASE----KKLVGKRLVSELTKLSGNITLLESEIDRYVSEWHAI 934
Query: 864 LMNCKMNDIVLP-----------------------------MLRVQKY---------DRK 885
L CK+ DI +P ++ +K+ D +
Sbjct: 935 LRKCKLEDIDVPLREGSLTSIPIDDVSNSGDITMGEEPSEPVINFEKFGVEVDYDELDEE 994
Query: 886 LAKSIQE-MTSRLQ----------TIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKK 934
L E M S LQ +PNLRA+E+LE + L K +EEF ARK AK
Sbjct: 995 LRNDGSESMASVLQEKLREYSEELDQMSPNLRAIERLETVETRLAKLDEEFAAARKAAKN 1054
Query: 935 AKANFDRIKKERYDKFTRCFEHVSNEIDG-------------AGSESV----LPRPFLG- 976
AK F+ +K++R KF F H+S +ID G+ + L P+LG
Sbjct: 1055 AKERFNAVKQKRLQKFQAAFSHISEQIDPIYKELTKSPAFPLGGTAYLTLDDLDEPYLGG 1114
Query: 977 ------PE----------NPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKV 1020
P + E ++ H Y P+PFFVLDEIDAALD TN+ K+
Sbjct: 1115 IKFHAMPPMKRFRDMDQLSGGEKTMAALALLFAIHSYQPSPFFVLDEIDAALDQTNVTKI 1174
Query: 1021 ASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
A+YI Q +VISLK + FS +++LVGI
Sbjct: 1175 ANYIRQHASSGFQFVVISLKNQLFSKSEALVGI 1207
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 12 NFKSYKGKF----SIGPLKKFTAVIGPNGSGALKDDYERLKAEMIQAEEETNMSYLKKKG 67
NF ++G S PL+ V +GS K +Y++ K E +A + S+ KK+G
Sbjct: 142 NFLVFQGDVETIASQSPLELSKLVEQISGSLEYKSEYDKSKDEQDKAVNLSAHSFNKKRG 201
Query: 68 VVAERKEAKIEKDEAEKYQRIREEIVAKEVEHQLFKLYHNETDIKELEDELDKKKGE-VE 126
+ AE ++ + +K EAE+YQ +E+ + ++ + L+KL+H E I E+ + K + ++
Sbjct: 202 INAELRQYQEQKTEAERYQSQKEKRDSAQLVYLLWKLFHLEKSISSNMAEVTRLKADSIQ 261
Query: 127 KIERRKEKAENILREKKKEQGALNRELAKVDQEIREMDVEINKKRPSLIKSKERVSHIQK 186
IERR E + I + K+++G++ R L D+++R+ + I KRP LI E+ +
Sbjct: 262 LIERRDENTKEI-EKLKEKEGSIRRNLLAFDRKVRKQEKLIASKRPELISIAEKALESKS 320
Query: 187 KLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEY 226
L ++ E+ + + LE QL + + E+
Sbjct: 321 NLRKIQRKAAEIEKDYSDQASTLQVLENQLTSLSAAEKEF 360
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 8 IEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
+EV+NFKSY+G IGP + FT++IGPNG+G
Sbjct: 7 LEVENFKSYRGHQIIGPFEDFTSIIGPNGAG 37
>sp|P32908|SMC1_YEAST Structural maintenance of chromosomes protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC1 PE=1 SV=1
Length = 1225
Score = 196 bits (498), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 225/926 (24%), Positives = 422/926 (45%), Gaps = 177/926 (19%)
Query: 259 RVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEYE---RQSIPGRD- 314
R+SHI+K++ S +K L Q + + + ETQL V + K +E +QS D
Sbjct: 325 RISHIEKRIESLQKDL----QRQKTY---VERFETQLKVVTRSKEAFEEEIKQSARNYDK 377
Query: 315 INLESAQMTEYTNLKAEATKRAGKILQQ-LDTINREQKGDQDKLDNELRQQVQTQNEIKK 373
L + Y L + G IL++ + +N +++ Q++L ++ + +I K
Sbjct: 378 FKLNENDLKTYNCLHEKYLTEGGSILEEKIAVLNNDKREIQEEL-----ERFNKRADISK 432
Query: 374 KRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEE-------LNSDVGSSKNRVQELQKE 426
+R EE +KL+ + SL + L E L SD+ S+ N+ +L +
Sbjct: 433 RRI-TEELSITGEKLDTQLNDLRVSLNEKNALHTERLHELKKLQSDIESANNQEYDLNFK 491
Query: 427 LEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAYSGVYDRMINMCHPVHKRYNVAITKV 486
L + + ++ D ++ E + +K +E + K+ + GV + ++CHP ++Y +A++ +
Sbjct: 492 LRETLVKIDDLSANQRETMKERKLRENIAMLKRFFPGVKGLVHDLCHPKKEKYGLAVSTI 551
Query: 487 LGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTK-PLKERLRNIRDPKNVKL 545
LGK ++++V++ A+ CI +LK + +F+P+D ++T+ P ++ D ++ L
Sbjct: 552 LGKNFDSVIVENLTVAQECIAFLKKQRAGTASFIPLDTIETELP----TLSLPDSQDYIL 607
Query: 546 LYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQH--RYDAVALDGTFYQKS 603
+ + Y+PE ++ + + ++++C T + +A D++ + R V ++G K+
Sbjct: 608 SINAIDYEPE-YEKAMQYVCGDSIICNT----LNIAKDLKWKKGIRGKLVTIEGALIHKA 662
Query: 604 GIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREAMKKSRKESELNTVQSTIKGLE 663
G+M+GG A RWD +E +L + K+KL ++ E R N++++ + +E
Sbjct: 663 GLMTGGISGDAN--NRWDKEEYQSLMSLKDKLLIQIDELSNGQRS----NSIRA--REVE 714
Query: 664 IRLNYSRQDLQNTKSQIAKLEAEID----ALNARADATE----PKIKAIEASMTARGDTI 715
++ D+ N ++Q+ + + +D + D E PKI ++ + +T
Sbjct: 715 NSVSLLNSDIANLRTQVTQQKRSLDENRLEIKYHNDLIEKEIQPKITELKKKLDDLENTK 774
Query: 716 SRKKEEMNSVEDIVFRDFCKSIGVSTIRQYE--EAELRSQQ--ERQKICQDKDTKKNVA- 770
+E ++++ +F++F IG TI++YE EL QQ E Q++ + T +N
Sbjct: 775 DNLVKEKEALQNNIFKEFTSKIGF-TIKEYENHSGELMRQQSKELQQLQKQILTVENKLQ 833
Query: 771 -----------RWERAVSDDEEELARAQGAEEK-LAGEMRAEA---------DKLENMRA 809
R+E+A D E + EE+ A EM+ + + L+ ++
Sbjct: 834 FETDRLSTTQRRYEKAQKDLENAQVEMKSLEEQEYAIEMKIGSIESKLEEHKNHLDELQK 893
Query: 810 TRLTKKQAVDA-------MDEEIGKARREVGSIAKDIQAAQKSCVNLESKLEMKKSERHD 862
+TK+ +++ M+ + +RE I +DI+ K ++ ER
Sbjct: 894 KFVTKQSELNSSEDILEDMNSNLQVLKRERDGIKEDIE-----------KFDL---ERVT 939
Query: 863 ILMNCKMNDIVLPM--------LRVQKYD------------------------------R 884
L NCK+++I +P+ L + D +
Sbjct: 940 ALKNCKISNINIPISSETTIDDLPISSTDNEAITISNSIDINYKGLPKKYKENNTDSARK 999
Query: 885 KLAKSIQEMTSRLQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKK 944
+L + I E+ L +Q PN RA+E+ + A+ N E E + KK F +IKK
Sbjct: 1000 ELEQKIHEVEEILNELQ-PNARALERYDEAEGRFEVINNETEQLKAEEKKILNQFLKIKK 1058
Query: 945 ERYDKFTRCFEHVSNEIDG---------------AGSESVLP-----RPF-LGPENPEEP 983
+R + F + F++VS+ +D AG + L PF G + P
Sbjct: 1059 KRKELFEKTFDYVSDHLDAIYRELTKNPNSNVELAGGNASLTIEDEDEPFNAGIKYHATP 1118
Query: 984 LTYR----------------VSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTK 1027
R ++ + Y P+PFFVLDE+DAALD TN+ ++A+YI
Sbjct: 1119 PLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRH 1178
Query: 1028 TQDSLQTIVISLKEEFFSHADSLVGI 1053
LQ IVISLK F +D+LVG+
Sbjct: 1179 RNPDLQFIVISLKNTMFEKSDALVGV 1204
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 8 IEVDNFKSYKGKFSIG-PLKKFTAVIGPNGSG 38
+E+ NFKSY+G +G FT++IGPNGSG
Sbjct: 7 LELSNFKSYRGVTKVGFGESNFTSIIGPNGSG 38
>sp|P50532|SMC4_XENLA Structural maintenance of chromosomes protein 4 OS=Xenopus laevis
GN=smc4 PE=1 SV=1
Length = 1290
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 182/768 (23%), Positives = 346/768 (45%), Gaps = 106/768 (13%)
Query: 378 MEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDA 437
++E + I +LE + ++E LK +K E L S+ G+ KN+V+EL++++E+ L
Sbjct: 528 LKERRAAIKELETKLPKDEGDLKKREKELESLVSEEGNIKNQVRELRQKVEEARSSLSAN 587
Query: 438 KTDKHEDTRRKKKQELVENFKKA-YSGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVV 496
++ R K L++ K G++ R+ ++ + ++Y+VAI+ G ++ IVV
Sbjct: 588 RS------RGKVLDALIQQKKSGKIPGIFGRLGDLG-AIDEKYDVAISSSCGA-LDHIVV 639
Query: 497 DSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPED 556
D+ TA+ C+ +LK + TF+ +D + K ++ L I+ P+N+ L+D++K + E
Sbjct: 640 DTIDTAQECVNFLKKQNVGVATFIGLDKM--KVWEKGLNKIQTPENIPRLFDMVKVKDEQ 697
Query: 557 IKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARK 616
IK FA + +V + A +VA+ + R+ V L G ++SG M+GG + +
Sbjct: 698 IKPAFYFALRDTIVANNLDQATRVAF--QKDKRWRVVTLQGQIIEQSGTMTGGGGKVMKG 755
Query: 617 AKRWDDKEM-----GNLKAQKEKLSEELREAM----KKSRKESELNTVQSTIKGLEIRLN 667
R M L+ + KL + A +K+ E E+ ++ + ++
Sbjct: 756 --RMGSSVMVEISDDQLQKMENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFE 813
Query: 668 YSRQDLQNTKSQIAKLEAEIDALNARADATEP---KIKAIEASMTARGDTISRKKEEMNS 724
LQ+ Q L+A++ L A P + K +E ++ + E+
Sbjct: 814 KYTASLQSLSEQEVHLKAQVKELEVNVAAAAPDKNQQKQMEKNLETLKKEYEKVAEKAGK 873
Query: 725 VEDIVFRDFCKSIGVSTIRQYEEAELRSQQER-QKI------CQDKDTKKNVA--RWERA 775
VE V R + ++ + L++QQ++ K+ C TK V+ +R
Sbjct: 874 VEAEVKRLHKLIVDINNHK------LKAQQDKLDKVTKEIDECASAITKAQVSIKTADRN 927
Query: 776 VSDDEEELARAQG---AEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARR-- 830
+ EE +AR + A +K E+ + KLE T + + + + E+ + R
Sbjct: 928 LKKSEEAVARTEKEIVANDKSIEELTEDLKKLEEKATTVMNECKEAECSLPEVQEQHRSL 987
Query: 831 --EVGSIAKDIQAAQKSCVNL--------------ESKLEMKKSERHDILMNCKMNDI-- 872
E+ +I + A QK +N+ +SK++ + E I ++ K+ DI
Sbjct: 988 LQEIKAIQEKEHALQKEALNIRLNIEQIDSHIAEHQSKIKYWQKEITKISLH-KIEDIPE 1046
Query: 873 -VLPMLRVQKYDRKLAKSIQEMTSRLQTIQA------PNLRAMEKLEHAKENLMKTNEEF 925
VLP L ++ + K ++ +++ ++A PNL A+ + + +E ++ E
Sbjct: 1047 EVLPGLAQEELEA--IKDPDQIINQIALLEAKSHEMKPNLGAIAEYKKKEELYLQRVAEL 1104
Query: 926 ENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID--------GAGSE---------- 967
+ + ++ ++K+R ++F F ++N++ G +E
Sbjct: 1105 DEITNERDSFRRAYEDLRKQRLNEFMAGFNIITNKLKENYQMLTLGGDAELELVDSLDPF 1164
Query: 968 ------SVLP-----RPFLGPENPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTN 1016
SV P + E+ L+ ++ H Y P P + +DEIDAALD N
Sbjct: 1165 SEGIMFSVRPPKKSWKKIFNLSGGEKTLS-SLALVFALHHYKPTPLYFMDEIDAALDFKN 1223
Query: 1017 IGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICPGSVTISSIC 1064
+ VA YI +T+++ Q I+ISL+ F AD L+GI T S+
Sbjct: 1224 VSIVAFYIYEQTKNA-QFIIISLRNNMFEIADRLIGIYKTHNTTKSVA 1270
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPL-KKFTAVIGPNGSG 38
++ +I NFKSY G+ +GP K+F+ +IGPNGSG
Sbjct: 77 MITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSG 112
>sp|Q9ERA5|SMC4_MICAR Structural maintenance of chromosomes protein 4 (Fragment)
OS=Microtus arvalis GN=SMC4 PE=2 SV=1
Length = 1243
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 180/829 (21%), Positives = 376/829 (45%), Gaps = 145/829 (17%)
Query: 343 LDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRID--------------KL 388
+D++ +E +G Q + +++ ++ + + + R +ME AQ +D K
Sbjct: 419 MDSLKQETQGLQKEKEDQEKELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKA 478
Query: 389 EDHIRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEE--------------L 434
++ + +LK+ K E+N+ + ++ ++E +KEL+++ +E +
Sbjct: 479 KETLITASETLKERKAAIGEINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKV 538
Query: 435 GDAKTDKHEDTRRKKKQELVENFKKA--YSGVYDRMINMCHPVHKRYNVAITKVLGKYME 492
+AK+ + R K + + KK+ G+Y R+ ++ + ++Y++AI+ ++
Sbjct: 539 EEAKSSLAMNRSRGKVLDAIIQEKKSGRIPGIYGRLGDLG-AIDEKYDIAISSCC-HALD 596
Query: 493 AIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKY 552
IVVDS TA+ C+ +LK H + TF+ +D + +++ I+ P+N L+D++K
Sbjct: 597 YIVVDSIDTAQECVNFLKRHNIGVATFIGLDKMTV--WAKKMAKIQTPENTPRLFDLVKA 654
Query: 553 QPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLD 612
+ E+I++ FA + LV + + A +VAY + R+ V L G ++SG M+GG
Sbjct: 655 KNEEIRQAFYFALRDTLVADNLDQATRVAY--QKDRRWRVVTLQGQIIEQSGTMTGGGSK 712
Query: 613 LARK------AKRWDDKEMGNLKAQKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRL 666
+ R ++E+ +++Q +K S++ R ++ + E ++L
Sbjct: 713 VMRGRMGSSVIVEISEEEVNKMESQLQKHSKQARRIQEQKVQHEER----------VVKL 762
Query: 667 NYSRQDLQNTKSQIAKLEAEIDALNARADATEPKIKAIEASMTARG----------DTIS 716
+S ++++NT + K A I L+ + + +IK +EA++ + +S
Sbjct: 763 RHSEREMRNT---LEKFAASIQGLSDQEEYLTVQIKELEANVLTTAPDKKKQKLLEENVS 819
