Query psy16136
Match_columns 332
No_of_seqs 332 out of 1918
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 21:46:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16136.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16136hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0006 PepP Xaa-Pro aminopept 100.0 1.9E-43 4.1E-48 341.7 24.8 240 8-290 127-374 (384)
2 PRK10879 proline aminopeptidas 100.0 2.4E-43 5.3E-48 345.1 24.5 245 32-291 161-419 (438)
3 KOG2414|consensus 100.0 3.1E-43 6.6E-48 325.1 18.3 245 31-290 215-470 (488)
4 PRK15173 peptidase; Provisiona 100.0 7.3E-41 1.6E-45 315.9 25.1 239 8-291 68-314 (323)
5 TIGR02993 ectoine_eutD ectoine 100.0 4.2E-41 9.1E-46 325.6 23.7 242 8-290 131-381 (391)
6 PRK09795 aminopeptidase; Provi 100.0 4.5E-41 9.7E-46 322.5 23.7 218 37-290 120-349 (361)
7 KOG2737|consensus 100.0 1.5E-41 3.2E-46 311.0 16.7 253 34-290 175-465 (492)
8 PRK14575 putative peptidase; P 100.0 2.6E-40 5.7E-45 321.3 25.4 239 8-291 151-397 (406)
9 PRK14576 putative endopeptidas 100.0 5E-40 1.1E-44 319.2 25.1 240 9-293 151-398 (405)
10 PRK13607 proline dipeptidase; 100.0 1.1E-39 2.5E-44 318.9 23.4 249 32-292 149-439 (443)
11 PLN03158 methionine aminopepti 100.0 1.4E-39 3.1E-44 312.2 20.7 233 37-292 130-381 (396)
12 PRK12897 methionine aminopepti 100.0 1.2E-38 2.5E-43 290.7 21.6 224 43-290 3-246 (248)
13 PRK12318 methionine aminopepti 100.0 2.1E-38 4.6E-43 294.7 21.6 237 34-290 32-287 (291)
14 PRK07281 methionine aminopepti 100.0 4.2E-38 9.1E-43 291.3 22.3 231 43-292 3-280 (286)
15 TIGR00500 met_pdase_I methioni 100.0 7.1E-38 1.5E-42 285.4 23.4 227 43-291 2-246 (247)
16 KOG2738|consensus 100.0 1.5E-37 3.3E-42 276.9 17.0 229 42-292 114-360 (369)
17 PRK12896 methionine aminopepti 100.0 5.1E-37 1.1E-41 280.8 19.3 229 41-291 7-254 (255)
18 PRK05716 methionine aminopepti 100.0 2.9E-36 6.3E-41 275.4 22.9 232 42-291 3-248 (252)
19 cd01090 Creatinase Creatine am 100.0 1.2E-35 2.6E-40 267.5 20.4 212 50-290 1-227 (228)
20 cd01087 Prolidase Prolidase. E 100.0 1.6E-35 3.4E-40 269.3 19.8 225 50-290 1-242 (243)
21 cd01086 MetAP1 Methionine Amin 100.0 2.8E-33 6.2E-38 253.6 20.1 219 50-290 1-237 (238)
22 cd01092 APP-like Similar to Pr 100.0 2.8E-32 6E-37 241.6 21.4 144 50-199 1-144 (208)
23 COG0024 Map Methionine aminope 100.0 1.2E-31 2.6E-36 241.0 19.2 228 44-292 5-252 (255)
24 PF00557 Peptidase_M24: Metall 100.0 5.3E-31 1.2E-35 233.5 20.0 144 51-200 1-144 (207)
25 cd01091 CDC68-like Related to 100.0 3.3E-31 7.1E-36 240.5 18.7 215 50-290 1-242 (243)
26 cd01089 PA2G4-like Related to 100.0 7.2E-31 1.6E-35 236.5 18.8 205 50-290 1-227 (228)
27 cd01085 APP X-Prolyl Aminopept 100.0 4.5E-30 9.8E-35 230.5 21.0 203 51-287 5-220 (224)
28 cd01066 APP_MetAP A family inc 100.0 1.6E-29 3.4E-34 222.3 20.1 198 50-285 1-206 (207)
29 TIGR00495 crvDNA_42K 42K curve 100.0 4.1E-27 8.8E-32 226.5 22.3 158 42-204 11-191 (389)
30 PTZ00053 methionine aminopepti 100.0 9.4E-27 2E-31 225.8 21.1 153 41-200 149-305 (470)
31 TIGR00501 met_pdase_II methion 99.9 1.9E-26 4.1E-31 215.0 21.7 149 47-204 2-157 (295)
32 cd01088 MetAP2 Methionine Amin 99.9 7.6E-26 1.7E-30 210.7 22.1 172 51-232 2-194 (291)
33 PRK08671 methionine aminopepti 99.9 4.8E-26 1E-30 212.1 20.2 147 49-204 1-154 (291)
34 KOG2413|consensus 99.8 1.4E-19 3.1E-24 176.0 17.3 196 35-232 298-523 (606)
35 KOG1189|consensus 99.8 9.8E-18 2.1E-22 165.5 16.4 187 31-225 124-345 (960)
36 COG5406 Nucleosome binding fac 99.5 1.2E-13 2.7E-18 134.5 13.2 163 31-199 157-339 (1001)
37 KOG2775|consensus 99.5 1.2E-12 2.6E-17 117.9 17.1 253 45-315 80-369 (397)
38 KOG2776|consensus 99.4 1.4E-11 3E-16 113.7 15.0 153 43-199 14-181 (398)
39 PF05195 AMP_N: Aminopeptidase 99.3 2.3E-12 5.1E-17 106.5 2.9 92 211-309 40-133 (134)
40 KOG2737|consensus 99.1 4E-11 8.7E-16 111.4 3.3 74 210-286 62-135 (492)
41 PRK10879 proline aminopeptidas 98.4 1.1E-06 2.5E-11 86.6 9.8 88 211-306 40-132 (438)
42 cd01066 APP_MetAP A family inc 95.3 0.34 7.4E-06 41.7 11.8 99 51-152 102-202 (207)
43 PRK13607 proline dipeptidase; 95.2 0.016 3.4E-07 57.4 3.5 65 211-280 49-116 (443)
44 KOG2738|consensus 94.5 0.16 3.4E-06 47.0 7.5 72 159-232 124-217 (369)
45 KOG2414|consensus 93.5 0.093 2E-06 50.4 4.3 76 211-289 101-179 (488)
46 PLN03158 methionine aminopepti 93.3 0.37 8E-06 47.0 8.2 58 141-199 126-185 (396)
47 PRK05716 methionine aminopepti 93.3 1.2 2.7E-05 40.2 11.3 96 52-152 119-238 (252)
48 cd01085 APP X-Prolyl Aminopept 93.0 0.17 3.7E-06 45.4 5.0 37 196-232 160-206 (224)
49 cd01092 APP-like Similar to Pr 92.9 2.1 4.7E-05 37.1 11.9 99 51-152 103-203 (208)
50 TIGR00500 met_pdase_I methioni 92.9 1.7 3.8E-05 39.1 11.6 82 53-139 118-205 (247)
51 PRK08671 methionine aminopepti 92.9 2.3 5.1E-05 39.6 12.7 97 53-152 103-204 (291)
52 COG0024 Map Methionine aminope 92.5 0.66 1.4E-05 42.4 8.1 41 159-199 13-53 (255)
53 cd01086 MetAP1 Methionine Amin 91.9 0.92 2E-05 40.7 8.4 43 158-200 2-44 (238)
54 cd01088 MetAP2 Methionine Amin 91.6 0.95 2.1E-05 42.2 8.5 44 158-201 2-45 (291)
55 cd01091 CDC68-like Related to 91.3 2.6 5.6E-05 38.3 10.7 99 52-152 120-232 (243)
56 PRK12896 methionine aminopepti 90.9 4.3 9.4E-05 36.7 11.9 96 53-152 125-244 (255)
57 TIGR02993 ectoine_eutD ectoine 90.6 3 6.5E-05 40.6 11.2 98 52-152 271-372 (391)
58 PRK12897 methionine aminopepti 90.3 3.5 7.6E-05 37.3 10.7 82 53-138 119-205 (248)
59 PRK12318 methionine aminopepti 90.3 3.7 8.1E-05 38.3 11.1 84 52-140 159-247 (291)
60 TIGR00501 met_pdase_II methion 89.1 2.8 6E-05 39.2 9.2 97 53-152 106-207 (295)
61 cd01090 Creatinase Creatine am 89.1 5.8 0.00013 35.5 11.0 98 52-152 110-218 (228)
62 PRK15173 peptidase; Provisiona 88.1 7 0.00015 37.0 11.4 99 52-152 203-304 (323)
63 cd01089 PA2G4-like Related to 87.8 6.4 0.00014 35.1 10.5 92 51-152 120-218 (228)
64 KOG2775|consensus 87.6 3.3 7.2E-05 38.5 8.3 89 158-250 86-195 (397)
65 PF00557 Peptidase_M24: Metall 87.5 9.5 0.0002 33.1 11.2 96 53-152 104-205 (207)
66 PRK09795 aminopeptidase; Provi 87.4 5.7 0.00012 38.1 10.4 104 46-152 235-340 (361)
67 PRK14575 putative peptidase; P 87.2 7.5 0.00016 38.0 11.3 99 52-152 286-387 (406)
68 PRK07281 methionine aminopepti 86.2 11 0.00024 35.1 11.3 84 52-139 149-237 (286)
69 COG0006 PepP Xaa-Pro aminopept 85.8 9.9 0.00022 36.7 11.3 98 53-152 264-365 (384)
70 cd01087 Prolidase Prolidase. E 85.7 13 0.00029 33.3 11.4 100 52-152 104-233 (243)
71 PRK14576 putative endopeptidas 84.4 13 0.00029 36.3 11.5 99 52-152 285-386 (405)
72 TIGR00495 crvDNA_42K 42K curve 84.1 11 0.00023 36.8 10.6 97 52-150 139-246 (389)
73 PTZ00053 methionine aminopepti 83.3 9.8 0.00021 38.0 10.0 100 52-152 264-375 (470)
74 KOG2801|consensus 34.6 37 0.0008 31.6 2.9 45 7-60 115-159 (559)
75 KOG1189|consensus 32.1 2.2E+02 0.0048 30.3 8.2 97 52-155 258-368 (960)
76 COG5406 Nucleosome binding fac 29.5 1.8E+02 0.0039 30.3 6.9 70 63-137 310-385 (1001)
77 TIGR02531 yecD_yerC TrpR-relat 28.5 2.6E+02 0.0057 21.1 6.9 33 44-84 28-60 (88)
78 COG1084 Predicted GTPase [Gene 28.2 2.7E+02 0.0059 26.6 7.5 87 11-107 90-176 (346)
79 cd06395 PB1_Map2k5 PB1 domain 27.4 30 0.00064 25.8 0.8 42 6-54 25-66 (91)
80 PRK05728 DNA polymerase III su 24.3 4E+02 0.0086 21.8 8.3 104 52-163 14-119 (142)
81 PF15200 KRTDAP: Keratinocyte 24.2 52 0.0011 23.8 1.6 29 6-44 44-72 (77)
82 PF00254 FKBP_C: FKBP-type pep 24.0 84 0.0018 23.2 2.9 51 122-182 2-59 (94)
83 cd01666 TGS_DRG_C TGS_DRG_C: 23.8 2.9E+02 0.0064 20.1 5.7 53 71-133 21-73 (75)
84 PRK10945 gene expression modul 22.7 1.4E+02 0.0031 21.6 3.6 38 33-70 23-62 (72)
85 PF15187 Augurin: Oesophageal 22.6 22 0.00047 27.6 -0.6 32 249-280 38-72 (114)
86 PF00249 Myb_DNA-binding: Myb- 22.3 1.6E+02 0.0035 18.9 3.7 43 44-86 3-46 (48)
87 COG4858 Uncharacterized membra 21.2 5E+02 0.011 22.8 7.2 60 2-80 5-65 (226)
88 COG0414 PanC Panthothenate syn 20.8 1.9E+02 0.0042 26.8 4.9 50 146-199 187-237 (285)
No 1
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-43 Score=341.65 Aligned_cols=240 Identities=27% Similarity=0.394 Sum_probs=207.6
Q ss_pred HHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHH
Q psy16136 8 ALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY 87 (332)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~ 87 (332)
.-+..|++.+|+++|+ |+++.+.++|++||+.||+.||+|+++++.++.+++++++||+||.|+++.++..
T Consensus 127 ~~~~~l~~~~~~~~~~---------~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~ 197 (384)
T COG0006 127 AAFERLQAALPRAELV---------DASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYA 197 (384)
T ss_pred HHHHHHHhhCCCCEEe---------ccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Confidence 4467888889988888 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHH
Q psy16136 88 ILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAV 167 (332)
Q Consensus 88 ~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~ 167 (332)
+.+. |.+..+|.+||++|+|++.|||. |+++.+++||+|++|+|+.|+|||||+||||++ |+|+++|+++|+.+
T Consensus 198 ~~~~-G~~~~sf~~iv~~G~n~a~pH~~----~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V 271 (384)
T COG0006 198 LRKG-GAEGPSFDTIVASGENAALPHYT----PSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAV 271 (384)
T ss_pred HHHc-CCCccCcCcEEeccccccCcCCC----CCcccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHH
Confidence 9875 66767899999999999999975 499999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc--------cCCcccCccccccccceeEeeeccccCCceeeEeccCCc
Q psy16136 168 LSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL--------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGR 239 (332)
Q Consensus 168 ~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~--------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~ 239 (332)
+++|+++++++|||++++||+.++++++.++|+ |||+... - -.|=.|....++. ...+++||
T Consensus 272 ~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~--l------~vhE~p~~~~~~~--~~~L~~GM 341 (384)
T COG0006 272 LEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFV--L------DVHEHPQYLSPGS--DTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccCCccccCCCC--c------ccCcCccccCCCC--CccccCCc
Confidence 999999999999999999999999999999764 4444300 0 0111111111222 23478999
Q ss_pred EEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhh
Q psy16136 240 SILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 240 ~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
++++||++ | ..+.-+|++||++.||+++.+.||
T Consensus 342 v~t~Epg~---y---------------~~g~~GirIEd~vlVte~G~e~LT 374 (384)
T COG0006 342 VFSIEPGI---Y---------------IPGGGGVRIEDTVLVTEDGFEVLT 374 (384)
T ss_pred EEEecccc---c---------------cCCCceEEEEEEEEEcCCCceecc
Confidence 99999995 3 356778999999999999999998
No 2
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=2.4e-43 Score=345.13 Aligned_cols=245 Identities=31% Similarity=0.544 Sum_probs=208.5
Q ss_pred cchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCc
Q psy16136 32 IIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAV 111 (332)
Q Consensus 32 ~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~ 111 (332)
.|+.+++.++|+|||++||+.||+|+++++.++.++++.++||+||.||++.+.+.+.+. |....+|+++|++|.|++.
T Consensus 161 ~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~-G~~~~~~~~iv~~G~na~~ 239 (438)
T PRK10879 161 TDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRH-GARYPSYNTIVGSGENGCI 239 (438)
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC-CCCCCCCCcEEEEcCcccc
Confidence 389999999999999999999999999999999999999999999999999999988865 6666788999999999999
Q ss_pred ccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHH
Q psy16136 112 LHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLA 191 (332)
Q Consensus 112 ~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~ 191 (332)
+||. |++++|++||+|++|+|+.|+||++|+||||+++|+++++|+++|++++++++++++++|||+++++|++++
T Consensus 240 ~H~~----~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~ 315 (438)
T PRK10879 240 LHYT----ENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEV 315 (438)
T ss_pred ccCC----CCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 9975 589999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCcccCcccc---------ccccceeEeeeccccCCceee-----EeccCCcEEEEecCCCcccccccCC
Q psy16136 192 NKVVLSKLLDIGLLRGTIDE---------LMEESYFHWAFGVYEPDFYGV-----IEMTTGRSILFAPRLSEDYVVWMGQ 257 (332)
Q Consensus 192 ~~~l~~~g~ghGi~~~~~~~---------~~~~~~f~~~pGi~~pg~~g~-----~~~~~g~~ilf~P~~~~~~~iW~G~ 257 (332)
.+++.+....+||++++.+. .+.++.-|. .|++.+++... ..+++||++++||++ |.
T Consensus 316 ~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~-iGldvHd~~~~~~~~~~~L~~GmV~tvEPgi---Y~----- 386 (438)
T PRK10879 316 VRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHW-LGLDVHDVGVYGQDRSRILEPGMVLTVEPGL---YI----- 386 (438)
T ss_pred HHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccc-cCcCcCcCCCcCCCCCCcCCCCCEEEECCEE---EE-----
Confidence 99999888788886543322 233333344 36655443211 247899999999998 41
Q ss_pred CCChhHHHHHcCCceEEEcCcccchhhhhhhhhh
Q psy16136 258 LPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITA 291 (332)
Q Consensus 258 ~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~ 291 (332)
+....++.+|+..++++||+++||++|.+.||+
T Consensus 387 -~~~~~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 387 -APDADVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred -CCCcCcccccCccEEEeccEEEECCCcCeEcCc
Confidence 111234556766799999999999999999983
No 3
>KOG2414|consensus
Probab=100.00 E-value=3.1e-43 Score=325.12 Aligned_cols=245 Identities=26% Similarity=0.410 Sum_probs=225.2
Q ss_pred ccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCC
Q psy16136 31 LIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGA 110 (332)
Q Consensus 31 ~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~ 110 (332)
+..++.++.++|.||||+|+++||+||.|+++++...+-.-+++..|..+.+.++..+.. +|++..+|+|+|+.|.|+.
T Consensus 215 ~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~-rGad~~AYpPVVAgG~na~ 293 (488)
T KOG2414|consen 215 VRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRR-RGADRLAYPPVVAGGKNAN 293 (488)
T ss_pred cccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheee-cCccccccCCeeecCcccc
Confidence 347899999999999999999999999999999999999999999999999999999985 5888899999999999999
Q ss_pred cccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCC--CCchhhhh
Q psy16136 111 VLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKP--GVSWVDMH 188 (332)
Q Consensus 111 ~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rp--G~~~~di~ 188 (332)
.+||.. ++..++++|+|++|.||.++||++|+||||+++|++|+.|+++|+++++.|+.++..|+| |.+..+|+
T Consensus 294 tIHY~~----Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~ 369 (488)
T KOG2414|consen 294 TIHYVR----NNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLF 369 (488)
T ss_pred eEEEee----cccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHH
Confidence 999986 899999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhhcccCCcccCcc------ccccccceeEeeeccccCCc---eeeEeccCCcEEEEecCCCcccccccCCCC
Q psy16136 189 HLANKVVLSKLLDIGLLRGTI------DELMEESYFHWAFGVYEPDF---YGVIEMTTGRSILFAPRLSEDYVVWMGQLP 259 (332)
Q Consensus 189 ~a~~~~l~~~g~ghGi~~~~~------~~~~~~~~f~~~pGi~~pg~---~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p 259 (332)
..+.+.+.+.....||.+... +.+.++++-||+ |++++++ .+...+.+|++||+||++ | +|
T Consensus 370 ~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyL-GmDVHD~p~v~r~~pL~pg~ViTIEPGv---Y------IP 439 (488)
T KOG2414|consen 370 ERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYL-GMDVHDCPTVSRDIPLQPGMVITIEPGV---Y------IP 439 (488)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhc-CcccccCCCCCCCccCCCCceEEecCce---e------cC
Confidence 999999999988888754333 456677777886 9988664 455678999999999999 7 88
Q ss_pred ChhHHHHHcCCceEEEcCcccchhhhhhhhh
Q psy16136 260 TLDEYKEKYQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 260 ~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
..+.+++.|++.++|+||++.|++++-+.||
T Consensus 440 ~d~d~P~~FrGIGiRIEDDV~i~edg~evLT 470 (488)
T KOG2414|consen 440 EDDDPPEEFRGIGIRIEDDVAIGEDGPEVLT 470 (488)
T ss_pred ccCCCchHhcCceEEeecceEeccCCceeeh
Confidence 8889999999999999999999999998888
No 4
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=7.3e-41 Score=315.90 Aligned_cols=239 Identities=18% Similarity=0.254 Sum_probs=199.0
Q ss_pred HHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHH
Q psy16136 8 ALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY 87 (332)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~ 87 (332)
..+..|++.+|++.|+ |++++++++|+||||+||+.||+|+++++.++.++++.++||+||.|+++.++..
