Query psy16124
Match_columns 323
No_of_seqs 247 out of 1471
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 21:30:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 8.6E-49 2.9E-53 349.9 12.0 291 20-310 41-494 (510)
2 4amj_A Beta-1 adrenergic recep 100.0 1.3E-47 4.3E-52 322.4 6.9 278 16-301 16-299 (315)
3 2rh1_A Beta-2-adrenergic recep 100.0 8.1E-46 2.8E-50 330.3 17.2 275 18-301 47-475 (500)
4 3uon_A Human M2 muscarinic ace 100.0 4.6E-46 1.6E-50 329.6 14.9 278 17-301 29-456 (467)
5 3vw7_A Proteinase-activated re 100.0 8E-46 2.7E-50 329.5 13.5 282 17-301 26-463 (484)
6 2ks9_A Substance-P receptor; w 100.0 3.1E-44 1.1E-48 307.8 22.7 279 19-306 40-325 (364)
7 1u19_A Rhodopsin; G protein-co 100.0 1.2E-44 4E-49 308.7 19.7 270 19-301 46-322 (349)
8 3eml_A Human adenosine A2A rec 100.0 9.1E-45 3.1E-49 322.9 17.0 294 16-316 26-480 (488)
9 3rze_A Histamine H1 receptor, 100.0 1.2E-45 4.2E-50 325.5 10.4 281 15-303 12-443 (452)
10 3v2y_A Sphingosine 1-phosphate 100.0 5E-44 1.7E-48 320.0 18.8 280 18-307 70-497 (520)
11 4dkl_A MU-type opioid receptor 100.0 5.5E-44 1.9E-48 315.9 16.1 279 17-301 23-454 (464)
12 2z73_A Rhodopsin; visual pigme 100.0 1.6E-43 5.6E-48 311.6 18.9 278 20-303 43-332 (448)
13 4eiy_A Adenosine receptor A2A/ 100.0 3.5E-45 1.2E-49 322.1 8.3 292 17-315 37-438 (447)
14 3pbl_A D(3) dopamine receptor, 100.0 4.1E-44 1.4E-48 318.2 13.8 273 17-301 44-470 (481)
15 3odu_A C-X-C chemokine recepto 100.0 9.9E-44 3.4E-48 317.4 11.6 282 17-301 54-491 (502)
16 2lnl_A C-X-C chemokine recepto 100.0 4.9E-43 1.7E-47 291.9 14.6 266 18-301 18-292 (296)
17 4ea3_A Fusion protein of nocic 100.0 2.1E-42 7.3E-47 303.1 19.3 272 18-302 132-409 (434)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 8.5E-44 2.9E-48 318.4 9.7 277 17-301 188-489 (514)
19 2koe_A Human cannabinoid recep 98.8 3.9E-09 1.3E-13 58.3 2.6 34 268-301 3-36 (40)
20 1hll_A Alpha-2A adrenergic rec 98.7 5.8E-09 2E-13 54.4 1.9 30 96-125 2-31 (32)
21 2ki9_A Cannabinoid receptor 2; 98.0 4.6E-07 1.6E-11 47.2 -0.6 28 221-248 1-28 (33)
22 4ea3_A Fusion protein of nocic 86.3 8.1 0.00028 32.9 11.2 35 277-311 380-414 (434)
23 2ket_A Cathelicidin-6; antimic 81.5 0.65 2.2E-05 20.9 1.1 14 291-304 4-17 (27)
24 2lot_A Apelin receptor; membra 72.5 0.087 3E-06 31.4 -4.0 23 18-40 35-58 (64)
25 2ks9_A Substance-P receptor; w 55.7 17 0.00059 29.7 5.3 32 278-309 293-324 (364)
26 3sn6_R Lysozyme, beta-2 adrene 34.6 13 0.00043 32.5 1.2 38 273-311 458-495 (514)
27 4eiy_A Adenosine receptor A2A/ 26.7 69 0.0024 26.9 4.5 34 279-312 398-431 (447)
28 2rdd_B UPF0092 membrane protei 25.1 45 0.0015 17.0 1.8 16 187-202 13-28 (37)
29 3uon_A Human M2 muscarinic ace 25.0 1.6E+02 0.0055 24.7 6.6 80 224-311 383-462 (467)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=8.6e-49 Score=349.89 Aligned_cols=291 Identities=17% Similarity=0.241 Sum_probs=214.9
Q ss_pred HHHHHHhhcc-eEEEEEeecCCc---chhHHHHHHHHHHHHHHHHHhhhhhHHhhhcc--CcccccccchhHHhHHHHHH
Q psy16124 20 RRQCVDIALD-AQITPWYSAQCP---GEMINYYILSLAMADLLFGLLVVPLSVYPALA--QDWVYGNVICRIVGYIEVTL 93 (323)
Q Consensus 20 ~~~~~gl~~N-~v~~~i~~~~~~---r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~--~~~~~~~~~C~~~~~~~~~~ 93 (323)
.++++|++|| ++++++.+++++ ++++|+|++|||++|++.+++.+|+.+..... +.|.+|+..|++..++..++
T Consensus 41 ~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~~~~~ 120 (510)
T 4grv_A 41 ALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDAC 120 (510)
T ss_dssp HHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHHHHHH
Confidence 3488999999 888888777654 47899999999999999999999998876543 56999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCccc-----CCCceEeeccCC-
Q psy16124 94 WVICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYD-----EDGYICMLDWGG- 167 (323)
Q Consensus 94 ~~~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-----~~~~~C~~~~~~- 167 (323)
..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++.++..... .....|...++.
T Consensus 121 ~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 200 (510)
T 4grv_A 121 TYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDTA 200 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCHH
T ss_pred HHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999998866432222 223457665543
Q ss_pred -ceeehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCC------------------------------C---------
Q psy16124 168 -MAAYTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPP------------------------------I--------- 207 (323)
Q Consensus 168 -~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~------------------------------~--------- 207 (323)
...|..+..++.+++|+++++++|..|++.++++.+... .
T Consensus 201 ~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (510)
T 4grv_A 201 TVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSE 280 (510)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECCCSSSHHHHHHS
T ss_pred hhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccCCCCCCCccccc
Confidence 244556667778899999999999999999875321000 0
Q ss_pred --------------------------------------------------------------------------------
Q psy16124 208 -------------------------------------------------------------------------------- 207 (323)
Q Consensus 208 -------------------------------------------------------------------------------- 207 (323)
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (510)
T 4grv_A 281 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNNKR 360 (510)
T ss_dssp CCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTC
T ss_pred cCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCCCccccccccCC
Confidence
Q ss_pred ---------------Cch---------------hhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Q psy16124 208 ---------------HDK---------------EYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIIS 257 (323)
Q Consensus 208 ---------------~~~---------------~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~ 257 (323)
+.. +..++...++++|++||+++++++|++||+|+++..++..+......
