BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16142
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q19749|ODP2_CAEEL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Caenorhabditis
elegans GN=F23B12.5 PE=1 SV=1
Length = 507
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 206/380 (54%), Positives = 253/380 (66%), Gaps = 58/380 (15%)
Query: 76 RLVREGN----DRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETP 131
RL GN +RVALPALSPTME+GT+VSW KKEGD+L+EGDLL EIETDKATMGFETP
Sbjct: 67 RLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETP 126
Query: 132 EEGYLAKILVPAGSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAP----APPP 187
EEGYLAKIL+ GSKDVPIGKL+CIIV+NE+DVAAFKDFKDD ++G SAP AP P
Sbjct: 127 EEGYLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDDG-ASSGGSAPAAEKAPEP 185
Query: 188 PKVAAAPPPPPP----KAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGA 243
K AA+ P PP +A P P+P +SG RV ASP AK+LAAE GLDLS + +
Sbjct: 186 AKPAASSQPSPPAQMYQAPSVPKSAPIP-HSSSG--RVSASPFAKKLAAENGLDLSGV-S 241
Query: 244 GSGLFGSITSADLSKASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQVI 303
GSG G I ++DLS+A GA S + + + +TD+P+S +R IAKRL +SK I
Sbjct: 242 GSGPGGRILASDLSQAPAKGAT---STTTQAVSGQDYTDIPLSNMRKTIAKRLTESKSTI 298
Query: 304 ---------------KLREQMNKALEK----RGAKLSINDFIIKATALASRRVPEANSSW 344
++RE++N L K + K+SINDFIIKA+ALA +RVPEANS W
Sbjct: 299 PHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISINDFIIKASALACQRVPEANSYW 358
Query: 345 QDTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESN 404
D+FIRE H VDVSVAV+T GL TPI+F+A KGL I ++
Sbjct: 359 MDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGLATI-------------------AS 399
Query: 405 DVKTLAAKAKEGKLQPHEFQ 424
++ LA +A+EGKLQPHEFQ
Sbjct: 400 EIVELAQRAREGKLQPHEFQ 419
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 39 KGGTVSISNLGMFG-IKNFSAIINPPQACILAVGSLSQRLV 78
+GGT ++SNLGMFG + +F+AIINPPQ+CILA+G S +LV
Sbjct: 419 QGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIGGASDKLV 459
>sp|P10515|ODP2_HUMAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Homo sapiens
GN=DLAT PE=1 SV=3
Length = 647
Score = 295 bits (755), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 178/369 (48%), Positives = 225/369 (60%), Gaps = 57/369 (15%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
+V LPALSPTM MGT+ W KK G+KL+EGDLLAEIETDKAT+GFE EEGYLAKILVP
Sbjct: 220 QVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPE 279
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFK----DDAPPAAGASAPAPPPPKVAAAPPPPPP 199
G++DVP+G +CIIVE E+D++AF D++ D P P P P P
Sbjct: 280 GTRDVPLGTPLCIIVEKEADISAFADYRPTEVTDLKPQVPPPTPPPVAAVPPTPQPLAPT 339
Query: 200 KAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSK- 258
+AP P+ P RV+ SPLAK+LA EKG+DL+ + G+G G IT D+
Sbjct: 340 PSAPCPATPAGPK------GRVFVSPLAKKLAVEKGIDLTQV-KGTGPDGRITKKDIDSF 392
Query: 259 --------ASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ--------- 301
+ P + PT G FTD+P+S +R VIA+RL+QSKQ
Sbjct: 393 VPSKVAPAPAAVVPPTGPGMAPVPT--GVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSI 450
Query: 302 ------VIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSV 355
V+ +R+++NK LE R +K+S+NDFIIKA+ALA +VPEANSSW DT IR+ H V
Sbjct: 451 DVNMGEVLLVRKELNKILEGR-SKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVV 509
Query: 356 DVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKE 415
DVSVAV+T GL TPIVF+A KG+ I +NDV +LA KA+E
Sbjct: 510 DVSVAVSTPAGLITPIVFNAHIKGVETI-------------------ANDVVSLATKARE 550
Query: 416 GKLQPHEFQ 424
GKLQPHEFQ
Sbjct: 551 GKLQPHEFQ 559
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 74/93 (79%)
Query: 82 NDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILV 141
+ +V LP+LSPTM+ GTI W KKEGDK+NEGDL+AE+ETDKAT+GFE+ EE Y+AKILV
Sbjct: 91 HQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILV 150
Query: 142 PAGSKDVPIGKLVCIIVENESDVAAFKDFKDDA 174
G++DVPIG ++CI V D+ AFK++ D+
Sbjct: 151 AEGTRDVPIGAIICITVGKPEDIEAFKNYTLDS 183
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDR 84
+GGT +ISNLGMFGIKNFSAIINPPQACILA+G+ +LV N++
Sbjct: 559 QGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEK 604
>sp|Q8BMF4|ODP2_MOUSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Mus musculus
GN=Dlat PE=1 SV=2
Length = 642
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 230/364 (63%), Gaps = 51/364 (14%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ LPALSPTM MGT+ W KK G+KL+EGDLLAEIETDKAT+GFE EEGYLAKILVP
Sbjct: 219 QIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPE 278
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G++DVP+G +CIIVE + D+AAF D++ P S P PP P
Sbjct: 279 GTRDVPLGAPLCIIVEKQEDIAAFADYR----PTEVTSLKPQAAPPAPPPVAAVPPTPQP 334
Query: 204 -APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADL-----S 257
AP+P+ P+ RV+ SPLAK+LAAEKG+DL+ + G+G G I D+ S
Sbjct: 335 VAPTPSAAPAGPKG---RVFVSPLAKKLAAEKGIDLTQV-KGTGPEGRIIKKDIDSFVPS 390
Query: 258 KASKAGAVAAPSKSAK--PTANGPFTDLPVSGVRGVIAKRLLQSKQ-------------- 301
KA+ A A A + P G FTD+P+S +R VIA+RL+QSKQ
Sbjct: 391 KAAPAAAAAMAPPGPRVAPAPAGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMG 450
Query: 302 -VIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVA 360
V+ +R+++NK LE +G K+S+NDFIIKA+ALA +VPEANSSW DT IR+ H VDVSVA
Sbjct: 451 EVLLVRKELNKMLEGKG-KISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVA 509
Query: 361 VNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQP 420
V+T GL TPIVF+A KGL I ++DV +LA+KA+EGKLQP
Sbjct: 510 VSTPAGLITPIVFNAHIKGLETI-------------------ASDVVSLASKAREGKLQP 550
Query: 421 HEFQ 424
HEFQ
Sbjct: 551 HEFQ 554
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 75/92 (81%)
Query: 82 NDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILV 141
+ +V LP+LSPTM+ GTI W KKEG+K++EGDL+AE+ETDKAT+GFE+ EE Y+AKILV
Sbjct: 90 HQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYMAKILV 149
Query: 142 PAGSKDVPIGKLVCIIVENESDVAAFKDFKDD 173
P G++DVP+G ++CI VE D+ AFK++ D
Sbjct: 150 PEGTRDVPVGSIICITVEKPQDIEAFKNYTLD 181
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDR 84
+GGT +ISNLGMFGIKNFSAIINPPQACILA+G+ +L+ N++
Sbjct: 554 QGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEK 599
>sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Rattus
norvegicus GN=Dlat PE=1 SV=3
Length = 632
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 229/363 (63%), Gaps = 50/363 (13%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ LPALSPTM MGT+ W KK G+KL+EGDLLAEIETDKAT+GFE EEGYLAKILVP
Sbjct: 210 QIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPE 269
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G++DVP+G +CIIVE + D+AAF D++ P S PP V PP P
Sbjct: 270 GTRDVPLGTPLCIIVEKQEDIAAFADYR----PTEVTSLKPQAPPPVPPPVAAVPPIPQP 325
Query: 204 -APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSK---- 258
AP+P+ P+ RV+ SPLAK+LAAEKG+DL+ + G+G G I D+
Sbjct: 326 LAPTPSAAPAGPKG---RVFVSPLAKKLAAEKGIDLTQV-KGTGPEGRIIKKDIDSFVPT 381
Query: 259 --ASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ--------------- 301
A A A A P PT G F D+P+S +R VIA+RL+QSKQ
Sbjct: 382 KAAPAAAAAAPPGPRVAPTPAGVFIDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGE 441
Query: 302 VIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAV 361
V+ +R+++NK LE +G K+S+NDFIIKA+ALA +VPEANSSW DT IR+ H VDVSVAV
Sbjct: 442 VLLVRKELNKMLEGKG-KISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAV 500
Query: 362 NTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPH 421
+T GL TPIVF+A KGL I ++DV +LA+KA+EGKLQPH
Sbjct: 501 STPAGLITPIVFNAHIKGLETI-------------------ASDVVSLASKAREGKLQPH 541
Query: 422 EFQ 424
EFQ
Sbjct: 542 EFQ 544
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 75/92 (81%)
Query: 82 NDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILV 141
+ +V LP+LSPTM+ GTI W KKEG+K++EGDL+AE+ETDKAT+GFE+ EE Y+AKILV
Sbjct: 82 HQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYMAKILV 141
Query: 142 PAGSKDVPIGKLVCIIVENESDVAAFKDFKDD 173
P G++DVP+G ++CI VE D+ AFK++ D
Sbjct: 142 PEGTRDVPVGSIICITVEKPQDIEAFKNYTLD 173
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDR 84
+GGT +ISNLGMFGIKNFSAIINPPQACILA+G+ +L+ N++
Sbjct: 544 QGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEK 589
>sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1
Length = 539
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 205/367 (55%), Gaps = 51/367 (13%)
Query: 82 NDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILV 141
+ + +P+LSPTM G I W KKEGDK+ G++L E+ETDKAT+ E EEGYLAKI+
Sbjct: 111 HQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVK 170
Query: 142 PAGSKDVPIGKLVCIIVENESDVAAFKDF----KDDAPPAAGASAPAPPPPKVAAAPPPP 197
