BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16119
(151 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BKK|A Chain A, Tesis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaf
pdb|3BKL|A Chain A, Testis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaw
pdb|3L3N|A Chain A, Testis Ace Co-Crystal Structure With Novel Inhibitor Lisw
Length = 591
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 484 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 536
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ ++ A+A+ YF+PL DWL EN GE +GW
Sbjct: 537 PWPEAMQLITGQPQMSASAMLSYFKPLLDWLRTENELHGEKLGW 580
>pdb|2IUX|A Chain A, Human Tace Mutant G1234
Length = 591
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 484 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 536
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ ++ A+A+ YF+PL DWL EN GE +GW
Sbjct: 537 PWPEAMQLITGQPQMSASAMLSYFKPLLDWLRTENELHGEKLGW 580
>pdb|2IUL|A Chain A, Human Tace G13 Mutant
Length = 591
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 484 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 536
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ ++ A+A+ YF+PL DWL EN GE +GW
Sbjct: 537 PWPEAMQLITGQPQMSASAMLSYFKPLLDWLRTENELHGEKLGW 580
>pdb|2OC2|A Chain A, Structure Of Testis Ace With Rxpa380
Length = 591
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 484 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 536
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ + A+A+ YF+PL DWL EN GE +GW
Sbjct: 537 PWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGW 580
>pdb|1O8A|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
(Native).
pdb|1UZF|A Chain A, Complex Of The Anti-Hypertensive Drug Captopril An The
Human Testicular Angiotensin I-Converting Enzyme
pdb|4APH|A Chain A, Human Angiotensin-Converting Enzyme In Complex With
Angiotensin-Ii
pdb|4APJ|A Chain A, Human Angiotensin-Converting Enzyme In Complex With Bppb
pdb|1O86|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
In Complex With Lisinopril.
pdb|1UZE|A Chain A, Complex Of The Anti-hypertensive Drug Enalaprilat And The
Human Testicular Angiotensin I-converting Enzyme
Length = 589
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 484 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 536
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ + A+A+ YF+PL DWL EN GE +GW
Sbjct: 537 PWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGW 580
>pdb|2YDM|A Chain A, Structural Characterization Of Angiotensin-I Converting
Enzyme In Complex With A Selenium Analogue Of Captopril
Length = 589
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 484 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 536
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ + A+A+ YF+PL DWL EN GE +GW
Sbjct: 537 PWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGW 580
>pdb|2XY9|A Chain A, Human Angiotensin Converting Enzyme In Complex With
Phosphinic Tripeptide
Length = 585
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS I+QFQ HEALC+A+G + PL KCDIY+SKEAG L M+ G S
Sbjct: 481 YIRYFVSFIIQFQFHEALCQAAGH-------TGPLHKCDIYQSKEAGQRLATAMKLGFSR 533
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW EA+ TG+ + A+A+ YF+PL DWL EN GE +GW
Sbjct: 534 PWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGW 577
>pdb|2C6N|A Chain A, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain With Lisinopril
pdb|2C6N|B Chain B, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain With Lisinopril
pdb|2C6F|A Chain A, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain
pdb|2C6F|B Chain B, Structure Of Human Somatic Angiontensin-I Converting
Enzyme N Domain
Length = 612
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS +LQFQ HEALCK +G PL +CDIYRS +AG L ++Q GSS
Sbjct: 498 YIRYFVSFVLQFQFHEALCKEAG-------YEGPLHQCDIYRSTKAGAKLRKVLQAGSSR 550
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW E L G LDA L +YF+P+ WL +N + GE +GW
Sbjct: 551 PWQEVLKDMVGLDALDAQPLLKYFQPVTQWLQEQNQQNGEVLGW 594
>pdb|3NXQ|A Chain A, Angiotensin Converting Enzyme N Domain Glycsoylation
Mutant (Ndom389) In Complex With Rxp407
pdb|3NXQ|B Chain B, Angiotensin Converting Enzyme N Domain Glycsoylation
Mutant (Ndom389) In Complex With Rxp407
Length = 629
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS +LQFQ HEALCK +G PL +CDIYRS +AG L +++ GSS
Sbjct: 498 YIRYFVSFVLQFQFHEALCKEAG-------YEGPLHQCDIYRSTKAGAKLRKVLRAGSSR 550
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW E L G LDA L +YF+ + WL +N + GE +GW
Sbjct: 551 PWQEVLKDMVGLDALDAQPLLKYFQLVTQWLQEQNQQNGEVLGW 594
>pdb|2XYD|A Chain A, Human Angiotenisn Converting Enzyme N-Domain In Complex
With Phosphinic Tripeptide
pdb|2XYD|B Chain B, Human Angiotenisn Converting Enzyme N-Domain In Complex
With Phosphinic Tripeptide
