Query psy16139
Match_columns 466
No_of_seqs 144 out of 605
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 21:50:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x3l_A Hypothetical protein PH 100.0 5.2E-96 2E-100 760.3 37.4 317 2-331 8-334 (440)
2 2b8n_A Glycerate kinase, putat 100.0 1.7E-92 5.8E-97 731.2 36.1 304 2-331 21-329 (429)
3 2jy5_A Ubiquilin-1; UBA, alter 93.9 0.013 4.4E-07 44.1 0.5 39 427-465 13-51 (52)
4 1wr1_B Ubiquitin-like protein 93.1 0.015 5.2E-07 44.9 -0.3 36 428-463 19-54 (58)
5 2bwb_A Ubiquitin-like protein 92.8 0.02 6.8E-07 42.2 0.0 36 427-462 8-43 (46)
6 2knz_A Ubiquilin-4; cytoplasm, 92.4 0.025 8.5E-07 42.6 0.1 34 429-462 14-47 (53)
7 1vej_A Riken cDNA 4931431F19; 91.7 0.032 1.1E-06 45.3 -0.0 37 427-463 30-66 (74)
8 1ify_A HHR23A, UV excision rep 90.6 0.083 2.8E-06 39.1 1.3 35 427-462 9-43 (49)
9 2dah_A Ubiquilin-3; UBA domain 89.8 0.036 1.2E-06 42.1 -1.3 36 428-463 11-46 (54)
10 2dna_A Unnamed protein product 88.2 0.072 2.5E-06 42.5 -0.6 35 428-462 21-55 (67)
11 1vg5_A RSGI RUH-014, rhomboid 84.3 0.21 7.3E-06 40.2 0.2 36 427-463 30-65 (73)
12 2cwb_A Chimera of immunoglobul 83.8 0.19 6.6E-06 43.4 -0.3 35 428-462 68-102 (108)
13 2g3q_A Protein YBL047C; endocy 82.6 0.25 8.6E-06 35.1 -0.0 34 427-461 5-38 (43)
14 1wji_A Tudor domain containing 80.1 0.3 1E-05 38.1 -0.4 35 427-462 10-44 (63)
15 1wiv_A UBP14, ubiquitin-specif 78.5 0.34 1.2E-05 38.8 -0.5 37 426-463 29-65 (73)
16 2dak_A Ubiquitin carboxyl-term 78.1 0.46 1.6E-05 36.7 0.1 35 427-462 10-44 (63)
17 1veg_A NEDD8 ultimate buster-1 77.9 0.57 2E-05 38.7 0.6 35 427-462 30-64 (83)
18 1z96_A DNA-damage, UBA-domain 74.3 0.61 2.1E-05 32.1 -0.1 29 429-458 7-35 (40)
19 4dvc_A Thiol:disulfide interch 70.9 0.6 2E-05 40.4 -1.0 13 365-377 27-39 (184)
20 2cp8_A NEXT to BRCA1 gene 1 pr 70.5 1.5 5.2E-05 33.5 1.3 24 429-452 12-35 (54)
21 2cpw_A CBL-interacting protein 69.5 0.78 2.7E-05 35.7 -0.5 35 427-462 20-55 (64)
22 2ekk_A UBA domain from E3 ubiq 68.5 0.56 1.9E-05 34.0 -1.4 35 426-462 9-43 (47)
23 3lfh_A Manxa, phosphotransfera 68.3 16 0.00055 32.2 7.7 98 44-170 5-114 (144)
24 1yzy_A Hypothetical protein HI 66.7 6.5 0.00022 40.3 5.5 30 300-329 330-359 (413)
25 3h93_A Thiol:disulfide interch 65.5 1.7 5.9E-05 38.3 0.8 13 366-378 32-44 (192)
26 3sho_A Transcriptional regulat 65.2 66 0.0023 27.9 11.2 94 42-189 39-132 (187)
27 3ipr_A PTS system, IIA compone 63.1 19 0.00065 31.7 7.2 99 44-170 3-118 (150)
28 3gyk_A 27KDA outer membrane pr 62.6 2.4 8.3E-05 36.6 1.2 13 366-378 29-41 (175)
29 1pdo_A Mannose permease; phosp 60.7 28 0.00097 29.8 7.7 99 44-170 3-113 (135)
30 3gx1_A LIN1832 protein; APC633 59.8 36 0.0012 29.4 8.2 97 44-170 6-115 (130)
31 3dqq_A Putative tRNA synthase; 59.4 12 0.00041 38.5 5.9 32 298-329 335-366 (421)
32 2dag_A Ubiquitin carboxyl-term 58.6 5.6 0.00019 31.7 2.6 33 426-459 9-42 (74)
33 2ooa_A E3 ubiquitin-protein li 58.4 1.9 6.6E-05 32.8 -0.1 34 428-462 13-46 (52)
34 2lbc_A Ubiquitin carboxyl-term 56.2 2.3 7.9E-05 36.6 -0.0 38 425-463 77-114 (126)
35 2juj_A E3 ubiquitin-protein li 56.1 3 0.0001 32.1 0.6 35 427-462 8-42 (56)
36 3l9s_A Thiol:disulfide interch 52.3 2.1 7.2E-05 38.7 -1.0 16 365-380 27-42 (191)
37 3feu_A Putative lipoprotein; a 52.2 2.1 7.2E-05 38.4 -1.0 14 365-378 28-41 (185)
38 3bed_A PTS system, IIA compone 50.2 53 0.0018 28.3 7.8 96 44-170 7-114 (142)
39 1oqy_A HHR23A, UV excision rep 49.9 4.9 0.00017 41.0 1.1 36 426-462 168-203 (368)
40 2d9s_A CBL E3 ubiquitin protei 49.4 2.9 0.0001 31.9 -0.4 36 426-462 9-44 (53)
41 3gha_A Disulfide bond formatio 48.7 2.6 8.9E-05 38.4 -1.0 12 366-377 36-47 (202)
42 3mtq_A Putative phosphoenolpyr 48.6 42 0.0015 30.1 7.0 97 44-170 23-130 (159)
43 3f4s_A Alpha-DSBA1, putative u 46.5 3 0.0001 39.1 -1.0 14 365-378 45-58 (226)
44 3gdw_A Sigma-54 interaction do 45.7 57 0.002 28.5 7.3 98 44-170 6-117 (139)
45 2fwh_A Thiol:disulfide interch 45.6 10 0.00034 31.4 2.2 53 406-458 79-133 (134)
46 2dkl_A Trinucleotide repeat co 44.8 4.2 0.00014 33.4 -0.2 32 427-459 22-53 (85)
47 1weh_A Conserved hypothetical 44.1 19 0.00064 32.5 4.0 47 93-145 3-49 (171)
48 3nav_A Tryptophan synthase alp 43.4 66 0.0023 31.2 8.0 23 149-171 32-54 (271)
49 1vek_A UBP14, ubiquitin-specif 41.9 11 0.00038 30.7 1.9 27 426-453 29-55 (84)
50 2kuc_A Putative disulphide-iso 41.7 25 0.00084 28.2 4.0 91 367-457 35-125 (130)
51 2w6a_A ARF GTPase-activating p 41.0 12 0.0004 29.3 1.7 34 146-179 8-41 (63)
52 2k5c_A Uncharacterized protein 41.0 5 0.00017 33.4 -0.3 27 364-390 47-78 (95)
53 3gn3_A Putative protein-disulf 40.9 4 0.00014 36.8 -1.0 12 366-377 21-32 (182)
54 2crn_A Ubash3A protein; compac 40.8 12 0.00041 29.0 1.8 26 427-453 10-35 (64)
55 3l9v_A Putative thiol-disulfid 40.5 4.1 0.00014 36.4 -1.0 15 366-380 21-35 (189)
56 1whc_A RSGI RUH-027, UBA/UBX 3 39.4 4 0.00014 31.6 -1.1 32 427-459 10-42 (64)
57 1v58_A Thiol:disulfide interch 38.9 6.3 0.00021 36.8 -0.1 22 435-456 215-236 (241)
58 2kui_A PKNB, serine/threonine- 37.5 25 0.00085 33.7 3.9 94 123-235 59-167 (275)
59 2kkp_A Phage integrase; SAM-li 37.2 44 0.0015 26.0 4.7 37 143-179 48-84 (117)
60 2dai_A Ubadc1, ubiquitin assoc 35.3 5.3 0.00018 32.6 -1.0 34 425-459 28-61 (83)
61 2khv_A Phage integrase; soluti 34.7 25 0.00084 27.6 2.9 37 142-180 41-77 (106)
62 3k9o_A Ubiquitin-conjugating e 33.8 7.4 0.00025 36.0 -0.5 35 427-462 164-198 (201)
63 3gmf_A Protein-disulfide isome 33.6 6.2 0.00021 36.3 -1.0 52 407-458 126-202 (205)
64 2znm_A Thiol:disulfide interch 32.5 12 0.00041 32.7 0.7 14 366-379 29-42 (195)
65 1un2_A DSBA, thiol-disulfide i 31.5 7.1 0.00024 35.6 -1.0 14 365-378 119-132 (197)
66 1t3b_A Thiol:disulfide interch 30.9 8.3 0.00028 35.1 -0.7 34 347-380 70-107 (211)
67 3hz8_A Thiol:disulfide interch 30.6 7.4 0.00025 34.8 -1.0 14 365-378 30-43 (193)
68 2qv7_A Diacylglycerol kinase D 30.2 47 0.0016 32.3 4.6 52 271-329 42-93 (337)
69 1z6m_A Conserved hypothetical 29.5 7.9 0.00027 33.4 -1.0 13 366-378 34-46 (175)
70 4ae4_A Ubiquitin-associated pr 29.3 14 0.00049 31.9 0.6 32 430-462 80-111 (118)
71 2oo9_A E3 ubiquitin-protein li 28.9 17 0.00059 26.9 0.9 33 427-460 5-37 (46)
72 1m3s_A Hypothetical protein YC 28.8 1.4E+02 0.0047 25.8 7.0 50 121-189 75-124 (186)
73 3qy7_A Tyrosine-protein phosph 28.7 1.2E+02 0.0041 28.9 7.1 64 275-340 24-92 (262)
74 3hd5_A Thiol:disulfide interch 28.5 23 0.0008 31.0 1.9 14 365-378 31-44 (195)
75 1t35_A Hypothetical protein YV 28.3 42 0.0015 30.7 3.7 46 93-144 3-49 (191)
76 2bon_A Lipid kinase; DAG kinas 27.6 62 0.0021 31.5 4.9 52 271-329 44-95 (332)
77 3trj_A Phosphoheptose isomeras 27.3 3.4E+02 0.011 24.3 9.7 54 122-194 111-164 (201)
78 4f6o_A Metacaspase-1; rossmann 26.3 1.7E+02 0.0058 29.5 8.0 36 103-140 107-142 (350)
79 2pyq_A Uncharacterized protein 26.3 32 0.0011 30.0 2.2 34 415-451 50-83 (114)
80 1b4u_B LIGA, LIGB, protocatech 26.2 85 0.0029 30.6 5.6 44 101-144 156-200 (302)
81 3s40_A Diacylglycerol kinase; 26.2 59 0.002 31.2 4.4 51 271-329 26-76 (304)
82 3bci_A Disulfide bond protein 25.8 10 0.00035 33.2 -1.0 13 366-378 18-30 (186)
83 3vnd_A TSA, tryptophan synthas 24.8 64 0.0022 31.2 4.4 35 149-183 30-76 (267)
84 3qua_A Putative uncharacterize 23.7 67 0.0023 29.9 4.1 46 92-144 23-69 (199)
85 2kd1_A DNA integration/recombi 23.6 52 0.0018 25.7 2.9 37 143-179 46-82 (118)
86 1xwr_A Regulatory protein CII; 23.3 36 0.0012 28.5 1.9 73 274-384 24-96 (97)
87 2rem_A Disulfide oxidoreductas 22.5 13 0.00044 32.4 -1.0 13 366-378 32-44 (193)
88 2kj8_A Putative prophage CPS-5 22.0 90 0.0031 24.7 4.1 35 143-181 45-79 (118)
89 2y8u_A Chitin deacetylase; hyd 21.9 1.8E+02 0.0061 26.9 6.7 71 180-290 20-90 (230)
90 2q22_A Uncharacterized protein 21.8 81 0.0028 28.2 4.1 73 220-296 10-89 (139)
91 1mzh_A Deoxyribose-phosphate a 21.7 14 0.00048 34.5 -1.0 70 147-233 128-197 (225)
92 1wek_A Hypothetical protein TT 21.6 51 0.0017 31.0 2.9 46 93-144 39-84 (217)
93 2a33_A Hypothetical protein; s 21.3 1.2E+02 0.0042 28.3 5.5 47 92-144 14-61 (215)
94 1ydh_A AT5G11950; structural g 21.0 84 0.0029 29.5 4.3 47 92-144 10-57 (216)
95 3py9_A Protein kinase; pasta, 20.9 56 0.0019 31.7 3.1 95 123-235 58-167 (294)
96 3klj_A NAD(FAD)-dependent dehy 20.8 1.8E+02 0.0062 28.6 6.9 54 43-122 147-200 (385)
97 3bij_A Uncharacterized protein 20.5 94 0.0032 29.8 4.6 33 105-139 55-87 (285)
98 1dcf_A ETR1 protein; beta-alph 20.3 2.1E+02 0.0072 22.4 6.1 59 102-163 58-129 (136)
No 1
>1x3l_A Hypothetical protein PH0495; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.2e-96 Score=760.29 Aligned_cols=317 Identities=32% Similarity=0.460 Sum_probs=300.0
Q ss_pred hHHHHHHHHHHHccCchhHHHhhcccccceeeeecceeccC-CCEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCC
Q psy16139 2 QEIKLIYEAAVSAVNGQNLIQANVHLEKNKLIIRDQTVLIK-NNVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGS 80 (466)
Q Consensus 2 ~~a~~If~aal~AVdP~~~v~~al~~~~~~L~I~~~~~~l~-~~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~ 80 (466)
+++++||++||++++|++++++++...++.|+|+++.| +. +|+|||||||||++||++++++| + +.+|+||||||+
T Consensus 8 ~~l~~if~aav~a~~P~~~v~~~l~~~~~~L~v~~~~~-l~~gr~~vvg~GKAa~~MA~a~e~~~-~-~~~G~Vvt~~g~ 84 (440)
T 1x3l_A 8 EIGLRLVGEAIKAADPYRAVLNAVKVSDDKIIVQGKEF-EIKGKVYVIALGKAACEMARAIEDIL-D-VEDGVAVTKYGY 84 (440)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHEEECSSEEEETTEEE-ECCSCEEEEEESTTHHHHHHHHHHHS-C-CSEEEEEEETTC
T ss_pred HHHHHHHHHHHHhhCHHHHHHHhccccccccccccccc-cCCCCEEEEEEcHHHHHHHHHHHHHh-C-cCceEEEECCCC
Confidence 57899999999999999999999998888999999999 55 69999999999999999999999 4 788999999998
Q ss_pred ccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCccccccCCCCCCCHHHHHHHHHHH
Q psy16139 81 VGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLL 160 (466)
Q Consensus 81 ~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSALL~~P~~gITLeDk~~lt~~L 160 (466)
. .+.++|+|+|+ +||+||++|++|+++|++++++++++|+|||||||||||||++|.+||||+||+++|++|
T Consensus 85 ~-------~~~~~i~v~eA-~HPvPD~~s~~Aa~~il~~~~~l~~~Dlvl~LISGGGSALl~~P~~gitL~dk~~~~~~L 156 (440)
T 1x3l_A 85 G-------KELKRIKVIEA-GHPIPDEKSILGAKEALSILNRARENDIVFILISGGGSALFELPEEGISLEDLKLTTDLL 156 (440)
T ss_dssp C-------CCCSSSEEEEE-CSSSCCHHHHHHHHHHHHHHHHCCTTSEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHH
T ss_pred C-------CCCCCeEEEEC-CCCCCCHHHHHHHHHHHHHHhcCCCCCEEEEEecCcHHHhhhcCCCCCCHHHHHHHHHHH
Confidence 5 34578999997 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCChHHHHHHHHhhcccccchHhhhhcCCeEEEEEEecCCCCCCCccccCccccCCCCHHHHHHHHHHhCCCccchH
Q psy16139 161 VQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQNKVSK 240 (466)
Q Consensus 161 L~sGA~I~EINtVRKhLS~VKGGrLA~~a~pA~vvsLIlSDV~GDdL~~IASGPTvPD~sT~~DAl~IL~ky~L~~~lP~ 240 (466)
|+|||+|+|||+||||||+|||||||+++ |++|++|||||||||||++||||||+||+||++||++||+||+||+++|+
T Consensus 157 L~sGA~I~EiN~VRKhLS~iKGGrLA~~a-pA~vvtLiiSDV~GDdl~~IASGPTvpd~tt~~dA~~il~ry~l~~~lp~ 235 (440)
T 1x3l_A 157 LKSGAKIHEINTVRKHISKVKGGKLAKMI-KGTGIVLIISDVVGDNLEAIASGPTVKDPTTFEDAKRILELYDIWEKVPE 235 (440)
T ss_dssp HHTCCCHHHHHHHHHTTBSSTTTHHHHTC-SSEEEEEEECCSTTCCTTTGGGCTTSCCCCCHHHHHHHHHHTTCTTTSCH
T ss_pred HHcCCCHHHHHHHHHHHhhccchHHHHhC-CCcEEEEEEecCCCCChhheecCCcCCCCCCHHHHHHHHHHhCCcccCCH
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccC-----CCCCCCCCCCCeeEEEEecHHHHHHHHHHHHHhCCCcEEecCCCccccHHHHHHHHHHHHHHHHHh
Q psy16139 241 SVMTILSHE-----TPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQL 315 (466)
Q Consensus 241 sV~~~L~~~-----~~~~~~~~f~~v~n~IIgsN~~Al~AA~~~A~~lGy~~~ILss~l~GEArevar~laaia~~i~~~ 315 (466)
+|+++|+.+ ...+. +.|.+++|+|||||..+++||+++|+++||++++++++++|||||+|++|++|+++++..