GSK++ +G+++ I VE+E D+ FKD+ DA P PAPP + P P
Sbjct: 171 AEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKEEKVKQPSSP 230
Query: 198 PPKAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLS 257
P A PS P G RV+ASPLA++LA + + LS I G+G G I AD+
Sbjct: 231 PEPKASKPSTPPT-------GDRVFASPLARKLAEDNNVPLSDI-EGTGPEGRIVKADID 282
Query: 258 K---ASKAGAVAAPSKSAKPTANG-PFTDLPVSGVRGVIAKRLLQSKQVI---------- 303
+ +S GA A PSKS A + D+P S +R V A RL SKQ I
Sbjct: 283 EYLASSGKGATAKPSKSTDSKAPALDYVDIPHSQIRKVTASRLAFSKQTIPHYYLTVDTC 342
Query: 304 -----KLREQMNKALEKRGAK-LSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDV 357
LR Q+N E G K +S+ND ++KA ALA R+VP+ NSSW D +IR++ +V++
Sbjct: 343 VDKLMALRSQLNSFKEASGGKRISVNDLVVKAAALALRKVPQCNSSWTDDYIRQFKNVNI 402
Query: 358 SVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGK 417
+VAV T+ GL+ P+V DAD+KGL I +V+ LA KAKE
Sbjct: 403 NVAVQTENGLYVPVVKDADRKGLSTI-------------------GEEVRLLAQKAKENS 443
Query: 418 LQPHEFQ 424
L+P +++
Sbjct: 444 LKPEDYE 450
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 39 KGGTVSISNLGM-FGIKNFSAIINPPQACILAVGSLSQRLV 78
+GGT ++SNLG FGIK F A++NPPQA ILAVGS +R+V
Sbjct: 450 EGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVV 490
>sp|P12695|ODP2_YEAST Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LAT1 PE=1
SV=1
Length = 482
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 206/377 (54%), Gaps = 58/377 (15%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
+ +PALSPTM G + +W KKEGD+L+ G+++AEIETDKA M FE E+GYLAKILVP G
Sbjct: 37 IGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEG 96
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFK-DDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
+KD+P+ K + + VE+++DV AFKDFK +D+ + S A P A P +
Sbjct: 97 TKDIPVNKPIAVYVEDKADVPAFKDFKLEDSGSDSKTSTKAQPAEPQAEKKQEAPAEETK 156
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSK----- 258
+P S + R++ASPLAK +A EKG+ L + G+G G IT AD+
Sbjct: 157 TSAPEAKKSDVAAPQGRIFASPLAKTIALEKGISLKDVH-GTGPRGRITKADIESYLEKS 215
Query: 259 --------------ASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ--- 301
+ A + + P++ + D+P+S +R +I +RLLQS Q
Sbjct: 216 SKQSSQTSGAAAATPAAATSSTTAGSAPSPSSTASYEDVPISTMRSIIGERLLQSTQGIP 275
Query: 302 ------------VIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSW--QDT 347
++KLR+ +N A KLSIND ++KA +A++RVP+AN+ W +
Sbjct: 276 SYIVSSKISISKLLKLRQSLN-ATANDKYKLSINDLLVKAITVAAKRVPDANAYWLPNEN 334
Query: 348 FIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVK 407
IR++ +VDVSVAV T GL TPIV + + KGL I SN++K
Sbjct: 335 VIRKFKNVDVSVAVATPTGLLTPIVKNCEAKGLSQI-------------------SNEIK 375
Query: 408 TLAAKAKEGKLQPHEFQ 424
L +A+ KL P EFQ
Sbjct: 376 ELVKRARINKLAPEEFQ 392
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 39 KGGTVSISNLGMFGIKN-FSAIINPPQACILAVGSLSQRLVREG 81
+GGT+ ISN+GM N F++IINPPQ+ ILA+ ++ + V +
Sbjct: 392 QGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDA 435
>sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2
Length = 539
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 203/365 (55%), Gaps = 47/365 (12%)
Query: 82 NDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILV 141
+ + +P+LSPTM G I W KKEGDK+ G++L E+ETDKAT+ E EEG+LAKI+
Sbjct: 111 HQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVK 170
Query: 142 PAGSKDVPIGKLVCIIVENESDVAAFKDF--KDDAPPAAGASAPAPPPPKVAAAPPPPPP 199
G+K++ +G+++ I VE+E D+ FKD+ D PAA + PAP PK P
Sbjct: 171 EEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEEKVEKPASA 230
Query: 200 KAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKA 259
A P+ PS+ R++ASPLA++LA + + LSSI G+G G I AD+
Sbjct: 231 PEAKISKPSSAPSED-----RIFASPLARKLAEDNNVPLSSI-KGTGPEGRIVKADVEDF 284
Query: 260 SKAGA---VAAPSKSAKPTANG-PFTDLPVSGVRGVIAKRLLQSKQVI------------ 303
+G+ A PSK + D+P + +R V A RL SKQ I
Sbjct: 285 LASGSKETTAKPSKQVDSKVPALDYVDIPHTQIRKVTASRLAFSKQTIPHYYLTVDTCVD 344
Query: 304 ---KLREQMNKALEKRGAK-LSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSV 359
LR Q+N E G K +S+ND +IKA ALA R+VP+ NSSW D +IR++ +V+++V
Sbjct: 345 KMMGLRSQLNSFQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTDEYIRQFKNVNINV 404
Query: 360 AVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQ 419
AV T+ GL+ P+V DADKKGL I +V+ LA KAKE L+
Sbjct: 405 AVQTENGLYVPVVKDADKKGLSTI-------------------GEEVRFLAQKAKENSLK 445
Query: 420 PHEFQ 424
P +++
Sbjct: 446 PEDYE 450
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 39 KGGTVSISNLGM-FGIKNFSAIINPPQACILAVGSLSQRLV 78
+GGT ++SNLG FGIK F A+INPPQA ILA+GS +R+V
Sbjct: 450 EGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVV 490
>sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=lat1 PE=3 SV=1
Length = 483
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 200/366 (54%), Gaps = 53/366 (14%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
+ +PALSPTM G I ++ KK GDK+ GD+L EIETDKA + FE +EGYLAKIL+ G
Sbjct: 56 INMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKILIETG 115
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
+KDVP+GK + + VENE DVAA DF + A SA + + P ++
Sbjct: 116 TKDVPVGKPLAVTVENEGDVAAMADFTIEDSSAKEPSAKSGE----EKSAPSSEKQSKET 171
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADL-------- 256
SP+ V ++ G RV+ASPLA++LA EK LDLS I GSG G I D+
Sbjct: 172 SSPSNVSGEER--GDRVFASPLARKLAEEKDLDLSQI-RGSGPNGRIIKVDIENFKPVVA 228
Query: 257 ---SKASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK------------- 300
S + A A + +A A G + DLP+S +R +IA RL +SK
Sbjct: 229 PKPSNEAAAKATTPAASAADAAAPGDYEDLPLSNMRKIIASRLAESKNMNPHYYVTVSVN 288
Query: 301 --QVIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVS 358
++I+LR +N + R KLS+ND +IKAT A R+VPE N++W FIR+Y +VD+S
Sbjct: 289 MEKIIRLRAALNAMADGR-YKLSVNDLVIKATTAALRQVPEVNAAWMGDFIRQYKNVDIS 347
Query: 359 VAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKL 418
+AV T GL TP++ + GL +IS + K +A+ KL
Sbjct: 348 MAVATPSGLITPVIRNTHALGLAEISTLA-------------------KDYGQRARNNKL 388
Query: 419 QPHEFQ 424
+P E+Q
Sbjct: 389 KPEEYQ 394
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLV 78
+GGT +ISNLGMF + F+AIINPPQACILAVG+ +V
Sbjct: 394 QGGTFTISNLGMFPVDQFTAIINPPQACILAVGTTVDTVV 433
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 201/358 (56%), Gaps = 49/358 (13%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +PALSPTM G + W KKEGDK+N G+++AEIETDKATM E +EG LAKI++P
Sbjct: 4 KLLMPALSPTMTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQ 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
GS++VP+ L+ +++E +++ ++F A ++ +P +++ P+
Sbjct: 64 GSQNVPVNSLIAVLIEEGEELSGIEEF------IAKNNSNSPKKEEISKPAETIAPQNVK 117
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSAD-LSKASKA 262
+ T Q +V+ASPLAKRLA + + + I GSG G I D LS +
Sbjct: 118 EENITTASDQ---NNIKVFASPLAKRLAKIQNVRIEEI-KGSGPHGRIIKQDVLSHKGGS 173
Query: 263 GAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ---------------VIKLRE 307
A++ S P + P + +R +IAKRLL+SKQ ++ +RE
Sbjct: 174 KALSNKIVSRNPE---EYRLAPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIRE 230
Query: 308 QMNKAL-EKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTDKG 366
+NK+ + + AK+S+NDFII A A A + VP AN+SW D IR Y++VD+SVAV + G
Sbjct: 231 DINKSFGDDKSAKISVNDFIILAVAKALQEVPNANASWGDDAIRYYNNVDISVAVAIENG 290
Query: 367 LFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
L TPI+ +AD+K +VD+S++ + LI KA+E KL P EFQ
Sbjct: 291 LVTPIIRNADQKNIVDLSSEMKGLIK-------------------KARENKLTPEEFQ 329
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPAL 90
+GG +ISNLGM+GIKNF+AIINPPQ+CI+ VGS S+R + + ND++++ +
Sbjct: 329 QGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGSSSKRAIVK-NDQISIATI 379
>sp|P36413|ODP2_DICDI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Dictyostelium
discoideum GN=pdhC PE=1 SV=2
Length = 635
Score = 215 bits (547), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 192/366 (52%), Gaps = 54/366 (14%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPE-EGYLAKILVPA 143
V +PALSP+ME G I SW KKEGD++ GD +AE+ETDKATM F+ + GYLAKILVP
Sbjct: 209 VGMPALSPSMETGGIASWTKKEGDQIKAGDAIAEVETDKATMDFQYEDGNGYLAKILVPG 268
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G+ + I + VCIIV+N+ D F D+ S+ + + +
Sbjct: 269 GTSGIQINQPVCIIVKNKEDCDKFADYS-----VEEQSSSSSSSSQESTPSSSSSSSQES 323
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADL------- 256
PS + G R++A+P A+ A+ KG DLS+I G+G I AD+
Sbjct: 324 TPSQSSSQQTTRKSGERIFATPAARFEASSKGYDLSAIN-GTGPNNRILKADVLEFVPQK 382
Query: 257 ---SKASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQVI---------- 303
++ + K PT++G FTD+P S +R V A RL +SKQ I
Sbjct: 383 QEVAQQQQQQTTTTTKKPTTPTSSGEFTDIPHSNIRKVTAARLTESKQTIPHYYLTMECR 442
Query: 304 -----KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVS 358
