Query psy16143
Match_columns 388
No_of_seqs 331 out of 977
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 21:56:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16143.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16143hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3770|consensus 100.0 4.4E-43 9.6E-48 359.0 12.0 219 3-222 313-556 (577)
2 KOG3770|consensus 100.0 1.7E-28 3.7E-33 252.0 10.2 156 209-369 63-229 (577)
3 cd00842 MPP_ASMase acid sphing 99.9 6.2E-28 1.3E-32 235.0 12.0 124 3-126 167-296 (296)
4 cd00842 MPP_ASMase acid sphing 99.8 1E-18 2.2E-23 170.3 8.0 79 287-369 1-87 (296)
5 cd07395 MPP_CSTP1 Homo sapiens 99.5 4.3E-13 9.3E-18 128.4 14.2 121 4-134 124-254 (262)
6 cd07399 MPP_YvnB Bacillus subt 99.3 2.3E-11 5E-16 113.7 11.7 113 26-143 89-211 (214)
7 cd07396 MPP_Nbla03831 Homo sap 99.0 5.7E-09 1.2E-13 100.6 13.4 98 28-134 162-263 (267)
8 PRK11148 cyclic 3',5'-adenosin 98.9 4.8E-09 1E-13 101.5 10.1 128 4-146 120-263 (275)
9 TIGR03767 P_acnes_RR metalloph 98.9 9.4E-09 2E-13 105.7 11.7 122 3-132 299-431 (496)
10 cd07378 MPP_ACP5 Homo sapiens 98.9 1.7E-08 3.7E-13 97.1 11.8 88 3-94 118-216 (277)
11 cd07402 MPP_GpdQ Enterobacter 98.7 5.7E-08 1.2E-12 91.2 10.0 113 4-130 107-235 (240)
12 cd00839 MPP_PAPs purple acid p 98.7 1.5E-07 3.3E-12 91.2 12.7 84 5-94 117-208 (294)
13 TIGR03768 RPA4764 metallophosp 98.6 2.7E-07 5.8E-12 94.4 11.3 121 5-131 304-449 (492)
14 cd07401 MPP_TMEM62_N Homo sapi 98.4 6.8E-07 1.5E-11 85.9 7.5 86 4-93 122-212 (256)
15 PTZ00422 glideosome-associated 98.3 7.7E-06 1.7E-10 83.0 13.2 84 6-93 175-262 (394)
16 PLN02533 probable purple acid 98.1 5.3E-05 1.2E-09 78.1 13.6 64 28-93 265-336 (427)
17 KOG2679|consensus 97.8 0.00015 3.2E-09 69.6 10.4 99 29-136 194-301 (336)
18 TIGR03729 acc_ester putative p 97.7 2.8E-05 6.1E-10 73.6 4.6 61 28-92 149-222 (239)
19 cd07383 MPP_Dcr2 Saccharomyces 97.6 0.00011 2.4E-09 67.5 5.6 67 28-95 94-180 (199)
20 cd07393 MPP_DR1119 Deinococcus 97.5 0.00034 7.4E-09 66.1 8.2 62 29-95 146-209 (232)
21 PF00149 Metallophos: Calcineu 97.4 0.00024 5.2E-09 59.9 5.0 60 29-90 133-199 (200)
22 KOG1378|consensus 97.1 0.0015 3.3E-08 67.1 8.2 82 5-93 256-346 (452)
23 cd07392 MPP_PAE1087 Pyrobaculu 96.9 0.0012 2.5E-08 59.1 4.5 60 28-92 109-174 (188)
24 COG1409 Icc Predicted phosphoh 96.7 0.011 2.4E-07 56.2 10.0 84 5-91 104-193 (301)
25 cd08163 MPP_Cdc1 Saccharomyces 95.5 0.031 6.6E-07 54.0 6.4 86 4-98 124-234 (257)
26 cd07400 MPP_YydB Bacillus subt 95.5 0.032 7E-07 48.0 5.9 46 49-96 81-130 (144)
27 cd07404 MPP_MS158 Microscilla 94.5 0.043 9.3E-07 48.6 4.0 57 29-93 86-151 (166)
28 cd07388 MPP_Tt1561 Thermus the 94.2 0.1 2.2E-06 49.5 6.0 56 32-89 132-189 (224)
29 COG1768 Predicted phosphohydro 93.6 0.1 2.2E-06 47.7 4.6 46 42-92 155-200 (230)
30 PF00149 Metallophos: Calcineu 91.5 0.25 5.4E-06 41.2 4.1 17 285-301 1-17 (200)
31 cd07402 MPP_GpdQ Enterobacter 90.6 0.4 8.7E-06 44.7 4.9 28 336-363 20-53 (240)
32 PF12850 Metallophos_2: Calcin 89.9 1.4 3E-05 37.8 7.4 74 46-132 81-155 (156)
33 cd07383 MPP_Dcr2 Saccharomyces 89.8 0.37 8E-06 44.0 3.9 14 284-297 2-15 (199)
34 cd07403 MPP_TTHA0053 Thermus t 89.6 0.51 1.1E-05 40.4 4.4 43 49-93 59-105 (129)
35 PF09423 PhoD: PhoD-like phosp 89.1 2.3 5.1E-05 44.1 9.6 110 29-140 301-444 (453)
36 PRK11148 cyclic 3',5'-adenosin 87.2 1.3 2.8E-05 42.7 5.9 15 281-295 11-25 (275)
37 cd00840 MPP_Mre11_N Mre11 nucl 86.8 0.78 1.7E-05 41.9 4.0 27 337-363 24-54 (223)
38 cd00838 MPP_superfamily metall 86.6 0.77 1.7E-05 37.2 3.5 56 38-95 51-119 (131)
39 cd07379 MPP_239FB Homo sapiens 86.2 0.85 1.8E-05 38.9 3.7 44 47-92 69-117 (135)
40 KOG1432|consensus 86.2 2.7 5.9E-05 42.2 7.5 103 29-136 229-354 (379)
41 cd07407 MPP_YHR202W_N Saccharo 85.1 2.8 6.1E-05 41.0 7.1 65 25-94 168-234 (282)
42 KOG1432|consensus 84.9 1.2 2.5E-05 44.7 4.3 23 282-308 51-73 (379)
43 cd00841 MPP_YfcE Escherichia c 83.6 7.3 0.00016 33.7 8.5 73 46-132 75-148 (155)
44 cd07395 MPP_CSTP1 Homo sapiens 83.4 2 4.3E-05 40.9 5.2 57 283-366 3-65 (262)
45 COG1409 Icc Predicted phosphoh 80.8 2.1 4.6E-05 40.4 4.3 13 285-297 1-13 (301)
46 PRK11340 phosphodiesterase Yae 80.5 3.1 6.7E-05 40.2 5.4 16 283-298 48-63 (271)
47 cd07385 MPP_YkuE_C Bacillus su 80.3 2.8 6.1E-05 38.5 4.8 15 285-299 2-16 (223)
48 COG0622 Predicted phosphoester 80.0 5.1 0.00011 36.4 6.3 55 80-142 110-165 (172)
49 cd07394 MPP_Vps29 Homo sapiens 78.0 13 0.00029 33.6 8.4 47 80-134 107-158 (178)
50 COG2129 Predicted phosphoester 77.5 12 0.00026 35.5 8.0 71 49-133 141-217 (226)
51 TIGR00040 yfcE phosphoesterase 76.9 20 0.00044 31.2 9.1 47 80-134 107-154 (158)
52 cd07410 MPP_CpdB_N Escherichia 74.9 6.3 0.00014 37.9 5.7 65 25-92 166-231 (277)
53 TIGR00619 sbcd exonuclease Sbc 71.9 4.1 8.9E-05 39.0 3.6 14 285-298 1-14 (253)
54 PF12850 Metallophos_2: Calcin 68.2 7.3 0.00016 33.2 4.1 13 285-297 1-13 (156)
55 cd07385 MPP_YkuE_C Bacillus su 66.8 4.2 9.2E-05 37.3 2.4 56 26-96 116-171 (223)
56 cd07401 MPP_TMEM62_N Homo sapi 65.8 7.2 0.00016 37.3 3.9 12 287-298 2-13 (256)
57 PRK11340 phosphodiesterase Yae 65.6 5.9 0.00013 38.3 3.2 38 45-96 182-219 (271)
58 TIGR00583 mre11 DNA repair pro 63.4 11 0.00023 39.0 4.8 47 283-360 2-51 (405)
59 cd07397 MPP_DevT Myxococcus xa 61.7 15 0.00032 35.2 5.1 91 26-118 128-236 (238)
60 cd08165 MPP_MPPE1 human MPPE1 58.3 15 0.00032 32.4 4.2 35 73-116 118-152 (156)
61 COG2730 BglC Endoglucanase [Ca 58.0 30 0.00065 35.5 7.0 50 29-78 113-178 (407)
62 KOG4419|consensus 53.9 15 0.00032 39.6 3.9 64 28-96 211-274 (602)
63 PF00150 Cellulase: Cellulase 51.7 60 0.0013 30.4 7.6 31 28-58 58-88 (281)
64 PRK05340 UDP-2,3-diacylglucosa 50.8 27 0.00059 32.8 5.0 62 67-140 177-238 (241)
65 cd07409 MPP_CD73_N CD73 ecto-5 50.5 46 0.001 32.2 6.6 53 29-92 166-219 (281)
66 TIGR01854 lipid_A_lpxH UDP-2,3 49.4 23 0.00051 33.1 4.3 26 69-96 177-202 (231)
67 smart00854 PGA_cap Bacterial c 46.4 55 0.0012 30.7 6.3 56 34-92 162-218 (239)
68 cd07381 MPP_CapA CapA and rela 45.4 71 0.0015 29.9 6.9 59 32-93 162-221 (239)
69 PF14582 Metallophos_3: Metall 41.3 16 0.00035 34.9 1.7 63 27-93 157-220 (255)
70 PF09587 PGA_cap: Bacterial ca 39.9 1E+02 0.0022 29.1 7.1 63 29-94 168-231 (250)
71 PF14417 MEDS: MEDS: MEthanoge 39.4 1.2E+02 0.0026 27.5 7.2 61 17-77 90-154 (191)
72 cd08166 MPP_Cdc1_like_1 unchar 39.2 34 0.00073 31.8 3.5 41 49-96 112-152 (195)
73 cd07406 MPP_CG11883_N Drosophi 39.2 66 0.0014 30.6 5.7 51 32-93 158-209 (257)
74 cd07400 MPP_YydB Bacillus subt 38.8 15 0.00032 31.2 1.0 12 287-298 1-12 (144)
75 cd07425 MPP_Shelphs Shewanella 38.3 39 0.00085 31.3 3.8 25 69-95 159-183 (208)
76 PRK09419 bifunctional 2',3'-cy 35.3 55 0.0012 38.4 5.2 63 25-91 217-280 (1163)
77 PRK09453 phosphodiesterase; Pr 35.0 89 0.0019 27.9 5.5 50 80-139 119-169 (182)
78 cd07412 MPP_YhcR_N Bacillus su 34.4 86 0.0019 30.4 5.7 62 31-92 177-242 (288)
79 cd00845 MPP_UshA_N_like Escher 33.9 2.7E+02 0.0059 25.8 9.0 44 39-93 165-208 (252)
80 PF01784 NIF3: NIF3 (NGG1p int 33.0 55 0.0012 31.0 4.0 53 36-93 44-101 (241)
81 PF14488 DUF4434: Domain of un 33.0 36 0.00078 30.6 2.6 27 30-56 63-89 (166)
82 PRK10799 metal-binding protein 32.8 58 0.0013 31.1 4.1 53 36-93 47-103 (247)
83 cd00840 MPP_Mre11_N Mre11 nucl 32.4 24 0.00051 32.0 1.3 62 30-94 142-204 (223)
84 PHA02546 47 endonuclease subun 31.5 25 0.00055 35.1 1.5 14 285-298 1-14 (340)
85 cd07384 MPP_Cdc1_like Saccharo 31.5 70 0.0015 28.6 4.2 33 80-116 135-167 (171)
86 cd02960 AGR Anterior Gradient 31.4 39 0.00085 29.3 2.4 25 29-53 4-31 (130)
87 KOG3325|consensus 31.3 1.8E+02 0.0039 26.2 6.5 87 47-140 73-164 (183)
88 cd08162 MPP_PhoA_N Synechococc 29.9 98 0.0021 30.7 5.3 45 38-92 200-245 (313)
89 cd07411 MPP_SoxB_N Thermus the 29.4 1.1E+02 0.0025 29.0 5.6 52 31-93 168-221 (264)
90 TIGR03729 acc_ester putative p 29.1 27 0.00058 32.8 1.1 11 286-296 1-11 (239)
91 COG0737 UshA 5'-nucleotidase/2 27.8 55 0.0012 34.6 3.3 59 29-90 187-246 (517)
92 cd07405 MPP_UshA_N Escherichia 26.8 1.2E+02 0.0026 29.5 5.2 48 45-92 174-222 (285)
93 COG0420 SbcD DNA repair exonuc 26.6 32 0.0007 34.8 1.3 12 285-296 1-12 (390)
94 PRK09419 bifunctional 2',3'-cy 26.2 1.2E+02 0.0026 35.7 5.9 57 33-92 825-883 (1163)
95 PRK09418 bifunctional 2',3'-cy 25.5 1.1E+02 0.0024 34.4 5.3 63 25-92 227-290 (780)
96 PRK10966 exonuclease subunit S 24.7 42 0.00091 34.6 1.7 14 285-298 1-14 (407)
97 PRK10425 DNase TatD; Provision 24.2 1.5E+02 0.0032 28.5 5.3 41 26-76 102-142 (258)
98 cd07390 MPP_AQ1575 Aquifex aeo 24.0 97 0.0021 27.3 3.7 14 81-94 127-140 (168)
99 COG3540 PhoD Phosphodiesterase 23.9 47 0.001 35.0 1.9 87 29-117 340-446 (522)
100 COG1408 Predicted phosphohydro 23.5 45 0.00097 32.7 1.6 19 281-299 41-59 (284)
101 PRK08099 bifunctional DNA-bind 23.5 1.5E+02 0.0034 30.4 5.6 62 23-89 104-169 (399)
102 cd07398 MPP_YbbF-LpxH Escheric 23.0 97 0.0021 28.0 3.6 16 80-95 190-205 (217)
103 cd07408 MPP_SA0022_N Staphyloc 22.8 1.9E+02 0.0041 27.4 5.7 83 46-142 173-255 (257)
104 cd01828 sialate_O-acetylestera 22.7 3.6E+02 0.0078 23.1 7.1 52 25-76 65-119 (169)
105 PRK05340 UDP-2,3-diacylglucosa 22.0 49 0.0011 31.1 1.4 14 285-298 1-14 (241)
106 PF14157 YmzC: YmzC-like prote 21.8 1.2E+02 0.0025 23.1 3.1 38 109-146 18-62 (63)
107 cd01822 Lysophospholipase_L1_l 21.8 5E+02 0.011 22.1 8.0 48 26-76 82-130 (177)
108 cd07382 MPP_DR1281 Deinococcus 21.7 4.4E+02 0.0095 25.4 8.0 55 24-91 123-178 (255)
109 PRK09420 cpdB bifunctional 2', 21.0 1.8E+02 0.0039 32.0 5.7 61 26-91 202-263 (649)
110 TIGR00486 YbgI_SA1388 dinuclea 20.6 1.8E+02 0.004 27.6 5.1 54 36-94 48-105 (249)
No 1
>KOG3770|consensus
Probab=100.00 E-value=4.4e-43 Score=359.01 Aligned_cols=219 Identities=35% Similarity=0.613 Sum_probs=201.5
Q ss_pred CCCeEEEEEecc---cceEEEecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccc
Q psy16143 3 EQDLKLLFWENH---LVVKWNVLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYT 79 (388)
Q Consensus 3 ~~~lr~i~~~t~---~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~ 79 (388)
.-|||+|++|++ ..|||++.+.+||.+||+||..||++||.+|++|+|+||||||..+|...|+..|.+++.||+++
T Consensus 313 ~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~GekVhil~HIPpG~~~c~~~ws~~f~~iv~r~~~t 392 (577)
T KOG3770|consen 313 IDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAGEKVHILGHIPPGDGVCLEGWSINFYRIVNRFRST 392 (577)
T ss_pred cCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcCCEEEEEEeeCCCCcchhhhhhHHHHHHHHHHHHh
Confidence 479999999987 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCCCceEEEEEe-CCeeEEeeEEEEeeccccccCC-CCCc
Q psy16143 80 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVA-RGTWEVTDFDSYTYNISSIVND-SEPD 157 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~NP~fRvy~~d-~~t~~v~d~~~Y~~dL~~an~~-~~~~ 157 (388)
|+||||||+|.|+|+++|+... ++|+++++++||+|++.+.||+||+|.+| ..++.+.|+.+|++||++||.+ +.|.