T Consensus 68 ~~~~~l~~~l~~~~~~---------d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~ 138 (323)
T PRK15173 68 GGKRVIDAVMPNVDFV---------DSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAA 138 (323)
T ss_pred HHHHHHHhhCCCCeEE---------EhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Confidence 4567788889998888 8999999999999999999999999999999999999999999999999999888
Q ss_pred HHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHH
Q psy16136 88 ILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAV 167 (332)
Q Consensus 88 ~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~ 167 (332)
+.+. |.....+.+++++|.+. .+|+ .|+++++++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+++
T Consensus 139 ~~~~-g~~~~~~~~~i~~G~~~-~~h~----~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~v-G~p~~~~~~~y~~v 211 (323)
T PRK15173 139 VMSK-SETHFSRFHLISVGADF-SPKL----IPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTI 211 (323)
T ss_pred HHHc-CCCCCCCCcEEEECCCC-ccCC----CCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEc-CCCCHHHHHHHHHH
Confidence 8764 44434444678888874 5773 5699999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc--------cCCcccCccccccccceeEeeeccccCCceeeEeccCCc
Q psy16136 168 LSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL--------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGR 239 (332)
Q Consensus 168 ~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~--------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~ 239 (332)
+++++++++++|||++++||++++++++++.|+ |||+...- -+|..|-+. ++.. ..+++||
T Consensus 212 ~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~l--------g~~E~P~i~-~~~~--~~Le~GM 280 (323)
T PRK15173 212 RTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFL--------GLEESPFVS-THAT--ESFTSGM 280 (323)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCC--------CcCCCCCCC-CCCC--CccCCCC
Confidence 999999999999999999999999999999863 46553200 011111111 1111 2368999
Q ss_pred EEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhhh
Q psy16136 240 SILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITA 291 (332)
Q Consensus 240 ~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~ 291 (332)
++++||++ | . ++..++++||++.||++|.+.||+
T Consensus 281 V~tiEPgi---y------~---------~g~ggvriEDtvlVTe~G~e~LT~ 314 (323)
T PRK15173 281 VLSLETPY---Y------G---------YNLGSIMIEDMILINKEGIEFLSK 314 (323)
T ss_pred EEEECCEE---E------c---------CCCcEEEEeeEEEEcCCcceeCCC
Confidence 99999998 4 1 234579999999999999999984
No 5
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=4.2e-41 Score=325.62 Aligned_cols=242 Identities=19% Similarity=0.273 Sum_probs=198.9
Q ss_pred HHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHH
Q psy16136 8 ALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY 87 (332)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~ 87 (332)
..+..|++.+|++.|+ |+++++.++|+|||++||++||+|++|+++++.++.+.++||+||.|+++.+.+.
T Consensus 131 ~~~~~l~~~l~~~~~~---------d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~ 201 (391)
T TIGR02993 131 AAFASLQKHLPNARFV---------DATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDA 201 (391)
T ss_pred HHHHHHHHhCCCCEEE---------ehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh
Confidence 4667788888988888 8999999999999999999999999999999999999999999999999998765
Q ss_pred HHHh---CCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHH
Q psy16136 88 ILYV---GGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIY 164 (332)
Q Consensus 88 ~~~~---~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~ 164 (332)
.... .|....+|.++++||+|++.+|+ .|+++++++||.|++|+|+.|+||++|+||||++ |+|+++|+++|
T Consensus 202 ~~~~~~~~g~~~~~~~~iv~sG~~~a~pH~----~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~ 276 (391)
T TIGR02993 202 GIRGVDGFGGDYPAIVPLLPSGADASAPHL----TWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAE 276 (391)
T ss_pred hhhcccCcCCCcCCcccccccCccccCCCC----CCCCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHH
Confidence 4321 23334566678999999999995 4699999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc------cCCcccCccccccccceeEeeeccccCCceeeEeccCC
Q psy16136 165 NAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTG 238 (332)
Q Consensus 165 ~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g 238 (332)
+.++++++++++++|||++++||++++++++++.|+ |||+.-.- .+..-...|.+ .++... .+++|
T Consensus 277 ~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~h~~GhgiGl~~-----~~~~~e~~~~l-~~~~~~--~L~~G 348 (391)
T TIGR02993 277 KAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKDSRTGYPIGLSY-----PPDWGERTMSL-RPGDNT--VLKPG 348 (391)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccCCCceeeeccCc-----CCCCCCccccc-cCCCCc--eecCC
Confidence 999999999999999999999999999999999864 44442110 00000000111 123222 36899
Q ss_pred cEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhh
Q psy16136 239 RSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 239 ~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
|++++||++ | .|+ + ++++||++.||++|.+.||
T Consensus 349 Mv~tvEpgi---y------~~~-------~---Gvried~v~VT~~G~e~Lt 381 (391)
T TIGR02993 349 MTFHFMTGL---W------MED-------W---GLEITESILITETGVECLS 381 (391)
T ss_pred CEEEEccee---E------eCC-------C---CeEEeeEEEECCCcceecc
Confidence 999999988 4 111 2 5899999999999999998
No 6
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=4.5e-41 Score=322.52 Aligned_cols=218 Identities=27% Similarity=0.371 Sum_probs=185.2
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCC
Q psy16136 37 IIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGH 116 (332)
Q Consensus 37 ~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~ 116 (332)
.+..+|+|||++||++||+|++|+++++..+.+.++||+||.|+++.+++.+.+. |+...+|+++++||+|++.||+
T Consensus 120 ~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~-G~~~~~f~~iv~sG~~~~~ph~-- 196 (361)
T PRK09795 120 TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQ-GAEKASFDTIVASGWRGALPHG-- 196 (361)
T ss_pred cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHC-CCCcCCCCeEEEEeccccccCC--
Confidence 4899999999999999999999999999999999999999999999999998865 7777889999999999999994
Q ss_pred CCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCC-CCHH---HHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHH
Q psy16136 117 ASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGK-FTEK---QAYIYNAVLSANRAVMEAAKPGVSWVDMHHLAN 192 (332)
Q Consensus 117 ~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~-~~~~---~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~ 192 (332)
.|++++|++||+|++|+|+.|+||++|+||||+++|+ ++++ ++++|++++++++++++++|||++++||+++++
T Consensus 197 --~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~ 274 (361)
T PRK09795 197 --KASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAAR 274 (361)
T ss_pred --CCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 5699999999999999999999999999999999443 3433 789999999999999999999999999999999
Q ss_pred HHHHhhcc--------cCCcccCccccccccceeEeeeccccCCceeeEeccCCcEEEEecCCCcccccccCCCCChhHH
Q psy16136 193 KVVLSKLL--------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEY 264 (332)
Q Consensus 193 ~~l~~~g~--------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~ 264 (332)
+++++.|+ |||+.-. +|=.|.+ .++... .+++||++++||++ | .|
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiGl~----------~he~p~i-~~~~~~--~l~~gmv~~iEpgi---y------~~----- 327 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIGIE----------VHEDPRF-SPRDTT--TLQPGMLLTVEPGI---Y------LP----- 327 (361)
T ss_pred HHHHHcCCCccCCCCCCccCCcc----------ccCCCCc-CCCCCC--CcCCCCEEEECCEE---E------eC-----
Confidence 99999874 4554210 1111222 122222 36899999999998 4 22
Q ss_pred HHHcCCceEEEcCcccchhhhhhhhh
Q psy16136 265 KEKYQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 265 ~~~~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
+..++++||++.||++|.+.||
T Consensus 328 ----~~~gvriEd~v~vt~~G~e~Lt 349 (361)
T PRK09795 328 ----GQGGVRIEDVVLVTPQGAEVLY 349 (361)
T ss_pred ----CCCEEEEeeEEEECCCCcEeCc
Confidence 2246999999999999999998
No 7
>KOG2737|consensus
Probab=100.00 E-value=1.5e-41 Score=310.99 Aligned_cols=253 Identities=49% Similarity=0.815 Sum_probs=219.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCccc
Q psy16136 34 YHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLH 113 (332)
Q Consensus 34 ~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h 113 (332)
+.+.+.+.|.|||+.||+.||.|++|++.++.++|++++||+.|.++.+.+++.....+|+...+|.+||+||+|+++.|
T Consensus 175 lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG~ns~vLH 254 (492)
T KOG2737|consen 175 LYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRHLSYTCICASGDNSAVLH 254 (492)
T ss_pred hhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccccccceeeecCCCcceee
Confidence 56899999999999999999999999999999999999999999999999999999999989999999999999999999
Q ss_pred CCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHH
Q psy16136 114 YGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANK 193 (332)
Q Consensus 114 ~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~ 193 (332)
|.|.+.||++.+|.||++++|+|+.|.+|.||+|++|+.+|+++++|+.+|++++.++.++++++|||+.+.|+|..+.+
T Consensus 255 Ygha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La~k 334 (492)
T KOG2737|consen 255 YGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLAEK 334 (492)
T ss_pred ccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHHHH
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCcccCcccccccc---------ceeEeeeccccCCceeeE------------------eccCCcEEEEecC
Q psy16136 194 VVLSKLLDIGLLRGTIDELMEE---------SYFHWAFGVYEPDFYGVI------------------EMTTGRSILFAPR 246 (332)
Q Consensus 194 ~l~~~g~ghGi~~~~~~~~~~~---------~~f~~~pGi~~pg~~g~~------------------~~~~g~~ilf~P~ 246 (332)
++-++...-||++++.+++++. +.-|. .|++.++++|.. .+++||++|+||+
T Consensus 335 vlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~-lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEPG 413 (492)
T KOG2737|consen 335 VLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHF-LGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPG 413 (492)
T ss_pred HHHHHHHhcCceeccHHHHHHhccCeeecccccccc-ccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecCC
Confidence 9999988888887776655433 33344 377777766653 1568999999999
Q ss_pred CCcccccccC-----CCCChhH-----HHHHc-CCceEEEcCcccchhhhhhhhh
Q psy16136 247 LSEDYVVWMG-----QLPTLDE-----YKEKY-QVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 247 ~~~~~~iW~G-----~~p~~e~-----~~~~~-~~~~v~~~~~i~it~~~~~~l~ 290 (332)
. |.|-.- .-|...+ .-++| +..+||+||++.||++|.|+||
T Consensus 414 c---YFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt 465 (492)
T KOG2737|consen 414 C---YFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLT 465 (492)
T ss_pred h---hHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecccccccc
Confidence 6 322110 0122111 12344 5788999999999999999998
No 8
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=2.6e-40 Score=321.30 Aligned_cols=239 Identities=18% Similarity=0.261 Sum_probs=198.6
Q ss_pred HHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHH
Q psy16136 8 ALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY 87 (332)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~ 87 (332)
..+..|++.+|+++|+ |+++++.++|+|||++||++||+|+++++++++++++.++||+||.||++.+.+.
T Consensus 151 ~~~~~l~~~lp~~~~~---------d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~ 221 (406)
T PRK14575 151 GGKRVIDAVMPNVDFV---------DSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAA 221 (406)
T ss_pred HHHHHHHHhCCCCeEE---------EcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 3456677788888888 8999999999999999999999999999999999999999999999999999888
Q ss_pred HHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHH
Q psy16136 88 ILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAV 167 (332)
Q Consensus 88 ~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~ 167 (332)
+.+. |.....+.+++.+|.+ ..+|+ .|+++++++||+|++|+|+.|+||++|+||||++ |+||++|+++|+++
T Consensus 222 ~~~~-g~~~~~~~~~v~~G~~-~~~h~----~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~~~~ 294 (406)
T PRK14575 222 VMSK-SETHFSRFHLISVGAD-FSPKL----IPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTI 294 (406)
T ss_pred HHHc-CCCcCCcCceEEECCC-cccCC----CCCCCcCCCCCEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHHHHH
Confidence 8765 4333344467889987 46784 5699999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc--------cCCcccCccccccccceeEeeeccccCCceeeEeccCCc
Q psy16136 168 LSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL--------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGR 239 (332)
Q Consensus 168 ~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~--------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~ 239 (332)
+++++++++++|||++++||++++++++++.|+ |||+...- -+|..|-+. ++... .+++||
T Consensus 295 ~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~l--------g~~e~P~i~-~~~~~--~Le~GM 363 (406)
T PRK14575 295 RTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFL--------GLEESPFVS-THATE--SFTSGM 363 (406)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCC--------CCccCCCCC-CCCCC--CcCCCC
Confidence 999999999999999999999999999999874 45553100 011112111 12222 368999
Q ss_pred EEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhhh
Q psy16136 240 SILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITA 291 (332)
Q Consensus 240 ~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~ 291 (332)
++++||++ | . ++..++++||++.||++|.+.||+
T Consensus 364 v~tiEpgi---y------~---------~g~gGvriEDtvlVT~~G~e~LT~ 397 (406)
T PRK14575 364 VLSLETPY---Y------G---------YNLGSIMIEDMILINKEGIEFLSK 397 (406)
T ss_pred EEEECCee---e------c---------CCCcEEEEEeEEEEcCCCcccCCC
Confidence 99999998 4 1 234579999999999999999983
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=5e-40 Score=319.23 Aligned_cols=240 Identities=16% Similarity=0.203 Sum_probs=200.3
Q ss_pred HHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHH
Q psy16136 9 LLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYI 88 (332)
Q Consensus 9 ~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~ 88 (332)
.+.+|++.+|+++|+ |+++++.++|+|||++||++||+|++++++++.++++.++||+||.||++.++..+
T Consensus 151 ~~~~l~~~~~~~~~v---------d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~ 221 (405)
T PRK14576 151 GKGVLDKVAPGLKLV---------DSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAV 221 (405)
T ss_pred HHHHHHhhCCCCeEE---------EcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 456677788888888 89999999999999999999999999999999999999999999999999999988
Q ss_pred HHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHH
Q psy16136 89 LYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVL 168 (332)
Q Consensus 89 ~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~ 168 (332)
.+. |....++.+++++|+|+ .+|+ .|+++++++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+++.
T Consensus 222 ~~~-g~~~~~~~~~v~~G~~~-~~h~----~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~~~~~~ 294 (405)
T PRK14576 222 MSF-PETNFSRFNLISVGDNF-SPKI----IADTTPAKVGDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQIYDTIR 294 (405)
T ss_pred HHc-CCCcCCCCCEEEECCcc-cCCC----CCCCcccCCCCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHHHHHHH
Confidence 865 43333444789999994 5884 4699999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc--------cCCcccCccccccccceeEeeeccccCCceeeEeccCCcE
Q psy16136 169 SANRAVMEAAKPGVSWVDMHHLANKVVLSKLL--------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRS 240 (332)
Q Consensus 169 ~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~--------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ 240 (332)
++++++++++|||++++||++++++++.+.|+ |||+...- -+|-.|.+ .++... .+++||+
T Consensus 295 ~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l--------~~~e~P~i-~~~~~~--~Le~GMv 363 (405)
T PRK14576 295 TGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFL--------GLEEVPFV-STQATE--TFCPGMV 363 (405)
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCC--------CcCcCCCc-CCCCCC--ccCCCCE
Confidence 99999999999999999999999999999873 46653110 01111221 122222 3689999
Q ss_pred EEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhhhcc
Q psy16136 241 ILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKE 293 (332)
Q Consensus 241 ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~~~ 293 (332)
++++|++ | . .|..++++||++.||++|.+.||+-+
T Consensus 364 ~~vEp~~---y------~---------~g~ggvriEDtvlVTe~G~e~LT~~p 398 (405)
T PRK14576 364 LSLETPY---Y------G---------IGVGSIMLEDMILITDSGFEFLSKLD 398 (405)
T ss_pred EEECCce---e------e---------cCCCEEEEeeEEEECCCccccCCCCC
Confidence 9999976 3 1 14568999999999999999999443
No 10
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.1e-39 Score=318.89 Aligned_cols=249 Identities=24% Similarity=0.353 Sum_probs=199.6
Q ss_pred cchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCc
Q psy16136 32 IIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAV 111 (332)
Q Consensus 32 ~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~ 111 (332)
.++.+.+.++|+|||++||+.||+|+++++++++++++.++||+||.|+++.+.... ..+....+|++++++|+|+++
T Consensus 149 ~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~--~~~~~~~~y~~iva~G~naa~ 226 (443)
T PRK13607 149 KGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT--GQRDNDVPYGNIVALNEHAAV 226 (443)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh--CCCCcCCCCCcEEEecCcceE
Confidence 468899999999999999999999999999999999999999999999998775442 224445789999999999999
Q ss_pred ccCCCCCCCCC-cccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHH
Q psy16136 112 LHYGHASAPND-KRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHL 190 (332)
Q Consensus 112 ~h~~~~~~p~~-r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a 190 (332)
+||.+ ++ +.+++||+|++|+|+.++||+||+||||+ |+++++++++|++++++++++++++|||++++||+.+
T Consensus 227 ~H~~~----~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~a 300 (443)
T PRK13607 227 LHYTK----LDHQAPAEMRSFLIDAGAEYNGYAADITRTYA--AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQ 300 (443)
T ss_pred ecCCc----cCCCCCCCCCEEEEEeeEEECCEEecceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHH
Confidence 99754 65 46899999999999999999999999997 6789999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCcccC-cccc---------ccccceeEeeeccccCCceee---------------------EeccCCc
Q psy16136 191 ANKVVLSKLLDIGLLRG-TIDE---------LMEESYFHWAFGVYEPDFYGV---------------------IEMTTGR 239 (332)
Q Consensus 191 ~~~~l~~~g~ghGi~~~-~~~~---------~~~~~~f~~~pGi~~pg~~g~---------------------~~~~~g~ 239 (332)
+++++.+....+|++++ +.+. .++++.-|.. |++.++.++. ..+++||
T Consensus 301 a~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~i-GldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~Gm 379 (443)
T PRK13607 301 MHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPL-GLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGM 379 (443)
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCcc-CcccccCCCcccccccccccccccccccccCCcCCCCc
Confidence 99999888777787753 2222 3344444543 6666554321 2478999
Q ss_pred EEEEecCCCccccc------ccC----CCCChhHHHHHcCCceEEEcCcccchhhhhhhhhhc
Q psy16136 240 SILFAPRLSEDYVV------WMG----QLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAK 292 (332)
Q Consensus 240 ~ilf~P~~~~~~~i------W~G----~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~~ 292 (332)
++|+||++ |.+ |.. .-.+.+.+.+-.++.+||+||+++||++|.+.||+.
T Consensus 380 V~TvEPGi---Y~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~~ 439 (443)
T PRK13607 380 VLTIEPGL---YFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTRD 439 (443)
T ss_pred EEEECCee---eeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECChh
Confidence 99999998 432 110 001112222223566999999999999999999955
No 11
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.4e-39 Score=312.16 Aligned_cols=233 Identities=19% Similarity=0.317 Sum_probs=194.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCC----CCCcceeeeCCCCCcc
Q psy16136 37 IIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRH----VAYTCICASGGNGAVL 112 (332)
Q Consensus 37 ~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~----~~~~~iv~sG~n~~~~ 112 (332)
.+++.|+|||++||+.||+|+++++++++.+++.++||+||.||++.++..+.++++... ..|+..+.+|.|..++
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~ 209 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVIC 209 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccccccc
Confidence 455679999999999999999999999999999999999999999999999887755432 3467777788999999
Q ss_pred cCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHH
Q psy16136 113 HYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLAN 192 (332)
Q Consensus 113 h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~ 192 (332)
| +.|++++|++||+|++|+|+.++||++|++|||++ |+++++++++|++++++++++++++|||++++||+++++
T Consensus 210 H----gip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~ 284 (396)
T PLN03158 210 H----GIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVIN 284 (396)
T ss_pred C----CCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 9 56799999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHhhc-------ccCCcccCccccccccceeEeeeccccC---CceeeEeccCCcEEEEecCCCc---ccccccCCCC
Q psy16136 193 KVVLSKL-------LDIGLLRGTIDELMEESYFHWAFGVYEP---DFYGVIEMTTGRSILFAPRLSE---DYVVWMGQLP 259 (332)
Q Consensus 193 ~~l~~~g-------~ghGi~~~~~~~~~~~~~f~~~pGi~~p---g~~g~~~~~~g~~ilf~P~~~~---~~~iW~G~~p 259 (332)
+++.+.| +||||.. .||=.|.+.+. ...+ .+++||+|++||++.. ...+|..