KLR ++N K+S+NDFI+KA+A A R P NS+W D FIR YH++D++
Sbjct: 443 VDKLLKLRSELNAM---NTVKISVNDFIVKASAAALRDNPVVNSTWTDQFIRRYHNIDIN 499
Query: 359 VAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKL 418
VAVNT +GLFTPIV D KGL I S VK LA KA+ GKL
Sbjct: 500 VAVNTPQGLFTPIVRGVDMKGLNSI-------------------STSVKQLAEKAQNGKL 540
Query: 419 QPHEFQ 424
P EF+
Sbjct: 541 HPSEFE 546
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 73 LSQRLVREGNDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPE 132
L++R + +PALSP+M G IV W KKEGD++ GD++AE+ETDKATM F+ +
Sbjct: 74 LNKRSYSSKGKEITMPALSPSMTEGNIVQWKKKEGDQIKAGDVIAEVETDKATMDFQYED 133
Query: 133 -EGYLAKILVPAGSKDVPIGKLVCIIVENESDV-AAFKDFKDDAPPAAGASAPAPPPPKV 190
GYLAKIL+P G+K + I K + IIV + D+ +A K++K P + +S P
Sbjct: 134 GNGYLAKILIPEGTKGIEINKPIAIIVSKKEDIESAVKNYK---PSSQASSTP------- 183
Query: 191 AAAPPPPPPKAAPAPSPTPVPSQKTSG 217
P P + AP S P+ K G
Sbjct: 184 VQEEAPKPKQEAPKKSTKTYPAHKVVG 210
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLV 78
+ GT +ISNLGM GIK F+A+INPPQA ILAVG+ R+V
Sbjct: 546 ESGTFTISNLGMLGIKQFAAVINPPQAAILAVGTTETRVV 585
>sp|P20285|ODP2_NEUCR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mrp-3 PE=1 SV=2
Length = 458
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 207/362 (57%), Gaps = 54/362 (14%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
V +PALSPTM G I +W KK GDK+ G++L EIETDKA M FE EEG LAKIL +G
Sbjct: 37 VKMPALSPTMTSGGIGAWQKKPGDKIEPGEVLVEIETDKAQMDFEFQEEGVLAKILKDSG 96
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDF--KDDAPPAAGASAPAPP--PPK---VAAAPPPP 197
KDV +G + I+VE +DV AFKDF KD A G ++PA P PK A+AP P
Sbjct: 97 EKDVAVGNPIAILVEEGTDVNAFKDFTLKD----AGGETSPAVPKDEPKNESTASAPTPA 152
Query: 198 PPKAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLS 257
P A + + +T+ A P AKRLA EKG+DL ++ GSG G IT D+
Sbjct: 153 PTPAPEPENTSFTGRFQTALEREPNALPAAKRLAREKGIDLRNV-KGSGPGGKITEEDVK 211
Query: 258 KASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQS---------------KQV 302
KA + A + +A +TD+P+SG+R IA RL +S ++
Sbjct: 212 KALASAPAAGAAAAA-------YTDVPISGMRKTIAARLKESVTENPHFFVSTNLSVSKL 264
Query: 303 IKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVN 362
+KLR+ +N + + R KLS+NDF+IKA +AS+RVP NSSW+D IR++ +VDVSVAV
Sbjct: 265 LKLRQALNSSADGR-YKLSVNDFLIKAMGIASKRVPTVNSSWRDGVIRQFETVDVSVAVA 323
Query: 363 TDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHE 422
T GL TPIV + KGL I S VK LA KA++GKL+P E
Sbjct: 324 TPNGLITPIVKGVEGKGLESI-------------------SAAVKELAKKARDGKLKPEE 364
Query: 423 FQ 424
+Q
Sbjct: 365 YQ 366
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
Query: 39 KGGTVSISNLGMF-GIKNFSAIINPPQACILAVGS 72
+GG++SISN+GM +++F+AIINPPQA ILAVG+
Sbjct: 366 QGGSISISNMGMNPAVQSFTAIINPPQAAILAVGA 400
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 208 bits (529), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 194/362 (53%), Gaps = 60/362 (16%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +PALSPTM G + W KKEGDK+N G+++AEIETDKATM E +EG LAKI++P
Sbjct: 4 KILMPALSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQ 63
Query: 144 GSKDVPIGKLVCIIV---ENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPK 200
S++VP+ L+ ++ E ++D+ AF + P PK A P P
Sbjct: 64 NSQNVPVNSLIAVLSEEGEEKTDIDAF----------IAKNNSVSPSPKTDANLPKPHEN 113
Query: 201 AAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKAS 260
A V S R++ASPLAKRLA + + S+ GSG G I D+ +
Sbjct: 114 IANVEEQVTVIKHDVS---RIFASPLAKRLAKMRNIRFESV-KGSGPHGRIVKQDILSYT 169
Query: 261 KAGAVAAPSKSAKPTANGP--FTDLPVSGVRGVIAKRLLQSKQ---------------VI 303
+ A K + P + +P + +R +IAKRLL+SKQ ++
Sbjct: 170 PSTA------HNKIVSRNPEEYRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLL 223
Query: 304 KLREQMNKAL-EKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVN 362
+RE +NK E + ++S+NDFII A A A + VP AN+SW + IR Y++VD+SVAV
Sbjct: 224 DIREDINKFFSEDKSTRISVNDFIILAVAKALQEVPNANASWGEDAIRYYNNVDISVAVA 283
Query: 363 TDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHE 422
+ GL TPIV +A++K ++++S + ++LI KAK+ KL P E
Sbjct: 284 IENGLVTPIVKNANQKNILELSREMKALIK-------------------KAKDNKLTPEE 324
Query: 423 FQ 424
FQ
Sbjct: 325 FQ 326
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPAL 90
+GG +ISNLGM+GIKNF+AIINPPQ+CI+ VG+ ++R + + ND++ + +
Sbjct: 326 QGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGASAKRAIVK-NDQITIATI 376
>sp|Q0WQF7|OPD21_ARATH Dihydrolipoyllysine-residue acetyltransferase component 1 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2
Length = 637
Score = 201 bits (512), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 196/372 (52%), Gaps = 76/372 (20%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
+PALSPTM G I W KKEGDK+ GD++ EIETDKAT+ FE+ EEGYLAKIL+P GSK
Sbjct: 217 MPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEGSK 276
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAPS 206
DV +GK + +IVE+ + A K +SA + V P K
Sbjct: 277 DVAVGKPIALIVEDAESIEAIK----------SSSAGSSEVDTVKEVPDSVVDK------ 320
Query: 207 PTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKA------- 259
P+++ +G T++ SP AK L E GL+ SSI A SG +G++ +D+ A
Sbjct: 321 ----PTERKAGFTKI--SPAAKLLILEHGLEASSIEA-SGPYGTLLKSDVVAAIASGKAS 373
Query: 260 --SKAGAVAAPSKSAK-----------PTANGPFTDLPVSGVRGVIAKRLLQSKQVI-KL 305
S + PSK ++ + D P S +R +IAKRLL+SKQ I L
Sbjct: 374 KSSASTKKKQPSKETPSKSSSTSKPSVTQSDNNYEDFPNSQIRKIIAKRLLESKQKIPHL 433
Query: 306 REQMNKAL-----------EKRGAKLSINDFIIKATALASRRVPEANSSW--QDTFIREY 352
Q + L E G K+S+ND +IKA A+A R V +AN+ W + I
Sbjct: 434 YLQSDVVLDPLLAFRKELQENHGVKVSVNDIVIKAVAVALRNVRQANAFWDAEKGDIVMC 493
Query: 353 HSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAK 412
SVD+S+AV T+KGL TPI+ +AD+K + S IS +VK LA K
Sbjct: 494 DSVDISIAVATEKGLMTPIIKNADQKSI--------SAISL-----------EVKELAQK 534
Query: 413 AKEGKLQPHEFQ 424
A+ GKL PHEFQ
Sbjct: 535 ARSGKLAPHEFQ 546
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 18/114 (15%)
Query: 51 FGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTMEMGTIVSWAKKEGDKL 110
FG++NFS+ G +SQ ++ A+PALSPTM G +V W KKEGDK+
Sbjct: 72 FGVQNFSS-----------TGPISQTVL-------AMPALSPTMSHGNVVKWMKKEGDKV 113
Query: 111 NEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSKDVPIGKLVCIIVENESDV 164
GD+L EIETDKAT+ FE+ EEG+LAKILV GSKD+P+ + + I+VE E D+
Sbjct: 114 EVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSKDIPVNEPIAIMVEEEDDI 167
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVG 71
+GGT SISNLGM+ + NF AIINPPQA ILAVG
Sbjct: 546 QGGTFSISNLGMYPVDNFCAIINPPQAGILAVG 578
>sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=pdhC PE=3 SV=1
Length = 404
Score = 201 bits (511), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 194/357 (54%), Gaps = 58/357 (16%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +PALSPTM+ G + W KKEGDK+N G+++AEIETDKATM E+ +EG LAKI++P
Sbjct: 4 KILMPALSPTMKDGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQ 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
S++VP+ L+ ++ E A DA A S ++ KA
Sbjct: 64 NSQNVPVNSLIAVLSEEGESTADI-----DAFIAKNNSVS------LSLKTDTTLKKANE 112
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ + V S +++ASPLAKRLA + + L S+ GSG G I D+ S +
Sbjct: 113 SITNVEVVKHDLS---KIFASPLAKRLAKIRNIRLESV-QGSGPHGRIVKQDILSYSPST 168
Query: 264 AVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ---------------VIKLREQ 308
A ++ + +P + +R +IAKRLL+SKQ ++ +RE
Sbjct: 169 AYNRDTEE--------YRSVPNNNIRQIIAKRLLESKQTVPHFYLSIECNVDKLLDIRED 220
Query: 309 MNKAL-EKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTDKGL 367
+NK+ E + K+S+NDFII A A A + VP AN+SW + IR Y++VD+SVAV + G+
Sbjct: 221 INKSFSEDKLTKISVNDFIILAVAKALQEVPNANASWAEDAIRYYNNVDISVAVAIENGI 280
Query: 368 FTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
TPI+ DA+KK ++++ S+++K L KAK+ KL P EFQ
Sbjct: 281 VTPIIKDANKKNIIEL-------------------SHEMKILIKKAKDNKLTPVEFQ 318
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPAL 90
+GG +ISNLGM+GIKNF+AIIN PQ+CI+ VG+ ++R + + ND++ + +
Sbjct: 318 QGGGFTISNLGMYGIKNFNAIINTPQSCIMGVGASTKRAIVK-NDQIIIATI 368
>sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1
Length = 412
Score = 201 bits (511), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 194/360 (53%), Gaps = 56/360 (15%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +P LSPTM G + W KKEGDK+N G+++AEIETDKATM E +EG LAKI++P
Sbjct: 4 KILMPVLSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQ 63
Query: 144 GSKDVPIGKLVCIIV---ENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPK 200
S++VP+ L+ ++ E ++D+ AF ++ P+ PK A P P
Sbjct: 64 NSQNVPVNSLIAVLSEEGEEKTDIDAFIAKNNNVSPS----------PKTDANLPKPHEN 113
Query: 201 AAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKAS 260
A V S +++ASPLAKRLA + L S+ GSG G I D+ +