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~ 440 (510)
T 4grv_A 361 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQW 440 (510)
T ss_dssp HHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCC
T ss_pred CcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccC
Confidence 000 00000011235688999999999999999999999998877654311
Q ss_pred -cccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhccccccCCCC
Q psy16124 258 -FIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCISVCCKQKS 310 (323)
Q Consensus 258 -~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~~ 310 (323)
.........+..++.+++++||++||+||+++|++||+++++++++.|++.++
T Consensus 441 ~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~~~r~ 494 (510)
T 4grv_A 441 TTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACLCPGWRH 494 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC--------------
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCC
Confidence 01112234566788899999999999999999999999999999655544333
No 2
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=1.3e-47 Score=322.37 Aligned_cols=278 Identities=24% Similarity=0.369 Sum_probs=223.1
Q ss_pred hHHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHH
Q psy16124 16 LSMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLW 94 (323)
Q Consensus 16 ~~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 94 (323)
......+++|++|| ++++++.+++++|+++|++++|||++|++.++..+|..+.....++|.+++..|++..++..++.
T Consensus 16 ~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 95 (315)
T 4amj_A 16 LLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCV 95 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHHHHHHH
Confidence 34445589999999 88888889999999999999999999999988899988888878889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeecc-----CCce
Q psy16124 95 VICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDW-----GGMA 169 (323)
Q Consensus 95 ~~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~-----~~~~ 169 (323)
.+|.++++++|+|||++|++|++|++..+++++..+++++|+++++.+.++.........+.+...|..+. ....
T Consensus 96 ~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 175 (315)
T 4amj_A 96 TASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNR 175 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCH
T ss_pred HHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcch
Confidence 99999999999999999999999998889999999999999999999988876544333333333444332 2234
Q ss_pred eehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q psy16124 170 AYTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDKEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYE 249 (323)
Q Consensus 170 ~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~ 249 (323)
.|.....+..+++|+++++++|..+++.++++.++.+..+++..++...++++|.++++..++++|++||+|+.+..++.
T Consensus 176 ~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~ 255 (315)
T 4amj_A 176 AYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVN 255 (315)
T ss_dssp HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666678899999999999999999887655443333323333333467899999999999999999999999988
Q ss_pred HHhCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 250 YLSGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
.+...... .....+..++.++|+++||++|+ ++++||+++++++
T Consensus 256 ~~~~~~~~-------~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l 299 (315)
T 4amj_A 256 VFNRDLVP-------DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL 299 (315)
T ss_dssp HHCTTSSC-------HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHH
T ss_pred HhcCccch-------HHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHh
Confidence 87654422 45666778899999999999999 9999999999998
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=8.1e-46 Score=330.27 Aligned_cols=275 Identities=24% Similarity=0.396 Sum_probs=220.2
Q ss_pred HHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHHH
Q psy16124 18 MGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWVI 96 (323)
Q Consensus 18 ~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 96 (323)
+..++++|++|| ++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.+++..|++..++..++..+
T Consensus 47 ~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~ 126 (500)
T 2rh1_A 47 MSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTA 126 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHH
Confidence 334488999999 8888889999999999999999999999999889999888877788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcc-cccCCCcccCCCceEeecc-----CCcee
Q psy16124 97 CNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPL-LDFSDPKYDEDGYICMLDW-----GGMAA 170 (323)
Q Consensus 97 s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~C~~~~-----~~~~~ 170 (323)
|++++++||+|||+||++|++|++.++++++..+++++|++++++++++. ..+... ...+...|...+ .....
T Consensus 127 Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~ 205 (500)
T 2rh1_A 127 SIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEETCCDFFTNQA 205 (500)
T ss_dssp HHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCTTCCCCCCCHH
T ss_pred HHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceecccccccccchhHH
Confidence 99999999999999999999999888999999999999999999986444 443322 111222343322 22345
Q ss_pred ehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCC---------------C-CCCc-------------------------
Q psy16124 171 YTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSG---------------P-PIHD------------------------- 209 (323)
Q Consensus 171 ~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~---------------~-~~~~------------------------- 209 (323)
|.....++.+++|+++++++|..|++.++++.++ . ....
T Consensus 206 y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (500)
T 2rh1_A 206 YAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKA 285 (500)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcccccccccccccc
Confidence 6666777788999999999999999999887543 0 0000
Q ss_pred -------------------hh----------------------------------------------hhH----------
Q psy16124 210 -------------------KE----------------------------------------------YAT---------- 214 (323)
Q Consensus 210 -------------------~~----------------------------------------------~~~---------- 214 (323)
+. ..+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (500)
T 2rh1_A 286 IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEA 365 (500)
T ss_dssp HTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHH
T ss_pred cCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhhhhccccccc
Confidence 00 000
Q ss_pred -------------------------------HHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy16124 215 -------------------------------ALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLH 263 (323)
Q Consensus 215 -------------------------------~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~ 263 (323)
....++|+|+++++++++++|++||+|+.+..++..+......
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~------ 439 (500)
T 2rh1_A 366 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR------ 439 (500)
T ss_dssp HHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC------
T ss_pred ccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc------
Confidence 0001246789999999999999999999999999888643322
Q ss_pred hHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 264 FLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 264 ~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
..+..+..++.++||++||+||++ |++||+++++++
T Consensus 440 -~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il 475 (500)
T 2rh1_A 440 -KEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELL 475 (500)
T ss_dssp -HHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHH
Confidence 566778889999999999999996 999999999998
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=4.6e-46 Score=329.56 Aligned_cols=278 Identities=19% Similarity=0.281 Sum_probs=233.5
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWV 95 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 95 (323)
....++++|++|| ++++++.+++++|++.|+|++|||++|++.+++.+|..+.....+.|.+++..|++..++..++..
T Consensus 29 ~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 108 (467)
T 3uon_A 29 VAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSN 108 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHHHHH
Confidence 3444589999999 888888889999999999999999999999999999998888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCC--cccCCCceEeeccCCceeehh
Q psy16124 96 ICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDP--KYDEDGYICMLDWGGMAAYTI 173 (323)
Q Consensus 96 ~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~C~~~~~~~~~~~~ 173 (323)
+|.+++++||+|||++|++|++|+...+.+++..+++++|++++++++|+++.+... ....+...|..++.....|..
T Consensus 109 ~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 188 (467)
T 3uon_A 109 ASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTF 188 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCcchHHHH
Confidence 999999999999999999999999999999999999999999999999988764321 123345568888777777777
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCC---------------------------------------------
Q psy16124 174 TLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIH--------------------------------------------- 208 (323)
Q Consensus 174 ~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~--------------------------------------------- 208 (323)
...++.+++|+++++++|..|++.++++.++....
T Consensus 189 ~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (467)
T 3uon_A 189 GTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGR 268 (467)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCccccccccccccccc
Confidence 88888899999999999999999998764311000
Q ss_pred ---c---h------------------------------------------------------------------------
Q psy16124 209 ---D---K------------------------------------------------------------------------ 210 (323)
Q Consensus 209 ---~---~------------------------------------------------------------------------ 210 (323)
. .
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (467)
T 3uon_A 269 NTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVN 348 (467)
T ss_dssp CCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHTTCHHHHHHH
T ss_pred CCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchhhhcCccccccc
Confidence 0 0
Q ss_pred ---------hhhH---------------HHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHH
Q psy16124 211 ---------EYAT---------------ALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLHFLV 266 (323)
Q Consensus 211 ---------~~~~---------------~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
...+ ....++++|+++++++++++|++||+|+.+..++..+...... ..