T Consensus 393 I~gqf~GH~h~d~f~v~yde~~-~~p~~v~~i~~svtty~~~~p~yr~y~~~~~~~~~~~d~~ty~~Nlt~an~~~e~p~ 471 (577)
T KOG3770|consen 393 IAGQFYGHTHIDEFRVFYDEET-GHPIAVAYIGPSVTTYYNKNPGYRIYAVDSTISFSVPDHRTYFYNLTSANLQPESPE 471 (577)
T ss_pred hhhhccccCcceeEEEEecccc-CCceeeeeccccceehhccCCCceecccCcccceecccceEEEEehhhhcCCCCCCc
Confidence 9999999999999999999875 69999999999999999999999999999 5669999999999999999988 8999
Q ss_pred eeeeeeeccccCCCCCChhccch-------h------hhc----CCC---CCCCchhhcccceecceecccccccccccc
Q psy16143 158 WIKLYSFKEEYGLESTRPEEISN-------N------HLK----GSN---KEHYDEKRKTKILCDIMTSEVADSTHCNLL 217 (388)
Q Consensus 158 W~~eY~~~~~Y~~~dlsp~s~~~-------d------~~~----~~~---~~~C~~~C~~~~lC~i~s~~~~d~~~C~~l 217 (388)
|+++|+..++|++.++||.+|++ | ++| +.. ...|+..|+...+|.++++...++..|..+
T Consensus 472 W~~~y~~~~~y~~~d~sp~~i~~~~~~~~~d~~lfrk~~~~~~~~~~~~~~~~cd~~C~~~~ic~~~~~~~~~~~~C~~l 551 (577)
T KOG3770|consen 472 WELLYTAFEAYGMQDQSPFSIDKLLDRMKTDTKLFRKYKRYPSRNMPPEIVYQCDTACYMQSICDTRSGIGYARTLCPEL 551 (577)
T ss_pred hHhhhhhhhhhCcccCCchhhhhHhhhhccCHHHHhhceecCCCCCChhhccccchhhHHHhhhhhhhhcchhhhhhHHh
Confidence 99999999999999999999998 2 333 222 257999999999999999999999889887
Q ss_pred cchhh
Q psy16143 218 KKDVL 222 (388)
Q Consensus 218 ~~~~~ 222 (388)
..++.
T Consensus 552 ~~~~~ 556 (577)
T KOG3770|consen 552 EPDLN 556 (577)
T ss_pred ccccC
Confidence 55443
No 2
>KOG3770|consensus
Probab=99.95 E-value=1.7e-28 Score=251.96 Aligned_cols=156 Identities=28% Similarity=0.558 Sum_probs=126.8
Q ss_pred ccccccccccc----hhhhhccccCCCCCccceeecccccCCCCCCCCCC-cceeeeccCCCccCCCCCCCccccCCCCC
Q psy16143 209 ADSTHCNLLKK----DVLFDLKDQGIPLTPERVCGTVLENSNCSVKNGPQ-VDWQVDTNYGTKVDRITAPSESRYLASGD 283 (388)
Q Consensus 209 ~d~~~C~~l~~----~~~~~L~~~~~~~~~~~~C~~~~~~~~C~~~~~p~-~~w~v~~~~~~k~~~~~~p~~~~~~~~~~ 283 (388)
....+|..++. +|+++++. ...++..+||.+++ +.|+....|. .+|+++++.++|++.. |+.+.|.++..
T Consensus 63 ~~~~vc~~~~~~f~~~f~~v~~r--~~~~~~~icg~~l~-~~c~~~~~~~~~~w~~~l~~~~~~p~~--p~~~~p~~~~p 137 (577)
T KOG3770|consen 63 EPTPVCTWIIDEFNDEFFDVFVR--SANSPEEICGHFLP-DTCGDIVDPLENNWNLTLPGPPKPPRL--PKLPLPLKNNP 137 (577)
T ss_pred cCcchhhHHHHHHHHHHHHHHHH--HhcCHHHHhhcccC-CccccccchhhhcceeeccCCCCCCCC--CCCCCCCCCCC
Confidence 35557887754 66677763 44566999999997 6899987754 4699999976776543 22233355678
Q ss_pred ceeEEEecccCCCCCcCCCCCcCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh-----ccEEEe
Q psy16143 284 EISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKK-----HKIFWL 358 (388)
Q Consensus 284 ~~~vlhisD~H~D~~Y~~g~~~~C~~~~CCr~~~~~~~~~~~~Ag~~G~y~~CD~P~~l~~s~~~~i~~-----~~~~wt 358 (388)
++|||||||+|+|+.|++|++++|..|+|||..++.+.....+||+||+|+.||+|++||++||++||+ ++|+||
T Consensus 138 ~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~iD~I~wT 217 (577)
T KOG3770|consen 138 TFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDIDYIIWT 217 (577)
T ss_pred ceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 999999999999999999999999999999998777665566999999999999999999999999998 379999
Q ss_pred cc-CCCCCCCCC
Q psy16143 359 SE-KGHAKGNGA 369 (388)
Q Consensus 359 gd-~~h~~~~~~ 369 (388)
|| ++|+.|...
T Consensus 218 GD~~~H~~w~~t 229 (577)
T KOG3770|consen 218 GDNVAHDVWAQT 229 (577)
T ss_pred CCCCcccchhhh
Confidence 99 999976643
No 3
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.95 E-value=6.2e-28 Score=235.00 Aligned_cols=124 Identities=39% Similarity=0.688 Sum_probs=110.7
Q ss_pred CCCeEEEEEecccc---eEEEe-cCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCch--HHHHHHHHHHHHhh
Q psy16143 3 EQDLKLLFWENHLV---VKWNV-LYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTM--QVFQREYRKIINRF 76 (388)
Q Consensus 3 ~~~lr~i~~~t~~~---N~~~~-~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~--~~~~~~y~~iv~ry 76 (388)
..+||||+|||+.+ |.|.. .+..||.+||+||+++|++|++++++|+|+|||||+..... ..|.++|.+|++||
T Consensus 167 ~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~~~v~I~~HiPp~~~~~~~~~~~~~~~~~ii~~y 246 (296)
T cd00842 167 KPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAGEKVWIIGHIPPGVNSYDTLENWSERYLQIINRY 246 (296)
T ss_pred CCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCCCeEEEEeccCCCCcccccchHHHHHHHHHHHHH
Confidence 57999999999854 33443 46789999999999999999999999999999999986544 47999999999999
Q ss_pred ccceeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCCCceE
Q psy16143 77 EYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPNYR 126 (388)
Q Consensus 77 ~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~NP~fR 126 (388)
+++|+++|+||+|.|+|+++++..+.++++.+++++|||||++++|||||
T Consensus 247 ~~~i~~~~~GH~H~d~~~~~~~~~~~~~~~~~~~~~psitp~~~~nP~~r 296 (296)
T cd00842 247 SDTIAGQFFGHTHRDEFRVFYDDNDTGEPINVALIAPSVTPYSGNNPGFR 296 (296)
T ss_pred HHhhheeeecccccceEEEEeCCCCCCCceEEEEecCccCcCCCCCCCCC
Confidence 99999999999999999999987655578999999999999999999998
No 4
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.76 E-value=1e-18 Score=170.25 Aligned_cols=79 Identities=39% Similarity=0.818 Sum_probs=70.7
Q ss_pred EEEecccCCCCCcCCCCC--cCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh-----ccEEEec
Q psy16143 287 IIQLTDIHYDPKYLAGKT--AHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKK-----HKIFWLS 359 (388)
Q Consensus 287 vlhisD~H~D~~Y~~g~~--~~C~~~~CCr~~~~~~~~~~~~Ag~~G~y~~CD~P~~l~~s~~~~i~~-----~~~~wtg 359 (388)
||||||||+|+.|.+|++ +.|.++.|||..+. ....+||+||+| .||+|+.|+++++++|++ +||+|||
T Consensus 1 ~l~~sDiH~D~~Y~~~~~~~~~C~~~~~~~~~~~---~~~~~~~~~G~~-~CD~p~~l~~s~l~~i~~~~~~~dfii~tG 76 (296)
T cd00842 1 FLHISDIHYDPLYKVGSEYSANCHSPLCCRDESG---DISPPAGPWGDY-GCDSPWRLVESALEAIKKNHPKPDFILWTG 76 (296)
T ss_pred CEEeeccCCCCCCcCCCCCcCCCCCCCccCCCCC---CCCCCCCCCcCc-CCCCcHHHHHHHHHHHHHhCCCCCEEEEcC
Confidence 799999999999999999 99999999998762 234689999999 699999999999999987 4799999
Q ss_pred c-CCCCCCCCC
Q psy16143 360 E-KGHAKGNGA 369 (388)
Q Consensus 360 d-~~h~~~~~~ 369 (388)
| +.|+.+...
T Consensus 77 D~v~h~~~~~~ 87 (296)
T cd00842 77 DLVRHDVDEQT 87 (296)
T ss_pred CCCCCCchhhc
Confidence 9 999987644
No 5
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.49 E-value=4.3e-13 Score=128.38 Aligned_cols=121 Identities=18% Similarity=0.225 Sum_probs=86.8
Q ss_pred CCeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHH-HCCCeEEEEEccCCCCCCc--------h-HHHHHHHHHHH
Q psy16143 4 QDLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAE-KSNEKVHILSHIPPGSEDT--------M-QVFQREYRKII 73 (388)
Q Consensus 4 ~~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~-~~~~kV~IigHiPpg~~d~--------~-~~~~~~y~~iv 73 (388)
.++|+|++|+..+.-..- ....+..||+||+++|++++ +++++++|++|+||..... . ..-..++.+++
T Consensus 124 ~~~~~i~lds~~~~~~~~-~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll 202 (262)
T cd07395 124 GGVFFIVLNSQLFFDPSE-VPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKF 202 (262)
T ss_pred CCEEEEEeccccccCccc-cccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHH
Confidence 368999999874321111 12356799999999999996 4467999999999975321 1 22356799999
Q ss_pred HhhccceeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCCCceEEEEEeCCe
Q psy16143 74 NRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVARGT 134 (388)
Q Consensus 74 ~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~NP~fRvy~~d~~t 134 (388)
++|. |.++|+||+|.+....+ . + +.....+++..++...+||||+++++++.
T Consensus 203 ~~~~--V~~v~~GH~H~~~~~~~-~--g----~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 203 KKAG--VKAVFSGHYHRNAGGRY-G--G----LEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HhcC--ceEEEECccccCCceEE-C--C----EEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 9995 89999999999988643 2 2 22223333334777889999999999875
No 6
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.29 E-value=2.3e-11 Score=113.70 Aligned_cols=113 Identities=15% Similarity=0.208 Sum_probs=85.0
Q ss_pred ChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCC-c---h------HHHHHHHHHHHHhhccceeEEEeecccCCceee
Q psy16143 26 DPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSED-T---M------QVFQREYRKIINRFEYTIAAEFNGHTHYEDITI 95 (388)
Q Consensus 26 DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d-~---~------~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i 95 (388)
.+..||+||+++|+++ ++++|+|++|+|+.... . . ..-.+.+.+|+++|.. |.+.|+||.|....+.
T Consensus 89 ~~~~ql~WL~~~L~~~--~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 89 PRDEVLQWANEVLKKH--PDRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDN-VFMVLSGHVHGAGRTT 165 (214)
T ss_pred CCHHHHHHHHHHHHHC--CCCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCC-EEEEEccccCCCceEE
Confidence 3579999999999865 36799999999997632 1 1 1223468899999974 7889999999998876
Q ss_pred eecCCCCCccceeeeecccccccCCCCCceEEEEEeCCeeEEeeEEEE
Q psy16143 96 FYDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVARGTWEVTDFDSY 143 (388)
Q Consensus 96 ~~~~~~~~~~~~~~~~~Psvtp~~~~NP~fRvy~~d~~t~~v~d~~~Y 143 (388)
..+.+..++++..++..+...+..+ ||.||++++|.+.. .+++.||
T Consensus 166 ~~~~~~~g~~v~~~~~~~q~~~~~g-~~~~r~~~f~~~~~-~i~~~ty 211 (214)
T cd07399 166 LVSVGDAGRTVHQMLADYQGEPNGG-NGFLRLLEFDPDNN-KIDVRTY 211 (214)
T ss_pred EcccCCCCCEeeEEeecccCCCCCC-cceEEEEEEecCCC-EEEEEeC
Confidence 6333322367766777777777644 99999999998854 6777776
No 7
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.99 E-value=5.7e-09 Score=100.58 Aligned_cols=98 Identities=22% Similarity=0.320 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCC---chHHH-HHHHHHHHHhhccceeEEEeecccCCceeeeecCCCCC
Q psy16143 28 NDQLSWLASTLLEAEKSNEKVHILSHIPPGSED---TMQVF-QREYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSS 103 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d---~~~~~-~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~ 103 (388)
..|++||+++|+++++++.+|+|++|+|+.... ....| .+++.+++++|. .|.+.|+||+|.+.... ..|
T Consensus 162 ~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~ll~~~~-~V~~v~~GH~H~~~~~~---~~g-- 235 (267)
T cd07396 162 EEQLQWLRNELQEADANGEKVIIFSHFPLHPESTSPHGLLWNHEEVLSILRAYG-CVKACISGHDHEGGYAQ---RHG-- 235 (267)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCCccccccCHHHHHHHHHhCC-CEEEEEcCCcCCCCccc---cCC--
Confidence 589999999999998888999999999986532 22233 467899999986 47899999999998643 112
Q ss_pred ccceeeeecccccccCCCCCceEEEEEeCCe
Q psy16143 104 RATNVAYNGGSITSYYNVNPNYRLYKVARGT 134 (388)
Q Consensus 104 ~~~~~~~~~Psvtp~~~~NP~fRvy~~d~~t 134 (388)
...+++||+.-...+-|.|.++++-.+.
T Consensus 236 ---i~~~~~~a~~~~~~~~~~~~~~~~~~~~ 263 (267)
T cd07396 236 ---IHFLTLEGMVETPPESNAFGVVIVYEDR 263 (267)
T ss_pred ---eeEEEechhhcCCCCCCceEEEEEeCCc
Confidence 4456778777544456888888876664
No 8
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.92 E-value=4.8e-09 Score=101.51 Aligned_cols=128 Identities=17% Similarity=0.189 Sum_probs=79.9
Q ss_pred CCeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc-----hHH-HHHHHHHHHHhhc
Q psy16143 4 QDLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT-----MQV-FQREYRKIINRFE 77 (388)
Q Consensus 4 ~~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~-----~~~-~~~~y~~iv~ry~ 77 (388)
.++++|++++..... ....-...||+||+++|++++ +++++|+.||||..... ... -.++|.+++++|.
