BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16139
(466 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0VGK3|GLCTK_RAT Glycerate kinase OS=Rattus norvegicus GN=Glyctk PE=2 SV=1
Length = 523
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 191/309 (61%), Gaps = 19/309 (6%)
Query: 2 QEIKLIYEAAVSAVNGQNLIQANVHLEKN--KLIIRDQTVLIKNNVYLIGFGKAVLGMAV 59
++ + ++++AV AV ++Q + L+ + +L +RD+T ++ N+YL+GFGKAVLGMA
Sbjct: 36 EQARQLFDSAVGAVQPGPMLQRTLSLDPSGKQLKVRDRTFQLQENLYLVGFGKAVLGMAA 95
Query: 60 EIEAMFRPQRLKGILSVPFGSVG----------ILKPQFNKNSEIEIRECARNNLPDEAS 109
+ + ++G++SVP G +LKP +S I++ E A +NLPD +
Sbjct: 96 AADELLGQHLVQGVISVPKGIRAAVELAGKQEMLLKP----HSHIQVFEGAEDNLPDRDA 151
Query: 110 CQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKE 169
+ Q IQ + T DD++LVLISGGGSA L +P P++LE+K KLL GA I+E
Sbjct: 152 LRAAQAIQQLAERLTADDLLLVLISGGGSALLPAPIPPVTLEEKQTLTKLLAARGATIQE 211
Query: 170 LNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIV 229
LN +RK LS +KGG LA+ YPA +VSLI+SD++GDPL+ IASGPTV + D I+
Sbjct: 212 LNTIRKALSQLKGGGLAQAAYPAQVVSLILSDVIGDPLEVIASGPTVASTHSVQDCLHIL 271
Query: 230 IKYGLQNKVSKSVMTILSH--ETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQT 287
YGL+ + +SV T+LS PH +V N IIG+N AL A+ +AE LG+
Sbjct: 272 NHYGLRAALPRSVKTVLSRADSDPH-GPHTCGHVLNVIIGSNSLALAEAQRQAEVLGYHA 330
Query: 288 VILSSDIEG 296
++LS+ ++G
Sbjct: 331 MVLSTAMQG 339
>sp|Q8IVS8|GLCTK_HUMAN Glycerate kinase OS=Homo sapiens GN=GLYCTK PE=1 SV=1
Length = 523
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 191/309 (61%), Gaps = 19/309 (6%)
Query: 2 QEIKLIYEAAVSAVNGQNLIQANVHLEKN--KLIIRDQTVLIKNNVYLIGFGKAVLGMAV 59
++ + ++E+AV AV ++ + L+ +L +RD+ ++ N+YL+GFGKAVLGMA
Sbjct: 36 EQARQLFESAVGAVLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAA 95
Query: 60 EIEAMFRPQRLKGILSVPFG------SVG----ILKPQFNKNSEIEIRECARNNLPDEAS 109
E + ++G++SVP G G +LKP +S +++ E A +NLPD +
Sbjct: 96 AAEELLGQHLVQGVISVPKGIRAAMERAGKQEMLLKP----HSRVQVFEGAEDNLPDRDA 151
Query: 110 CQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKE 169
+ IQ + T DD++LVLISGGGSA L +P P++LE+K +LL GA I+E
Sbjct: 152 LRAALAIQQLAEGLTADDLLLVLISGGGSALLPAPIPPVTLEEKQTLTRLLAARGATIQE 211
Query: 170 LNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIV 229
LN +RK LS +KGG LA+ YPA +VSLI+SD+VGDP++ IASGPTV + D I+
Sbjct: 212 LNTIRKALSQLKGGGLAQAAYPAQVVSLILSDVVGDPVEVIASGPTVASSHNVQDCLHIL 271
Query: 230 IKYGLQNKVSKSVMTILSH--ETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQT 287
+YGL+ + +SV T+LS PH +V N IIG+N AL A+ +AE+LG+Q
Sbjct: 272 NRYGLRAALPRSVKTVLSRADSDPH-GPHTCGHVLNVIIGSNVLALAEAQRQAEALGYQA 330