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~-------~~ 421 (467)
T 3uon_A 349 LAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIP-------NT 421 (467)
T ss_dssp HTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSC-------HH
T ss_pred cccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccc-------hH
Confidence 0000 0001357899999999999999999999999999888764422 66
Q ss_pred HHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 267 LHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 267 ~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
...+..++.++|+++||+||++++++||+++++++
T Consensus 422 ~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll 456 (467)
T 3uon_A 422 VWTIGYWLCYINSTINPACYALCNATFKKTFKHLL 456 (467)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHH
Confidence 77888899999999999999999999999999999
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=8e-46 Score=329.45 Aligned_cols=282 Identities=17% Similarity=0.165 Sum_probs=211.6
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHH-hhhccCcccccccchhHHhHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSV-YPALAQDWVYGNVICRIVGYIEVTLW 94 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~-~~~~~~~~~~~~~~C~~~~~~~~~~~ 94 (323)
....++++|++|| ++++++.+++++|+++|+|++|||++|++.++. +|... .....+.|.+++..|++..++..++.
T Consensus 26 ~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 104 (484)
T 3vw7_A 26 VYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRFVTAAFYCNM 104 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhHHHHHHHHHH
Confidence 3444589999999 888889999999999999999999999999654 55544 44444589999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCccc-CCCceEeeccCCce----
Q psy16124 95 VICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYD-EDGYICMLDWGGMA---- 169 (323)
Q Consensus 95 ~~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~---- 169 (323)
.+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++.+...... .+...|...+....
T Consensus 105 ~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 184 (484)
T 3vw7_A 105 YASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGY 184 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHH
T ss_pred HHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHH
Confidence 9999999999999999999999999889999999999999999999999998876543322 23456876554332
Q ss_pred --eehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCC----------------C-----------------------
Q psy16124 170 --AYTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPI----------------H----------------------- 208 (323)
Q Consensus 170 --~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~----------------~----------------------- 208 (323)
.|.....++.+++|+++++++|..|++.+++++++... .
T Consensus 185 ~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~ 264 (484)
T 3vw7_A 185 YAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSEL 264 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccCCcchhcccccc
Confidence 14455667789999999999999999999876631000 0
Q ss_pred ---------------------------------------------ch---------------------------------
Q psy16124 209 ---------------------------------------------DK--------------------------------- 210 (323)
Q Consensus 209 ---------------------------------------------~~--------------------------------- 210 (323)
..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (484)
T 3vw7_A 265 DKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRW 344 (484)
T ss_dssp HHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCH
T ss_pred cccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccchhhhhhhhccch
Confidence 00
Q ss_pred ------------hh----h--------------HHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy16124 211 ------------EY----A--------------TALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIP 260 (323)
Q Consensus 211 ------------~~----~--------------~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~ 260 (323)
+. + .....++++|+++++++++++|++||+|+.++.++..+...... +
T Consensus 345 ~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~--~ 422 (484)
T 3vw7_A 345 DEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTS--T 422 (484)
T ss_dssp HHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCT--T
T ss_pred hhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc--c
Confidence 00 0 00022235688999999999999999999999998876644322 3
Q ss_pred chhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 261 QLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 261 ~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
.........++.++.++|+++||+||+++|++||+++++++
T Consensus 423 ~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll 463 (484)
T 3vw7_A 423 TEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSIL 463 (484)
T ss_dssp SHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC--------
T ss_pred hhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHH
Confidence 33345677789999999999999999999999999999998
No 6
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=3.1e-44 Score=307.83 Aligned_cols=279 Identities=16% Similarity=0.344 Sum_probs=224.9
Q ss_pred HHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHHHH
Q psy16124 19 GRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWVIC 97 (323)
Q Consensus 19 ~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 97 (323)
..++++|++|| ++++++.+++++|+++|++++|||++|++.+++.+|..+.....++|..++..|++..++..++..+|
T Consensus 40 ~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 119 (364)
T 2ks9_A 40 TVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFAS 119 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHH
Confidence 34489999999 88888899999999999999999999999988889988877777889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCc------eee
Q psy16124 98 NYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGM------AAY 171 (323)
Q Consensus 98 ~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~------~~~ 171 (323)
.+++++|++|||+||++|++|+ .+++++...++++|+++++.++|... +.......+...|..+++.. ..|
T Consensus 120 ~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~-~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 196 (364)
T 2ks9_A 120 IYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGY-YSTTETMPSRVVCMIEWPEHPNKIYEKVY 196 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTT-TSCCCBCTTCSSBCCCCSCCCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHH-HhhheecCCCCEEeecCCCcchhHHHHHH
Confidence 9999999999999999999986 47888888899999999999988764 34444445566787765433 245
Q ss_pred hhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16124 172 TITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDKEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYL 251 (323)
Q Consensus 172 ~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~ 251 (323)
.....++.+++|+++++++|..+.+.++++++.....++.+++ .++++|++++++.++++|++||+|+.+..++..+
T Consensus 197 ~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~---~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~ 273 (364)
T 2ks9_A 197 HICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQ---VSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYI 273 (364)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhh---HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566677889999999999999999888765433322221111 1225678999999999999999999999888777
Q ss_pred hCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhcccccc
Q psy16124 252 SGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCISVCC 306 (323)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~ 306 (323)
...... .........+..++.++|+++||+||++++++||++++++++++.+
T Consensus 274 ~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 325 (364)
T 2ks9_A 274 NPDLYL---KKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325 (364)
T ss_dssp STTSCS---SSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCC
T ss_pred Ccccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCC
Confidence 644311 1112445667788999999999999999999999999999965433
No 7
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.2e-44 Score=308.69 Aligned_cols=270 Identities=18% Similarity=0.311 Sum_probs=225.3
Q ss_pred HHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHHHH
Q psy16124 19 GRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWVIC 97 (323)
Q Consensus 19 ~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 97 (323)
...+++|++|| ++++++.+++++|++.|++++|||++|++.++...|..+.....+.|.+++..|++..++..++..+|
T Consensus 46 ~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 125 (349)
T 1u19_A 46 FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIA 125 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHHH
Confidence 34489999999 88888899999999999999999999999998889988877777889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCC------ceee
Q psy16124 98 NYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGG------MAAY 171 (323)
Q Consensus 98 ~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~------~~~~ 171 (323)
.+++++|++|||+||++|++|++ .+++++...++++|+++++.+.|+++++.....+.....|..++.. ...|
T Consensus 126 ~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 204 (349)
T 1u19_A 126 LWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESF 204 (349)
T ss_dssp HHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCCGGGTHHHH
T ss_pred HHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCccccccchHH
Confidence 99999999999999999999977 6888899999999999999999998887666556666788776532 2345
Q ss_pred hhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16124 172 TITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDKEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYL 251 (323)
Q Consensus 172 ~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~ 251 (323)
.....+..+++|+++++++|..+++.+|+++++.+..+++ ++ +++|.++++..+++.|++||+|+.+..++...
T Consensus 205 ~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~-~~-----~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~ 278 (349)
T 1u19_A 205 VIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATT-QK-----AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT 278 (349)
T ss_dssp HHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCSSSHH-HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhh-HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhee
Confidence 5566667788999999999999999888765543322221 11 14568899999999999999999998887766
Q ss_pred hCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 252 SGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
...... ......+..++..+|+++||++|++++++||+++++++
T Consensus 279 ~~~~~~------~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~ 322 (349)
T 1u19_A 279 HQGSDF------GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTL 322 (349)
T ss_dssp TTTSCC------CHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCCccc------chHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHh
Confidence 543211 13456678889999999999999999999999999998
No 8
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=9.1e-45 Score=322.92 Aligned_cols=294 Identities=19% Similarity=0.232 Sum_probs=227.4
Q ss_pred hHHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHH
Q psy16124 16 LSMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLW 94 (323)
Q Consensus 16 ~~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 94 (323)
.....++++|++|| ++++++.+++++|++.|+|++|||++|++.+++.+|..+.... .|..+...|++..++..++.