Query: 717 RKKEEMNSVEDIVFRDFCKSIGV-STIRQYEEAELRSQQERQKI-------CQDKDTK-- 766
K+E ++V + + + + TI + +L++QQ + + C TK
Sbjct: 820 AFKKEYDAVAEKAGKVEAEVKRLHDTIIEINNRKLKAQQNKLDMINKQLDECASAITKAQ 879
Query: 767 -------KNVARWERAVSDDEEELARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVD 819
+N+ + + +V E+E+ + L E++A DK E + + K A +
Sbjct: 880 VAIKTADRNLIKAQDSVVRTEKEIKDTEKETNDLKAELKAIEDKAEEV----IKKTNAAE 935
Query: 820 AMDEEIGKARR----EVGSIAKDIQAAQKSCVNLESKLEMKKSERHDILMNCKM------ 869
EI K R E+ I ++ A QK +++ KL++++ + H N K+
Sbjct: 936 ESLPEIQKEHRNLLQELKVIQENEHALQKDALSI--KLKLEQIDGHIAEHNSKIKYWQKE 993
Query: 870 ----------NDIVLPMLRVQKYDRKLAKSIQEMTSRLQTIQA------PNLRAMEKLEH 913
++ V + + D + K+ +T+++ ++A PNL A+ + +
Sbjct: 994 ISKIKLHPIEDNPVETVSVLSPEDLEAIKNPDSITNQIAILEAQCHEMKPNLGAIAEYKK 1053
Query: 914 AKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID--------GAG 965
+E ++ E + + ++ ++K+R ++F F ++N++ G
Sbjct: 1054 KEELYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTLGGD 1113
Query: 966 SE----------------SVLP-----RPFLGPENPEEPLTYRVSTTIVSHRYHPAPFFV 1004
+E SV P + E+ L+ ++ H Y P P +
Sbjct: 1114 AELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLS-SLALVFALHHYKPTPLYF 1172
Query: 1005 LDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
+DEIDAALD N+ VA YI +T+++ Q I+ISL+ F +D L+GI
Sbjct: 1173 MDEIDAALDFKNVSIVAFYIYEQTKNA-QFIIISLRNNMFEISDRLIGI 1220
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPL-KKFTAVIGPNGSG 38
++ +I NFKS G+ +GP K+F+ +IGPNGSG
Sbjct: 38 MITHIVNQNFKSCAGEKILGPFHKRFSCIIGPNGSG 73
>sp|Q54LV0|SMC4_DICDI Structural maintenance of chromosomes protein 4 OS=Dictyostelium
discoideum GN=smc4 PE=3 SV=1
Length = 1415
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 170/720 (23%), Positives = 320/720 (44%), Gaps = 141/720 (19%)
Query: 462 SGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLP 521
SG++ R+ ++ + ++Y+VAI+ M+ I+V++ A C++ L+ L TF+
Sbjct: 695 SGIHGRLGDLG-AIDQKYDVAISTAAFSQMDNIIVETTAAAEACVELLRKENLGRATFMI 753
Query: 522 IDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLF-ATNNALVCETPEDAMKV 580
++ L+ + ++ L ++ P N L+D++K + E F A + LV +T ++A K+
Sbjct: 754 LENLEYQ--RQNLGPVQTPNNTPRLFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKI 811
Query: 581 AYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSE--- 637
AY + R+ V LDG+ SG MSGG L + + K G+ K K+KL E
Sbjct: 812 AYGAK---RHRVVTLDGSLIDTSGAMSGGG--LKPRVGAMNSKLKGDPKEDKKKLIELQD 866
Query: 638 ---ELREAMKKSRK-----ESELNTVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDA 689
+L +++ R E+++ Q+ LE+ L D++ ++ +L I
Sbjct: 867 NLSQLDSDLRQCRDELVEIENQIQQAQNRRSELELELPKMDMDIKAAITKCEELTKVIPQ 926
Query: 690 LNARAD-ATEPK--IKAIEASMTARGDTISRKKEEMNSVEDIV--FRDFCKSIGVSTIRQ 744
L +A +TE K I +I+ S+ ++ + +E++N +E V ++ ++G ++
Sbjct: 927 LKNKAKLSTEKKEQIDSIKESLIVDQKSLDKVQEKVNKLESEVQEIQNSILNVGGPQLK- 985
Query: 745 YEEAELRSQQERQKICQDKDTKKNVA------RWERAV--------SDDEEELARAQGAE 790
++ ++ S Q R Q TK NV E+++ DE E A A+ E
Sbjct: 986 MQKNKVESLQSRIDSNQTNTTKANVQIKSLAKSMEKSIKILNENTKEKDENEAALAEILE 1045
Query: 791 EKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQK------ 844
+ + E EN++AT +A++A+ E++ + E I K+ + A+K
Sbjct: 1046 KYKSLEK-------ENLKAT-----EAMEAVSEQLREKEEETKEIRKEHEKAKKVIEKIK 1093
Query: 845 -SCVNLESKLEMKKS---ERHDILMNC------------------------KMNDIVLPM 876
S LE+++E K+ E+ + +C +++ I+ P
Sbjct: 1094 VSNSKLETQIEEFKTLINEKQAEIADCLSKFANQAKKAKIYKDYVDESLINQVSAILTPE 1153
Query: 877 LRVQKY-----DRKLAKSIQEMTSRLQTIQAP---NLRAMEKLEHAKENLMKTNEEFENA 928
+++Y + L I E+T+++Q I N+ ++ + ++ EF+
Sbjct: 1154 -EIEQYMEATEQQNLIAKIHELTTQIQKISKENNVNIEVVKDFQKKEQEYHSRKAEFDEI 1212
Query: 929 RKRAKKAKANFDRIKKERYDKFTRCFEHVSNE---------IDGAGSESVLPR--PFLGP 977
K ++ ++K R D+F F ++ + + G ++ R PF
Sbjct: 1213 EKERDNLSKRYESLRKNRLDEFMAGFTIITMKLKEIYQMITLGGDAELEIIDREDPF--- 1269
Query: 978 ENPEEPLTYRV-----------------------STTIVSHRYHPAPFFVLDEIDAALDN 1014
+E +++ V + H Y P +V+DEIDAALD
Sbjct: 1270 ---QEGISFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPNALYVMDEIDAALDF 1326
Query: 1015 TNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI-----CPGSVTISSICFGHYS 1069
N+ +A+YI +T+++ Q I+ISL+ F AD LVGI C SVTI+ F S
Sbjct: 1327 KNVSIIANYIKERTKNA-QFIIISLRNYMFELADRLVGIYKTDNCTKSVTINPNSFTSLS 1385
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 10 VDNFKSYKGKFSIGPLKK-FTAVIGPNGSG 38
++NFKSY G +GP K F++V+GPNGSG
Sbjct: 165 MENFKSYAGAQEVGPFHKCFSSVVGPNGSG 194
>sp|Q8CG47|SMC4_MOUSE Structural maintenance of chromosomes protein 4 OS=Mus musculus
GN=Smc4 PE=1 SV=1
Length = 1286
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 177/823 (21%), Positives = 372/823 (45%), Gaps = 133/823 (16%)
Query: 343 LDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRID--------------KL 388
+D++ +E +G Q + + + ++ + + + R +ME AQ +D K
Sbjct: 462 MDSLKQETQGLQKEKEIQEKELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKA 521
Query: 389 EDHIRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEE--------------L 434
++ + +LK+ K +++N+ + ++ ++E +KEL+++ +E +
Sbjct: 522 KEALITASETLKERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKV 581
Query: 435 GDAKTDKHEDTRRKKKQELVENFKKA--YSGVYDRMINMCHPVHKRYNVAITKVLGKYME 492
+AK+ + R K + + KK+ G+Y R+ ++ + ++Y++AI+ ++
Sbjct: 582 EEAKSSLAMNRSRGKVLDAIIQEKKSGRIPGIYGRLGDLG-AIDEKYDIAISSCC-HALD 639
Query: 493 AIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKY 552
IVVDS TA+ C+ +LK H + TF+ +D + +++ I+ P+N L+D++K
Sbjct: 640 YIVVDSIDTAQECVNFLKKHNIGIATFIGLDKMTV--WAKKMSKIQTPENTPRLFDLVKV 697
Query: 553 QPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLD 612
+ E+I++ FA + LV + A +VAY + R+ V L G ++SG MSGG
Sbjct: 698 KNEEIRQAFYFALRDTLVANNLDQATRVAY--QRDRRWRVVTLQGQIIEQSGTMSGGGSK 755
Query: 613 LARK---AKRWDDKEMGNLKAQKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYS 669
+ R + D+ + + + +L ++AM+ +E ++ ++ +K L +S
Sbjct: 756 VMRGRMGSSVIDEISVEEVNKMESQLERHSKQAMQ--IQEQKVQHEEAVVK-----LRHS 808
Query: 670 RQDLQNTKSQIAKLEAEIDALNARADATEPKIKAIEAS-MTARGDTISRKKEEMNSVEDI 728
+D++NT + K A I L+ + + +IK +EA+ +T D RK++++
Sbjct: 809 ERDMRNT---LEKFAASIQGLSEQEEYLCVQIKELEANVLTTAPD---RKQQKLLEENVS 862
Query: 729 VFRDFCKSIG-------------VSTIRQYEEAELRSQQERQKI-------CQDKDTKKN 768
VF+ ++ +TI +L++QQ + C TK
Sbjct: 863 VFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKLKAQQNKLDTINKQLDECASAITKAQ 922
Query: 769 VA---------RWERAVSDDEEELARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVD 819
VA + + +V E+E+ + L E++ DK E + T + ++
Sbjct: 923 VAIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLP 982
Query: 820 AMDEEIGKARREVGSIAKDIQAAQKSCVNLESKLE--------------MKKSERHDILM 865
+ +E +E+ I ++ A QK ++++ KLE + E I +
Sbjct: 983 EIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHISEHNSKIKYWQKEISKIKL 1042
Query: 866 NCKMNDIVLPMLRVQKYDRKLAKSIQEMTSRLQTIQA------PNLRAMEKLEHAKENLM 919
+ ++ V + + + + + K+ + +T+ + ++A PNL A+ + + ++ +
Sbjct: 1043 HPVEDNPVETVAVLSQEELEAIKNPESITNEIALLEAQCREMKPNLGAIAEYKKKEDLYL 1102
Query: 920 KTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID--------GAGSE---- 967
+ E + + ++ ++K+R ++F F ++N++ G +E
Sbjct: 1103 QRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKENYQMLTLGGDAELELV 1162
Query: 968 ------------SVLP-----RPFLGPENPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDA 1010
SV P + E+ L+ ++ H Y P P + +DEIDA
Sbjct: 1163 DSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLS-SLALVFALHHYKPTPLYFMDEIDA 1221
Query: 1011 ALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
ALD N+ VA YI +T+++ Q I+ISL+ F +D L+GI
Sbjct: 1222 ALDFKNVSIVAFYIYEQTKNA-QFIIISLRNNMFEISDRLIGI 1263
>sp|Q8TZY2|SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=smc PE=1 SV=2
Length = 1177
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 169/732 (23%), Positives = 315/732 (43%), Gaps = 150/732 (20%)
Query: 412 DVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKA-YSGVYDRMIN 470
++ + N ++++ KELE EL A E R + E K++ G+Y +
Sbjct: 474 EIEAKSNELEKVSKELESSERELIAA-----EAQREVRGNRAAEELKRSGIGGIYGTLAE 528
Query: 471 MCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPL 530
+ + Y +AI LG + +VV+ E A I+YLK+H+L TFLP++ ++ K +
Sbjct: 529 LIKVKDEAYALAIEVALGNRADNVVVEDELVAEKAIKYLKEHKLGRLTFLPLNKIKPKHV 588
Query: 531 KERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQ-HR 589
++ P DV++Y + I+ V FA + ++ + E+A P +
Sbjct: 589 DS---SVGLPA-----VDVIEYD-QKIENAVKFALGDTVIVNSMEEA-------RPHIGK 632
Query: 590 YDAVALDGTFYQKSGIMSGGSL---DLA-------------RKAKRWDDKEMGNLKAQKE 633
V ++G Y++SG ++GG LA R+ K + E+ +LK +
Sbjct: 633 VRMVTIEGELYERSGAITGGHFRARGLAVDTTKLREKVESLRRRKEALEGELNSLKIELR 692
Query: 634 KL---SEELREAMKKSRKESEL------------NTVQSTIKGLEIRLNYSRQDLQNTKS 678
L S ELR + +KE EL N V+ I+ E ++ Q ++N KS
Sbjct: 693 SLENASFELRIKLSDEKKELELASKDLNRLLEEENAVKEEIEESERKIQEIEQKIENEKS 752
Query: 679 QIAKLEAEID-----------AL-NARADATEPKIKAIEASMTARGDTISRKKEEMNSVE 726
++AKL I AL N A KI+ I+ +++ + +SR + + S+E
Sbjct: 753 ELAKLRGRIQRLERKKEKLKKALENPEARELMEKIRIIDGEISSLKEELSRIESRIESLE 812
Query: 727 DIVFRDFCKSIGVSTIRQYEEAELRSQQERQKICQDKDTKKNVARWERAVSDDEEELARA 786
+ + +A L + E + + K N++ E+A+ +EL +
Sbjct: 813 SRLNEELLPR----------KASLEEEIE-GLVNKINALKNNISENEKALELLNKELEKL 861
Query: 787 QGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSC 846
+ EE + GE+R T ++ ++E+I K R + + + +Q
Sbjct: 862 KSIEENIKGEIR--------------TLREKRKKLEEDISKLREKKEVLQRKLQ------ 901
Query: 847 VNLESKLEMKKSERHDILMNCKMNDIVLPMLRVQKYDRKLAKSIQEM------------- 893
E ++E + D +N ++ + ++ YD+ L KSI+E+
Sbjct: 902 ---ELEIEANTLKVRDAQLNAQLEE---KKYQLTHYDKNLIKSIKEIPLDLEKVKKEIEK 955
Query: 894 -TSRLQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTR 952
+++++ N++A+E E + ++ + E + + I+KE+ + F R
Sbjct: 956 MEEEIRSLEPVNMKAIEDFEIVERRYLELKSKREKLEAEKESIIEFINEIEKEKKNVFMR 1015
Query: 953 CFEHVS---NEIDGAGSESVLPRPFLGPENPEEPLT------------------------ 985
FE +S +EI S R L ENPE+P +
Sbjct: 1016 TFEAISRNFSEIFAKLSPGGSARLIL--ENPEDPFSGGLEIEAKPAGKDVKRIEAMSGGE 1073
Query: 986 ---YRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEE 1042
++ ++ PAPF++ DEIDA LD+ N+ +VA I +++S Q IVI+L++
Sbjct: 1074 KALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKES-QFIVITLRDV 1132
Query: 1043 FFSHADSLVGIC 1054
++AD ++G+
Sbjct: 1133 MMANADKIIGVS 1144
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 3 PILQYIEVDNFKSYKGKFSIGPLKK-FTAVIGPNGSG 38
P ++ +E+ FKSY K + P K FTA++G NGSG
Sbjct: 2 PYIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSG 38
>sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes protein 4 OS=Homo sapiens