T Consensus 236 ~v~~~L~~~~~g~~~etpk-~~~~~~~~~iIasn~~al~aAa~~A~~~G~~~~il~~~l~Geareva~~~a~ia~~~~~~ 314 (440)
T 1x3l_A 236 SVRLHIERGLRGEVEETLK-EDLPNVHNFLIASNSISCEAIAREAQRLGFKAYIMTTTLEGEAKDAGLFIGSIVQEIAER 314 (440)
T ss_dssp HHHHHHHHHHHTSSCCSCC-SCCTTEEEEEEECHHHHHHHHHHHHHHTTCEEEEEEEEECSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccccCCCC-ccccCceEEEECCHHHHHHHHHHHHHHcCCcEEEecCccceeHHHHHHHHHHHHHHHHhc
Confidence 999999864 12222 378999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCc----EEEecCcccccc
Q psy16139 316 RKQR----TIQVGKDKNNIK 331 (466)
Q Consensus 316 ~~~~----~il~gge~~~~~ 331 (466)
.+|+ +||+||||||--
T Consensus 315 ~~p~~~P~~llsGGEtTVtv 334 (440)
T 1x3l_A 315 GRPFEPPVVLVFGGETTVTI 334 (440)
T ss_dssp CCSSCSSEEEEEEECCBCCC
T ss_pred CCCCCCCeEEEEcCCcEEEe
Confidence 8765 999999999854
No 2
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, center for structural genomics, JCSG; 2.53A {Thermotoga maritima} SCOP: c.118.1.1
Probab=100.00 E-value=1.7e-92 Score=731.16 Aligned_cols=304 Identities=31% Similarity=0.448 Sum_probs=284.2
Q ss_pred hHHHHHHHHHHHccCchhHHHhhcccccceeeeecceeccCCCEEEEEechhHHHHHHH-HHHHhCCCCcceEEEecCCC
Q psy16139 2 QEIKLIYEAAVSAVNGQNLIQANVHLEKNKLIIRDQTVLIKNNVYLIGFGKAVLGMAVE-IEAMFRPQRLKGILSVPFGS 80 (466)
Q Consensus 2 ~~a~~If~aal~AVdP~~~v~~al~~~~~~L~I~~~~~~l~~~i~VVg~GKAA~~MA~a-ae~~LG~~i~~GiVvtp~g~ 80 (466)
+.+++||++||++++|++++++++...+ .+|+|||||||||++||++ ++++|+ ++.+|+||||||+
T Consensus 21 ~~l~~if~aav~a~~P~~~v~~~l~~~~------------~gr~~vvg~GKAa~~MA~aa~e~~~~-~~~~GlVvt~~g~ 87 (429)
T 2b8n_A 21 KLAIEIVKKSIEAVFPDRAVKETLPKLN------------LDRVILVAVGKAAWRMAKAAYEVLGK-KIRKGVVVTKYGH 87 (429)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHTTHHHHC------------CCSEEEEEESTTHHHHHHHHHHHHGG-GEEEEEEEEETTC
T ss_pred HHHHHHHHHHHHhhCHHHHHHHhcCcCC------------CCCEEEEEecHHHHHHHHHHHHHhhc-cCccEEEEECCCc
Confidence 4689999999999999999999985422 4699999999999999999 999994 5788999999998
Q ss_pred ccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCccccccCCCCCCCHHHHHHHHHHH
Q psy16139 81 VGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLL 160 (466)
Q Consensus 81 ~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSALL~~P~~gITLeDk~~lt~~L 160 (466)
.. ++.++|+|+|+ +||+||++|++|+++|++++++++++|+|||||||||||||++|.+||||+||+++|++|
T Consensus 88 ~~------~~~~~i~v~eA-~HPvPD~~s~~Aa~~il~l~~~l~~~Dlvl~LISGGGSALl~~P~~gitL~dk~~i~~~L 160 (429)
T 2b8n_A 88 SE------GPIDDFEIYEA-GHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSAL 160 (429)
T ss_dssp CC------SCCTTCEEEEE-CSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHH
T ss_pred CC------CCCCceEEEEC-CCCCCCHHHHHHHHHHHHHHhcCCCCCEEEEEecCcHHHHhhcCCCCCCHHHHHHHHHHH
Confidence 52 22578999997 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCChHHHHHHHHhhcccccchHhhhhcCCeEEEEEEecCCCCCCCccccCccccCCCCHHHHHHHHHHhCCCccchH
Q psy16139 161 VQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQNKVSK 240 (466)
Q Consensus 161 L~sGA~I~EINtVRKhLS~VKGGrLA~~a~pA~vvsLIlSDV~GDdL~~IASGPTvPD~sT~~DAl~IL~ky~L~~~lP~ 240 (466)
|+|||+|+|||+||||||+|||||||++++|++|++|||||||||||++||||||+||+||++||++||+||+| .+|+
T Consensus 161 L~sGA~I~EiN~VRKhLS~iKGGrLA~~a~pA~vvtLiiSDV~GDdl~~IASGPTvpd~tT~~dA~~il~ry~l--~lp~ 238 (429)
T 2b8n_A 161 LKSGASIEEINTVRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWPDSSTSEDALKVLEKYGI--ETSE 238 (429)
T ss_dssp HHTTCCHHHHHHHHHTTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSCCCCCHHHHHHHHHHTTC--CCCH
T ss_pred HHcCCCHHHHHHHHHHHhhcccHHHHHhcCCCeEEEEEEecCCCCChhheecCCcCCCCCCHHHHHHHHHHhCC--CCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 4999
Q ss_pred HHHHHHccCCCCCCCCCCCCeeEEEEecHHHHHHHHHHHHHhCCCcEEecCCCccccHHHHHHHHHHHHHHHHHhcCCc-
Q psy16139 241 SVMTILSHETPHQDTKYFENVHNHIIGNNRAALLGAKWKAESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQLRKQR- 319 (466)
Q Consensus 241 sV~~~L~~~~~~~~~~~f~~v~n~IIgsN~~Al~AA~~~A~~lGy~~~ILss~l~GEArevar~laaia~~i~~~~~~~- 319 (466)
+|+++|+..+ ++.|.+++|+|||||..+++||+++|+++||++++++++++||||++|++|++|+++++...+|+
T Consensus 239 ~v~~~L~~et----pk~~~~~~~~iIasn~~al~AAa~~A~~~G~~~~il~~~l~Gearevg~~~a~ia~~~~~~~~p~~ 314 (429)
T 2b8n_A 239 SVKRAILQET----PKHLSNVEIHLIGNVQKVCDEAKSLAKEKGFNAEIITTSLDCEAREAGRFIASIMKEVKFKDRPLK 314 (429)
T ss_dssp HHHHHHTSCC----CSCCSSEEEEEEECHHHHHHHHHHHHHHTTCEEEEEEEEECSBHHHHHHHHHHHHHHHHHHCCSSC
T ss_pred HHHHHHhhhh----hhccccceEEEECCHHHHHHHHHHHHHHcCCeEEEecCCCceeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999998322 23789999999999999999999999999999999999999999999999999999999887665
Q ss_pred ---EEEecCcccccc
Q psy16139 320 ---TIQVGKDKNNIK 331 (466)
Q Consensus 320 ---~il~gge~~~~~ 331 (466)
+||+||||||--
T Consensus 315 ~P~~llsGGEtTVtv 329 (429)
T 2b8n_A 315 KPAALIFGGETVVHV 329 (429)
T ss_dssp SSEEEEEEECCBCCC
T ss_pred CCeEEEEcCCcEEEe
Confidence 999999999854
No 3
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=93.88 E-value=0.013 Score=44.10 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=30.8
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeeccC
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLVGE 465 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (466)
+.-+-++..|||+|+..+++||++.-+..+-|.=+|..-
T Consensus 13 ~~~l~~L~~MGF~~~~~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 13 QQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 345678899999999999999999988777665555443
No 4
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=93.06 E-value=0.015 Score=44.92 Aligned_cols=36 Identities=28% Similarity=0.330 Sum_probs=29.8
Q ss_pred hhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeec
Q psy16139 428 NYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLV 463 (466)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
.-+-++..|||+|+..+++||+.+-+..+.|+=+|.
T Consensus 19 ~qi~~L~~MGF~d~~~~~~AL~~~~gnve~Ave~L~ 54 (58)
T 1wr1_B 19 HQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSLL 54 (58)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 346678899999999999999999988887765554
No 5
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=92.79 E-value=0.02 Score=42.16 Aligned_cols=36 Identities=31% Similarity=0.347 Sum_probs=29.0
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
+.-+-++..|||+|+..+++||+.+-+.++.|.=+|
T Consensus 8 ~~~i~~L~~MGF~d~~~~~~AL~~~~gnv~~Ave~L 43 (46)
T 2bwb_A 8 EHQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSL 43 (46)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHH
Confidence 344567889999999999999999988887765443
No 6
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=92.36 E-value=0.025 Score=42.62 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=27.7
Q ss_pred hhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 429 YLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
-+-++..|||+|++.+++||++.-+..+.|.=+|
T Consensus 14 ~l~~L~~MGF~~~~~~~~AL~~t~gnve~Ave~L 47 (53)
T 2knz_A 14 QLEQLNSMGFINREANLQALIATGGDINAAIERL 47 (53)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4667889999999999999999988776665433
No 7
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=91.70 E-value=0.032 Score=45.25 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=30.4
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeec
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLV 463 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
+.-+-++..|||+|+..+++||+.+-+.++.|.=+|.
T Consensus 30 e~qi~qL~eMGF~dr~~~~~AL~~t~Gnve~Ave~L~ 66 (74)
T 1vej_A 30 QQELEELKALGFANRDANLQALVATDGDIHAAIEMLL 66 (74)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 3346788999999999999999999888887765554
No 8
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=90.56 E-value=0.083 Score=39.11 Aligned_cols=35 Identities=37% Similarity=0.575 Sum_probs=28.8
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
+.-+-++..||| +++++++|||+.-|.++.|+=+|
T Consensus 9 ~~~i~~L~~MGF-~~~~a~~AL~~~~~n~e~A~e~L 43 (49)
T 1ify_A 9 ETMLTEIMSMGY-ERERVVAALRASYNNPHRAVEYL 43 (49)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHTTTSCSHHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHhCCCHHHHHHHH
Confidence 344677889999 89999999999999888876544
No 9
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=89.76 E-value=0.036 Score=42.09 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=28.2
Q ss_pred hhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeec
Q psy16139 428 NYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLV 463 (466)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
.-+-++..|||+|+..+++||++.-+..+.|.=+|.
T Consensus 11 ~~l~~L~~MGF~d~~~n~~AL~~~~Gdv~~Ave~L~ 46 (54)
T 2dah_A 11 VQLEQLRSMGFLNREANLQALIATGGDVDAAVEKLR 46 (54)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHH
Confidence 346788999999999999999998777666654443
No 10
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=88.25 E-value=0.072 Score=42.47 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=28.7
Q ss_pred hhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 428 NYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
.-|-.+..|||+|+...++||+.+-+.++.|.=+|
T Consensus 21 ~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L 55 (67)
T 2dna_A 21 KEMECLQAMGFVNYNANLQALIATDGDTNAAIYKL 55 (67)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHH
Confidence 35677899999999999999999988877665443
No 11
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=84.29 E-value=0.21 Score=40.22 Aligned_cols=36 Identities=33% Similarity=0.479 Sum_probs=29.2
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeec
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLV 463 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
+.-+-++..||| ++.++++|||+.-+.++.|+=+|.