Sbjct: 114 IAKVEEQVAVIKHDAS---KIFASPLAKRLAKMGNIRLESV-KGSGPHGRIVKQDILSYT 169
Query: 261 KAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ---------------VIKL 305
+ V S P + +P + +R +IAKRLL+SKQ ++ +
Sbjct: 170 PS-TVHNKIVSRNPEE---YRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDI 225
Query: 306 REQMNKAL-EKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTD 364
RE +NK+ E + ++S+NDFII A A A + +P AN+SW + IR +++VD+SVAV +
Sbjct: 226 REDINKSFSEDKSTRISVNDFIILAVAKALQELPNANASWGEDAIRYHNNVDISVAVAIE 285
Query: 365 KGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
GL TPIV +A++K ++++S + + LI KAK+ KL P EFQ
Sbjct: 286 NGLVTPIVKNANQKNIIELSREMKELIK-------------------KAKDNKLTPEEFQ 326
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPAL 90
+GG +ISNLGM+GIKNF+AIINPPQ+CI+ VG+ ++R + + ND+V + +
Sbjct: 326 QGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGASAKRAIVK-NDQVTIATI 376
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 190/357 (53%), Gaps = 54/357 (15%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +PALSPTM G + W KKEGDK+N G+++AEIETDKATM E+ +EG LAKI++P
Sbjct: 4 KILMPALSPTMREGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQ 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
S++VP+ L+ ++ E D A F V+ +
Sbjct: 64 NSQNVPVNSLIAVLSEEGEDKADIDSF-------------IAQNNSVSLSLKTDATLKKS 110
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
S T V K +++ASPLAKRLA + L ++ GSG G I D+ S
Sbjct: 111 NDSITNVEGIK-HDSNKIFASPLAKRLAKIGDIRLENV-QGSGPHGRIVKQDI--LSYDS 166
Query: 264 AVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ---------------VIKLREQ 308
+ ++ + T + +P + +R +IAKRLL+SKQ ++ +RE
Sbjct: 167 STSSNKIVYRDTE--EYRSVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDVRED 224
Query: 309 MNKAL-EKRGAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTDKGL 367
+NK+ E + K+S+NDFII A A A + VP AN+SW + IR Y++VD+SVAV + G+
Sbjct: 225 INKSFSEDKVTKISVNDFIILAVAKALQEVPNANASWSEDAIRYYNNVDISVAVAIENGI 284
Query: 368 FTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
TPIV DA+KK ++++ S ++KTL KAK+ KL P EFQ
Sbjct: 285 VTPIVKDANKKNIIEL-------------------SREMKTLIKKAKDNKLTPIEFQ 322
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPAL 90
+GG +ISNLGM+GIKNF+AIIN PQ+CI+ VG+ ++R + + ND++ + +
Sbjct: 322 QGGGFTISNLGMYGIKNFNAIINTPQSCIMGVGASTKRAIVK-NDQIIIATI 372
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 194/379 (51%), Gaps = 67/379 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +PALSPTM GT+ W KEGD + GD+LAEIETDKA M FET + G +AKILVP
Sbjct: 4 EVKMPALSPTMTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPE 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPK-------------- 189
GS+++ +G+++ ++ E DV+ AA AS+ P +
Sbjct: 64 GSENIAVGQVIAVMAEAGEDVSQV---------AASASSQISEPSEKADVAQKETADSET 114
Query: 190 --VAAAPPPPPPKAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGL 247
+ A+ A + + R+ ASPLAKRLA + +DL + GSG
Sbjct: 115 ISIDASLDKAISNAGYGNKTENMTASYQEKAGRIKASPLAKRLAKKNHVDLKQVN-GSGP 173
Query: 248 FGSITSADL-------SKASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK 300
G I AD+ ++AS +V+ P S K T + P + +S +R VIA+RL +SK
Sbjct: 174 HGRIIKADIEAFIAEANQASSNPSVSTPEASGKITHDTPHNSIKLSNMRRVIARRLTESK 233
Query: 301 Q---------------VIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQ 345
Q ++KLR ++N++L + K+S+ND +IKA ALA + P N ++
Sbjct: 234 QNIPHIYLTVDVQMDALLKLRSELNESLAVQNIKISVNDMLIKAQALALKATPNVNVAFD 293
Query: 346 DTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESND 405
+ ++ D+SVAV+ + GL TPI+ AD K L S S +
Sbjct: 294 GDQMLQFSQADISVAVSVEGGLITPILKQADTKSL-------------------SALSVE 334
Query: 406 VKTLAAKAKEGKLQPHEFQ 424
+K L A+A+EG+LQP E+Q
Sbjct: 335 MKELIARAREGRLQPQEYQ 353
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQR 76
+GGT SISN+GMFGIK F+A+INPPQA ILA+GS +R
Sbjct: 353 QGGTSSISNMGMFGIKQFNAVINPPQASILAIGSGERR 390
>sp|P22439|ODPX_BOVIN Pyruvate dehydrogenase protein X component OS=Bos taurus GN=PDHX
PE=1 SV=3
Length = 501
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 195/399 (48%), Gaps = 83/399 (20%)
Query: 74 SQRLVREGNDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEE 133
S + +R ++ +P+LSPTME G IV W KKEG+ ++ GD L EIETDKA + + ++
Sbjct: 48 STQWLRADPIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDD 107
Query: 134 GYLAKILVPAGSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAA 193
G LAKI+V GSK++ +G L+ ++VE D + KD PP PP AA
Sbjct: 108 GILAKIVVAEGSKNIRLGSLIGLLVEEGEDWKHVEIPKDTGPP----------PP--AAK 155
Query: 194 PPPPPPKAAPAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITS 253
P PPP A P + TPV + G + SP A+ + + LD + G +G G T
Sbjct: 156 PSVPPPSAEPQIA-TPVKKEHPPGKVQFRLSPAARNILEKHALDANQ-GTATGPRGIFTK 213
Query: 254 AD---LSKASKAGAVAAP--------------------------------SKSAKPTANG 278
D L + + G + P S +P G
Sbjct: 214 EDALKLVQLKQTGKITEPRPTAALPTTPAAPLPPQAAATASYPRPMIPPVSTPGQPNVEG 273
Query: 279 PFTDLPVSGVRGVIAKRLLQSKQVIK-------------LREQMNKALEKRGAKLSINDF 325
FT++P S +R VIAKRL +SK I L + N L + K+S+NDF
Sbjct: 274 TFTEIPASNIRRVIAKRLTESKSTIPHAYATTDCDLGAVLTARQN--LVRDDIKVSVNDF 331
Query: 326 IIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISN 385
IIKA A+ +++P N+SW ++ S+D+SVAV TD+GL TP++ DA KGL +I
Sbjct: 332 IIKAAAVTLKQMPNVNASWDGEGAKQLPSIDISVAVATDRGLITPVIKDAAAKGLQEI-- 389
Query: 386 DSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
++ VK L+ KA++GKL P E+Q
Sbjct: 390 -----------------ADSVKALSKKARDGKLLPEEYQ 411
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSL 73
+GG+ SISNLGMFGI F+A+INPPQACILAVG
Sbjct: 411 QGGSFSISNLGMFGIDEFTAVINPPQACILAVGRF 445
>sp|Q9R9N3|ODP2_RHIME Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rhizobium meliloti (strain
1021) GN=pdhC PE=3 SV=1
Length = 447
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 194/380 (51%), Gaps = 63/380 (16%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
+ +PALSPTME G + W KEGDK+ GD++AEIETDKATM E +EG +AKI+VPAG
Sbjct: 5 ITMPALSPTMEEGNLAKWLVKEGDKVKSGDVIAEIETDKATMEVEAVDEGTVAKIVVPAG 64
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
++ V + L+ ++ DVA + A A A P AA P P AP
Sbjct: 65 TEGVKVNALIAVLAAEGEDVATAAKGGNGAAGAVPAPKPKETAETAPAAAPAPAAAPAPQ 124
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKA----- 259
+ P+ G R+++SPLA+RLA E G+DLS+I AGSG G + D+ A
Sbjct: 125 AAAPASPAPADGEGKRIFSSPLARRLAKEAGIDLSAI-AGSGPHGRVVKKDVETAVSGGA 183
Query: 260 ----------------SKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQVI 303
+K + A K +P G + +P G+R IAKRL++SKQ I
Sbjct: 184 AKPAGAPAAAPAPATLAKGMSEDAVLKLFEP---GSYELVPHDGMRKTIAKRLVESKQTI 240
Query: 304 ---------------KLREQMNKAL-EKRGA---KLSINDFIIKATALASRRVPEANSSW 344
LR Q+N A EK G KLS+ND +IKA ALA R VP+AN SW
Sbjct: 241 PHFYVSVDCELDALMALRAQLNAAAPEKDGKPVYKLSVNDMVIKALALALRDVPDANVSW 300
Query: 345 QDTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESN 404
D + ++ DV VAV+ GL TPIV A+ K L I SN
Sbjct: 301 TDQNMVKHKHADVGVAVSIPGGLITPIVRQAELKSLSAI-------------------SN 341
Query: 405 DVKTLAAKAKEGKLQPHEFQ 424
++K L +AKE KL+P E+Q
Sbjct: 342 EMKDLGKRAKERKLKPEEYQ 361
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
+GGT ++SN+GM G+K+F+A++NPP A ILAVG+ R+V + V ++ T+
Sbjct: 361 QGGTTAVSNMGMMGVKDFAAVVNPPHATILAVGAGEDRVVVRNKEMVIANVMTVTL 416
>sp|O00330|ODPX_HUMAN Pyruvate dehydrogenase protein X component, mitochondrial OS=Homo
sapiens GN=PDHX PE=1 SV=3
Length = 501
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 191/391 (48%), Gaps = 87/391 (22%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +P+LSPTME G IV W KKEG+ ++ GD L EIETDKA + + ++G LAKI+V
Sbjct: 58 KILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEE 117
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
GSK++ +G L+ +IVE D + KD PP PP K + P P P+ +
Sbjct: 118 GSKNIRLGSLIGLIVEEGEDWKHVEIPKDVGPP--------PPVSKPSEPRPSPEPQIS- 168
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSAD---LSKAS 260
PV + G R SP A+ + + LD S G +G G T D L +
Sbjct: 169 ----IPVKKEHIPGTLRFRLSPAARNILEKHSLDASQ-GTATGPRGIFTKEDALKLVQLK 223
Query: 261 KAG----------------------AVAAPS----------KSAKPTANGPFTDLPVSGV 288
+ G A A PS +P A G FT++P S +
Sbjct: 224 QTGKITESRPTPAPTATPTAPSPLQATAGPSYPRPVIPPVSTPGQPNAVGTFTEIPASNI 283
Query: 289 RGVIAKRLLQSKQ---------------VIKLREQMNKALEKRGAKLSINDFIIKATALA 333
R VIAKRL +SK V+K+R+ L K K+S+NDFIIKA A+
Sbjct: 284 RRVIAKRLTESKSTVPHAYATADCDLGAVLKVRQD----LVKDDIKVSVNDFIIKAAAVT 339
Query: 334 SRRVPEANSSWQDTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISF 393
+++P+ N SW ++ +D+SVAV TDKGL TPI+ DA KG+ +I
Sbjct: 340 LKQMPDVNVSWDGEGPKQLPFIDISVAVATDKGLLTPIIKDAAAKGIQEI---------- 389
Query: 394 RRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
++ VK L+ KA++GKL P E+Q
Sbjct: 390 ---------ADSVKALSKKARDGKLLPEEYQ 411