GN=SMC4 PE=1 SV=2
Length = 1288
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 153/673 (22%), Positives = 300/673 (44%), Gaps = 103/673 (15%)
Query: 463 GVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPI 522
G+Y R+ ++ + ++Y+VAI+ ++ IVVDS A+ C+ +LK + TF+ +
Sbjct: 614 GIYGRLGDLG-AIDEKYDVAISSCC-HALDYIVVDSIDIAQECVNFLKRQNIGVATFIGL 671
Query: 523 DYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAY 582
D + +++ I+ P+N L+D++K + E I++ FA + LV + + A +VAY
Sbjct: 672 DKMAV--WAKKMTEIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAY 729
Query: 583 DIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGN---LKAQKEKLSEEL 639
+ R+ V L G ++SG M+GG + + MG+ ++ +E++++
Sbjct: 730 --QKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKG-------RMGSSLVIEISEEEVNKME 780
Query: 640 REAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKSQIAK-----------LEAEID 688
+ S+K ++ + ++ ++L +S ++++NT + L ++
Sbjct: 781 SQLQNDSKKAMQIQEQKVQLEERVVKLRHSEREMRNTLEKFTASIQRLIEQEEYLNVQVK 840
Query: 689 ALNARADATEP---KIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQY 745
L A AT P K K +E +++A E+ VE V R +TI +
Sbjct: 841 ELEANVLATAPDKKKQKLLEENVSAFKTEYDAVAEKAGKVEAEVKRLH------NTIVEI 894
Query: 746 EEAELRSQQER-QKICQDKD-TKKNVARWERAVSDDEEELARAQGA----------EEKL 793
+L++QQ++ KI + D + + + A+ + L +AQ + EK
Sbjct: 895 NNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTEKE 954
Query: 794 AGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARR----EVGSIAKDIQAAQKSCVNL 849
++ AE LE+ A + A + EI K R E+ I ++ A QK +++
Sbjct: 955 VDDLTAELKSLEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSI 1014
Query: 850 ESKLEM----------KKSERHDILMNCKMNDI----VLPMLRVQKYDRKLAKSIQEMTS 895
+ KLE K H + ++ I + + + D + K+ +T+
Sbjct: 1015 KLKLEQIDGHIAEHNSKIKYWHKEISKISLHPIEDNPIEEISVLSPEDLEAIKNPDSITN 1074
Query: 896 RLQTIQA------PNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDK 949
++ ++A PNL A+ + + +E ++ E + + ++ ++K+R ++
Sbjct: 1075 QIALLEARCHEMKPNLGAIAEYKKKEELYLQRVAELDKITYERDSFRQAYEDLRKQRLNE 1134
Query: 950 FTRCFEHVSNEID--------GAGSE----------------SVLP-----RPFLGPENP 980
F F ++N++ G +E SV P +
Sbjct: 1135 FMAGFYIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG 1194
Query: 981 EEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLK 1040
E+ L+ ++ H Y P P + +DEIDAALD N+ VA YI +T+++ Q I+ISL+
Sbjct: 1195 EKTLS-SLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNA-QFIIISLR 1252
Query: 1041 EEFFSHADSLVGI 1053
F +D L+GI
Sbjct: 1253 NNMFEISDRLIGI 1265
>sp|Q24U48|SMC_DESHY Chromosome partition protein Smc OS=Desulfitobacterium hafniense
(strain Y51) GN=smc PE=3 SV=1
Length = 1198
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 161/675 (23%), Positives = 288/675 (42%), Gaps = 118/675 (17%)
Query: 475 VHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERL 534
V +RY VA+ LG ++ IV ++E+ A+ + YLK H L TFLP+D +Q
Sbjct: 543 VEERYEVAVEVALGAGIQNIVTETERGAKEAVHYLKSHNLGRATFLPLDVIQGGKATVAK 602
Query: 535 RNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVA 594
+DP + + D++ + E ++ L+ E A +VA +R V
Sbjct: 603 EAAQDPGFIGVAVDLITF-AEKYRKAFESQLGRTLIVTDMEAATRVAR--ASGYRARIVT 659
Query: 595 LDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREAMKKSR---KESE 651
L+G G ++GGSL RK NL + ++ +ELR+ + R KE E
Sbjct: 660 LEGDQVHPGGSLTGGSLQ--RKGS--------NLLGRSREI-QELRQECDERRTQQKEME 708
Query: 652 L--NTVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDALNARADATEPKIKAIEASMT 709
L + + I+ E L + + Q KS +A L + L A+A ++ AI A M
Sbjct: 709 LKAGALGTQIQKGEENLKHLMGEEQELKSALAVLRTQELNLRAQAQRIHEEVTAIAARMA 768
Query: 710 ARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQYEEAELRSQQERQKICQDKD----- 764
I ++++E+ S + + + K +I++ +EA R +++ ++ ++ +
Sbjct: 769 G----IEQERDELQSHKALGAEEQSKL--TDSIQEAQEALARQEEKNRQASREMEQLQER 822
Query: 765 ---TKKNVARWERAVSDDEEELARAQ---GAEEKLAGEMRAEADKLENMRATRLTKKQAV 818
TK A+WE+ + E LA+ Q G + L R + LE +A RL +Q
Sbjct: 823 LTQTKVQAAKWEQELKQAVERLAQDQALLGENKHLLERKRKDLQDLEESKA-RLAFEQG- 880
Query: 819 DAMDEEIGKARRE------------VGSIAKDIQAAQKSCVNLESKLEMKKSERHDILMN 866
D E +RR + ++ K+ + K ++ ES + K+ E+ +
Sbjct: 881 ---DWE---SRRREAGEQQQQAQEVLIALRKEREVLSKELMDQESLAQKKRQEQQT--LE 932
Query: 867 CKMNDIVLPMLR------------VQKYD---------------RKLAKSIQEMTSRLQT 899
K++++ L R ++++D +L +QE+ R++
Sbjct: 933 QKLHNLELKTARWDAEWETGSRRLLEEFDLTWDEAQTYQSERNRAELGARVQEIKLRMEL 992
Query: 900 IQAPNLRAME---KLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDK------- 949
+ N A+E KL+ + L ++ E A + ++ A D+ ER+++
Sbjct: 993 LGPVNQAAIEEYPKLQERYDFLSVQKQDLEEANESLQQLIAELDKTMSERFEEGFIAVNE 1052
Query: 950 -FTRCFEHV-------------SNEIDGAGSESVLPRPFLGPE------NPEEPLTYRVS 989
F F+ + +N +D G E + P P+ E LT +
Sbjct: 1053 AFKVVFKELFNGGYAELRLVDPTNLLD-TGVEIIAQPPGKKPQLLSLLSGGERALTA-IG 1110
Query: 990 TTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADS 1049
+ P+PF VLDEI+A+LD+ N+ + A YI + DS Q +VIS ++ AD
Sbjct: 1111 LLFALLKVKPSPFCVLDEIEASLDDANVSRFAQYI-HRLSDSTQFLVISHRKGTMEAADV 1169
Query: 1050 LVGICPGSVTISSIC 1064
L GI +S +
Sbjct: 1170 LYGITMEESGVSKLL 1184
>sp|B8CW13|SMC_HALOH Chromosome partition protein Smc OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=smc PE=3 SV=1
Length = 1185
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 133/672 (19%), Positives = 283/672 (42%), Gaps = 110/672 (16%)
Query: 475 VHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERL 534
V K+Y +AI LG ++ I+V +K+AR C+ YLK+ + TFLP++ + + + +
Sbjct: 533 VDKKYELAIETALGGRLQNIIVKDDKSARECVDYLKETKGGQATFLPVNMVNGRKVNFKN 592
Query: 535 RNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVA 594
++ + + +K V+ + ++ + A+++A + + V
Sbjct: 593 NQVKKVDGFLGIASSFVDCEDYLKPVIEYLLGRTIISTDLKSAIEIAR--LRKRGFKIVT 650
Query: 595 LDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREAMK-----KSRKE 649
L+G G ++GGS + +K +++ +LK + KL L E K +++ +
Sbjct: 651 LEGDVINSGGAITGGSKNSNKKMLLSRSRKIEDLKKEVLKLQNSLGEDSKNLNQLENKLK 710
Query: 650 SELN---TVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDALN----------ARADA 696
LN +++ I+ LEI N +DL + + KL ++ ++ + DA
Sbjct: 711 EVLNKKEVIKNDIRDLEIEKNNYHKDLIRLEQEKTKLSERLEEIDEEFVDCHDRLGKNDA 770
Query: 697 TEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQYEEAELRSQQER 756
+ K+ E + A D S +K E+ + E ++ EE E R +
Sbjct: 771 AKQKL---EDKLKALNDDFSLEKNEIENKE----------------KRVEELEARHENIN 811
Query: 757 QKICQDK------DTKKNVARWERAVSDDEEELARAQGAEE------KLAGEMRAEADKL 804
+I + K + K+ R E S+ +E + A+ EE K+ E++ +K
Sbjct: 812 DEITRLKINLAQLNEKRESLRKEEEKSN-KELIELAEKNEEFKERYNKILSEIKGINNKE 870
Query: 805 ENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSCVNLESKLEMKKSERHDIL 864
+ ++ ++ + ++ +EV + I Q+ +L+++L+ KK E+H I
Sbjct: 871 GQLNELKVKLSGEIEKLKNDLNLTEKEVEEKQQRIDMLQREVSDLQTRLDKKKDEKHQIE 930
Query: 865 M--------------------NCKMNDIVLPMLRVQKYDRKLAKSIQEMTSRLQTIQAPN 904
+ + K D +++ Y R + ++E+ + ++ + N
Sbjct: 931 LKITRLENRNERIVEILENDYDVKPEDGFDDRIKITNYSRA-GQKVKELKNAIKKLGTVN 989
Query: 905 LRAMEK----------LEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCF 954
A+E+ L++ ++L+K E K ++ + + E + K F
Sbjct: 990 QGAIEEYNDLVDRLDYLQNQHDDLLKAKESI---TKVIQEIEETMSSLFHEAFLKVNGEF 1046
Query: 955 EHVSNEIDGAGSESVL---PRPFL--GPENPEEP-----------------LTYRVSTTI 992
+ E+ G S+ P L G E +P LT ++
Sbjct: 1047 NNTFKELFNGGQASLKLTEPENLLETGVEIVAQPPGKQLKKLSLMSGGERALTA-IALVF 1105
Query: 993 VSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVG 1052
+ +P+PF++LDEIDA LD+ N+ + A YI ++ + Q ++++ ++ + A+++ G
Sbjct: 1106 AFLKVNPSPFYILDEIDAPLDDANVTRFARYIKEYSRFA-QFLIVTHRKNMMAEAETIYG 1164
Query: 1053 ICPGSVTISSIC 1064
+ +S +
Sbjct: 1165 VTMEESGVSKLI 1176
>sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4 OS=Arabidopsis
thaliana GN=SMC4 PE=2 SV=1
Length = 1241
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 463 GVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPI 522
G+Y RM ++ + +Y+VAI+ ++ IVV++ +A+ C++ L+ L TF+ +
Sbjct: 556 GIYGRMGDLG-AIDAKYDVAISTACAG-LDYIVVETTSSAQACVELLRKGNLGFATFMIL 613
Query: 523 DYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAY 582
+ QT + + ++ P++V L+D+++ + E +K A N +V + + A ++AY
Sbjct: 614 EK-QTDHIHKLKEKVKTPEDVPRLFDLVRVKDERMKLAFYAALGNTVVAKDLDQATRIAY 672
Query: 583 DIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEKLSEELREA 642
+ R VALDG ++KSG MSGG + G EL
Sbjct: 673 GGNREFRR-VVALDGALFEKSGTMSGGGGKARGGRMGTSIRATGVSGEAVANAENEL--- 728
Query: 643 MKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDALNARADATEPKIK 702
S+ LN ++ + + + ++ + ++AK + EI++LN+ + E ++
Sbjct: 729 ---SKIVDMLNNIREKVGNAVRQYRAAENEVSGLEMELAKSQREIESLNSEHNYLEKQLA 785
Query: 703 AIEASMTARGDTISRKKE 720
++EA+ + D I R KE
Sbjct: 786 SLEAASQPKTDEIDRLKE 803
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 988 VSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHA 1047
++ H Y P P +V+DEIDAALD N+ V Y+ +T+D+ Q I+ISL+ F A
Sbjct: 1152 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA-QFIIISLRNNMFELA 1210
Query: 1048 DSLVGI-----CPGSVTISSICFG 1066
D LVGI C S+TI+ F
Sbjct: 1211 DRLVGIYKTDNCTKSITINPGSFA 1234
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 12 NFKSYKGKFSIGPL-KKFTAVIGPNGSG 38
NFKSY G+ +GP K F+AV+GPNGSG
Sbjct: 33 NFKSYAGEQRVGPFHKSFSAVVGPNGSG 60
>sp|Q59037|SMC_METJA Chromosome partition protein Smc OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=smc PE=3 SV=2
Length = 1169
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 33/268 (12%)
Query: 814 KKQAVDAMDEEIGKARREVGSIAKDIQAAQKSCVNLESKLEMKKSERHDILMNCKMNDIV 873
KK+ ++ E + + RRE+ +DI+ + ++K E K E L C+ D+
Sbjct: 893 KKEQLEKEIETLERERREILRKVRDIENRINELMVEKAKYESKLEEEERKLYLCEKVDVS 952
Query: 874 LPMLRVQKYD-RKLAKSIQEMTSRLQTIQAPNLRAMEKLEHAKE---NLMKTNEEFENAR 929
+ +K D +L I E+ + +++++ N+RA+E + E L++ +E+E
Sbjct: 953 KEL---EKKDIEELEIYIGELENEIKSLEPVNMRAIEDYNYVAERYKELIEKRKEYERDE 1009
Query: 930 KRAKKAKANFDRIKKERY----DKFTRCFEHVSNEIDGAGSESVL--PRPFLGP------ 977
K+ + + KKE + +K + FE V EI G G S+ PF G
Sbjct: 1010 KKYLQLMEELENKKKEVFMEVFNKVAKNFEEVYKEIGGIGKLSLENEKNPFEGGILIDAS 1069
Query: 978 ------------ENPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIV 1025
E+ LT ++ R +P+PF+VLDE+DAALD N+ +A I
Sbjct: 1070 PRGKKLLSLDAMSGGEKSLT-ALAFLFAIQRLNPSPFYVLDEVDAALDVKNVSLIADMIK 1128
Query: 1026 TKTQDSLQTIVISLKEEFFSHADSLVGI 1053
++DS Q IVIS +E+ S AD + G+
Sbjct: 1129 NASKDS-QFIVISHREQMVSKADVVYGV 1155
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 5 LQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ IE+ NFKS+K K S+ K FTA++GPNGSG
Sbjct: 4 LEKIELKNFKSFK-KLSLDIPKGFTAIVGPNGSG 36