T Consensus 285 ~~~~~~G~~~v~~~~GHGIG~----------~~He~P~i~~~~~~~~~~--~l~~GMVfTIEP~i~~g~~~~~~~~d--- 349 (396)
T PLN03158 285 RHATMSGLSVVKSYCGHGIGE----------LFHCAPNIPHYARNKAVG--VMKAGQVFTIEPMINAGVWRDRMWPD--- 349 (396)
T ss_pred HHHHHcCCCccCCccCCcccc----------ccCCCCCCCcccCCCCCC--EecCCcEEEECCeeccCcccceecCC---
Confidence 9999986 4788742 13433433221 1113 3789999999999854 3445532
Q ss_pred ChhHHHHH--cCCceEEEcCcccchhhhhhhhhhc
Q psy16136 260 TLDEYKEK--YQVDEVYFSDEVMYSRAYLHDITAK 292 (332)
Q Consensus 260 ~~e~~~~~--~~~~~v~~~~~i~it~~~~~~l~~~ 292 (332)
.|... -|..++++||+|+||++|.|.||++
T Consensus 350 ---~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~~ 381 (396)
T PLN03158 350 ---GWTAVTADGKRSAQFEHTLLVTETGVEVLTAR 381 (396)
T ss_pred ---CceEEecCCceeeEeeeEEEEeCCcceECCCC
Confidence 23221 2456789999999999999999954
No 12
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.2e-38 Score=290.71 Aligned_cols=224 Identities=18% Similarity=0.223 Sum_probs=183.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC-----CCCCcceeeeCCCCCcccCCCC
Q psy16136 43 VIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR-----HVAYTCICASGGNGAVLHYGHA 117 (332)
Q Consensus 43 ~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~-----~~~~~~iv~sG~n~~~~h~~~~ 117 (332)
.||||+||++||+|+++++++++++++.++||+||.||++.+++.+.+. |.. ..+|++++.+|+|+..+|+.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~i~~g~n~~~~H~~-- 79 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKH-GATSEQKGYNGYPYAICASVNDEMCHAF-- 79 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCcceEeccCCEeecCC--
Confidence 6899999999999999999999999999999999999999999999865 443 24677778889999999964
Q ss_pred CCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHh
Q psy16136 118 SAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLS 197 (332)
Q Consensus 118 ~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~ 197 (332)
|++++|++||+|++|+|+.++||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++++++++
T Consensus 80 --p~~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~ 156 (248)
T PRK12897 80 --PADVPLTEGDIVTIDMVVNLNGGLSDSAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVAN 156 (248)
T ss_pred --CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Confidence 599999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred hc-------ccCCcccCccccccccceeEeeeccc--c-CCceeeEeccCCcEEEEecCCCc---ccccccCCCCChhHH
Q psy16136 198 KL-------LDIGLLRGTIDELMEESYFHWAFGVY--E-PDFYGVIEMTTGRSILFAPRLSE---DYVVWMGQLPTLDEY 264 (332)
Q Consensus 198 ~g-------~ghGi~~~~~~~~~~~~~f~~~pGi~--~-pg~~g~~~~~~g~~ilf~P~~~~---~~~iW~G~~p~~e~~ 264 (332)
.| +|||+... +|=.|.+. . ++... .+++||++++||.+.. .+.+| .+.|
T Consensus 157 ~g~~~~~~~~GHgiGl~----------~hE~P~i~~~~~~~~~~--~l~~Gmv~tiEP~~~~~~~~~~~~------~~~~ 218 (248)
T PRK12897 157 EGFSVARDFTGHGIGKE----------IHEEPAIFHFGKQGQGP--ELQEGMVITIEPIVNVGMRYSKVD------LNGW 218 (248)
T ss_pred cCCccCCCeEECccCCc----------ccCCCccCCCCCCCCCC--CcCCCCEEEECCeEecCCCceEEC------CCCc
Confidence 86 56776321 11112211 1 12112 3689999999999831 11111 1233
Q ss_pred HHH--cCCceEEEcCcccchhhhhhhhh
Q psy16136 265 KEK--YQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 265 ~~~--~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
..+ -|..++++||++.||+++.+.||
T Consensus 219 ~~~~~~g~~g~r~edtv~Vt~~G~e~lt 246 (248)
T PRK12897 219 TARTMDGKLSAQYEHTIAITKDGPIILT 246 (248)
T ss_pred EEEcCCCCeEeecceEEEEeCCccEEee
Confidence 322 35678999999999999999888
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.1e-38 Score=294.66 Aligned_cols=237 Identities=14% Similarity=0.177 Sum_probs=183.2
Q ss_pred hHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC-------CCCCcceeee
Q psy16136 34 YHGIIRYSRV-IKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR-------HVAYTCICAS 105 (332)
Q Consensus 34 ~~~~i~~lR~-iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~-------~~~~~~iv~s 105 (332)
..+.++++|. |||++||+.||+|++|++++++++++.++||+||.||++.++..+.+. |.. ..+|++++.+
T Consensus 32 ~~~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~-G~~~~~~~~~~~~f~~~v~~ 110 (291)
T PRK12318 32 KQLYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEY-NAIPAPLNYGSPPFPKTICT 110 (291)
T ss_pred chhccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCccccccCCCCCCcceEe
Confidence 4567777777 999999999999999999999999999999999999999888777654 431 2357778889
Q ss_pred CCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchh
Q psy16136 106 GGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWV 185 (332)
Q Consensus 106 G~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~ 185 (332)
|.|+.++|+ .|+++++++||+|++|+|+.++||++|++|||++ |+++++|+++|+++.++++++++.+|||++++
T Consensus 111 g~n~~~~H~----~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~ 185 (291)
T PRK12318 111 SLNEVICHG----IPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKPGIPLY 185 (291)
T ss_pred eccceeecC----CCCCCccCCCCEEEEEEeEEECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 999999995 5699999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhc-------ccCCcccCccccccccceeEeeeccc--cCCceeeEeccCCcEEEEecCCCcccccccC
Q psy16136 186 DMHHLANKVVLSKL-------LDIGLLRGTIDELMEESYFHWAFGVY--EPDFYGVIEMTTGRSILFAPRLSEDYVVWMG 256 (332)
Q Consensus 186 di~~a~~~~l~~~g-------~ghGi~~~~~~~~~~~~~f~~~pGi~--~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G 256 (332)
||++++++++++.| .||||.-. +|=.|-+. .++... .+++||+|++||.+.... |.|
T Consensus 186 dv~~a~~~~~~~~G~~~~~~~~GHgIGl~----------~hE~P~i~~~~~~~~~--~L~~GMV~~iEP~i~~~~--~~g 251 (291)
T PRK12318 186 EIGEVIENCADKYGFSVVDQFVGHGVGIK----------FHENPYVPHHRNSSKI--PLAPGMIFTIEPMINVGK--KEG 251 (291)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCcCcc----------ccCCCcccCcCCCCCC--EeCCCCEEEECCEEEcCC--Cce
Confidence 99999999999886 45666311 01001110 111111 256777777777762211 111
Q ss_pred CCCChhHHH--HHcCCceEEEcCcccchhhhhhhhh
Q psy16136 257 QLPTLDEYK--EKYQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 257 ~~p~~e~~~--~~~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
-......|. -.-+..++++||++.||++|.+.||
T Consensus 252 ~~~~~~~~~~~~~~g~~~~~~edtv~VTe~G~e~LT 287 (291)
T PRK12318 252 VIDPINHWEARTCDNQPSAQWEHTILITETGYEILT 287 (291)
T ss_pred EEecCCCcEEEecCCCeeeeeeeEEEEcCCcceeCC
Confidence 000001111 1124567899999999999999998
No 14
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=4.2e-38 Score=291.30 Aligned_cols=231 Identities=16% Similarity=0.152 Sum_probs=182.7
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCC------C--CCCCCcceeeeCCCCCcccC
Q psy16136 43 VIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGG------S--RHVAYTCICASGGNGAVLHY 114 (332)
Q Consensus 43 ~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g------~--~~~~~~~iv~sG~n~~~~h~ 114 (332)
.+||++||+.||+|++|+++++.++++.++||+||.||++.+++.+.+.+. . ...+|++++++|.|+..+|+
T Consensus 3 ~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H~ 82 (286)
T PRK07281 3 TLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAHA 82 (286)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccCC
Confidence 689999999999999999999999999999999999999999998876532 1 12578899999999999995
Q ss_pred CCCCCCCCcccCCCCeEEEEecc---------------------------eeCCeeeceeeEEEeCCCCCHHHHHHHHHH
Q psy16136 115 GHASAPNDKRVNDGDMLVFDMGS---------------------------SYCGYASDITCSYPVNGKFTEKQAYIYNAV 167 (332)
Q Consensus 115 ~~~~~p~~r~l~~Gd~v~iD~g~---------------------------~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~ 167 (332)
.|++++|++||+|++|+|+ .|+||++|++|||.+ |+++++|+++|+++
T Consensus 83 ----~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~~~ 157 (286)
T PRK07281 83 ----FPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMDVT 157 (286)
T ss_pred ----CCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHHHH
Confidence 5699999999999999997 489999999999988 99999999999999
Q ss_pred HHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc-------ccCCcccCccccccccceeEeeecc---ccCCceeeEeccC
Q psy16136 168 LSANRAVMEAAKPGVSWVDMHHLANKVVLSKL-------LDIGLLRGTIDELMEESYFHWAFGV---YEPDFYGVIEMTT 237 (332)
Q Consensus 168 ~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g-------~ghGi~~~~~~~~~~~~~f~~~pGi---~~pg~~g~~~~~~ 237 (332)
+++++++++.+|||++++||++++++++++.| +||||...- |=.|-+ ..++... .+++
T Consensus 158 ~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~----------hE~P~i~~~~~~~~~~--~Le~ 225 (286)
T PRK07281 158 KEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTM----------HEEPMVPNYGTAGRGL--RLRE 225 (286)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCcc----------CCCCcCCCcccCCCCC--EECC
Confidence 99999999999999999999999999999875 456663211 101111 0122222 3689
Q ss_pred CcEEEEecCCCcccccccCCCCChhHHH--HHcCCceEEEcCcccchhhhhhhhhhc
Q psy16136 238 GRSILFAPRLSEDYVVWMGQLPTLDEYK--EKYQVDEVYFSDEVMYSRAYLHDITAK 292 (332)
Q Consensus 238 g~~ilf~P~~~~~~~iW~G~~p~~e~~~--~~~~~~~v~~~~~i~it~~~~~~l~~~ 292 (332)
||++++||++.... |.=.....+.|. ..-+..++++||+++||+++.+.||+.
T Consensus 226 GMV~tiEPgiy~~~--~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~ 280 (286)
T PRK07281 226 GMVLTIEPMINTGT--WEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQ 280 (286)
T ss_pred CCEEEECCeeEcCC--cceecccCCCceEEecCCCcEEEeccEEEEeCCcceECCCC
Confidence 99999999983210 000000011121 122567799999999999999999843
No 15
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=7.1e-38 Score=285.35 Aligned_cols=227 Identities=20% Similarity=0.262 Sum_probs=181.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCC-----CCCcceeeeCCCCCcccCCCC
Q psy16136 43 VIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRH-----VAYTCICASGGNGAVLHYGHA 117 (332)
Q Consensus 43 ~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~-----~~~~~iv~sG~n~~~~h~~~~ 117 (332)
+|||++||++||+|++|++++++++++.++||+||.|+++.+++.+.+. |... ..|++++.+|.|+..+|+
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~H~--- 77 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKH-GAKPAFLGYYGFPGSVCISVNEVVIHG--- 77 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC-CCCccccCCCCCCceeEeccccEEEec---
Confidence 6999999999999999999999999999999999999999999988865 4331 346677888899999996
Q ss_pred CCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHh
Q psy16136 118 SAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLS 197 (332)
Q Consensus 118 ~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~ 197 (332)
.|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++.+|||++++||++++++++.+
T Consensus 78 -~~~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 155 (247)
T TIGR00500 78 -IPDKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEA 155 (247)
T ss_pred -CCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4599999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred hc-------ccCCcccCccccccccceeEeeecc--c-cCCceeeEeccCCcEEEEecCCCcc---cccccCCCCChhHH
Q psy16136 198 KL-------LDIGLLRGTIDELMEESYFHWAFGV--Y-EPDFYGVIEMTTGRSILFAPRLSED---YVVWMGQLPTLDEY 264 (332)
Q Consensus 198 ~g-------~ghGi~~~~~~~~~~~~~f~~~pGi--~-~pg~~g~~~~~~g~~ilf~P~~~~~---~~iW~G~~p~~e~~ 264 (332)
.| +|||+...-.+ .|.+ + .++. -..+++||++++||.+... ...|. .-...
T Consensus 156 ~g~~~~~~~~GHgiG~~~~e----------~p~i~~~~~~~~--~~~l~~gmv~~iEp~i~~~~~~~~~~~----~~~~~ 219 (247)
T TIGR00500 156 KGFSVVREYCGHGIGRKFHE----------EPQIPNYGKKFT--NVRLKEGMVFTIEPMVNTGTEEITTAA----DGWTV 219 (247)
T ss_pred cCCEeccCccCCccCcccCC----------CCccCCcCcCCC--CCEecCCCEEEEeeEEEcCCCcEEECC----CCCEE
Confidence 86 46776321110 1111 0 0111 1236788888888876211 01111 00112
Q ss_pred HHHcCCceEEEcCcccchhhhhhhhhh
Q psy16136 265 KEKYQVDEVYFSDEVMYSRAYLHDITA 291 (332)
Q Consensus 265 ~~~~~~~~v~~~~~i~it~~~~~~l~~ 291 (332)
+.+.+..++++||+++||+++.+.||+
T Consensus 220 ~~~~~~~g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 220 KTKDGSLSAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred EccCCCeEEEEeEEEEEcCCccEEccC
Confidence 234567889999999999999998884
No 16
>KOG2738|consensus
Probab=100.00 E-value=1.5e-37 Score=276.87 Aligned_cols=229 Identities=18% Similarity=0.289 Sum_probs=199.2
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCC----CCCc-ceeeeCCCCCcccCCC
Q psy16136 42 RVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRH----VAYT-CICASGGNGAVLHYGH 116 (332)
Q Consensus 42 R~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~----~~~~-~iv~sG~n~~~~h~~~ 116 (332)
-.|++++||+.||+|++++.+.++.+...++||+|..||...+++++.+++++++ ..|+ ++|.| .|.+++|
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTS-VNEviCH--- 189 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTS-VNEVICH--- 189 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcc-hhheeec---
Confidence 3578999999999999999999999999999999999999999999998766543 3455 56766 9999999
Q ss_pred CCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHH
Q psy16136 117 ASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVL 196 (332)
Q Consensus 117 ~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~ 196 (332)
|+|+.|+|++||+|.||+...++|||+|+++||++ |+.+++.+++.+...++.+.+|+.+|||+++.+|.+.+.+...
T Consensus 190 -GIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~ 267 (369)
T KOG2738|consen 190 -GIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHAT 267 (369)
T ss_pred -CCCCcCcCCCCCEEeEEEEEEeccccCccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhh
Confidence 89999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhc-------ccCCcccCccccccccceeEeeeccccCCce-eeEeccCCcEEEEecCCCc---ccccccCCCCChhHHH
Q psy16136 197 SKL-------LDIGLLRGTIDELMEESYFHWAFGVYEPDFY-GVIEMTTGRSILFAPRLSE---DYVVWMGQLPTLDEYK 265 (332)
Q Consensus 197 ~~g-------~ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~-g~~~~~~g~~ilf~P~~~~---~~~iW~G~~p~~e~~~ 265 (332)
++| .||||. ..||-.|.++|.... ....|.+|++||+||+++. +.++|.+ .|.
T Consensus 268 ~~g~sVVr~ycGHGig----------~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD------~WT 331 (369)
T KOG2738|consen 268 KNGYSVVRSYCGHGIG----------RVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPD------DWT 331 (369)
T ss_pred hcCceeehhhhccccc----------cccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCC------Cce
Confidence 987 589985 368888888774321 2223789999999999975 5566643 333
Q ss_pred HH--cCCceEEEcCcccchhhhhhhhhhc
Q psy16136 266 EK--YQVDEVYFSDEVMYSRAYLHDITAK 292 (332)
Q Consensus 266 ~~--~~~~~v~~~~~i~it~~~~~~l~~~ 292 (332)
.. -|...+|||++|+||++|.|.||++
T Consensus 332 ~vTaDG~~sAQFEhTlLVT~tG~EILT~r 360 (369)
T KOG2738|consen 332 AVTADGKRSAQFEHTLLVTETGCEILTKR 360 (369)
T ss_pred EEecCCceecceeeEEEEecccceehhcc
Confidence 22 2567899999999999999999965
No 17
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=5.1e-37 Score=280.84 Aligned_cols=229 Identities=21% Similarity=0.214 Sum_probs=185.6
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC-----CCCCcceeeeCCCCCcccCC
Q psy16136 41 SRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR-----HVAYTCICASGGNGAVLHYG 115 (332)
Q Consensus 41 lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~-----~~~~~~iv~sG~n~~~~h~~ 115 (332)
+++|||++||++||+|++++++++.++++.++||+||.||++.+.+.+.+. |.. ...|++.+.+|.|...+|+
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~h~- 84 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEH-GAIPSPEGYYGFPGSTCISVNEEVAHG- 84 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHC-CCEeCcccCCCCCcceEecCCCeeEec-
Confidence 457999999999999999999999999999999999999999999988865 443 2346666777889888995
Q ss_pred CCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHH
Q psy16136 116 HASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVV 195 (332)
Q Consensus 116 ~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l 195 (332)
.|++++|++||+|++|+|+.|+||++|++|||++ |+++++++++|++++++++++++.+|||++++||++++++++
T Consensus 85 ---~p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 160 (255)
T PRK12896 85 ---IPGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFA 160 (255)
T ss_pred ---CCCCccCCCCCEEEEEEeEEECcEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred Hhhc-------ccCCcccCccccccccceeEeeecc---c-cCCceeeEeccCCcEEEEecCCCc---ccccccCCCCCh
Q psy16136 196 LSKL-------LDIGLLRGTIDELMEESYFHWAFGV---Y-EPDFYGVIEMTTGRSILFAPRLSE---DYVVWMGQLPTL 261 (332)
Q Consensus 196 ~~~g-------~ghGi~~~~~~~~~~~~~f~~~pGi---~-~pg~~g~~~~~~g~~ilf~P~~~~---~~~iW~G~~p~~ 261 (332)
++.| +|||+... +|-.|.+ + .++.. ..+++||+++++|.+.. ++..|+..
T Consensus 161 ~~~G~~~~~~~~GHgiG~~----------~he~p~~~~~~~~~~~~--~~le~GmV~~iEp~i~~g~~~~~~~~~~---- 224 (255)
T PRK12896 161 KKNGYSVVRDLTGHGVGRS----------LHEEPSVILTYTDPLPN--RLLRPGMTLAVEPFLNLGAKDAETLDDG---- 224 (255)
T ss_pred HHcCCEeccCcccCCcCcc----------cccCCCccccCCCCCCC--CEecCCcEEEEeceEEcCCCceEEcCCC----
Confidence 9987 45666321 1111111 0 12222 24689999999998842 33344321
Q ss_pred hHHHHHcCCceEEEcCcccchhhhhhhhhh
Q psy16136 262 DEYKEKYQVDEVYFSDEVMYSRAYLHDITA 291 (332)
Q Consensus 262 e~~~~~~~~~~v~~~~~i~it~~~~~~l~~ 291 (332)
..+..+.+..++++||+++||+++.+.||+
T Consensus 225 ~~~~~~~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 225 WTVVTPDKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred CEEEecCCCeEEEEEEEEEEcCCcceecCC
Confidence 111234467789999999999999999983
No 18
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2.9e-36 Score=275.42 Aligned_cols=232 Identities=20% Similarity=0.214 Sum_probs=183.4
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC----CCCCcceeeeCCCCCcccCCCC
Q psy16136 42 RVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR----HVAYTCICASGGNGAVLHYGHA 117 (332)
Q Consensus 42 R~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~----~~~~~~iv~sG~n~~~~h~~~~ 117 (332)
-+|||++||+.||+|+++++++++++++.++||+||.|+++.+...+.+.++.. ...|++++.+|.|+..+|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~--- 79 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHG--- 79 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecC---
Confidence 369999999999999999999999999999999999999999988888653321 2356667888999999995
Q ss_pred CCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHh
Q psy16136 118 SAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLS 197 (332)
Q Consensus 118 ~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~ 197 (332)
.|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++++++++
T Consensus 80 -~~~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~ 157 (252)
T PRK05716 80 -IPSDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEA 157 (252)
T ss_pred -CCCCcccCCCCEEEEEEEEEECCEEEEeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4599999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred hc-------ccCCcccCccccccccceeEeeeccccCCceeeEeccCCcEEEEecCCCcc---cccccCCCCChhHHHHH
Q psy16136 198 KL-------LDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSED---YVVWMGQLPTLDEYKEK 267 (332)
Q Consensus 198 ~g-------~ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~---~~iW~G~~p~~e~~~~~ 267 (332)
.| +|||+.....+.. ....+ ..++... .+++||+++++|.+... +..|... .....+
T Consensus 158 ~g~~~~~~~~GHgiG~~~~e~p---~~~~~----~~~~~~~--~le~Gmv~~vEp~i~~~~~~~~~~~~~----~~~~~~ 224 (252)
T PRK05716 158 EGFSVVREYCGHGIGRKFHEEP---QIPHY----GAPGDGP--VLKEGMVFTIEPMINAGKREVKTLKDG----WTVVTK 224 (252)
T ss_pred cCCeeecCccccccCCccCCCC---ccCcC----CCCCCCC--EecCCCEEEEccEEEcCCCceEEcCCC----CEEEcc
Confidence 86 4677632211110 00000 0122222 36899999999987321 1222211 011123
Q ss_pred cCCceEEEcCcccchhhhhhhhhh
Q psy16136 268 YQVDEVYFSDEVMYSRAYLHDITA 291 (332)
Q Consensus 268 ~~~~~v~~~~~i~it~~~~~~l~~ 291 (332)
.+..+++++|++.||++|.+.||.