Length = 610
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
YIRY+VS +LQFQ HEALCK +G PL +CDIYRS +AG L +++ GSS
Sbjct: 498 YIRYFVSFVLQFQFHEALCKEAG-------YEGPLHQCDIYRSTKAGAKLRKVLRAGSSR 550
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
PW E L G LDA L +YF+ + WL +N + GE +GW
Sbjct: 551 PWQEVLKDMVGLDALDAQPLLKYFQLVTQWLQEQNQQNGEVLGW 594
>pdb|2X92|A Chain A, Crystal Structure Of Ance-Ramiprilat Complex
pdb|2X93|A Chain A, Crystal Structure Of Ance-Trandolaprilat Complex
pdb|2X94|A Chain A, Crystal Structure Of Ance-Perindoprilat Complex
pdb|2X95|A Chain A, Crystal Structure Of Ance-Lisinopril-Tryptophan Analogue,
Lisw-S Complex
Length = 599
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 1 MEYIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGS 60
+EY+RY VS I+QFQ +++ C +GQY D+ PL CDIY S AG ++M+ G+
Sbjct: 486 VEYLRYLVSFIIQFQFYKSACIKAGQYDPDN-VELPLDNCDIYGSAAAGAAFHNMLSMGA 544
Query: 61 SVPWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWT 107
S PW +AL GE + A+ EYF PL WL AEN++ +GWT
Sbjct: 545 SKPWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAENIKNNVHIGWT 591
>pdb|2X8Y|A Chain A, Crystal Structure Of Ance
pdb|2X8Z|A Chain A, Crystal Structure Of Ance-Captopril Complex
pdb|2X90|A Chain A, Crystal Structure Of Ance-Enalaprilat Complex
pdb|2X91|A Chain A, Crystal Structure Of Ance-Lisinopril Complex
pdb|2X96|A Chain A, Crystal Structure Of Ance-Rxpa380 Complex
pdb|2X97|A Chain A, Crystal Structure Of Ance-Rxp407 Complex
pdb|2XHM|A Chain A, Crystal Structure Of Ance-K26 Complex
pdb|3ZQZ|A Chain A, Crystal Structure Of Ance In Complex With A Selenium
Analogue Of Captopril
pdb|4AA1|A Chain A, Crystal Structure Of Ance In Complex With Angiotensin-Ii
pdb|4AA2|A Chain A, Crystal Structure Of Ance In Complex With Bradykinin
Potentiating Peptide B
pdb|4ASQ|A Chain A, Crystal Structure Of Ance In Complex With Bradykinin
pdb|4ASR|A Chain A, Crystal Structure Of Ance In Complex With Thr6-Bradykinin
Length = 598
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 1 MEYIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGS 60
+EY+RY VS I+QFQ +++ C +GQY D+ PL CDIY S AG ++M+ G+
Sbjct: 486 VEYLRYLVSFIIQFQFYKSACIKAGQYDPDN-VELPLDNCDIYGSAAAGAAFHNMLSMGA 544
Query: 61 SVPWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWT 107
S PW +AL GE + A+ EYF PL WL AEN++ +GWT
Sbjct: 545 SKPWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAENIKNNVHIGWT 591
>pdb|1J36|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J36|B Chain B, Crystal Structure Of Drosophila Ance
pdb|1J37|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J37|B Chain B, Crystal Structure Of Drosophila Ance
pdb|1J38|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J38|B Chain B, Crystal Structure Of Drosophila Ance
Length = 607
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 1 MEYIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGS 60
+EY+RY VS I+QFQ +++ C +GQY D+ PL CDIY S AG ++M+ G+
Sbjct: 489 VEYLRYLVSFIIQFQFYKSACIKAGQYDPDN-VELPLDNCDIYGSARAGAAFHNMLSMGA 547
Query: 61 SVPWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
S PW +AL GE + A+ EYF PL WL AEN++ +GW
Sbjct: 548 SKPWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAENIKNNVHIGW 593
>pdb|1R42|A Chain A, Native Human Angiotensin Converting Enzyme-related
Carboxypeptidase (ace2)
pdb|1R4L|A Chain A, Inhibitor Bound Human Angiotensin Converting
Enzyme-Related Carboxypeptidase (Ace2)
Length = 615
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+IRYY + QFQ EALC+A+ PL KCDI S EAG L +M++ G S
Sbjct: 512 FIRYYTRTLYQFQFQEALCQAAKH-------EGPLHKCDISNSTEAGQKLFNMLRLGKSE 564
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYD 109
PW AL G ++ L YF PL WL +N FVGW+ D
Sbjct: 565 PWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTD 609
>pdb|3SCK|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human-Civet Chimeric Receptor Ace2
pdb|3SCK|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human-Civet Chimeric Receptor Ace2
pdb|3SCL|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From Sars Coronavirus Epidemic Strain Complexed With
Human-Civet Chimeric Receptor Ace2
pdb|3SCL|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From Sars Coronavirus Epidemic Strain Complexed With
Human-Civet Chimeric Receptor Ace2
Length = 603
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+IRYY + QFQ EALC+A+ PL KCDI S EAG L +M++ G S
Sbjct: 494 FIRYYTRTLYQFQFQEALCQAAKH-------EGPLHKCDISNSTEAGQKLFNMLRLGKSE 546
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYD 109
PW AL G ++ L YF PL WL +N FVGW+ D
Sbjct: 547 PWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTD 591