T Consensus 120 ~~~~~i~Lds~~~g~---~~G~l~~~ql~wL~~~L~~~~--~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~ 194 (275)
T PRK11148 120 EHWQILLLDSQVFGV---PHGELSEYQLEWLERKLADAP--ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFP 194 (275)
T ss_pred CCEEEEEecCCCCCC---cCCEeCHHHHHHHHHHHhhCC--CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCC
Confidence 356788888763321 111123589999999999874 45778888887754211 111 2357999999995
Q ss_pred cceeEEEeecccCCceeeeecCCCCCccceeeeecccccc----c------CCCCCceEEEEEeCCeeEEeeEEEEeec
Q psy16143 78 YTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITS----Y------YNVNPNYRLYKVARGTWEVTDFDSYTYN 146 (388)
Q Consensus 78 ~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp----~------~~~NP~fRvy~~d~~t~~v~d~~~Y~~d 146 (388)
. |+++|+||+|.+..... .+ ...+++||+.. . ....||||+++++++ +.+.....+..+
T Consensus 195 ~-v~~vl~GH~H~~~~~~~---~g-----i~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~-g~~~~~~~~~~~ 263 (275)
T PRK11148 195 N-VKAILCGHIHQELDLDW---NG-----RRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHAD-GSLETEVHRLAD 263 (275)
T ss_pred C-ceEEEecccChHHhceE---CC-----EEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCC-CcEEEEEEEcCC
Confidence 4 78999999999744211 11 22445666552 1 134589999999754 345444444433
No 9
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=98.90 E-value=9.4e-09 Score=105.75 Aligned_cols=122 Identities=17% Similarity=0.130 Sum_probs=80.4
Q ss_pred CCCeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc-----h-H----HHHHHHHHH
Q psy16143 3 EQDLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT-----M-Q----VFQREYRKI 72 (388)
Q Consensus 3 ~~~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~-----~-~----~~~~~y~~i 72 (388)
+.++|+|+||++..+ -.....=...||+||+++|+++ ++++|+|++||||..... . + .-.+++.++
T Consensus 299 ~ggvrfIvLDSt~~~--G~~~G~L~eeQL~WLeqeLa~a--~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n~~eLldL 374 (496)
T TIGR03767 299 AGGVRGISMDTTNRA--GGDEGSLGQTQFKWIKDTLRAS--SDTLFVLFSHHTSWSMVNELTDPVDPGEKRHLGTELVSL 374 (496)
T ss_pred ECCEEEEEEeCCCcC--CCcCCccCHHHHHHHHHHHhcC--CCCCEEEEECCCCccccccccccccccccccCHHHHHHH
Confidence 567999999998431 0111122368999999999975 467899999999865211 1 0 113579999
Q ss_pred HHhhccceeEEEeecccCCceeeeecCCCC-CccceeeeecccccccCCCCCceEEEEEeC
Q psy16143 73 INRFEYTIAAEFNGHTHYEDITIFYDKNNS-SRATNVAYNGGSITSYYNVNPNYRLYKVAR 132 (388)
Q Consensus 73 v~ry~~~I~~~ffGH~H~D~f~i~~~~~~~-~~~~~~~~~~Psvtp~~~~NP~fRvy~~d~ 132 (388)
+++|.+ |.++|+||+|.+.+.-..+..+. ...-.+-..+.|+.-+- =-|||+|+-.
T Consensus 375 L~~ypn-V~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvdfP---q~~Ri~Ei~~ 431 (496)
T TIGR03767 375 LLEHPN-VLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHIDFP---QQGRIIELAD 431 (496)
T ss_pred HhcCCC-ceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccccCC---CCceEEEEEe
Confidence 999975 67899999999987533322220 01124456677776532 3478888753
No 10
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=98.87 E-value=1.7e-08 Score=97.10 Aligned_cols=88 Identities=15% Similarity=0.266 Sum_probs=65.5
Q ss_pred CCCeEEEEEecccce--EEE------ecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc---hHHHHHHHHH
Q psy16143 3 EQDLKLLFWENHLVV--KWN------VLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT---MQVFQREYRK 71 (388)
Q Consensus 3 ~~~lr~i~~~t~~~N--~~~------~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~---~~~~~~~y~~ 71 (388)
..++|+|+|||..+. +.. .........|++||+++|+++++ +.++|++|+|+..... .....+++.+
T Consensus 118 ~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~~--~~~iv~~H~P~~~~~~~~~~~~~~~~l~~ 195 (277)
T cd07378 118 DTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAASTA--DWKIVVGHHPIYSSGEHGPTSCLVDRLLP 195 (277)
T ss_pred CCEEEEEEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHhcCC--CeEEEEeCccceeCCCCCCcHHHHHHHHH
Confidence 457999999998542 110 01123456899999999998875 7899999999976321 1344678999
Q ss_pred HHHhhccceeEEEeecccCCcee
Q psy16143 72 IINRFEYTIAAEFNGHTHYEDIT 94 (388)
Q Consensus 72 iv~ry~~~I~~~ffGH~H~D~f~ 94 (388)
++++|. |...|+||+|..+..
T Consensus 196 l~~~~~--v~~vl~GH~H~~~~~ 216 (277)
T cd07378 196 LLKKYK--VDAYLSGHDHNLQHI 216 (277)
T ss_pred HHHHcC--CCEEEeCCcccceee
Confidence 999997 789999999997653
No 11
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.73 E-value=5.7e-08 Score=91.20 Aligned_cols=113 Identities=19% Similarity=0.247 Sum_probs=76.5
Q ss_pred CCeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc--hHH----HHHHHHHHHHhhc
Q psy16143 4 QDLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT--MQV----FQREYRKIINRFE 77 (388)
Q Consensus 4 ~~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~--~~~----~~~~y~~iv~ry~ 77 (388)
.++|+|++++...+. ....-...|++||+++|++++ +++++|++|+||..... ... -.+++.+++.+|.
T Consensus 107 ~~~~~i~lds~~~~~---~~~~~~~~ql~wL~~~L~~~~--~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~ 181 (240)
T cd07402 107 GGWRLILLDSSVPGQ---HGGELCAAQLDWLEAALAEAP--DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHP 181 (240)
T ss_pred CCEEEEEEeCCCCCC---cCCEECHHHHHHHHHHHHhCC--CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCC
Confidence 468889888764321 111124589999999999886 67999999999976321 111 1568999999993
Q ss_pred cceeEEEeecccCCceeeeecCCCCCccceeeeecccccc----------cCCCCCceEEEEE
Q psy16143 78 YTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITS----------YYNVNPNYRLYKV 130 (388)
Q Consensus 78 ~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp----------~~~~NP~fRvy~~ 130 (388)
.|.+.|+||+|.+..... .+ ...+++||+.. +..+-|||+-+.+
T Consensus 182 -~v~~v~~GH~H~~~~~~~---~g-----~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (240)
T cd07402 182 -NVRAILCGHVHRPIDGSW---GG-----IPLLTAPSTCHQFAPDLDDFALDALAPGYRALSL 235 (240)
T ss_pred -CeeEEEECCcCchHHeEE---CC-----EEEEEcCcceeeecCCCCcccccccCCCCcEEEE
Confidence 489999999999876532 11 22345555443 2234578888776
No 12
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=98.71 E-value=1.5e-07 Score=91.23 Aligned_cols=84 Identities=14% Similarity=0.265 Sum_probs=62.6
Q ss_pred CeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCCc-------hHHHHHHHHHHHHhh
Q psy16143 5 DLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAEKSN-EKVHILSHIPPGSEDT-------MQVFQREYRKIINRF 76 (388)
Q Consensus 5 ~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~-------~~~~~~~y~~iv~ry 76 (388)
++|+|+||+..... .......|++||+++|+++.+++ ..+++++|+|+..... .....+.+.+|+++|
T Consensus 117 ~v~fi~Lds~~~~~----~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 192 (294)
T cd00839 117 PVHFVSLSTEVDFY----GDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKY 192 (294)
T ss_pred CEEEEEEecccccc----cCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHh
Confidence 57888888763221 22445799999999999987654 4588999999876321 234567789999999
Q ss_pred ccceeEEEeecccCCcee
Q psy16143 77 EYTIAAEFNGHTHYEDIT 94 (388)
Q Consensus 77 ~~~I~~~ffGH~H~D~f~ 94 (388)
. |...|+||+|.-+-.
T Consensus 193 ~--v~~vl~GH~H~y~r~ 208 (294)
T cd00839 193 G--VDLVLSGHVHAYERT 208 (294)
T ss_pred C--CCEEEEccceeeEee
Confidence 6 889999999997654
No 13
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=98.61 E-value=2.7e-07 Score=94.45 Aligned_cols=121 Identities=14% Similarity=0.282 Sum_probs=76.9
Q ss_pred CeEEEEEecccceE-----EEecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCC--CCchHHHH-----------
Q psy16143 5 DLKLLFWENHLVVK-----WNVLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGS--EDTMQVFQ----------- 66 (388)
Q Consensus 5 ~lr~i~~~t~~~N~-----~~~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~--~d~~~~~~----------- 66 (388)
.||+|+|++..++= -.....-| ..||+||+++|+.+.++++.|+|++|+|... ......|.
T Consensus 304 plrvIvLDSt~~~~~~s~pG~~~G~Ld-~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~L~ 382 (492)
T TIGR03768 304 PLKVIVLDDTQSEHDGSHDIHGHGSLD-AKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPDLQ 382 (492)
T ss_pred ceEEEEECCCccccccCCCCCcceeeC-HHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccchhhhcccccccccccc
Confidence 45999999884331 00111112 5899999999999987677777777777653 12333444
Q ss_pred -----HHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCccc--eeeeecccccccCCCCCceEEEEEe
Q psy16143 67 -----REYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRAT--NVAYNGGSITSYYNVNPNYRLYKVA 131 (388)
Q Consensus 67 -----~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~--~~~~~~Psvtp~~~~NP~fRvy~~d 131 (388)
.++.++|++|.+ |++.|+||.|+...+.+.+..+ .+|. .+-.-+.|+.-+ .=-||++|+-
T Consensus 383 n~~~~~eLlaLL~~hPn-Vla~LsGHvHrn~v~a~~~p~~-~~pe~gFWeveTaSl~Df---PQq~R~~Ei~ 449 (492)
T TIGR03768 383 NAVSLTGLVTTLQKYPN-LLMWIAGHRHLNTVKAFPSPDP-ARPEYGFWQVETASLRDF---PQQFRTFEIY 449 (492)
T ss_pred ccccHHHHHHHHhcCCC-eEEEEcCCcccccccccCCCCC-CCCcCceEEEeehhhccc---hhhceEEEEE
Confidence 389999999985 6799999999998875544332 1222 223344444432 2346766643
No 14
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.40 E-value=6.8e-07 Score=85.85 Aligned_cols=86 Identities=12% Similarity=0.189 Sum_probs=60.7
Q ss_pred CCeEEEEEecccceEEE---ecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCC--chHHHHHHHHHHHHhhcc
Q psy16143 4 QDLKLLFWENHLVVKWN---VLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSED--TMQVFQREYRKIINRFEY 78 (388)
Q Consensus 4 ~~lr~i~~~t~~~N~~~---~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d--~~~~~~~~y~~iv~ry~~ 78 (388)
.++++|.+|+..+-.+. ...+.=...||+||+++|+++++ +.+++|++|+|+.... .... ..++.+++++|.
T Consensus 122 ~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~~-~~~~IV~~HhP~~~~~~~~~~~-~~~~~~ll~~~~- 198 (256)
T cd07401 122 GNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKSTN-SNYTIWFGHYPTSTIISPSAKS-SSKFKDLLKKYN- 198 (256)
T ss_pred CCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHHHHHHhccc-CCeEEEEEcccchhccCCCcch-hHHHHHHHHhcC-
Confidence 47899999988431000 00111124899999999998864 3579999999996421 1122 234999999995
Q ss_pred ceeEEEeecccCCce
Q psy16143 79 TIAAEFNGHTHYEDI 93 (388)
Q Consensus 79 ~I~~~ffGH~H~D~f 93 (388)
|.+.|+||+|.++.
T Consensus 199 -v~~vl~GH~H~~~~ 212 (256)
T cd07401 199 -VTAYLCGHLHPLGG 212 (256)
T ss_pred -CcEEEeCCccCCCc
Confidence 78999999999988
No 15
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=98.32 E-value=7.7e-06 Score=82.99 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=63.8
Q ss_pred eEEEEEecccce-EEEecCCCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc---hHHHHHHHHHHHHhhcccee
Q psy16143 6 LKLLFWENHLVV-KWNVLYPVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT---MQVFQREYRKIINRFEYTIA 81 (388)
Q Consensus 6 lr~i~~~t~~~N-~~~~~~~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~---~~~~~~~y~~iv~ry~~~I~ 81 (388)
+.+|+++|..+. .|.+ ...+..+++||+++|+.|++...++|++||+|...... ...-..++..|+++|. |.
T Consensus 175 v~fifiDT~~l~~~~~~--~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL~ky~--Vd 250 (394)
T PTZ00422 175 VAFIFIDTWILSSSFPY--KKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLLKDAQ--VD 250 (394)
T ss_pred EEEEEEECchhcccCCc--cccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCCHHHHHHHHHHHHHcC--cC
Confidence 688999987443 2322 12245799999999988876667999999999877422 2334567899999997 99
Q ss_pred EEEeecccCCce
Q psy16143 82 AEFNGHTHYEDI 93 (388)
Q Consensus 82 ~~ffGH~H~D~f 93 (388)
+.|+||.|.-+.
T Consensus 251 lYisGHDH~lq~ 262 (394)
T PTZ00422 251 LYISGYDRNMEV 262 (394)
T ss_pred EEEEccccceEE
Confidence 999999998655
No 16
>PLN02533 probable purple acid phosphatase
Probab=98.07 E-value=5.3e-05 Score=78.15 Aligned_cols=64 Identities=17% Similarity=0.328 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCC-c------hHHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 28 NDQLSWLASTLLEAEKSN-EKVHILSHIPPGSED-T------MQVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d-~------~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
..|++||++.|+++..+. .++++++|+|+.... . ....++.+..|+.+|. |...|+||+|.-+-
T Consensus 265 ~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~--VdlvlsGH~H~YeR 336 (427)
T PLN02533 265 SEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKAR--VDLVFAGHVHAYER 336 (427)
T ss_pred hHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhC--CcEEEecceecccc
Confidence 589999999999886443 468888999987531 1 1234567899999996 89999999997553
No 17
>KOG2679|consensus
Probab=97.81 E-value=0.00015 Score=69.62 Aligned_cols=99 Identities=17% Similarity=0.260 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCC---CchHHHHHHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCcc
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSE---DTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRA 105 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~---d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~ 105 (388)
++|.||+.+|+++++ +.+||+||+|.-.. .....-.+++..|+++|. |.+.+.||.|--+. +.+. ..+
T Consensus 194 ~~l~~le~~L~~S~a--~wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n~--VdlY~nGHDHcLQh--is~~---e~~ 264 (336)
T KOG2679|consen 194 ALLSWLEVALKASRA--KWKIVVGHHPIKSAGHHGPTKELEKQLLPILEANG--VDLYINGHDHCLQH--ISSP---ESG 264 (336)
T ss_pred HHHHHHHHHHHHhhc--ceEEEecccceehhhccCChHHHHHHHHHHHHhcC--CcEEEecchhhhhh--ccCC---CCC
Confidence 799999999999987 59999999997542 223445678999999997 89999999998655 3232 245
Q ss_pred ceeeeecccccccCC------CCCceEEEEEeCCeeE
Q psy16143 106 TNVAYNGGSITSYYN------VNPNYRLYKVARGTWE 136 (388)
Q Consensus 106 ~~~~~~~Psvtp~~~------~NP~fRvy~~d~~t~~ 136 (388)
++++..+.+-.-+.+ -||..--+.||.+.|-
T Consensus 265 iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfm 301 (336)
T KOG2679|consen 265 IQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFM 301 (336)
T ss_pred eeEEeeCCcccccCCCccCCccChhheEEeeCCCceE
Confidence 666665555444433 4778778888877543
No 18
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.75 E-value=2.8e-05 Score=73.61 Aligned_cols=61 Identities=21% Similarity=0.348 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCC-----chHHH--------HHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 28 NDQLSWLASTLLEAEKSNEKVHILSHIPPGSED-----TMQVF--------QREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d-----~~~~~--------~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
..|++||+++|+++. +++++++.|+||.... ..+.| +..+.+++++|+ |+..++||+|...