T Consensus 30 ee~I~~L~eMGF-~r~~a~~AL~~~~~nve~Ave~Ll 65 (73)
T 1vg5_A 30 EEQIQKLVAMGF-DRTQVEVALAAADDDLTVAVEILM 65 (73)
T ss_dssp HHHHHHHHTTTC-CHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHhCCCHHHHHHHHH
Confidence 445678899999 789999999999988877765554
No 12
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=83.79 E-value=0.19 Score=43.39 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=28.2
Q ss_pred hhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 428 NYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
.-|-++..|||+|+...++||+.+-+..+-|-=+|
T Consensus 68 ~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L 102 (108)
T 2cwb_A 68 PQLQQLRDMGIQDDELSLRALQATGGDIQAALELI 102 (108)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 35678899999999999999999888776654333
No 13
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=82.55 E-value=0.25 Score=35.14 Aligned_cols=34 Identities=29% Similarity=0.349 Sum_probs=25.5
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLL 461 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (466)
|.-+-++..|||. ++++++||+..-+.++-|.-+
T Consensus 5 e~~i~~L~~MGF~-~~~a~~AL~~~~~n~e~A~~~ 38 (43)
T 2g3q_A 5 SLAVEELSGMGFT-EEEAHNALEKCNWDLEAATNF 38 (43)
T ss_dssp HHHHHHHHTTTSC-HHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHcCCC-HHHHHHHHHHhCcCHHHHHHH
Confidence 3446788999995 789999999987766655433
No 14
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=80.15 E-value=0.3 Score=38.11 Aligned_cols=35 Identities=34% Similarity=0.455 Sum_probs=27.3
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
+.-+-++..||| +++++++||+..-|..+.|+-+|
T Consensus 10 ~~~I~~L~~MGF-~~~~a~~AL~~~~~nve~A~e~L 44 (63)
T 1wji_A 10 EKALKHITEMGF-SKEASRQALMDNGNNLEAALNVL 44 (63)
T ss_dssp HHHHHHHHTTTC-CHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHhCCCHHHHHHHH
Confidence 456778899999 67889999999888776665443
No 15
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=78.49 E-value=0.34 Score=38.77 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=29.1
Q ss_pred hhhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeec
Q psy16139 426 AENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLV 463 (466)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
-+..+-++..||| +++.+++|||..-|..+.|+=+|.
T Consensus 29 ~~~~v~~L~~MGF-~~~~a~~AL~~t~~nve~Ave~L~ 65 (73)
T 1wiv_A 29 DQSSVDTLLSFGF-AEDVARKALKASGGDIEKATDWVF 65 (73)
T ss_dssp CHHHHHHHHHHTC-CHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHcCC-CHHHHHHHHHHhCCCHHHHHHHHH
Confidence 3556788999999 689999999998887766664443
No 16
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.12 E-value=0.46 Score=36.67 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=27.6
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
+..+-++..|||+ ++++++|||..-|.++.|+-+|
T Consensus 10 ~~~v~~L~~MGF~-~~~a~~AL~~t~~nve~A~e~L 44 (63)
T 2dak_A 10 EDCVTTIVSMGFS-RDQALKALRATNNSLERAVDWI 44 (63)
T ss_dssp HHHHHHHHHHTCC-HHHHHHHHHHTTSCSHHHHHHH
T ss_pred HHHHHHHHHcCCC-HHHHHHHHHHcCCCHHHHHHHH
Confidence 4556788899995 8999999999988777665444
No 17
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=77.90 E-value=0.57 Score=38.68 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=28.7
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
+.-+.++..||| ++..+++|||+..+.++.|+=+|
T Consensus 30 ee~I~~Lv~MGF-~~~~A~~AL~~t~gdve~A~e~L 64 (83)
T 1veg_A 30 QESINQLVYMGF-DTVVAEAALRVFGGNVQLAAQTL 64 (83)
T ss_dssp HHHHHHHHHHSC-CHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHcCCCHHHHHHHH
Confidence 566788999999 78999999999988877665444
No 18
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=74.31 E-value=0.61 Score=32.13 Aligned_cols=29 Identities=28% Similarity=0.389 Sum_probs=22.3
Q ss_pred hhhhhhhcCcCChHHHHHHHHHhhCCCCce
Q psy16139 429 YLVKIKKMGFTDENEVRRALRKAANEPNHA 458 (466)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
-+-++..|||+ ++++++||+..-+.++.|
T Consensus 7 ~i~~L~~mGf~-~~~a~~AL~~~~~n~e~A 35 (40)
T 1z96_A 7 KIAQLVSMGFD-PLEAAQALDAANGDLDVA 35 (40)
T ss_dssp HHHHHHHTTCC-HHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHcCCC-HHHHHHHHHHcCCCHHHH
Confidence 45678899995 788999999986655544
No 19
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=70.88 E-value=0.6 Score=40.36 Aligned_cols=13 Identities=46% Similarity=1.150 Sum_probs=11.2
Q ss_pred cccccCCCcccce
Q psy16139 365 KSFDYKSPHCNQF 377 (466)
Q Consensus 365 ~~~~~~~~~~~~~ 377 (466)
.-|||.||||.+|
T Consensus 27 Ef~dy~Cp~C~~~ 39 (184)
T 4dvc_A 27 EFFSFYCPHCNTF 39 (184)
T ss_dssp EEECTTCHHHHHH
T ss_pred EEECCCCHhHHHH
Confidence 3689999999877
No 20
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=70.53 E-value=1.5 Score=33.52 Aligned_cols=24 Identities=29% Similarity=0.452 Sum_probs=20.3
Q ss_pred hhhhhhhcCcCChHHHHHHHHHhh
Q psy16139 429 YLVKIKKMGFTDENEVRRALRKAA 452 (466)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~ 452 (466)
-|..+..|||+|+..-.++|++.-
T Consensus 12 ~L~~L~eMGF~D~~~N~~aL~~~~ 35 (54)
T 2cp8_A 12 LMAHLFEMGFCDRQLNLRLLKKHN 35 (54)
T ss_dssp HHHHHHHHTCCCHHHHHHHHTTTT
T ss_pred HHHHHHHcCCCcHHHHHHHHHHcC
Confidence 356788999999999999998754
No 21
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=69.48 E-value=0.78 Score=35.71 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=26.4
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhC-CCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAAN-EPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 462 (466)
+..+-++..||| +++.+++|||..-| .++.|+=+|
T Consensus 20 e~~i~~L~~MGF-~~~~a~~AL~~t~~~nve~A~ewL 55 (64)
T 2cpw_A 20 GSALDVLLSMGF-PRARAQKALASTGGRSVQTACDWL 55 (64)
T ss_dssp CCHHHHHHHHTC-CHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHcCCCCHHHHHHHH
Confidence 455778889999 56999999999887 666555443
No 22
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.47 E-value=0.56 Score=34.02 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=25.3
Q ss_pred hhhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 426 AENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
-+.-+-++..|||+. +.+++||+.. +.++.|+=+|
T Consensus 9 ~~~~v~~L~~MGF~~-~~a~~AL~~~-~n~e~A~~~L 43 (47)
T 2ekk_A 9 NQQQLQQLMDMGFTR-EHAMEALLNT-STMEQATEYL 43 (47)
T ss_dssp CHHHHHHHHHHHCCH-HHHHHHHHHS-CSHHHHHHHH
T ss_pred CHHHHHHHHHcCCCH-HHHHHHHHHc-CCHHHHHHHH
Confidence 355677888999976 8899999987 5555554333
No 23
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=68.26 E-value=16 Score=32.16 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=62.0
Q ss_pred CEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcC
Q psy16139 44 NVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHC 123 (466)
Q Consensus 44 ~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l 123 (466)
.++|++=|+-|.+|+..++.++|+. .++..+..- ||+.--.-.+++.+.++++
T Consensus 5 giii~sHG~~A~gl~~~~~~i~G~~-----------------------~~v~av~~~----~~~~~~~~~~~i~~~i~~~ 57 (144)
T 3lfh_A 5 FVLIITHGDFGKGLLSGAEVIIGKQ-----------------------ENVHTVGLN----LGDNIEVVRKEVEKIIKEK 57 (144)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCCC-----------------------SSEEEEEEC----TTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEeCcHHHHHHHHHHHHHcCCC-----------------------CcEEEEEcc----CCCCHHHHHHHHHHHHHHh
Confidence 5889999999999999999999863 134555431 4444445677888888888
Q ss_pred -CCCcEEEEEE--eCCcc-----ccccCC----CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 124 -TEDDVVLVLI--SGGGS-----ACLSSP----KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 124 -~~~DlVLvLI--SGGGS-----ALL~~P----~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
..+|=||+|. -||.- .+..-| +.|++|.=+.++... +.+.+++|+
T Consensus 58 ~~~~~gvliLtDl~GGSp~n~a~~l~~~~~v~vItGvNLpMlle~~~~--r~~~~l~el 114 (144)
T 3lfh_A 58 LQEDKEIIIVVDLFGGSPFNIALSMMKEYDVKVITGINMPMLVELLTS--INVYDTTEL 114 (144)
T ss_dssp HTTTCEEEEEESSSSSHHHHHHHHHHHHHCCEEEESCCHHHHHHHHHS--TTTSCHHHH
T ss_pred hCCCCcEEEEEeCCCCCHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHh--ccCCCHHHH
Confidence 7778777774 45541 121111 245666655554322 334466654
No 24
>1yzy_A Hypothetical protein HI1011; putative tRNA synthase, structural genomics, PSI, protein structure initiative; 2.10A {Haemophilus influenzae} SCOP: c.146.1.1
Probab=66.75 E-value=6.5 Score=40.29 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEecCcccc
Q psy16139 300 DICRGYVDLVAWIDQLRKQRTIQVGKDKNN 329 (466)
Q Consensus 300 evar~laaia~~i~~~~~~~~il~gge~~~ 329 (466)
.+++.++.+++.+.+.....+|++||||+.
T Consensus 330 ~I~~~la~i~~~l~~~~~~~livaGGdTs~ 359 (413)
T 1yzy_A 330 AIENTFAKLAAKLKQYGVTNFITAGGETSS 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEESHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCeEEEecCHHHH
Confidence 478889999998875667779999999985
No 25
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=65.47 E-value=1.7 Score=38.32 Aligned_cols=13 Identities=46% Similarity=0.876 Sum_probs=11.0
Q ss_pred ccccCCCccccee
Q psy16139 366 SFDYKSPHCNQFL 378 (466)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (466)
-|||.||||.+|-
T Consensus 32 f~d~~Cp~C~~~~ 44 (192)
T 3h93_A 32 LFWYGCPHCYAFE 44 (192)
T ss_dssp EECTTCHHHHHHH
T ss_pred EECCCChhHHHhh
Confidence 5899999998874
No 26
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=65.23 E-value=66 Score=27.87 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=58.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHh
Q psy16139 42 KNNVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVK 121 (466)
Q Consensus 42 ~~~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~ 121 (466)
.++||++|.|. +...|..+...+.. + | .++.++.+ |.. .....+.
T Consensus 39 a~~I~i~G~G~-S~~~a~~~~~~l~~-~---------g------------~~~~~~~~------~~~------~~~~~~~ 83 (187)
T 3sho_A 39 ADHVIVVGMGF-SAAVAVFLGHGLNS-L---------G------------IRTTVLTE------GGS------TLTITLA 83 (187)
T ss_dssp CSEEEEECCGG-GHHHHHHHHHHHHH-T---------T------------CCEEEECC------CTH------HHHHHHH
T ss_pred CCEEEEEecCc-hHHHHHHHHHHHHh-c---------C------------CCEEEecC------Cch------hHHHHHh
Confidence 35999999997 55677777766631 1 1 12333331 111 1233456
Q ss_pred cCCCCcEEEEEEeCCccccccCCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcccccchHhhhh
Q psy16139 122 HCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKGGQLAEIV 189 (466)
Q Consensus 122 ~l~~~DlVLvLISGGGSALL~~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~VKGGrLA~~a 189 (466)
.++++|++|+ ||-.|.. .+..+..+.+-+.|++|- -+..-.++.|++.+
T Consensus 84 ~~~~~d~~i~-iS~sG~t-----------~~~~~~~~~ak~~g~~vi-------~IT~~~~s~l~~~a 132 (187)
T 3sho_A 84 NLRPTDLMIG-VSVWRYL-----------RDTVAALAGAAERGVPTM-------ALTDSSVSPPARIA 132 (187)
T ss_dssp TCCTTEEEEE-ECCSSCC-----------HHHHHHHHHHHHTTCCEE-------EEESCTTSHHHHHC
T ss_pred cCCCCCEEEE-EeCCCCC-----------HHHHHHHHHHHHCCCCEE-------EEeCCCCCcchhhC
Confidence 7888886655 6776643 477788888888898763 34555677888775
No 27
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=63.09 E-value=19 Score=31.75 Aligned_cols=99 Identities=16% Similarity=0.166 Sum_probs=65.9
Q ss_pred CEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcC
Q psy16139 44 NVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHC 123 (466)
Q Consensus 44 ~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l 123 (466)
.++|++=|+-|.+|+..++.++|+. .++..+..- ||+.--.-.+++.+.++++
T Consensus 3 giii~sHg~~A~gl~~~~~~i~G~~-----------------------~~i~av~~~----~~~~~~~~~~~i~~~i~~~ 55 (150)
T 3ipr_A 3 GIVIATHGALSDGAKDAATVIMGAT-----------------------ENIETVNLN----SGDDVQALGGQIKTAIENV 55 (150)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHSCC-----------------------CSEEEEEEC----TTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHcCCC-----------------------CCEEEEEec----CCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999853 235555431 4444445667888888888
Q ss_pred CCCcEEEEE--EeCCccc-----cccC------C----CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 124 TEDDVVLVL--ISGGGSA-----CLSS------P----KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 124 ~~~DlVLvL--ISGGGSA-----LL~~------P----~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
..+|=||+| +-||.-. ++.- | +.|++|.=+.++...- ..+.+++|+
T Consensus 56 ~~~~gvlvLtDl~GGSp~n~a~~~~~~~~~~~~~~v~vI~GvNLpmlle~~~~r-~~~~~l~el 118 (150)
T 3ipr_A 56 QQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSGTNLPMVLEAINHQ-LLGTPIAEA 118 (150)
T ss_dssp CSSSCEEEEESSTTSHHHHHHHHHHTTSCHHHHTTEEEEESCCHHHHHHHHHHH-HHTCCHHHH
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHhhhhccCCCEEEEeCCCHHHHHHHHHhh-hcCCCHHHH
Confidence 877767777 5677621 2211 2 2578888777665322 235677774
No 28
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=62.64 E-value=2.4 Score=36.59 Aligned_cols=13 Identities=38% Similarity=0.943 Sum_probs=11.2
Q ss_pred ccccCCCccccee
Q psy16139 366 SFDYKSPHCNQFL 378 (466)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (466)
-|||.||||-+|.