Query: 288 VILSSDIEG 296
V+LS+ ++G
Sbjct: 331 VVLSAAMQG 339
>sp|Q2KJF7|GLCTK_BOVIN Glycerate kinase OS=Bos taurus GN=GLYCTK PE=2 SV=1
Length = 523
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 193/309 (62%), Gaps = 19/309 (6%)
Query: 2 QEIKLIYEAAVSAVNGQNLIQANVHLEKN--KLIIRDQTVLIKNNVYLIGFGKAVLGMAV 59
++ + ++E+ V AV L+Q + L+ + +L +RD++ ++ N+YL+GFGKAVLGMA
Sbjct: 36 EQARQLFESTVGAVLPGPLLQRALSLDPDSGELKVRDRSFQLRQNLYLVGFGKAVLGMAA 95
Query: 60 EIEAMFRPQRLKGILSVPFG------SVG----ILKPQFNKNSEIEIRECARNNLPDEAS 109
E + ++G++SVP G G +LKP +S I++ E A +NLPD +
Sbjct: 96 AAEELLGQHLVQGVISVPKGIRAAMEHAGKQEMLLKP----HSRIQVFEGAEDNLPDRDA 151
Query: 110 CQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKE 169
+ I+ + T DD++LVLISGGGSA L +P P++LE+K KLL GA I+E
Sbjct: 152 LRAALAIRQLAEGLTADDLLLVLISGGGSALLPAPIPPVTLEEKQTLTKLLAARGATIQE 211
Query: 170 LNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIV 229
LN +RK LS +KGG LA+ YPA +VSLI+SD+VGDP++ IASGPTV + D I+
Sbjct: 212 LNTIRKALSQLKGGGLAQAAYPAQVVSLILSDVVGDPVEVIASGPTVASIHSVQDCLYIL 271
Query: 230 IKYGLQNKVSKSVMTILSH--ETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQT 287
+YGL+ + +SV T+L+ PH +V N I+G+N AL A+ +AE+LG++
Sbjct: 272 NRYGLRTALPRSVKTVLARADSDPH-GPHTCGHVLNVILGSNALALAEAQKQAEALGYRA 330
Query: 288 VILSSDIEG 296
V+LS+ I+G
Sbjct: 331 VVLSTAIQG 339
>sp|Q8QZY2|GLCTK_MOUSE Glycerate kinase OS=Mus musculus GN=Glyctk PE=2 SV=1
Length = 523
Score = 214 bits (546), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 194/318 (61%), Gaps = 19/318 (5%)
Query: 2 QEIKLIYEAAVSAVNGQNLIQANVHLEKN--KLIIRDQTVLIKNNVYLIGFGKAVLGMAV 59
++ + ++++AV AV ++Q + L+ + +L +RD+T ++ N+YL+GFGKAVLGMA
Sbjct: 36 EQARQLFDSAVGAVQPGPMLQRTLSLDPSGRQLKVRDRTFQLRENLYLVGFGKAVLGMAA 95
Query: 60 EIEAMFRPQRLKGILSVPFG------SVG----ILKPQFNKNSEIEIRECARNNLPDEAS 109
E + ++G++SVP G G +LKP +S +++ E A +NLPD +
Sbjct: 96 AAEELLAQHLVQGVISVPKGIRAAMEHAGKKEMLLKP----HSRVQVFEGAEDNLPDRDA 151
Query: 110 CQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKE 169
+ IQ + T DD++LVLISGGGSA L +P P++LE+K KLL GA I+E
Sbjct: 152 LRAALTIQQLAEGLTADDLLLVLISGGGSALLPAPIPPVTLEEKQMLTKLLAARGATIQE 211
Query: 170 LNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIV 229
LN +RK LS +KGG LA+ YPA ++SLI+SD++GDPL+ IASGPTV + D I+
Sbjct: 212 LNTIRKALSQLKGGGLAQAAYPAQVISLILSDVIGDPLEVIASGPTVASAHSVQDCLHIL 271
Query: 230 IKYGLQNKVSKSVMTILSH--ETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQT 287
YGL+ + +SV T+LS PH +V N IIG+N AL A+ +AE LG+
Sbjct: 272 NHYGLRAALPRSVKTVLSRADSDPH-GPHTCGHVLNVIIGSNSLALAEAQRQAEVLGYHA 330
Query: 288 VILSSDIEGLGDDICRGY 305