T Consensus 149 ~~~l~~l~~~l~~~~--~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~--v~~~i~GH~H~~~ 222 (239)
T TIGR03729 149 AIVLKQLKKQLNQLD--NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYE--IKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHhcC--CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhC--CCEEEECCccCCC
Confidence 468999999998774 5789999999995410 11223 367899999994 8999999999985
No 19
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.57 E-value=0.00011 Score=67.55 Aligned_cols=67 Identities=19% Similarity=0.210 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHHHH---CCCeEEEEEccCCCCCC-ch----------------HHHHHHHHHHHHhhccceeEEEeec
Q psy16143 28 NDQLSWLASTLLEAEK---SNEKVHILSHIPPGSED-TM----------------QVFQREYRKIINRFEYTIAAEFNGH 87 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~---~~~kV~IigHiPpg~~d-~~----------------~~~~~~y~~iv~ry~~~I~~~ffGH 87 (388)
..|++||+++|.+.+. ....+++++||||.... .. ..-...+.+++.++. .|.+.|+||
T Consensus 94 ~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~-~v~~v~~GH 172 (199)
T cd07383 94 PSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERG-DVKGVFCGH 172 (199)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcC-CeEEEEeCC
Confidence 4799999999999852 34689999999985421 00 011335666666665 489999999
Q ss_pred ccCCceee
Q psy16143 88 THYEDITI 95 (388)
Q Consensus 88 ~H~D~f~i 95 (388)
+|..++..
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99977753
No 20
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.51 E-value=0.00034 Score=66.10 Aligned_cols=62 Identities=23% Similarity=0.317 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHCC--CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceee
Q psy16143 29 DQLSWLASTLLEAEKSN--EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITI 95 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~--~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i 95 (388)
.|++||+++|+.+..+. ..+++++|+||...... ...+.++++++. |...|+||+|......
T Consensus 146 ~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~---~~~~~~~~~~~~--v~~vl~GH~H~~~~~~ 209 (232)
T cd07393 146 RELERLELSLKAAKKREKEKIKIVMLHYPPANENGD---DSPISKLIEEYG--VDICVYGHLHGVGRDR 209 (232)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC---HHHHHHHHHHcC--CCEEEECCCCCCcccc
Confidence 58999999999987543 35999999998653221 236788888884 7899999999987654
No 21
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=97.39 E-value=0.00024 Score=59.94 Aligned_cols=60 Identities=25% Similarity=0.447 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCch-------HHHHHHHHHHHHhhccceeEEEeecccC
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTM-------QVFQREYRKIINRFEYTIAAEFNGHTHY 90 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~-------~~~~~~y~~iv~ry~~~I~~~ffGH~H~ 90 (388)
.+..|+...+..+++...+++|++|+||...... ....+.+..+++++. |...|+||+|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~GH~H~ 199 (200)
T PF00149_consen 133 QQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYN--VDLVLSGHTHR 199 (200)
T ss_dssp HHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTT--CSEEEEESSSS
T ss_pred chhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCC--CCEEEeCceec
Confidence 4555555555556666789999999999875322 234567788888886 89999999996
No 22
>KOG1378|consensus
Probab=97.12 E-value=0.0015 Score=67.07 Aligned_cols=82 Identities=12% Similarity=0.284 Sum_probs=59.9
Q ss_pred CeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHHHC-CCeEEEEEccCCCCCCc--h--H----HHHHHHHHHHHh
Q psy16143 5 DLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAEKS-NEKVHILSHIPPGSEDT--M--Q----VFQREYRKIINR 75 (388)
Q Consensus 5 ~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~-~~kV~IigHiPpg~~d~--~--~----~~~~~y~~iv~r 75 (388)
++++|+++|- -+| ...--..|.+||++.|+++.++ -.++|+++|.|-+.+.. . . .....+.+|+-+
T Consensus 256 ~vhfv~lsse--~~~---~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~ 330 (452)
T KOG1378|consen 256 GVHFVVLSTE--TYY---NFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVK 330 (452)
T ss_pred cEEEEEEecc--ccc---cccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHH
Confidence 4566666655 222 2112238999999999999776 67899999999887432 1 1 223468899999
Q ss_pred hccceeEEEeecccCCce
Q psy16143 76 FEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 76 y~~~I~~~ffGH~H~D~f 93 (388)
|+ |...|+||.|.=|-
T Consensus 331 ~~--VDvvf~GHvH~YER 346 (452)
T KOG1378|consen 331 YK--VDVVFWGHVHRYER 346 (452)
T ss_pred hc--eeEEEeccceehhc
Confidence 97 89999999999776
No 23
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=96.88 E-value=0.0012 Score=59.09 Aligned_cols=60 Identities=20% Similarity=0.256 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCC--CCchH----HHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 28 NDQLSWLASTLLEAEKSNEKVHILSHIPPGS--EDTMQ----VFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~--~d~~~----~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
..|++|| .+|. ....+.+++++|.||.. .+... .-++++.+++++++ ++..|+||+|...
T Consensus 109 ~~~l~~~-~~l~--~~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~--~~~~l~GH~H~~~ 174 (188)
T cd07392 109 EEEIVSD-GRLN--NLLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQ--PLLCICGHIHESR 174 (188)
T ss_pred HHHHHHh-hhhh--ccCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhC--CcEEEEecccccc
Confidence 3689998 4443 33457899999999954 22211 12467889999996 6899999999984
No 24
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.70 E-value=0.011 Score=56.25 Aligned_cols=84 Identities=19% Similarity=0.234 Sum_probs=55.0
Q ss_pred CeEEEEEecccceEEEecCCCChhhHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCC-c----hHHHHHHHHHHHHhhcc
Q psy16143 5 DLKLLFWENHLVVKWNVLYPVDPNDQLSWLASTLLEAEKSN-EKVHILSHIPPGSED-T----MQVFQREYRKIINRFEY 78 (388)
Q Consensus 5 ~lr~i~~~t~~~N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d-~----~~~~~~~y~~iv~ry~~ 78 (388)
++|++.+++...- ..+...=..||+||+++|+++...+ .+++++.|+|+.... . .-........++.++..
T Consensus 104 ~~~~~~~d~~~~~---~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (301)
T COG1409 104 GWRVIGLDSSVPG---VPLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGN 180 (301)
T ss_pred ceEEEEecCCCCC---CCCCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCC
Confidence 4566666655221 1122223489999999999987652 366666666665421 1 11234567777888875
Q ss_pred ceeEEEeecccCC
Q psy16143 79 TIAAEFNGHTHYE 91 (388)
Q Consensus 79 ~I~~~ffGH~H~D 91 (388)
.+...|.||.|..
T Consensus 181 ~v~~vl~GH~H~~ 193 (301)
T COG1409 181 DVRLVLSGHIHLA 193 (301)
T ss_pred ceEEEEeCccccc
Confidence 5899999999998
No 25
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.51 E-value=0.031 Score=53.96 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=54.0
Q ss_pred CCeEEEEEecccceEEEecCCCCh---hhHHHHHHHHHHHHHHCCCeEEEEEccCCCCC---CchH--------------
Q psy16143 4 QDLKLLFWENHLVVKWNVLYPVDP---NDQLSWLASTLLEAEKSNEKVHILSHIPPGSE---DTMQ-------------- 63 (388)
Q Consensus 4 ~~lr~i~~~t~~~N~~~~~~~~DP---~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~---d~~~-------------- 63 (388)
.+.++|.+|+.... +..++ ..|++||+++|+.+. .+..+||++|+|.... .|-+
T Consensus 124 ~~~~fV~Lds~~l~-----~~~~~~~~~~~~~~l~~~l~~~~-~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~ 197 (257)
T cd08163 124 GNHTFVILDTISLS-----NKDDPDVYQPPREFLHSFSAMKV-KSKPRILLTHVPLYRPPNTSCGPLRESKTPLPYGYGY 197 (257)
T ss_pred CCEEEEEEcccccc-----CCcccccchhHHHHHHhhhhccC-CCCcEEEEeccccccCCCCCCCCccccCCCCCCCCCc
Confidence 36788888876221 11222 369999999987653 3568899999997653 1210
Q ss_pred HHH-----HHHHHHHHhhccceeEEEeecccCCceeeeec
Q psy16143 64 VFQ-----REYRKIINRFEYTIAAEFNGHTHYEDITIFYD 98 (388)
Q Consensus 64 ~~~-----~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~ 98 (388)
.|. +.=..|++..+ .+.+|.||+|.- ..+.+.
T Consensus 198 ~yq~~l~~~~s~~il~~~~--P~~vfsGhdH~~-C~~~h~ 234 (257)
T cd08163 198 QYQNLLEPSLSEVILKAVQ--PVIAFSGDDHDY-CEVVHE 234 (257)
T ss_pred cceeecCHHHHHHHHHhhC--CcEEEecCCCcc-ceeEcc
Confidence 011 11236677776 467999999964 444443
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=95.48 E-value=0.032 Score=47.97 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=34.6
Q ss_pred EEEEccCCCCCCchHH----HHHHHHHHHHhhccceeEEEeecccCCceeee
Q psy16143 49 HILSHIPPGSEDTMQV----FQREYRKIINRFEYTIAAEFNGHTHYEDITIF 96 (388)
Q Consensus 49 ~IigHiPpg~~d~~~~----~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~ 96 (388)
++++|+||........ -.+.+.+++++++ +...++||+|.......
T Consensus 81 iv~~Hhp~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERLLDAGDALKLLAEAG--VDLVLHGHKHVPYVGNI 130 (144)
T ss_pred EEEecCCCCCCCccccccCCCHHHHHHHHHHcC--CCEEEECCCCCcCeeec
Confidence 7889999987421111 2457899999985 88999999999877643
No 27
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=94.48 E-value=0.043 Score=48.60 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc-------hH--HHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT-------MQ--VFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~-------~~--~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
.+++|+.+.+. ++++|++|+||..... .. .....+.++++++. |...++||+|...-
T Consensus 86 ~~~~~~~~d~~------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--v~~~i~GH~H~~~~ 151 (166)
T cd07404 86 AAARMRMNDFR------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADP--IDLWIHGHTHFNFD 151 (166)
T ss_pred HHHHhCCCCCC------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcC--CCEEEECCccccce
Confidence 34555555444 5899999999976421 11 22334666676653 78999999999843
No 28
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=94.20 E-value=0.1 Score=49.47 Aligned_cols=56 Identities=20% Similarity=0.247 Sum_probs=37.9
Q ss_pred HHHHHHHHHHH-H-CCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeeccc
Q psy16143 32 SWLASTLLEAE-K-SNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTH 89 (388)
Q Consensus 32 ~WL~~~L~~A~-~-~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H 89 (388)
+||...+.+.- + ...+.+++.|.||........=+..++++|++|+ -...++||.|
T Consensus 132 ~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~GS~alr~~I~~~~--P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQGSHEVAHLIKTHN--PLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCccCHHHHHHHHHHhC--CCEEEEcCCc
Confidence 78655433332 2 2457888999999553111233567899999998 4677999999
No 29
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=93.60 E-value=0.1 Score=47.70 Aligned_cols=46 Identities=22% Similarity=0.359 Sum_probs=36.5
Q ss_pred HHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 42 EKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 42 ~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
++...+||++.|.||...+..+. .+.+++++++ +.-.+|||.|.-.
T Consensus 155 ~k~~~~fivM~HYPP~s~~~t~~---~~sevlee~r--v~~~lyGHlHgv~ 200 (230)
T COG1768 155 PKGVSKFIVMTHYPPFSDDGTPG---PFSEVLEEGR--VSKCLYGHLHGVP 200 (230)
T ss_pred ccCcCeEEEEEecCCCCCCCCCc---chHHHHhhcc--eeeEEeeeccCCC
Confidence 45578999999999998766543 4666788886 8899999999754
No 30
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=91.50 E-value=0.25 Score=41.21 Aligned_cols=17 Identities=18% Similarity=0.260 Sum_probs=14.7
Q ss_pred eeEEEecccCCCCCcCC
Q psy16143 285 ISIIQLTDIHYDPKYLA 301 (388)
Q Consensus 285 ~~vlhisD~H~D~~Y~~ 301 (388)
+||+||||+|++.....
T Consensus 1 ~ri~~isD~H~~~~~~~ 17 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDS 17 (200)
T ss_dssp EEEEEEEBBTTTHHHHC
T ss_pred CeEEEEcCCCCCCcchh
Confidence 68999999999887765
No 31
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=90.56 E-value=0.4 Score=44.68 Aligned_cols=28 Identities=7% Similarity=0.084 Sum_probs=21.7
Q ss_pred CCCcHHHHHHHHHHHHh-----ccEEEecc-CCC
Q psy16143 336 CDMPLDVIRSALEQIKK-----HKIFWLSE-KGH 363 (388)
Q Consensus 336 CD~P~~l~~s~~~~i~~-----~~~~wtgd-~~h 363 (388)
+.-|...++.+++.+++ ++++++|| +.+
T Consensus 20 ~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~ 53 (240)
T cd07402 20 GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD 53 (240)
T ss_pred CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC
Confidence 45567888999998875 37999999 654
No 32
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=89.93 E-value=1.4 Score=37.80 Aligned_cols=74 Identities=23% Similarity=0.242 Sum_probs=43.4
Q ss_pred CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCccceeeeecccccc-cCCCCCc
Q psy16143 46 EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITS-YYNVNPN 124 (388)
Q Consensus 46 ~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp-~~~~NP~ 124 (388)
..-+++.|.++...... .+....++.+.. +...|+||+|.....- ..+ ...+..+|++. ..+..++
T Consensus 81 ~~~i~~~H~~~~~~~~~---~~~~~~~~~~~~--~~~~~~GH~H~~~~~~---~~~-----~~~~~~Gs~~~~~~~~~~~ 147 (156)
T PF12850_consen 81 GFKILLSHGHPYDVQWD---PAELREILSREN--VDLVLHGHTHRPQVFK---IGG-----IHVINPGSIGGPRHGDQSG 147 (156)
T ss_dssp TEEEEEESSTSSSSTTT---HHHHHHHHHHTT--SSEEEESSSSSEEEEE---ETT-----EEEEEE-GSSS-SSSSSEE
T ss_pred CCeEEEECCCCcccccC---hhhhhhhhcccC--CCEEEcCCcccceEEE---ECC-----EEEEECCcCCCCCCCCCCE
Confidence 45666677766552211 123445556443 7899999999976642 111 33345566664 3344789
Q ss_pred eEEEEEeC
Q psy16143 125 YRLYKVAR 132 (388)
Q Consensus 125 fRvy~~d~ 132 (388)
|.+++++.