T Consensus 29 f~d~~Cp~C~~~~ 41 (175)
T 3gyk_A 29 FFDYNCPYCRRAM 41 (175)
T ss_dssp EECTTCHHHHHHH
T ss_pred EECCCCccHHHHH
Confidence 4799999999875
No 29
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=60.70 E-value=28 Score=29.80 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=65.2
Q ss_pred CEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcC
Q psy16139 44 NVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHC 123 (466)
Q Consensus 44 ~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l 123 (466)
.++|++=|+-|-+|+..++.++|+. .++..+.. + ||+.--.-.+++.+.++++
T Consensus 3 ~iii~sHG~~A~gl~~~~~~i~G~~-----------------------~~v~ai~~--~--~~~~~~~~~~~i~~~i~~~ 55 (135)
T 1pdo_A 3 AIVIGTHGWAAEQLLKTAEMLLGEQ-----------------------ENVGWIDF--V--PGENAETLIEKYNAQLAKL 55 (135)
T ss_dssp EEEEECSBTHHHHHHHHHHHHHCCC-----------------------SSEEEECB--C--TTCCHHHHHHHHHHHHTTS
T ss_pred eEEEEeChHHHHHHHHHHHHHcCCc-----------------------CCEEEEEe--e--CCCCHHHHHHHHHHHHHhc
Confidence 4788999999999999999999853 23555543 1 3444445778899999999
Q ss_pred CCCcEEEEE--EeCCc---c--cccc-CC----CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 124 TEDDVVLVL--ISGGG---S--ACLS-SP----KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 124 ~~~DlVLvL--ISGGG---S--ALL~-~P----~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
..+|=||+| +-||. . .++. .| +.|++|.=+.++... ...+.+++|+
T Consensus 56 ~~~~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi~GvNlpmlle~~~~-~~~~~~l~el 113 (135)
T 1pdo_A 56 DTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLMA-RDDDPSFDEL 113 (135)
T ss_dssp CCTTCEEEEESSTTSHHHHHHHHHHTTCTTEEEEESCCHHHHHHHHHH-HTTCCCHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHhccCCEEEEeCCCHHHHHHHHHh-cccCCCHHHH
Confidence 887766666 44554 1 2222 22 345788766664431 1238888886
No 30
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=59.78 E-value=36 Score=29.37 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=66.6
Q ss_pred CEEEEEech-hHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhc
Q psy16139 44 NVYLIGFGK-AVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKH 122 (466)
Q Consensus 44 ~i~VVg~GK-AA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~ 122 (466)
.++|++=|. -|-+|+..++.++|+. ++..+.-. ||+..-+--+++.+.+++
T Consensus 6 giiivsHG~~~A~~l~~~a~~i~G~~------------------------~~~aid~~----~~~~~~~~~~~i~~~i~~ 57 (130)
T 3gx1_A 6 EVIVMMHGRSTATSMVETVQELLSIE------------------------SGIALDMP----LTVEVKAMYEKLKQTVVK 57 (130)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTCC------------------------CCEEEEEC----TTSCHHHHHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHHHHcCcc------------------------CEEEEEec----CCCCHHHHHHHHHHHHHh
Confidence 689999999 9999999999999863 23333321 455555677899999999
Q ss_pred CCCCcEEEEEEeCCccc------ccc---CC---CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 123 CTEDDVVLVLISGGGSA------CLS---SP---KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 123 l~~~DlVLvLISGGGSA------LL~---~P---~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
+..+|=||+|.== ||. +.. .+ +.|++|.=..++.+...... +++|+
T Consensus 58 ~d~~~GVLiL~Dm-GSp~n~a~~l~~~~~~~v~vI~gvnlpmllea~~~~~~~~-~l~el 115 (130)
T 3gx1_A 58 LNPVKGVLILSDM-GSLTSFGNILTEELGIRTKTVTMVSTPVVLEAMRKASLGR-GLEDI 115 (130)
T ss_dssp SCCTTCEEEEECS-GGGGTHHHHHHHHHCCCEEEECSCCHHHHHHHHHHHHTTC-CHHHH
T ss_pred hCCCCCEEEEEeC-CCHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHhhcCC-CHHHH
Confidence 9888877777655 442 111 12 35788877777765444333 77776
No 31
>3dqq_A Putative tRNA synthase; structural genomics, unknown function, center for structural genomics of infecti diseases; 2.70A {Salmonella typhimurium} SCOP: c.146.1.1
Probab=59.40 E-value=12 Score=38.46 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEecCcccc
Q psy16139 298 GDDICRGYVDLVAWIDQLRKQRTIQVGKDKNN 329 (466)
Q Consensus 298 Arevar~laaia~~i~~~~~~~~il~gge~~~ 329 (466)
++.+++.++.|++.+.....+..+++||||+.
T Consensus 335 ~~~i~~~l~~i~~~l~~~~~~~livaGGdTs~ 366 (421)
T 3dqq_A 335 SHAVEALFSLLAARLAEGGITRFIVAGGETSG 366 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEESHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEecCHHHH
Confidence 45688999999999887667779999999975
No 32
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.61 E-value=5.6 Score=31.70 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=25.5
Q ss_pred hhhhhhhhhhcCcCChHHHHHHHHHhhC-CCCcee
Q psy16139 426 AENYLVKIKKMGFTDENEVRRALRKAAN-EPNHAC 459 (466)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 459 (466)
-+..+-++..|||. ++.+++|||..-| ..+.|+
T Consensus 9 ~e~~v~~L~~MGF~-~~~a~~AL~~t~n~~ve~A~ 42 (74)
T 2dag_A 9 DESVIIQLVEMGFP-MDACRKAVYYTGNSGAEAAM 42 (74)
T ss_dssp CHHHHHHHHHHSCC-HHHHHHHHHHHTSCCHHHHH
T ss_pred CHHHHHHHHHcCCC-HHHHHHHHHHhCCCCHHHHH
Confidence 35667788999996 7999999999886 354444
No 33
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=58.36 E-value=1.9 Score=32.77 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=27.7
Q ss_pred hhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 428 NYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
.+.-++-.|||+ .+++++||+.+-|.-+-||-+|
T Consensus 13 ~~Ia~Lm~mGFs-r~~ai~AL~~a~nnve~AaniL 46 (52)
T 2ooa_A 13 AKIAKLMGEGYA-FEEVKRALEIAQNNVEVARSIL 46 (52)
T ss_dssp HHHHHHHHTTCC-HHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCC-HHHHHHHHHHhCCCHHHHHHHH
Confidence 577788899996 5689999999999888777544
No 34
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=56.18 E-value=2.3 Score=36.64 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=29.7
Q ss_pred hhhhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeeec
Q psy16139 425 IAENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLLV 463 (466)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
.-+..+-++..|||+ ++.+++||+..-|.++-|+=+|.
T Consensus 77 ~~e~~v~~L~~MGF~-~~~a~~AL~~~~~~~e~A~e~L~ 114 (126)
T 2lbc_A 77 PPEEIVAIITSMGFQ-RNQAIQALRATNNNLERALDWIF 114 (126)
T ss_dssp CCHHHHHHHHHHTSC-HHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cCHHHHHHHHHcCCC-HHHHHHHHHHcCCCHHHHHHHHH
Confidence 345567788999997 89999999999887777765544
No 35
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=56.10 E-value=3 Score=32.10 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=27.7
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
|...-++-.||| |.+.++|||+-+-|.-|-||=+|
T Consensus 8 e~~Ia~L~smGf-sr~da~~AL~ia~Ndv~~AtNiL 42 (56)
T 2juj_A 8 SSEIENLMSQGY-SYQDIQKALVIAQNNIEMAKNIL 42 (56)
T ss_dssp HHHHHHHHTTTC-CHHHHHHHHHHTTTCSHHHHHHH
T ss_pred hHHHHHHHHcCC-CHHHHHHHHHHhcccHHHHHHHH
Confidence 445567788999 56789999999999988887443
No 36
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=52.32 E-value=2.1 Score=38.73 Aligned_cols=16 Identities=38% Similarity=0.737 Sum_probs=12.8
Q ss_pred cccccCCCcccceeee
Q psy16139 365 KSFDYKSPHCNQFLIQ 380 (466)
Q Consensus 365 ~~~~~~~~~~~~~~~~ 380 (466)
.-|||.||||.+|--.
T Consensus 27 ef~d~~Cp~C~~~~~~ 42 (191)
T 3l9s_A 27 EFFSFYCPHCYQFEEV 42 (191)
T ss_dssp EEECTTCHHHHHHHHT
T ss_pred EEECCCChhHHHhChh
Confidence 3589999999988543
No 37
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=52.23 E-value=2.1 Score=38.37 Aligned_cols=14 Identities=21% Similarity=0.544 Sum_probs=11.7
Q ss_pred cccccCCCccccee
Q psy16139 365 KSFDYKSPHCNQFL 378 (466)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (466)
.-|||.||||.+|-
T Consensus 28 ef~d~~Cp~C~~~~ 41 (185)
T 3feu_A 28 EVFALSCGHCRNME 41 (185)
T ss_dssp EEECTTCHHHHHHG
T ss_pred EEECCCChhHHHhh
Confidence 46899999999873
No 38
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=50.16 E-value=53 Score=28.33 Aligned_cols=96 Identities=17% Similarity=0.265 Sum_probs=63.9
Q ss_pred CEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcC
Q psy16139 44 NVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHC 123 (466)
Q Consensus 44 ~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l 123 (466)
.++|++=|+-|-+|+..++.++|+. .++..+..- ||+.--.-.+++.++++++
T Consensus 7 ~iiivsHG~~A~gl~~~~~~i~G~~-----------------------~~i~ai~~~----~~~~~~~~~~~i~~~i~~~ 59 (142)
T 3bed_A 7 KLILMSHGRMAEETLASTQMIVGEL-----------------------ADAAIVSMT----AEDGLSGTQAKLAAILKEA 59 (142)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCTT-----------------------CCCEEEEEC----TTTHHHHHHHHHHHHHHHH
T ss_pred cEEEEcChHHHHHHHHHHHHHcCCC-----------------------CCEEEEEec----CCCCHHHHHHHHHHHHHhc
Confidence 6889999999999999999999853 235555431 4555456778888899888
Q ss_pred CCCcEEEEE--EeCCc---cc--ccc-CC----CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 124 TEDDVVLVL--ISGGG---SA--CLS-SP----KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 124 ~~~DlVLvL--ISGGG---SA--LL~-~P----~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
.. |=||+| +-||. .| ++. -| +.|++|.=..++... .+.+++|+
T Consensus 60 ~~-~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi~GvNlpmlle~~~~---~~~~l~el 114 (142)
T 3bed_A 60 GN-VPTLVLADLXGGTPCNVAMMAMGTYPQLRVVAGLNLAMAIEAAVS---PVENVDEL 114 (142)
T ss_dssp CS-CCEEEEESSTTSHHHHHHHHHTTTCTTEEEEESCCHHHHHHHHHC---CCCCHHHH
T ss_pred CC-CCEEEEEECCCCHHHHHHHHHhccCCCEEEEeCCCHHHHHHHHHc---cCCCHHHH
Confidence 77 555555 44554 12 221 12 335677766665543 68888886
No 39
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=49.87 E-value=4.9 Score=41.04 Aligned_cols=36 Identities=36% Similarity=0.513 Sum_probs=29.2
Q ss_pred hhhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 426 AENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
-|+.+-.|..|||. ++.|+||||.+-|.|+.|.=+|
T Consensus 168 ~~~~i~~l~~MGf~-~~~~~~AL~a~~nn~~~A~e~L 203 (368)
T 1oqy_A 168 YETMLTEIMSMGYE-RERVVAALRASYNNPHRAVEYL 203 (368)
T ss_dssp HHHHHHHHHTTTCC-SHHHHHHHHHSCSSTTHHHHTT
T ss_pred hHHHHHHHHHcCCC-HHHHHHHHHHcCCCHHHHHHHH
Confidence 34456778899997 6899999999999999886544
No 40
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=49.41 E-value=2.9 Score=31.89 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=28.6
Q ss_pred hhhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 426 AENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
.|.++-++-.|||+ .++++|||..+-|..+-||-+|
T Consensus 9 ~e~~I~~L~~lGF~-r~~ai~AL~~a~nnve~Aa~iL 44 (53)
T 2d9s_A 9 LSSEIERLMSQGYS-YQDIQKALVIAHNNIEMAKNIL 44 (53)
T ss_dssp SHHHHHHHHHHTCC-HHHHHHHHHHTTTCHHHHHHHH
T ss_pred hHHHHHHHHHcCCC-HHHHHHHHHHhcCCHHHHHHHH
Confidence 45567788899996 5689999999999888777544
No 41
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=48.65 E-value=2.6 Score=38.44 Aligned_cols=12 Identities=50% Similarity=0.916 Sum_probs=10.8
Q ss_pred ccccCCCcccce
Q psy16139 366 SFDYKSPHCNQF 377 (466)
Q Consensus 366 ~~~~~~~~~~~~ 377 (466)
-|||.||||.+|
T Consensus 36 f~D~~CP~C~~~ 47 (202)
T 3gha_A 36 FGDYKCPSCKVF 47 (202)
T ss_dssp EECTTCHHHHHH
T ss_pred EECCCChhHHHH
Confidence 589999999987
No 42
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=48.58 E-value=42 Score=30.11 Aligned_cols=97 Identities=21% Similarity=0.259 Sum_probs=64.8
Q ss_pred CEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhcC
Q psy16139 44 NVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKHC 123 (466)
Q Consensus 44 ~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l 123 (466)
.++|++=|.-|-+|..+++-++|+. +++..+.- .|-++ -.-.+++.+.++++
T Consensus 23 ~iII~sHG~~A~gl~~s~~~i~G~~-----------------------~~v~av~~--~~~~~---~~~~~~~~~~i~~~ 74 (159)
T 3mtq_A 23 HYIFASHGSFANGLLNSVELILGKQ-----------------------PDIHTLCA--YVEEE---VDLTQQVEALVARF 74 (159)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCCC-----------------------TTEEEEEE--TSCSS---SCHHHHHHHHHHTS
T ss_pred eEEEEeCcHHHHHHHHHHHHHcCCC-----------------------CCeEEEEC--CCCCH---HHHHHHHHHHHHhc
Confidence 7999999999999999999999864 12333331 11111 13467888999999