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSL 73
+GG+ SISNLGMFGI F+A+INPPQACILAVG
Sbjct: 411 QGGSFSISNLGMFGIDEFTAVINPPQACILAVGRF 445
>sp|Q8BKZ9|ODPX_MOUSE Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus
musculus GN=Pdhx PE=2 SV=1
Length = 501
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 196/403 (48%), Gaps = 91/403 (22%)
Query: 74 SQRLVREGNDRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEE 133
S +L++ +V +P+LSPTME G IV W +KEG+ ++ GD L EIETDKA + + ++
Sbjct: 48 STQLLQADPIKVLMPSLSPTMEQGNIVKWLRKEGEAVSAGDSLCEIETDKAVVTLDANDD 107
Query: 134 GYLAKILVPAGSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAA 193
G LAKI+V G+K++ +G L+ ++VE D + KD + P + PA
Sbjct: 108 GILAKIVVEEGAKNIQLGSLIALMVEEGEDWKQVEIPKDVSAPPPVSKPPA--------- 158
Query: 194 PPPPPPKAAPAPSPT-PVPSQKTSGGT-RVYASPLAKRLAAEKGLDLSSIGAGSGLFGSI 251
P+P P P P++K GT R SP A+ + + LD S G +G G
Sbjct: 159 ------PTQPSPQPQIPCPARKEHKGTARFRLSPAARNILEKHSLDASQ-GTATGPRGIF 211
Query: 252 TSAD-------------------------LSKASKAGAVAAPSK----------SAKPTA 276
T D LS + A A PS +P A
Sbjct: 212 TKEDALKLVELKQMGKITESRPASAPPPSLSASVPPQATAGPSYPRPMTPPVSIPGQPNA 271
Query: 277 NGPFTDLPVSGVRGVIAKRLLQSKQ---------------VIKLREQMNKALEKRGAKLS 321
G FT++P S +R VIAKRL +SK V+K+R + L K K+S
Sbjct: 272 AGTFTEIPASNIRRVIAKRLTESKSTVPHAYATADCDLGAVLKVR----RDLVKDDIKVS 327
Query: 322 INDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLV 381
+NDFII+A A+ +++P N +W ++ SVD+SVAV TDKGL TPI+ DA KG+
Sbjct: 328 VNDFIIRAAAVTLKQMPGVNVTWDGEGPKQLPSVDISVAVATDKGLITPIIKDAAAKGIQ 387
Query: 382 DISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEFQ 424
+I ++ VK L+ KA++GKL P E+Q
Sbjct: 388 EI-------------------ADSVKVLSKKARDGKLMPEEYQ 411
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSL 73
+GG+ SISNLGMFGI F+A+INPPQACILAVG
Sbjct: 411 QGGSFSISNLGMFGIDEFAAVINPPQACILAVGRF 445
>sp|O31550|ACOC_BACSU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Bacillus subtilis (strain 168)
GN=acoC PE=3 SV=1
Length = 398
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 47/319 (14%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
+V +P L M+ G + W KK GD + +G+ +A I+++K M E PE+G L I V
Sbjct: 4 KVVMPKLGMAMKQGEVSIWNKKVGDPVEKGESIASIQSEKIEMEIEAPEKGTLIDIKVKE 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G ++VP G +C I D + AGA P+ A P + P
Sbjct: 64 G-EEVPPGTAICYI----------GDANESVQEEAGAPVAEDNMPQ---AVQPVKQENKP 109
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
A S R+ SP+A+++A + GLDL + G+G G I D++K
Sbjct: 110 AASKK----------DRMKISPVARKIAEKAGLDLKQL-KGTGPGGRIVKDDVTK----- 153
Query: 264 AVAAPSK-SAKPTANGPFTDLPVSGVRGVIAKRLLQS---------------KQVIKLRE 307
A+A K AKP + ++PV+G+R VIA R+ +S ++ L++
Sbjct: 154 ALAEQKKDQAKPVSEQKAQEIPVTGMRKVIAARMQESLANSAQLTITMKADITKLATLQK 213
Query: 308 QMNKALEKR-GAKLSINDFIIKATALASRRVPEANSSWQDTFIREYHSVDVSVAVNTDKG 366
Q++ E+R G KL+I F+ +A LA + P NS +Q+ I + V + +AV + G
Sbjct: 214 QLSPTAEERYGTKLTITHFVSRAAVLALQAHPVLNSFYQNERIITHPHVHLGMAVALENG 273
Query: 367 LFTPIVFDADKKGLVDISN 385
L P++ A+K L++++
Sbjct: 274 LVVPVIRHAEKLSLIELAQ 292
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRV 85
+G T SI+NLG FG+++F+ I+NPP+ IL +G+ V +G + V
Sbjct: 312 QGSTFSITNLGAFGVEHFTPILNPPETGILGIGASYDTPVYQGEEIV 358
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 163/371 (43%), Gaps = 56/371 (15%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K D+++E D+LAE++ DKA + +P +G + ++ V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELKVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFK--DFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
+G+ + + FK D DDA A + A VA P A A
Sbjct: 67 -ATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQVQSTAEAGQDVAKEEQAQEP--AKA 123
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGA 264
+ RV A P ++ A EKG+D+ + GSG G + D+ GA
Sbjct: 124 TGAGQQDQAEVDPNKRVIAMPSVRKYAREKGVDIRKV-TGSGNNGRVVKEDIDSFVNGGA 182
Query: 265 V-AAPSKSAKPTANG-------------PFTDLPVSGVRGVIAKRLLQSKQ--------- 301
AAP ++A P P T +SG+R IAK ++ SK
Sbjct: 183 QEAAPQETAAPQETAAKPAAAPAPEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMD 242
Query: 302 ------VIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IREYH 353
++ R+Q + +G KL+ +++KA A ++ P N+S D + + H
Sbjct: 243 EVDVTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKTDEVIQKH 302
Query: 354 SVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKA 413
++ +A +T+KGL P+V +AD+K + +I S+++ LA KA
Sbjct: 303 YFNIGIAADTEKGLLVPVVKNADRKSVFEI-------------------SDEINGLATKA 343
Query: 414 KEGKLQPHEFQ 424
+EGKL P E +
Sbjct: 344 REGKLAPAEMK 354
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 30 EPLLAGLRKKGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQR-LVREGNDRVALP 88
E LA KG + +I+N+G G + F+ +IN P+ IL +G ++++ +VR+G + VA P
Sbjct: 345 EGKLAPAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAIVRDG-EIVAAP 403
Query: 89 ALSPTM 94
L+ ++
Sbjct: 404 VLALSL 409
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 163/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKPTANGPFTDLP------------------VSGVRGVIAKRLLQSKQVI---- 303
A ++SA N + P + +R IAK ++ SK
Sbjct: 168 TASNESADSATNEEVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 163/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKPTANGPFTDLP------------------VSGVRGVIAKRLLQSKQVI---- 303
A ++SA N + P + +R IAK ++ SK
Sbjct: 168 TASNESAASATNEEVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 151/336 (44%), Gaps = 51/336 (15%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +P+L ++ TI W KKEGD + +LL EIET+K T+ +P G + KI+
Sbjct: 4 KIIVPSLGESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKAD 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G+ +V +G+ + I E E A ++ P+ A+ P P P
Sbjct: 64 GA-NVAVGEEIGDINEGE---------------AVATNSNEAAKPQTASQPVPEKVPKKP 107
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
A + + +P ++L E LD ++I G+G G IT D+ + A
Sbjct: 108 AVANNTL-------------APSVQKLVTENKLDPNNI-KGTGKDGRITKGDVLETMNAP 153
Query: 264 AVAAPSKSAKPTANGPFTD-LPVSGVRGVIAKRLLQSK---------------QVIKLRE 307
AA S ++ A+ + + +S +R IA+RL S+ +VI LR
Sbjct: 154 TPAATSTTSSAKASEERVERVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRG 213
Query: 308 QMNKALEKR-GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVDVSVAVNTD 364
+ EK+ G KL F ++AT A + +P N+ D + Y+ D+ VAV T+
Sbjct: 214 KYKDEFEKKHGVKLGFMSFFVRATIEALKLIPSVNAEIDGDDLVYKNYY--DIGVAVGTE 271
Query: 365 KGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFS 400
+GL P+V DADK G DI L R K S
Sbjct: 272 QGLVVPVVRDADKMGFADIEKTIGGLAKKARDGKLS 307
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 40 GGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLV 78
GGT SISN G++G + IINPPQ+ IL + +R+V
Sbjct: 313 GGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERVV 351
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 164/373 (43%), Gaps = 69/373 (18%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + ++LV G+
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAPS 206
V +G ++ I +++ FK DD + K +P + +
Sbjct: 67 AV-VGDVIVKIDAPDAEEMQFKGHGDD--------EDSKKEEKEQESPVQEEASSTQSQE 117
Query: 207 PTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADL---------- 256
T V KT V A P ++ A E G+++ ++ GSG G IT D+
Sbjct: 118 KTEVDESKT-----VKAMPSVRKYARENGVNIKAVN-GSGKNGRITKEDIDAYLNGGSSE 171
Query: 257 --------SKASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK-------- 300
S+++ + V A + A P + P T + +R IAK ++ SK
Sbjct: 172 EGSNTSVASESTSSDVVNASATQALPEGDFPETTEKIPAMRKAIAKAMVNSKHTAPHVTL 231
Query: 301 -------QVIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IRE 351
++ R++ + ++G KL+ +++KA A ++ P N+S+ + +
Sbjct: 232 MDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVH 291
Query: 352 YHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAA 411
H ++ +A +TDKGL P+V AD+K + +I S+++ LA
Sbjct: 292 KHYWNIGIAADTDKGLLVPVVKHADRKSIFEI-------------------SDEINELAV 332
Query: 412 KAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 333 KARDGKLTSEEMK 345
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 33 LAGLRKKGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSP 92
L KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+
Sbjct: 339 LTSEEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLAL 398
Query: 93 TM 94
++
Sbjct: 399 SL 400
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 161/365 (44%), Gaps = 65/365 (17%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
+ +P L+ ++ GTI W K+ GD + +G+ L E+ETDK + E G L ++L +G
Sbjct: 4 IKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLKDSG 63
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
V +G+++ I E A +SAPAP + +A PA