>sp|Q90988|SMC2_CHICK Structural maintenance of chromosomes protein 2 OS=Gallus gallus
GN=SMC2 PE=2 SV=1
Length = 1189
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 150/671 (22%), Positives = 282/671 (42%), Gaps = 126/671 (18%)
Query: 482 AITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPE-TFLPIDYLQTKPLKERL----RN 536
A+ V G + IVVD+E T + + L+ QL T +P+ + + + +N
Sbjct: 540 ALEAVAGGKLYNIVVDTEATGK---KILEKGQLKHRYTIIPLSKISANSIGHEIISLAKN 596
Query: 537 IRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALD 596
+ + V + ++ Y E +++ + + LVC + ++A KV +D + V L
Sbjct: 597 LIGHREVHIAISLIDYNSE-LQKAMEYVFGTTLVCSSMDNAKKVTFDKRIMRK--TVTLQ 653
Query: 597 GTFYQKSGIMSGGS----------LDLARKAK----------RWDDKEMGNLKAQKEKLS 636
G + G +SGG+ L R A+ +KE+ NLK EK
Sbjct: 654 GDIFDPQGTLSGGASSHVTPILSKLKTMRDAEDELKIKTSQLEATEKELANLKNMAEKY- 712
Query: 637 EELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQ--DLQNTKSQIAKLEAEIDALNARA 694
+ L++ + +E+EL +Q+ I+ + Y +Q DL K IA+ E +
Sbjct: 713 QHLKQQWEMKSEEAEL--LQTKIQ----QSAYHKQQEDLLALKKTIAECEETLKKTEESQ 766
Query: 695 DATEPKIKAIEASM----TARGDTISRKKEEMNS------------------VEDIVFRD 732
E + KA+E M RG I ++++NS VE +V
Sbjct: 767 RKAEEEYKALENKMKNAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLE- 825
Query: 733 FCKSIGVSTIRQYEEAELRSQQE--RQKICQDKD----TKKNVARWERAVSDDEEELARA 786
+ ++Q E+A + Q E +Q I K+ + + ++ + E EL+
Sbjct: 826 ------LEQLKQ-EQASYKQQSEAAQQAIASLKEQVSALEAEAVKTRESLKNAENELSSE 878
Query: 787 QGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSC 846
+G E+ +++A++ K+E R + +++A++ +I K ++E + + K
Sbjct: 879 KGLMEERTKDIKAKSAKIEKYREQNNELQLSINALEHDINKYQQETADASSTLDKLLKEY 938
Query: 847 VNLESKLEMKKSERHDILMNCKMNDIVLPMLRVQKYDRKLAKSIQEMTSRLQTIQAPNLR 906
+ S+ E+ + D + + N+ P QK + L K +L+ ++ N+R
Sbjct: 939 KWIASEKEL--FGQADTTYDFEANN---PKETGQKLQKLLTKK-----EKLE--KSLNMR 986
Query: 907 AMEKLEHAKE---NLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEIDG 963
AM L A+E +LMK EN + K A + + +++ +E V+ + G
Sbjct: 987 AMNLLSEAEERYNDLMKKKRMVENDKI---KILATIEELDRKKNKALHIAWEKVNKDF-G 1042
Query: 964 AGSESVLP--RPFLGP---ENPEEPLTYRVSTTIV-----------------------SH 995
+ +LP + L P +N + L +RV +
Sbjct: 1043 SIFSMLLPGAKAMLVPSKKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAIL 1102
Query: 996 RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSL--VGI 1053
+ PAP ++LDE+DAALD ++ + + + S Q +V+SLK+ F++A+ L
Sbjct: 1103 LFKPAPIYILDEVDAALDLSHTQNIGQMLHAHFKQS-QFLVVSLKDGMFNNANVLYRTKF 1161
Query: 1054 CPGSVTISSIC 1064
G T+S C
Sbjct: 1162 VDGISTVSRHC 1172
>sp|Q12267|SMC4_YEAST Structural maintenance of chromosomes protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC4 PE=1
SV=1
Length = 1418
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 132/556 (23%), Positives = 256/556 (46%), Gaps = 57/556 (10%)
Query: 174 LIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAE-------- 225
L++S +++ +K++S+ K L + + + K + +++ Q +++ R +
Sbjct: 400 LLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTL 459
Query: 226 -YERQSIPGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAH 284
ER+ + G ++LE ++K + K+++ + + ++ A+ L E+R H
Sbjct: 460 VLERRELEGTRVSLEERTKNLVSK----MEKAEKTLKSTKHSISEAENMLEELRGQQTEH 515
Query: 285 NKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAEATKRAGKILQQLD 344
+I DL TQL E ER + DI L T+ N+ AE R K L+ D
Sbjct: 516 ETEIKDL-TQLL-------EKERSILD--DIKLSLKDKTK--NISAEII-RHEKELEPWD 562
Query: 345 TINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEE--AQKRIDK--LEDHI---RQNEA 397
+E++ ++EL +TQ ++KK +EE K+ K L+D I ++
Sbjct: 563 LQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLN 622
Query: 398 SLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENF 457
SLKD + E+ + S+ +++E+QK L + +A++ + + K +
Sbjct: 623 SLKDERSQGEK---NFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRL 679
Query: 458 KKA--YSGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLD 515
+K+ +G + R+ ++ + ++VAI+ + ++ +VVD+ + A+ CI YL+ ++L
Sbjct: 680 QKSGRINGFHGRLGDLG-VIDDSFDVAISTACPR-LDDVVVDTVECAQHCIDYLRKNKLG 737
Query: 516 PETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPE 575
F+ +D L+ + L+ I P+NV L+D++K + + LV + +
Sbjct: 738 YARFILLDRLR----QFNLQPISTPENVPRLFDLVKPKNPKFSNAFYSVLRDTLVAQNLK 793
Query: 576 DAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRW----DDKEMGNLKAQ 631
A VAY + R+ V +DG SG MSGG +A+ + DK +
Sbjct: 794 QANNVAYG---KKRFRVVTVDGKLIDISGTMSGGGNHVAKGLMKLGTNQSDKVDDYTPEE 850
Query: 632 KEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDLQNTKSQIAKLEAEIDALN 691
+K+ EL E +E+ T+ +E L R + +SQI+K E E D+L
Sbjct: 851 VDKIERELSE------RENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLA 904
Query: 692 ARADATEPKIKAIEAS 707
+ E ++K E +
Sbjct: 905 SELTLAEQQVKEAEMA 920
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 31/159 (19%)
Query: 924 EFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEID--------GAGSE-------- 967
+ NA ++ + K +KK+R+D+F F +S + G +E
Sbjct: 1241 DLNNAVQKRDEVKEQLGILKKKRFDEFMAGFNIISMTLKEMYQMITMGGNAELELVDSLD 1300
Query: 968 --------SVLP-----RPFLGPENPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDN 1014
SV+P R E+ L+ ++ H+Y P P +V+DEIDAALD
Sbjct: 1301 PFSEGVTFSVMPPKKSWRNITNLSGGEKTLS-SLALVFALHKYKPTPLYVMDEIDAALDF 1359
Query: 1015 TNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
N+ VA+YI +T+++ Q IVISL+ F A LVG+
Sbjct: 1360 RNVSIVANYIKERTKNA-QFIVISLRNNMFELAQQLVGV 1397
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 10 VDNFKSYKGKFSIGPL-KKFTAVIGPNGSG 38
++NFKSY GK +GP F+AV+GPNGSG
Sbjct: 161 LENFKSYAGKQVVGPFHTSFSAVVGPNGSG 190
>sp|Q8CG48|SMC2_MOUSE Structural maintenance of chromosomes protein 2 OS=Mus musculus
GN=Smc2 PE=1 SV=2
Length = 1191
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 159/660 (24%), Positives = 280/660 (42%), Gaps = 130/660 (19%)
Query: 481 VAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPE-TFLPIDYLQTKPLK-ERLR--- 535
A+ V G+ + +VVD+E TA+ + L+ +L T +P++ + + + E LR
Sbjct: 539 TALEVVAGERLYNVVVDTEVTAK---KLLEKGELKRRYTIIPLNKISARCIAPETLRVAQ 595
Query: 536 NIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVAL 595
N+ P NV + ++ Y+PE +++ + F VC ++A KVA+D R V L
Sbjct: 596 NLVGPDNVHVALSLVDYKPE-LQKGMEFVFGTTFVCNNMDNAKKVAFDKRIMTR--TVTL 652
Query: 596 DGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLKAQKEK-LSEELREAMKKSRKESELNT 654
G + G +SGG+ A K Q+ K + +ELR KE+EL
Sbjct: 653 GGDVFDPHGTLSGGARSQAASILT---------KFQEVKDVQDELR------TKENELRA 697
Query: 655 VQSTIKGLEIRLNYSRQ------------DLQNTK---SQIAKLEAEIDALNARADATEP 699
++ + GL+ RQ DL TK S K + E+DAL + +E
Sbjct: 698 LEEELAGLKNVAEKYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEE 757
Query: 700 KIKA---IEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTIRQYEEAELRSQQER 756
+K+ I+ + + + K + + + +D K + + + +A + +E+
Sbjct: 758 TLKSTKEIQKKAEEKYEALENKMKNAEAEREKELKDAQKKLDCAKTKA--DASSKKMKEK 815
Query: 757 QK-----ICQDKDTKKNVARWERAVSDDEEELARAQGAEEKLAGEMRAEADKLENMRATR 811
Q+ + ++ K+ A E+ + E + +G EK+A E+ + + +
Sbjct: 816 QQEVEAITLELEELKREHASNEQQLDAVNEAIKAYEGQIEKMAAEVAKNKESVNKAQDEL 875
Query: 812 LTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSCVNLESKLEMKKSERHDILMNCKMND 871
+ +KQ + A D I EV A+ + N ES+L++K+ + H I + + D
Sbjct: 876 MKQKQIITAQDNIIKDKCAEV---------AKHNLQNNESQLKIKELD-HSISKHKREAD 925
Query: 872 ----IVLPMLR---------------VQKYDRKLAKSIQEMTSRLQTIQ--------APN 904
V ML YD K + +E RLQ +Q N
Sbjct: 926 DAAAKVSKMLSDYDWINAEKHLFGQPNSAYDFK-TNNPKEAGQRLQKLQEVKEKLGRNVN 984
Query: 905 LRAMEKLEHAKE---NLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEI 961
LRAM L A+E +LMK EN + K A + + +++ ++ V+ +
Sbjct: 985 LRAMNVLTEAEERYNDLMKKKRIVENDK---SKILATIEDLDQKKNQALNIAWQKVNKDF 1041
Query: 962 DGAGSESVLP--RPFLGPENPE-----EPLTYRVS----------------------TTI 992
G+ ++LP L P PE + L ++V+ + I
Sbjct: 1042 -GSIFSTLLPGANAMLAP--PEGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLI 1098
Query: 993 VSH-RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLV 1051
+S + PAP ++LDE+DAALD ++ + + T S Q IV+SLKE F++A+ L
Sbjct: 1099 LSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHS-QFIVVSLKEGMFNNANVLF 1157
>sp|P41004|SMC4_SCHPO Structural maintenance of chromosomes protein 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut3 PE=1 SV=2
Length = 1324
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 154/342 (45%), Gaps = 39/342 (11%)
Query: 283 AHNKDIADLETQLADVRKRKAEYE------RQSIPGRDINLESAQMTEYTNLKAEATKRA 336
+H+ D L +++AD+ R + E R+S+ G+ + +N E K
Sbjct: 472 SHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQGKTEGI--------SNAIEEKQKAM 523
Query: 337 GKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNE 396
L++++ + E++ Q +LD L ++ N++ E +Q +DKL + +N
Sbjct: 524 APALEKINQLTSEKQILQVELDMLLNKENDLINDV-------ESSQSSLDKLRNDAEENR 576
Query: 397 ASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAKTD----KHEDTRRKKKQE 452
L K+ +L + ++ ++ + L +T K + + +
Sbjct: 577 NILSSKLKVLSDLKGEKKDVSKNIERKKETVHNTYRNLMSNRTKLEEMKASLSSSRSRGN 636
Query: 453 LVENFKKAY-----SGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQ 507
++E+ ++ + +G + R+ ++ + + Y+VAI+ + IVVD+ +T + C+
Sbjct: 637 VLESLQRLHESDNLNGFFGRLGDLA-TIDEAYDVAISTACPA-LNHIVVDNIETGQKCVA 694
Query: 508 YLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNN 567
+L+ + L +F+ + L K L I+ P+NV L+D+L++ + N
Sbjct: 695 FLRSNNLGRASFIILKELAQK----NLARIQTPENVPRLFDLLRFNDQKFAPAFYNVLQN 750
Query: 568 ALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGG 609
LV + E A ++AY + R+ V L G KSG M+GG
Sbjct: 751 TLVAKNLEQANRIAYG---KTRWRVVTLSGQLIDKSGTMTGG 789
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 995 HRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
H Y P P +V+DEIDAALD N+ VA+YI +T+++ Q IVISL+ F + LVGI
Sbjct: 1247 HNYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNA-QFIVISLRSNMFELSSRLVGI 1304
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 8 IEVDNFKSYKGKFSIGPLK-KFTAVIGPNGSG 38
+ + NFKSY G +GP F++++GPNGSG
Sbjct: 129 LRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSG 160
>sp|P48996|DPY27_CAEEL Chromosome condensation protein dpy-27 OS=Caenorhabditis elegans
GN=dpy-27 PE=1 SV=1
Length = 1469
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 215/457 (47%), Gaps = 59/457 (12%)
Query: 278 RQANEAHNKDIADLETQLADVRKRKAEYERQS----IPGRDINLESAQMTEYTNL-KAEA 332
+Q ++ +D+ L + + R+ K E E I +++ LE Q+ E N+ + A
Sbjct: 410 KQGLKSCTQDLGKLMKERDEARREKFEIETAPENARISKQNMQLEWDQLKEQENVCQRTA 469
Query: 333 TKRAGKILQQLDTINREQKGD-QDKLDNELRQQVQ-------TQNEIKKKRHEMEEAQKR 384