Q ss_pred CCCcEEEEE--EeCCcc-----ccccCC----CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 124 TEDDVVLVL--ISGGGS-----ACLSSP----KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 124 ~~~DlVLvL--ISGGGS-----ALL~~P----~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
.++|=||+| +-||.- .++.-| +.|++|.=+.++.. .+.+.+++|+
T Consensus 75 ~~~~gVLiLtDl~GGSP~n~a~~~~~~~~v~vItGvNLpMlle~~~--~~~~~~l~el 130 (159)
T 3mtq_A 75 PAQDELIVITDIFAGSVNNEFVRFLSRPHFHLLSGLNLPLIIDLLI--SAAEDNTEKL 130 (159)
T ss_dssp CTTSEEEEEESCTTSHHHHHHHGGGGSTTEEEEECCCHHHHHHHHH--TTTCCCHHHH
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHhcCCCeEEEeCCCHHHHHHHHH--hhcCCCHHHH
Confidence 888888888 555541 233222 25688877776654 4556777764
No 43
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=46.53 E-value=3 Score=39.07 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=11.9
Q ss_pred cccccCCCccccee
Q psy16139 365 KSFDYKSPHCNQFL 378 (466)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (466)
--|||.||||.+|-
T Consensus 45 ef~Dy~CP~C~~~~ 58 (226)
T 3f4s_A 45 EYASLTCYHCSLFH 58 (226)
T ss_dssp EEECTTCHHHHHHH
T ss_pred EEECCCCHHHHHHH
Confidence 36899999999884
No 44
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=45.71 E-value=57 Score=28.49 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=64.7
Q ss_pred CEEEEEech-hHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhc
Q psy16139 44 NVYLIGFGK-AVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKH 122 (466)
Q Consensus 44 ~i~VVg~GK-AA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~ 122 (466)
.++|++=|. -|.+|+.+++.++|+. ++..+.-. |++..-+--+++.+.+++
T Consensus 6 giiIvtHG~s~A~~l~~~a~~i~G~~------------------------~~~aid~~----~~~~~~~~~~~i~~~i~~ 57 (139)
T 3gdw_A 6 GVFVLMHGDSTASSMLKTAQELLGTS------------------------IGTAMNMP----LTMEVQTMYEQLRNQVIT 57 (139)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTCC------------------------CCEEEEEC----TTSCHHHHHHHHHHHHHT
T ss_pred eEEEEcCCHHHHHHHHHHHHHHcCcc------------------------cEEEEEcc----CCCCHHHHHHHHHHHHHh
Confidence 689999999 9999999999999863 12333221 444555677888888888
Q ss_pred --CCCCcEEEEEEeCCcccc-----cc---CC---CCCCCHHHHHHHHHHHHhCCCChHHH
Q psy16139 123 --CTEDDVVLVLISGGGSAC-----LS---SP---KSPLSLEDKLKTIKLLVQSGANIKEL 170 (466)
Q Consensus 123 --l~~~DlVLvLISGGGSAL-----L~---~P---~~gITLeDk~~lt~~LL~sGA~I~EI 170 (466)
+..+|=||+|.==|.-.- .. .+ +.|++|.=..++.... ..+.+++|+
T Consensus 58 ~~~d~g~GVLiL~DmGSp~n~a~~l~~~~~~~v~vI~gvnlpmllea~~~~-~~~~~L~el 117 (139)
T 3gdw_A 58 QKESLNNGILLLTDMGSLNSFGNMLFEETGIRTKAITMTSTMIVLEAIRMA-SVGRSLEDI 117 (139)
T ss_dssp STGGGTTCEEEEECSGGGGGHHHHHHHHHCCCEEEECSCCHHHHHHHHHHH-HTTCCHHHH
T ss_pred hcCCCCCCEEEEEeCCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHHHHh-hcCCCHHHH
Confidence 546676666655433211 11 12 3578887777766543 357788876
No 45
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=45.56 E-value=10 Score=31.37 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=29.1
Q ss_pred hHHHHHHHhCCCccccchhh-hhhhhhh-hhhcCcCChHHHHHHHHHhhCCCCce
Q psy16139 406 VFQDIVKKLGLDKEELDLDI-AENYLVK-IKKMGFTDENEVRRALRKAANEPNHA 458 (466)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
-.+++.+++|+..----+=+ .+.-++. .+-.|+.+.+++++.|+++.+.|||-
T Consensus 79 ~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 133 (134)
T 2fwh_A 79 QDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQPHHHHH 133 (134)
T ss_dssp HHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-------
T ss_pred hHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCcccccC
Confidence 46788888887532111111 1111221 35679999999999999999999884
No 46
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=44.77 E-value=4.2 Score=33.43 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=23.9
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCcee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHAC 459 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
+..+-++..||| +++.+++||+..-+..+.|+
T Consensus 22 ~~~I~qL~~MGF-~~~~a~~AL~~~n~n~e~A~ 53 (85)
T 2dkl_A 22 SRLIKQLTDMGF-PREPAEEALKSNNMNLDQAM 53 (85)
T ss_dssp HHHHHHHHHHTC-CHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHcCCCHHHHH
Confidence 566778899999 56889999976655555544
No 47
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=44.09 E-value=19 Score=32.51 Aligned_cols=47 Identities=9% Similarity=0.045 Sum_probs=38.3
Q ss_pred ceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCccccccCCC
Q psy16139 93 EIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSPK 145 (466)
Q Consensus 93 ~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSALL~~P~ 145 (466)
.|-|+- ++++-||+...++|+++-+.+.+.+ +.++||||.-++.+..
T Consensus 3 ~V~V~g-s~~~~~~~~~~~~A~~lg~~La~~g-----~~lV~Ggg~GiM~aa~ 49 (171)
T 1weh_A 3 LLAVFV-SSRLSPEDPLYARWVRYGEVLAEEG-----FGLACGGYQGGMEALA 49 (171)
T ss_dssp EEEEEC-CSSCCTTSHHHHHHHHHHHHHHHTT-----EEEEECCSSTHHHHHH
T ss_pred EEEEEe-CCCCCCCcHHHHHHHHHHHHHHHCC-----CEEEeCChhhHHHHHH
Confidence 366664 4688999999999999999998876 8999999987776553
No 48
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=43.37 E-value=66 Score=31.20 Aligned_cols=23 Identities=30% Similarity=0.498 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHhCCCChHHHH
Q psy16139 149 SLEDKLKTIKLLVQSGANIKELN 171 (466)
Q Consensus 149 TLeDk~~lt~~LL~sGA~I~EIN 171 (466)
+++.-.++.+.|.++||||-|+.
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElG 54 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELG 54 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 67888888888888888887777
No 49
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=41.87 E-value=11 Score=30.71 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=22.4
Q ss_pred hhhhhhhhhhcCcCChHHHHHHHHHhhC
Q psy16139 426 AENYLVKIKKMGFTDENEVRRALRKAAN 453 (466)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (466)
-+..+-++..|||.. +.+++||+...|
T Consensus 29 ~e~~v~~L~~MGF~~-~~a~~AL~~t~n 55 (84)
T 1vek_A 29 NEEIVAQLVSMGFSQ-LHCQKAAINTSN 55 (84)
T ss_dssp CHHHHHHHHHHTCCH-HHHHHHHHHTTT
T ss_pred CHHHHHHHHHcCCCH-HHHHHHHHHHcC
Confidence 356777889999976 899999999864
No 50
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=41.74 E-value=25 Score=28.21 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=44.3
Q ss_pred cccCCCcccceeeeeehhhHHHHHHHhhcceeeccCcchhHHHHHHHhCCCccccchhhhhhhhhhhhhcCcCChHHHHH
Q psy16139 367 FDYKSPHCNQFLIQIELNSVFVALIEMSAKLVRFNDASVVFQDIVKKLGLDKEELDLDIAENYLVKIKKMGFTDENEVRR 446 (466)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (466)
+..-||+|.++.-.+.-+..+.....-...++..+-..--..++.+++|+..----+=+-.+--+..+-.|+.+.+++++
T Consensus 35 ~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~ 114 (130)
T 2kuc_A 35 FTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLK 114 (130)
T ss_dssp CCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHH
T ss_pred ECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHH
Confidence 34458888776433311111222222222333333221235678888887531110001011111113459999999999
Q ss_pred HHHHhhCCCCc
Q psy16139 447 ALRKAANEPNH 457 (466)
Q Consensus 447 ~~~~~~~~~~~ 457 (466)
.|++....++|
T Consensus 115 ~l~~~~~~~~~ 125 (130)
T 2kuc_A 115 KVKLGVESEGH 125 (130)
T ss_dssp HHHHHHSCCC-
T ss_pred HHHHHHHhccc
Confidence 99998876654
No 51
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=41.03 E-value=12 Score=29.30 Aligned_cols=34 Identities=35% Similarity=0.480 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcc
Q psy16139 146 SPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSD 179 (466)
Q Consensus 146 ~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~ 179 (466)
.+||+++..++-++|..|-|.|+++=.|-.+||.
T Consensus 8 gpit~qeylevK~ALaaSeAkiQQLmkVN~~ls~ 41 (63)
T 2w6a_A 8 GAVTLQEYLELKKALATSEAKVQQLMKVNSSLSD 41 (63)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhhHHHHHHHHHHhHhhhH
Confidence 4699999999999999999999999999999885
No 52
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=40.98 E-value=5 Score=33.39 Aligned_cols=27 Identities=33% Similarity=0.549 Sum_probs=18.1
Q ss_pred ccccccCCCcccc-----eeeeeehhhHHHHH
Q psy16139 364 KKSFDYKSPHCNQ-----FLIQIELNSVFVAL 390 (466)
Q Consensus 364 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 390 (466)
-.+|-||||||+. .|-+-|-..||--|
T Consensus 47 ~e~F~FkCP~CgEEFyG~~Lp~~EaeKVFELL 78 (95)
T 2k5c_A 47 VEEFVFKCPVCGEEFYGKTLPRREAEKVFELL 78 (95)
T ss_dssp HHHSEEECTTTCCEEETTSSCTTTHHHHHHHH
T ss_pred HHHHhhcCCCccHHHhcccCChHHHHHHHHHH
Confidence 4689999999985 34444555565544
No 53
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=40.87 E-value=4 Score=36.80 Aligned_cols=12 Identities=8% Similarity=0.102 Sum_probs=10.3
Q ss_pred ccccCCCcccce
Q psy16139 366 SFDYKSPHCNQF 377 (466)
Q Consensus 366 ~~~~~~~~~~~~ 377 (466)
-+||.||||.+|
T Consensus 21 f~D~~Cp~C~~~ 32 (182)
T 3gn3_A 21 FLEPTCPFSVKA 32 (182)
T ss_dssp EECTTCHHHHHH
T ss_pred EECCCCHhHHHH
Confidence 369999999876
No 54
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=40.79 E-value=12 Score=29.02 Aligned_cols=26 Identities=23% Similarity=0.332 Sum_probs=21.0
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhC
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAAN 453 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (466)
|..+-++..|||.. +.+++||+..-|
T Consensus 10 e~~v~~L~~MGF~~-~~a~~AL~~t~n 35 (64)
T 2crn_A 10 PSLLEPLLAMGFPV-HTALKALAATGR 35 (64)
T ss_dssp CSSHHHHHHTSCCH-HHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCH-HHHHHHHHHhCC
Confidence 34566788899976 889999998876
No 55
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=40.51 E-value=4.1 Score=36.40 Aligned_cols=15 Identities=27% Similarity=0.605 Sum_probs=12.1
Q ss_pred ccccCCCcccceeee
Q psy16139 366 SFDYKSPHCNQFLIQ 380 (466)
Q Consensus 366 ~~~~~~~~~~~~~~~ 380 (466)
-|||.||||.+|--.
T Consensus 21 f~d~~Cp~C~~~~~~ 35 (189)
T 3l9v_A 21 FFSFYCPPCYAFSQT 35 (189)
T ss_dssp EECTTCHHHHHHHHT
T ss_pred EECCCChhHHHHhHh
Confidence 589999999887543
No 56
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=39.44 E-value=4 Score=31.59 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=23.5
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhh-CCCCcee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAA-NEPNHAC 459 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 459 (466)
+..+-++..|||+ ++.+++|||... +.++.|.
T Consensus 10 ~~~v~~L~~MGF~-~~~a~~AL~~t~~~nve~A~ 42 (64)
T 1whc_A 10 LTALESLIEMGFP-RGRAEKALALTGNQGIEAAM 42 (64)
T ss_dssp CCHHHHHHTTTCC-HHHHHHHHHHHTSCCHHHHH
T ss_pred HHHHHHHHHcCCC-HHHHHHHHHHhcCCCHHHHH
Confidence 4556788899998 489999999874 4444443
No 57
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=38.86 E-value=6.3 Score=36.80 Aligned_cols=22 Identities=9% Similarity=0.276 Sum_probs=12.0
Q ss_pred hcCcCChHHHHHHHHHhhCCCC
Q psy16139 435 KMGFTDENEVRRALRKAANEPN 456 (466)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~ 456 (466)
-.|+.+..+++++|++....-.
T Consensus 215 ~~G~~~~~~L~~~l~~~~~~~~ 236 (241)
T 1v58_A 215 AVGLPDQKTLNIIMGNKLQHHH 236 (241)
T ss_dssp EESSCCHHHHHHHTTC------
T ss_pred ecCCCCHHHHHHHHHHHHHhhc
Confidence 3577788888888777665443
No 58
>2kui_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=37.50 E-value=25 Score=33.69 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=63.6
Q ss_pred CCCCcEEEEEEeCCccccccCC-CCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhccccc--chHhhhh-------cCC
Q psy16139 123 CTEDDVVLVLISGGGSACLSSP-KSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKG--GQLAEIV-------YPA 192 (466)
Q Consensus 123 l~~~DlVLvLISGGGSALL~~P-~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~VKG--GrLA~~a-------~pA 192 (466)
+.+++.|-+.+|-| .....+| .-|.|+++ ..+.|-..|..+.. +..=+.+.. |....-- .+.