T Consensus 148 ~~i~~~~~ 155 (156)
T PF12850_consen 148 YAILDIED 155 (156)
T ss_dssp EEEEEETT
T ss_pred EEEEEEec
Confidence 99988875
No 33
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=89.84 E-value=0.37 Score=44.05 Aligned_cols=14 Identities=29% Similarity=0.776 Sum_probs=12.2
Q ss_pred ceeEEEecccCCCC
Q psy16143 284 EISIIQLTDIHYDP 297 (388)
Q Consensus 284 ~~~vlhisD~H~D~ 297 (388)
++||+||||+|+..
T Consensus 2 ~~ki~~isDlH~~~ 15 (199)
T cd07383 2 KFKILQFADLHFGE 15 (199)
T ss_pred ceEEEEEeeecccC
Confidence 48999999999854
No 34
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=89.63 E-value=0.51 Score=40.40 Aligned_cols=43 Identities=26% Similarity=0.347 Sum_probs=30.2
Q ss_pred EEEEccCCCCCCch----HHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 49 HILSHIPPGSEDTM----QVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 49 ~IigHiPpg~~d~~----~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
++++|+||...... ..-.+.+.+++.++. +...|+||+|...-
T Consensus 59 Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~~~~--~~~vl~GH~H~~~~ 105 (129)
T cd07403 59 ILLTHAPPAGIGDGEDFAHRGFEAFLDFIDRFR--PKLFIHGHTHLNYG 105 (129)
T ss_pred EEEECCCCCcCcCcccccccCHHHHHHHHHHHC--CcEEEEcCcCCCcC
Confidence 78999998643211 112456778888886 68999999998654
No 35
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=89.10 E-value=2.3 Score=44.08 Aligned_cols=110 Identities=17% Similarity=0.219 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCC-------------Cch---HHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSE-------------DTM---QVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~-------------d~~---~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
.|++||+++|+++. +.-|| |+.-+|.+.. |.. +.-++++.++|++..-.=+..+.|-.|.-.
T Consensus 301 ~Q~~wL~~~L~~s~-a~~kv-i~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~ 378 (453)
T PF09423_consen 301 EQWDWLEDWLASSQ-ATWKV-IGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASA 378 (453)
T ss_dssp HHHHHHHHHHHH---SSEEE-EE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEE
T ss_pred HHHHHHHHHHhcCC-CcEEE-EEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchhe
Confidence 79999999999987 33344 4444443321 222 222456777776665211468999999987
Q ss_pred eeeeecCCC----CCccceeeeecccccccCC--------------CCCceEEEEEeCCeeEEeeE
Q psy16143 93 ITIFYDKNN----SSRATNVAYNGGSITSYYN--------------VNPNYRLYKVARGTWEVTDF 140 (388)
Q Consensus 93 f~i~~~~~~----~~~~~~~~~~~Psvtp~~~--------------~NP~fRvy~~d~~t~~v~d~ 140 (388)
..-+..... ......+-|+++|||.-.. .||..+....+.--+.++|.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~ 444 (453)
T PF09423_consen 379 ASRIPPDDADPPDGPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDI 444 (453)
T ss_dssp EEEEESSTT---TTS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEE
T ss_pred eeecccccccccCCCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEE
Confidence 765544331 1134677888888875222 26666666555444444443
No 36
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=87.21 E-value=1.3 Score=42.74 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=12.8
Q ss_pred CCCceeEEEecccCC
Q psy16143 281 SGDEISIIQLTDIHY 295 (388)
Q Consensus 281 ~~~~~~vlhisD~H~ 295 (388)
+...++|+||||+|+
T Consensus 11 ~~~~~~i~~iSD~Hl 25 (275)
T PRK11148 11 GEARVRILQITDTHL 25 (275)
T ss_pred CCCCEEEEEEcCccc
Confidence 345699999999998
No 37
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=86.80 E-value=0.78 Score=41.93 Aligned_cols=27 Identities=4% Similarity=0.078 Sum_probs=18.2
Q ss_pred CCcHHHHHHHHHHHHh---ccEEEecc-CCC
Q psy16143 337 DMPLDVIRSALEQIKK---HKIFWLSE-KGH 363 (388)
Q Consensus 337 D~P~~l~~s~~~~i~~---~~~~wtgd-~~h 363 (388)
..+..+++.+++.+++ ++++.+|| ..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~ 54 (223)
T cd00840 24 EDQFEAFEEIVELAIEEKVDFVLIAGDLFDS 54 (223)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEECCcccCC
Confidence 4466777777777765 46888888 544
No 38
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=86.61 E-value=0.77 Score=37.21 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=36.5
Q ss_pred HHHHHHCCCeE--------EEEEccCCCCCCchHH-----HHHHHHHHHHhhccceeEEEeecccCCceee
Q psy16143 38 LLEAEKSNEKV--------HILSHIPPGSEDTMQV-----FQREYRKIINRFEYTIAAEFNGHTHYEDITI 95 (388)
Q Consensus 38 L~~A~~~~~kV--------~IigHiPpg~~d~~~~-----~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i 95 (388)
+......+.++ +++.|.|+........ ....+..++.++. +...|+||+|......
T Consensus 51 ~~~~~~~~~~~~~~~GNHDi~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 51 LALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLELLEKYG--VDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHhhcCCCCEEEeCCCceEEEeccCCCCCchhhcccchhhHHHHHHHHHHhC--CCEEEeCCeecccccc
Confidence 34444455555 5779999877422111 2456667777775 6788999999987753
No 39
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=86.20 E-value=0.85 Score=38.92 Aligned_cols=44 Identities=23% Similarity=0.227 Sum_probs=30.2
Q ss_pred eEEEEEccCCCCC-CchH----HHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 47 KVHILSHIPPGSE-DTMQ----VFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 47 kV~IigHiPpg~~-d~~~----~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
..+++.|.||... +... .-.+...++++++. ....|+||+|...
T Consensus 69 ~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~i~GH~H~~~ 117 (135)
T cd07379 69 TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVR--PKLHVFGHIHEGY 117 (135)
T ss_pred CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHC--CcEEEEcCcCCcC
Confidence 4466789998652 2221 11356778888886 5789999999985
No 40
>KOG1432|consensus
Probab=86.18 E-value=2.7 Score=42.18 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHCC-----CeEEEEEccCCCCC---C---ch----------HHHHHHHHHHHH-hhccceeEEEee
Q psy16143 29 DQLSWLASTLLEAEKSN-----EKVHILSHIPPGSE---D---TM----------QVFQREYRKIIN-RFEYTIAAEFNG 86 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~-----~kV~IigHiPpg~~---d---~~----------~~~~~~y~~iv~-ry~~~I~~~ffG 86 (388)
.|+.||+.+-.+-+..+ ..-+++-|||.-.. + +. +.....+.+++. |-+ |.+.|+|
T Consensus 229 sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~--Vk~vf~G 306 (379)
T KOG1432|consen 229 SQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGN--VKGVFCG 306 (379)
T ss_pred hhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccccHHHHHHHhccC--cceEEec
Confidence 69999998885522211 25688899986431 1 01 112234555554 655 9999999
Q ss_pred cccCCceeeeecCC-CCCccceeeeecccccccCCCCCceEEEEEeCCeeE
Q psy16143 87 HTHYEDITIFYDKN-NSSRATNVAYNGGSITSYYNVNPNYRLYKVARGTWE 136 (388)
Q Consensus 87 H~H~D~f~i~~~~~-~~~~~~~~~~~~Psvtp~~~~NP~fRvy~~d~~t~~ 136 (388)
|.|...|=..+... -.=..-+..+-++. .-+--+..||+++|.....
T Consensus 307 HdHvNDfC~~~k~~~wlCygGgaGyggYg---~~gw~Rr~Rv~e~d~~~~~ 354 (379)
T KOG1432|consen 307 HDHVNDFCGELKGELWLCYGGGAGYGGYG---IGGWERRARVFELDLNKDR 354 (379)
T ss_pred cccccceecccCCeEEEEecCCCccCCcC---cCCcccceEEEEccccccc
Confidence 99999996444331 00000022233333 1245689999999975444
No 41
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=85.09 E-value=2.8 Score=40.97 Aligned_cols=65 Identities=22% Similarity=0.367 Sum_probs=42.2
Q ss_pred CChhhHHH--HHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCcee
Q psy16143 25 VDPNDQLS--WLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDIT 94 (388)
Q Consensus 25 ~DP~~Ql~--WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~ 94 (388)
.||...++ |+.++|++ +.-..|++++|...... ..+.+...+|.+++.++...++.||+|.-.+.
T Consensus 168 ~d~~~~~~~~~v~~~l~~--~~~DvIIvlsH~G~~~d---~~~~~~~~~la~~~~~id~~Ii~GHsH~~~~~ 234 (282)
T cd07407 168 QPVADVVQEPWFQDAINN--EDVDLILVLGHMPVRDD---AEFKVLHDAIRKIFPDTPIQFLGGHSHVRDFT 234 (282)
T ss_pred cCHHHHHHHHHHHHHHHh--cCCCEEEEEeCCCCCCC---ccHHHHHHHHHHhCCCCCEEEEeCCcccccce
Confidence 46666553 88888873 23467888899976553 22333344566777765558999999975443
No 42
>KOG1432|consensus
Probab=84.88 E-value=1.2 Score=44.70 Aligned_cols=23 Identities=26% Similarity=0.645 Sum_probs=17.0
Q ss_pred CCceeEEEecccCCCCCcCCCCCcCCC
Q psy16143 282 GDEISIIQLTDIHYDPKYLAGKTAHCI 308 (388)
Q Consensus 282 ~~~~~vlhisD~H~D~~Y~~g~~~~C~ 308 (388)
+.+||+|++||+|+ ..|.+..|.
T Consensus 51 ~g~fKIlqvaDlH~----g~g~~~~c~ 73 (379)
T KOG1432|consen 51 DGTFKILQVADLHF----GFGRETRCR 73 (379)
T ss_pred CCceEEEEeecccc----ccCCCcccc
Confidence 45899999999996 455566543
No 43
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=83.64 E-value=7.3 Score=33.65 Aligned_cols=73 Identities=18% Similarity=0.131 Sum_probs=39.6
Q ss_pred CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCccceeeeecccccc-cCCCCCc
Q psy16143 46 EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITS-YYNVNPN 124 (388)
Q Consensus 46 ~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp-~~~~NP~ 124 (388)
.+.+.+.|-++....... +. ..++++.. +...++||+|.-..... .+ ...+..+|++. .....++
T Consensus 75 g~~i~v~Hg~~~~~~~~~---~~-~~~~~~~~--~d~vi~GHtH~~~~~~~---~~-----~~~inpGs~~~~~~~~~~~ 140 (155)
T cd00841 75 GKRIFLTHGHLYGVKNGL---DR-LYLAKEGG--ADVVLYGHTHIPVIEKI---GG-----VLLLNPGSLSLPRGGGPPT 140 (155)
T ss_pred CEEEEEECCcccccccch---hh-hhhhhhcC--CCEEEECcccCCccEEE---CC-----EEEEeCCCccCcCCCCCCe
Confidence 345667787764421111 11 33344443 57889999998755321 11 22223345553 3234679
Q ss_pred eEEEEEeC
Q psy16143 125 YRLYKVAR 132 (388)
Q Consensus 125 fRvy~~d~ 132 (388)
|.+++++.
T Consensus 141 ~~i~~~~~ 148 (155)
T cd00841 141 YAILEIDD 148 (155)
T ss_pred EEEEEecC
Confidence 99999986
No 44
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=83.39 E-value=2 Score=40.89 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=38.0
Q ss_pred CceeEEEecccCCCCCcCCCCCcCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh-----ccEEE
Q psy16143 283 DEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKK-----HKIFW 357 (388)
Q Consensus 283 ~~~~vlhisD~H~D~~Y~~g~~~~C~~~~CCr~~~~~~~~~~~~Ag~~G~y~~CD~P~~l~~s~~~~i~~-----~~~~w 357 (388)
+.++|+|+||+|+... . . .+..-++. - +.+..+++.+++.|++ ++|++
T Consensus 3 ~~~~f~~~sD~h~~~~------~------------~-------~~~~~~~~-~-~~~~~~l~~~~~~i~~~~~~pd~ii~ 55 (262)
T cd07395 3 GPFYFIQGADPQLGLI------K------------K-------NLEGGGDE-W-DEEIKLTEQAVQAINKLNPKPKFVVV 55 (262)
T ss_pred CCEEEEEecCCccchh------h------------c-------cccCchhh-h-hhHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 4699999999998540 0 0 11111122 2 5566789999999975 47999
Q ss_pred ecc-CCCCCC
Q psy16143 358 LSE-KGHAKG 366 (388)
Q Consensus 358 tgd-~~h~~~ 366 (388)
+|| +.+..+
T Consensus 56 ~GDl~~~~~~ 65 (262)
T cd07395 56 CGDLVNAMPG 65 (262)
T ss_pred eCCcCCCCcc
Confidence 999 766544
No 45
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=80.76 E-value=2.1 Score=40.45 Aligned_cols=13 Identities=23% Similarity=0.639 Sum_probs=11.8
Q ss_pred eeEEEecccCCCC
Q psy16143 285 ISIIQLTDIHYDP 297 (388)
Q Consensus 285 ~~vlhisD~H~D~ 297 (388)
++++||||+|+.+
T Consensus 1 ~~i~~isD~H~~~ 13 (301)
T COG1409 1 MRIAHISDLHLGA 13 (301)
T ss_pred CeEEEEecCcccc
Confidence 4799999999988
No 46
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=80.55 E-value=3.1 Score=40.19 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=13.3
Q ss_pred CceeEEEecccCCCCC
Q psy16143 283 DEISIIQLTDIHYDPK 298 (388)
Q Consensus 283 ~~~~vlhisD~H~D~~ 298 (388)
+.++|+||||+|+...
T Consensus 48 ~~~rI~~lSDlH~~~~ 63 (271)
T PRK11340 48 APFKILFLADLHYSRF 63 (271)
T ss_pred CCcEEEEEcccCCCCc
Confidence 3599999999998654
No 47
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=80.33 E-value=2.8 Score=38.48 Aligned_cols=15 Identities=33% Similarity=0.651 Sum_probs=12.9
Q ss_pred eeEEEecccCCCCCc
Q psy16143 285 ISIIQLTDIHYDPKY 299 (388)
Q Consensus 285 ~~vlhisD~H~D~~Y 299 (388)
+||+|+||+|.+...
T Consensus 2 ~~i~~~sDlH~~~~~ 16 (223)
T cd07385 2 LRIAHLSDLHLGPFV 16 (223)
T ss_pred CEEEEEeecCCCccC
Confidence 789999999998653
No 48
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=80.00 E-value=5.1 Score=36.37 Aligned_cols=55 Identities=24% Similarity=0.192 Sum_probs=35.5
Q ss_pred eeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCCC-ceEEEEEeCCeeEEeeEEE
Q psy16143 80 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNP-NYRLYKVARGTWEVTDFDS 142 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~NP-~fRvy~~d~~t~~v~d~~~ 142 (388)
....+|||||.-.+.... -...+.-+|+|-..+.+| +|-+.+++.....+..++.