T+ K Q+ + +R + D + KL +EL Q ++ +++E+K ME+ QKR
Sbjct: 470 TENLIKYDQK-SSADRAKHDDLEKKLSDELLQSMRAKAELDVSESELKDMTIMMEQGQKR 528
Query: 385 IDKLEDHIRQNEA-SLKDNKKLKEELNSDVGSSKNRVQELQKELEQV-----IEELGDAK 438
+D+L+ ++ A +++DN ELN+ ++R + K +E++ E+L +K
Sbjct: 529 VDELKGTLQTMMAENIRDNT----ELNAVTTELQDRKLKFDKAVEKLPHLKSTEQLLRSK 584
Query: 439 -----------TDKHEDTRRKKKQELVENFKKA--YSGVYDRMINMCH-PVHKRYNVAIT 484
++ E T R + + K+A + G R+ ++ P+ +++ AI+
Sbjct: 585 KYELDQEVIEASNTQEVTYRHQATAKLHELKEAGLFPGFKGRLGDLASIPI--KFDTAIS 642
Query: 485 KVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVK 544
V ++ VV + R+ I + +++L TF+ +D+L+ ++ P +
Sbjct: 643 TVFFAQLDYHVVQTSDECRIGIGFCHEYKLPRTTFVFLDHLKDTDTSGMDSTMKFP--AE 700
Query: 545 LLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSG 604
L+D + +I+R F ++ LV ++ E+A ++ +HRY L+G+ +SG
Sbjct: 701 RLFDKIHCVNPEIRREFYFLIHDILVVDSLEEATRIDKKYPGRHRY--CTLNGSILNRSG 758
Query: 605 IMSGGSLDLARKAKRWDDKEMGN--------LKAQKEKLSEELREAMKKSRKESELNTVQ 656
++GG + + ++ M L+A +EK + L +K K+ E+
Sbjct: 759 ALTGGGKPTTGRIRNDNNPNMSGVKKVDLSKLRAAQEKHNHALEAHLKLQLKQEEIRADN 818
Query: 657 S-TIKGLEIRLNYSRQDLQNTKSQ---IAKLEAEIDA 689
IK LEIR R+ + +TK Q IA+L++ I A
Sbjct: 819 GPIIKQLEIR---KRELIMSTKEQKTRIAELKSSIAA 852
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 995 HRYHPAPFFVLDEIDAALDNTNIGKVASYI--VTKTQDSLQTIVISLKEEFFSHADSLVG 1052
H Y P P +V+DEIDAALD N+ +A+YI +T+++ Q I+ISL+ + F + L+G
Sbjct: 1262 HHYRPTPLYVMDEIDAALDLNNVSLIANYIKHSERTRNA-QFIIISLRNQMFEVGNRLLG 1320
Query: 1053 I 1053
I
Sbjct: 1321 I 1321
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPL-KKFTAVIGPNGSG 38
I+ I V+NFKSY GK +GP K T ++GPNGSG
Sbjct: 92 IILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSG 127
>sp|P38989|SMC2_YEAST Structural maintenance of chromosomes protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC2 PE=1
SV=1
Length = 1170
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 168/346 (48%), Gaps = 41/346 (11%)
Query: 371 IKKKRHEMEEAQKRI----DKLEDHIRQNEASLKDNKKLKEELNS------DVGSSKNRV 420
IKK +ME +K + KL++ + NE ++K K+ +E + + G +R+
Sbjct: 417 IKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRI 476
Query: 421 QELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAYS--------GVYDRMINMC 472
++L++ +++ +T K+ + +++ L N+ K Y GV ++ +
Sbjct: 477 KDLKQREDKLKSHY--YQTCKNSEYLKRRVTNLEFNYTKPYPNFEASFVHGVVGQLFQID 534
Query: 473 HPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPE-TFLPIDYLQTKPLK 531
+ + RY A+ G + +VV +TA Q L+ +L T +P+D + T+P+
Sbjct: 535 ND-NIRYATALQTCAGGRLFNVVVQDSQTA---TQLLERGRLRKRVTIIPLDKIYTRPIS 590
Query: 532 ERLRNIRD---PKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQH 588
++ ++ P V+L +++++ E I + + F N+L+CE PE A K+ + P+
Sbjct: 591 SQVLDLAKKIAPGKVELAINLIRFD-ESITKAMEFIFGNSLICEDPETAKKITF--HPKI 647
Query: 589 RYDAVALDGTFYQKSGIMSGGSLD----LARKAKRWD--DKEMGNLKAQKEKLSEELREA 642
R ++ L G Y G +SGGS + L ++++ K++ ++A ++EEL+
Sbjct: 648 RARSITLQGDVYDPEGTLSGGSRNTSESLLVDIQKYNQIQKQIETIQADLNHVTEELQTQ 707
Query: 643 MKKSRKESELNTVQSTIKGLEIRLNYSRQDLQ-NTKSQIAKLEAEI 687
S+K T+QS + +L+ ++++L N SQI EI
Sbjct: 708 YATSQKTK---TIQSDLNLSLHKLDLAKRNLDANPSSQIIARNEEI 750
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 996 RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHAD 1048
++ PAP ++LDE+DAALD ++ + I T+ + S Q IV+SLKE F++A+
Sbjct: 1102 QFRPAPMYILDEVDAALDLSHTQNIGHLIKTRFKGS-QFIVVSLKEGMFANAN 1153
>sp|Q69GZ5|SMC_METVO Chromosome partition protein Smc OS=Methanococcus voltae GN=smc PE=3
SV=1
Length = 1199
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 893 MTSRLQTIQAPNLRAMEKLEHAKE---NLMKTNEEFENARKRAKKAKANFDRIKKER--- 946
+ S ++ ++ N+RA+E + E L +E+E + + + + KKE
Sbjct: 1000 LESSIKKLEPVNMRAIEDYDFINERYEELFGKRKEYEQEEGKYLQLISEVQKRKKETFMK 1059
Query: 947 -YDKFTRCFEHVSNEIDGAGSESVLPR--PFLG-------PEN-----------PEEPLT 985
YD+ +E + EI G G S+ PF G P N E+ LT
Sbjct: 1060 TYDRVAENYEQIYGEIGGNGKLSLENEEDPFSGGLLIDASPMNKQLQNLDVMSGGEKSLT 1119
Query: 986 YRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFS 1045
++ R +P+PF+VLDE+DAALD N + I +++S Q IVIS +E+ S
Sbjct: 1120 -ALAFLFAIQRLNPSPFYVLDEVDAALDTKNASLIGDMISNASKES-QFIVISHREQMIS 1177
Query: 1046 HADSLVGIC 1054
++ + G+C
Sbjct: 1178 KSNVMYGVC 1186
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 158/685 (23%), Positives = 296/685 (43%), Gaps = 127/685 (18%)
Query: 36 GSGALKDDYERLKAEMIQAEEETNMSYLKKKGVVAERKEAKIEKDEAEKYQRIREEIVAK 95
G + E+ K E+ QA E ++ V A ++ K EK++AEKY +++
Sbjct: 192 GVAEFDEKSEKAKKELSQAREYIEKIDIRINEVRANLEKLKKEKEDAEKYTVYNKKL--- 248
Query: 96 EVEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAK 155
++ K ++ L+ LD+ K E+E + K+ + ++++
Sbjct: 249 ----KVTKYILTSKKVEFLKMVLDETKDEIEAL--------------KETKNCYIQDISN 290
Query: 156 VDQEIREMDVEINKKRPSLI-KSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLET 214
+D EI + V+IN+ L K E V + K + + +L N D LE
Sbjct: 291 IDSEIIGLKVKINELVNELNEKGSEEVMELHKSIKELEVNL----------NNDKNALEN 340
Query: 215 QLADVRKRKAEYERQSIPGRDINLESAQDVEINKKRPSLIKSKERVSHIQ----KKLASA 270
+ D++ + +E +++ ++N ++KE++++I+ KK A A
Sbjct: 341 AIDDLK-------------HTLKMEESKNNDLN-------ETKEKINNIRIDTLKKEAEA 380
Query: 271 KKSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKA 330
K + E+ + NE ERQ NLE + +KA
Sbjct: 381 KVLIKEIEKLNE-----------------------ERQ-------NLEKKVEQSESQVKA 410
Query: 331 EATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLED 390
+ + K+ ++++ +E G L NEL Q +N + + + ++ + I+ L +
Sbjct: 411 LKNQES-KLSERINDTQKELYG----LKNELN---QLENTLNNRTFDYQKNNETIENLTN 462
Query: 391 HIRQNEASLKDNKKLKEELNS---DVGSSKNRVQELQKELEQVIEELGDAKTDKHEDTRR 447
I + + L+D KKL +EL ++ SK ++QE E +L + ++ ++ R
Sbjct: 463 QIAE-FSDLEDTKKLYKELEDIAVELEFSKKKLQEKITERNDSQSKLDNLHSEYVKENAR 521
Query: 448 KKKQELVENFK--KAYSGVYDR----MINMCHPVHK---RYNVAITKVLGKYMEAIVVDS 498
K + +ENF +A GV D ++++ + K Y AI G + IVV
Sbjct: 522 IKTLKDMENFSLDRAVKGVLDAKLPGVVDIAGNLAKTKGEYKTAIEVAGGARLNHIVVKK 581
Query: 499 EKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPEDIK 558
I YLK +L TFLP+D ++ K+ I D + D++++ DIK
Sbjct: 582 MDDGSRAINYLKQKRLGRATFLPMDRIKGMDAKD----ISDTGIIGKAIDLVEF---DIK 634
Query: 559 --RVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARK 616
V F N + + E+A K++ +++ V L+G + SG M GG++
Sbjct: 635 YTNVFKFIFGNTHIVDNLENAKKLSL----KYKARFVTLEGEVIEPSGAMVGGNIRRNSA 690
Query: 617 AK-RWDDKEMGNLKAQKEKLSEELREAMKK-SRKESELNTVQSTIKGLEIRLNYSR-QDL 673
K D K++ NL ++L + L + R +++NT + L+ RL +R Q+
Sbjct: 691 IKVDIDMKKLTNLSEDIKELEQILSNVKDEIERLNNKINTCSTRKLELDNRLKIARDQEF 750
Query: 674 QN---TKSQIAKLEAEIDALNARAD 695
+ TKS K++ E++ LN++ D
Sbjct: 751 KKEEITKSNNLKIK-ELNMLNSKID 774
>sp|Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis
thaliana GN=SMC2-1 PE=2 SV=2
Length = 1175
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 176/381 (46%), Gaps = 48/381 (12%)
Query: 246 INKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEY 305
+N K +L+ KE V I + KKS+ E A + + ADL+ + ++ E
Sbjct: 317 LNNKEDTLLGEKENVEKIVHSIEDLKKSVKERAAAVKKSEEGAADLKQRFQELSTTLEEC 376
Query: 306 ERQS---IPGRDINLESAQMTEYTNLKAEATKRAGKILQQLDT----INREQKGDQDKLD 358
E++ + G+ E + + A AG L+QL T +E K + +L
Sbjct: 377 EKEHQGVLAGKSSGDEEKCLEDQLRDAKIAVGTAGTELKQLKTKIEHCEKELKERKSQLM 436
Query: 359 NELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSSKN 418
++L + ++ +NE+ +++++E H+++ S+ N+ E L D G+
Sbjct: 437 SKLEEAIEVENELGARKNDVE-----------HVKKALESIPYNEGQMEALEKDRGAELE 485
Query: 419 RVQELQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKA-YSGVYDRMINMCHPVHK 477
VQ L+ ++ + +L + + + R NF ++ GV ++I V
Sbjct: 486 VVQRLEDKVRGLSAQLANFQFTYSDPVR---------NFDRSKVKGVVAKLIK----VKD 532
Query: 478 RYNVAITKVL-GKYMEAIVVDSEKTARLCIQYLKDHQLDPE-TFLPIDYLQTKPLKERLR 535
R ++ +V G + +VVDSE T + Q L++ L T +P++ +Q+ ++ R++
Sbjct: 533 RSSMTALEVTAGGKLYDVVVDSEDTGK---QLLQNGALRRRVTIIPLNKIQSYVVQPRVQ 589
Query: 536 N----IRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAY--DIEPQHR 589
+ N +L ++ Y E +K + + + VC+T + A +VA+ DI R
Sbjct: 590 QATARLVGKDNAELALSLVGYSDE-LKNAMEYVFGSTFVCKTTDVAKEVAFNRDI----R 644
Query: 590 YDAVALDGTFYQKSGIMSGGS 610
+V L+G +Q SG+++GGS
Sbjct: 645 TPSVTLEGDIFQPSGLLTGGS 665
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 997 YHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSL 1050
+ PAP ++LDE+DAALD ++ + I S Q IV+SLKE F++A+ L
Sbjct: 1102 FKPAPLYILDEVDAALDLSHTQNIGRMIRAHFPHS-QFIVVSLKEGMFNNANVL 1154
>sp|O66878|SMC_AQUAE Chromosome partition protein Smc OS=Aquifex aeolicus (strain VF5)
GN=smc PE=3 SV=1
Length = 1156
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 48/218 (22%)
Query: 885 KLAKSIQEMTSRLQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKK 944
KL + ++ +T +Q + + N RA E ++A+E L + N+ E +K +++KA ++ +
Sbjct: 937 KLKEKLKRVTEEIQKLGSVNFRAEE--DYAEE-LKRFNDYKEKQQKLKEESKA-IKKLIE 992
Query: 945 ERYDKFTRCFEHVSNEIDGAGSESVLPR--PFLGP--------ENPEEPLTYRVSTTI-- 992
E +K + F N+I+ + L R FL P +NPE+P + V T+
Sbjct: 993 ETENKKRKVFLEAFNQINKS-----LKRIFSFLSPGGKAQMFLDNPEDPFSGGVQLTVKP 1047
Query: 993 -------------------------VSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTK 1027
Y P+PF+ DE+DA LD N KV I K
Sbjct: 1048 RGKDVQYLEAMSGGEKTLAALSLIFALQEYKPSPFYYFDEVDAHLDEVNAKKVGELIREK 1107
Query: 1028 TQDSLQTIVISLKEEFFSHADSLVGICPGSVTISSICF 1065
++++ Q IV++L+E S AD +VG+ IS + F
Sbjct: 1108 SKEA-QFIVVTLREVVTSFADKIVGVSARG-GISEVFF 1143
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 7 YIE---VDNFKSYKGKFSIGPLKK-FTAVIGPNGSG 38
YIE V+ FKSY K PL + F AV+GPNG+G
Sbjct: 6 YIEKIVVEGFKSYGTKRKEIPLGEGFIAVVGPNGAG 41
>sp|B9E1H0|SMC_CLOK1 Chromosome partition protein Smc OS=Clostridium kluyveri (strain
NBRC 12016) GN=smc PE=3 SV=1
Length = 1185
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 28/182 (15%)
Query: 453 LVENFKKAYSGVYDRMINM----------------CHPV------HKRYNVAITKVLGKY 490
++ NF K Y G Y+R + C V K++ I LG
Sbjct: 497 MLVNFHKHYEG-YNRTVKALMENIKNHKLDVPAQSCFLVGEIISLQKKFETCIEISLGNS 555
Query: 491 MEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKN-VKLLYDV 549
+ +++ ++E A++ I+YLKD+++ TFLPI ++ + + L D K + + ++
Sbjct: 556 ISSVITNNEIIAKIIIKYLKDNKMGRATFLPISIIKGRKI-SNLHKFEDIKGFIGVASEL 614
Query: 550 LKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGG 609
+ Y E K V+ + ++CE ++A ++A ++ + V L G G ++GG
Sbjct: 615 VSYSKE-FKDVLDYILGRTIICENIDNAFEIAK--LAEYSFKIVTLSGDVVNSGGAITGG 671
Query: 610 SL 611
SL
Sbjct: 672 SL 673
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 32/203 (15%)
Query: 890 IQEMTSRLQTIQAPNLRAMEK----------LEHAKENLMKTNEEFENA-----RKRAKK 934