T Consensus 59 v~~g~~V~l~vs~G-~~~v~vPdv~G~s~~~---A~~~L~~~Gl~~~~----~~~s~~~~~~~G~Vi~q~P~~G~~v~~g 130 (275)
T 2kui_A 59 VSAGDEITVNVSTG-PEQREIPDVSTLTYAE---AVKKLTAAGFGRFK----QANSPSTPELVGKVIGTNPPANQTSAIT 130 (275)
T ss_dssp ECSSCEEEEEEEES-CCEEECCCCCTTCHHH---HHHHHHHTSCCCEE----EEEECCCTTTBTSEEEESSCSSSEEETT
T ss_pred cCCCCEEEEEEecC-CcccccCccCCCCHHH---HHHHHHHCCCeecc----eEeCCCCCCcCCEEEEEcCCCCCCCCCC
Confidence 46788899999966 4466677 45677666 45567788987653 333344555 6655432 234
Q ss_pred eEEEEEEecCCCCCCCccccCc---cccCCC--CHHHHHHHHHHhCCC
Q psy16139 193 TLVSLIISDIVGDPLQDIASGP---TVLNED--LWSDARDIVIKYGLQ 235 (466)
Q Consensus 193 ~vvsLIlSDV~GDdL~~IASGP---TvPD~s--T~~DAl~IL~ky~L~ 235 (466)
..++|.+|. || ++||-. ++++|...|+..||.
T Consensus 131 ~~V~l~vS~-----------G~~~v~vPdv~G~~~~~A~~~L~~~Gl~ 167 (275)
T 2kui_A 131 NVVIIIVGS-----------GPATKDIPDVAGQTVDVAQKNLNVYGFT 167 (275)
T ss_dssp CCEEEEEEC-----------CCCEEECCCCCSSBHHHHHHHHHHTTCC
T ss_pred CEEEEEEeC-----------CCccccCCccCCCcHHHHHHHHHHCCCe
Confidence 567888874 43 577765 789999999999984
No 59
>2kkp_A Phage integrase; SAM-like domain, alpha-helical bundle, structural genomics, PSI-2, protein structure initiative; NMR {Moorella thermoacetica atcc 39073}
Probab=37.19 E-value=44 Score=25.98 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=30.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcc
Q psy16139 143 SPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSD 179 (466)
Q Consensus 143 ~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~ 179 (466)
.|+..||..|.++..+.|...|.+-..+|.++..|+.
T Consensus 48 ~~l~~It~~~i~~~~~~l~~~~~s~~t~~~~~~~l~~ 84 (117)
T 2kkp_A 48 IPLKKLQPADIQRLYASKLESGLSPTRVRYIHVVLHE 84 (117)
T ss_dssp SCTTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred eEHHHCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 6889999999999999999888877666666666653
No 60
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.28 E-value=5.3 Score=32.64 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=25.4
Q ss_pred hhhhhhhhhhhcCcCChHHHHHHHHHhhCCCCcee
Q psy16139 425 IAENYLVKIKKMGFTDENEVRRALRKAANEPNHAC 459 (466)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
.-+..+-++..|||+. +.+++||+..-+..+.|+
T Consensus 28 ~~e~~i~~L~~MGF~~-~~a~~AL~~t~~nve~A~ 61 (83)
T 2dai_A 28 VDEAALRQLTEMGFPE-NRATKALQLNHMSVPQAM 61 (83)
T ss_dssp CCHHHHHHHHHHTCCH-HHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHHcCCCH-HHHHHHHHHhCCCHHHHH
Confidence 3456778889999976 899999998755554443
No 61
>2khv_A Phage integrase; solution structure, GFT, NESG, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Nitrosospira multiformis atcc 25196}
Probab=34.74 E-value=25 Score=27.62 Aligned_cols=37 Identities=8% Similarity=0.177 Sum_probs=29.4
Q ss_pred cCCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhccc
Q psy16139 142 SSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDV 180 (466)
Q Consensus 142 ~~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~V 180 (466)
..|+..||-.|.+++.+.|.+.|. ..+|.++..|+++
T Consensus 41 ~~~l~~It~~~i~~~~~~l~~~~~--~t~~~~~~~l~~i 77 (106)
T 2khv_A 41 PLSVQDVDTKLIMKVLDPIWEQKP--ETASRLRGRIESV 77 (106)
T ss_dssp TSBSSSCCHHHHHHHHHHHHHHCH--HHHHHHHHHHHHH
T ss_pred CccHHHcCHHHHHHHHHHHHHhCh--HHHHHHHHHHHHH
Confidence 578999999999999999887774 6666666666653
No 62
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=33.79 E-value=7.4 Score=36.03 Aligned_cols=35 Identities=31% Similarity=0.360 Sum_probs=26.6
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
++-+-++..||| |++.++.||++.-+..+.|+=.|
T Consensus 164 eekV~~l~~MGf-~~~~a~~AL~~~~wd~~~A~e~L 198 (201)
T 3k9o_A 164 TKKIENLCAMGF-DRNAVIVALSSKSWDVETATELL 198 (201)
T ss_dssp HHHHHHHHTTTC-CHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHcCCCHHHHHHHH
Confidence 445567789999 57889999999988777665444
No 63
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=33.59 E-value=6.2 Score=36.29 Aligned_cols=52 Identities=25% Similarity=0.346 Sum_probs=30.1
Q ss_pred HHHHHHHhCCCccccchhhhh---------hhhhhhhhc----------------CcCChHHHHHHHHHhhCCCCce
Q psy16139 407 FQDIVKKLGLDKEELDLDIAE---------NYLVKIKKM----------------GFTDENEVRRALRKAANEPNHA 458 (466)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
+.++.+++|||.++++-++.. ++-.-..++ |..+..+++++|+++.||-.|-
T Consensus 126 L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvvng~~~~G~~~~e~l~~~i~~~~~~~~~~ 202 (205)
T 3gmf_A 126 FYDFMAARGMDRSTLDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLNEGHHH 202 (205)
T ss_dssp HHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSSEEEETTEECTTCCSHHHHHHHHHHHHTC----
T ss_pred HHHHHHHcCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHcCCccCCEEEECCEEEeCCCCHHHHHHHHHHHhhccccc
Confidence 456677889998877543221 111111222 4567788999999999987763
No 64
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=32.47 E-value=12 Score=32.74 Aligned_cols=14 Identities=36% Similarity=0.652 Sum_probs=11.8
Q ss_pred ccccCCCcccceee
Q psy16139 366 SFDYKSPHCNQFLI 379 (466)
Q Consensus 366 ~~~~~~~~~~~~~~ 379 (466)
-|||.||||-+|.-
T Consensus 29 f~d~~Cp~C~~~~~ 42 (195)
T 2znm_A 29 FFGYFCVHCHHFDP 42 (195)
T ss_dssp EECTTSCCTTSSCH
T ss_pred EECCCChhHHHHhH
Confidence 58999999998753
No 65
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=31.46 E-value=7.1 Score=35.63 Aligned_cols=14 Identities=43% Similarity=0.914 Sum_probs=11.8
Q ss_pred cccccCCCccccee
Q psy16139 365 KSFDYKSPHCNQFL 378 (466)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (466)
.-|+|.||||.+|-
T Consensus 119 eFf~~~C~~C~~~~ 132 (197)
T 1un2_A 119 EFFSFFCPHCYQFE 132 (197)
T ss_dssp EEECTTCHHHHHHH
T ss_pred EEECCCChhHHHhC
Confidence 35899999999874
No 66
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=30.85 E-value=8.3 Score=35.15 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=21.4
Q ss_pred cHHHHHhhhhcccccccc----cccccCCCcccceeee
Q psy16139 347 TIDELTKKMKVKNNKKKK----KSFDYKSPHCNQFLIQ 380 (466)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 380 (466)
.++.|.+.|.+-.+++.| --+||.||||.+|.-+
T Consensus 70 ~~~~l~~~~~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~ 107 (211)
T 1t3b_A 70 KLNSYKDEMIVYPAKNEKHVVTVFMDITCHYCHLLHQQ 107 (211)
T ss_dssp HHHTTGGGSEEECCTTCSEEEEEEECTTCHHHHHHHTT
T ss_pred hhhhccccceEecCCCCCEEEEEEECCCCHhHHHHHHH
Confidence 345565666664443333 2579999999987643
No 67
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=30.60 E-value=7.4 Score=34.82 Aligned_cols=14 Identities=36% Similarity=0.840 Sum_probs=11.4
Q ss_pred cccccCCCccccee
Q psy16139 365 KSFDYKSPHCNQFL 378 (466)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (466)
.-|||.||||.+|-
T Consensus 30 ~f~d~~Cp~C~~~~ 43 (193)
T 3hz8_A 30 EFFGYFCPHCAHLE 43 (193)
T ss_dssp EEECTTCHHHHHHH
T ss_pred EEECCCChhHHHHH
Confidence 35899999998763
No 68
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.23 E-value=47 Score=32.32 Aligned_cols=52 Identities=19% Similarity=0.101 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhCCCcEEecCCCccccHHHHHHHHHHHHHHHHHhcCCcEEEecCcccc
Q psy16139 271 AALLGAKWKAESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQLRKQRTIQVGKDKNN 329 (466)
Q Consensus 271 ~Al~AA~~~A~~lGy~~~ILss~l~GEArevar~laaia~~i~~~~~~~~il~gge~~~ 329 (466)
...+...+..++.|+.+.+..+.-.|++.+.++ +........++.+||+.|.
T Consensus 42 ~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~-------~~~~~~~d~vvv~GGDGTv 93 (337)
T 2qv7_A 42 RELPDALIKLEKAGYETSAYATEKIGDATLEAE-------RAMHENYDVLIAAGGDGTL 93 (337)
T ss_dssp HHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHH-------HHTTTTCSEEEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEEecCcchHHHHHH-------HHhhcCCCEEEEEcCchHH
Confidence 345566777888888888777666677765443 3333333457788888775
No 69
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=29.48 E-value=7.9 Score=33.38 Aligned_cols=13 Identities=15% Similarity=0.677 Sum_probs=11.2
Q ss_pred ccccCCCccccee
Q psy16139 366 SFDYKSPHCNQFL 378 (466)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (466)
-|||.||||.+|-
T Consensus 34 f~D~~Cp~C~~~~ 46 (175)
T 1z6m_A 34 FINVRCPYCRKWF 46 (175)
T ss_dssp EECTTCHHHHHHH
T ss_pred EECCCCcchHHHH
Confidence 5899999998875
No 70
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=29.34 E-value=14 Score=31.86 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=25.8
Q ss_pred hhhhhhcCcCChHHHHHHHHHhhCCCCceeeee
Q psy16139 430 LVKIKKMGFTDENEVRRALRKAANEPNHACLLL 462 (466)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
+..+..||| +++.+|.||++.-|..+-||=+|
T Consensus 80 v~~L~eMGF-~~~~a~~AL~~~~nd~erAlewL 111 (118)
T 4ae4_A 80 MSKFKEMGF-ELKDIKEVLLLHNNDQDNALEDL 111 (118)
T ss_dssp HHHHHHTTC-CHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHcCC-CHHHHHHHHHHcCCCHHHHHHHH
Confidence 567889999 57899999999998887776443
No 71
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=28.87 E-value=17 Score=26.95 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=25.2
Q ss_pred hhhhhhhhhcCcCChHHHHHHHHHhhCCCCceee
Q psy16139 427 ENYLVKIKKMGFTDENEVRRALRKAANEPNHACL 460 (466)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
|...-.+-.||| |.+.++|||--|-|.-+-||=
T Consensus 5 e~~I~~L~s~Gf-~~~~~~rAL~ia~Nnie~A~n 37 (46)
T 2oo9_A 5 SSEIENLMSQGY-SYQDIQKALVIAQNNIEMAKN 37 (46)
T ss_dssp HHHHHHHHHTTB-CHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHcCC-CHHHHHHHHHHhhccHHHHHH
Confidence 344556778999 567899999999988777663
No 72
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=28.79 E-value=1.4e+02 Score=25.84 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=34.0
Q ss_pred hcCCCCcEEEEEEeCCccccccCCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcccccchHhhhh
Q psy16139 121 KHCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKGGQLAEIV 189 (466)
Q Consensus 121 ~~l~~~DlVLvLISGGGSALL~~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~VKGGrLA~~a 189 (466)
..++++|+ ++.||..|.. .+..+..+.+.+.|+++- -+..-.+..|++.+
T Consensus 75 ~~~~~~d~-vI~iS~sG~t-----------~~~~~~~~~ak~~g~~vi-------~IT~~~~s~l~~~a 124 (186)
T 1m3s_A 75 PPLAEGDL-VIIGSGSGET-----------KSLIHTAAKAKSLHGIVA-------ALTINPESSIGKQA 124 (186)
T ss_dssp CCCCTTCE-EEEECSSSCC-----------HHHHHHHHHHHHTTCEEE-------EEESCTTSHHHHHC
T ss_pred cCCCCCCE-EEEEcCCCCc-----------HHHHHHHHHHHHCCCEEE-------EEECCCCCchHHhC
Confidence 55678885 4556665542 467788888888998762 34556677888765
No 73
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=28.73 E-value=1.2e+02 Score=28.87 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=46.9
Q ss_pred HHHHHHHhCCCcEEecCCCcc-----ccHHHHHHHHHHHHHHHHHhcCCcEEEecCcccccchhhHHHHHH
Q psy16139 275 GAKWKAESLGFQTVILSSDIE-----GLGDDICRGYVDLVAWIDQLRKQRTIQVGKDKNNIKEQDMEQNLQ 340 (466)
Q Consensus 275 AA~~~A~~lGy~~~ILss~l~-----GEArevar~laaia~~i~~~~~~~~il~gge~~~~~~~~~~~~~~ 340 (466)
++.+.|.+.|+..++.|+... .+..++-+.+..+-....+...++.|+.|-|-... .++...+.
T Consensus 24 ~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev~~~--~~~~~~l~ 92 (262)
T 3qy7_A 24 EMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEIRIY--GEVEQDLA 92 (262)
T ss_dssp HHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEEECC--TTHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEEecc--hhHHHHHh
Confidence 467889999999999998754 45667777777776665566678899999998764 34444443
No 74
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=28.52 E-value=23 Score=30.98 Aligned_cols=14 Identities=36% Similarity=0.854 Sum_probs=11.4
Q ss_pred cccccCCCccccee
Q psy16139 365 KSFDYKSPHCNQFL 378 (466)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (466)
.-|||.||||-+|.