T Consensus 110 ~Dvli~GHTH~p~~~~~~--------~i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~~~~~~~ 165 (172)
T COG0622 110 ADVLIFGHTHKPVAEKVG--------GILLVNPGSVSGPRGGNPASYAILDVDNLEVEVLFLER 165 (172)
T ss_pred CCEEEECCCCcccEEEEC--------CEEEEcCCCcCCCCCCCCcEEEEEEcCCCEEEEEEeec
Confidence 457899999998775321 022333445664333477 9999999988766665543
No 49
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=77.95 E-value=13 Score=33.57 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=29.5
Q ss_pred eeEEEeecccCCceeeeecCCCCCccceeeeeccccc-cc---CC-CCCceEEEEEeCCe
Q psy16143 80 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT-SY---YN-VNPNYRLYKVARGT 134 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvt-p~---~~-~NP~fRvy~~d~~t 134 (388)
....+|||||.-..+.. .+ ...+.-+|++ |. .+ ..|+|-+++++.+.
T Consensus 107 ~dvii~GHTH~p~~~~~---~g-----~~viNPGSv~~~~~~~~~~~~~syail~~~~~~ 158 (178)
T cd07394 107 VDILISGHTHKFEAFEH---EG-----KFFINPGSATGAFSPLDPNVIPSFVLMDIQGSK 158 (178)
T ss_pred CCEEEECCCCcceEEEE---CC-----EEEEECCCCCCCCCCCCCCCCCeEEEEEecCCe
Confidence 46889999998766432 11 2334445565 22 22 24799999998774
No 50
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=77.46 E-value=12 Score=35.50 Aligned_cols=71 Identities=25% Similarity=0.361 Sum_probs=46.4
Q ss_pred EEEEccCCCCC--CchHHH----HHHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCC
Q psy16143 49 HILSHIPPGSE--DTMQVF----QREYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVN 122 (388)
Q Consensus 49 ~IigHiPpg~~--d~~~~~----~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~N 122 (388)
++..|.||... |....| +...++++++++. ...++||.|...=. +..| ...++.|+= . .-
T Consensus 141 Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP--~l~i~GHIHEs~G~---d~iG-----~TivVNPG~--~--~~ 206 (226)
T COG2129 141 ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQP--LLGLHGHIHESRGI---DKIG-----NTIVVNPGP--L--GE 206 (226)
T ss_pred EEEecCCCCCccccCCCCccccchHHHHHHHHHhCC--ceEEEeeecccccc---cccC-----CeEEECCCC--c--cC
Confidence 88899999763 321223 5789999999984 78999999984221 1112 233444532 1 24
Q ss_pred CceEEEEEeCC
Q psy16143 123 PNYRLYKVARG 133 (388)
Q Consensus 123 P~fRvy~~d~~ 133 (388)
..|.+++++..
T Consensus 207 g~yA~i~l~~~ 217 (226)
T COG2129 207 GRYALIELEKE 217 (226)
T ss_pred ceEEEEEecCc
Confidence 67888888866
No 51
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=76.89 E-value=20 Score=31.19 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=29.4
Q ss_pred eeEEEeecccCCceeeeecCCCCCccceeeeeccccc-ccCCCCCceEEEEEeCCe
Q psy16143 80 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT-SYYNVNPNYRLYKVARGT 134 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvt-p~~~~NP~fRvy~~d~~t 134 (388)
+...++||+|.-...... + ...+..+|++ |..+..|+|-+++++.+.
T Consensus 107 ~d~vi~GHtH~~~~~~~~---~-----~~~iNpGs~~~~~~~~~~~~~il~~~~~~ 154 (158)
T TIGR00040 107 VDVLIFGHTHIPVAEELR---G-----ILLINPGSLTGPRNGNTPSYAILDVDKDK 154 (158)
T ss_pred CCEEEECCCCCCccEEEC---C-----EEEEECCccccccCCCCCeEEEEEecCCe
Confidence 567999999987654221 1 2233344444 334446899999988664
No 52
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=74.91 E-value=6.3 Score=37.94 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=41.2
Q ss_pred CChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCC-chHHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 25 VDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSED-TMQVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 25 ~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d-~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
.||...+++..++|++. .-.-|++++|....... ..+.....-.+|.+++.. |..+|.||+|.-.
T Consensus 166 ~d~~~~~~~~v~~lr~~--~~D~IIvl~H~g~~~~~~~~~~~~~~~~~la~~~~~-vD~IlgGHsH~~~ 231 (277)
T cd07410 166 TDPVETAKKYVPKLRAE--GADVVVVLAHGGFERDLEESLTGENAAYELAEEVPG-IDAILTGHQHRRF 231 (277)
T ss_pred cCHHHHHHHHHHHHHHc--CCCEEEEEecCCcCCCcccccCCccHHHHHHhcCCC-CcEEEeCCCcccc
Confidence 46776666766776641 23578888999765421 112222334567777754 7889999999754
No 53
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=71.87 E-value=4.1 Score=39.03 Aligned_cols=14 Identities=21% Similarity=0.453 Sum_probs=12.1
Q ss_pred eeEEEecccCCCCC
Q psy16143 285 ISIIQLTDIHYDPK 298 (388)
Q Consensus 285 ~~vlhisD~H~D~~ 298 (388)
+||+|+||+|+...
T Consensus 1 mkilh~SD~Hlg~~ 14 (253)
T TIGR00619 1 MRILHTSDWHLGKT 14 (253)
T ss_pred CEEEEEhhhcCCCc
Confidence 58999999999764
No 54
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=68.19 E-value=7.3 Score=33.18 Aligned_cols=13 Identities=23% Similarity=0.462 Sum_probs=8.8
Q ss_pred eeEEEecccCCCC
Q psy16143 285 ISIIQLTDIHYDP 297 (388)
Q Consensus 285 ~~vlhisD~H~D~ 297 (388)
+||+++||+|...
T Consensus 1 Mki~~~sD~H~~~ 13 (156)
T PF12850_consen 1 MKIAVISDLHGNL 13 (156)
T ss_dssp EEEEEEE--TTTH
T ss_pred CEEEEEeCCCCCh
Confidence 4899999999943
No 55
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=66.82 E-value=4.2 Score=37.27 Aligned_cols=56 Identities=21% Similarity=0.303 Sum_probs=36.6
Q ss_pred ChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeee
Q psy16143 26 DPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIF 96 (388)
Q Consensus 26 DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~ 96 (388)
++....+++...+... +.+.-++++.|.|-... . +.+. -+..++.||+|.-++++.
T Consensus 116 ~~~~~~~~~~~~~~~~-~~~~~~I~l~H~P~~~~-----------~-~~~~--~~dl~l~GHtHggqi~~~ 171 (223)
T cd07385 116 DGLGRRPDLEKALKGL-DEDDPNILLAHQPDTAE-----------E-AAAW--GVDLQLSGHTHGGQIRLP 171 (223)
T ss_pred CccccCCCHHHHHhCC-CCCCCEEEEecCCChhH-----------H-hccc--CccEEEeccCCCCEEecc
Confidence 4444556676666543 33567889999875331 0 1222 378999999999998764
No 56
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=65.82 E-value=7.2 Score=37.30 Aligned_cols=12 Identities=25% Similarity=0.578 Sum_probs=10.1
Q ss_pred EEEecccCCCCC
Q psy16143 287 IIQLTDIHYDPK 298 (388)
Q Consensus 287 vlhisD~H~D~~ 298 (388)
|+||||+|+.+.
T Consensus 2 ~~~iSDlH~g~~ 13 (256)
T cd07401 2 FVHISDIHVSSF 13 (256)
T ss_pred EEEecccccCCc
Confidence 789999999753
No 57
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=65.58 E-value=5.9 Score=38.26 Aligned_cols=38 Identities=21% Similarity=0.285 Sum_probs=27.3
Q ss_pred CCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeee
Q psy16143 45 NEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIF 96 (388)
Q Consensus 45 ~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~ 96 (388)
+..+|++.|-|-.. ..+.++ -+..+|+||||-.+++++
T Consensus 182 ~~~~IlL~H~P~~~------------~~~~~~--~~dL~lsGHTHGGQi~lP 219 (271)
T PRK11340 182 NLPRLVLAHNPDSK------------EVMRDE--PWDLMLCGHTHGGQLRVP 219 (271)
T ss_pred CCCeEEEEcCCChh------------HhhccC--CCCEEEeccccCCeEEcc
Confidence 56788889988543 112333 378999999999999864
No 58
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=63.38 E-value=11 Score=39.00 Aligned_cols=47 Identities=23% Similarity=0.260 Sum_probs=31.0
Q ss_pred CceeEEEecccCCCCCcCCCCCcCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh---ccEEEec
Q psy16143 283 DEISIIQLTDIHYDPKYLAGKTAHCIAPLCCRVDQPNASSETDRATKYGHYDNCDMPLDVIRSALEQIKK---HKIFWLS 359 (388)
Q Consensus 283 ~~~~vlhisD~H~D~~Y~~g~~~~C~~~~CCr~~~~~~~~~~~~Ag~~G~y~~CD~P~~l~~s~~~~i~~---~~~~wtg 359 (388)
.++||||+||+|+... ... . +| -+-.+..++.+++.+++ ++|+.+|
T Consensus 2 ~~mKIlh~SD~HlG~~--~~~-~-------~r---------------------~~D~~~~f~eil~~a~~~~vD~VLiaG 50 (405)
T TIGR00583 2 DTIRILVSTDNHVGYG--END-P-------VR---------------------GDDSWNTFEEVLQIAKEQDVDMILLGG 50 (405)
T ss_pred CceEEEEEcCCCCCCc--cCC-c-------hh---------------------hhhHHHHHHHHHHHHHHcCCCEEEECC
Confidence 4799999999998632 100 0 01 13345677778877765 5788888
Q ss_pred c
Q psy16143 360 E 360 (388)
Q Consensus 360 d 360 (388)
|
T Consensus 51 D 51 (405)
T TIGR00583 51 D 51 (405)
T ss_pred c
Confidence 8
No 59
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=61.67 E-value=15 Score=35.23 Aligned_cols=91 Identities=9% Similarity=0.092 Sum_probs=48.1
Q ss_pred ChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCC-CC-----chHHHH--------HHHHHHHHhhc--cceeEEEeeccc
Q psy16143 26 DPNDQLSWLASTLLEAEKSNEKVHILSHIPPGS-ED-----TMQVFQ--------REYRKIINRFE--YTIAAEFNGHTH 89 (388)
Q Consensus 26 DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~-~d-----~~~~~~--------~~y~~iv~ry~--~~I~~~ffGH~H 89 (388)
+-.+-++.+.+.++ .-..+++.++++|-+|.- .+ |-..|. ..+.+-|.+-+ ..+...+|||+|
T Consensus 128 s~~eA~~~ive~~~-~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H 206 (238)
T cd07397 128 SLEESAQRIIAAAK-KAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMH 206 (238)
T ss_pred CHHHHHHHHHHHhh-hcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCcc
Confidence 34455556665554 223467899999999854 21 222331 23433333322 347899999999
Q ss_pred CCce--eeeecCCCCCccceeeeeccccccc
Q psy16143 90 YEDI--TIFYDKNNSSRATNVAYNGGSITSY 118 (388)
Q Consensus 90 ~D~f--~i~~~~~~~~~~~~~~~~~Psvtp~ 118 (388)
.-.- .-++..- ....-+..|+.+|..|.
T Consensus 207 ~~l~~~~~~r~~~-~~~~~gt~y~N~a~~pr 236 (238)
T cd07397 207 HRLRRGKGLRNMI-AVDREGTVYLNAASVPR 236 (238)
T ss_pred Cccccccccccee-eecCCCeEEEecccccc
Confidence 8621 1000000 00123566778887773
No 60
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=58.29 E-value=15 Score=32.44 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=21.8
Q ss_pred HHhhccceeEEEeecccCCceeeeecCCCCCccceeeeeccccc
Q psy16143 73 INRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT 116 (388)
Q Consensus 73 v~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvt 116 (388)
+.++. ...+|+||+|.. .++.... + ..-+++||+|
T Consensus 118 ~~~~~--~~~~l~GH~H~~-~~~~~~~-~-----~~e~~~~~~~ 152 (156)
T cd08165 118 LQWLK--PRLVLSGHTHSF-CEVTHPD-G-----TPEVTVPSFS 152 (156)
T ss_pred HHhhC--CCEEEEcccCCC-ceeEEEC-C-----EEEEEEecce
Confidence 44554 468999999994 3332221 2 4557888876
No 61
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=57.96 E-value=30 Score=35.54 Aligned_cols=50 Identities=28% Similarity=0.231 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCc-----------h-----HHHHHHHHHHHHhhcc
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSEDT-----------M-----QVFQREYRKIINRFEY 78 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~-----------~-----~~~~~~y~~iv~ry~~ 78 (388)
.|+.||.+.++.|++.|-+|+|=-|.+||...+ . ..+.+....|..||++
T Consensus 113 ~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~w~~ia~~f~~ 178 (407)
T COG2730 113 TQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKEENENVEATIDIWKFIANRFKN 178 (407)
T ss_pred hHHHHHHHHHHHHHhcCeeEEEEecccCCCCCCcCcccccccccccchhHHHHHHHHHHHHHhccC
Confidence 788999999999999999999999999976421 1 2244556677788875
No 62
>KOG4419|consensus
Probab=53.86 E-value=15 Score=39.56 Aligned_cols=64 Identities=17% Similarity=0.280 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeee
Q psy16143 28 NDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIF 96 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~ 96 (388)
..|.+|-.++++. ......|++||+|--.. ..|......|...+..+..-.|-||+|.-.|.+.
T Consensus 211 i~~~~~~~~m~~~--~~idlii~lgH~~~~~~---~e~~~~~~~ir~~~p~t~IqviGGHshird~a~~ 274 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT--TDIDLIIALGHSPVRDD---DEWKSLHAEIRKVHPNTPIQVIGGHSHIRDFAVY 274 (602)
T ss_pred HhccchHHHHhhc--cCccEEEEecccccccc---hhhhhHHHHHhhhCCCCceEEECchhhhhhhhhc
Confidence 4688899888886 45678888999997652 2333345556677888888899999999888754
No 63
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=51.73 E-value=60 Score=30.36 Aligned_cols=31 Identities=23% Similarity=0.143 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCC
Q psy16143 28 NDQLSWLASTLLEAEKSNEKVHILSHIPPGS 58 (388)
Q Consensus 28 ~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~ 58 (388)
...|+-|++.|+.|++.|.+|+|-.|-.|+.
T Consensus 58 ~~~~~~ld~~v~~a~~~gi~vild~h~~~~w 88 (281)
T PF00150_consen 58 ETYLARLDRIVDAAQAYGIYVILDLHNAPGW 88 (281)
T ss_dssp HHHHHHHHHHHHHHHHTT-EEEEEEEESTTC
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccCccc
Confidence 4799999999999999999999999998654
No 64
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=50.84 E-value=27 Score=32.85 Aligned_cols=62 Identities=16% Similarity=0.242 Sum_probs=35.8
Q ss_pred HHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCCCceEEEEEeCCeeEEeeE
Q psy16143 67 REYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPNYRLYKVARGTWEVTDF 140 (388)
Q Consensus 67 ~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~NP~fRvy~~d~~t~~v~d~ 140 (388)
..+.+++++|. +...++||+|......+.. .+ .+. .-++-|+ |. ....+++++.+.++++.+
T Consensus 177 ~~~~~~~~~~~--~~~~i~GH~H~~~~~~~~~-~~--~~~-~~~~lgd---w~---~~~~~~~~~~~~~~~~~~ 238 (241)
T PRK05340 177 EAVAALMEKHG--VDTLIHGHTHRPAIHQLQA-GG--QPA-TRIVLGD---WH---EQGSVLKVDADGVELIPF 238 (241)
T ss_pred HHHHHHHHHhC--CCEEEECcccCcceeeccC-CC--cce-EEEEeCC---CC---CCCeEEEEECCceEEEeC
Confidence 34667888885 6799999999976543211 11 111 1122232 32 224557888877777654
No 65
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=50.51 E-value=46 Score=32.19 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 29 DQLSWLASTLLEAEKSN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
+.++.++++++++|+++ .-|+++.|..... -.+|.++.. -|..++.||+|.-.