++LS+ ++G + R Y
Sbjct: 331 MVLSTAMQGDVKRVARFY 348
>sp|Q08BL7|GLCTK_DANRE Glycerate kinase OS=Danio rerio GN=glyctk PE=2 SV=1
Length = 502
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 182/314 (57%), Gaps = 13/314 (4%)
Query: 5 KLIYEAAVSAVNGQNLIQANVHLEKNKLIIRDQTVLIKNNVYLIGFGKAVLGMAVEIEAM 64
+ ++ AAV V+ +++ + +KL + Q+ + NN+YL+GFGKAVLGMA E E +
Sbjct: 9 RAVFSAAVEGVHPDMVVRRGLERHGDKLHVGGQSFTLTNNLYLVGFGKAVLGMAAEAERI 68
Query: 65 FRPQRLKGILSVPFG------SVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQN 118
+KG++SVP G S G K NS I + E A++NLPD + ++ + I++
Sbjct: 69 VGDHLIKGVVSVPHGIQNTLRSHGKEKMLLESNSRITVMEGAKHNLPDTDAQKSAECIRD 128
Query: 119 FVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLS 178
TE D++LVLISGGGSA L +P P+SL++K + L +GA I+ELN VR+ LS
Sbjct: 129 LASSLTEKDLLLVLISGGGSALLPAPAPPMSLQEKQDVTRKLAAAGATIQELNTVRRALS 188
Query: 179 DVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQNKV 238
+KGG LA+ PA +V+LI+SD++GDPL IASGPTV ++ + I+ Y L + +
Sbjct: 189 LLKGGGLAQCASPAKVVALILSDVIGDPLDLIASGPTVRSDSSPEEVWAILDNYKLSDSL 248
Query: 239 SKSVMTILSHETPHQDT-------KYFENVHNHIIGNNRAALLGAKWKAESLGFQTVILS 291
SV +LS Q + + +NV N +IG+N AL A KA LG + VILS
Sbjct: 249 PSSVKEVLSKSISGQGSGVKNQPQEVKDNVLNVVIGSNTIALECASRKASELGLRPVILS 308
Query: 292 SDIEGLGDDICRGY 305
+ G + R Y
Sbjct: 309 PGVCGDVRSVARLY 322
>sp|Q9BE01|GLCTK_MACFA Glycerate kinase OS=Macaca fascicularis GN=GLYCTK PE=2 SV=1
Length = 396
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 141/216 (65%), Gaps = 7/216 (3%)
Query: 83 ILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLS 142
+LKP +S +++ E A +NLPD + + I+ + T DD++LVLISGGGSA L
Sbjct: 2 LLKP----HSRVQVFEGAEDNLPDRDALRAALAIRQLAEGLTADDLLLVLISGGGSALLP 57
Query: 143 SPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDI 202
+P P++LE+K +LL GA I+ELN +RK LS +KGG LA+ YPA +VSLI+SD+
Sbjct: 58 APIPPVTLEEKQTLTRLLAARGATIQELNTIRKALSQLKGGGLAQAAYPAQVVSLILSDV 117
Query: 203 VGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQNKVSKSVMTILSH--ETPHQDTKYFEN 260
VGDP++ IASGPTV + D I+ +YGL+ + +SV T+LS PH + +
Sbjct: 118 VGDPVEVIASGPTVASSHSVQDCLHILNRYGLRAALPRSVKTVLSRADSDPH-GPRTCGH 176
Query: 261 VHNHIIGNNRAALLGAKWKAESLGFQTVILSSDIEG 296
V N IIG+N AL A+ +AE+LG+Q V+LS+ ++G
Sbjct: 177 VLNVIIGSNVLALAEAQRQAEALGYQAVVLSAAMQG 212
>sp|Q9VQC4|GLCTK_DROME Glycerate kinase OS=Drosophila melanogaster GN=Glyctk PE=2 SV=1
Length = 487
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 157/278 (56%), Gaps = 9/278 (3%)
Query: 44 NVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNK--NSEIEIRECAR 101
+++GFGKAVLGMA +++ G+LSVP V LK QF + + + E A