T Consensus 225 ~g~~g~~~ed~v~Vt~~G~e~Lt~ 248 (252)
T PRK05716 225 DGSLSAQYEHTVAVTEDGPEILTL 248 (252)
T ss_pred CCCcEEeeeeEEEEcCCccEEeeC
Confidence 466789999999999999999983
No 19
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.2e-35 Score=267.51 Aligned_cols=212 Identities=17% Similarity=0.194 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCC------cceeeeCCCCCcccCCCCCCCCCc
Q psy16136 50 LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAY------TCICASGGNGAVLHYGHASAPNDK 123 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~------~~iv~sG~n~~~~h~~~~~~p~~r 123 (332)
|++||+|++|++++++++++.++||+||.||++.+.+.+.+. |....++ .+++++|+|+..+|+ .|+++
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~-ga~~~~~~~~~~~~~~v~~G~~~~~~H~----~~~~r 75 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVRE-IAKTFPEVELMDTWTWFQSGINTDGAHN----PVTNR 75 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCCcccccCcceEEEeeccccccCC----CCCCc
Confidence 689999999999999999999999999999999998888865 4332222 257899999999995 46999
Q ss_pred ccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc----
Q psy16136 124 RVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL---- 199 (332)
Q Consensus 124 ~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g---- 199 (332)
++++||+|++|+|+.++||++|++|||++ |+++++|+++|+++.++++++++++|||++++||+++++++++++|
T Consensus 76 ~l~~GD~v~~d~g~~~~GY~ad~~RT~~v-G~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~ 154 (228)
T cd01090 76 KVQRGDILSLNCFPMIAGYYTALERTLFL-DEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRY 154 (228)
T ss_pred ccCCCCEEEEEEeEEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999 9999999999999999999999999999999999999999999986
Q ss_pred ----ccCCcccCccccccccceeEeeecccc-CCceeeEeccCCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEE
Q psy16136 200 ----LDIGLLRGTIDELMEESYFHWAFGVYE-PDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVY 274 (332)
Q Consensus 200 ----~ghGi~~~~~~~~~~~~~f~~~pGi~~-pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~ 274 (332)
+|||+...-.+ ..+ ..|... ++.. ..+++||++++||.+ | .|. ..-+..+++
T Consensus 155 ~~~~~GHgiGl~~he------~~~-~~g~~~~~~~~--~~Le~GMV~~iEP~i---~------~~~-----~~~g~gG~r 211 (228)
T cd01090 155 RTFGYGHSFGVLSHY------YGR-EAGLELREDID--TVLEPGMVVSMEPMI---M------LPE-----GQPGAGGYR 211 (228)
T ss_pred cccccCccccccccc------CCC-ccccccCCCCC--CccCCCCEEEECCEE---e------ecc-----cCCCCcEEE
Confidence 46666311000 000 011122 2222 236899999999998 3 110 012456899
Q ss_pred EcCcccchhhhhhhhh
Q psy16136 275 FSDEVMYSRAYLHDIT 290 (332)
Q Consensus 275 ~~~~i~it~~~~~~l~ 290 (332)
++|++.||+++.+.||
T Consensus 212 ied~v~Vt~~G~e~Lt 227 (228)
T cd01090 212 EHDILVINENGAENIT 227 (228)
T ss_pred eeeEEEECCCccccCc
Confidence 9999999999998886
No 20
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.6e-35 Score=269.27 Aligned_cols=225 Identities=37% Similarity=0.636 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCC
Q psy16136 50 LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGD 129 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd 129 (332)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+. |.. .+|++++++|+|+..+|+ .|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~-G~~-~~~~~~v~~g~~~~~~H~----~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSR-GAR-LAYSYIVAAGSNAAILHY----VHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCC-cCCCCeEEECCCccccCC----CcCCCcCCCCC
Confidence 679999999999999999999999999999999999998876 544 567889999999999995 45899999999
Q ss_pred eEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcccCCcccCc-
Q psy16136 130 MLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGT- 208 (332)
Q Consensus 130 ~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~ghGi~~~~- 208 (332)
+|++|+|+.|+||++|++|||+++|+++++|+++|+++.++++++++++|||++++||++++++++++.+.++|+....
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 9999999999999999999999867999999999999999999999999999999999999999999887766664321
Q ss_pred --------cccccccceeEeeeccccCC-------ceeeEeccCCcEEEEecCCC-cccccccCCCCChhHHHHHcCCce
Q psy16136 209 --------IDELMEESYFHWAFGVYEPD-------FYGVIEMTTGRSILFAPRLS-EDYVVWMGQLPTLDEYKEKYQVDE 272 (332)
Q Consensus 209 --------~~~~~~~~~f~~~pGi~~pg-------~~g~~~~~~g~~ilf~P~~~-~~~~iW~G~~p~~e~~~~~~~~~~ 272 (332)
......++.-|- .|+..+. .+....+++||++++||++- +.. |. +-+..++..+
T Consensus 155 ~~~~~~~~~~~~~~h~~Ghg-iGl~~~e~p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~--~~-------~~~~~~~~~g 224 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHY-LGLDVHDVGGYLRYLRRARPLEPGMVITIEPGIYFIPD--LL-------DVPEYFRGGG 224 (243)
T ss_pred HhhhhhhhhhhhcCCCCccc-cCcccccCccccccCCCCCCCCCCCEEEECCEEEeCCc--cc-------ccccccceeE
Confidence 011122222121 1322111 01112378999999999872 111 10 1134567789
Q ss_pred EEEcCcccchhhhhhhhh
Q psy16136 273 VYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 273 v~~~~~i~it~~~~~~l~ 290 (332)
+++||++.||+++.+.||
T Consensus 225 ~~ied~v~Vt~~G~e~Lt 242 (243)
T cd01087 225 IRIEDDVLVTEDGPENLT 242 (243)
T ss_pred EEeeeEEEEcCCcceeCc
Confidence 999999999999999887
No 21
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.8e-33 Score=253.56 Aligned_cols=219 Identities=21% Similarity=0.249 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCC-----CCCcceeeeCCCCCcccCCCCCCCCCcc
Q psy16136 50 LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRH-----VAYTCICASGGNGAVLHYGHASAPNDKR 124 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~-----~~~~~iv~sG~n~~~~h~~~~~~p~~r~ 124 (332)
|+.||+|+++++++++++++.++||+||.|+++.+.+.+.+. |... ..|+..+.+|.|+..+|+ .|++++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~h~----~~~~~~ 75 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEH-GAYPAPLGYYGFPKSICTSVNEVVCHG----IPDDRV 75 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCcccccCCCCCcceecCCCCceeCC----CCCCcc
Confidence 689999999999999999999999999999999999998865 4422 235566778899999995 468999
Q ss_pred cCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc-----
Q psy16136 125 VNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL----- 199 (332)
Q Consensus 125 l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g----- 199 (332)
|++||+|++|+|+.++||++|++|||++ |+++++|+++|+.+.++++++++++|||++++||++++++++++.|
T Consensus 76 l~~Gd~v~id~g~~~~GY~ad~~RT~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~ 154 (238)
T cd01086 76 LKDGDIVNIDVGVELDGYHGDSARTFIV-GEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVR 154 (238)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceec
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999999999987
Q ss_pred --ccCCcccCccccccccceeEeeecc---ccCCceeeEeccCCcEEEEecCCCcc---cccccCCCCChhHHHHHcCCc
Q psy16136 200 --LDIGLLRGTIDELMEESYFHWAFGV---YEPDFYGVIEMTTGRSILFAPRLSED---YVVWMGQLPTLDEYKEKYQVD 271 (332)
Q Consensus 200 --~ghGi~~~~~~~~~~~~~f~~~pGi---~~pg~~g~~~~~~g~~ilf~P~~~~~---~~iW~G~~p~~e~~~~~~~~~ 271 (332)
+|||+... +|-.|-+ ..++... .+++||+++++|.+... -..|... ..+..+.+..
T Consensus 155 ~~~GHgiG~~----------~~e~p~~~~~~~~~~~~--~le~Gmv~~iep~i~~~~~~~~~~~~~----~~~~~~~g~~ 218 (238)
T cd01086 155 EFGGHGIGRK----------FHEEPQIPNYGRPGTGP--KLKPGMVFTIEPMINLGTYEVVTLPDG----WTVVTKDGSL 218 (238)
T ss_pred CccccCCCCc----------cccCCCcCCccCCCCCC--EecCCCEEEEeeEEECCCCceEECCCC----CEEEcCCCCE
Confidence 45665321 1111111 1133222 36899999999987321 0112111 0122235677
Q ss_pred eEEEcCcccchhhhhhhhh
Q psy16136 272 EVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 272 ~v~~~~~i~it~~~~~~l~ 290 (332)
++++||+++||+++.+.||
T Consensus 219 g~~~edtv~Vte~G~e~Lt 237 (238)
T cd01086 219 SAQFEHTVLITEDGPEILT 237 (238)
T ss_pred EEeeeeEEEEcCCcceeCC
Confidence 9999999999999999887
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=2.8e-32 Score=241.61 Aligned_cols=144 Identities=31% Similarity=0.545 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCC
Q psy16136 50 LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGD 129 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd 129 (332)
|++||+|+++++.++.++.+.++||+||.||++.+++.+.+. |....+|+++++||.|+..+|+. |+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~~~~~~~~~v~~g~~~~~~h~~----~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKL-GAEGPSFDTIVASGPNSALPHGV----PSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECccccccCCC----CCCcCcCCCC
Confidence 579999999999999999999999999999999999998865 66667899999999999999964 5899999999
Q ss_pred eEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc
Q psy16136 130 MLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL 199 (332)
Q Consensus 130 ~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g 199 (332)
++.+|+|+.|+||++|++||+++ |+++++++++|+++.++++.+++.+|||++++||+++++++++++|
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g 144 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAV-GEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAG 144 (208)
T ss_pred EEEEEeeeeECCEeccceeEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999 8999999999999999999999999999999999999999999986
No 23
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-31 Score=241.04 Aligned_cols=228 Identities=24% Similarity=0.299 Sum_probs=183.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhC------CCCCCCCcceeeeCCCCCcccCCCC
Q psy16136 44 IKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVG------GSRHVAYTCICASGGNGAVLHYGHA 117 (332)
Q Consensus 44 iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~------g~~~~~~~~iv~sG~n~~~~h~~~~ 117 (332)
+||++||+.||+|++|+.++++.+.+.++||+|..||+...++.+.+++ |..+++| ++|.| .|...+|+.+
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~-~~ciS-vNe~v~HgiP- 81 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPF-PTCIS-VNEVVAHGIP- 81 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCc-ceEee-hhheeeecCC-
Confidence 8999999999999999999999999999999999999999999998642 2333333 57777 9999999654
Q ss_pred CCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHH
Q psy16136 118 SAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFT-EKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVL 196 (332)
Q Consensus 118 ~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~-~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~ 196 (332)
. ++++|++||+|.||+|+.++||++|.++|+.+ |+.+ +..+++.+++.++..++++.+|||++.+||.++++++++
T Consensus 82 ~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~ 158 (255)
T COG0024 82 G--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAE 158 (255)
T ss_pred C--CCcccCCCCEEEEEEEEEECCeeeeEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 1 46789999999999999999999999999999 8655 577779999999999999999999999999999999999
Q ss_pred hhc-------ccCCcccCccccccccceeEeeeccccCCcee-eEeccCCcEEEEecCCCccc---ccccCCCCChhHHH
Q psy16136 197 SKL-------LDIGLLRGTIDELMEESYFHWAFGVYEPDFYG-VIEMTTGRSILFAPRLSEDY---VVWMGQLPTLDEYK 265 (332)
Q Consensus 197 ~~g-------~ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g-~~~~~~g~~ilf~P~~~~~~---~iW~G~~p~~e~~~ 265 (332)
++| .|||+.. .||=.|-+.+.+..+ ...+++||++++||.++... ..|. .+.|.
T Consensus 159 ~~G~~vVr~~~GHgig~----------~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~-----~d~Wt 223 (255)
T COG0024 159 SRGFSVVRNLTGHGIGR----------ELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGP-----SDRWT 223 (255)
T ss_pred HcCCEEeecccCCccCc----------ccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecC-----CCCeE
Confidence 887 6899853 234334333311111 14689999999999987542 1221 12222
Q ss_pred --HHcCCceEEEcCcccchhhhhhhhhhc
Q psy16136 266 --EKYQVDEVYFSDEVMYSRAYLHDITAK 292 (332)
Q Consensus 266 --~~~~~~~v~~~~~i~it~~~~~~l~~~ 292 (332)
..-+.-.+|||+++.||+++.+.||+.
T Consensus 224 ~~t~d~~~~aq~EHTv~Vt~~g~eilT~~ 252 (255)
T COG0024 224 LVTKDGSLSAQFEHTVIVTEDGCEILTLR 252 (255)
T ss_pred EEeCCCCEEeEEEEEEEEeCCCcEEeeCC
Confidence 223567799999999999999999954
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.98 E-value=5.3e-31 Score=233.52 Aligned_cols=144 Identities=34% Similarity=0.540 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCe
Q psy16136 51 DVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDM 130 (332)
Q Consensus 51 ~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~ 130 (332)
|+||+|++++++++.++++.++||+||.||++.+.+.+..+.|....+|++++.||.|+..+|+. |++++|++||+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----~~~~~l~~gd~ 76 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYT----PTDRRLQEGDI 76 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTB----CCSSBESTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceeccee----ccceeeecCCc
Confidence 58999999999999999999999999999999999985445566677888999999999999974 58999999999
Q ss_pred EEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc
Q psy16136 131 LVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL 200 (332)
Q Consensus 131 v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~ 200 (332)
|.+|+|+.|+||++|++||+++ | ++++|+++|+.++++++.+++.+|||++++||++++++.+.+.|+
T Consensus 77 v~id~~~~~~gy~~d~~Rt~~~-G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~ 144 (207)
T PF00557_consen 77 VIIDFGPRYDGYHADIARTFVV-G-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGL 144 (207)
T ss_dssp EEEEEEEEETTEEEEEEEEEES-S-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTE
T ss_pred ceeeccceeeeeEeeeeeEEEE-e-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcc
Confidence 9999999999999999999998 8 999999999999999999999999999999999999999999875
No 25
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.97 E-value=3.3e-31 Score=240.50 Aligned_cols=215 Identities=16% Similarity=0.195 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhCC--ccHHHHHHHHHHHHHHhCCC----C----CCCCcceeeeCCCC-Cccc
Q psy16136 50 LDVMRYASRISSEAHRSVMR-----KVSAG--MYEYQAEAIFKHYILYVGGS----R----HVAYTCICASGGNG-AVLH 113 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~-----~i~pG--~tE~ei~~~~~~~~~~~~g~----~----~~~~~~iv~sG~n~-~~~h 113 (332)
++++|+|+++++.+|...+. .+.+| +|+.+|+..++..+.+.+.. . .++|+++++||.|+ ..+|
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~h 80 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCeEeECcCcccCCC
Confidence 46899999999999987665 78999 99999999999999865322 1 46899999999999 7888
Q ss_pred CCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHH
Q psy16136 114 YGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANK 193 (332)
Q Consensus 114 ~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~ 193 (332)
+ .++++.+..|++|++|+|++|+|||+|++|||++ | ++++|+++|++++++++++++.+|||++++||++++++
T Consensus 81 ~----~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~ 154 (243)
T cd01091 81 S----SSSDKLLYHFGVIICSLGARYKSYCSNIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLD 154 (243)
T ss_pred C----CCCccccCCCCEEEEEeCcccCCEeecceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 5 4589999999999999999999999999999999 5 79999999999999999999999999999999999999
Q ss_pred HHHhhc----------ccCCcccCccccccccceeEeeeccccCCceeeEeccCCcEEEEecCCCcccccccCCCCChhH
Q psy16136 194 VVLSKL----------LDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDE 263 (332)
Q Consensus 194 ~l~~~g----------~ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~ 263 (332)
++++.+ .|||+.-. ||=.|.+-.++... .+++||+++++|++ |.+ ++...
T Consensus 155 ~i~~~~~~~~~~~~~~~GHgiGle----------~hE~~~~l~~~~~~--~L~~GMvf~vepGi---~~~-----~~~~~ 214 (243)
T cd01091 155 YIKKKKPELEPNFTKNLGFGIGLE----------FRESSLIINAKNDR--KLKKGMVFNLSIGF---SNL-----QNPEP 214 (243)
T ss_pred HHHHhChhHHHhCcCCcccccCcc----------cccCccccCCCCCC--CcCCCCEEEEeCCc---ccc-----cCccc
Confidence 998864 46665311 11111111122222 36899999999998 311 11112
Q ss_pred HHHHcCCceEEEcCcccchhhhh-hhhh
Q psy16136 264 YKEKYQVDEVYFSDEVMYSRAYL-HDIT 290 (332)
Q Consensus 264 ~~~~~~~~~v~~~~~i~it~~~~-~~l~ 290 (332)
..++++.-+++++|++.||+++. +.||
T Consensus 215 ~~~~~~~~gv~ieDtV~Vt~~G~~~~LT 242 (243)
T cd01091 215 KDKESKTYALLLSDTILVTEDEPAIVLT 242 (243)
T ss_pred cCccCCeeEEEEEEEEEEcCCCCceecC
Confidence 22456667899999999999998 6665
No 26
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.97 E-value=7.2e-31 Score=236.52 Aligned_cols=205 Identities=19% Similarity=0.167 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHh---------CCCCCCCCcceeeeCCCCCcccCCCCCCC
Q psy16136 50 LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYV---------GGSRHVAYTCICASGGNGAVLHYGHASAP 120 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~---------~g~~~~~~~~iv~sG~n~~~~h~~~~~~p 120 (332)
++.||+|++|++++++++.+.++||+||.|++...+..+.+. .|..+.+|+++++ .|+..+|+.+...+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCC
Confidence 368999999999999999999999999999987766666541 3555677777665 48888997531114
Q ss_pred CCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCH-----HHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHH
Q psy16136 121 NDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTE-----KQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVV 195 (332)
Q Consensus 121 ~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~-----~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l 195 (332)
++++|++||+|++|+|+.|+||++|++|||++ |++++ +++++|+++.++++++++++|||++++||++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 78999999999999999999999999999999 88874 8999999999999999999999999999999999999
Q ss_pred Hhhcc-------cCCcccCccccccccceeEeeeccccCCcee-eEeccCCcEEEEecCCCcccccccCCCCChhHHHHH
Q psy16136 196 LSKLL-------DIGLLRGTIDELMEESYFHWAFGVYEPDFYG-VIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEK 267 (332)
Q Consensus 196 ~~~g~-------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g-~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~ 267 (332)
++.|+ +|++.. .+++. |++.. ...++.||+|.++|.+ + .