T Consensus 166 d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~----------d~~la~~~~-giD~IiggH~H~~~ 219 (281)
T cd07409 166 DEIEAAQKEADKLKAQGVNKIIALSHSGYEV----------DKEIARKVP-GVDVIVGGHSHTFL 219 (281)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCchh----------HHHHHHcCC-CCcEEEeCCcCccc
Confidence 34456777788877654 4567778986321 135566664 48899999999953
No 66
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=49.38 E-value=23 Score=33.09 Aligned_cols=26 Identities=23% Similarity=0.462 Sum_probs=19.9
Q ss_pred HHHHHHhhccceeEEEeecccCCceeee
Q psy16143 69 YRKIINRFEYTIAAEFNGHTHYEDITIF 96 (388)
Q Consensus 69 y~~iv~ry~~~I~~~ffGH~H~D~f~i~ 96 (388)
+.++++++. +..+++||+|......+
T Consensus 177 ~~~~~~~~~--~~~~i~GHtH~~~~~~~ 202 (231)
T TIGR01854 177 VAAVMRRYG--VDRLIHGHTHRPAIHPL 202 (231)
T ss_pred HHHHHHHcC--CCEEEECCccCcceeec
Confidence 456667775 68999999999887643
No 67
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=46.38 E-value=55 Score=30.72 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=33.2
Q ss_pred HHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHH-HHHHHhhccceeEEEeecccCCc
Q psy16143 34 LASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREY-RKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 34 L~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y-~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
+.+.++++|++-.-|+++.|.-.........+.+++ .+++. .-|..++.||.|.-+
T Consensus 162 i~~~i~~lr~~~D~vIv~~H~G~e~~~~p~~~~~~~A~~l~~---~G~DvIiG~H~H~~~ 218 (239)
T smart00854 162 ILADIARARKKADVVIVSLHWGVEYQYEPTDEQRELAHALID---AGADVVIGHHPHVLQ 218 (239)
T ss_pred HHHHHHHHhccCCEEEEEecCccccCCCCCHHHHHHHHHHHH---cCCCEEEcCCCCcCC
Confidence 445556666556778888998653322222333333 33333 237889999999864
No 68
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=45.41 E-value=71 Score=29.86 Aligned_cols=59 Identities=20% Similarity=0.110 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHH-HHHHhhccceeEEEeecccCCce
Q psy16143 32 SWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYR-KIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 32 ~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~-~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
+-+.+.+++++++-.-|++..|.-............++. +++. .-|..++.||.|.-+-
T Consensus 162 ~~~~~~i~~lr~~~D~vIv~~H~G~e~~~~p~~~~~~la~~l~~---~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 162 ERIAADIAEAKKKADIVIVSLHWGVEYSYYPTPEQRELARALID---AGADLVIGHHPHVLQG 221 (239)
T ss_pred HHHHHHHHHHhhcCCEEEEEecCcccCCCCCCHHHHHHHHHHHH---CCCCEEEcCCCCcCCC
Confidence 456777777777777888889974433222222233332 2232 1377889999998643
No 69
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=41.28 E-value=16 Score=34.94 Aligned_cols=63 Identities=22% Similarity=0.292 Sum_probs=36.3
Q ss_pred hhhHHHHHHHHHHHHHHCCCeEEEEEccCC-CCCCchHHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 27 PNDQLSWLASTLLEAEKSNEKVHILSHIPP-GSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 27 P~~Ql~WL~~~L~~A~~~~~kV~IigHiPp-g~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
|.-.-.|..+.|.+++ .++.|++-|.|| ...+....=++..+.+|++|+..| .++||.|...-
T Consensus 157 P~weaey~lk~l~elk--~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~P~i--vl~Ghihe~~~ 220 (255)
T PF14582_consen 157 PAWEAEYSLKFLRELK--DYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYNPDI--VLCGHIHESHG 220 (255)
T ss_dssp EHHHHHHHHGGGGGCT--SSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH--SE--EEE-SSS-EE-
T ss_pred hHHHHHHHHHHHHhcc--cccEEEEEecCCccCCCcccccHHHHHHHHHhcCCcE--EEecccccchh
Confidence 3334445556666654 568888899999 222222233567889999999654 56699998763
No 70
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=39.87 E-value=1e+02 Score=29.09 Aligned_cols=63 Identities=21% Similarity=0.133 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHH-HHHHHHhhccceeEEEeecccCCcee
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQRE-YRKIINRFEYTIAAEFNGHTHYEDIT 94 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~-y~~iv~ry~~~I~~~ffGH~H~D~f~ 94 (388)
..++.+.++++++++...-|+++.|--.-....-..+.++ ..++++.= +..++.+|.|.-+=-
T Consensus 168 ~~~~~i~~~i~~~r~~~D~vIv~~HwG~e~~~~p~~~q~~~a~~lidaG---aDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 168 PGIERIKEDIREARKKADVVIVSLHWGIEYENYPTPEQRELARALIDAG---ADIIIGHHPHVIQPV 231 (250)
T ss_pred chHHHHHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHcC---CCEEEeCCCCcccce
Confidence 3458999999999977788999999832222233344443 45666643 456788999986554
No 71
>PF14417 MEDS: MEDS: MEthanogen/methylotroph, DcmR Sensory domain
Probab=39.40 E-value=1.2e+02 Score=27.49 Aligned_cols=61 Identities=7% Similarity=0.090 Sum_probs=43.1
Q ss_pred eEEEecCCCChhhHHHHHHHHHHHHHHCCC-eEEEEEccCCCCCCchHH---HHHHHHHHHHhhc
Q psy16143 17 VKWNVLYPVDPNDQLSWLASTLLEAEKSNE-KVHILSHIPPGSEDTMQV---FQREYRKIINRFE 77 (388)
Q Consensus 17 N~~~~~~~~DP~~Ql~WL~~~L~~A~~~~~-kV~IigHiPpg~~d~~~~---~~~~y~~iv~ry~ 77 (388)
.+|......||..+++-+...++.|.+.|. .+-|+|++.....+.... +......++.++.
T Consensus 90 ~~Y~~~g~f~~~~~i~~~~~~~~~a~~~G~~~lRv~ge~~w~~~~~~~~l~~yE~~ln~~~~~~~ 154 (191)
T PF14417_consen 90 EWYLPDGRFDPARMIAFWRAALEQALAEGYRGLRVIGEMTWALRSGWEELLRYEALLNRLFAEHP 154 (191)
T ss_pred hhhccCCCcCHHHHHHHHHHHHHHHHhCCCCcEEEEEechhhccccHHHHHHHHHHHHHHhcCCC
Confidence 355555678999999999999999998875 999999988665442222 2334555555553
No 72
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=39.23 E-value=34 Score=31.77 Aligned_cols=41 Identities=22% Similarity=0.469 Sum_probs=27.0
Q ss_pred EEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeee
Q psy16143 49 HILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIF 96 (388)
Q Consensus 49 ~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~ 96 (388)
+++.|+|+-... ......++.+|. +..+|.||.|.-..-+.
T Consensus 112 i~lsH~P~~~~~-----~~~~~~~~~~~~--p~~Ifs~H~H~s~~~~~ 152 (195)
T cd08166 112 IMLSHVPLLAEG-----GQALKHVVTDLD--PDLIFSAHRHKSSIFMY 152 (195)
T ss_pred eeeecccccccc-----cHHHHHHHHhcC--ceEEEEcCccceeeEEe
Confidence 566666654411 113467788885 77899999999765433
No 73
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=39.15 E-value=66 Score=30.64 Aligned_cols=51 Identities=16% Similarity=0.222 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHCC-CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 32 SWLASTLLEAEKSN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 32 ~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
+-+.+.++++++.+ .-|++++|.+... + .+|.+++. -|-.+|.||+|....
T Consensus 158 ~~~~~~v~~~~~~~~D~iVvl~H~g~~~-d---------~~la~~~~-~iD~IlgGH~H~~~~ 209 (257)
T cd07406 158 ETARELVDELREQGADLIIALTHMRLPN-D---------KRLAREVP-EIDLILGGHDHEYIL 209 (257)
T ss_pred HHHHHHHHHHHhCCCCEEEEEeccCchh-h---------HHHHHhCC-CCceEEecccceeEe
Confidence 34455554444433 4567778886532 1 24667775 378899999998653
No 74
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=38.84 E-value=15 Score=31.18 Aligned_cols=12 Identities=42% Similarity=1.137 Sum_probs=10.1
Q ss_pred EEEecccCCCCC
Q psy16143 287 IIQLTDIHYDPK 298 (388)
Q Consensus 287 vlhisD~H~D~~ 298 (388)
|+||||+|+...
T Consensus 1 il~isD~Hl~~~ 12 (144)
T cd07400 1 ILHLSDLHFGPE 12 (144)
T ss_pred CeEeCccCCCCC
Confidence 689999999754
No 75
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=38.30 E-value=39 Score=31.29 Aligned_cols=25 Identities=24% Similarity=0.317 Sum_probs=19.4
Q ss_pred HHHHHHhhccceeEEEeecccCCceee
Q psy16143 69 YRKIINRFEYTIAAEFNGHTHYEDITI 95 (388)
Q Consensus 69 y~~iv~ry~~~I~~~ffGH~H~D~f~i 95 (388)
..++++++. ...+++||||.+..++
T Consensus 159 ~~~~l~~~~--~~~iv~GHTh~~~~~~ 183 (208)
T cd07425 159 LDKVLERLG--AKRMVVGHTPQEGGIV 183 (208)
T ss_pred HHHHHHHcC--CCeEEEcCeeeecCce
Confidence 446677775 5789999999987765
No 76
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=35.30 E-value=55 Score=38.39 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=36.7
Q ss_pred CChhhHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCC
Q psy16143 25 VDPNDQLSWLASTLLEAEKSN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYE 91 (388)
Q Consensus 25 ~DP~~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D 91 (388)
.||....+=...+| ++.| .-|++++|.............+.-.+|.++... |.+++.||+|.-
T Consensus 217 ~d~v~~~~~~v~~l---k~~gaDvII~l~H~G~~~~~~~~~~en~~~~la~~~~g-ID~Il~GHsH~~ 280 (1163)
T PRK09419 217 KNIVEEANKTIPEM---KKGGADVIVALAHSGIESEYQSSGAEDSVYDLAEKTKG-IDAIVAGHQHGL 280 (1163)
T ss_pred CCHHHHHHHHHHHH---HhcCCCEEEEEeccCcCCCCCCCCcchHHHHHHHhCCC-CcEEEeCCCccc
Confidence 45655443333344 3333 567777999765432222222333456666654 899999999996
No 77
>PRK09453 phosphodiesterase; Provisional
Probab=35.04 E-value=89 Score=27.86 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=26.9
Q ss_pred eeEEEeecccCCceeeeecCCCCCccceeeeeccccc-ccCCCCCceEEEEEeCCeeEEee
Q psy16143 80 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT-SYYNVNPNYRLYKVARGTWEVTD 139 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvt-p~~~~NP~fRvy~~d~~t~~v~d 139 (388)
....++||+|.-..+.. .+ ...+..+|++ |.....++|-++++ +++++.+
T Consensus 119 ~d~vi~GHtH~p~~~~~---~~-----~~~iNpGs~~~p~~~~~~s~~il~~--~~~~~~~ 169 (182)
T PRK09453 119 GDVLVYGHTHIPVAEKQ---GG-----IILFNPGSVSLPKGGYPASYGILDD--NVLSVID 169 (182)
T ss_pred CCEEEECCCCCCcceEE---CC-----EEEEECCCccccCCCCCCeEEEEEC--CcEEEEE
Confidence 35789999998655432 11 2223334444 33233467777765 3445543
No 78
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=34.43 E-value=86 Score=30.44 Aligned_cols=62 Identities=18% Similarity=0.285 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHCC-CeEEEEEccCCCCCCchHHH---HHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 31 LSWLASTLLEAEKSN-EKVHILSHIPPGSEDTMQVF---QREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 31 l~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~~~~~---~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
++-+.+.++++++.+ .-|+++.|...........+ ..+-.+++++-..-|..++.||+|.-.
T Consensus 177 ~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~ 242 (288)
T cd07412 177 VEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRLDPDVDVVFAGHTHQAY 242 (288)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhcCCCCCEEEeCccCccc
Confidence 344556666666433 45677799876532211111 112244455443358899999999864
No 79
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=33.92 E-value=2.7e+02 Score=25.82 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=28.3
Q ss_pred HHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 39 LEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 39 ~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
+..+++-.-|+++.|-+... . .++.++.. -|..+|.||+|.-..
T Consensus 165 ~~~~~~~D~vIvl~H~g~~~-------~---~~la~~~~-giDlvlggH~H~~~~ 208 (252)
T cd00845 165 ELLAEGADVIILLSHLGLDD-------D---EELAEEVP-GIDVILGGHTHHLLE 208 (252)
T ss_pred HHHhCCCCEEEEEeccCccc-------h---HHHHhcCC-CccEEEcCCcCcccC
Confidence 33344456788889987654 1 23344443 478899999998644
No 80
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=33.05 E-value=55 Score=31.00 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=32.5
Q ss_pred HHHHHHHHCCCeEEEEEccCCCCCCc--h---HHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 36 STLLEAEKSNEKVHILSHIPPGSEDT--M---QVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 36 ~~L~~A~~~~~kV~IigHiPpg~~d~--~---~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
+.+++|.++|-. +||.|||+..... + +...+....+++ .. ...+.-||+.|..
T Consensus 44 ~vi~~A~~~~~d-lIItHHP~~f~~~~~~~~~~~~~~~~~~li~-~~---I~vy~~Ht~lD~~ 101 (241)
T PF01784_consen 44 EVIEEAIEKGAD-LIITHHPLFFKPLKSLTGDDYKGKIIEKLIK-NG---ISVYSAHTNLDAA 101 (241)
T ss_dssp HHHHHHHHTT-S-EEEESS-SSSSTSSHCHCHSHHHHHHHHHHH-TT----EEEEESHHHHHS
T ss_pred HHHHHHHHcCCC-EEEEcCchhhcCCccccccchhhHHHHHHHH-CC---CEEEEeccccccc
Confidence 678888887766 7889999866321 1 112334444444 43 4788999999855
No 81
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=32.99 E-value=36 Score=30.60 Aligned_cols=27 Identities=26% Similarity=0.212 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEEccCC
Q psy16143 30 QLSWLASTLLEAEKSNEKVHILSHIPP 56 (388)
Q Consensus 30 Ql~WL~~~L~~A~~~~~kV~IigHiPp 56 (388)
.-.||+..|++|++.|.||++-...-+
T Consensus 63 ~~d~l~~~L~~A~~~Gmkv~~Gl~~~~ 89 (166)
T PF14488_consen 63 PVDLLEMILDAADKYGMKVFVGLYFDP 89 (166)
T ss_pred cccHHHHHHHHHHHcCCEEEEeCCCCc
Confidence 336999999999999999999765543
No 82
>PRK10799 metal-binding protein; Provisional
Probab=32.83 E-value=58 Score=31.06 Aligned_cols=53 Identities=9% Similarity=0.071 Sum_probs=32.2
Q ss_pred HHHHHHHHCCCeEEEEEccCCCCCCc---hHHH-HHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 36 STLLEAEKSNEKVHILSHIPPGSEDT---MQVF-QREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 36 ~~L~~A~~~~~kV~IigHiPpg~~d~---~~~~-~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
+.+++|.++|-..+ +.|||...... .... .+.+..+++ .. ...+.-|||.|.-
T Consensus 47 ~vi~~A~~~~~dlI-itHHP~~~~~~~~~~~~~~~~~~~~li~-~~---i~vy~~Htn~D~~ 103 (247)
T PRK10799 47 ALLDEAVRLQADAV-IVHHGYFWKGESPVIRGMKRNRLKTLLA-ND---INLYGWHLPLDAH 103 (247)
T ss_pred HHHHHHHHCCCCEE-EECCchhccCCCccccchHHHHHHHHHH-CC---CeEEEEecchhhC
Confidence 57888887766665 48998754321 1112 233444443 22 4788999999965
No 83
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=32.43 E-value=24 Score=32.02 Aligned_cols=62 Identities=11% Similarity=-0.075 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHH-HHHHHHHHHhhccceeEEEeecccCCcee
Q psy16143 30 QLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVF-QREYRKIINRFEYTIAAEFNGHTHYEDIT 94 (388)
Q Consensus 30 Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~-~~~y~~iv~ry~~~I~~~ffGH~H~D~f~ 94 (388)
.++++...+... ..+...|+++|.|.........- .......+.. .-+...+.||+|.-...