Sbjct: 64 DT-VQVGEIIGTISEG----------------AGESSAPAPTEKTESKESVKEEKQAEPA 106
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGA 264
+Q + +R ASP A++LA EKG+DLS + G L G + D+ K +
Sbjct: 107 AQEVSEEAQ-SEAKSRTIASPSARKLAREKGIDLSQVPTGDPL-GRVRKQDVEAYEKPAS 164
Query: 265 -------VAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ---------------V 302
++ A+ + + P +S R IAKRL++ +Q V
Sbjct: 165 KPAPQQKQQPQAQKAQQSFDKPVEVQKMSRRRQTIAKRLVEVQQTSAMLTTFNEVDMTAV 224
Query: 303 IKLREQM-NKALEKRGAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVDVSV 359
+ LR++ ++ E+ KL F KA A ++ P N+ Q + +++++ D+ +
Sbjct: 225 MNLRKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNAEIQGDELIVKKFY--DIGI 282
Query: 360 AVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKLQ 419
AV D+GL P+V DAD+ + F+ ++ LA KA+ KL
Sbjct: 283 AVAADEGLVVPVVRDADR-------------------LTFAGIEKEIGELAKKARNNKLT 323
Query: 420 PHEFQ 424
E Q
Sbjct: 324 LSELQ 328
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 67/353 (18%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +P+L ++ TI W KKEGD + +LL EIET+K T+ P +G + KI
Sbjct: 4 KIIVPSLGESVTEATIAKWYKKEGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKTD 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G+ +V +G+ + I E AA + K A P K P
Sbjct: 64 GA-NVAVGEEIGEINEG---------------AAANTAGTNNESAKAQAVTQPTSEK--P 105
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
P V + +P ++L E LD ++I G+G G IT D+ +
Sbjct: 106 VEKPAVVNN---------ILAPSVQKLVTENKLDPNNI-KGTGRDGRITKGDVLETINTP 155
Query: 264 AVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK---------------QVIKLREQ 308
+ A + + T + +S +R IA+RL S+ +VI LR Q
Sbjct: 156 SAATSTPTVNKTNEERVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 215
Query: 309 MNKALEKRG-AKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVDVSVAVNTDK 365
+ EK+ KL F +KAT A + +P N+ D + Y+ D+ VAV T++
Sbjct: 216 YKEEFEKKHLVKLGFMSFFVKATIEALKLIPSVNAEIDGDDLVYKNYY--DIGVAVGTEQ 273
Query: 366 GLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKL 418
GL P+V DADK G F+E + TLA KA+EGKL
Sbjct: 274 GLVVPVVRDADKMG-------------------FAEVEKAIGTLAKKAREGKL 307
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 40 GGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLV 78
GGT SISN G++G + IINPPQ+ IL + +R V
Sbjct: 314 GGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAV 352
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKP----------------TANGPF--TDLPVSGVRGVIAKRLLQSKQVI---- 303
A ++SA T G F T + +R IAK ++ SK
Sbjct: 168 TASNESAASATSEEVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKP----------------TANGPF--TDLPVSGVRGVIAKRLLQSKQVI---- 303
A ++SA T G F T + +R IAK ++ SK
Sbjct: 168 TASNESAASATSEEVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKP----------------TANGPF--TDLPVSGVRGVIAKRLLQSKQVI---- 303
A ++SA T G F T + +R IAK ++ SK
Sbjct: 168 TASNESAASATSEEVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 163/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKPTANGPFTDLP------------------VSGVRGVIAKRLLQSKQVI---- 303
A ++SA + + P + +R IAK ++ SK
Sbjct: 168 TASNESAASATSEEVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 163/374 (43%), Gaps = 74/374 (19%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + +++V G+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAP- 205
V +G ++ I +++ FK DD +++ P + APA
Sbjct: 67 AV-VGDVIVKIDAPDAEDMQFKGHDDD-----------------SSSKEEPAKEEAPAEQ 108
Query: 206 SPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGAV 265
+P +++ V A P ++ A EKG+++ ++ +GSG G IT D+ GA
Sbjct: 109 APVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAV-SGSGKNGRITKEDVDAYLNGGAP 167
Query: 266 AAPSKSAKPTANGPFTDLP------------------VSGVRGVIAKRLLQSKQVI---- 303
A ++SA + + P + +R IAK ++ SK
Sbjct: 168 TASNESAASATSEEVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVT 227
Query: 304 -----------KLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IR 350
R++ + ++G KL+ +++KA A ++ P N+S+ + I
Sbjct: 228 LMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIV 287
Query: 351 EYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLA 410
H ++ +A +TD+GL P+V AD+K + I S+++ LA
Sbjct: 288 HKHYWNIGIAADTDRGLLVPVVKHADRKSIFQI-------------------SDEINELA 328
Query: 411 AKAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 329 VKARDGKLTADEMK 342
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 342 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 397
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 161/373 (43%), Gaps = 69/373 (18%)
Query: 87 LPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAGSK 146
LP + + G IV W K GD + E D+LAE++ DK+ + +P G + ++LV G+
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 147 DVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPAPS 206
V +G ++ I +++ FK DD + K +P + +
Sbjct: 67 AV-VGDVIVKIDAPDAEEMQFKGHGDD--------EDSKKEEKEQESPVQEEASSTQSQE 117
Query: 207 PTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAGA-- 264
T V KT V A P ++ A E G+++ ++ GSG G IT D+ G+
Sbjct: 118 KTEVDESKT-----VKAMPSVRKYARENGVNIKAVN-GSGKNGRITKEDIDAYLNGGSSE 171
Query: 265 ----------------VAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK-------- 300
V A + A P + P T + +R IAK ++ SK
Sbjct: 172 EGSNTSAASESTSSDVVNASATQALPEGDFPETTEKIPAMRKAIAKAMVNSKHTAPHVTL 231
Query: 301 -------QVIKLREQMNKALEKRGAKLSINDFIIKATALASRRVPEANSSWQDTF--IRE 351
++ R++ + ++G KL+ +++KA A ++ P N+S+ + +
Sbjct: 232 MDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVH 291
Query: 352 YHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAA 411
H ++ +A +TDKGL P+V AD+K + +I S+++ LA
Sbjct: 292 KHYWNIGIAADTDKGLLVPVVKHADRKSIFEI-------------------SDEINELAV 332
Query: 412 KAKEGKLQPHEFQ 424
KA++GKL E +
Sbjct: 333 KARDGKLTSEEMK 345
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVALPALSPTM 94
KG T +ISN+G G + F+ +IN P+ IL +G ++Q+ + + + VA P L+ ++
Sbjct: 345 KGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSL 400
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 162/379 (42%), Gaps = 84/379 (22%)
Query: 83 DRVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVP 142
+++ +P L ++ GTI W GDK+N+ D +AE+ TDK + G + +++
Sbjct: 4 EQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVGE 63
Query: 143 AGSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAA 202
G + + +G+++C I ++ A K + PAA +A P AA P + +
Sbjct: 64 EG-QTLQVGEMICKIETEGANPAEQKQEQ----PAASEAAENPVAKSAGAADQPNKKRYS 118
Query: 203 PAPSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKA 262
PA RLA E G+DL + G+G G IT D+ + +
Sbjct: 119 PA----------------------VLRLAGEHGIDLDQV-TGTGAGGRITRKDIQRLIET 155
Query: 263 GAV----------AAPS-----------KSAKPTANGPFTDLPVSGVRGVIAKRLLQSK- 300
G V AAP+ +++ P + ++PV+GVR IA + +SK
Sbjct: 156 GGVQEQNPEELKTAAPAPKSASKPEPKEETSYPASAAGDKEIPVTGVRKAIASNMKRSKT 215
Query: 301 --------------QVIKLREQMNKALEK-RGAKLSINDFIIKATALASRRVPEANSSWQ 345
++ R + + +K G L+ F +KA A A + P+ NS W
Sbjct: 216 EIPHAWTMMEVDVTNMVAYRNSIKDSFKKTEGFNLTFFAFFVKAVAQALKEFPQMNSMWA 275
Query: 346 DTFIREYHSVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESND 405
I + +++S+AV T+ LF P++ +AD+K + I + D
Sbjct: 276 GDKIIQKKDINISIAVATEDSLFVPVIKNADEKTIKGI-------------------AKD 316
Query: 406 VKTLAAKAKEGKLQPHEFQ 424
+ LA K ++GKL + Q
Sbjct: 317 ITGLAKKVRDGKLTADDMQ 335
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 39 KGGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLVREGNDRVAL 87
+GGT +++N G FG IIN PQA IL V S+ +R V N +A+
Sbjct: 335 QGGTFTVNNTGSFGSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAV 383
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 152/353 (43%), Gaps = 73/353 (20%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +P+L ++ TI W KK+GD + +LL EIET+K T+ P G + KI
Sbjct: 4 KIIVPSLGESITEATIAKWYKKQGDSVKTDELLLEIETEKVTLEVNAPCNGTIGKISKTE 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G+ +V +G+ + I NE A +++ A + P P VA
Sbjct: 64 GA-NVAVGEEIGEI--NEGASANTAGTNNESAKAQAVTQPTSEKPAVA------------ 108
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ T PS ++L E LD ++I G+G G IT D+
Sbjct: 109 --NNTLAPS--------------VQKLVTENKLDPNNI-KGTGRDGRITKGDVLATINTT 151
Query: 264 AVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK---------------QVIKLREQ 308
+AP+ S + + +S +R IA+RL S+ +VI LR Q
Sbjct: 152 TTSAPAIS--KSNEERVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 209
Query: 309 MNKALEKRGA-KLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVDVSVAVNTDK 365
+ EK+ A KL F +KAT A + +P N+ D + Y+ D+ VAV T++
Sbjct: 210 YKEEFEKKHAVKLGFMSFFVKATIEALKLIPSVNAEIDGDDLVYKNYY--DIGVAVGTEQ 267
Query: 366 GLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKL 418
GL P+V DADK G F+E + LA +A+EGKL
Sbjct: 268 GLVVPVVRDADKMG-------------------FAEVEKTIGILAKQAREGKL 301