>pdb|3D0G|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Human Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0G|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Human Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0H|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0H|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2002-2003 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0I|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2005-2006 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
pdb|3D0I|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From The 2005-2006 Sars Coronavirus Civet Strain
Complexed With Human-Civet Chimeric Receptor Ace2
Length = 597
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+IRYY + QFQ EALC+A+ PL KCDI S EAG L +M++ G S
Sbjct: 494 FIRYYTRTLYQFQFQEALCQAAKH-------EGPLHKCDISNSTEAGQKLFNMLRLGKSE 546
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYD 109
PW AL G ++ L YF PL WL +N FVGW+ D
Sbjct: 547 PWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTD 591
>pdb|2AJF|A Chain A, Structure Of Sars Coronavirus Spike Receptor-Binding
Domain Complexed With Its Receptor
pdb|2AJF|B Chain B, Structure Of Sars Coronavirus Spike Receptor-Binding
Domain Complexed With Its Receptor
pdb|3KBH|A Chain A, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
pdb|3KBH|B Chain B, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
pdb|3KBH|C Chain C, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
pdb|3KBH|D Chain D, Crystal Structure Of Nl63 Respiratory Coronavirus
Receptor-Binding Domain Complexed With Its Human
Receptor
Length = 597
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+IRYY + QFQ EALC+A+ PL KCDI S EAG L +M++ G S
Sbjct: 494 FIRYYTRTLYQFQFQEALCQAAKH-------EGPLHKCDISNSTEAGQKLFNMLRLGKSE 546
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYD 109
PW AL G ++ L YF PL WL +N FVGW+ D
Sbjct: 547 PWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTD 591
>pdb|3SCI|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Human Strain Complexed
With Human Receptor Ace2
pdb|3SCI|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Human Strain Complexed
With Human Receptor Ace2
pdb|3SCJ|A Chain A, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human Receptor Ace2
pdb|3SCJ|B Chain B, Crystal Structure Of Spike Protein Receptor-Binding Domain
From A Predicted Sars Coronavirus Civet Strain Complexed
With Human Receptor Ace2
Length = 603
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+IRYY + QFQ EALC+A+ PL KCDI S EAG L +M++ G S
Sbjct: 494 FIRYYTRTLYQFQFQEALCQAAKH-------EGPLHKCDISNSTEAGQKLFNMLRLGKSE 546
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYD 109
PW AL G ++ L YF PL WL +N FVGW+ D
Sbjct: 547 PWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTD 591
>pdb|4B6G|A Chain A, The Crystal Structure Of The Neisserial Esterase D.
pdb|4B6G|B Chain B, The Crystal Structure Of The Neisserial Esterase D
Length = 283
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 21/84 (25%)
Query: 60 SSVPWNEALFTA-TGESR-----LDANALREYF---------RPLEDWLVAENLRTGEFV 104
S VPW E FTA G+ R DAN+L + + LED + LRT +F+
Sbjct: 183 SLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFI 242
Query: 105 GWTYDGDYCKYSIQTANLQVSGGY 128
+ C+ + Q +++ GY
Sbjct: 243 ------ETCRAANQPVDVRFHKGY 260
>pdb|2AAZ|A Chain A, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|B Chain B, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|C Chain C, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|D Chain D, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|E Chain E, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|F Chain F, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|G Chain G, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|H Chain H, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|I Chain I, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|J Chain J, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|K Chain K, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|L Chain L, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|M Chain M, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|N Chain N, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|O Chain O, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
pdb|2AAZ|P Chain P, Cryptococcus Neoformans Thymidylate Synthase Complexed
With Substrate And An Antifolate
Length = 317
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 29 ADDPSSKPLFKCDIY-RSKEAGV----------LLNHMMQFGSSVPWNEALFTATGESRL 77
AD P SKP C +Y RS + G+ LL HM+ + +E +
Sbjct: 200 ADSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMG----- 254
Query: 78 DANALREYFRPLEDWLVAE 96
DA+ R++ PL+ L E
Sbjct: 255 DAHVYRDHVEPLKTQLERE 273
>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The
Ldl Receptor
Length = 791
Score = 26.9 bits (58), Expect = 4.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 58 FGSSVPW----NEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW----TYD 109
