RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16119
(151 letters)
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc
metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A
{Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A*
2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A*
2x95_A* 1j36_A* 1j37_A* 1j38_A
Length = 598
Score = 134 bits (337), Expect = 1e-37
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 2 EYIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSS 61
EY+RY VS I+QFQ +++ C +GQY D+ PL CDIY S AG ++M+ G+S
Sbjct: 487 EYLRYLVSFIIQFQFYKSACIKAGQYDPDNVE-LPLDNCDIYGSAAAGAAFHNMLSMGAS 545
Query: 62 VPWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYDG 110
PW +AL GE + A+ EYF PL WL AEN++ +GWT
Sbjct: 546 KPWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAENIKNNVHIGWTTSN 594
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor,
enalaprilat, zinc dependant peptidase, anti-hypertensive
drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB:
1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A*
2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Length = 589
Score = 130 bits (327), Expect = 2e-36
Identities = 55/115 (47%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 2 EYIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSS 61
YIRY+VS I+QFQ HEALC+A+G PL KCDIY+SKEAG L M+ G S
Sbjct: 483 PYIRYFVSFIIQFQFHEALCQAAGHT-------GPLHKCDIYQSKEAGQRLATAMKLGFS 535
Query: 62 VPWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYDGDYCKYS 116
PW EA+ TG+ + A+A+ YF+PL DWL EN GE +GW ++ S
Sbjct: 536 RPWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGWP-QYNWTPNS 589
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na
open conformation, chloride ION binding site; HET: NAG;
2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A
3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A
3scl_A
Length = 615
Score = 123 bits (309), Expect = 1e-33
Identities = 44/108 (40%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+IRYY + QFQ EALC+A+ PL KCDI S EAG L +M++ G S
Sbjct: 512 FIRYYTRTLYQFQFQEALCQAAKHE-------GPLHKCDISNSTEAGQKLFNMLRLGKSE 564
Query: 63 PWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWTYDG 110
PW AL G ++ L YF PL WL +N FVGW+ D
Sbjct: 565 PWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQN--KNSFVGWSTDW 610
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase,
hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4
NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A*
2c6n_A* 2c6f_A*
Length = 629
Score = 122 bits (307), Expect = 2e-33
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 2 EYIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSS 61
YIRY+VS +LQFQ HEALCK +G PL +CDIYRS +AG L +++ GSS
Sbjct: 497 PYIRYFVSFVLQFQFHEALCKEAGYE-------GPLHQCDIYRSTKAGAKLRKVLRAGSS 549
Query: 62 VPWNEALFTATGESRLDANALREYFRPLEDWLVAENLRTGEFVGWT 107
PW E L G LDA L +YF+ + WL +N + GE +GW
Sbjct: 550 RPWQEVLKDMVGLDALDAQPLLKYFQLVTQWLQEQNQQNGEVLGWP 595
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase;
2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A
1ka4_A
Length = 499
Score = 35.2 bits (80), Expect = 0.005
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+ Y + +L Q++ + K + + K + K L + ++GS
Sbjct: 420 FPTYTIGTLLSAQLYYHIKKDIPDFEEK------VAKAEFDPIKAW--LREKIHRWGSIY 471
Query: 63 PWNEALFTATGESRLDANALREYFR 87
P E L A GE +DA + +
Sbjct: 472 PPKELLKKAIGED-MDAEYFVRWVK 495
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of
metallocarboxypept carboxypeptidase, hydrolase; 2.10A
{Trypanosoma cruzi}
Length = 505
Score = 34.9 bits (79), Expect = 0.007
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+ Y + ++ Q+ + + G+ DD K K + Q GSS+
Sbjct: 420 FPTYSLGAMVAAQLMSCVRRELGEEVVDDCIRKGDL------GKILAKQNEKIWQHGSSL 473
Query: 63 PWNEALFTATGESRLDANALREYFR 87