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 40 GGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLV 78
GGT SISN G++G + IINPPQ+ IL + +R V
Sbjct: 308 GGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAV 346
>sp|Q49XM4|ODO2_STAS1 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=odhB PE=3 SV=1
Length = 424
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 147/344 (42%), Gaps = 45/344 (13%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K+ GD +++G+ + E+ETDK + + E G L ++L
Sbjct: 3 EVKVPELAESITEGTIAEWLKQVGDSVDKGEAIVELETDKVNVEVVSEEAGVLQELLANE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPP-PKVAAAPPPPPPKAA 202
G V +G+ + ++ E + + APA PK A
Sbjct: 63 GDT-VEVGQAIAVVGEGSGNNT--------------SEAPAKQEAPKQETETSTDDKSAQ 107
Query: 203 PAPSPTPVPSQKTS-GGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASK 261
PA + + K+ RV A+P A++ A EKG+DLS I A S D S+
Sbjct: 108 PAEATSNDTDDKSQDNNQRVNATPSARKYAREKGIDLSEIAAASNDVVRKEHVDQSQTQT 167
Query: 262 AGAV----AAPSKSAKPTANG---PFTDLPVSGVRGVIAKRLLQ---------------S 299
+ AA ++ K T P +S + AK+LL+
Sbjct: 168 STQQQAQPAAKEETKKLTQQNPSKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEIDM 227
Query: 300 KQVIKLREQMNKAL--EKRGAKLSINDFIIKATALASRRVPEANSSW--QDTFIREYHSV 355
V+ LR++ + + G KL F KA A ++ PE N+ D ++Y+
Sbjct: 228 TNVMDLRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQYY-- 285
Query: 356 DVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKF 399
D+ VAV+T+ GL P V D DKK +I ++ +L R K
Sbjct: 286 DIGVAVSTEDGLLVPFVRDCDKKNFAEIEDEIGNLAKKARDKKL 329
>sp|Q5HPC7|ODO2_STAEQ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3
SV=1
Length = 420
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 70/363 (19%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
V +P L+ ++ GTI W K GD +++G+ + E+ETDK + + E G L++ L G
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEG 63
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
V +G+ V ++ E + + + + K A P ++ P
Sbjct: 64 DT-VEVGQAVAVVGEGQVNTS--------------NDSSNESSQKDEAKEKETPKQSNPN 108
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSI-GAGSGLFGSITSADLSKASKAG 263
S + + + + R+ A+P A+R A + G+DLS + G G+ + + D+ + K+
Sbjct: 109 SSES--ENTQDNSQQRINATPSARRHARKNGVDLSEVSGKGNDV---LRKDDVENSQKSS 163
Query: 264 AVAAPSKS------AKPTANG---PFTDLPVSGVRGVIAKRLLQ-SKQ------------ 301
+ A S+S +K T N P +S + AK+LL+ S Q
Sbjct: 164 SQTAKSESKSQNSGSKQTNNNPSKPVIREKMSRRKKTAAKKLLEVSNQTAMLTTFNEVDM 223
Query: 302 --VIKLREQMNKAL--EKRGAKLSINDFIIKATALASRRVPEANSSW--QDTFIREYHSV 355
V+ LR++ + + G KL F KA A ++ PE N+ D ++++
Sbjct: 224 TNVMDLRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQFY-- 281
Query: 356 DVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKE 415
D+ +AV+TD GL P V D DKK F+E ++ LA KA++
Sbjct: 282 DIGIAVSTDDGLLVPFVRDCDKKN-------------------FAEIEQEIANLAVKARD 322
Query: 416 GKL 418
KL
Sbjct: 323 KKL 325
>sp|Q8CSL9|ODO2_STAES Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1
Length = 420
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 70/363 (19%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
V +P L+ ++ GTI W K GD +++G+ + E+ETDK + + E G L++ L G
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEG 63
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
V +G+ V ++ E + + + + K A P ++ P
Sbjct: 64 DT-VEVGQAVAVVGEGQVNTS--------------NDSSNESSQKDEAKEKETPKQSNPN 108
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSI-GAGSGLFGSITSADLSKASKAG 263
S + + + + R+ A+P A+R A + G+DLS + G G+ + + D+ + K+
Sbjct: 109 SSES--ENTQDNSQQRINATPSARRHARKNGVDLSEVSGKGNDV---LRKDDVENSQKSS 163
Query: 264 AVAAPSKS------AKPTANG---PFTDLPVSGVRGVIAKRLLQ-SKQ------------ 301
+ A S+S +K + N P +S + AK+LL+ S Q
Sbjct: 164 SQTAKSESKSQNSGSKQSNNNPSKPVIREKMSRRKKTAAKKLLEVSNQTAMLTTFNEVDM 223
Query: 302 --VIKLREQMNKAL--EKRGAKLSINDFIIKATALASRRVPEANSSW--QDTFIREYHSV 355
V+ LR++ + + G KL F KA A ++ PE N+ D ++++
Sbjct: 224 TNVMDLRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQFY-- 281
Query: 356 DVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKE 415
D+ +AV+TD GL P V D DKK F+E ++ LA KA++
Sbjct: 282 DIGIAVSTDDGLLVPFVRDCDKKN-------------------FAEIEQEIANLAVKARD 322
Query: 416 GKL 418
KL
Sbjct: 323 KKL 325
>sp|Q86AD5|Y1564_DICDI Pyruvate dehydrogenase complex subunit homolog DDB_G0271564,
mitochondrial OS=Dictyostelium discoideum GN=pdhX PE=3
SV=1
Length = 413
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 87/156 (55%), Gaps = 31/156 (19%)
Query: 280 FTDLPVSGVRGVIAKRLLQSKQ-----VIKLREQMNKALEKR-----GAKLSINDFIIKA 329
+ D+P + +R VIA +L QSKQ + + +++ L R K+S+NDF+++A
Sbjct: 129 YEDIPNNNIRRVIATKLSQSKQQVPHFYMTVECELDNVLAMRKSMPENVKISVNDFVLRA 188
Query: 330 TALASRRVPEANSSWQDTFIREYH--SVDVSVAVNTDKGLFTPIVFDADKKGLVDISNDS 387
ALA R P+ANS W D +VD+S AV+TD+GL TPI+ + DKK L+ ISN+S
Sbjct: 189 CALALRDNPQANSKWSDEHGEAILNPTVDISFAVSTDRGLITPIITNTDKKQLLAISNES 248
Query: 388 RSLISFRRPVKFSEESNDVKTLAAKAKEGKLQPHEF 423
K LA KA++GKL+P EF
Sbjct: 249 -------------------KQLALKARDGKLKPEEF 265
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 40 GGTVSISNLGMFGIKNFSAIINPPQACILAVGS 72
GGT S+SNLGMFGI +F+AIIN PQA ILA+G+
Sbjct: 267 GGTFSVSNLGMFGITSFNAIINYPQAGILAIGT 299
>sp|Q4L6C3|ODO2_STAHJ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=odhB PE=3 SV=1
Length = 423
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 40/324 (12%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + EEG L + L G
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEEGVLQEQLASEG 63
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
V +G+++ + E + ++ K+ D SA K A P
Sbjct: 64 DT-VEVGQVIATVGEGSGNASSSKEESSDQSQ----SANNDEATKELAQPTESQSNNE-- 116
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSI-GAGSGLFGSITSADLSKASKAG 263
+Q RV A+P A+R A E G+DLS++ G G+ + + KA+++
Sbjct: 117 ------ETQSNPNNQRVNATPSARRHARENGVDLSTVSGKGNDVVRKDDVENSQKAAQSQ 170
Query: 264 AVAAPSKSAKPTA-----NGPFTDLPVSGVRGVIAKRLLQ---------------SKQVI 303
+ SK +P N P +S + AK+LL+ V+
Sbjct: 171 SSQETSKKEEPKKSSGAPNKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVM 230
Query: 304 KLREQMNKAL--EKRGAKLSINDFIIKATALASRRVPEANSS--WQDTFIREYHSVDVSV 359
+LR++ + + G KL F KA A ++ PE N+ D ++Y+ D+ V
Sbjct: 231 ELRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQYY--DIGV 288
Query: 360 AVNTDKGLFTPIVFDADKKGLVDI 383
AV+TD GL P V D DKK ++
Sbjct: 289 AVSTDDGLLVPFVRDCDKKNFAEL 312
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucB PE=3 SV=1
Length = 409
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 150/364 (41%), Gaps = 83/364 (22%)
Query: 85 VALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPAG 144
+ +P L ++ T+ +W KK GD + +++ EIETDK + +G LA+++ G
Sbjct: 5 ILVPDLPESVADATVATWHKKLGDTVKRDEVIVEIETDKVVLEVPALSDGVLAEVVQAEG 64
Query: 145 SKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAPA 204
V L I E DV++ A+ A P
Sbjct: 65 ETVVSKQLLGKISTAQEGDVSS-------------ATLKATNEP---------------T 96
Query: 205 PSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSK------ 258
PS + + S SP+ +RL AE L I GSG+ G +T D+ +
Sbjct: 97 PSDRQNAAIENSHNHNADQSPVIRRLLAEHDLQADQI-QGSGVGGRLTREDIEREIAKRQ 155
Query: 259 --------ASKAGAVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSKQ--------- 301
A++ ++ + SA+ P T L R IA+RLL++K
Sbjct: 156 AQQVKQEAATEQNTISTVAYSARSEKRVPMTRL-----RKRIAERLLEAKNSTAMLTTFN 210
Query: 302 ------VIKLREQMNKALEKRGA-KLSINDFIIKATALASRRVPEANSSWQDTFIREYHS 354
++ LR+ + EK+ + +L F IKA A +R PE N+S + ++
Sbjct: 211 EVDMQPIMTLRKTYGEKFEKQHSVRLGFMSFYIKAVVEALKRYPEVNASIDGDDVVYHNY 270
Query: 355 VDVSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAK 414
D+S+AV+T +GL TP++ D DK + +I +K LA K +
Sbjct: 271 FDISIAVSTPRGLVTPVLRDCDKLSMAEI-------------------EKQIKALAEKGR 311
Query: 415 EGKL 418
+GKL
Sbjct: 312 DGKL 315
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 40 GGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQR 76
GG +I+N G+FG + IINPPQ+ IL + ++ +R
Sbjct: 322 GGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKER 358
>sp|Q9ZDY4|ODO2_RICPR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
prowazekii (strain Madrid E) GN=sucB PE=3 SV=1
Length = 401
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 147/353 (41%), Gaps = 67/353 (18%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
++ +P+L ++ TI W KK GD + +LL EIET+K T+ P G + KI
Sbjct: 4 KIIIPSLGESVTEATIAKWYKKLGDSVKTDELLLEIETEKVTLEVNAPCNGTIEKIAKTD 63
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G+ +V +G+ ++ + D A K A
Sbjct: 64 GA-NVTVGE----------EIGEINEVVD---------------TDTACTNNNSYKKQAI 97
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ K + + + A P ++L E LD ++I G+G G IT D+ +
Sbjct: 98 VQHDSEQIVDKPASSSNILA-PSVQKLVTENKLDPNNI-KGTGRGGRITKCDVLETINTT 155