T Consensus 158 ~~~G~~~~~~~~~h~~g~----------~~~~~-----~~~~~~~~~l~~gmvf~~ep~~---~---------------~ 204 (228)
T cd01089 158 VDYGCTPVEGVLSHQLKR----------VVSSG-----EGKAKLVECVKHGLLFPYPVLY---E---------------K 204 (228)
T ss_pred HHcCCEEecCccccCcCc----------eEecC-----CCCccchhhccCCcccccceeE---c---------------c
Confidence 99972 455532 11111 12211 1236799999999887 1 2
Q ss_pred cCCceEEEcCcccchhhhhhhhh
Q psy16136 268 YQVDEVYFSDEVMYSRAYLHDIT 290 (332)
Q Consensus 268 ~~~~~v~~~~~i~it~~~~~~l~ 290 (332)
-+...+++++++.||++|.+.||
T Consensus 205 ~g~~~~~~~~Tv~vt~~G~e~lt 227 (228)
T cd01089 205 EGEVVAQFKLTVLLTPNGVTVLT 227 (228)
T ss_pred CCCeEEEEEEEEEEcCCCCeeCC
Confidence 34566999999999999998886
No 27
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=99.97 E-value=4.5e-30 Score=230.48 Aligned_cols=203 Identities=21% Similarity=0.257 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCC--ccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCC---Cccc
Q psy16136 51 DVMRYASRISSEAHRSVMRKVSAG--MYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPN---DKRV 125 (332)
Q Consensus 51 ~~mr~A~~ia~~~~~~~~~~i~pG--~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~---~r~l 125 (332)
+.||.+..+ .++++.+.+.++|| +||.||++.+++.+...++....+|+++|++|+|++.+|+. |+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~----p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYS----PTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCC----cCcccCccc
Confidence 345655555 58888899999999 99999999999877654444456789999999999999965 46 8999
Q ss_pred CCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCchhhhhHHHHHHHHhhc-----
Q psy16136 126 NDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAK-PGVSWVDMHHLANKVVLSKL----- 199 (332)
Q Consensus 126 ~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~r-pG~~~~di~~a~~~~l~~~g----- 199 (332)
++||+|++|+|+.++||++|++|||++ |+++++|+++|+.+++++.++++.++ ||+++++|++++++.+.+.|
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHL-GEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999 99999999999999999999999884 89999999999999998876
Q ss_pred -ccCCcccCccccccccceeEeeecc-ccCCceeeEeccCCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcC
Q psy16136 200 -LDIGLLRGTIDELMEESYFHWAFGV-YEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSD 277 (332)
Q Consensus 200 -~ghGi~~~~~~~~~~~~~f~~~pGi-~~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~ 277 (332)
+||||...- .+|=.|-+ +.++... .+++||++++||.+ | +.| .+++. +||
T Consensus 159 ~~GHgIG~~l--------~~hE~P~i~~~~~~~~--~L~~GmvftiEP~i---y--~~g----------~~gvr---ied 210 (224)
T cd01085 159 GTGHGVGSFL--------NVHEGPQSISPAPNNV--PLKAGMILSNEPGY---Y--KEG----------KYGIR---IEN 210 (224)
T ss_pred CCCCCCCCCC--------cCCCCCCcCCcCCCCC--CcCCCCEEEECCEe---E--eCC----------CeEEE---eeE
Confidence 578774210 00101111 0122222 36788888888888 3 111 23332 678
Q ss_pred cccchhhhhh
Q psy16136 278 EVMYSRAYLH 287 (332)
Q Consensus 278 ~i~it~~~~~ 287 (332)
++.||+++..
T Consensus 211 ~v~Vt~~G~~ 220 (224)
T cd01085 211 LVLVVEAETT 220 (224)
T ss_pred EEEEeeCCcC
Confidence 8888888754
No 28
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.97 E-value=1.6e-29 Score=222.31 Aligned_cols=198 Identities=25% Similarity=0.381 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCC
Q psy16136 50 LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGD 129 (332)
Q Consensus 50 I~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd 129 (332)
|+.||+|+++++.++..+++.++||+||.|+.+.+.+.+.+. |. ..++++++++|+|+..+|+. |+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~-~~~~~~~v~~g~~~~~~h~~----~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAA-GG-YPAGPTIVGSGARTALPHYR----PDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CC-CCCCCcEEEECccccCcCCC----CCCCCcCCCC
Confidence 578999999999999999999999999999999999998876 44 45677899999999999964 4789999999
Q ss_pred eEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc--------c
Q psy16136 130 MLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL--------D 201 (332)
Q Consensus 130 ~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~--------g 201 (332)
++++|+|+.++||++|++||+++ |+++++++++|+.+.++++.+++.+|||+++.|+++++++.++++|. |
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~G 153 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVI-GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTG 153 (207)
T ss_pred EEEEEeceeECCCccceeceeEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCc
Confidence 99999999999999999999999 89999999999999999999999999999999999999999999863 4
Q ss_pred CCcccCccccccccceeEeeeccccCCceeeEeccCCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccc
Q psy16136 202 IGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMY 281 (332)
Q Consensus 202 hGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~i 281 (332)
||+... +| +.....++.. ..+++||++.++|.+... . ..++++||++.|
T Consensus 154 h~iG~~----------~~-e~~~~~~~~~--~~l~~gmv~~iep~~~~~---------~---------~~g~~~ed~v~v 202 (207)
T cd01066 154 HGIGLE----------IH-EPPVLKAGDD--TVLEPGMVFAVEPGLYLP---------G---------GGGVRIEDTVLV 202 (207)
T ss_pred cccCcc----------cC-CCCCcCCCCC--CCcCCCCEEEECCEEEEC---------C---------CcEEEeeeEEEE
Confidence 554211 01 1111112221 236799999999987211 0 557999999999
Q ss_pred hhhh
Q psy16136 282 SRAY 285 (332)
Q Consensus 282 t~~~ 285 (332)
|+++
T Consensus 203 t~~g 206 (207)
T cd01066 203 TEDG 206 (207)
T ss_pred eCCC
Confidence 8875
No 29
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.95 E-value=4.1e-27 Score=226.47 Aligned_cols=158 Identities=21% Similarity=0.258 Sum_probs=139.0
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhC---------CCCCCCCcceeeeCCCCCcc
Q psy16136 42 RVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVG---------GSRHVAYTCICASGGNGAVL 112 (332)
Q Consensus 42 R~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~---------g~~~~~~~~iv~sG~n~~~~ 112 (332)
-.+|+|+||+.||+|++|++++++.+.+.++||+|+.||+...+..+.++. +..+++|+++++ .|+..+
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS--vN~~v~ 88 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS--VNNCVG 88 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--cCCeee
Confidence 368999999999999999999999999999999999999998877776532 234567876654 789999
Q ss_pred cCCCCCCCC--CcccCCCCeEEEEecceeCCeeeceeeEEEeCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCchh
Q psy16136 113 HYGHASAPN--DKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGK-----FTEKQAYIYNAVLSANRAVMEAAKPGVSWV 185 (332)
Q Consensus 113 h~~~~~~p~--~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~-----~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~ 185 (332)
||.+ .++ +++|++||+|.||+|+.++||++|++||+++ |+ ++++++++++++++|++++++.+|||++++
T Consensus 89 H~~P--~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~ 165 (389)
T TIGR00495 89 HFSP--LKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNT 165 (389)
T ss_pred CCCC--CCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence 9763 223 5889999999999999999999999999999 64 578999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhc-------ccCCc
Q psy16136 186 DMHHLANKVVLSKL-------LDIGL 204 (332)
Q Consensus 186 di~~a~~~~l~~~g-------~ghGi 204 (332)
||+++++++++++| .|||+
T Consensus 166 dI~~ai~~v~~~~G~~~v~~~~gH~i 191 (389)
T TIGR00495 166 QVTEAINKVAHSYGCTPVEGMLSHQL 191 (389)
T ss_pred HHHHHHHHHHHHcCCeecCCceeecc
Confidence 99999999999997 56887
No 30
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.95 E-value=9.4e-27 Score=225.82 Aligned_cols=153 Identities=16% Similarity=0.141 Sum_probs=133.7
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHh---CCC-CCCCCcceeeeCCCCCcccCCC
Q psy16136 41 SRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYV---GGS-RHVAYTCICASGGNGAVLHYGH 116 (332)
Q Consensus 41 lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~---~g~-~~~~~~~iv~sG~n~~~~h~~~ 116 (332)
-+..+|++||+.||+|++|+.++++.+.+.++||+||.||+..++..+.+. .|. .+.+|++.+ +.|.+.+||.+
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~aaH~tP 226 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCAAHYTP 226 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCccccCCCC
Confidence 344589999999999999999999999999999999999999888866532 243 357887755 47899999764
Q ss_pred CCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHH
Q psy16136 117 ASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVL 196 (332)
Q Consensus 117 ~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~ 196 (332)
...++++|++||+|.||+|+.++||++|++||+.+ | ++++++++++.+|+++++++++||++++||.++++++++
T Consensus 227 -~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevie 301 (470)
T PTZ00053 227 -NTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIE 301 (470)
T ss_pred -CCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 11137889999999999999999999999999998 5 689999999999999999999999999999999999999
Q ss_pred hhcc
Q psy16136 197 SKLL 200 (332)
Q Consensus 197 ~~g~ 200 (332)
++|+
T Consensus 302 s~G~ 305 (470)
T PTZ00053 302 SYEV 305 (470)
T ss_pred HcCC
Confidence 9873
No 31
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.95 E-value=1.9e-26 Score=215.02 Aligned_cols=149 Identities=18% Similarity=0.273 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccC
Q psy16136 47 ELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVN 126 (332)
Q Consensus 47 ~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~ 126 (332)
-+||+.||+|++|++++++.+.+.++||+||.||++.++..+.+. |.. .+|+++++ .|+..+||.+ ..+++++|+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~-g~~-~aFp~~vs--~n~~~~H~~p-~~~d~~~l~ 76 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIREL-GAE-PAFPCNIS--INECAAHFTP-KAGDKTVFK 76 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCC-CCCCccee--cCCEeeCCCC-CCCcCccCC
Confidence 378999999999999999999999999999999999999999875 544 57887765 5777899875 223467899
Q ss_pred CCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc-------
Q psy16136 127 DGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL------- 199 (332)
Q Consensus 127 ~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g------- 199 (332)
+||+|.+|+|+.++||++|++||+++ |+ .++++|+++.+|++++++.+|||++++||++++++++++.|
T Consensus 77 ~GDvV~iD~G~~~dGY~aD~arT~~v-G~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~~~ 152 (295)
T TIGR00501 77 DGDVVKLDLGAHVDGYIADTAITVDL-GD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPISNL 152 (295)
T ss_pred CCCEEEEEEeEEECCEEEEEEEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeecCC
Confidence 99999999999999999999999999 64 47899999999999999999999999999999999999986
Q ss_pred ccCCc
Q psy16136 200 LDIGL 204 (332)
Q Consensus 200 ~ghGi 204 (332)
+|||+
T Consensus 153 ~GHgi 157 (295)
T TIGR00501 153 TGHSM 157 (295)
T ss_pred CCcce
Confidence 56776
No 32
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.94 E-value=7.6e-26 Score=210.73 Aligned_cols=172 Identities=20% Similarity=0.215 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCe
Q psy16136 51 DVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDM 130 (332)
Q Consensus 51 ~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~ 130 (332)
+.||+|++|++++++++++.++||+||.|+++.+++.+.+. |. ..+|++.+ +.|...+||.+ ...++++|++||+
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~-G~-~~afp~~i--s~n~~~~H~~p-~~~d~~~l~~GDv 76 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIREL-GA-GPAFPVNL--SINECAAHYTP-NAGDDTVLKEGDV 76 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc-CC-CCCCCcee--ccCCEeeCCCC-CCCCCcccCCCCE
Confidence 68999999999999999999999999999999999998865 43 46776543 47888899865 2224589999999
Q ss_pred EEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc-------ccCC
Q psy16136 131 LVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL-------LDIG 203 (332)
Q Consensus 131 v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g-------~ghG 203 (332)
|.+|+|+.++||++|++||+++ |+ ++++++++++++++++++.+|||++++||+++++++++++| +|||
T Consensus 77 V~iD~G~~~dGY~sD~arT~~v-g~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~GHg 152 (291)
T cd01088 77 VKLDFGAHVDGYIADSAFTVDF-DP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLTGHS 152 (291)
T ss_pred EEEEEEEEECCEEEEEEEEEec-Ch---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCCccC
Confidence 9999999999999999999999 64 88899999999999999999999999999999999999997 4787
Q ss_pred ccc-------------Cccccccccce-eEeeeccccCCceee
Q psy16136 204 LLR-------------GTIDELMEESY-FHWAFGVYEPDFYGV 232 (332)
Q Consensus 204 i~~-------------~~~~~~~~~~~-f~~~pGi~~pg~~g~ 232 (332)
|.. ...+..++++| |+++|.+ ..|.+.+
T Consensus 153 ig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~-s~G~G~v 194 (291)
T cd01088 153 IERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFA-TTGKGYV 194 (291)
T ss_pred ccCccccCCCccCccCCCCCCEeCCCCEEEEceeE-ECCCCee
Confidence 731 11233445554 8888854 3454443
No 33
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.94 E-value=4.8e-26 Score=212.08 Aligned_cols=147 Identities=22% Similarity=0.354 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCC
Q psy16136 49 ELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDG 128 (332)
Q Consensus 49 EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~G 128 (332)
+|+.||+|++|++++++.+.+.++||+||.||++.++..+.+. |. ..+|++++++| ...+||.+ ...+++.|++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~-g~-~~afp~~vs~n--~~~~H~~p-~~~d~~~l~~G 75 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIREL-GA-KPAFPCNISIN--EVAAHYTP-SPGDERVFPEG 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CC-ccCCCCEEeeC--CCccCCCC-CCCCCcccCCC
Confidence 5899999999999999999999999999999999999999875 43 36788777664 45689864 22236889999
Q ss_pred CeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc-------cc
Q psy16136 129 DMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL-------LD 201 (332)
Q Consensus 129 d~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g-------~g 201 (332)
|+|.+|+|+.++||++|++||+++ | ++++++++++.++++++++.+|||++++||++++++++++.| +|
T Consensus 76 DvV~iD~G~~~dGY~aD~arT~~v-G---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~~G 151 (291)
T PRK08671 76 DVVKLDLGAHVDGYIADTAVTVDL-G---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNLTG 151 (291)
T ss_pred CEEEEEEeEEECCEEEEEEEEEEe-C---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCCcc
Confidence 999999999999999999999999 6 478999999999999999999999999999999999999986 56
Q ss_pred CCc
Q psy16136 202 IGL 204 (332)
Q Consensus 202 hGi 204 (332)
|||
T Consensus 152 Hgi 154 (291)
T PRK08671 152 HGL 154 (291)
T ss_pred cCc
Confidence 877
No 34
>KOG2413|consensus
Probab=99.83 E-value=1.4e-19 Score=175.96 Aligned_cols=196 Identities=22% Similarity=0.296 Sum_probs=166.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh----hCC--ccHHHHHHHHHHHHHHhCCCCCCCCcceeee-CC
Q psy16136 35 HGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKV----SAG--MYEYQAEAIFKHYILYVGGSRHVAYTCICAS-GG 107 (332)
Q Consensus 35 ~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i----~pG--~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~s-G~ 107 (332)
...+..++++|.+.|++.||.|----..|+...+.++ .-| +||.+++..++..-.++....+++|.+|.+| |+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G~ 377 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVGP 377 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccCCC
Confidence 4678899999999999999998776677777777665 356 8999999999998887778888999999977 99
Q ss_pred CCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCchhh
Q psy16136 108 NGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKP-GVSWVD 186 (332)
Q Consensus 108 n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~d 186 (332)
|++++||.+ ..-+++.+.+..+.++|.|++|.--.+|+|||+.+ |+||+++++.|..+++.+-+..++..| |..+..
T Consensus 378 NgAviHYsP-~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 378 NGAVIHYSP-PAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CceeeecCC-CccccceecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 999999976 33357899999999999999998889999999999 999999999999999999999999998 889999
Q ss_pred hhHHHHHHHHhhc------ccCCccc---------------Cccccccccce-eEeeeccccCCceee
Q psy16136 187 MHHLANKVVLSKL------LDIGLLR---------------GTIDELMEESY-FHWAFGVYEPDFYGV 232 (332)
Q Consensus 187 i~~a~~~~l~~~g------~ghGi~~---------------~~~~~~~~~~~-f~~~pGi~~pg~~g~ 232 (332)
++..+|..+.+.| .|||+.+ -++...++.+| +..+||.|..|.+|+
T Consensus 456 lD~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGI 523 (606)
T KOG2413|consen 456 LDALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGI 523 (606)
T ss_pred hHHHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceE
Confidence 9999999999975 6787611 12344566666 678889888777665
No 35
>KOG1189|consensus
Probab=99.77 E-value=9.8e-18 Score=165.53 Aligned_cols=187 Identities=17% Similarity=0.267 Sum_probs=149.5
Q ss_pred ccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH-----HHhhCC--ccHHHHHHHHHHHHHHhC---CC----CC
Q psy16136 31 LIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVM-----RKVSAG--MYEYQAEAIFKHYILYVG---GS----RH 96 (332)
Q Consensus 31 ~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~-----~~i~pG--~tE~ei~~~~~~~~~~~~---g~----~~ 96 (332)
..|++-.+..+-++|++.||+.+|+|++++...|...+ +.+..| +|..-+...++..+.... |. -.
T Consensus 124 ~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d 203 (960)
T KOG1189|consen 124 KVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLD 203 (960)
T ss_pred eeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccc
Confidence 35788889999999999999999999999999998554 334444 677777777777665321 11 13
Q ss_pred CCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy16136 97 VAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVME 176 (332)
Q Consensus 97 ~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~ 176 (332)
+.|+||++||.+..+-.. ..++++.| + +++..+|++|++|||+++||+.+ .|+.+|++.|+.++.+|++++.
T Consensus 204 ~cY~PIiqSGg~ydlk~s---a~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li--dpssemq~nY~fLl~aqe~il~ 275 (960)
T KOG1189|consen 204 MCYPPIIQSGGKYDLKPS---AVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI--DPSSEMQENYEFLLAAQEEILK 275 (960)
T ss_pred cccChhhhcCCccccccc---cccccccc--c-eEEeeccchhhhhhccccceeee--cchHHHHHHHHHHHHHHHHHHH
Confidence 678999999988754321 34577788 4 89999999999999999999999 8999999999999999999999
Q ss_pred HcCCCCchhhhhHHHHHHHHhh------------cccCCc--------ccCccccccccce-eEeeeccc
Q psy16136 177 AAKPGVSWVDMHHLANKVVLSK------------LLDIGL--------LRGTIDELMEESY-FHWAFGVY 225 (332)
Q Consensus 177 ~~rpG~~~~di~~a~~~~l~~~------------g~ghGi--------~~~~~~~~~~~~~-f~~~pGi~ 225 (332)
.||||++.++||.++.+++++. |.|.|| +..-++.+++.+| |.+..|+.
T Consensus 276 ~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~inaKnd~~lk~gmvFni~lGf~ 345 (960)
T KOG1189|consen 276 LLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINAKNDRVLKKGMVFNISLGFS 345 (960)
T ss_pred hhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccccchhhhccCcEEEEeeccc
Confidence 9999999999999999999987 345565 3344556667776 87777764
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.52 E-value=1.2e-13 Score=134.48 Aligned_cols=163 Identities=19% Similarity=0.174 Sum_probs=123.9
Q ss_pred ccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH---HHhhCC---ccHHHHHHHHHHHHHHh---------CCC-
Q psy16136 31 LIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVM---RKVSAG---MYEYQAEAIFKHYILYV---------GGS- 94 (332)
Q Consensus 31 ~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~---~~i~pG---~tE~ei~~~~~~~~~~~---------~g~- 94 (332)
..|++.-+..+-.+|+.+||+.+|.+++.++..|.... ..+--| +|..-+...++..+-.. .|.