T Consensus 31 ~f~d~~Cp~C~~~~ 44 (195)
T 3hd5_A 31 EFFAYTCPHCAAIE 44 (195)
T ss_dssp EEECTTCHHHHHHH
T ss_pred EEECCCCccHHHhh
Confidence 35899999998764
No 75
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=28.33 E-value=42 Score=30.74 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=36.7
Q ss_pred ceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCcc-ccccCC
Q psy16139 93 EIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGS-ACLSSP 144 (466)
Q Consensus 93 ~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGS-ALL~~P 144 (466)
.|-|+-+ +++-+|+...++|+++=+.+.+.+ +.+|||||. -++++-
T Consensus 3 ~V~V~gs-s~~~~~~~~~~~A~~lg~~La~~g-----~~lV~GGg~~GiM~aa 49 (191)
T 1t35_A 3 TICVFAG-SNPGGNEAYKRKAAELGVYMAEQG-----IGLVYGGSRVGLMGTI 49 (191)
T ss_dssp EEEEECC-SSCCSSTHHHHHHHHHHHHHHHTT-----CEEEECCCCSHHHHHH
T ss_pred EEEEEEC-CCCCCChHHHHHHHHHHHHHHHCC-----CEEEECCCcccHHHHH
Confidence 4667754 577899999999999999988865 679999997 666544
No 76
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.61 E-value=62 Score=31.51 Aligned_cols=52 Identities=13% Similarity=-0.006 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCcEEecCCCccccHHHHHHHHHHHHHHHHHhcCCcEEEecCcccc
Q psy16139 271 AALLGAKWKAESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQLRKQRTIQVGKDKNN 329 (466)
Q Consensus 271 ~Al~AA~~~A~~lGy~~~ILss~l~GEArevar~laaia~~i~~~~~~~~il~gge~~~ 329 (466)
...+...+..++.|+.+.+..+.-.|++.+.++ +........++.+||+.|.
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~-------~~~~~~~d~vvv~GGDGTl 95 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEKGDAARYVE-------EARKFGVATVIAGGGDGTI 95 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHH-------HHHHHTCSEEEEEESHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecCcchHHHHHH-------HHHhcCCCEEEEEccchHH
Confidence 345566777788888887776655666665443 2222334457777887765
No 77
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=27.29 E-value=3.4e+02 Score=24.27 Aligned_cols=54 Identities=24% Similarity=0.390 Sum_probs=35.0
Q ss_pred cCCCCcEEEEEEeCCccccccCCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcccccchHhhhhcCCeE
Q psy16139 122 HCTEDDVVLVLISGGGSACLSSPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKGGQLAEIVYPATL 194 (466)
Q Consensus 122 ~l~~~DlVLvLISGGGSALL~~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~VKGGrLA~~a~pA~v 194 (466)
.++++|+||+ ||..|.. .+..+..+...+.|+++- -++.-.++.|++.+.++.+
T Consensus 111 ~~~~~Dvvi~-iS~SG~t-----------~~~~~~~~~ak~~g~~vi-------~iT~~~~s~la~~a~~~d~ 164 (201)
T 3trj_A 111 LGNEDDILLV-ITTSGDS-----------ENILSAVEEAHDLEMKVI-------ALTGGSGGALQNMYNTDDI 164 (201)
T ss_dssp HCCTTCEEEE-ECSSSCC-----------HHHHHHHHHHHHTTCEEE-------EEEETTCCGGGGTCCTTCE
T ss_pred hCCCCCEEEE-EeCCCCC-----------HHHHHHHHHHHHCCCcEE-------EEECCCCCHHHHhhccCCE
Confidence 3688997665 5665543 467777777777777653 3455667777776654443
No 78
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=26.28 E-value=1.7e+02 Score=29.54 Aligned_cols=36 Identities=25% Similarity=0.415 Sum_probs=29.3
Q ss_pred CCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCcccc
Q psy16139 103 NLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSAC 140 (466)
Q Consensus 103 PlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSAL 140 (466)
+.|+...+..+ +-++++.+.++|.++|..||=|+-.
T Consensus 107 ~~pTr~nI~~a--L~~L~~~a~pgD~llfYFSGHG~q~ 142 (350)
T 4f6o_A 107 RVPTRANMIRA--MQWLVKDAQPNDSLFLHYSGHGGQT 142 (350)
T ss_dssp GSCCHHHHHHH--HHHHHTTCCTTCEEEEEEESCEEEC
T ss_pred cCCCHHHHHHH--HHHHHHhCCCCCEEEEEEcCCceec
Confidence 45788777655 5688899999999999999988754
No 79
>2pyq_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.50A {Jannaschia SP} SCOP: a.279.1.1
Probab=26.27 E-value=32 Score=29.98 Aligned_cols=34 Identities=32% Similarity=0.670 Sum_probs=27.0
Q ss_pred CCCccccchhhhhhhhhhhhhcCcCChHHHHHHHHHh
Q psy16139 415 GLDKEELDLDIAENYLVKIKKMGFTDENEVRRALRKA 451 (466)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (466)
|-|++||+ .+-+||| +||+|.+|.++.-.|+.+.
T Consensus 50 ~SD~~ELe-rVk~nfl--~KKLGl~d~~~ld~aI~~V 83 (114)
T 2pyq_A 50 GSDTAELE-TIKKNFL--MKKLGLADSESLMGGIQSV 83 (114)
T ss_dssp TTCHHHHH-HHHHHTT--TTTSCCCSSHHHHHHHHHH
T ss_pred cCCHHHHH-HHHHhHH--HHHcCCCCcHhHHHHHHHH
Confidence 45788876 3568998 5799999999988888776
No 80
>1b4u_B LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: c.56.6.1 PDB: 1bou_B
Probab=26.23 E-value=85 Score=30.60 Aligned_cols=44 Identities=27% Similarity=0.218 Sum_probs=36.0
Q ss_pred CCCCCC-HhhHHHHHHHHHHHhcCCCCcEEEEEEeCCccccccCC
Q psy16139 101 RNNLPD-EASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSP 144 (466)
Q Consensus 101 ~HPlPD-e~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSALL~~P 144 (466)
.+|.|+ +...+-++.|-+++++++.+.-|+++.|||-|==+..+
T Consensus 156 ~~p~~~~~~~~~lG~aL~~~~~~~~~d~~VlIIgSG~lSH~l~~~ 200 (302)
T 1b4u_B 156 TYPPPSGKRCFALGDSIRAAVESFPEDLNVHVWGTGGMSHQLQGP 200 (302)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHTSSSCCEEEEEEECCSSCCCSST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCccccCCCCC
Confidence 467776 46788899999999988778889999999998766544
No 81
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=26.15 E-value=59 Score=31.22 Aligned_cols=51 Identities=16% Similarity=0.127 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCcEEecCCCccccHHHHHHHHHHHHHHHHHhcCCcEEEecCcccc
Q psy16139 271 AALLGAKWKAESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQLRKQRTIQVGKDKNN 329 (466)
Q Consensus 271 ~Al~AA~~~A~~lGy~~~ILss~l~GEArevar~laaia~~i~~~~~~~~il~gge~~~ 329 (466)
...+......++.|+.+.+..+.-.|++.+.++.+ .. ....++.+||+.|.
T Consensus 26 ~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~-------~~-~~d~vv~~GGDGTl 76 (304)
T 3s40_A 26 TNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEF-------AS-KVDLIIVFGGDGTV 76 (304)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHH-------TT-TCSEEEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEEccCcchHHHHHHHh-------hc-CCCEEEEEccchHH
Confidence 44556667777778888777777788887766543 11 23346677777664
No 82
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=25.82 E-value=10 Score=33.19 Aligned_cols=13 Identities=38% Similarity=0.669 Sum_probs=10.7
Q ss_pred ccccCCCccccee
Q psy16139 366 SFDYKSPHCNQFL 378 (466)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (466)
-|||.||||.+|-
T Consensus 18 f~D~~Cp~C~~~~ 30 (186)
T 3bci_A 18 YGDYKCPYCKELD 30 (186)
T ss_dssp EECTTCHHHHHHH
T ss_pred EECCCChhHHHHH
Confidence 4799999998763
No 83
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=24.82 E-value=64 Score=31.22 Aligned_cols=35 Identities=37% Similarity=0.425 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHHhCCCChHHHH------------HHHHhhcccccc
Q psy16139 149 SLEDKLKTIKLLVQSGANIKELN------------KVRKKLSDVKGG 183 (466)
Q Consensus 149 TLeDk~~lt~~LL~sGA~I~EIN------------tVRKhLS~VKGG 183 (466)
+++...++.+.|.++|||+-|+. .-+-+.-+++.|
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G 76 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG 76 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 68888888888999999988888 555566667777
No 84
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=23.69 E-value=67 Score=29.91 Aligned_cols=46 Identities=11% Similarity=0.145 Sum_probs=37.0
Q ss_pred CceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCcc-ccccCC
Q psy16139 92 SEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGS-ACLSSP 144 (466)
Q Consensus 92 ~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGS-ALL~~P 144 (466)
+.|.|+-|+ . -+|+...++|+++=+.+.+.+ +.+|+|||. -++.+.
T Consensus 23 ~~v~Vfggs-~-~~~~~~~~~A~~lg~~La~~g-----~~lV~GGG~~GlM~a~ 69 (199)
T 3qua_A 23 WAVCVYCAS-G-PTHPELLELAAEVGSSIAARG-----WTLVSGGGNVSAMGAV 69 (199)
T ss_dssp CEEEEECCS-S-CCCHHHHHHHHHHHHHHHHTT-----CEEEECCBCSHHHHHH
T ss_pred CEEEEEECC-C-CCCHHHHHHHHHHHHHHHHCC-----CEEEECCCccCHHHHH
Confidence 468888765 4 789999999999999888765 568999997 776654
No 85
>2kd1_A DNA integration/recombination/invertion protein; protein structure initiative, structural genomics, unknown function, PSI-2; HET: DNA; NMR {Bacillus cereus atcc 14579}
Probab=23.62 E-value=52 Score=25.74 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=29.6
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcc
Q psy16139 143 SPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSD 179 (466)
Q Consensus 143 ~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~ 179 (466)
.|+..||..|.+.....|...|.+-..+|.++..|+.
T Consensus 46 ~~l~~it~~~i~~~~~~l~~~g~s~~t~~~~~~~l~~ 82 (118)
T 2kd1_A 46 IKLAKLTSLHMQNYVNSLRDEGLKRGTIEKIIKVIRN 82 (118)
T ss_dssp SBGGGCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCHHhCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 5788999999999999999888776666666665554
No 86
>1xwr_A Regulatory protein CII; all-alpha fold, DNA binding protein; 2.56A {Bacteriophage lambda} SCOP: a.35.1.9 PDB: 1zpq_A
Probab=23.28 E-value=36 Score=28.54 Aligned_cols=73 Identities=25% Similarity=0.224 Sum_probs=32.0
Q ss_pred HHHHHHHHhCCCcEEecCCCccccHHHHHHHHHHHHHHHHHhcCCcEEEecCcccccchhhHHHHHHHHhhhhcHHHHHh
Q psy16139 274 LGAKWKAESLGFQTVILSSDIEGLGDDICRGYVDLVAWIDQLRKQRTIQVGKDKNNIKEQDMEQNLQQVANQATIDELTK 353 (466)
Q Consensus 274 ~AA~~~A~~lGy~~~ILss~l~GEArevar~laaia~~i~~~~~~~~il~gge~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (466)
..-...|+.+|.+...+|-.-.|....++..++.+.. .+..+++..-.+|+ ++-|||
T Consensus 24 ~gq~~vA~~iGV~~StISR~k~~~~~~~~~lLa~l~l------------------~v~~~e~~~~~k~~-----~~~l~~ 80 (97)
T 1xwr_A 24 LGTEKTAEAVGVDKSQISRWKRDWIPKFSMLLAVLEW------------------GVVDDDMARLARQV-----AAILTN 80 (97)
T ss_dssp HCHHHHHHHHTCCTTTHHHHHHHHHHHHHHHHHHHHH------------------CCCHHHHHHHHHHH-----HHHTCC
T ss_pred HhHHHHHHHhCCCHHHHHHHHhhhHHHHHHHHHHHhc------------------CCChHHHHHHHHHH-----HHHHhc
Confidence 3346789999998877776566766666666665422 22333443333333 333432
Q ss_pred hhhcccccccccccccCCCcccceeeeeehh
Q psy16139 354 KMKVKNNKKKKKSFDYKSPHCNQFLIQIELN 384 (466)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (466)
| |.|-|..+--||++|
T Consensus 81 ~---------------k~p~~~~~~~qi~m~ 96 (97)
T 1xwr_A 81 K---------------KRPAATERSEQIQME 96 (97)
T ss_dssp -------------------------------
T ss_pred c---------------CCCCccccHHhhhcC
Confidence 2 789999999999876
No 87
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=22.52 E-value=13 Score=32.41 Aligned_cols=13 Identities=46% Similarity=1.083 Sum_probs=11.0
Q ss_pred ccccCCCccccee
Q psy16139 366 SFDYKSPHCNQFL 378 (466)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (466)
-|||.||||-+|.
T Consensus 32 f~d~~Cp~C~~~~ 44 (193)
T 2rem_A 32 IFGYTCPHCAHFD 44 (193)
T ss_dssp EECTTCHHHHHHH
T ss_pred EECCCChhHhhhh
Confidence 5799999998774
No 88
>2kj8_A Putative prophage CPS-53 integrase; INTS, INTC, YFDB, DNA integration, DNA recombination, structural genomics, protein structure initiative; NMR {Escherichia coli k-12}
Probab=22.00 E-value=90 Score=24.66 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcccc
Q psy16139 143 SPKSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVK 181 (466)
Q Consensus 143 ~P~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~VK 181 (466)
.|+..||-.|.+.+.+.|.+.| .- +++++.++.++
T Consensus 45 ~~l~~It~~~i~~~~~~l~~~~-s~---~t~~~~~~~l~ 79 (118)
T 2kj8_A 45 LEIQDIEPMQLLEVIRRFEDRG-AM---ERANKARRRCG 79 (118)
T ss_dssp SBTTSCCHHHHHHHHHHHHTTT-CH---HHHHHHHHHHH
T ss_pred CcHHHCCHHHHHHHHHHHHHcC-CH---HHHHHHHHHHH
Confidence 5889999999999999998888 33 45555555444
No 89
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=21.88 E-value=1.8e+02 Score=26.88 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=46.2
Q ss_pred cccchHhhhhcCCeEEEEEEecCCCCCCCccccCccccCCCCHHHHHHHHHHhCCCccchHHHHHHHccCCCCCCCCCCC
Q psy16139 180 VKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDARDIVIKYGLQNKVSKSVMTILSHETPHQDTKYFE 259 (466)
Q Consensus 180 VKGGrLA~~a~pA~vvsLIlSDV~GDdL~~IASGPTvPD~sT~~DAl~IL~ky~L~~~lP~sV~~~L~~~~~~~~~~~f~ 259 (466)
+..|.+.+...+.+.+.|-.=| ||. .....++.+|++|++
T Consensus 20 ~~~~~i~~~~~~~k~VaLTFDD-----------Gp~----~~~~~il~iL~~~~v------------------------- 59 (230)
T 2y8u_A 20 VPTGQVITQCTTPNTIALTFDD-----------GPS----EYTPQLLDLLSRYSA------------------------- 59 (230)
T ss_dssp CCSSSEECSCCSTTEEEEEEES-----------CCC----TTHHHHHHHHHHTTC-------------------------
T ss_pred CCCCceeecCCCCCEEEEEecC-----------Cch----hhHHHHHHHHHHcCC-------------------------
Confidence 5666666666667777777755 554 246789999999997
Q ss_pred CeeEEEEecHHHHHHHHHHHHHhCCCcEEec
Q psy16139 260 NVHNHIIGNNRAALLGAKWKAESLGFQTVIL 290 (466)
Q Consensus 260 ~v~n~IIgsN~~Al~AA~~~A~~lGy~~~IL 290 (466)
+...+++|++...-....+...+.|+..-..