T Consensus 26 ~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~~~~~~~ 103 (488)
T 3eml_A 26 TVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFVLVLT 103 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHHHHHHH
Confidence 34445699999999 8888888999999999999999999999999999998776443 57778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccC----CCceEeeccC----
Q psy16124 95 VICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDE----DGYICMLDWG---- 166 (323)
Q Consensus 95 ~~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~----~~~~C~~~~~---- 166 (323)
.+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++++....... ....|..++.
T Consensus 104 ~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 183 (488)
T 3eml_A 104 QSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLF 183 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCEECCH
T ss_pred HHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccceeec
Confidence 99999999999999999999999999999999999999999999999999988776543322 2233443221
Q ss_pred ----CceeehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCc---------------------------------
Q psy16124 167 ----GMAAYTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHD--------------------------------- 209 (323)
Q Consensus 167 ----~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------------- 209 (323)
....+.....++.+++|+++++++|..|++.+++++++.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (488)
T 3eml_A 184 EDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNA 263 (488)
T ss_dssp HHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSSCHHH
T ss_pred cccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCCCCccccc
Confidence 1223445566778899999999999999999987643211000
Q ss_pred --------------------------------------------------------------------------------
Q psy16124 210 -------------------------------------------------------------------------------- 209 (323)
Q Consensus 210 -------------------------------------------------------------------------------- 209 (323)
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (488)
T 3eml_A 264 AKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRML 343 (488)
T ss_dssp HHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHH
T ss_pred cccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCCCCcchhh
Confidence
Q ss_pred -----------------------------------hhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy16124 210 -----------------------------------KEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGH 254 (323)
Q Consensus 210 -----------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~ 254 (323)
.........++++|+++++++++++|++||+|+.++.++..+...
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~ 423 (488)
T 3eml_A 344 QQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPD 423 (488)
T ss_dssp HTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred hhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCc
Confidence 000001112356789999999999999999999999999888754
Q ss_pred ccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhccccccCCCCcccccc
Q psy16124 255 IISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCISVCCKQKSNWDVEL 316 (323)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~~~~~~~~ 316 (323)
.. ........+..+++++|+++||+||++++++||+++++++++.++++++....+.
T Consensus 424 ~~-----~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~~~~~~~~~ 480 (488)
T 3eml_A 424 CS-----HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAHH 480 (488)
T ss_dssp SC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC--------
T ss_pred cc-----cccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcccccCCCCCCCC
Confidence 31 1125567788899999999999999999999999999999776666555444333
No 9
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=325.47 Aligned_cols=281 Identities=20% Similarity=0.343 Sum_probs=231.3
Q ss_pred hhHHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHH
Q psy16124 15 LLSMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTL 93 (323)
Q Consensus 15 ~~~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 93 (323)
...+..++++|++|| ++++++.+++++|++.|+|++|||++|++.+++.+|..+.....++|.+++..|++..++..++
T Consensus 12 ~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 91 (452)
T 3rze_A 12 VVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVA 91 (452)
T ss_dssp GTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHHH
Confidence 345666799999999 8888889999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCccc---CCCceEeeccCCcee
Q psy16124 94 WVICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYD---EDGYICMLDWGGMAA 170 (323)
Q Consensus 94 ~~~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~ 170 (323)
..+|.+++++|++|||++|++|++|+...+++++..+++++|++++++++|.+. +.....+ .....|..++.....
T Consensus 92 ~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~~~C~~~~~~~~~ 170 (452)
T 3rze_A 92 STASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILG-WNHFMQQTSVRREDKCETDFYDVTW 170 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHC-CCC-------CCSSSSCCSCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHhcccccccCCCCeecCCCcccHH
Confidence 999999999999999999999999999999999999999999999999887543 3332222 245668777777777
Q ss_pred ehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCc-----------------------------------------
Q psy16124 171 YTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHD----------------------------------------- 209 (323)
Q Consensus 171 ~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~----------------------------------------- 209 (323)
|.....++.+++|+++++++|..|++.+++++++.....
T Consensus 171 ~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (452)
T 3rze_A 171 FKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKA 250 (452)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCcccccccCC
Confidence 877888888999999999999999999976533200000
Q ss_pred ----------hhh-------------------------------------------------------------------
Q psy16124 210 ----------KEY------------------------------------------------------------------- 212 (323)
Q Consensus 210 ----------~~~------------------------------------------------------------------- 212 (323)
.+.
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (452)
T 3rze_A 251 IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEA 330 (452)
T ss_dssp HTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHTTCHHHH
T ss_pred CCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhhcCCccc
Confidence 000
Q ss_pred -----------------------------hHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy16124 213 -----------------------------ATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLH 263 (323)
Q Consensus 213 -----------------------------~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~ 263 (323)
++....++++|+++++++++++|++||+|+.+..++..+......
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~------ 404 (452)
T 3rze_A 331 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCN------ 404 (452)
T ss_dssp HHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC------
T ss_pred cccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccccc------
Confidence 000011246789999999999999999999999999888765433
Q ss_pred hHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhccc
Q psy16124 264 FLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCIS 303 (323)
Q Consensus 264 ~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~ 303 (323)
.....+..++.++|+++||+||++++++||+++++++++
T Consensus 405 -~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~ 443 (452)
T 3rze_A 405 -EHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI 443 (452)
T ss_dssp -TTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHh
Confidence 334557888999999999999999999999999999943
No 10
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=5e-44 Score=320.02 Aligned_cols=280 Identities=15% Similarity=0.140 Sum_probs=215.5
Q ss_pred HHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHHH
Q psy16124 18 MGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWVI 96 (323)
Q Consensus 18 ~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 96 (323)
...++++|++|| ++++++.+++++|+++|+|++|||++|++.+++..|..+.. ....|..+...|++..++..++..+
T Consensus 70 ~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~~~~~~~ 148 (520)
T 3v2y_A 70 FILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSMFVALSA 148 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHHHHHHHH
Confidence 344589999999 88899999999999999999999999999998888877765 4557888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCceeehhhhh
Q psy16124 97 CNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGMAAYTITLG 176 (323)
Q Consensus 97 s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 176 (323)
|++++++||+|||+||+ |++|+..++++++..+++++|++++++++|+++++... .+...|..+++....+.....
T Consensus 149 S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~ 224 (520)
T 3v2y_A 149 SVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI---SALSSCSTVLPLYHKHYILFC 224 (520)
T ss_dssp HHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT---TCGGGBCSSSTTBBHHHHHHH
T ss_pred HHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc---cCCCcccccCCccchHHHHHH
Confidence 99999999999999999 99999999999999999999999999999998877654 445578877664444444445
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhc----------CCCCC-------------Cc------------------------
Q psy16124 177 CLVLGPSLITIVYTYSYIFSMMRKLK----------SGPPI-------------HD------------------------ 209 (323)
Q Consensus 177 ~~~~~~p~~~~~~~~~~i~~~~~~~~----------~~~~~-------------~~------------------------ 209 (323)
++.+++|+++++++|.+|++.+++++ .+... ..