T Consensus 157 ~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~ 236 (1001)
T COG5406 157 ASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDI 236 (1001)
T ss_pred hhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccccc
Confidence 46888899999999999999999999999998888333 222222 33333433333322111 011
Q ss_pred ----CCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHH
Q psy16136 95 ----RHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSA 170 (332)
Q Consensus 95 ----~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a 170 (332)
-.+.|.||++||..--+. ++....++.+. ||+|+..+|.+|+|||+.++||+.+ +|+.+|++.|+-++.+
T Consensus 237 ~~d~lew~ytpiiqsg~~~Dl~---psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~--dp~~e~~~Ny~fl~~l 310 (1001)
T COG5406 237 DLDQLEWCYTPIIQSGGSIDLT---PSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT--DPDSEQQKNYEFLYML 310 (1001)
T ss_pred chhhhhhhcchhhccCceeecc---cccccCchhhc-CceEEEEeeeeeccccccccceEEe--CCchHhhhhHHHHHHH
Confidence 024678999998754321 10233455554 7899999999999999999999987 8999999999999999
Q ss_pred HHHHHHHcCCCCchhhhhHHHHHHHHhhc
Q psy16136 171 NRAVMEAAKPGVSWVDMHHLANKVVLSKL 199 (332)
Q Consensus 171 ~~~~i~~~rpG~~~~di~~a~~~~l~~~g 199 (332)
|+..+..||||.+.++||..+.+++.+.+
T Consensus 311 Qk~i~~~~rpG~~~g~iY~~~~~yi~~~~ 339 (1001)
T COG5406 311 QKYILGLVRPGTDSGIIYSEAEKYISSNG 339 (1001)
T ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHhcC
Confidence 99999999999999999999999999986
No 37
>KOG2775|consensus
Probab=99.50 E-value=1.2e-12 Score=117.95 Aligned_cols=253 Identities=16% Similarity=0.209 Sum_probs=174.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHH---hCCC-CCCCCcceeeeCCCCCcccCCCCCCC
Q psy16136 45 KTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILY---VGGS-RHVAYTCICASGGNGAVLHYGHASAP 120 (332)
Q Consensus 45 Ks~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~---~~g~-~~~~~~~iv~sG~n~~~~h~~~~~~p 120 (332)
-..+...-+|+|+++..++-..+.+.++||||-.||+..++...++ ++|. .+.+||+-|+ -|.+..||+++ .-
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpN-aG 156 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPN-AG 156 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCC-CC
Confidence 3455677899999999999999999999999999999999887653 3332 3467876553 57888999862 22
Q ss_pred CCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhh--
Q psy16136 121 NDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSK-- 198 (332)
Q Consensus 121 ~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~-- 198 (332)
...+|+.+|++.||+|...+|-..|.+.|+.+ .+....+..++++|...+|+...-.++..||.++++++++.+
T Consensus 157 d~tVLqydDV~KiDfGthi~GrIiDsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEv 232 (397)
T KOG2775|consen 157 DKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF----NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEV 232 (397)
T ss_pred CceeeeecceEEEeccccccCeEeeeeeEEee----CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEE
Confidence 34678999999999999999999999999988 345566889999999999999999999999999999999987
Q ss_pred --------------cccCCc-------------ccCccccccccc-eeEeeeccccCCceeeEeccCCcEEEEecCCCcc
Q psy16136 199 --------------LLDIGL-------------LRGTIDELMEES-YFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSED 250 (332)
Q Consensus 199 --------------g~ghGi-------------~~~~~~~~~~~~-~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~ 250 (332)
..||.| +++..++-++++ .|.+++ +--.|- |++. +...+-++.-+.+.
T Consensus 233 Ei~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIET-FgSTGk-G~v~-ddmecSHymkn~~~- 308 (397)
T KOG2775|consen 233 EINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIET-FGSTGK-GYVH-DDMECSHYMKNFEL- 308 (397)
T ss_pred EeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEe-eccCCc-ceec-CCcccchhhhhccc-
Confidence 257776 233333334444 455652 111222 2211 12222333333322
Q ss_pred cccccCCCC-ChhHHHHHcCCceEEEcCcccchhhhhhhhhhcccccce--eeeeCCCCCCCCCceeE
Q psy16136 251 YVVWMGQLP-TLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKS--LTHPLGLFAPTPKLRIV 315 (332)
Q Consensus 251 ~~iW~G~~p-~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~ 315 (332)
|.+| .+...+..+....=. ..++.+++..+..|..-.| +.+ .++-.|.-.|||.|--|
T Consensus 309 -----~~vplrl~~~K~ll~~I~kn-fgTLaFcrR~lDrlGetKy-LmAlk~Lc~~Giv~pyPPLcDi 369 (397)
T KOG2775|consen 309 -----GHVPLRLQRSKGLLNTIDKN-FGTLAFCRRWLDRLGETKY-LMALKNLCDMGIVQPYPPLCDI 369 (397)
T ss_pred -----cccccccHHHHHHHHHHhhc-cccccccHHHHHHhhhHHH-HHHHHhhhhcccccCCCccccc
Confidence 2233 445555455433222 3788899999888772221 112 55677888899987543
No 38
>KOG2776|consensus
Probab=99.37 E-value=1.4e-11 Score=113.68 Aligned_cols=153 Identities=21% Similarity=0.255 Sum_probs=128.3
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCC---------CCCCCCcceeeeCCCCCccc
Q psy16136 43 VIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGG---------SRHVAYTCICASGGNGAVLH 113 (332)
Q Consensus 43 ~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g---------~~~~~~~~iv~sG~n~~~~h 113 (332)
.+-++.-+..+|-|++|+.+++..+.+.+.||.+-.||+..-...+..+.| ..+.+||+.+ | .|.+.+|
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~I-s-vnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSI-S-VNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhcccccccee-c-ccceeec
Confidence 355677788999999999999999999999999999998777666543221 2346787544 3 7888999
Q ss_pred CCCCCCCC-CcccCCCCeEEEEecceeCCeeeceeeEEEeCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCchhhh
Q psy16136 114 YGHASAPN-DKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGK-----FTEKQAYIYNAVLSANRAVMEAAKPGVSWVDM 187 (332)
Q Consensus 114 ~~~~~~p~-~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~-----~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di 187 (332)
|.+ ...+ +-.|++||+|.||+|+.++||.+-++.|++| +. .+....++..++..|.++++..++||++-.+|
T Consensus 92 ~sP-lksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~v 169 (398)
T KOG2776|consen 92 FSP-LKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQV 169 (398)
T ss_pred cCc-CCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchh
Confidence 976 3322 5789999999999999999999999999999 53 34677899999999999999999999999999
Q ss_pred hHHHHHHHHhhc
Q psy16136 188 HHLANKVVLSKL 199 (332)
Q Consensus 188 ~~a~~~~l~~~g 199 (332)
-+++.+.+.+.+
T Consensus 170 T~~i~k~aas~~ 181 (398)
T KOG2776|consen 170 TRAIVKTAASYG 181 (398)
T ss_pred hHHHHHHHHHhC
Confidence 999999999986
No 39
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.26 E-value=2.3e-12 Score=106.49 Aligned_cols=92 Identities=33% Similarity=0.481 Sum_probs=64.8
Q ss_pred cccccceeEeeeccccCCceeeE-eccCCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhh
Q psy16136 211 ELMEESYFHWAFGVYEPDFYGVI-EMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDI 289 (332)
Q Consensus 211 ~~~~~~~f~~~pGi~~pg~~g~~-~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l 289 (332)
..+|++.|+|++|+..|++.+++ +.+.++.++|.|..++++++|+|.+++.+++++.+|+|+|++.+++. +.+..+
T Consensus 40 ~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~---~~l~~~ 116 (134)
T PF05195_consen 40 PFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELE---EVLSEL 116 (134)
T ss_dssp -----HHHHHHH---STT-EEEEEECTTEEEEEEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHH---HHHHHH
T ss_pred ccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHH---HHHHHH
Confidence 46788899999999999999998 77778999999999999999999999999999999999999999999 999888
Q ss_pred hhcccccce-eeeeCCCCCCC
Q psy16136 290 TAKEWAFKS-LTHPLGLFAPT 309 (332)
Q Consensus 290 ~~~~~~~~~-~~~~~~~~~~~ 309 (332)
. +... +||.+++++++
T Consensus 117 ~----~~~~~~~~~~~~~s~~ 133 (134)
T PF05195_consen 117 L----KRSRTVYYDLGKDSEF 133 (134)
T ss_dssp H----TTTSCEEE-TTB----
T ss_pred H----cCCCEEEEECCCcccC
Confidence 7 3334 99999876654
No 40
>KOG2737|consensus
Probab=99.10 E-value=4e-11 Score=111.37 Aligned_cols=74 Identities=50% Similarity=1.034 Sum_probs=69.5
Q ss_pred ccccccceeEeeeccccCCceeeEeccCCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhh
Q psy16136 210 DELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYL 286 (332)
Q Consensus 210 ~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~ 286 (332)
...+|+++|+|.+|+.+|++.|.++..+|++++|.|+++++|++|+|.+.+.++++++|.+|+|.|.|++. ..+
T Consensus 62 ~lFrQesYF~~lfGV~ep~~yg~idv~tgKstLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~---~~~ 135 (492)
T KOG2737|consen 62 ELFRQESYFAYLFGVREPGFYGAIDVGTGKSTLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEII---QVL 135 (492)
T ss_pred HHHhhhhHHHHhhcCCCccceEEEEecCCceEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHH---HHh
Confidence 34678999999999999999999999999999999999999999999999999999999999999999988 555
No 41
>PRK10879 proline aminopeptidase P II; Provisional
Probab=98.42 E-value=1.1e-06 Score=86.56 Aligned_cols=88 Identities=23% Similarity=0.283 Sum_probs=73.2
Q ss_pred cccccceeEeeeccccCCceeeEecc----CCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhh
Q psy16136 211 ELMEESYFHWAFGVYEPDFYGVIEMT----TGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYL 286 (332)
Q Consensus 211 ~~~~~~~f~~~pGi~~pg~~g~~~~~----~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~ 286 (332)
...|++.|+|++|+..|++..++ .+ ..+.++|.|..|+++++|+|++++.+++++.+|+|+|++.+++. +.+
T Consensus 40 ~Frq~s~F~YltG~~ep~~~lv~-~~~~~~~~~~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~---~~l 115 (438)
T PRK10879 40 PYRQNSDFWYFTGFNEPEAVLVL-IKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEIN---QQL 115 (438)
T ss_pred CccCCCceeeeeCCCCCCeEEEE-ecCCCCCCeEEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHH---HHH
Confidence 56789999999999999976553 22 23579999999999999999999999999999999999999999 888
Q ss_pred hhhhhcccccce-eeeeCCCC
Q psy16136 287 HDITAKEWAFKS-LTHPLGLF 306 (332)
Q Consensus 287 ~~l~~~~~~~~~-~~~~~~~~ 306 (332)
..+. .... +|+.++..
T Consensus 116 ~~~~----~~~~~~~~~~~~~ 132 (438)
T PRK10879 116 YQLL----NGLDVVYHAQGEY 132 (438)
T ss_pred HHHh----cCCceEEecCCcc
Confidence 8776 3334 77776543
No 42
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=95.27 E-value=0.34 Score=41.72 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCC-CCCCCcccCCCC
Q psy16136 51 DVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHA-SAPNDKRVNDGD 129 (332)
Q Consensus 51 ~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~-~~p~~r~l~~Gd 129 (332)
+.++++.+.+..+++.+.+.++||++-.|+...+...+.+. |... .+...++-|..- ..|-.+. ...++.+|++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~-g~~~-~~~~~~Gh~iG~-~~~e~~~~~~~~~~~l~~gm 178 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEH-GLGP-NFGHRTGHGIGL-EIHEPPVLKAGDDTVLEPGM 178 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-Cccc-cCCCCCccccCc-ccCCCCCcCCCCCCCcCCCC
Confidence 56888999999999999999999999999999999988865 4421 111122222211 1221110 012567999999
Q ss_pred eEEEEecceeC-CeeeceeeEEEe
Q psy16136 130 MLVFDMGSSYC-GYASDITCSYPV 152 (332)
Q Consensus 130 ~v~iD~g~~~~-GY~sD~tRT~~v 152 (332)
++.++.+.... ++..-+.-|+.+
T Consensus 179 v~~iep~~~~~~~~g~~~ed~v~v 202 (207)
T cd01066 179 VFAVEPGLYLPGGGGVRIEDTVLV 202 (207)
T ss_pred EEEECCEEEECCCcEEEeeeEEEE
Confidence 99999998766 577778888877
No 43
>PRK13607 proline dipeptidase; Provisional
Probab=95.24 E-value=0.016 Score=57.44 Aligned_cols=65 Identities=12% Similarity=0.285 Sum_probs=50.7
Q ss_pred cccccceeEeeeccc-cCCceeeEeccCC-cEEEEecCCCcccccccCCCCChhH-HHHHcCCceEEEcCccc
Q psy16136 211 ELMEESYFHWAFGVY-EPDFYGVIEMTTG-RSILFAPRLSEDYVVWMGQLPTLDE-YKEKYQVDEVYFSDEVM 280 (332)
Q Consensus 211 ~~~~~~~f~~~pGi~-~pg~~g~~~~~~g-~~ilf~P~~~~~~~iW~G~~p~~e~-~~~~~~~~~v~~~~~i~ 280 (332)
...|++.|+|.+|+. .|++.++++.+.+ ..++|.| .+ +|+|..+..++ |.++|+++.++..+++.
T Consensus 49 ~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~l~~~-~d----~W~g~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (443)
T PRK13607 49 PFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYQP-VD----YWHNVEPLPESFWTEEVDIKALTKADGIA 116 (443)
T ss_pred CcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEEEEec-Cc----cccCCCCCchHHHHHhcChHhcccHHHHH
Confidence 467899999999996 7999999877644 6666665 33 69999886555 68999988887777766
No 44
>KOG2738|consensus
Probab=94.48 E-value=0.16 Score=46.98 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc-----cc-----------------CCcccCccccccccc
Q psy16136 159 KQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL-----LD-----------------IGLLRGTIDELMEES 216 (332)
Q Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g-----~g-----------------hGi~~~~~~~~~~~~ 216 (332)
.+|++-+..+++.+++..++|||+|..||++++.+..-++| ++ ||| +|.+.+..+-
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGI--PD~RpLedGD 201 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGI--PDSRPLEDGD 201 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCC--CCcCcCCCCC
Confidence 34667777889999999999999999999999999998886 11 443 3443333333
Q ss_pred eeEeeeccccCCceee
Q psy16136 217 YFHWAFGVYEPDFYGV 232 (332)
Q Consensus 217 ~f~~~pGi~~pg~~g~ 232 (332)
...+..-+|+.|+.|-
T Consensus 202 IvNiDVtvY~~GyHGD 217 (369)
T KOG2738|consen 202 IVNIDVTVYLNGYHGD 217 (369)
T ss_pred EEeEEEEEEeccccCc
Confidence 4666667777777664
No 45
>KOG2414|consensus
Probab=93.50 E-value=0.093 Score=50.43 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=60.7
Q ss_pred cccccceeEeeeccccCCceeeEe-ccCCc--EEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhh
Q psy16136 211 ELMEESYFHWAFGVYEPDFYGVIE-MTTGR--SILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLH 287 (332)
Q Consensus 211 ~~~~~~~f~~~pGi~~pg~~g~~~-~~~g~--~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~ 287 (332)
+..|++.|.|+.|+.+|+...++. .+... ..+|.|+.+|..+.|.|.+.+.+.+.+-++++++....++. ..+.
T Consensus 101 ~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~---~~L~ 177 (488)
T KOG2414|consen 101 TFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLA---VFLP 177 (488)
T ss_pred eeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHH---HHHH
Confidence 456788899999999999665543 33443 78999999999999999999988888999999888877776 5555
Q ss_pred hh
Q psy16136 288 DI 289 (332)
Q Consensus 288 ~l 289 (332)
..
T Consensus 178 k~ 179 (488)
T KOG2414|consen 178 KM 179 (488)
T ss_pred HH
Confidence 33
No 46
>PLN03158 methionine aminopeptidase; Provisional
Probab=93.30 E-value=0.37 Score=47.05 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=47.7
Q ss_pred CeeeceeeEEEeCCCCC--HHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc
Q psy16136 141 GYASDITCSYPVNGKFT--EKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL 199 (332)
Q Consensus 141 GY~sD~tRT~~v~G~~~--~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g 199 (332)
..++++.|+..+ ..+. +..|++-+.+.++++++.+.++||++-.||++++++.+.++|
T Consensus 126 ~~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~G 185 (396)
T PLN03158 126 EPNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAG 185 (396)
T ss_pred ccccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcC
Confidence 445677788888 5544 456788888899999999999999999999999999987765
No 47
>PRK05716 methionine aminopeptidase; Validated
Probab=93.29 E-value=1.2 Score=40.22 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeee--CCC----CCcccCCCCCCCCCccc
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICAS--GGN----GAVLHYGHASAPNDKRV 125 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~s--G~n----~~~~h~~~~~~p~~r~l 125 (332)
..|++.+.+.++..++++.++||++-.||...+++.+.+. |.... ...++- |.. -.+++|.. ..++.+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~-g~~~~--~~~~GHgiG~~~~e~p~~~~~~~--~~~~~~l 193 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAE-GFSVV--REYCGHGIGRKFHEEPQIPHYGA--PGDGPVL 193 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCeee--cCccccccCCccCCCCccCcCCC--CCCCCEe
Confidence 3566777788888999999999999999999999888764 54321 001111 110 01111110 1246789
Q ss_pred CCCCeEEEEeccee------------------CCeeeceeeEEEe
Q psy16136 126 NDGDMLVFDMGSSY------------------CGYASDITCSYPV 152 (332)
Q Consensus 126 ~~Gd~v~iD~g~~~------------------~GY~sD~tRT~~v 152 (332)
++|.++.++.+... +++..-+.-|+.|
T Consensus 194 e~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~V 238 (252)
T PRK05716 194 KEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAV 238 (252)
T ss_pred cCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEE
Confidence 99999999977653 3355556677777
No 48
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=92.97 E-value=0.17 Score=45.41 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=25.0
Q ss_pred Hhhccc-----CCc--c--cCccccccccce-eEeeeccccCCceee
Q psy16136 196 LSKLLD-----IGL--L--RGTIDELMEESY-FHWAFGVYEPDFYGV 232 (332)
Q Consensus 196 ~~~g~g-----hGi--~--~~~~~~~~~~~~-f~~~pGi~~pg~~g~ 232 (332)
--||.| |.- + ..+.+..++++| |+++|+++.|+.+|+
T Consensus 160 ~GHgIG~~l~~hE~P~i~~~~~~~~~L~~GmvftiEP~iy~~g~~gv 206 (224)
T cd01085 160 TGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSNEPGYYKEGKYGI 206 (224)
T ss_pred CCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEEECCEeEeCCCeEE
Confidence 477777 321 2 334445566665 999999999987775
No 49
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=92.89 E-value=2.1 Score=37.13 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCC-CCCCcccCCCC
Q psy16136 51 DVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHAS-APNDKRVNDGD 129 (332)
Q Consensus 51 ~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~-~p~~r~l~~Gd 129 (332)
+.++++.+.+.++++.+++.++||++-.||...+++.+.+. |... .|...++-|-. ...|-.+.- ..++.+|++|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~-g~~~-~~~~~~Gh~iG-~~~~e~p~i~~~~~~~l~~gm 179 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEA-GYGE-YFIHRTGHGVG-LEVHEAPYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-Cccc-cCCCCCccccC-cccCcCCCcCCCCCCCcCCCC
Confidence 35677888889999999999999999999999998888764 5421 12111111111 011211100 11578899999
Q ss_pred eEEEEecceeCCe-eeceeeEEEe
Q psy16136 130 MLVFDMGSSYCGY-ASDITCSYPV 152 (332)
Q Consensus 130 ~v~iD~g~~~~GY-~sD~tRT~~v 152 (332)
++.++.+....|+ ..-+.-|+.|
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~v 203 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLV 203 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEE
Confidence 9999988765443 3445666766
No 50
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=92.88 E-value=1.7 Score=39.15 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCC------CcccCCCCCCCCCcccC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNG------AVLHYGHASAPNDKRVN 126 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~------~~~h~~~~~~p~~r~l~ 126 (332)
++++.+.+..+++++++.++||++-.|+...+++.+.+. |.... ...++-|-.- .++.+.. ..++.+|+
T Consensus 118 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~-g~~~~--~~~~GHgiG~~~~e~p~i~~~~~--~~~~~~l~ 192 (247)
T TIGR00500 118 AEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAK-GFSVV--REYCGHGIGRKFHEEPQIPNYGK--KFTNVRLK 192 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEec--cCccCCccCcccCCCCccCCcCc--CCCCCEec
Confidence 566777778888899999999999999999998887764 54321 0111111100 1111110 11467899
Q ss_pred CCCeEEEEeccee
Q psy16136 127 DGDMLVFDMGSSY 139 (332)
Q Consensus 127 ~Gd~v~iD~g~~~ 139 (332)
+|.++.++.+...
T Consensus 193 ~gmv~~iEp~i~~ 205 (247)
T TIGR00500 193 EGMVFTIEPMVNT 205 (247)
T ss_pred CCCEEEEeeEEEc
Confidence 9999999987654
No 51
>PRK08671 methionine aminopeptidase; Provisional
Probab=92.86 E-value=2.3 Score=39.62 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCC----CCCCCcccCCC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHA----SAPNDKRVNDG 128 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~----~~p~~r~l~~G 128 (332)
.+++.+.+..+++++++.++||++-.|+...++..+.+. |.... ...++-|-.-...|-.+. ...++.+|++|
T Consensus 103 ~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~-G~~~~--~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~G 179 (291)
T PRK08671 103 YEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSY-GFKPI--RNLTGHGLERYELHAGPSIPNYDEGGGVKLEEG 179 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccc--CCCcccCcCCCcccCCCccCccCCCCCceeCCC
Confidence 456777778889999999999999999999998888754 54321 111111111111221110 11146789999
Q ss_pred CeEEEEeccee-CCeeeceeeEEEe
Q psy16136 129 DMLVFDMGSSY-CGYASDITCSYPV 152 (332)
Q Consensus 129 d~v~iD~g~~~-~GY~sD~tRT~~v 152 (332)
+++.++.+..- .|+..|-.||-..