I + S + + NL A+E+ L KE+L+K+ +E + K
Sbjct: 981 IVHLKSSISKLGVVNLGAIEEYKNLQKKITFLSSQKEDLIKSKQELKKVIDAMTEKMKGV 1040
Query: 935 AKANFDRIKKERYDKFTRCFEHVS--------NEIDGAGSESVLPRPFLGPEN------P 980
K NF ++KK D F F+ S +E+ G +V P P +N
Sbjct: 1041 FKENFVKLKKNFNDTFRELFKGGSADLVLTKGDELTGNIDITVQP-PGKKLQNINLMSGG 1099
Query: 981 EEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLK 1040
E+ L+ ++ + P PF +LDEI+A+LD+ N+ + A ++ ++D+ Q IVI+ +
Sbjct: 1100 EKGLS-AIALLFAMLKIKPTPFCILDEIEASLDDANVLRYAEFLRKFSRDT-QFIVITHR 1157
Query: 1041 EEFFSHADSLVGICPGSVTISSI 1063
+ +D L G+ +S I
Sbjct: 1158 KGTMEVSDVLYGVTMEEKGVSKI 1180
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 1 MSPILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
MS L+ IE+ FKS+ K + T+++GPNGSG
Sbjct: 1 MSMFLKTIEIKGFKSFADKTELIFTGGITSIVGPNGSG 38
>sp|Q5N0D2|SMC_SYNP6 Chromosome partition protein Smc OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=smc PE=3 SV=2
Length = 1195
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 57/206 (27%)
Query: 876 MLRVQKYDRKLAKSIQEMTSRLQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKA 935
ML +++Y+R A+ ++E++ +L TI+A E+ E L+ E F R+RA
Sbjct: 1005 MLALEEYERTQAR-LEELSEKLTTIEA------ERTE-----LLLRIENFTTLRRRA--F 1050
Query: 936 KANFDRIKKERYDKFTRCFEHVSNEIDGAGSESVLPRPFLGPENPEEPLTYRV------- 988
+F+ I + F F H+S DG GS L +NPE+P + +
Sbjct: 1051 MESFEAIDR----NFQEIFAHLS---DGDGS--------LQLDNPEDPFSSGLNLIAHPK 1095
Query: 989 ---------------STTIVS-----HRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKT 1028
S T +S RY P+PF+ LDE+D+ LD N+ ++A I +
Sbjct: 1096 GKPVRRLASMSGGEKSLTALSFIFALQRYRPSPFYALDEVDSFLDGANVERLARVIRQQA 1155
Query: 1029 QDSLQTIVISLKEEFFSHADSLVGIC 1054
Q + Q IV+S + A+ +G+
Sbjct: 1156 QAA-QFIVVSHRRPMIEAAERTIGVT 1180
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 8 IEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
IE+ +FKS+ G S+ L +FT V GPNGSG
Sbjct: 7 IELSHFKSFGGTTSLPLLPEFTVVTGPNGSG 37
>sp|Q00737|SUDA_EMENI Chromosome segregation protein sudA OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=sudA PE=2 SV=3
Length = 1215
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 154/659 (23%), Positives = 283/659 (42%), Gaps = 107/659 (16%)
Query: 361 LRQQVQTQNE-IKKKRHEMEEAQKRIDKLEDH------IRQNEASLKDNKKLKEE---LN 410
LRQQ+ + + I+ +++ A+ D+L D R + A+L +++L E L+
Sbjct: 437 LRQQIDGRGDTIQSVEQQVQAAKDERDRLMDQRKYVDWPRTSCATLTIHRELWREEAKLD 496
Query: 411 SDVGSSKNRVQELQKELEQVIEELGDAKTDKH-EDTRRKKKQELVENFKKAYSGVYDRMI 469
S + ++ N V ++ L Q++ D T + RR K+Q +E GVY +
Sbjct: 497 SILINASNEVDRAERNLSQMM----DHNTSRGIAAVRRIKRQHNLE-------GVYGTLA 545
Query: 470 NMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKP 529
+ V+ RY A+ G+ + VVD++ TA ++ L+ + TF+P++ L+TKP
Sbjct: 546 ELFE-VNDRYRTAVEVTAGQSLFHYVVDTDDTATKVLEILQHEKAGRVTFMPLNRLRTKP 604
Query: 530 LKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHR 589
L + P KL YD ++ ++C ++VA H
Sbjct: 605 LNMPKASDTIPMIEKLQYD------RAYEKAFQHVFGKTIICPN----LQVASQYARSHG 654
Query: 590 YDAVALDGTFYQKSGIMSGG-------SLDLARKAKRWDD-----KEMGN-LKAQKEKLS 636
+A +G K G ++GG LD + +W D K G+ ++ + E+L
Sbjct: 655 VNATTPEGDRSDKRGALTGGFHDSRQSRLDAVKNLAKWRDEYETKKSRGSEIRKELEELD 714
Query: 637 EELREAMKKSRK-ESELNTVQSTIKGL--EIR------------LNYSRQDLQNTKSQIA 681
+ + A+ + +K E + + VQ++ L E+R L+ R+ L+N + +A
Sbjct: 715 QLITRAVGELQKLEQQRHQVQNSSGPLRQELRSKRDLLQKQNDNLDAKRRALRNIEGNLA 774
Query: 682 KLEAEIDALNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIG--- 738
L+ ++DA A+ + P KA+ AR ++++ +E R++ + G
Sbjct: 775 ALKDQVDAFE--AELSSPFHKALTDEEEARLESLNSNVQEYR-------REYQELSGKRS 825
Query: 739 -VSTIRQYEEAELR---SQQERQKICQDKDTKKNVARWERAVSDDEEELARAQGAEEKLA 794
+ T + E ELR + + Q + QD D + + + + E R +KLA
Sbjct: 826 ELETRKSVLEVELRENLNPRLDQLLAQDADIADEDGQGN--IKETQREQKRLTKVLDKLA 883
Query: 795 GEMRAEADKLE--NMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQKSCVNLESK 852
+ + +E N R T LT++ A ++RRE+ +AK I+ Q+ +E
Sbjct: 884 QRLAQVDESMEQANSRVTELTQRNA---------ESRRELEELAKSIEKHQR---RMEKS 931
Query: 853 LEMKKSERHDILMNCKMN--DI-VLPMLRVQKY----DRKLAKSIQEMTSRLQTIQAPNL 905
++ KK+ C N D+ VLP KY + K + ++ L+ N
Sbjct: 932 MQ-KKAALTKQAAECAANIRDLGVLPDEAFTKYKNTDSNTVVKKLHKVNEALKKYAHVNK 990
Query: 906 RAMEKLEH---AKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEI 961
+A E+ + +E L EE + ++K + D K E + R F+ VS E
Sbjct: 991 KAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVLDHRKDEAIE---RTFKQVSREF 1046
>sp|Q7ZAK1|SMC_THEEB Chromosome partition protein Smc OS=Thermosynechococcus elongatus
(strain BP-1) GN=smc PE=3 SV=1
Length = 1168
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 133/671 (19%), Positives = 265/671 (39%), Gaps = 130/671 (19%)
Query: 468 MINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPIDYL-Q 526
++ V RY +A+ G + IVV + A I LK Q TFLP++ + +
Sbjct: 526 LVAQLGQVEPRYQLALEIAAGARLGNIVVADDSVAAAAIALLKREQAGRATFLPLNKMAR 585
Query: 527 TKPLKERLRNIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEP 586
KPL I + +++ ++P+ + + + LV E+ E A E
Sbjct: 586 PKPLSP----IALAGCIDYALNLVTFEPQ-YAPIFAYVFGSTLVFESLEAAR------EY 634
Query: 587 QHRYDAVALDGTFYQKSGIMSGGS------LDLARKAKRWDDKEMGNLK----------- 629
+Y V L+G + SG M+GGS L A+ + E+ ++
Sbjct: 635 LGQYRMVTLEGELLEPSGAMTGGSQRRPNTLRFAQGVPPQESAEVQQVRDRLGELERLLD 694
Query: 630 ----------AQKEKLSEELREAMKKSRKESELNTVQSTIKG--------LEIRLNYSRQ 671
+ LS+ L EA + R + LE + Y Q
Sbjct: 695 RLLQERTHQQGRVNALSQALSEAHQSHRDRQRQWEQLQQQQQQLNRQQAELERQQQYLSQ 754
Query: 672 DLQNTKSQIAKLEAEIDALNARADATEPKIKAIEASMT----ARGDTISRKKEEMNSVED 727
+L ++++ LEA + L A A + A+EAS + + + +E++++ +
Sbjct: 755 ELTAAETELTHLEARLPELEAELAAERLALNALEASPSHQQWQQVQAQLQAQEKIHASQV 814
Query: 728 IVFRDFCKSIGVSTIRQYEEAEL---RSQQERQKICQ-DKDTKKNVARWERAVSDDEEEL 783
+ +++G RQ E+ E +++QE Q++CQ ++ + ++ + D ++
Sbjct: 815 AALQAVDQALG-DRHRQLEQLERDLKQTEQEIQRLCQAQREMRCQQQALDQTLGDLATQI 873
Query: 784 ARAQGAEEKLAGEMRAEADKLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKDIQAAQ 843
R Q A +R +L +++ R D + ++ + ++ + Q A
Sbjct: 874 ERTQAA-------LRELDSRLGHLKGDR-------DRHEYQLRQQQKNYQQLEWQYQKAS 919
Query: 844 KSCVNLESKL-EMKKSERHDILMNCKMNDIVLPMLRVQKYDRKLAKSIQEMTSRLQTIQA 902
++ L+++L E+ E + L + R + + Q + RL+ ++
Sbjct: 920 ETLTTLQAQLQELSTIEPPPLPQPLPEVPAELSL-------RDIQQQCQALEQRLRAMEP 972
Query: 903 PNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKA-----NFDRIK----KERYDKFTRC 953
N+ A+++ E + L + E+ A A++ + NF ++ +E +D
Sbjct: 973 VNMLAIQEFEETQARLKELQEKL--AVLAAERTEILLRIENFTTLRHQSFREAFDAINAN 1030
Query: 954 FEHVSNEI-DGAGSESVLPRPFLGPENPEEPLTYRVSTTIVSH----------------- 995
F+ + + DG G +L E+PE+P + +V+H
Sbjct: 1031 FQTIFATLSDGDG--------YLQLESPEDP--FAGGLNLVAHPKGKPVQRLASMSGGEK 1080
Query: 996 ------------RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEF 1043
RY P+PF+ DE+D LD N+ ++A ++ + Q IV+SL+
Sbjct: 1081 SLTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLAK-MIQQQSQQAQFIVVSLRRPM 1139
Query: 1044 FSHADSLVGIC 1054
A +G+
Sbjct: 1140 IEAAQRTIGVT 1150
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 8 IEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
+E+ NFKS+ G I L FT + GPNGSG
Sbjct: 6 LELTNFKSFGGTTVIPLLPGFTVISGPNGSG 36
>sp|P47037|SMC3_YEAST Structural maintenance of chromosomes protein 3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC3 PE=1
SV=1
Length = 1230
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 130/569 (22%), Positives = 245/569 (43%), Gaps = 111/569 (19%)
Query: 117 ELDKKKGEVEKIERRKEKAENILREKKKEQGAL-NRELAKVDQEIREMDVEINKKRPS-- 173
EL+ K E+E+ + EK + R +K Q L +REL +V ++ +D + N S
Sbjct: 202 ELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDRELNEVINQMERLDGDYNNTVYSSE 261
Query: 174 -----LIKSKERVSHIQKKLASAKKSL-----VEVRQA----NEAHNKDIADLETQLADV 219
L K ++ + + KKL+S + SL +++QA +E K + ++ ++ DV
Sbjct: 262 QYIQELDKREDMIDQVSKKLSSIEASLKIKNATDLQQAKLRESEISQK-LTNVNVKIKDV 320
Query: 220 RKRKAEYERQSIPGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQ 279
+++ E Q NL+SA EI S+I+ + ++KL+ E+ +
Sbjct: 321 QQQIESNEEQR------NLDSATLKEI----KSIIEQR------KQKLSKILPRYQELTK 364
Query: 280 ANEAHNKDIADLETQLADVRKRKAEYER-QSIPGRDI-----------------NLESAQ 321
+ +A L+ + D+ +K EY R +S RD LES
Sbjct: 365 EEAMYKLQLASLQQKQRDLILKKGEYARFKSKDERDTWIHSEIEELKSSIQNLNELESQL 424
Query: 322 MTEYTNLKAEATKRAGKILQQLDTINR-EQKGDQDKLDNELRQQVQTQNEIKKKRHEM-- 378
+ T+L+ + + +I + +D+IN + KG + D+EL Q +E R E+
Sbjct: 425 QMDRTSLRKQYSAIDEEIEELIDSINGPDTKGQLEDFDSELIHLKQKLSESLDTRKELWR 484
Query: 379 --EEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGD 436
++ Q ++ L + QN+ ++ N+ + L + + + K ++L+ E V LG
Sbjct: 485 KEQKLQTVLETLLSDVNQNQRNV--NETMSRSLANGIINVKEITEKLKISPESVFGTLG- 541
Query: 437 AKTDKHEDTRRKKKQELVENFKKAYSGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVV 496
EL++ V+ +Y + G + IVV
Sbjct: 542 ---------------ELIK-------------------VNDKYKTCAEVIGGNSLFHIVV 567
Query: 497 DSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPKNVKL------LYDVL 550
D+E+TA L + L + TF+P++ L +++ P N L +
Sbjct: 568 DTEETATLIMNELYRMKGGRVTFIPLNRLSLDS------DVKFPSNTTTQIQFTPLIKKI 621
Query: 551 KYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGS 610
KY+P ++ V +V + +K+A +H+ +A+ LDG K G+++GG
Sbjct: 622 KYEPR-FEKAVKHVFGKTIVVKDLGQGLKLA----KKHKLNAITLDGDRADKRGVLTGGY 676
Query: 611 LDLARKAKRWDDKEMGNLKAQKEKLSEEL 639
LD ++ + K + ++Q +K+ EEL
Sbjct: 677 LDQHKRTRLESLKNLNESRSQHKKILEEL 705
>sp|O95347|SMC2_HUMAN Structural maintenance of chromosomes protein 2 OS=Homo sapiens
GN=SMC2 PE=1 SV=2
Length = 1197
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 29/262 (11%)
Query: 366 QTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSD---VGSSKNRVQE 422
Q Q ++K + E++ Q + K++ R+++ +L+ K+LKE+L ++ + +N+ +
Sbjct: 418 QAQMKLKHAQQELKNKQAEVKKMDSGYRKDQEALEAVKRLKEKLEAEMKKLNYEENKEES 477
Query: 423 LQKELEQVIEELGDAKTDKHEDTRRKKKQELVENFKKAY---------SGVYDRMINMCH 473
L ++ Q+ ++G K R N + AY + V + ++
Sbjct: 478 LLEKRRQLSRDIGRLKETYEALLAR------FPNLRFAYKDPEKNWNRNCVKGLVASLIS 531
Query: 474 PVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPE-TFLPIDYLQTKPLK- 531
A+ V G+ + +VVD+E T + + L+ +L T +P++ + + +
Sbjct: 532 VKDTSATTALELVAGERLYNVVVDTEVTGK---KLLERGELKRRYTIIPLNKISARCIAP 588
Query: 532 ERLR---NIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQH 588
E LR N+ P NV + +++Y+PE +++ + F VC+ ++A KVA+D
Sbjct: 589 ETLRVAQNLVGPDNVHVALSLVEYKPE-LQKAMEFVFGTTFVCDNMDNAKKVAFDKRIMT 647
Query: 589 RYDAVALDGTFYQKSGIMSGGS 610
R V L G + G +SGG+
Sbjct: 648 R--TVTLGGDVFDPHGTLSGGA 667