T Consensus 225 ~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 304 (520)
T 3v2y_A 225 TTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNG 304 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHHHHHTSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhhhHHHHhcCC
Confidence 56789999999999999999998875 00000 00
Q ss_pred ----------------------------------------------------------h---------------------
Q psy16124 210 ----------------------------------------------------------K--------------------- 210 (323)
Q Consensus 210 ----------------------------------------------------------~--------------------- 210 (323)
.
T Consensus 305 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 384 (520)
T 3v2y_A 305 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKS 384 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchhhHhhhhhcc
Confidence 0
Q ss_pred -----hhhHHH----------------hhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHH
Q psy16124 211 -----EYATAL----------------AENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLHFLVLHF 269 (323)
Q Consensus 211 -----~~~~~~----------------~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (323)
..++.. ..++++|+++++++++++|++||+|+.+..++..+...... . ......
T Consensus 385 ~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~-~----~~~~~~ 459 (520)
T 3v2y_A 385 RWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTC-D----ILFRAE 459 (520)
T ss_dssp HHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTC-S----TTTSCH
T ss_pred chhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-c----HHHHHH
Confidence 000000 01136678999999999999999999999998877654311 1 122334
Q ss_pred HHHHHHHHhchhhhhhhhcCCHHHHHHHHHhccccccC
Q psy16124 270 LVVWLGILNSVWKGIVLILMSPQFRIMLRLLCISVCCK 307 (323)
Q Consensus 270 ~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~~ 307 (323)
+..+++++||++||+||.+++++||+++++++++....
T Consensus 460 ~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~ 497 (520)
T 3v2y_A 460 YFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLEV 497 (520)
T ss_dssp HHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSCC--
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhccc
Confidence 56779999999999999999999999999999554433
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=5.5e-44 Score=315.94 Aligned_cols=279 Identities=19% Similarity=0.282 Sum_probs=225.2
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWV 95 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 95 (323)
....++++|++|| ++++++.+++++|+++|+|++|||++|++.++. +|..+.....++|.+++..|++..++..++..
T Consensus 23 ~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 101 (464)
T 4dkl_A 23 LYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMF 101 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHHHHHHHHH
Confidence 3444589999999 888888899999999999999999999999765 88888887788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCc-----ee
Q psy16124 96 ICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGM-----AA 170 (323)
Q Consensus 96 ~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~-----~~ 170 (323)
+|++++++||+|||++|++|++|++..+++++..+++++|++++++++|+++... ..+..+...|..++... ..
T Consensus 102 ~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~~ 180 (464)
T 4dkl_A 102 TSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMAT-TKYRQGSIDCTLTFSHPTWYWENL 180 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBC-CEEETTEEECCBCCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHhee-ecccCCCceEEeecCCcchHHHHH
Confidence 9999999999999999999999998889999999999999999999998876433 33445556677665443 23
Q ss_pred ehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCc-----------------------------------------
Q psy16124 171 YTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHD----------------------------------------- 209 (323)
Q Consensus 171 ~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~----------------------------------------- 209 (323)
|.....++.+++|+++++++|..|++.++++++..+...
T Consensus 181 ~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 4dkl_A 181 LKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKA 260 (464)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCcccccccccccc
Confidence 556667778899999999999999999876544100000
Q ss_pred ----------hh--------------------------------------------------------------------
Q psy16124 210 ----------KE-------------------------------------------------------------------- 211 (323)
Q Consensus 210 ----------~~-------------------------------------------------------------------- 211 (323)
.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (464)
T 4dkl_A 261 IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEA 340 (464)
T ss_dssp HSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHH
T ss_pred ccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccccchhhcccchh
Confidence 00
Q ss_pred ---------------h-------------hHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy16124 212 ---------------Y-------------ATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLH 263 (323)
Q Consensus 212 ---------------~-------------~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~ 263 (323)
. ......++++|+++++++++++|++||+|+.+..++..+.... ....
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~----~~~~ 416 (464)
T 4dkl_A 341 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIP----ETTF 416 (464)
T ss_dssp HHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC----CCHH
T ss_pred hcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCC----cccc
Confidence 0 0000112346889999999999999999999999988776533 1222
Q ss_pred hHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 264 FLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 264 ~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
......+..++.++|+++||+||++++++||+++++++
T Consensus 417 ~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 417 QTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 35566788889999999999999999999999999975
No 12
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=1.6e-43 Score=311.57 Aligned_cols=278 Identities=17% Similarity=0.282 Sum_probs=226.9
Q ss_pred HHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhh-hhhHHhhhccCcccccccchhHHhHHHHHHHHHH
Q psy16124 20 RRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLV-VPLSVYPALAQDWVYGNVICRIVGYIEVTLWVIC 97 (323)
Q Consensus 20 ~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~-~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 97 (323)
.++++|++|| ++++++.+++++|++.|++++|||++|++.+++. +|..+.....++|.+++..|++..++..++..+|
T Consensus 43 ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S 122 (448)
T 2z73_A 43 ICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMS 122 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 3488999999 8888888899999999999999999999998764 7888777777889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCc----eeehh
Q psy16124 98 NYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGM----AAYTI 173 (323)
Q Consensus 98 ~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~----~~~~~ 173 (323)
++++++|++|||++|++|++|++..+++++..+++++|++++++++++++.+.....+.....|..++... ..+..
T Consensus 123 ~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 202 (448)
T 2z73_A 123 IMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNIL 202 (448)
T ss_dssp HHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHHHH
Confidence 99999999999999999999998899999999999999999999999888777665555666787765432 23445
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCC------CCCchhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHH
Q psy16124 174 TLGCLVLGPSLITIVYTYSYIFSMMRKLKSGP------PIHDKEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKL 247 (323)
Q Consensus 174 ~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~ 247 (323)
...++.+++|+++++++|..|++.++|++++. .......+.+...++++|.++++++++++|++||+|+.+..+
T Consensus 203 ~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~ 282 (448)
T 2z73_A 203 CMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVAL 282 (448)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 55666788999999999999999888754321 111111111222234678899999999999999999999988
Q ss_pred HHHHhCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhccc
Q psy16124 248 YEYLSGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCIS 303 (323)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~ 303 (323)
+..+...... ......+..++..+|+++||+||++++++||+++++++++
T Consensus 283 ~~~~~~~~~~------~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 283 LAQFGPLEWV------TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp HHHHSCGGGC------CHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred HHHhCCcccC------ChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 8777543211 1445567788999999999999999999999999999865
No 13
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=3.5e-45 Score=322.10 Aligned_cols=292 Identities=18% Similarity=0.235 Sum_probs=221.6
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWV 95 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 95 (323)
....++++|++|| ++++++.+++++|+++|+|++|||++|++.+++.+|..+... ..|..+...|++..++..++..