T Consensus 180 mV~aIEp~~t~G~G~v~~~~~~~iy 204 (291)
T PRK08671 180 DVYAIEPFATDGEGKVVEGPEVEIY 204 (291)
T ss_pred CEEEEcceEECCCCeEecCCceEEE
Confidence 99999977653 5888888887665
No 52
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=92.45 E-value=0.66 Score=42.39 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhc
Q psy16136 159 KQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKL 199 (332)
Q Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g 199 (332)
..|++-+.+.++.+.+.+.++||++..||.+.+++++.++|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~g 53 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKG 53 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcC
Confidence 34556667778888888999999999999999999999754
No 53
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=91.87 E-value=0.92 Score=40.66 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc
Q psy16136 158 EKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL 200 (332)
Q Consensus 158 ~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~ 200 (332)
+..|++.+.+.++++++++.++||++-.||..++++.+.+.|.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~ 44 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGA 44 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999999988874
No 54
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=91.63 E-value=0.95 Score=42.23 Aligned_cols=44 Identities=11% Similarity=0.101 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhccc
Q psy16136 158 EKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLD 201 (332)
Q Consensus 158 ~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~g 201 (332)
+..+++.+.+.++++++++.++||++..||.+.+.+.+.+.|.+
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~ 45 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG 45 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC
Confidence 35788889999999999999999999999999999999988744
No 55
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=91.28 E-value=2.6 Score=38.25 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCC-CCCcceeeeCCCCCcccCCCC--CCCCCcccCCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRH-VAYTCICASGGNGAVLHYGHA--SAPNDKRVNDG 128 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~-~~~~~iv~sG~n~~~~h~~~~--~~p~~r~l~~G 128 (332)
.+|++.+++.++.+++++.++||++-.|+...+...+.+. +.+. ..|..-++.|-.- -.|-.+. ..-++++|++|
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~-~~~~~~~~~~~~GHgiGl-e~hE~~~~l~~~~~~~L~~G 197 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK-KPELEPNFTKNLGFGIGL-EFRESSLIINAKNDRKLKKG 197 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh-ChhHHHhCcCCcccccCc-ccccCccccCCCCCCCcCCC
Confidence 4667788888999999999999999999999998887754 3111 1111112221110 1111000 01146889999
Q ss_pred CeEEEEecce-e----------CCeeeceeeEEEe
Q psy16136 129 DMLVFDMGSS-Y----------CGYASDITCSYPV 152 (332)
Q Consensus 129 d~v~iD~g~~-~----------~GY~sD~tRT~~v 152 (332)
.++.+..|.. . +.|..-++-|+.|
T Consensus 198 Mvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~V 232 (243)
T cd01091 198 MVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILV 232 (243)
T ss_pred CEEEEeCCcccccCccccCccCCeeEEEEEEEEEE
Confidence 9999999886 2 2577778899988
No 56
>PRK12896 methionine aminopeptidase; Reviewed
Probab=90.92 E-value=4.3 Score=36.65 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCC-----CCC-CCcccC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHA-----SAP-NDKRVN 126 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~-----~~p-~~r~l~ 126 (332)
.+++.+.+.+++.++++.++||++-.|+...+.+.+.+. |.... ...++-|..- ..|..+. ..+ ++.+|+
T Consensus 125 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~-G~~~~--~~~~GHgiG~-~~he~p~~~~~~~~~~~~~~le 200 (255)
T PRK12896 125 AEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKN-GYSVV--RDLTGHGVGR-SLHEEPSVILTYTDPLPNRLLR 200 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEec--cCcccCCcCc-ccccCCCccccCCCCCCCCEec
Confidence 456677777888899999999999999999998888764 54211 1111111100 1121110 012 367899
Q ss_pred CCCeEEEEecce------------------eCCeeeceeeEEEe
Q psy16136 127 DGDMLVFDMGSS------------------YCGYASDITCSYPV 152 (332)
Q Consensus 127 ~Gd~v~iD~g~~------------------~~GY~sD~tRT~~v 152 (332)
+|.++.++.+.. .+++..-+.-|+.|
T Consensus 201 ~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~v 244 (255)
T PRK12896 201 PGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVV 244 (255)
T ss_pred CCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEE
Confidence 999999997664 23455557777777
No 57
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=90.61 E-value=3 Score=40.57 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCC---CCCC-CCcccCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGH---ASAP-NDKRVND 127 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~---~~~p-~~r~l~~ 127 (332)
.++++.+++.++..++++.++||++-.|+...++..+.+. |.....+ .=-+-|-.. .+++.. .-.+ ++.+|++
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~-G~~~~h~-~GhgiGl~~-~~~~~e~~~~l~~~~~~~L~~ 347 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKY-GIHKDSR-TGYPIGLSY-PPDWGERTMSLRPGDNTVLKP 347 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccCCC-ceeeeccCc-CCCCCCccccccCCCCceecC
Confidence 3667788889999999999999999999999998887754 5432111 000112111 011000 0012 4678999
Q ss_pred CCeEEEEecceeCCeeeceeeEEEe
Q psy16136 128 GDMLVFDMGSSYCGYASDITCSYPV 152 (332)
Q Consensus 128 Gd~v~iD~g~~~~GY~sD~tRT~~v 152 (332)
|-++.+.-|....|+..-+.-|+.|
T Consensus 348 GMv~tvEpgiy~~~~Gvried~v~V 372 (391)
T TIGR02993 348 GMTFHFMTGLWMEDWGLEITESILI 372 (391)
T ss_pred CCEEEEcceeEeCCCCeEEeeEEEE
Confidence 9999999988776665667777877
No 58
>PRK12897 methionine aminopeptidase; Reviewed
Probab=90.33 E-value=3.5 Score=37.32 Aligned_cols=82 Identities=10% Similarity=0.036 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCC----C-CCCCcccCC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHA----S-APNDKRVND 127 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~----~-~p~~r~l~~ 127 (332)
.|++.+.+..+..++++.++||++-.|+...++..+.+. |... +...++-|..- ..|-.+. . ..++.+|++
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~-g~~~--~~~~~GHgiGl-~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANE-GFSV--ARDFTGHGIGK-EIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHc-CCcc--CCCeEECccCC-cccCCCccCCCCCCCCCCCcCC
Confidence 556667788888999999999999999999998887754 5432 12223322211 1221110 0 113568999
Q ss_pred CCeEEEEecce
Q psy16136 128 GDMLVFDMGSS 138 (332)
Q Consensus 128 Gd~v~iD~g~~ 138 (332)
|.++.+.-|..
T Consensus 195 Gmv~tiEP~~~ 205 (248)
T PRK12897 195 GMVITIEPIVN 205 (248)
T ss_pred CCEEEECCeEe
Confidence 99999988775
No 59
>PRK12318 methionine aminopeptidase; Provisional
Probab=90.32 E-value=3.7 Score=38.31 Aligned_cols=84 Identities=11% Similarity=0.095 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCC-----CCCcccC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASA-----PNDKRVN 126 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~-----p~~r~l~ 126 (332)
.+|++.+.+.++.+++++.++||++-.|+...+...+.+. |..... ..++-|..- ..|-.+ .. .++.+|+
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~-G~~~~~--~~~GHgIGl-~~hE~P-~i~~~~~~~~~~L~ 233 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKY-GFSVVD--QFVGHGVGI-KFHENP-YVPHHRNSSKIPLA 233 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCC--CcccCCcCc-cccCCC-cccCcCCCCCCEeC
Confidence 3567788888999999999999999999999998888754 543111 112211111 112111 01 1346799
Q ss_pred CCCeEEEEecceeC
Q psy16136 127 DGDMLVFDMGSSYC 140 (332)
Q Consensus 127 ~Gd~v~iD~g~~~~ 140 (332)
+|.++.+.-+....
T Consensus 234 ~GMV~~iEP~i~~~ 247 (291)
T PRK12318 234 PGMIFTIEPMINVG 247 (291)
T ss_pred CCCEEEECCEEEcC
Confidence 99999998776543
No 60
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=89.08 E-value=2.8 Score=39.22 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCC---C-CCCCCcccCCC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGH---A-SAPNDKRVNDG 128 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~---~-~~p~~r~l~~G 128 (332)
.++..+.+..+.+++++.++||++-.|+...++..+.+. |.... ...++-|-....+|-.. . ...++.++++|
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~-G~~~i--~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~G 182 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESY-GVKPI--SNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEG 182 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCeee--cCCCCcceecccccCCCccCeecCCCCCEeCCC
Confidence 466777888889999999999999999999999888754 54321 01111111101122100 0 11245789999
Q ss_pred CeEEEEeccee-CCeeeceeeEEEe
Q psy16136 129 DMLVFDMGSSY-CGYASDITCSYPV 152 (332)
Q Consensus 129 d~v~iD~g~~~-~GY~sD~tRT~~v 152 (332)
+++.++.+... .|+..|..+|-..
T Consensus 183 mV~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 183 DVVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred CEEEEceeEECCcCeEecCCCeEEE
Confidence 99999977653 4777777765433
No 61
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=89.07 E-value=5.8 Score=35.48 Aligned_cols=98 Identities=9% Similarity=-0.069 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCC------CCCCCccc
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHA------SAPNDKRV 125 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~------~~p~~r~l 125 (332)
..|++.+++.++++++++.++||++-.|+.+.++..+.+. |.... +.--++-|.. ...|..+. ...++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~-G~~~~-~~~~~GHgiG-l~~he~~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREH-DLLRY-RTFGYGHSFG-VLSHYYGREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCcc-cccccCcccc-cccccCCCccccccCCCCCCcc
Confidence 3667888889999999999999999999999999888764 54321 0000110110 01221100 01146889
Q ss_pred CCCCeEEEEecceeC----C-eeeceeeEEEe
Q psy16136 126 NDGDMLVFDMGSSYC----G-YASDITCSYPV 152 (332)
Q Consensus 126 ~~Gd~v~iD~g~~~~----G-Y~sD~tRT~~v 152 (332)
++|.++.++-+..+. | .-.-+..|+.|
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~V 218 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVI 218 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEE
Confidence 999999999887652 2 12236777777
No 62
>PRK15173 peptidase; Provisional
Probab=88.08 E-value=7 Score=37.00 Aligned_cols=99 Identities=11% Similarity=-0.010 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCC-cccCCCCCC-CCCcccCCCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGA-VLHYGHASA-PNDKRVNDGD 129 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~-~~h~~~~~~-p~~r~l~~Gd 129 (332)
..|++.+++.++..++++.++||++-.|+.......+.+. |.... +...++-|..-. ..|..+... .++.+|++|.
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GM 280 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRGHLGHGNGVFLGLEESPFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCC
Confidence 4567788888999999999999999999999988887754 54321 111111111110 112111011 2467899999
Q ss_pred eEEEEecceeCC-eeeceeeEEEe
Q psy16136 130 MLVFDMGSSYCG-YASDITCSYPV 152 (332)
Q Consensus 130 ~v~iD~g~~~~G-Y~sD~tRT~~v 152 (332)
++.+..|....| +..-+.-|+.|
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlV 304 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILI 304 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEE
Confidence 999988765322 33456778877
No 63
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=87.84 E-value=6.4 Score=35.09 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC---C-C--CCcceeeeCCCCCcccCCCCCCCCCcc
Q psy16136 51 DVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR---H-V--AYTCICASGGNGAVLHYGHASAPNDKR 124 (332)
Q Consensus 51 ~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~---~-~--~~~~iv~sG~n~~~~h~~~~~~p~~r~ 124 (332)
...+++.+.+.++.+++++.++||++-.||...+++.+.+. |+. . . ...-.++++++.. .-...
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~-G~~~~~~~~~h~~g~~~~~~~~~~---------~~~~~ 189 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY-GCTPVEGVLSHQLKRVVSSGEGKA---------KLVEC 189 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc-CCEEecCccccCcCceEecCCCCc---------cchhh
Confidence 35677888888999999999999999999999998888764 521 1 0 0011122221110 02456
Q ss_pred cCCCCeEEEEecceeCC-eeeceeeEEEe
Q psy16136 125 VNDGDMLVFDMGSSYCG-YASDITCSYPV 152 (332)
Q Consensus 125 l~~Gd~v~iD~g~~~~G-Y~sD~tRT~~v 152 (332)
+++|-++.+..+....| +..-+.-|+.|
T Consensus 190 l~~gmvf~~ep~~~~~g~~~~~~~~Tv~v 218 (228)
T cd01089 190 VKHGLLFPYPVLYEKEGEVVAQFKLTVLL 218 (228)
T ss_pred ccCCcccccceeEccCCCeEEEEEEEEEE
Confidence 89999999998887654 77888889988
No 64
>KOG2775|consensus
Probab=87.57 E-value=3.3 Score=38.52 Aligned_cols=89 Identities=16% Similarity=0.272 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHH----HHHhhcccCCc-----------------ccCccccccccc
Q psy16136 158 EKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANK----VVLSKLLDIGL-----------------LRGTIDELMEES 216 (332)
Q Consensus 158 ~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~----~l~~~g~ghGi-----------------~~~~~~~~~~~~ 216 (332)
.+.++..++-+++.....+.+|||+++-||-+.... .+.+.|..-|| -.++.+.+-++-
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~SlN~cAAHyTpNaGd~tVLqydD 165 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCSLNHCAAHYTPNAGDKTVLKYDD 165 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCcccccchhhhcCCCCCCceeeeecc
Confidence 345666777778888899999999999888776554 44455543333 123444444555
Q ss_pred eeEeeeccccCCceeeEeccCCcEEEEecCCCcc
Q psy16136 217 YFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSED 250 (332)
Q Consensus 217 ~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~ 250 (332)
+..+..|.+..| .+ ++.--++.|-|..++-
T Consensus 166 V~KiDfGthi~G--rI--iDsAFTv~F~p~~d~L 195 (397)
T KOG2775|consen 166 VMKIDFGTHIDG--RI--IDSAFTVAFNPKYDPL 195 (397)
T ss_pred eEEEeccccccC--eE--eeeeeEEeeCccccHH
Confidence 566777777654 23 3455678888988653
No 65
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=87.51 E-value=9.5 Score=33.10 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceee--eCCCCC--cccCCCCCCCCCcccCCC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICA--SGGNGA--VLHYGHASAPNDKRVNDG 128 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~n~~--~~h~~~~~~p~~r~l~~G 128 (332)
.+++.+.+.+++..+++.++||+|-.|+.+.+.+.+.+. |.. ..++..++ -|.... .|... ..-++.+|++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~-g~~-~~~~~~~GH~iG~~~~~~~P~i~--~~~~~~~l~~g 179 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEY-GLE-EPYPHGLGHGIGLEFHEPGPNIA--RPGDDTVLEPG 179 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHT-TEG-EEBTSSSEEEESSSSSEEEEEES--STTTSSB--TT
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhh-ccc-ceeeecccccccccccccceeee--cccccceecCC
Confidence 677778888899999999999999999999999998865 541 11111122 121111 12210 01167899999
Q ss_pred CeEEEEecce-eCCe-eeceeeEEEe
Q psy16136 129 DMLVFDMGSS-YCGY-ASDITCSYPV 152 (332)
Q Consensus 129 d~v~iD~g~~-~~GY-~sD~tRT~~v 152 (332)
-++.++.+.. ..|. ..-+.-|+.|
T Consensus 180 mv~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 180 MVFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp BEEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred CceeEeeeEEccCCCcEEEEEEEEEE
Confidence 9999998765 3332 4444444444
No 66
>PRK09795 aminopeptidase; Provisional
Probab=87.37 E-value=5.7 Score=38.12 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCC-CCCCcc
Q psy16136 46 TELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHAS-APNDKR 124 (332)
Q Consensus 46 s~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~-~p~~r~ 124 (332)
.++|-+.++++.+++.++..++++.++||++-.|+...+++.+.+. |... .|.--++-|.. ...|-.+.- ..++.+
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~-g~~~-~~~h~~GHgiG-l~~he~p~i~~~~~~~ 311 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEA-GYGD-YFGHNTGHAIG-IEVHEDPRFSPRDTTT 311 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCc-cCCCCCCccCC-ccccCCCCcCCCCCCC
Confidence 3555456788999999999999999999999999999999888764 5432 12111111111 112211101 114688
Q ss_pred cCCCCeEEEEecceeCCe-eeceeeEEEe
Q psy16136 125 VNDGDMLVFDMGSSYCGY-ASDITCSYPV 152 (332)
Q Consensus 125 l~~Gd~v~iD~g~~~~GY-~sD~tRT~~v 152 (332)
|++|.++.|..|....|. ..-+.-|+.|
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 999999999988865442 2445666776
No 67
>PRK14575 putative peptidase; Provisional
Probab=87.21 E-value=7.5 Score=38.03 Aligned_cols=99 Identities=11% Similarity=-0.007 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCC-CcccCCCCCC-CCCcccCCCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNG-AVLHYGHASA-PNDKRVNDGD 129 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~-~~~h~~~~~~-p~~r~l~~Gd 129 (332)
..|++.+++.++..++++.++||++-.|+.+.+.+.+.+. |.... +...++-|... ...|..+... -++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRGHLGHGNGVFLGLEESPFVSTHATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCcccCCCCCccCCCCCCCCCCCcCCCC
Confidence 3567777888999999999999999999999998887754 54321 11111111110 0112111011 1467899999
Q ss_pred eEEEEecceeCC-eeeceeeEEEe
Q psy16136 130 MLVFDMGSSYCG-YASDITCSYPV 152 (332)
Q Consensus 130 ~v~iD~g~~~~G-Y~sD~tRT~~v 152 (332)
++.+..|....| +..-+.-|+.|
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlV 387 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILI 387 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEE
Confidence 999998875433 33557788887
No 68
>PRK07281 methionine aminopeptidase; Reviewed
Probab=86.18 E-value=11 Score=35.15 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCC----C-CCCCcccC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHA----S-APNDKRVN 126 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~----~-~p~~r~l~ 126 (332)
..|++.+++.+++.++++.++||++-.||...++..+.+. |... +...++-|..- ..|-.+. . ..++.+|+
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~-G~~~--~~~~~GHGIGl-~~hE~P~i~~~~~~~~~~~Le 224 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESR-GYGV--VRDLVGHGVGP-TMHEEPMVPNYGTAGRGLRLR 224 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCcc--CCCeeeeeCCC-ccCCCCcCCCcccCCCCCEEC
Confidence 3578888999999999999999999999999988887653 5432 21122222211 1221100 0 11456899
Q ss_pred CCCeEEEEeccee
Q psy16136 127 DGDMLVFDMGSSY 139 (332)
Q Consensus 127 ~Gd~v~iD~g~~~ 139 (332)
+|.++.+.-+...