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 997 YHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLV 1051
+ PAP ++LDE+DAALD ++ + + T S Q IV+SLKE F++A+ L
Sbjct: 1104 FKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHS-QFIVVSLKEGMFNNANVLF 1157
>sp|P41508|SMC_MYCHR Chromosome partition protein Smc OS=Mycoplasma hyorhinis GN=smc
PE=1 SV=2
Length = 979
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 115/231 (49%), Gaps = 21/231 (9%)
Query: 462 SGVYDRMINMCHPVHK---RYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPET 518
S ++D I + + K +++AI VLG + IV+ + + I +LK + T
Sbjct: 415 SFLFDGYIGLASELFKVESEFSLAIETVLGAALNQIVMKTSEDVLQAIDFLKKNLSGKAT 474
Query: 519 FLPIDYLQTKPLKE-RLRNIRDPKN-VKLLYDVLKYQPEDIKRVVLFATNNALVCETPED 576
F+P+ ++ + ++E L ++ K + + +++++ + ++ F N LV + ++
Sbjct: 475 FIPLTSIKEREVREDHLLVLKGQKGFLGVAKELIEFDTQ-FNKLFGFLLGNILVVDNVDN 533
Query: 577 AMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDD---KEMGNLKAQKE 633
A ++A ++ H+Y V+L+G ++ G ++GGS L R + D KE N E
Sbjct: 534 ANRIAKILD--HKYTIVSLEGDLFRPGGTITGGS-KLERTSILNYDIKIKEHTNTLKFAE 590
Query: 634 KLSEELREAMKKSRKESELNTVQSTIKGLEI-------RLNYSRQDLQNTK 677
+L+ +K+ +E+ TV STI+ ++I +LN ++L N K
Sbjct: 591 DQIHDLK--IKQQTIYNEIETVNSTIQQVKIEANSINSKLNILNEELNNLK 639
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 972 RPFLGPENPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDS 1031
R F G E +S + P P +LDE++AALD +N+ + ++ +++
Sbjct: 876 RLFSGGEKA----IIAISLLFAILKARPIPLCILDEVEAALDESNVIRYVEFLKLLKENT 931
Query: 1032 LQTIVISLKEEFFSHADSLVGICPGSVTISSIC 1064
Q ++I+ + S D L+G+ ++SI
Sbjct: 932 -QFLIITHRSGTMSRVDQLLGVTMQKRGVTSIF 963
>sp|Q7NG51|SMC_GLOVI Chromosome partition protein Smc OS=Gloeobacter violaceus (strain PCC
7421) GN=smc PE=3 SV=1
Length = 1165
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 46/201 (22%)
Query: 897 LQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYD-------- 948
L+ +QA LR +LE + M EE++ +R + +++ER +
Sbjct: 949 LEQLQATRLRKQRRLEALEPVNMLAIEEYDRTAERQGELSEKLATLQRERSELLLRIEDC 1008
Query: 949 ------KFTRCFEHVSNEIDGAGSESVLPRPFLGPENPEEPLTYRVSTTIVSH------- 995
F + F+ V+ +E L E+P+ P + T+V+H
Sbjct: 1009 DTLKRSAFMQAFDAVNTHFQSLFAELSDGDGHLALEDPDNP--FAGGLTLVAHPRGKQVR 1066
Query: 996 ----------------------RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQ 1033
RY P+PF+ DE+D LD N+ ++A +V + +S Q
Sbjct: 1067 RLEAMSGGEKSLTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLAK-MVRQQANSTQ 1125
Query: 1034 TIVISLKEEFFSHADSLVGIC 1054
+V+SL+ AD +G+
Sbjct: 1126 FLVVSLRRPMIERADRAIGVT 1146
>sp|P73340|SMC_SYNY3 Chromosome partition protein Smc OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=smc PE=3 SV=1
Length = 1200
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 37/196 (18%)
Query: 876 MLRVQKYDRKLAKSIQEMTSRLQTIQAPNLRAMEKLEHAKENLMKTNEEFENARKRAKKA 935
ML +Q+Y++ A+ + E++ +LQTI A E+ E L+ E F R+R+
Sbjct: 1011 MLALQEYEKTEAR-LGELSEKLQTI------AGERTE-----LLLRIENFTTLRRRS--F 1056
Query: 936 KANFDRIKKERYDKFTRCFEHVSN-----EIDGA-----GSESVLPRPFLGP-------E 978
+ FD + K F F +S+ ++D A G +++ P P
Sbjct: 1057 QDAFDAVNK----NFQIIFAELSDGDGYLQLDDAEDPFNGGLNLVAHPKGKPVRRLSSMS 1112
Query: 979 NPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVIS 1038
E+ LT +S RY P+PF+ DE+D LD N+ K+ S +V K Q IV+S
Sbjct: 1113 GGEKSLTA-LSFIFALQRYRPSPFYGFDEVDMFLDGANVEKL-SKMVRKQAQQAQFIVVS 1170
Query: 1039 LKEEFFSHADSLVGIC 1054
L+ A+ +G+
Sbjct: 1171 LRRPMIEAAERTIGVT 1186
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 8 IEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
IE+ +FKS+ G +I L FT V GPNGSG
Sbjct: 7 IELSHFKSFGGTTAIPFLPGFTVVSGPNGSG 37
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 108/547 (19%), Positives = 229/547 (41%), Gaps = 106/547 (19%)
Query: 78 EKDEAEKYQRIREEIVAKEVEHQLFKLYHNETDIKELEDELDKKKGEVEKIERRKEKAEN 137
++ +AEKYQ +R+++ K+ ++ + E ++L +L++ + + ++I++ ++
Sbjct: 227 DRQKAEKYQALRQQVQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQIQQALDQRSQ 286
Query: 138 ILREKKKEQGALNRELAKVDQEIREMDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVE 197
++ ++ E LN ++ + +E ++ V L K + +Q++ + +
Sbjct: 287 AIQTQQTELEKLNAQVKALGEE-EQLAVA-----AQLATQKAQRDQLQQRYNDGDRQITN 340
Query: 198 VRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQDVEINKKRPSLIKSK 257
+Q +I+ + Q +++ K+ + Q++P + ++++Q +
Sbjct: 341 HQQQVGQIQAEISQSQQQFLHIQQEKSFHNTQTLPQLEAAVQTSQ------------QQL 388
Query: 258 ERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKRKAEYERQSIPGRDINL 317
E++ H + +ASA ++ V Q ++ + L+ +L R + A+ L
Sbjct: 389 EQLRHQAQAIASASEAWV---QEQTQLSRTVNQLQDELIPQRSQLAQ------------L 433
Query: 318 ESAQMTEYTNLKAEATKRAGKILQQLDTINREQKGDQDKLDNELRQQVQT----QNEIKK 373
E Q TNL AE T K+ +L+ Q G + L Q+QT ++++
Sbjct: 434 EERQQQLLTNL-AELTPLLTKVSVELEEKQFAQ-GQFNFQGEALTSQIQTLASDLAQLEQ 491
Query: 374 KRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEE 433
+R ++E Q R+ LKE+ QE Q++L+++
Sbjct: 492 ERSLLQETQTRL-------------------LKEQ------------QEKQRQLDKL--- 517
Query: 434 LGDAKTDKHEDTRRKKKQELVENFKKAYSGVYDRMINMCHPVHKRYNVAITKVLGKYMEA 493
+A + ++ + +++ + GV ++ V +Y +A+ G +
Sbjct: 518 --EAASQAQQEVQGTYATKVI--LQSDLPGVCG-LVAQLGQVEPQYQLALEIAAGGRLGF 572
Query: 494 IVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNIRDPK--NVKLLY---- 547
+VV+ + A I+ LK + TFLP++ IR PK N L Y
Sbjct: 573 LVVEDDGVAAAGIEILKQAKAGRATFLPLN------------KIRPPKGQNPNLSYAHGY 620
Query: 548 -DVLKYQPEDIKR---VVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKS 603
D+ + +R + F N +V D + A + +HR V L+G + S
Sbjct: 621 IDLAVNLIDGDRRYADIFAFIFGNTIVF----DTLVNARNHLGKHRI--VTLEGDLLEAS 674
Query: 604 GIMSGGS 610
G MSGGS
Sbjct: 675 GAMSGGS 681
>sp|P41003|SMC2_SCHPO Structural maintenance of chromosomes protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut14 PE=1 SV=2
Length = 1172
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 996 RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
+Y PAP ++LDEIDAALD ++ + I TK + S Q I++SLKE F++A+ L +
Sbjct: 1104 KYKPAPMYILDEIDAALDLSHTQNIGRLIKTKFKGS-QFIIVSLKEGMFTNANRLFHV 1160
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 57/355 (16%)
Query: 290 DLETQLADVRKRKAEY---------ERQSIPGRDIN----LESAQMTEYTNLKAEATKRA 336
+LET L RKR E E QSI +D L S+ T + + T +
Sbjct: 341 ELETLLRGKRKRLDEVLSVYEKRKDEHQSI-SKDFKSQEELISSLTTGLSTTEGHETGYS 399
Query: 337 GKILQQLDTIN---REQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIR 393
K+ + DT+N E++ ++ KL+ +Q T+ + + ++ + ID L++H+
Sbjct: 400 RKLHEARDTLNDFKAEKETNRLKLEGLNKQISLTKPKKAEATKRCDQLNREIDILQNHVE 459
Query: 394 QNEASLKDNKKLKEELNSDVGSS---KNRVQELQKELEQVIEELGDAK----------TD 440
+ + SLK+ NSD+ + ++++L K+ ++ EL K TD
Sbjct: 460 KLKMSLKNT-------NSDITGEDVLQQKLKQLAKDRGNLLNELDALKSKLAYMEFTYTD 512
Query: 441 KHEDTRRKKKQELVENFKKAYSGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEK 500
+ R K + LV YD+ A+ G + ++V++EK
Sbjct: 513 PTPNFDRSKVKGLVAQLLTLNEENYDK------------QTALEITAGGRLYNLIVETEK 560
Query: 501 TARLCIQYLKDHQLDPETFLPIDYLQTKPLK-ERLRNIRDPKNVK--LLYDVLKYQPEDI 557
+Q K + T +P++ + + ER+ + N K L +++ Y E +
Sbjct: 561 IGAQLLQ--KGNLKRRVTIIPLNKITSFVASAERVGAAKKISNNKAQLALELIGYDDE-L 617
Query: 558 KRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLD 612
+ + + LVC+TPE A KV + P + +V LDG Y SG ++GGS++
Sbjct: 618 LPAMQYVFGSTLVCDTPESAKKVTF--HPSVKLKSVTLDGDVYDPSGTLTGGSVN 670
>sp|Q88WJ9|SMC_LACPL Chromosome partition protein Smc OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=smc PE=3 SV=1
Length = 1185
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 38/168 (22%)
Query: 911 LEHAKENLMKTNEEFENARKRAKKAKANFDRIKKERYDKFTRCFEHVSNEIDGAGSESVL 970
L AKE+L++T + + A + K FD++ E F+ FE + G +E +L
Sbjct: 1010 LTEAKEHLLQTMADLDTTV--ATRFKTAFDQVASE----FSTIFEQM---FGGGKAELIL 1060
Query: 971 PRP------------------------FLGPENPEEPLTYRVSTTIVSHRYHPAPFFVLD 1006
P G E +T + V P PF +LD
Sbjct: 1061 TDPEHLLTSGVDIMAQPPGKKFQRLSLLSGGERALTAITLLFAILAV----RPVPFSILD 1116
Query: 1007 EIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGIC 1054
E +AALD+ N+ + + Y+ Q Q ++I+ ++ HAD L G+
Sbjct: 1117 EAEAALDDANVDRFSQYL-NDFQTGTQFVIITHRKGTMMHADVLYGVT 1163
>sp|P51834|SMC_BACSU Chromosome partition protein Smc OS=Bacillus subtilis (strain 168)
GN=smc PE=1 SV=3
Length = 1186
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 111/541 (20%), Positives = 238/541 (43%), Gaps = 87/541 (16%)
Query: 103 KLYHNETDIKELEDELDKKKGEVEKIERRKEKAENILREKKKEQGALNRELAKVDQEIRE 162
KL+ + ++ +ED L + +G+VE ++ + A++ L +KK EL V+ +
Sbjct: 180 KLFETQDNLNRVEDILHELEGQVEPLKIQASIAKDYLEKKK--------ELEHVEIALTA 231
Query: 163 MDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANEAHNKDIADLETQLADVRKR 222
D+E + K ++ K+ + ++ A + I+ E ++ D R +
Sbjct: 232 YDIE----------------ELHGKWSTLKEKVQMAKEEELAESSAISAKEAKIEDTRDK 275
Query: 223 KAEYERQSIPGRDINLESAQDVEINKKRPSLIKSKERVSHIQKKLASAKKSLVEVRQANE 282
I D +++ Q V L+ + E + ++ +K +++ R+ N
Sbjct: 276 --------IQALDESVDELQQV--------LLVTSEELEKLE-----GRKEVLKERKKNA 314
Query: 283 AHNKDIADLETQLADVRKRKAEYERQSIPGRDINLESAQMTEYTNLKAEATKRAGKILQQ 342
N++ LE + ++++ ++ + ++ E+ Q E L+A+ ++ +
Sbjct: 315 VQNQE--QLEEAIVQFQQKETVL-KEELSKQEAVFETLQ-AEVKQLRAQVKEKQQAL--S 368
Query: 343 LDTINREQKGDQDKLD--NELRQQVQTQNEIKKKRHEMEEAQKRIDKLED----HIRQNE 396
L N E+K +Q K D L Q +NE++ +M ++ + +L D H+++
Sbjct: 369 LHNENVEEKIEQLKSDYFELLNSQASIRNELQLLDDQMSQSAVTLQRLADNNEKHLQERH 428
Query: 397 -------ASLKDNKKLKEELNSDVGSSKN-RVQELQKELEQVIEELGDAKTDKHEDTRRK 448
A + ++++E++S VG+ ++ + + QK+ + E + ++ R
Sbjct: 429 DISARKAACETEFARIEQEIHSQVGAYRDMQTKYEQKKRQYEKNESALYQAYQYVQQARS 488
Query: 449 KKQELVENFKKAYSGVY----------DRMINMCHPV------HKRYNVAITKVLGKYME 492
KK +++E + +SG Y +R+ + V ++Y AI LG +
Sbjct: 489 KK-DMLETMQGDFSGFYQGVKEVLKAKERLGGIRGAVLELISTEQKYETAIEIALGASAQ 547
Query: 493 AIVVDSEKTARLCIQYLKDHQLDPETFLPIDYLQTKPLKERLRNI--RDPKNVKLLYDVL 550
+V D E++AR IQYLK + TFLP+ ++ + L+ R R + + +++
Sbjct: 548 HVVTDDEQSARKAIQYLKQNSFGRATFLPLSVIRDRQLQSRDAETAARHSSFLGVASELV 607
Query: 551 KYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGS 610
+ P + V+ L+ E + A ++A + HRY V L+G G M+GG+
Sbjct: 608 TFDPA-YRSVIQNLLGTVLITEDLKGANELAKLL--GHRYRIVTLEGDVVNPGGSMTGGA 664
Query: 611 L 611
+
Sbjct: 665 V 665
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 999 PAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGICPGSV 1058
P PF VLDE++AALD N+ + A Y+ + D+ Q IVI+ ++ AD L G+
Sbjct: 1110 PVPFCVLDEVEAALDEANVFRFAQYLKKYSSDT-QFIVITHRKGTMEEADVLYGVTMQES 1168
Query: 1059 TISSIC 1064
+S +
Sbjct: 1169 GVSKVI 1174
Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 4 ILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