T Consensus 37 i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~ 114 (447)
T 4eiy_A 37 VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQ 114 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHHHHHHHHH
Confidence 3344589999999 888888899999999999999999999999988999877643 3566788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCC----CceEeec-------
Q psy16124 96 ICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDED----GYICMLD------- 164 (323)
Q Consensus 96 ~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~----~~~C~~~------- 164 (323)
+|.+++++||+|||++|++|++|+...+++++..+++++|++++++++|+++++........ ...|..+
T Consensus 115 ~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 194 (447)
T 4eiy_A 115 SSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFE 194 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHH
T ss_pred HHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccchhhccc
Confidence 99999999999999999999999998999999999999999999999999887765433211 1223322
Q ss_pred cCC-ceeehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCc----------------------------------
Q psy16124 165 WGG-MAAYTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHD---------------------------------- 209 (323)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~---------------------------------- 209 (323)
... ...+.....++.+++|+++++++|..|++.+|++.++.....
T Consensus 195 ~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (447)
T 4eiy_A 195 DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQ 274 (447)
T ss_dssp HHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCC
Confidence 111 122333345556789999999999999999988633211000
Q ss_pred ---------------------------------------------------------------hhhhHHHhhccCCCcch
Q psy16124 210 ---------------------------------------------------------------KEYATALAENLSNPSHN 226 (323)
Q Consensus 210 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~ 226 (323)
...+.+...++++|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k 354 (447)
T 4eiy_A 275 KATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAK 354 (447)
T ss_dssp C---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHH
Confidence 00011112245678999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhcccccc
Q psy16124 227 MSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCISVCC 306 (323)
Q Consensus 227 ~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~ 306 (323)
++++++++|++||+|+.+..++..+...... .......++.++.++|+++||+||++++++||+++++++++.++
T Consensus 355 ~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~ 429 (447)
T 4eiy_A 355 SLAIIVGLFALCWLPLHIINCFTFFCPDCSH-----APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL 429 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC-
T ss_pred HHHHhhhhhheeccHHHHHHHHHHhcCcccc-----cchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988887643211 12556778899999999999999999999999999999977666
Q ss_pred CCCCccccc
Q psy16124 307 KQKSNWDVE 315 (323)
Q Consensus 307 ~~~~~~~~~ 315 (323)
+.+...+.+
T Consensus 430 r~~~~~~~~ 438 (447)
T 4eiy_A 430 RQQEPFKAH 438 (447)
T ss_dssp ---------
T ss_pred ccCCCCCCC
Confidence 655444333
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=4.1e-44 Score=318.21 Aligned_cols=273 Identities=19% Similarity=0.327 Sum_probs=222.9
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhcc-CcccccccchhHHhHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALA-QDWVYGNVICRIVGYIEVTLW 94 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~ 94 (323)
.+..++++|++|| ++++++.+++++|+++|+|++|||++|++.+++.+|..+..... +.|.+++..|++..++..++.
T Consensus 44 ~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 123 (481)
T 3pbl_A 44 SYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMC 123 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHHHHHHH
Confidence 4555689999999 88888899999999999999999999999998999988776555 678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCC---cccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCceee
Q psy16124 95 VICNYTFMWMSVDRYLAVRKPLRY---ETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGMAAY 171 (323)
Q Consensus 95 ~~s~~~l~~iaidRy~ai~~p~~~---~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 171 (323)
.++++++++|++|||++|++|++| ....+.+++..+++++|++++++++|+++++.. ..+...|..++ ..|
T Consensus 124 ~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~---~~~~~~C~~~~---~~~ 197 (481)
T 3pbl_A 124 TASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT---TGDPTVCSISN---PDF 197 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCC---CSSTTCCSCCC---HHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecc---cCCCCcccccC---ccH
Confidence 999999999999999999999998 566778888999999999999999998876554 23445576543 235
Q ss_pred hhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCchh----------------------------------------
Q psy16124 172 TITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDKE---------------------------------------- 211 (323)
Q Consensus 172 ~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------------------------------- 211 (323)
.....++.+++|+++++++|..|++.+++++++......+
T Consensus 198 ~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (481)
T 3pbl_A 198 VIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDK 277 (481)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCcccccCCCcccc
Confidence 5666777889999999999999999998875542100000
Q ss_pred --------------------------------------------------------------------------------
Q psy16124 212 -------------------------------------------------------------------------------- 211 (323)
Q Consensus 212 -------------------------------------------------------------------------------- 211 (323)
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (481)
T 3pbl_A 278 AIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 357 (481)
T ss_dssp HHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHH
T ss_pred hhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccchhccccccc
Confidence
Q ss_pred ------------hhHHH-----------------hhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy16124 212 ------------YATAL-----------------AENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQL 262 (323)
Q Consensus 212 ------------~~~~~-----------------~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~ 262 (323)
....+ ..++++|+++++++++++|++||+|+.+..++..+......
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~----- 432 (481)
T 3pbl_A 358 AAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHV----- 432 (481)
T ss_dssp HHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC-----
T ss_pred cchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccC-----
Confidence 00000 00136789999999999999999999999988777543211
Q ss_pred hhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 263 HFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 263 ~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
......+..++.++|+++||+||++++++||+++++++
T Consensus 433 -~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll 470 (481)
T 3pbl_A 433 -SPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKIL 470 (481)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHH
Confidence 25567788899999999999999999999999999999
No 15
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=9.9e-44 Score=317.39 Aligned_cols=282 Identities=18% Similarity=0.210 Sum_probs=224.7
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWV 95 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 95 (323)
....++++|++|| ++++++.+++++|+++|+|++|||++|++.+ +.+|..+..... +|.+++..|++..++..++..
T Consensus 54 ~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~~~~~~~~~~ 131 (502)
T 3odu_A 54 IYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAVHVIYTVNLY 131 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhHHHHHHHHHH
Confidence 3444589999999 8888899999999999999999999999994 688888776554 789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCc---eeeh
Q psy16124 96 ICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGM---AAYT 172 (323)
Q Consensus 96 ~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~~ 172 (323)
+|++++++||+|||+||++|++|+...+++++..+++++|++++++++|+++.... ....+...|...++.. ..|.
T Consensus 132 ~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~ 210 (502)
T 3odu_A 132 SSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANV-SEADDRYICDRFYPNDLWVVVFQ 210 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEE-EECSSSEEEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheee-eccCCceEEeecCCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999998775433 2334556788765543 2355
Q ss_pred hhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCch------------------------------------------
Q psy16124 173 ITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDK------------------------------------------ 210 (323)
Q Consensus 173 ~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~------------------------------------------ 210 (323)
....++.+++|+++++++|..|++.+++++++......