Sbjct: 61 TCHIVGFGKAVLGMANKVQQDLGATSAGGVLSVP---VNTLK-QFQQPVAPGLVVHEGAA 116
Query: 102 NNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLV 161
NNLPDE + + + I+ + T D++ V ISGGGSA L P+SPL+LEDK L+
Sbjct: 117 NNLPDENALKAAREIKQLAEKMTAQDILFVFISGGGSALLPLPRSPLTLEDKRSIADKLM 176
Query: 162 QSGANIKELNKVRKKLSDVKGGQLAEIVYPAT-LVSLIISDIVGDPLQDIASGPTVLNED 220
+ GA+I+E+N VR SD+KGG+LA + A LV+ ++SDI+GDPL+ IA GPT+ E
Sbjct: 177 KRGASIQEINAVRIACSDIKGGRLARLAGQAGLLVTFVLSDIIGDPLELIACGPTIQPEA 236
Query: 221 LWSDARDIVIKYGLQNKVSKSVMTILSHETPHQDTKYFENVHNHIIGNNRAALLGAKWKA 280
S + DI+ K+ + ++S + + ++T E+ ++G+N A A +A
Sbjct: 237 AASPS-DILKKHHVWEELSPEIRRVFEQPEEQKNTSLPEH-KVFVVGSNVIATSTAAHEA 294
Query: 281 ESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQLRKQ 318
E LG+ +LS ++G + Y L+ I + ++
Sbjct: 295 ERLGYIPCVLSCAVQGDVAQVAGDYQRLLHGIQEAKQH 332
>sp|O58231|GCK_PYRHO Glycerate 2-kinase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=gck PE=1
SV=1
Length = 440
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 24/305 (7%)
Query: 4 IKLIYEAAVSAVNGQNLIQANVHLEKNKLIIRDQTVLIKNNVYLIGFGKAVLGMAVEIEA 63
++L+ EA + A + + V + +K+I++ + IK VY+I GKA MA IE
Sbjct: 11 LRLVGEA-IKAADPYRAVLNAVKVSDDKIIVQGKEFEIKGKVYVIALGKAACEMARAIED 69
Query: 64 MFRPQRLKGILSVPFGSVGILKPQFNKN-SEIEIRECARNNLPDEASCQNTQLIQNFVKH 122
IL V G V + K + K I++ E A + +PDE S + + +
Sbjct: 70 ---------ILDVEDG-VAVTKYGYGKELKRIKVIE-AGHPIPDEKSILGAKEALSILNR 118
Query: 123 CTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKG 182
E+D+V +LISGGGSA P+ +SLED T LL++SGA I E+N VRK +S VKG
Sbjct: 119 ARENDIVFILISGGGSALFELPEEGISLEDLKLTTDLLLKSGAKIHEINTVRKHISKVKG 178
Query: 183 GQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQNKVSKSV 242
G+LA+++ T + LIISD+VGD L+ IASGPTV + + DA+ I+ Y + KV +SV
Sbjct: 179 GKLAKMI-KGTGIVLIISDVVGDNLEAIASGPTVKDPTTFEDAKRILELYDIWEKVPESV 237
Query: 243 MTILSH-------ETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQTVILSSDIE 295
+ ET +D NVHN +I +N + +A+ LGF+ I+++ +E
Sbjct: 238 RLHIERGLRGEVEETLKED---LPNVHNFLIASNSISCEAIAREAQRLGFKAYIMTTTLE 294
Query: 296 GLGDD 300
G D
Sbjct: 295 GEAKD 299
>sp|Q09235|YQ42_CAEEL Uncharacterized protein C13B9.2 OS=Caenorhabditis elegans
GN=C13B9.2 PE=3 SV=3
Length = 458
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 168/317 (52%), Gaps = 16/317 (5%)
Query: 4 IKLIYEAAVSAVNGQNLIQANVHLEKNKLIIRDQTVLIKNN--VYLIGFGKAVLGMAVEI 61
++ +E + AV +++++ + L + L I D + N+ + +I FGKA + MA
Sbjct: 7 VRTAFEKCLLAVEPRSIVRNAISLNPSLLKIADYNYSLSNSTKIVVIAFGKASILMAKGA 66
Query: 62 EAMFRPQRL-KGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQ-LIQNF 119