L+ ++V FKS+ + S+ +K TAV+GPNGSG
Sbjct: 2 FLKRLDVIGFKSFAERISVDFVKGVTAVVGPNGSG 36
>sp|Q09591|MIX1_CAEEL Mitotic chromosome and X-chromosome-associated protein mix-1
OS=Caenorhabditis elegans GN=mix-1 PE=1 SV=2
Length = 1244
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 988 VSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHA 1047
+S + ++ PAP ++LDE+DAALD ++ + I T + Q I++SLK+ FS+A
Sbjct: 1110 LSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHN-QFIIVSLKQGMFSNA 1168
Query: 1048 DSLV 1051
D L
Sbjct: 1169 DVLF 1172
Score = 40.8 bits (94), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 187/435 (42%), Gaps = 73/435 (16%)
Query: 351 KGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEASLKDNKKLKEELN 410
KG+ +++E++ T +++ + A+KR ++L + I+ E + L
Sbjct: 391 KGEHVSIESEIQSCKSTASQMSSG---ITAAKKRGERLHNQIKHLEG---EKATLSARSK 444
Query: 411 SDVGSSKNRVQELQKELEQVIEELG---DAKTDK-------HEDTRRKKKQE--LVENFK 458
SD+GS+ N +E+ E+ + ++ LG DA T+K HE + K + L+ ++K
Sbjct: 445 SDIGSADNYQKEVD-EINKQLQLLGFNIDADTEKREHAAKLHESITKLKDMDTRLLNSYK 503
Query: 459 KA-YSGVYDR--------------------MINMCHPVHKRYNVAITKVLGKYMEAIVVD 497
Y+ Y R +I M P +++ VA LG + +VV
Sbjct: 504 DGRYALNYQRPPLHIDKFDEKRDVFGYVAHLIKM-KPGCEQFAVAADIALGGVLGNVVVS 562
Query: 498 SEKTARLCIQYLKDHQLDPETFLPID--------YLQTKPLK-ERLRNIRDPKN--VKLL 546
++ AR+ I +T +P+ Y +K R + I + N V +
Sbjct: 563 TQDIARILID--GKAFTSRKTMIPVSENARNASSYNTLPDVKLRRAKEIAEKYNDTVTKM 620
Query: 547 YDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIM 606
D+++Y P+ I +L A LV ++ + A ++AYD + R + G + +GIM
Sbjct: 621 IDLIEY-PDFISNTILNAVGQILVVDSLDVAREIAYDEVAKTRM--ITRRGDDVRTNGIM 677
Query: 607 SGGSLDLARKAKRWDDKEMGNLKAQKEK-------LSEELREAMKKSRKESELN----TV 655
+GG D K + M + Q E L+ EL+ S+K +LN T
Sbjct: 678 TGGYNDPGNKPALIALEPMYARRPQIEAQQRELDALNRELQLTEASSQKCRDLNNQLATA 737
Query: 656 QSTIKGLEIRLNYSR-----QDLQNTKSQIAKLEAEIDALNARADATEPKIKAIEASMTA 710
+ ++ +N S +DL+ + K +AEI+A E KIK +E+
Sbjct: 738 MRKLAQVKTNINNSEFGIVVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNK 797
Query: 711 RGDTISRKKEEMNSV 725
++ ++K+E+ ++
Sbjct: 798 DKNSQEKRKKELTAL 812
>sp|Q9SN90|SMC22_ARATH Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis
thaliana GN=SMC2-2 PE=2 SV=1
Length = 1171
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 117/534 (21%), Positives = 231/534 (43%), Gaps = 94/534 (17%)
Query: 340 LQQLDT----INREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQN 395
L+QL+T +E K + +L ++ + V +NE+ +++++E ++ D L Q
Sbjct: 414 LKQLNTKISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKRAFDSLPYKEGQM 473
Query: 396 EASLKDNKKLKEELNSDVGSS-KNRVQELQKELEQVIEELGDAKTDKHEDTRRKKKQELV 454
EA KD E ++G K++V EL +L V + T R + V
Sbjct: 474 EALEKDR-----ESELEIGHRLKDKVHELSAQLANV------------QFTYR----DPV 512
Query: 455 ENFKKA-YSGVYDRMINMCHPVHKRYNVAITKVL-GKYMEAIVVDSEKTARLCIQYLKDH 512
+NF ++ GV ++I V+ R ++ +V G + ++VD+E T + +Q K
Sbjct: 513 KNFDRSKVKGVVAKLIK----VNDRSSMTALEVTAGGKLFNVIVDTEDTGKQLLQ--KGD 566
Query: 513 QLDPETFLPIDYLQTKPLKERLRNIRDPK-NVKLLYDVLKYQPEDIKRVVLFATNNALVC 571
T +P++ +Q+ + R++ K N +L ++ Y E++K + + + VC
Sbjct: 567 LRRRVTIIPLNKIQSHLVPPRVQQATVGKGNAELALSLVGY-SEELKNAMEYVFGSTFVC 625
Query: 572 ETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSL----DLARKAKRWDDKEMGN 627
+T + A +VA++ E R +V L+G +Q SG+++GGS DL R+ + E
Sbjct: 626 KTTDAAKEVAFNREI--RTPSVTLEGDVFQPSGLLTGGSRKGGGDLLRQLHDLAEAET-K 682
Query: 628 LKAQKEKLSEELREAMKKSRKESELNTVQSTIKGLEIRLNYSRQDL-----QNTKSQIAK 682
+A ++ LSE EA K EL +Q+ ++ +L D+ + +++ K
Sbjct: 683 FRAHQKSLSE--IEANIK-----ELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQNEHHK 735
Query: 683 LEAEIDALNARADATEPKIKAIEASMTARGDTISRKKEEMNSVEDIVFRDFCKSIGVSTI 742
L + L + +IK E + DT+S ++ S++D
Sbjct: 736 LGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEK---SIKD--------------- 777
Query: 743 RQYEEAELRSQQERQKICQDKDTKKNVARWERAVSDDEEELARAQGAEEKLAGEMRAEAD 802
++ + + KD +KN+ + + ++L + E+L E A
Sbjct: 778 -----------HDKNREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQ 826
Query: 803 KLENMRATRLTKKQAVDAMDEEIGKARREVGSIAKD----------IQAAQKSC 846
+ +++ + + + + ++G R +V +I KD I A K C
Sbjct: 827 EQSYLKSQLTSLRTQISTLASDVGNQRAKVDAIQKDHDQSLSELKLIHAKMKEC 880
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 997 YHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSL 1050
+ PAP ++LDE+DAALD ++ + I + S Q IV+SLKE FS+AD L
Sbjct: 1099 FKPAPIYILDEVDAALDLSHTQNIGRMIKSHFPHS-QFIVVSLKEGMFSNADVL 1151
>sp|Q8IED2|SMC2_PLAF7 Structural maintenance of chromosomes protein 2 OS=Plasmodium
falciparum (isolate 3D7) GN=MAL13P1.96 PE=3 SV=1
Length = 1218
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 536 NIRDPKNVKLLYDVLKYQPEDIKRVVLFATNNALVCETPEDAMKVAYDIEPQHRYDAVAL 595
NI+D +V D+++Y ++++R++ + N L+C + K+ Y+ + Y + L
Sbjct: 611 NIKDKNDVIYFLDIMEYD-KNLERIIQYLFNGTLICSNVDLCKKITYNPNKKLSYTTITL 669
Query: 596 DGTFYQKSGIMSGGS 610
+G + SG MSGGS
Sbjct: 670 EGDKFDTSGSMSGGS 684
>sp|O42649|SMC3_SCHPO Structural maintenance of chromosomes protein 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=psm3 PE=1 SV=1
Length = 1194
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 30/322 (9%)
Query: 339 ILQQLDTINREQKGDQDKLDNELRQQVQTQNEIKKKRHEMEEAQKRIDKLEDHIRQNEAS 398
I QL INR ++ D + + +NE+K K +E + ++ D + Q A+
Sbjct: 395 IRNQLLQINRNINSTKENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLAN 454
Query: 399 LKDNKKLKEELNSDVGSSKNRVQELQKELEQVIEELGDAK------TDKHEDTRRKKKQE 452
+ + KE L S +L+ +E V ++L ++ D++ + ++
Sbjct: 455 ITSINERKENLTDKRKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNTSNGIRAVKD 514
Query: 453 LVENFKKAYSGVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDH 512
+ E K G Y + + V R+ VA+ G + IVVD+++TA + +
Sbjct: 515 IAERLK--LEGYYGPLCEL-FKVDNRFKVAVEATAGNSLFHIVVDNDETATQILDVIYKE 571
Query: 513 QLDPETFLPIDYLQTKPLKERLRNIRDPKNVKLLYDVLKYQPE---DIKRVVLFATNNAL 569
TF+P++ L+ K + D + L L++ P+ IK+V + +
Sbjct: 572 NAGRVTFMPLNKLRPKAV-----TYPDASDALPLIQYLEFDPKFDAAIKQVF----SKTI 622
Query: 570 VCETPEDAMKVAYDIEPQHRYDAVALDGTFYQKSGIMSGGSLDLARKAKRWDDKEMGNLK 629
VC + E A + A H+ + + L G K G ++ G D + R D + N+K
Sbjct: 623 VCPSIETASQYA----RSHQLNGITLSGDRSDKKGALTAGYRDY--RNSRLD--AIKNVK 674
Query: 630 AQKEKLSEELREAMKKSRKESE 651
+ K S +L+E+++K R E E
Sbjct: 675 TYQIKFS-DLQESLEKCRSEIE 695
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 995 HRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLVGI 1053
R PAPF +LDE DA LD +A+ + ++ S Q I + + E AD+ G+
Sbjct: 1114 QRCDPAPFNILDECDANLDAQYRSAIAAMVKEMSKTS-QFICTTFRPEMVKVADNFYGV 1171
>sp|Q54PK4|SMC2_DICDI Structural maintenance of chromosomes protein 2 OS=Dictyostelium
discoideum GN=smc2 PE=3 SV=1
Length = 1184
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 997 YHPAPFFVLDEIDAALD---NTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLV 1051
+ PAP ++LDEIDAALD NIG + T S Q IV+SLKE F++A+ L
Sbjct: 1104 FKPAPMYILDEIDAALDLSHTQNIGMMLKQHFT----SSQFIVVSLKEGMFTNANVLF 1157
>sp|P50533|SMC2_XENLA Structural maintenance of chromosomes protein 2 OS=Xenopus laevis
GN=smc2 PE=1 SV=1
Length = 1203
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 904 NLRAMEKLEHAKE---NLMKTNEEFENARKRAKKAKANFDRIKKER----YDKFTRCFEH 956
N+RAM L A+E +LMK EN + + D+ K E + K + F
Sbjct: 985 NMRAMNMLTQAEERYNDLMKRKRIVENDKSKILTTIEELDQKKNEALNIAWQKVNKDFGS 1044
Query: 957 V-SNEIDGAGS-------ESVLP----RPFLGPENPEEPLT---------YRVSTTIVSH 995
+ S + GA + +SVL + LG +E LT +S +
Sbjct: 1045 IFSTLLPGANAMLAPPEGQSVLDGLEFKVALG-NTWKENLTELSGGQRSLVALSLILAML 1103
Query: 996 RYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHADSLV 1051
+ PAP ++LDE+DAALD ++ + + T + S Q IV+SLK+ F++A+ L
Sbjct: 1104 LFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFRHS-QFIVVSLKDGMFNNANVLF 1158
>sp|Q9HK21|SMC_THEAC Chromosome partition protein Smc OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=smc PE=3 SV=1
Length = 1140
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 976 GPENPEEPLTYRVSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTI 1035
G E L++ + I+ P+ + LDE+D LD N + ++++ QTI
Sbjct: 1046 GGEKSVAALSFITAVQIL----MPSSIYFLDEVDMYLDAYNAENMIK-MISQNAGEAQTI 1100
Query: 1036 VISLKEEFFSHADSLVGICPGSVTISSICF-GHY 1068
VISLK FS+A + +G+ SV S F GH+
Sbjct: 1101 VISLKSLVFSYASNAIGVT--SVNGESFVFNGHF 1132
Score = 37.7 bits (86), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 1 MSPILQYIEVDNFKSYKGKFSIGPLKKFTAVIGPNGSG 38
MS ++ IE NFKS++ K I K + GPNGSG
Sbjct: 1 MSSYIERIEAHNFKSFRRKKVINFTKGLNVISGPNGSG 38
>sp|Q552D9|SMC3_DICDI Structural maintenance of chromosome protein 3 OS=Dictyostelium
discoideum GN=smc3 PE=3 SV=1
Length = 1437
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 463 GVYDRMINMCHPVHKRYNVAITKVLGKYMEAIVVDSEKTARLCIQYLKDHQLDPETFLPI 522
G++ ++ + V +A+ V G + +VVD++ TA ++ L + +F+P+
Sbjct: 523 GIHGPLVELFDIVEPEATLALEVVGGNGLFHVVVDTDDTASKILEILNTENIGRLSFIPL 582
Query: 523 DYLQTKPLKERLRNIRDPKNVKLLYDVLKYQP---EDIKRVVLFATNNALVCETPEDAMK 579
+ ++TKP K I + V L V+ + P E +K V L+C+ A +
Sbjct: 583 NRVRTKPPK---FPILENDLVCPLIKVISFDPIYTEAMKLVF----GKTLICKDEATAEQ 635
Query: 580 VAYDIEPQHRYDAVALDGTFYQKSGIMSGG 609
V D + +G + G ++GG
Sbjct: 636 V----RKSSHVDCITFEGDVFHSKGAVTGG 661
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 995 HRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHAD 1048
R PAPF++LDEIDAALD+ N S ++ K +Q I + EF A+
Sbjct: 1115 QRTDPAPFYLLDEIDAALDH-NYRVAVSKMIRKHSREIQFIATTFGPEFVMDAN 1167
>sp|Q8KBS6|SMC_CHLTE Chromosome partition protein Smc OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=smc PE=3 SV=1
Length = 1183
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 988 VSTTIVSHRYHPAPFFVLDEIDAALDNTNIGKVASYIVTKTQDSLQTIVISLKEEFFSHA 1047
+S + P+PF +LDE+DA LD+ N+G+ ++ K +++ Q I+++ ++ +
Sbjct: 1094 LSLLFAIYLVKPSPFCILDEVDAPLDDANVGRFIK-LLKKFENNTQFIIVTHNKKSMASC 1152
Query: 1048 DSLVGI 1053
+L G+
Sbjct: 1153 QALYGV 1158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 367,065,450
Number of Sequences: 539616
Number of extensions: 15902506
Number of successful extensions: 135465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 4766
Number of HSP's that attempted gapping in prelim test: 85303
Number of HSP's gapped (non-prelim): 28990
length of query: 1070
length of database: 191,569,459
effective HSP length: 128
effective length of query: 942
effective length of database: 122,498,611
effective search space: 115393691562
effective search space used: 115393691562
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)