T Consensus 211 ~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (502)
T 3odu_A 211 FQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAI 290 (502)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCccccccchhhhccc
Confidence 55667788999999999999999999986543100000
Q ss_pred --------------------------------------------------------------------------------
Q psy16124 211 -------------------------------------------------------------------------------- 210 (323)
Q Consensus 211 -------------------------------------------------------------------------------- 210 (323)
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (502)
T 3odu_A 291 GRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAA 370 (502)
T ss_dssp TSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccccchhhhchhhhhc
Confidence
Q ss_pred ---------------------------hhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc---ccc
Q psy16124 211 ---------------------------EYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIIS---FIP 260 (323)
Q Consensus 211 ---------------------------~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~---~~~ 260 (323)
........++++|+++++++++++|++||+|+.+..++..+...... +..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~ 450 (502)
T 3odu_A 371 VNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEF 450 (502)
T ss_dssp HHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHH
T ss_pred cccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhcccc
Confidence 00000111235789999999999999999999999988877533211 111
Q ss_pred chhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 261 QLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 261 ~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
......+..++.++.++|+++||+||++++++||+++++++
T Consensus 451 ~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll 491 (502)
T 3odu_A 451 ENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHAL 491 (502)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHh
Confidence 22234556688899999999999999999999999999998
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=4.9e-43 Score=291.94 Aligned_cols=266 Identities=19% Similarity=0.278 Sum_probs=208.9
Q ss_pred HHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHHH
Q psy16124 18 MGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWVI 96 (323)
Q Consensus 18 ~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 96 (323)
...++++|++|| ++++++.++|++|+++|+|+.|||++|++.++ ..|....... ++|..|+..|+...++...+..+
T Consensus 18 y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~ 95 (296)
T 2lnl_A 18 YALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSLLKEVNFYS 95 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHHhhhhhhhHHH
Confidence 334588999999 88889999999999999999999999999864 5666655443 56899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeecc-----CCceee
Q psy16124 97 CNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDW-----GGMAAY 171 (323)
Q Consensus 97 s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~-----~~~~~~ 171 (323)
|.+++++||+|||+||++|++|+... +++...+++++|+.+++.+.|+.........+.+...|.... .....+
T Consensus 96 s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (296)
T 2lnl_A 96 GILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVL 174 (296)
T ss_dssp HHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHH
T ss_pred HHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHH
Confidence 99999999999999999999998754 456667788899999999999888766554444333332211 122345
Q ss_pred hhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16124 172 TITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDKEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYL 251 (323)
Q Consensus 172 ~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~ 251 (323)
........+++|+.++..+|..+.+.++++++ + +++|++|++..++++|++||+|+.+..++..+
T Consensus 175 ~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~------~---------~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~ 239 (296)
T 2lnl_A 175 RILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM------G---------QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTL 239 (296)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC------H---------HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------h---------hhhhHHHHHHHhhhheeeeehHHHHHHHHHHH
Confidence 55666778889999999999877544332211 0 13568899999999999999999999998888
Q ss_pred hCCcccccc---chhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 252 SGHIISFIP---QLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 252 ~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
......... .........++.+++++||++||+||+++|++||++++|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll 292 (296)
T 2lnl_A 240 MRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKIL 292 (296)
T ss_dssp TCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHH
T ss_pred hccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 765422111 12223456678889999999999999999999999999998
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=303.07 Aligned_cols=272 Identities=20% Similarity=0.293 Sum_probs=213.3
Q ss_pred HHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHHH
Q psy16124 18 MGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWVI 96 (323)
Q Consensus 18 ~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 96 (323)
...++++|++|| ++++++.+++++|+++|++++|||++|++. ++.+|..+.....+.|.+++..|++..++..++..+
T Consensus 132 ~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 210 (434)
T 4ea3_A 132 YLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFT 210 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHH
Confidence 334588899999 888888999999999999999999999998 678888888777788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeeccCCc-----eee
Q psy16124 97 CNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLDWGGM-----AAY 171 (323)
Q Consensus 97 s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~-----~~~ 171 (323)
|.+++++|++|||++|++|++|+..++++++..+++++|++++++++|..+.. ......+...|..+.... ..|
T Consensus 211 S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~-~~~~~~~~~~c~~~~~~~~~~~~~~~ 289 (434)
T 4ea3_A 211 STFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMG-SAQVEDEEIECLVEIPTPQDYWGPVF 289 (434)
T ss_dssp HHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHE-EECCCSSCCCEEECCCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheee-eeEeecCceeEEEecCChHhHHHHHH
Confidence 99999999999999999999999999999999999999999999998876643 223344556787765443 235
Q ss_pred hhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhHHHhhccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16124 172 TITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPIHDKEYATALAENLSNPSHNMSFSLIMTFWLSWLPYIVVKLYEYL 251 (323)
Q Consensus 172 ~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~ 251 (323)
.....++.+++|+++++++|..|++.+|+++++... ++.. ++++|.++++++++++|++||+|+.+..++..+
T Consensus 290 ~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~--~~~~-----~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~ 362 (434)
T 4ea3_A 290 AICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGS--REKD-----RNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGL 362 (434)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSSC--HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--hhhH-----HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556667788999999999999999998876543321 1111 124678899999999999999999999888766
Q ss_pred hCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhcc
Q psy16124 252 SGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCI 302 (323)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~ 302 (323)
.... ..........++.++.++|+++||+||++++++||++++++++
T Consensus 363 ~~~~----~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~ 409 (434)
T 4ea3_A 363 GVQP----SSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCC 409 (434)
T ss_dssp TCCC----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----
T ss_pred ccCC----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5433 1222344566777789999999999999999999999999873
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=8.5e-44 Score=318.37 Aligned_cols=277 Identities=24% Similarity=0.391 Sum_probs=218.6
Q ss_pred HHHHHHHHHhhcc-eEEEEEeecCCcchhHHHHHHHHHHHHHHHHHhhhhhHHhhhccCcccccccchhHHhHHHHHHHH
Q psy16124 17 SMGRRQCVDIALD-AQITPWYSAQCPGEMINYYILSLAMADLLFGLLVVPLSVYPALAQDWVYGNVICRIVGYIEVTLWV 95 (323)
Q Consensus 17 ~~~~~~~~gl~~N-~v~~~i~~~~~~r~~~~~~l~~La~~Dll~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 95 (323)
....++++|++|| ++++++.+++++|+++|++++|||++|++.+++.+|..+.....+.|.+++..|++..++..++..
T Consensus 188 ~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~ 267 (514)
T 3sn6_R 188 VMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVT 267 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHHH
Confidence 4445589999999 888888899999999999999999999999888999988888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcccccccchhhhHHHHHHHHHHhhhhcccccCCCcccCCCceEeec-----cCCcee
Q psy16124 96 ICNYTFMWMSVDRYLAVRKPLRYETVQTKTRCQCWMAFTWISSAMVCCPPLLDFSDPKYDEDGYICMLD-----WGGMAA 170 (323)
Q Consensus 96 ~s~~~l~~iaidRy~ai~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~-----~~~~~~ 170 (323)
+|++++++||+|||++|++|++|+...+++++..+++++|++++++++++...........+...|... ......