T Consensus 225 ~GMV~tiEPgiy~ 237 (286)
T PRK07281 225 EGMVLTIEPMINT 237 (286)
T ss_pred CCCEEEECCeeEc
Confidence 9999999988754
No 69
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=85.79 E-value=9.9 Score=36.75 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCC-CCcccCCCC-CCC-CCcccCCCC
Q psy16136 53 MRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGN-GAVLHYGHA-SAP-NDKRVNDGD 129 (332)
Q Consensus 53 mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n-~~~~h~~~~-~~p-~~r~l~~Gd 129 (332)
+|+..++..+++.+++++++||++=.|+.+..++.+.+. |.. ..|.--.+-|.. ....|-.+. ..+ ++.+|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~-g~~-~~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKA-GYG-LYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhc-CCc-ccccCCccccCCCCcccCcCccccCCCCCccccCCc
Confidence 457778888999999999999999999999999998864 322 112111111111 011221110 112 577899999
Q ss_pred eEEEEeccee-CCeeeceeeEEEe
Q psy16136 130 MLVFDMGSSY-CGYASDITCSYPV 152 (332)
Q Consensus 130 ~v~iD~g~~~-~GY~sD~tRT~~v 152 (332)
++.++.|..+ +++-.-+..++.|
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlV 365 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLV 365 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEE
Confidence 9999999664 5688889999998
No 70
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=85.67 E-value=13 Score=33.26 Aligned_cols=100 Identities=9% Similarity=-0.035 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhC---CCC-------------CCCCcceeeeCCCCCcccCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVG---GSR-------------HVAYTCICASGGNGAVLHYG 115 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~---g~~-------------~~~~~~iv~sG~n~~~~h~~ 115 (332)
..+++.+.+.++++++++.++||++-.|+...+.+.+.+.+ |.. ...|.--++-|.. ..+|-.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiG-l~~~e~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLG-LDVHDV 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccC-cccccC
Confidence 35567777888999999999999999999988887775431 110 0011100111110 112211
Q ss_pred CC---CCCCCcccCCCCeEEEEecceeCC-----------eeeceeeEEEe
Q psy16136 116 HA---SAPNDKRVNDGDMLVFDMGSSYCG-----------YASDITCSYPV 152 (332)
Q Consensus 116 ~~---~~p~~r~l~~Gd~v~iD~g~~~~G-----------Y~sD~tRT~~v 152 (332)
+. ...++.+|++|-++.+..+....+ +..-+.-|+.|
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~V 233 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLV 233 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEE
Confidence 00 012467899999999998886543 55556777777
No 71
>PRK14576 putative endopeptidase; Provisional
Probab=84.40 E-value=13 Score=36.30 Aligned_cols=99 Identities=12% Similarity=-0.018 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCC-CcccCCCC-CCCCCcccCCCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNG-AVLHYGHA-SAPNDKRVNDGD 129 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~-~~~h~~~~-~~p~~r~l~~Gd 129 (332)
..+++.+++.++.+++++.++||++-.|+...+...+.+. |.... +..-++-|... ...|..+. ...++.+|++|.
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GM 362 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTS-GLPHY-NRGHLGHGDGVFLGLEEVPFVSTQATETFCPGM 362 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCC
Confidence 4667788889999999999999999999999998887754 54321 11111111110 00111110 111467899999
Q ss_pred eEEEEecceeCC-eeeceeeEEEe
Q psy16136 130 MLVFDMGSSYCG-YASDITCSYPV 152 (332)
Q Consensus 130 ~v~iD~g~~~~G-Y~sD~tRT~~v 152 (332)
++.++.+....| ...-+.-|+.|
T Consensus 363 v~~vEp~~y~~g~ggvriEDtvlV 386 (405)
T PRK14576 363 VLSLETPYYGIGVGSIMLEDMILI 386 (405)
T ss_pred EEEECCceeecCCCEEEEeeEEEE
Confidence 999986654333 22336777777
No 72
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=84.06 E-value=11 Score=36.83 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCC-C-----cceeeeCCCCCcccCCCCC--CC-CC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVA-Y-----TCICASGGNGAVLHYGHAS--AP-ND 122 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~-~-----~~iv~sG~n~~~~h~~~~~--~p-~~ 122 (332)
..+.+...+..|+.++++.++||++-.||...++..+.+. |+.... + ...+.-|....++++.. . .+ .+
T Consensus 139 ~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~-G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~-~~~~~~~~ 216 (389)
T TIGR00495 139 RKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSY-GCTPVEGMLSHQLKQHVIDGEKVIISNPSD-SQKKDHDT 216 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc-CCeecCCceeecccceeccCCCeeeecCCc-cccCCCCC
Confidence 3555666777888999999999999999999999988754 543210 0 01111111121233211 0 01 24
Q ss_pred cccCCCCeEEEEeccee-CCeeecee-eEE
Q psy16136 123 KRVNDGDMLVFDMGSSY-CGYASDIT-CSY 150 (332)
Q Consensus 123 r~l~~Gd~v~iD~g~~~-~GY~sD~t-RT~ 150 (332)
..+++|+++.||....- .|+..+.. ||-
T Consensus 217 ~~le~gev~aIEp~vs~G~g~v~~~~~~~t 246 (389)
T TIGR00495 217 AEFEENEVYAVDILVSTGEGKAKDADQRTT 246 (389)
T ss_pred CEecCCCEEEEeeeecCCCceEEECCCeeE
Confidence 57999999999988764 45555444 443
No 73
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=83.26 E-value=9.8 Score=37.98 Aligned_cols=100 Identities=12% Similarity=0.142 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC--CCCC--cce---eeeCCCCCcccCCC---C-CCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR--HVAY--TCI---CASGGNGAVLHYGH---A-SAP 120 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~--~~~~--~~i---v~sG~n~~~~h~~~---~-~~p 120 (332)
..+...+.+..|..++++.++||++-.||.+.++..+.+. |.. +-.| .++ ++-|-.-...|-.. . ...
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~-G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~ 342 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESY-EVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGG 342 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCcccCcccccccccCCcccCCCCccccCCCcCCeeCCC
Confidence 3556777788899999999999999999999999998864 532 1111 111 22121111123100 0 011
Q ss_pred CCcccCCCCeEEEEeccee-CCeeeceeeEEEe
Q psy16136 121 NDKRVNDGDMLVFDMGSSY-CGYASDITCSYPV 152 (332)
Q Consensus 121 ~~r~l~~Gd~v~iD~g~~~-~GY~sD~tRT~~v 152 (332)
+..++++|+++.|+..+.- .||..|-.+|-..
T Consensus 343 ~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 343 ENTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred CCCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 3568999999999977664 6888886665443
No 74
>KOG2801|consensus
Probab=34.57 E-value=37 Score=31.55 Aligned_cols=45 Identities=18% Similarity=0.122 Sum_probs=38.5
Q ss_pred HHHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy16136 7 IALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRIS 60 (332)
Q Consensus 7 ~~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia 60 (332)
.-.+..|...+|+.+|+ ++-+.+-.+-..-|-+|-++.++|++|.
T Consensus 115 rkilKOGanqfpdisfc---------palpavvalllhysideaecfekacril 159 (559)
T KOG2801|consen 115 RKILLCLANQFPDISFC---------PALPAVVALLLHYSIDEAECFEKACRIL 159 (559)
T ss_pred HHHHHHHhccCCCcccC---------cchHHHHHHHHHhcccHHHHHHHhheee
Confidence 44677889999999999 5677788888889999999999999874
No 75
>KOG1189|consensus
Probab=32.13 E-value=2.2e+02 Score=30.27 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCC-CCCcceee------eCCCCCcccCCCCCCCCCcc
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRH-VAYTCICA------SGGNGAVLHYGHASAPNDKR 124 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~-~~~~~iv~------sG~n~~~~h~~~~~~p~~r~ 124 (332)
.|.++....-.+..+++..++||.+-.++.......+.+. +-+. ..|.--.+ +-+++.+.. .-++++
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~-~Pel~~~~~k~lG~~iGlEFREssl~in-----aKnd~~ 331 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN-KPELVPNFTKNLGFGIGLEFRESSLVIN-----AKNDRV 331 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc-Ccchhhhhhhhcccccceeeeccccccc-----ccchhh
Confidence 3567777777788889999999999999998888887753 2110 11111111 222333222 226799
Q ss_pred cCCCCeEEEEecce-------eCCeeeceeeEEEeCCC
Q psy16136 125 VNDGDMLVFDMGSS-------YCGYASDITCSYPVNGK 155 (332)
Q Consensus 125 l~~Gd~v~iD~g~~-------~~GY~sD~tRT~~v~G~ 155 (332)
|+.|.++.|.+|.. -+.|.--++-|+.| |+
T Consensus 332 lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv-~e 368 (960)
T KOG1189|consen 332 LKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLV-GE 368 (960)
T ss_pred hccCcEEEEeeccccccCcccccchhhhccceeee-cC
Confidence 99999999999974 23477778899999 53
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=29.54 E-value=1.8e+02 Score=30.28 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=44.0
Q ss_pred HHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCC-CCCCcceeeeCC----C-CCcccCCCCCCCCCcccCCCCeEEEEec
Q psy16136 63 AHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR-HVAYTCICASGG----N-GAVLHYGHASAPNDKRVNDGDMLVFDMG 136 (332)
Q Consensus 63 ~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~-~~~~~~iv~sG~----n-~~~~h~~~~~~p~~r~l~~Gd~v~iD~g 136 (332)
.-+.++..++||.+-.+|...+...+.+. |-+ .+.|.-.++++. + +..+- ..-++|+||.|+++.+.+|
T Consensus 310 lQk~i~~~~rpG~~~g~iY~~~~~yi~~~-~pel~pnF~~nvG~~igiefR~s~~~~----nvkn~r~lq~g~~fnis~g 384 (1001)
T COG5406 310 LQKYILGLVRPGTDSGIIYSEAEKYISSN-GPELGPNFIYNVGLMIGIEFRSSQKPF----NVKNGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHhc-CCccCchHhhhhhhhccccccccccce----eccCCceeccccEEEEeec
Confidence 33456668899999999999888887754 322 233322233222 1 12222 1236799999999999986
Q ss_pred c
Q psy16136 137 S 137 (332)
Q Consensus 137 ~ 137 (332)
-
T Consensus 385 f 385 (1001)
T COG5406 385 F 385 (1001)
T ss_pred c
Confidence 4
No 77
>TIGR02531 yecD_yerC TrpR-related protein YerC/YecD. This model represents a protein subfamily found mostly in the Firmicutes (Bacillus and allies). This family is similar in sequence to the trp operon repressor TrpR described by TIGR01321, and represents a distinct clade within the broader family described by pfam01371. At least one species, Xylella fastidiosa, in the Proteobacteria, has a member of both this family and TIGR01321. Several genomes with a member of this family do not synthesize tryptophan, and members of this family should not be considered trp operon repressors without new evidence.
Probab=28.46 E-value=2.6e+02 Score=21.09 Aligned_cols=33 Identities=21% Similarity=0.151 Sum_probs=22.6
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHH
Q psy16136 44 IKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIF 84 (332)
Q Consensus 44 iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~ 84 (332)
+-||+|++. ++.+ ..+...+..|.|-.+|+..+
T Consensus 28 l~t~~e~~~------Ls~R--~~I~~ll~~G~S~~eIA~~L 60 (88)
T TIGR02531 28 IATINEIQS------LAQR--LQVAKMLKQGKTYSDIEAET 60 (88)
T ss_pred hCCHHHHHh------hhHH--HHHHHHHHCCCCHHHHHHHH
Confidence 445555542 5555 66777788999999998765
No 78
>COG1084 Predicted GTPase [General function prediction only]
Probab=28.21 E-value=2.7e+02 Score=26.62 Aligned_cols=87 Identities=13% Similarity=0.049 Sum_probs=49.3
Q ss_pred HHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHH
Q psy16136 11 LIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILY 90 (332)
Q Consensus 11 ~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~ 90 (332)
+.++.++-...|.....-+. ....+..+|.-||+.+...+|+++ +..+...++-=-.+.+....++..+.+
T Consensus 90 d~~k~sLs~v~~A~~~i~~l---~~eYi~~lk~a~~~~~~~~lrR~a------~GR~aSiik~i~~~L~fL~~~r~~l~~ 160 (346)
T COG1084 90 DHLKISLSAVSWASKIIEKL---AREYIRLLKAAKDPKEANQLRRQA------FGRVASIIKKIDDDLEFLRKARDHLKK 160 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCChhHHHHHHHHH------HHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 45666666666663332222 567777888888888887777664 344444444333445555666666664
Q ss_pred hCCCCCCCCcceeeeCC
Q psy16136 91 VGGSRHVAYTCICASGG 107 (332)
Q Consensus 91 ~~g~~~~~~~~iv~sG~ 107 (332)
--.. .+.-++++-+|.
T Consensus 161 LP~I-dp~~pTivVaG~ 176 (346)
T COG1084 161 LPAI-DPDLPTIVVAGY 176 (346)
T ss_pred CCCC-CCCCCeEEEecC
Confidence 3222 233445555553
No 79
>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development. The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.
Probab=27.43 E-value=30 Score=25.76 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=28.4
Q ss_pred HHHHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHH
Q psy16136 6 LIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMR 54 (332)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr 54 (332)
|.-++++|.+.+|+++-..--+ .+....--.|.|++|++.|-
T Consensus 25 F~DvL~~I~~vlp~aT~tAFeY-------EDE~gDRITVRSDeEm~AMl 66 (91)
T cd06395 25 FRDVLDVIGQVLPEATTTAFEY-------EDEDGDRITVRSDEEMKAML 66 (91)
T ss_pred HHHHHHHHHHhcccccccceee-------ccccCCeeEecchHHHHHHH
Confidence 5678899999999999883222 22222223588999998664
No 80
>PRK05728 DNA polymerase III subunit chi; Validated
Probab=24.30 E-value=4e+02 Score=21.81 Aligned_cols=104 Identities=12% Similarity=0.066 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCC--CcccCCCCCCCCCcccCCCC
Q psy16136 52 VMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNG--AVLHYGHASAPNDKRVNDGD 129 (332)
Q Consensus 52 ~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~--~~~h~~~~~~p~~r~l~~Gd 129 (332)
..+.+|++++++++.-.+.+--.-++ +.+..+...+..- ...+|.|-...|... ..|=.. +. ++..-..++
T Consensus 14 ~~~~~c~L~~ka~~~g~rv~I~~~d~-~~a~~lD~~LW~~---~~~sFlPH~~~~~~~~~~~PV~l--~~-~~~~~~~~~ 86 (142)
T PRK05728 14 LEALLCELAEKALRAGWRVLVQCEDE-EQAEALDEALWTF---RDESFLPHGLAGEGPAAGQPVLL--TW-PGKRNANHR 86 (142)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhcCC---CCCcCCCCCcCCCCCCCCCCEEE--Ec-CCCCCCCCC
Confidence 67788999988877655444333344 4556666665532 223444433333321 111000 00 111223455
Q ss_pred eEEEEecceeCCeeeceeeEEEeCCCCCHHHHHH
Q psy16136 130 MLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYI 163 (332)
Q Consensus 130 ~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~ 163 (332)
-++|.+....-.+.+...|.+-+-|. +++.++.
T Consensus 87 ~~LinL~~~~p~~~~~F~Rvieiv~~-d~~~~~~ 119 (142)
T PRK05728 87 DLLINLDGAVPAFAAAFERVVDFVGY-DEAAKQA 119 (142)
T ss_pred cEEEECCCCCcchhhcccEEEEEeCC-CHHHHHH
Confidence 67777777777888899999765343 5555444
No 81
>PF15200 KRTDAP: Keratinocyte differentiation-associated
Probab=24.25 E-value=52 Score=23.81 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=22.4
Q ss_pred HHHHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhc
Q psy16136 6 LIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVI 44 (332)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~i 44 (332)
-++||+.|++.+|=..|. +-+-+..+|+.
T Consensus 44 WHalfe~iK~kLPFlNWd----------afPKlKGlRSa 72 (77)
T PF15200_consen 44 WHALFEAIKRKLPFLNWD----------AFPKLKGLRSA 72 (77)
T ss_pred HHHHHHHHHHhCcccchh----------hhhhhcccccc
Confidence 478999999999988887 45666677753
No 82
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=24.04 E-value=84 Score=23.24 Aligned_cols=51 Identities=16% Similarity=0.241 Sum_probs=33.0
Q ss_pred CcccCCCCeEEEEeccee-CCeeecee------eEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy16136 122 DKRVNDGDMLVFDMGSSY-CGYASDIT------CSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGV 182 (332)
Q Consensus 122 ~r~l~~Gd~v~iD~g~~~-~GY~sD~t------RT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~ 182 (332)
++..++||.|.+++-+.. +|-.-|.+ .+|.+ |.- .+..+.+.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~-g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRL-GSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEET-TSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeee-ccC---------ccccchhhhcccccCCC
Confidence 356789999999998876 66666655 55665 431 13335556666666663
No 83
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=23.78 E-value=2.9e+02 Score=20.08 Aligned_cols=53 Identities=13% Similarity=0.153 Sum_probs=31.8
Q ss_pred hhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEE
Q psy16136 71 VSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVF 133 (332)
Q Consensus 71 i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~i 133 (332)
++.|.|-.|++..++..+.+. +.|. ++ .|.+.. |... ..+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~-----f~~A-~v-~g~s~~--~~gq-~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQ-----FKYA-LV-WGSSVK--HSPQ-RVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHh-----CCee-EE-eccCCc--CCCe-ECCCCCEecCCCEEEE
Confidence 356899999999888766532 2222 22 132221 1111 3446889999999976
No 84
>PRK10945 gene expression modulator; Provisional
Probab=22.75 E-value=1.4e+02 Score=21.65 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=28.3
Q ss_pred chHHHHHHHHhcCCHHHHHHHHHHH--HHHHHHHHHHHHH
Q psy16136 33 IYHGIIRYSRVIKTELELDVMRYAS--RISSEAHRSVMRK 70 (332)
Q Consensus 33 d~~~~i~~lR~iKs~~EI~~mr~A~--~ia~~~~~~~~~~ 70 (332)
.+..+++..|..-+..|++.+-.|+ +.|+..+....+.
T Consensus 23 TLEkvie~~~~~L~~~E~~~f~~AaDHR~AEL~~~KLyDk 62 (72)
T PRK10945 23 TLERVIEKNKYELSDDELAVFYSAADHRLAELTMNKLYDK 62 (72)
T ss_pred HHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhchhHhh
Confidence 4667888899999999999888887 4555555555553
No 85
>PF15187 Augurin: Oesophageal cancer-related gene 4
Probab=22.63 E-value=22 Score=27.62 Aligned_cols=32 Identities=19% Similarity=0.538 Sum_probs=28.2
Q ss_pred cccccccCCCCChhHHHHHc---CCceEEEcCccc
Q psy16136 249 EDYVVWMGQLPTLDEYKEKY---QVDEVYFSDEVM 280 (332)
Q Consensus 249 ~~~~iW~G~~p~~e~~~~~~---~~~~v~~~~~i~ 280 (332)
+...+|.-.+|....|-++| |.|++++|++|.
T Consensus 38 ~kR~lWDRsrPdVQQW~qQFlYmGFDEak~E~Dls 72 (114)
T PF15187_consen 38 QKRQLWDRSRPDVQQWYQQFLYMGFDEAKFEDDLS 72 (114)
T ss_pred HHHhhhccCCHHHHHHHHHHHHhcchHHHhhhhHH
Confidence 45778999999999999888 999999999976
No 86
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=22.26 E-value=1.6e+02 Score=18.89 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=32.8
Q ss_pred cCCHHHHHHHHHHHHHHHHH-HHHHHHHhhCCccHHHHHHHHHH
Q psy16136 44 IKTELELDVMRYASRISSEA-HRSVMRKVSAGMYEYQAEAIFKH 86 (332)
Q Consensus 44 iKs~~EI~~mr~A~~ia~~~-~~~~~~~i~pG~tE~ei~~~~~~ 86 (332)
--|++|-+.+.+|...-... ...+.+.+.+|.|..++...+..
T Consensus 3 ~Wt~eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~~~~~ 46 (48)
T PF00249_consen 3 PWTEEEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRSRYQN 46 (48)
T ss_dssp SS-HHHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 34788999999998887777 77777766669999988876654
No 87
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=21.20 E-value=5e+02 Score=22.79 Aligned_cols=60 Identities=18% Similarity=0.285 Sum_probs=40.5
Q ss_pred CCchHHHHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHH
Q psy16136 2 VVPPLIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSR-VIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQA 80 (332)
Q Consensus 2 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR-~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei 80 (332)
-+||...+++-|.|- |-+|+ ...-.+++ --||++||+. |-++++-++.+.-+.|+|-+.+
T Consensus 5 ~~p~~~~llqeLTkk--Nqeyv-----------h~vtkqli~~gksdeeik~------Il~e~ipqIleeQkkGitARkL 65 (226)
T COG4858 5 NKPPVADLLQELTKK--NQEYV-----------HEVTKQLIGDGKSDEEIKI------ILEEMIPQILEEQKKGITARKL 65 (226)
T ss_pred CCCchHHHHHHHHHH--hHHHH-----------HHHHHHHHhcCCCHHHHHH------HHHHHHHHHHHhhhccchHHHH
Confidence 468888888888763 45555 23344444 4789999974 5566777777777888876644
No 88
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=20.82 E-value=1.9e+02 Score=26.79 Aligned_cols=50 Identities=16% Similarity=0.023 Sum_probs=41.7
Q ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCch-hhhhHHHHHHHHhhc
Q psy16136 146 ITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSW-VDMHHLANKVVLSKL 199 (332)
Q Consensus 146 ~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~-~di~~a~~~~l~~~g 199 (332)
.||..++ |+++++..-...++...+-+.+..|..- .++-+++++.+.+.+
T Consensus 187 SSRN~YL----s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~ 237 (285)
T COG0414 187 SSRNVYL----SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAG 237 (285)
T ss_pred hhccccC----CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcC
Confidence 5666555 8999999999999999999999999755 899999999997543
Done!