F V W NEA+F+A + D N L E ED ++ NL V W T
Sbjct: 611 FEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLS 670
Query: 110 GDYCKY 115
C+Y
Sbjct: 671 NGGCQY 676
>pdb|1IJQ|A Chain A, Crystal Structure Of The Ldl Receptor Ywtd-Egf Domain Pair
pdb|1IJQ|B Chain B, Crystal Structure Of The Ldl Receptor Ywtd-Egf Domain Pair
Length = 316
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 65 NEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW----TYDGDYCKY 115
NEA+F+A + D N L E ED ++ NL V W T C+Y
Sbjct: 228 NEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQY 282
>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE
RECEPTOR IN AN Extended Conformation
Length = 400
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 65 NEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
NEA+F+A + D N L E ED ++ NL V W
Sbjct: 310 NEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNW 351
>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE
RECEPTOR IN AN Extended Conformation
Length = 440
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 65 NEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGW 106
NEA+F+A + D N L E ED ++ NL V W
Sbjct: 350 NEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNW 391
>pdb|2QMC|B Chain B, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase T380a Mutant
pdb|2QMC|D Chain D, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase T380a Mutant
Length = 188
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 48 AGVLLNHMMQFGSSVPWNEALFTATGESRLDANALREYFRPL 89
AG LLN+ M S P N L+ G DANA+ RPL
Sbjct: 33 AGFLLNNEMDDFSIKPGNPNLYGLVGG---DANAIEANKRPL 71
>pdb|2NQO|B Chain B, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase
pdb|2NQO|D Chain D, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase
pdb|2QM6|B Chain B, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase In Complex With Glutamate
pdb|2QM6|D Chain D, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase In Complex With Glutamate
pdb|3FNM|B Chain B, Crystal Structure Of Acivicin-Inhibited
Gamma-Glutamyltranspeptidase Reveals Critical Roles For
Its C-Terminus In Autoprocessing And Catalysis
pdb|3FNM|D Chain D, Crystal Structure Of Acivicin-Inhibited
Gamma-Glutamyltranspeptidase Reveals Critical Roles For
Its C-Terminus In Autoprocessing And Catalysis
Length = 188
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 48 AGVLLNHMMQFGSSVPWNEALFTATGESRLDANALREYFRPL 89
AG LLN+ M S P N L+ G DANA+ RPL
Sbjct: 33 AGFLLNNEMDDFSIKPGNPNLYGLVGG---DANAIEANKRPL 71
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1IVS|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1IVS|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1IYW|A Chain A, Preliminary Structure Of Thermus Thermophilus Ligand-Free
Valyl-Trna Synthetase
pdb|1IYW|B Chain B, Preliminary Structure Of Thermus Thermophilus Ligand-Free
Valyl-Trna Synthetase
Length = 862
Score = 26.2 bits (56), Expect = 7.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 18 EALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSVPWNEALFT 70
E L G+ R D K L + ++ + G +L + + G+S W+ FT
Sbjct: 92 ERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFT 144
>pdb|2Y8K|A Chain A, Structure Of Ctgh5-Cbm6, An Arabinoxylan-Specific Xylanase
Length = 491
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 45 SKEAGVLLNHMMQFGSSVPWNEALFTATGESRLDANALR--EYFRPLEDWLVAENLRTGE 102
++E +N+ + + + + + G S D +++ +RP E + + TG
Sbjct: 326 ARETATWINNFLTGTTRIEAEDFDWGGNGVSYYDTDSVNVGGQYRPDEGVDIEKTSDTGG 385
Query: 103 F--VGWTYDGDYCKYSIQTANLQVSGGYYN 130
VGW +G++ +Y+I+ N GYYN
Sbjct: 386 GYNVGWISEGEWLEYTIRVRNP----GYYN 411
>pdb|1Q87|A Chain A, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Tetragonal Form)
pdb|1Q87|B Chain B, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Tetragonal Form)
pdb|1Q88|A Chain A, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Monoclinic Form)
pdb|1Q88|B Chain B, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Monoclinic Form)
pdb|1Q89|A Chain A, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Cubic Crystal Form)
Length = 221
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Query: 64 WNEALFTATGESRLDANALR-----EYF--RPLEDWLVA 95
WN+ L ATG+ +D N + +YF +P+E +L A
Sbjct: 170 WNKPLIEATGQYLMDENGEKYDSWDKYFEMKPIETYLTA 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,549,996
Number of Sequences: 62578
Number of extensions: 175505
Number of successful extensions: 367
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 326
Number of HSP's gapped (non-prelim): 30
length of query: 151
length of database: 14,973,337
effective HSP length: 90
effective length of query: 61
effective length of database: 9,341,317
effective search space: 569820337
effective search space used: 569820337
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)