+ L K I+ P GI N + EI AR+NLPDE S T+ +I
Sbjct: 67 RDQLKSSLLQKTIVIAPEQQKGIENELEN---DTEILYGARDNLPDEKSVFATRKVISEI 123
Query: 120 VKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSD 179
+E + L LISGGGSA L+SP +PL L +KL+TI+++ GA I+ELN +R+ LSD
Sbjct: 124 RDFDSESTIFLFLISGGGSALLTSPSAPLDLAEKLETIRIMQAHGATIQELNTIRQNLSD 183
Query: 180 VKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQN-KV 238
VKGG+L + ++LIISD++G+P++ IASGPTV+ +I L++ K+
Sbjct: 184 VKGGKLLREIKKGCSIALIISDVIGNPVELIASGPTVIPAH---QQDKFIISNILESLKI 240
Query: 239 SK-----SVMTILSHETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQTVILSSD 293
+K +V +L + Q + N II +N AL A S G+ + I++S
Sbjct: 241 NKLELPVNVKNVLENHEKEQLPENTSRFQNFIISSNNFALRAAAEYLTSSGYNSTIVTSS 300
Query: 294 IEGLGDDICRGYVDLVA 310
+ G +I + + +++
Sbjct: 301 LSGNAAEIGKKFAEIIT 317
>sp|Q44472|TTUD4_AGRVI Putative hydroxypyruvate reductase OS=Agrobacterium vitis GN=ttuD
PE=2 SV=1
Length = 438
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Query: 92 SEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLE 151
IEI E A + +PDE S + + I V+ DD+V+ LISGGGS+ L SP ++L
Sbjct: 97 GRIEILE-ASHPVPDEMSIKAAEKIFAAVQGLGPDDLVVALISGGGSSLLVSPTGKMTLT 155
Query: 152 DKLKTIKLLVQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIA 211
DK + L+ SGA I E+N VRK LS +KGG LA PA LV+LIISD+ GD +IA
Sbjct: 156 DKRAVNQALLASGATISEMNTVRKHLSAIKGGHLARAALPAKLVTLIISDVPGDDPSEIA 215
Query: 212 SGPTVLNEDLWSDARDIVIKYGLQNKVSKSVMTILSHETP 251
SGPTV + +DA I+ +YG+ S + + +ETP
Sbjct: 216 SGPTVADPTTLADAAAIIARYGIDLPESARAVLVQGNETP 255
>sp|P70788|TTUD3_AGRVI Putative hydroxypyruvate reductase OS=Agrobacterium vitis GN=ttuD
PE=2 SV=1
Length = 385
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 90/133 (67%)
Query: 100 ARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKL 159
A + +PD+ S + I V+ DD+V+ LISGGGS+ L SP + ++L DK K
Sbjct: 51 ASHPVPDDMSVEAAVRIIGAVRDLGPDDLVIALISGGGSSLLVSPAAGMTLADKKAVNKA 110
Query: 160 LVQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNE 219
L+ SGA I E+N VRK+LS +KGG+LA++ +PA +V+L+ISD+ GD +IASGPTV N+
Sbjct: 111 LLASGATISEMNAVRKQLSGIKGGRLAQLAHPARVVTLVISDVPGDDPSEIASGPTVAND 170
Query: 220 DLWSDARDIVIKY 232
DAR+IV +Y
Sbjct: 171 TTIDDAREIVSRY 183
>sp|Q6KZ25|GCK_PICTO Glycerate 2-kinase OS=Picrophilus torridus (strain ATCC 700027 /
DSM 9790 / JCM 10055 / NBRC 100828) GN=gck PE=1 SV=1
Length = 415
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 45 VYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNL 104
++LIGFGKA M I RP LK ++ I+ P K ++ R
Sbjct: 50 IFLIGFGKAAFKMYSGI----RPFILKDLVYAS-----IIVPDDEKTNDYNELRILRGTH 100