T Consensus 268 ~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 347 (514)
T 3sn6_R 268 ASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQA 347 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCCCCCCHH
T ss_pred HHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccccccccH
Confidence 999999999999999999999999888999999999999999999987665432221112222223221 223345
Q ss_pred ehhhhhHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCC-------C------------chhhhHHHhhccCCCcchhhHHH
Q psy16124 171 YTITLGCLVLGPSLITIVYTYSYIFSMMRKLKSGPPI-------H------------DKEYATALAENLSNPSHNMSFSL 231 (323)
Q Consensus 171 ~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~-------~------------~~~~~~~~~~~~~~~~~~~~~~i 231 (323)
|.....++.+++|+++++++|..|++.+|++.++.+. + ....+.+...++++|.+++++++
T Consensus 348 y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~i 427 (514)
T 3sn6_R 348 YAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGII 427 (514)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHH
Confidence 6667777889999999999999999998875321100 0 00001111112356788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 232 IMTFWLSWLPYIVVKLYEYLSGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 232 ~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
+++|++||+|+.+..++..+...... .....+..++.++|+++||+||+ ++++||+++++++
T Consensus 428 v~~F~lcwlP~~i~~~~~~~~~~~~~-------~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l 489 (514)
T 3sn6_R 428 MGTFTLCWLPFFIVNIVHVIQDNLIR-------KEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELL 489 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccc-------hHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHh
Confidence 99999999999999988877544322 45667788899999999999999 9999999999998
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.75 E-value=3.9e-09 Score=58.31 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhc
Q psy16124 268 HFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLC 301 (323)
Q Consensus 268 ~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~ 301 (323)
..++.+++++||++||+||++.+++||+++++++
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~ 36 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMF 36 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHh
Confidence 4567789999999999999999999999999987
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.69 E-value=5.8e-09 Score=54.44 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCccccccc
Q psy16124 96 ICNYTFMWMSVDRYLAVRKPLRYETVQTKT 125 (323)
Q Consensus 96 ~s~~~l~~iaidRy~ai~~p~~~~~~~~~~ 125 (323)
+|++++++|++|||++|++|++|+..++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 588999999999999999999998776655
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.02 E-value=4.6e-07 Score=47.22 Aligned_cols=28 Identities=7% Similarity=0.192 Sum_probs=24.7
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHH
Q psy16124 221 SNPSHNMSFSLIMTFWLSWLPYIVVKLY 248 (323)
Q Consensus 221 ~~~~~~~~~~i~~~f~i~~~P~~i~~~~ 248 (323)
|+|.+|++..+++.|++||+||.+..++
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~ 28 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAH 28 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHH
Confidence 4678999999999999999999987654
No 22
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=86.32 E-value=8.1 Score=32.88 Aligned_cols=35 Identities=6% Similarity=0.066 Sum_probs=20.4
Q ss_pred HhchhhhhhhhcCCHHHHHHHHHhccccccCCCCc
Q psy16124 277 LNSVWKGIVLILMSPQFRIMLRLLCISVCCKQKSN 311 (323)
Q Consensus 277 ~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~~~ 311 (323)
.-..+||.+--+.---+.+++|+.+++.+|+++++
T Consensus 380 ~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~ 414 (434)
T 4ea3_A 380 ALGYVNSCLNPILYAFLDENFKACFRKFCCASALG 414 (434)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC
Confidence 34567888777777777899999998887765543
No 23
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=81.52 E-value=0.65 Score=20.88 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=11.4
Q ss_pred HHHHHHHHHhcccc
Q psy16124 291 PQFRIMLRLLCISV 304 (323)
Q Consensus 291 ~~fR~~~~~~~~~~ 304 (323)
++||+.++++|++.
T Consensus 4 krfrkkfkklfkkl 17 (27)
T 2ket_A 4 KRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 68999999998653
No 24
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=72.50 E-value=0.087 Score=31.42 Aligned_cols=23 Identities=0% Similarity=-0.202 Sum_probs=17.1
Q ss_pred HHHHHHHHhhcc-eEEEEEeecCC
Q psy16124 18 MGRRQCVDIALD-AQITPWYSAQC 40 (323)
Q Consensus 18 ~~~~~~~gl~~N-~v~~~i~~~~~ 40 (323)
...++++|++|| ++++++.++|.
T Consensus 35 Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 35 YMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp HHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHhhhhhheeeeeEecc
Confidence 334488999999 88877776664
No 25
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=55.65 E-value=17 Score=29.70 Aligned_cols=32 Identities=6% Similarity=-0.201 Sum_probs=21.9
Q ss_pred hchhhhhhhhcCCHHHHHHHHHhccccccCCC
Q psy16124 278 NSVWKGIVLILMSPQFRIMLRLLCISVCCKQK 309 (323)
Q Consensus 278 ~~~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~ 309 (323)
-..+|+.+--+.---+.+++|+.+++.+++.+
T Consensus 293 l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~ 324 (364)
T 2ks9_A 293 LAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCP 324 (364)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 34556666666666677899999887665544
No 26
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=34.61 E-value=13 Score=32.55 Aligned_cols=38 Identities=13% Similarity=-0.044 Sum_probs=23.2
Q ss_pred HHHHHhchhhhhhhhcCCHHHHHHHHHhccccccCCCCc
Q psy16124 273 WLGILNSVWKGIVLILMSPQFRIMLRLLCISVCCKQKSN 311 (323)
Q Consensus 273 ~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~~~ 311 (323)
.+...-..+|+.+--+.-- +.+.+|+.+++..|+++++
T Consensus 458 ~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~ 495 (514)
T 3sn6_R 458 ILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSS 495 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCccc
Confidence 3344445677777767666 7788999998876655443
No 27
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=26.73 E-value=69 Score=26.85 Aligned_cols=34 Identities=9% Similarity=-0.138 Sum_probs=15.8
Q ss_pred chhhhhhhhcCCHHHHHHHHHhccccccCCCCcc
Q psy16124 279 SVWKGIVLILMSPQFRIMLRLLCISVCCKQKSNW 312 (323)
Q Consensus 279 ~~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~~~~ 312 (323)
..+|+.+--+.---+.+++|+.+++..++..++.
T Consensus 398 ~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~r~ 431 (447)
T 4eiy_A 398 SHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ 431 (447)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC---
T ss_pred HHHHhccchhhhHhccHHHHHHHHHHHHHHHhcc
Confidence 3344444444444455666666655544444333
No 28
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=25.09 E-value=45 Score=17.04 Aligned_cols=16 Identities=19% Similarity=0.089 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHhc
Q psy16124 187 IVYTYSYIFSMMRKLK 202 (323)
Q Consensus 187 ~~~~~~~i~~~~~~~~ 202 (323)
+++.|..+.+--+|++
T Consensus 13 ~~ifYFl~iRPQ~Kr~ 28 (37)
T 2rdd_B 13 GLIFYFMILRPQQKRT 28 (37)
T ss_dssp HHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHH
Confidence 3566777766665554
No 29
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=25.00 E-value=1.6e+02 Score=24.69 Aligned_cols=80 Identities=4% Similarity=-0.037 Sum_probs=40.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHhchhhhhhhhcCCHHHHHHHHHhccc
Q psy16124 224 SHNMSFSLIMTFWLSWLPYIVVKLYEYLSGHIISFIPQLHFLVLHFLVVWLGILNSVWKGIVLILMSPQFRIMLRLLCIS 303 (323)
Q Consensus 224 ~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iY~~~~~~fR~~~~~~~~~ 303 (323)
-.|....+.++.++..+-+.=..++........ .........+...-..+|+.+--+.---+.+.+|+-+++
T Consensus 383 ~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~--------~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ 454 (467)
T 3uon_A 383 EKKVTRTILAILLAFIITWAPYNVMVLINTFCA--------PCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKH 454 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS--------TTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHH
Confidence 345555555555555444444444433332220 112233334444445666666666666778899999988
Q ss_pred cccCCCCc
Q psy16124 304 VCCKQKSN 311 (323)
Q Consensus 304 ~~~~~~~~ 311 (323)
..|++.++
T Consensus 455 ll~c~~~~ 462 (467)
T 3uon_A 455 LLMCHYKN 462 (467)
T ss_dssp HCC-----
T ss_pred HHhhhccC
Confidence 66544433
Done!