T Consensus 60 ~ATfFv~g~~~~~~p~~~~~~~~~GheIg~H 90 (230)
T 2y8u_A 60 RATFFVLGDAAAQNPGLLQRMRDEGHQVGAH 90 (230)
T ss_dssp CCEEEECHHHHHHCHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEecHHHhHCHHHHHHHHHCCCEEEec
Confidence 2446788887543334455555667654444
No 90
>2q22_A Uncharacterized protein; YP_323524.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PG4; 2.11A {Anabaena variabilis atcc 29413} SCOP: d.365.1.1
Probab=21.76 E-value=81 Score=28.17 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHhCCCcc---chHHHHHHHccCCCCCCCCCCCCeeEEEEe----cHHHHHHHHHHHHHhCCCcEEecCC
Q psy16139 220 DLWSDARDIVIKYGLQNK---VSKSVMTILSHETPHQDTKYFENVHNHIIG----NNRAALLGAKWKAESLGFQTVILSS 292 (466)
Q Consensus 220 sT~~DAl~IL~ky~L~~~---lP~sV~~~L~~~~~~~~~~~f~~v~n~IIg----sN~~Al~AA~~~A~~lGy~~~ILss 292 (466)
.+.+||+.+|+.|+-... +.++-++.|++.... .....+++.|| |...|+.|-+...+++||.....-.
T Consensus 10 ~~i~~a~~~L~d~~~l~~ap~ls~~~r~~Lr~aL~~----~~~~sd~~~lGIcA~s~~~a~~ALr~~~~alg~~~~~~~~ 85 (139)
T 2q22_A 10 LTTADAKKILNKFNCLDIAPILKPSEKESVRRALIL----ITKLSDYQILGICADTADEGLLAMKTYSHALGYEVPIDLP 85 (139)
T ss_dssp CCHHHHHHHHHTTTTCSBCCCCCHHHHHHHHHHHHH----HHHTSSEEEEEEEESSHHHHHHHHHHHHHHTTCCCC-CCC
T ss_pred ccHHHHHHHHHHhhccccccCCCHHHHHHHHHHHHH----HHhhCCcEEEEeecCCHHHHHHHHHHHHHHhCCCccccCC
Confidence 468999999999976533 335555555542100 11234566665 6889999999999999998755433
Q ss_pred Cccc
Q psy16139 293 DIEG 296 (466)
Q Consensus 293 ~l~G 296 (466)
..+|
T Consensus 86 ~~~G 89 (139)
T 2q22_A 86 VVEG 89 (139)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 4443
No 91
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=21.73 E-value=14 Score=34.52 Aligned_cols=70 Identities=20% Similarity=0.209 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHHHhCCCChHHHHHHHHhhcccccchHhhhhcCCeEEEEEEecCCCCCCCccccCccccCCCCHHHHH
Q psy16139 147 PLSLEDKLKTIKLLVQSGANIKELNKVRKKLSDVKGGQLAEIVYPATLVSLIISDIVGDPLQDIASGPTVLNEDLWSDAR 226 (466)
Q Consensus 147 gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS~VKGGrLA~~a~pA~vvsLIlSDV~GDdL~~IASGPTvPD~sT~~DAl 226 (466)
++|.+++..+.+.+.++|++.-..|+ ..-.||-=...++ .+.+.+|+++.+|||| .-.|.+||+
T Consensus 128 ~l~~~~~~~~a~~a~eaGad~I~tst-----g~~~gga~~~~i~-------~v~~~v~~~ipVia~G----GI~t~~da~ 191 (225)
T 1mzh_A 128 YLNEEEIKKAVEICIEAGADFIKTST-----GFAPRGTTLEEVR-------LIKSSAKGRIKVKASG----GIRDLETAI 191 (225)
T ss_dssp GCCHHHHHHHHHHHHHHTCSEEECCC-----SCSSSCCCHHHHH-------HHHHHHTTSSEEEEES----SCCSHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEECC-----CCCCCCCCHHHHH-------HHHHHhCCCCcEEEEC----CCCCHHHHH
Confidence 57889999999999999999874444 1112331111111 1234457788999999 335789999
Q ss_pred HHHHHhC
Q psy16139 227 DIVIKYG 233 (466)
Q Consensus 227 ~IL~ky~ 233 (466)
+.|+ .|
T Consensus 192 ~~l~-aG 197 (225)
T 1mzh_A 192 SMIE-AG 197 (225)
T ss_dssp HHHH-TT
T ss_pred HHHH-hC
Confidence 9886 45
No 92
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=21.58 E-value=51 Score=30.97 Aligned_cols=46 Identities=7% Similarity=0.142 Sum_probs=36.7
Q ss_pred ceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCccccccCC
Q psy16139 93 EIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSACLSSP 144 (466)
Q Consensus 93 ~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSALL~~P 144 (466)
.|-|+- ++++-+|+...++|+++-..+.+.+ +.++||||.-++.+-
T Consensus 39 ~VaV~G-ss~~~~~~~~~~~A~~lg~~La~~g-----~~lVsGGg~GiM~aa 84 (217)
T 1wek_A 39 LVSVFG-SARFGEGHPAYEAGYRLGRALAEAG-----FGVVTGGGPGVMEAV 84 (217)
T ss_dssp EEEEEC-CSSCCTTSHHHHHHHHHHHHHHHHT-----CEEEECSCSHHHHHH
T ss_pred EEEEEe-CCCCCCCcHHHHHHHHHHHHHHHCC-----CEEEeCChhhHHHHH
Confidence 466775 4688899999999999998888765 789999997666544
No 93
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=21.27 E-value=1.2e+02 Score=28.27 Aligned_cols=47 Identities=15% Similarity=0.089 Sum_probs=35.2
Q ss_pred CceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCcc-ccccCC
Q psy16139 92 SEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGS-ACLSSP 144 (466)
Q Consensus 92 ~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGS-ALL~~P 144 (466)
+.|-|+=|+ .+-++....++|+++-..+.+.+ +.+|||||. -++.+.
T Consensus 14 ~~IaV~cGS-~~~~~~~y~~~A~~lg~~LA~~G-----~~vVsGGg~~GiM~aa 61 (215)
T 2a33_A 14 RRICVFCGS-SQGKKSSYQDAAVDLGNELVSRN-----IDLVYGGGSIGLMGLV 61 (215)
T ss_dssp SEEEEECCS-SCCSSHHHHHHHHHHHHHHHHTT-----CEEEECCCSSHHHHHH
T ss_pred CeEEEEECC-CCCCchHHHHHHHHHHHHHHHCC-----CEEEECCChhhHhHHH
Confidence 468888664 56566667889999888887765 678999996 776444
No 94
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.99 E-value=84 Score=29.49 Aligned_cols=47 Identities=17% Similarity=0.111 Sum_probs=37.1
Q ss_pred CceEEEecCCCCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCcc-ccccCC
Q psy16139 92 SEIEIRECARNNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGS-ACLSSP 144 (466)
Q Consensus 92 ~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGS-ALL~~P 144 (466)
+.|-|+=| +.+-+|+...++|+++-..+.+.+ +.||||||. -++++.
T Consensus 10 ~~V~V~gg-sr~~~~~~~~~~A~~lg~~LA~~g-----~~lV~GGg~~GlM~aa 57 (216)
T 1ydh_A 10 RKICVFCG-SHSGHREVFSDAAIELGNELVKRK-----IDLVYGGGSVGLMGLI 57 (216)
T ss_dssp SEEEEECC-SCCCSSHHHHHHHHHHHHHHHHTT-----CEEEECCCSSHHHHHH
T ss_pred CeEEEEeC-CCCCCCcHHHHHHHHHHHHHHHCC-----CEEEECCCcccHhHHH
Confidence 46888855 366688999999999999988765 578999997 777654
No 95
>3py9_A Protein kinase; pasta, muropeptide binding, phosphorylation, membran transferase; 2.20A {Staphylococcus aureus subsp} PDB: 3m9g_A
Probab=20.93 E-value=56 Score=31.73 Aligned_cols=95 Identities=22% Similarity=0.235 Sum_probs=60.9
Q ss_pred CCCCcEEEEEEeCCccccccCC-CCCCCHHHHHHHHHHHHhCCCChHHHHHHHHhhc-ccccchHhhhh-c-------CC
Q psy16139 123 CTEDDVVLVLISGGGSACLSSP-KSPLSLEDKLKTIKLLVQSGANIKELNKVRKKLS-DVKGGQLAEIV-Y-------PA 192 (466)
Q Consensus 123 l~~~DlVLvLISGGGSALL~~P-~~gITLeDk~~lt~~LL~sGA~I~EINtVRKhLS-~VKGGrLA~~a-~-------pA 192 (466)
+.+++.|-+.+|-| ...+.+| .-|.|+++ ..+.|-..|....++ ...-| .+.-|...+-. . +.
T Consensus 58 v~~g~~V~l~vS~G-~~~v~VPdv~G~s~~e---A~~~L~~~Gl~v~~~---~~~~s~~~~~G~Vi~Q~P~~G~~v~~~g 130 (294)
T 3py9_A 58 VERGDSVDVVISKG-PEKVKMPNVIGLPKEE---ALQKLKSLGLKDVTI---EKVYNNQAPKGYIANQSVTANTEIAIHD 130 (294)
T ss_dssp CCTTCEEEEEEECC-SCEEECCCCTTSBHHH---HHHHHHTTTCCCEEE---EEECCSSSCTTBEEEESSCC-CEEESSS
T ss_pred eCCCCEEEEEEcCC-CceeECCCCCCCCHHH---HHHHHHHCCCeEEEE---EEEECCCCCCCEEEEEcCCCCCEEecCC
Confidence 56888998999976 4567777 34677665 456788889875322 12223 34555555432 1 22
Q ss_pred eEEEEEEecCCCCCCCccccCc---cccCCC--CHHHHHHHHHHhCCC
Q psy16139 193 TLVSLIISDIVGDPLQDIASGP---TVLNED--LWSDARDIVIKYGLQ 235 (466)
Q Consensus 193 ~vvsLIlSDV~GDdL~~IASGP---TvPD~s--T~~DAl~IL~ky~L~ 235 (466)
..++|.+| +|| ++||-. +.++|.+.|+..||.
T Consensus 131 s~V~l~VS-----------~G~~~v~vPdv~G~s~~~A~~~L~~~Gl~ 167 (294)
T 3py9_A 131 SNIKLYES-----------LGIKQVYVEDFEHKSFSKAKKALEEKGFK 167 (294)
T ss_dssp CCEEEEEE-----------CCSCEEEECCCTTSBHHHHHHHHHTTTCE
T ss_pred CEEEEEEE-----------CCcccccCCCCCCCCHHHHHHHHHHCCCe
Confidence 34556554 465 578765 789999999999983
No 96
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=20.80 E-value=1.8e+02 Score=28.60 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=36.7
Q ss_pred CCEEEEEechhHHHHHHHHHHHhCCCCcceEEEecCCCccCccCCCCCCCceEEEecCCCCCCCHhhHHHHHHHHHHHhc
Q psy16139 43 NNVYLIGFGKAVLGMAVEIEAMFRPQRLKGILSVPFGSVGILKPQFNKNSEIEIRECARNNLPDEASCQNTQLIQNFVKH 122 (466)
Q Consensus 43 ~~i~VVg~GKAA~~MA~aae~~LG~~i~~GiVvtp~g~~~~~~~~~~~~~~I~V~egA~HPlPDe~Sv~Aa~~ILelv~~ 122 (466)
+++.|||.|-.++.+|..+.+. |. .+.+++...+++|..-.-..++.+.+.+++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~-------------------------~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~ 200 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GT-------------------------PASIGIILEYPLERQLDRDGGLFLKDKLDR 200 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TC-------------------------CEEEECSSSSSCTTTSCHHHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CC-------------------------eEEEEEcCCccchhhcCHHHHHHHHHHHHh
Confidence 4899999999999999888763 21 355666545666654445566666666554
No 97
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=20.48 E-value=94 Score=29.78 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=27.4
Q ss_pred CCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCccc
Q psy16139 105 PDEASCQNTQLIQNFVKHCTEDDVVLVLISGGGSA 139 (466)
Q Consensus 105 PDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGGSA 139 (466)
|+...+..+ +-++++++.++|.++|..||=|+-
T Consensus 55 ~t~~~i~~a--l~~l~~~~~~~D~~~~yfSGHG~~ 87 (285)
T 3bij_A 55 ATRAKVIDA--IGKAAKALGKGDIFMLSYSGHGGQ 87 (285)
T ss_dssp CCHHHHHHH--HHHHHHHCCTTCEEEEEEESCEEE
T ss_pred cCHHHHHHH--HHHHHHhCCCCCEEEEEEcCCccc
Confidence 777777744 778889999999999999998853
No 98
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=20.27 E-value=2.1e+02 Score=22.39 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=35.0
Q ss_pred CCCCCHhhHHHHHHHHHHHhcCCCCcEEEEEEeCCc-------------cccccCCCCCCCHHHHHHHHHHHHhC
Q psy16139 102 NNLPDEASCQNTQLIQNFVKHCTEDDVVLVLISGGG-------------SACLSSPKSPLSLEDKLKTIKLLVQS 163 (466)
Q Consensus 102 HPlPDe~Sv~Aa~~ILelv~~l~~~DlVLvLISGGG-------------SALL~~P~~gITLeDk~~lt~~LL~s 163 (466)
..+|+.++++..+++.+...........++++|+-. ...+..| ++.+++....+.+++.
T Consensus 58 ~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP---~~~~~L~~~l~~~~~~ 129 (136)
T 1dcf_A 58 VCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKP---VSLDNIRDVLSDLLEP 129 (136)
T ss_dssp CCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESS---CCHHHHHHHHHHHHSC
T ss_pred CCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHHHcCCCeEEECC---CCHHHHHHHHHHHhch
Confidence 567888888888877653332222344556666543 3344444 5677777777766654
Done!