Query: 105 PDEASCQNTQLIQNF--VKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQ 162
P + I +K+ E+D+V+VLISGGGS+ P+ ++++D K ++
Sbjct: 101 PFTGDLSVSSSISMLSGLKNLNENDLVIVLISGGGSSLFEIPEDGINIDDIKNISKTMMD 160
Query: 163 SGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLW 222
G +I ELN VR LS VKGG+LA ++YPA ++S IISD+ D L IASGP +
Sbjct: 161 KGCDIYELNMVRSMLSKVKGGKLATMLYPARVISFIISDVKNDDLSIIASGPLTRIDYRI 220
Query: 223 SDARDIVIKYGLQNKVSKSVMTILSHETPHQDTKYFENVHNHIIGNNRAAL 273
D + + KY ++ K I D YF NV +II NR L
Sbjct: 221 EDLMETIKKYLGNDERIKMYRNI--------DDIYFNNVKQYIILKNRDFL 263
>sp|Q96YZ3|GCK_SULTO Glycerate 2-kinase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=gck PE=1 SV=1
Length = 399
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 28/214 (13%)
Query: 31 KLIIRDQTVLIKNNVY------LIGFGKAVLGMAVEIEAMF--RPQRLKGILSVPFGSVG 82
+++I+ +++ N + +I GKA MA F + + +KG++ +P GS
Sbjct: 21 RVVIKKNEIIVDGNHFPYTKPAIIAVGKASYKMA----KFFIDKLKDVKGLVILPKGSY- 75
Query: 83 ILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHCTED-DVVLVLISGGGSACL 141
I P+ +E+ E ++ + + T++I+ F+K+ ED D+++ L+SGG SA +
Sbjct: 76 ISLPK------VEVIESTHPDISELSFKAGTEVIK-FLKN--EDYDLLIFLLSGGASALM 126
Query: 142 SSPKSPLSLEDKLKTI-KLLVQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIIS 200
P + L+ I + LV+SG ++ E+N VRK LS +KGG+L E A +++LI+S
Sbjct: 127 EYSNVPYEI---LRDINEKLVKSGLSVNEINIVRKHLSLIKGGKLTEFS-KAPILTLIVS 182
Query: 201 DIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGL 234
D+ G L + SGPT+ + DA+ I+ K GL
Sbjct: 183 DVPGGDLSAVGSGPTLPDSSTVDDAKLILNKVGL 216
>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24
PE=1 SV=1
Length = 2617
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLVGE 465
E ++ + MGF+D +R+ALR A N+ N A LL E
Sbjct: 6 EQHMTTLLCMGFSDPATIRKALRLAKNDINEAVALLTNE 44
>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24
PE=1 SV=3
Length = 2620
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLVGE 465
E ++ + MGF+D +R+ALR A N+ N A LL E
Sbjct: 6 EQHMTTLLCMGFSDPATIRKALRLAKNDINEAVALLTNE 44
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,111,141
Number of Sequences: 539616
Number of extensions: 7073677
Number of successful extensions: 24721
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 24648
Number of HSP's gapped (non-prelim): 78
length of query: 466
length of database: 191,569,459
effective HSP length: 121
effective length of query: 345
effective length of database: 126,275,923
effective search space: 43565193435
effective search space used: 43565193435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)