+E L ATGE+ L+ R +
Sbjct: 474 TTDELLRQATGET-LNPEHYRRHLE 497
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding,
metalloprotease, protease, zinc; 2.90A {Bacillus
subtilis}
Length = 501
Score = 32.1 bits (72), Expect = 0.063
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 51 LLNHMMQFGSSVPWNEALFTATGESRLDANALREYFR 87
L + G + + ATGE L+ L +Y
Sbjct: 457 LTEKVHIHGKRKKPLDIIKDATGEE-LNVRYLIDYLS 492
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase;
2.10A {Thermus thermophilus HB27} PDB: 1wgz_A
Length = 509
Score = 29.8 bits (66), Expect = 0.31
Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 9/85 (10%)
Query: 3 YIRYYVSNILQFQIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSSV 62
+ Y + N+ Q + + +P F + + GS
Sbjct: 427 FPTYTLGNLYAAQFFQKAEA-------ELGPLEPRFARGEF-QPFLDWTRARIHAEGSRF 478
Query: 63 PWNEALFTATGESRLDANALREYFR 87
+ TGE+ A Y
Sbjct: 479 RPRVLVERVTGEA-PSARPFLAYLE 502
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.1 bits (64), Expect = 0.77
Identities = 19/150 (12%), Positives = 52/150 (34%), Gaps = 35/150 (23%)
Query: 3 YIRYYVSNILQF-QIHEALCKASGQYRADDPSSKPLFKCDIYRSKEAGVLLNHMMQFGSS 61
+ +Y VS + + ++ +AL + +P VL++ ++ G +
Sbjct: 126 FAKYNVSRLQPYLKLRQALLEL-----------RP----------AKNVLIDGVLGSGKT 164
Query: 62 VPWNEALFTATGESRLDANA----LREYFRPLEDWLVAENLRTGEFVGWTYDGDYCKYSI 117
+ + + ++D L+ P + + L D ++ S
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY------QIDPNWTSRSD 218
Query: 118 QTANLQVSGGYYNAAPSTFSSPLKKKKKKK 147
++N+++ ++ + LK K +
Sbjct: 219 HSSNIKLR---IHSIQAELRRLLKSKPYEN 245
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1,
4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP:
b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Length = 131
Score = 27.2 bits (60), Expect = 1.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 101 GEFVGWTYDGDYCKYSIQTANLQVSGGY 128
G+ VG+ GD+ Y+ N+ SG Y
Sbjct: 28 GKNVGYIDAGDWLSYAGTPVNIPSSGSY 55
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL
AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Length = 160
Score = 26.9 bits (59), Expect = 2.2
Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Query: 101 GEFVGWTYDGDYCKYSIQTANLQVSGGY 128
+ + GDY Y+I + +G Y
Sbjct: 57 NTAINYVNQGDYADYTI---AVAQAGNY 81
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 27.0 bits (59), Expect = 3.1
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 88 PLEDWLVAENLRTGEFVGWTYDG 110
PL+ L + GE YD
Sbjct: 38 PLDQDLREYIIHYGEMAQAGYDT 60
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase,
family 9, cellobiohydrolase; 2.1A {Clostridium
thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Length = 609
Score = 26.9 bits (59), Expect = 3.5
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 84 EYFRPLEDWLVAENLRTGEFVGWTYDGDYCKYSIQTANLQVSGGYYNA 131
++ RP + N W D +Y + V+GG+Y+A
Sbjct: 130 QWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWYDA 177
>3skq_A Mitochondrial distribution and morphology protein; 14-3-3-like
membrane protein, mitochondrial ribosome, respir chain
biogenesis; 2.10A {Saccharomyces cerevisiae}
Length = 249
Score = 25.5 bits (55), Expect = 9.0
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 133 PSTFSSPLKKKKKKKN 148
PST+ S K+ K+
Sbjct: 8 PSTYESGKDKQAKRNK 23
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.133 0.413
Gapped
Lambda K H
0.267 0.0514 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,360,115
Number of extensions: 126966
Number of successful extensions: 244
Number of sequences better than 10.0: 1
Number of HSP's gapped: 238
Number of HSP's successfully gapped: 21
Length of query: 151
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 66
Effective length of database: 4,328,508
Effective search space: 285681528
Effective search space used: 285681528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.7 bits)