Query: 264 AVAAPSKSAKPTANGPFTDLPVSGVRGVIAKRLLQSK---------------QVIKLREQ 308
V + + T + +S +R IA+RL S+ +VI LR Q
Sbjct: 156 PVTIETPALNKTNEERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 215
Query: 309 MNKALEKRG-AKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVDVSVAVNTDK 365
+ EK+ KL F +KAT A + +P N+ D + Y+ D+ VAV TD+
Sbjct: 216 YKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDLLYKNYY--DIGVAVGTDQ 273
Query: 366 GLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEGKL 418
GL P+V DADK G D+ E++ + LA KA+EGKL
Sbjct: 274 GLVVPVVRDADKMGFADV-----------------EQA--IGDLAKKAREGKL 307
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 40 GGTVSISNLGMFGIKNFSAIINPPQACILAVGSLSQRLV 78
GGT SISN G++G + IINPPQ+ IL + +R V
Sbjct: 314 GGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAV 352
>sp|Q8NWR7|ODO2_STAAW Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MW2) GN=odhB PE=3 SV=1
Length = 422
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 64/362 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + E G L++ L
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G V +G+ + II E + A+ ++ P +
Sbjct: 63 GDT-VEVGQAIAIIGEGSGN-------------ASKENSNDNTPQQNEETNNKKEETTNN 108
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ V R+ A+P A+R A E G++L+ + + + D+ K +A
Sbjct: 109 SVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTN--DVVRKEDIDKKQQAP 166
Query: 264 AVAAPSKSAKPTANGPFTDLP--------VSGVRGVIAKRLLQ---------------SK 300
A ++ A + P +S + AK+LL+
Sbjct: 167 ASTQTTQQASAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMT 226
Query: 301 QVIKLREQMNKALEKR--GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVD 356
V++LR++ + K G KL F KA+ A ++ PE N+ D ++Y+ D
Sbjct: 227 NVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYY--D 284
Query: 357 VSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEG 416
+ VAV+TD GL P V D DKK F+E ++ LA KA+E
Sbjct: 285 IGVAVSTDDGLLVPFVRDCDKKN-------------------FAEIEAEIANLAVKAREK 325
Query: 417 KL 418
KL
Sbjct: 326 KL 327
>sp|Q6G9E9|ODO2_STAAS Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MSSA476) GN=odhB PE=3 SV=1
Length = 422
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 64/362 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + E G L++ L
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G V +G+ + II E + A+ ++ P +
Sbjct: 63 GDT-VEVGQAIAIIGEGSGN-------------ASKENSNDNTPQQNEETNNKKEETTNN 108
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ V R+ A+P A+R A E G++L+ + + + D+ K +A
Sbjct: 109 SVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTN--DVVRKEDIDKKQQAP 166
Query: 264 AVAAPSKSAKPTANGPFTDLP--------VSGVRGVIAKRLLQ---------------SK 300
A ++ A + P +S + AK+LL+
Sbjct: 167 ASTQTTQQASAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMT 226
Query: 301 QVIKLREQMNKALEKR--GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVD 356
V++LR++ + K G KL F KA+ A ++ PE N+ D ++Y+ D
Sbjct: 227 NVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYY--D 284
Query: 357 VSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEG 416
+ VAV+TD GL P V D DKK F+E ++ LA KA+E
Sbjct: 285 IGVAVSTDDGLLVPFVRDCDKKN-------------------FAEIEAEIANLAVKAREK 325
Query: 417 KL 418
KL
Sbjct: 326 KL 327
>sp|Q5HG07|ODO2_STAAC Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain COL) GN=odhB PE=3 SV=1
Length = 422
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 64/362 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + E G L++ L
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G V +G+ + II E + A+ ++ P +
Sbjct: 63 GDT-VEVGQAIAIIGEGSGN-------------ASKENSNDNTPQQNEETNNKKEETTNN 108
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ V R+ A+P A+R A E G++L+ + + + D+ K +A
Sbjct: 109 SVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTN--DVVRKEDIDKKQQAP 166
Query: 264 AVAAPSKSAKPTANGPFTDLP--------VSGVRGVIAKRLLQ---------------SK 300
A ++ A + P +S + AK+LL+
Sbjct: 167 ASTQTTQQASAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMT 226
Query: 301 QVIKLREQMNKALEKR--GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVD 356
V++LR++ + K G KL F KA+ A ++ PE N+ D ++Y+ D
Sbjct: 227 NVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYY--D 284
Query: 357 VSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEG 416
+ VAV+TD GL P V D DKK F+E ++ LA KA+E
Sbjct: 285 IGVAVSTDDGLLVPFVRDCDKKN-------------------FAEIEAEIANLAVKAREK 325
Query: 417 KL 418
KL
Sbjct: 326 KL 327
>sp|Q2FYM2|ODO2_STAA8 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain NCTC 8325) GN=odhB PE=3 SV=1
Length = 422
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 64/362 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + E G L++ L
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G V +G+ + II E + A+ ++ P +
Sbjct: 63 GDT-VEVGQAIAIIGEGSGN-------------ASKENSNDNTPQQNEETNNKKEETTNN 108
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ V R+ A+P A+R A E G++L+ + + + D+ K +A
Sbjct: 109 SVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTN--DVVRKEDIDKKQQAP 166
Query: 264 AVAAPSKSAKPTANGPFTDLP--------VSGVRGVIAKRLLQ---------------SK 300
A ++ A + P +S + AK+LL+
Sbjct: 167 ASTQTTQQASAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMT 226
Query: 301 QVIKLREQMNKALEKR--GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVD 356
V++LR++ + K G KL F KA+ A ++ PE N+ D ++Y+ D
Sbjct: 227 NVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYY--D 284
Query: 357 VSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEG 416
+ VAV+TD GL P V D DKK F+E ++ LA KA+E
Sbjct: 285 IGVAVSTDDGLLVPFVRDCDKKN-------------------FAEIEAEIANLAVKAREK 325
Query: 417 KL 418
KL
Sbjct: 326 KL 327
>sp|Q2FH26|ODO2_STAA3 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain USA300) GN=odhB PE=3 SV=1
Length = 422
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 64/362 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + E G L++ L
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G V +G+ + II E + A+ ++ P +
Sbjct: 63 GDT-VEVGQAIAIIGEGSGN-------------ASKENSNDNTPQQNEETNNKKEETTNN 108
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ V R+ A+P A+R A E G++L+ + + + D+ K +A
Sbjct: 109 SVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTN--DVVRKEDIDKKQQAP 166
Query: 264 AVAAPSKSAKPTANGPFTDLP--------VSGVRGVIAKRLLQ---------------SK 300
A ++ A + P +S + AK+LL+
Sbjct: 167 ASTQTTQQASAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMT 226
Query: 301 QVIKLREQMNKALEKR--GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVD 356
V++LR++ + K G KL F KA+ A ++ PE N+ D ++Y+ D
Sbjct: 227 NVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYY--D 284
Query: 357 VSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEG 416
+ VAV+TD GL P V D DKK F+E ++ LA KA+E
Sbjct: 285 IGVAVSTDDGLLVPFVRDCDKKN-------------------FAEIEAEIANLAVKAREK 325
Query: 417 KL 418
KL
Sbjct: 326 KL 327
>sp|Q6GGZ6|ODO2_STAAR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MRSA252) GN=odhB PE=3 SV=1
Length = 423
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 147/362 (40%), Gaps = 63/362 (17%)
Query: 84 RVALPALSPTMEMGTIVSWAKKEGDKLNEGDLLAEIETDKATMGFETPEEGYLAKILVPA 143
V +P L+ ++ GTI W K GD + +G+ + E+ETDK + + E G L++ L
Sbjct: 3 EVKVPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 144 GSKDVPIGKLVCIIVENESDVAAFKDFKDDAPPAAGASAPAPPPPKVAAAPPPPPPKAAP 203
G V +G+ + +I E + A K+ +D P +
Sbjct: 63 GDT-VEVGQAIAVIGEGSGN--ASKENSNDNTPQQNDETTNNKKEETTN----------K 109
Query: 204 APSPTPVPSQKTSGGTRVYASPLAKRLAAEKGLDLSSIGAGSGLFGSITSADLSKASKAG 263
+ V RV A+P A+R A E G++L+ + + + D+ K +A
Sbjct: 110 SADKAEVNQTNDDNQQRVNATPSARRYARENGVNLAEVSPKTN--DVVRKEDIDKKQQAP 167
Query: 264 AVAAPSKSAKPTANGPFTDLP--------VSGVRGVIAKRLLQ---------------SK 300
A ++ A + P +S + AK+LL+
Sbjct: 168 ASTQTTQQAPAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMT 227
Query: 301 QVIKLREQMNKALEKR--GAKLSINDFIIKATALASRRVPEANSSWQ--DTFIREYHSVD 356
V++LR++ + K G KL F KA+ A ++ PE N+ D ++Y+ D
Sbjct: 228 NVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYY--D 285
Query: 357 VSVAVNTDKGLFTPIVFDADKKGLVDISNDSRSLISFRRPVKFSEESNDVKTLAAKAKEG 416
+ VAV+TD GL P V D DKK F+E ++ LA KA+E
Sbjct: 286 IGVAVSTDDGLLVPFVRDCDKKN-------------------FAEIEAEIANLAVKAREK 326
Query: 417 KL 418
KL
Sbjct: 327 KL 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,373,672
Number of Sequences: 539616
Number of extensions: 7827759
Number of successful extensions: 125300
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 1415
Number of HSP's that attempted gapping in prelim test: 63097
Number of HSP's gapped (non-prelim): 32979
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)