T Consensus 142 ~~~~~~~~~~~~-~~~~~~Il~~H~~~~~~~~~~~~~~~~~~~~~~~--~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 142 LLADAELRPRPL-DPDDFNILLLHGGVAGAGPSDSERAPFVPEALLP--AGFDYVALGHIHRPQII 204 (223)
T ss_pred HHHHHHHHhhcc-CCCCcEEEEEeeeeecCCCCcccccccCcHhhcC--cCCCEEECCCcccCeee
Confidence 444434443333 34667899999986542110000 0111122222 23779999999997653
No 84
>PHA02546 47 endonuclease subunit; Provisional
Probab=31.50 E-value=25 Score=35.12 Aligned_cols=14 Identities=21% Similarity=0.461 Sum_probs=11.9
Q ss_pred eeEEEecccCCCCC
Q psy16143 285 ISIIQLTDIHYDPK 298 (388)
Q Consensus 285 ~~vlhisD~H~D~~ 298 (388)
+|+||+||+|+...
T Consensus 1 MKilhiSD~HLG~~ 14 (340)
T PHA02546 1 MKILLIGDQHLGVR 14 (340)
T ss_pred CeEEEEeeecCCCc
Confidence 48999999999853
No 85
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=31.47 E-value=70 Score=28.61 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=19.5
Q ss_pred eeEEEeecccCCceeeeecCCCCCccceeeeeccccc
Q psy16143 80 IAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSIT 116 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvt 116 (388)
+..+|.||+|.- .++...... .+ ....+.||.+
T Consensus 135 ~~~~lsGH~H~~-~~~~~~~~~--~~-~~ei~v~S~s 167 (171)
T cd07384 135 PVLILSGHDHDQ-CEVVHSSKA--GS-VREITVKSFS 167 (171)
T ss_pred ceEEEeCcccCC-eEEEecCCC--CC-ceEEeeccch
Confidence 578999999998 544433211 11 3445566654
No 86
>cd02960 AGR Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of the cement gland and the induction of forebrain fate. The human homologs, hAG-2 and hAG-3, are secreted proteins associated with estrogen-positive breast tumors. Yeast two-hybrid studies identified the metastasis-associated C4.4a protein and dystroglycan as binding partners, indicating possible roles in the development and progression of breast cancer. hAG-2 has also been implicated in prostate cancer. Its gene was cloned as an androgen-inducible gene and it was shown to be overexpressed in prostate cancer cells at the mRNA and protein levels. AGR proteins contain one conserved cysteine corresponding to the first cysteine in the CXXC motif of TRX. They show high sequence similarity to ERp19.
Probab=31.37 E-value=39 Score=29.28 Aligned_cols=25 Identities=32% Similarity=0.700 Sum_probs=21.0
Q ss_pred hHHHHH---HHHHHHHHHCCCeEEEEEc
Q psy16143 29 DQLSWL---ASTLLEAEKSNEKVHILSH 53 (388)
Q Consensus 29 ~Ql~WL---~~~L~~A~~~~~kV~IigH 53 (388)
+++.|+ ++.|+.|+++|+.|+|+-|
T Consensus 4 ~~i~W~~~~eeal~~Ak~~~Kpvmv~f~ 31 (130)
T cd02960 4 DDIIWVQTYEEGLYKAKKSNKPLMVIHH 31 (130)
T ss_pred ccccchhhHHHHHHHHHHCCCeEEEEEe
Confidence 578896 7889999999999999854
No 87
>KOG3325|consensus
Probab=31.30 E-value=1.8e+02 Score=26.19 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=44.5
Q ss_pred eEEEEEccCCCCCC--chHHHHH-HHHHHHHhhccceeEEEeecccCCceeeeecCCCCCcccee--eeecccccccCCC
Q psy16143 47 KVHILSHIPPGSED--TMQVFQR-EYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNV--AYNGGSITSYYNV 121 (388)
Q Consensus 47 kV~IigHiPpg~~d--~~~~~~~-~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~--~~~~Psvtp~~~~ 121 (388)
+|+-+|-.-.|.-. ..-.|.+ +-..+++|-=| +.-.++||||.-+- +. .+| .--+.+ +--+++++-..-.
T Consensus 73 kvvtvGqfkIG~chGhqViP~gd~~sL~~LaRqld-vDILl~G~Th~f~A--ye-~eg-~ffvnPGSaTGAfn~~~t~~~ 147 (183)
T KOG3325|consen 73 KVVTVGQFKIGLCHGHQVIPWGDPESLALLARQLD-VDILLTGHTHKFEA--YE-HEG-KFFVNPGSATGAFNVSDTDII 147 (183)
T ss_pred ceEEeccEEEEeecCcEeecCCCHHHHHHHHHhcC-CcEEEeCCceeEEE--EE-eCC-cEEeCCCcccCCCcccccCCC
Confidence 55555554444411 1123432 34566666555 67889999998433 22 111 001111 1123333332236
Q ss_pred CCceEEEEEeCCeeEEeeE
Q psy16143 122 NPNYRLYKVARGTWEVTDF 140 (388)
Q Consensus 122 NP~fRvy~~d~~t~~v~d~ 140 (388)
+|||-+..+...| ++-|
T Consensus 148 ~PSFvLmDiqg~~--~v~Y 164 (183)
T KOG3325|consen 148 VPSFVLMDIQGST--VVTY 164 (183)
T ss_pred CCceEEEEecCCE--EEEE
Confidence 8999998888775 4444
No 88
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=29.93 E-value=98 Score=30.66 Aligned_cols=45 Identities=13% Similarity=0.126 Sum_probs=28.0
Q ss_pred HHHHHHCC-CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 38 LLEAEKSN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 38 L~~A~~~~-~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
.++.++++ ..|++++|.-....+ .+|.++... |..++.||+|.-.
T Consensus 200 v~~Lr~~gvD~II~LsH~g~~~~d---------~~lA~~v~g-IDvIigGHsH~~l 245 (313)
T cd08162 200 IDALTAQGINKIILLSHLQQISIE---------QALAALLSG-VDVIIAGGSNTLL 245 (313)
T ss_pred HHHHHHCCCCEEEEEecccccchH---------HHHHhcCCC-CCEEEeCCCCccC
Confidence 33334443 457777998311111 356777765 8999999999853
No 89
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=29.42 E-value=1.1e+02 Score=29.02 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHH--CCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCce
Q psy16143 31 LSWLASTLLEAEK--SNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDI 93 (388)
Q Consensus 31 l~WL~~~L~~A~~--~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f 93 (388)
.+.+.+.+.+.++ .-.-|++++|.+.... .++.+++. -|..+|.||+|....
T Consensus 168 ~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~~----------~~la~~~~-~iDlilgGH~H~~~~ 221 (264)
T cd07411 168 EEELQEVVVKLRREEGVDVVVLLSHNGLPVD----------VELAERVP-GIDVILSGHTHERTP 221 (264)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCCchhh----------HHHHhcCC-CCcEEEeCccccccc
Confidence 3445555444432 2456888899875321 24556665 477899999997644
No 90
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=29.07 E-value=27 Score=32.76 Aligned_cols=11 Identities=36% Similarity=0.534 Sum_probs=10.0
Q ss_pred eEEEecccCCC
Q psy16143 286 SIIQLTDIHYD 296 (388)
Q Consensus 286 ~vlhisD~H~D 296 (388)
||+||||+|+|
T Consensus 1 ki~~iSDlH~~ 11 (239)
T TIGR03729 1 KIAFSSDLHID 11 (239)
T ss_pred CEEEEEeecCC
Confidence 68999999997
No 91
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=27.79 E-value=55 Score=34.60 Aligned_cols=59 Identities=15% Similarity=0.103 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHHHC-CCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccC
Q psy16143 29 DQLSWLASTLLEAEKS-NEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHY 90 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~-~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~ 90 (388)
+.++++.+.+.+-+++ =..|++++|.+.........-...-.. +.. ..|..+|.||+|.
T Consensus 187 d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~~~~-~~~--~~iD~i~~GH~H~ 246 (517)
T COG0737 187 DPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPGDVD-VAV--PGIDLIIGGHSHT 246 (517)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccccccc-ccc--cCcceEeccCCcc
Confidence 3555666666666654 468888899987764221100000000 011 2389999999996
No 92
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=26.77 E-value=1.2e+02 Score=29.47 Aligned_cols=48 Identities=8% Similarity=-0.013 Sum_probs=26.9
Q ss_pred CCeEEEEEccCCCCCCchHHHHHHHHHHHHhhc-cceeEEEeecccCCc
Q psy16143 45 NEKVHILSHIPPGSEDTMQVFQREYRKIINRFE-YTIAAEFNGHTHYED 92 (388)
Q Consensus 45 ~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~-~~I~~~ffGH~H~D~ 92 (388)
-.-|+++.|..-........-...=.+|.++.. .-|..++.||+|.-.
T Consensus 174 ~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 174 PDIVIAATHMGHYDNGEHGSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCEEEEEecccccCCccccccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 457888899976432111000000124555552 347889999999953
No 93
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=26.64 E-value=32 Score=34.79 Aligned_cols=12 Identities=25% Similarity=0.551 Sum_probs=11.1
Q ss_pred eeEEEecccCCC
Q psy16143 285 ISIIQLTDIHYD 296 (388)
Q Consensus 285 ~~vlhisD~H~D 296 (388)
+||||+||.|+.
T Consensus 1 mkilHtSD~HLG 12 (390)
T COG0420 1 MKILHTSDWHLG 12 (390)
T ss_pred CeeEEecccccc
Confidence 589999999998
No 94
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=26.16 E-value=1.2e+02 Score=35.69 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=34.2
Q ss_pred HHHHHHHHHH--HCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 33 WLASTLLEAE--KSNEKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 33 WL~~~L~~A~--~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
-+++..++.+ +.-.-|+++.|.......... ...-.+|.++... |..++.||+|.-.
T Consensus 825 ~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~--~~~~~~lA~~v~g-IDvIigGHsH~~~ 883 (1163)
T PRK09419 825 AAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG--EITGLELAKKVKG-VDAIISAHTHTLV 883 (1163)
T ss_pred HHHHHHHHHHhhcCCCEEEEEecCCcccccccc--ccHHHHHHHhCCC-CCEEEeCCCCccc
Confidence 3444444443 123578888999765421111 2234566777765 8899999999853
No 95
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=25.48 E-value=1.1e+02 Score=34.36 Aligned_cols=63 Identities=13% Similarity=0.103 Sum_probs=34.2
Q ss_pred CChhhHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCc
Q psy16143 25 VDPNDQLSWLASTLLEAEKSN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYED 92 (388)
Q Consensus 25 ~DP~~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~ 92 (388)
.||....+=+..+|+ ++| .-||+++|.-.........-.. -...+++... |.+++.||+|.-.
T Consensus 227 ~D~veaa~~~v~~Lr---~~GaDvIIaLsH~G~~~d~~~~~~en-a~~~l~~v~g-ID~IlgGHsH~~~ 290 (780)
T PRK09418 227 KDIVETAKKMVPKMK---AEGADVIVALAHSGVDKSGYNVGMEN-ASYYLTEVPG-VDAVLMGHSHTEV 290 (780)
T ss_pred CCHHHHHHHHHHHHH---hcCCCEEEEEeccCcccccccccchh-hhHHHhcCCC-CCEEEECCCCCcc
Confidence 356554433333444 333 5677789997654322211111 1111355543 8999999999963
No 96
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=24.67 E-value=42 Score=34.60 Aligned_cols=14 Identities=21% Similarity=0.480 Sum_probs=11.9
Q ss_pred eeEEEecccCCCCC
Q psy16143 285 ISIIQLTDIHYDPK 298 (388)
Q Consensus 285 ~~vlhisD~H~D~~ 298 (388)
+||+|+||+|+...
T Consensus 1 mkilh~SDlHlG~~ 14 (407)
T PRK10966 1 MRILHTSDWHLGQN 14 (407)
T ss_pred CEEEEEcccCCCCc
Confidence 58999999999754
No 97
>PRK10425 DNase TatD; Provisional
Probab=24.24 E-value=1.5e+02 Score=28.49 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=30.2
Q ss_pred ChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhh
Q psy16143 26 DPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRF 76 (388)
Q Consensus 26 DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry 76 (388)
+...|.++|+.||+-|++-+..|+ -|.+ .. . +...+|+++|
T Consensus 102 ~~~~Q~~vF~~ql~lA~~~~~Pv~--iH~r-~a---~----~~~l~iL~~~ 142 (258)
T PRK10425 102 TPEEQERAFVAQLAIAAELNMPVF--MHCR-DA---H----ERFMALLEPW 142 (258)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeE--EEEe-Cc---h----HHHHHHHHHh
Confidence 456899999999999999877764 4766 11 1 4566778776
No 98
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=24.04 E-value=97 Score=27.34 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=11.3
Q ss_pred eEEEeecccCCcee
Q psy16143 81 AAEFNGHTHYEDIT 94 (388)
Q Consensus 81 ~~~ffGH~H~D~f~ 94 (388)
...++||||.-...
T Consensus 127 d~vi~GHtH~~~~~ 140 (168)
T cd07390 127 SWNLHGHIHSNSPD 140 (168)
T ss_pred eEEEEeeeCCCCCC
Confidence 57899999987664
No 99
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=23.94 E-value=47 Score=35.00 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEEEccCCCCC--Cc----------hHHH------HHHHHHHHHhhccceeEEEeecccC
Q psy16143 29 DQLSWLASTLLEAEKSNEKVHILSHIPPGSE--DT----------MQVF------QREYRKIINRFEYTIAAEFNGHTHY 90 (388)
Q Consensus 29 ~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~--d~----------~~~~------~~~y~~iv~ry~~~I~~~ffGH~H~ 90 (388)
.|.+||.++|..+++. +-+|..-||.|.- +. ...| +++++++|+...-.-.-.+.|-+|.
T Consensus 340 ~QeqWLk~~L~~Skat--WnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 340 QQEQWLKRGLGASKAT--WNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHY 417 (522)
T ss_pred HHHHHHHhhhhhcchh--hhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHH
Confidence 6999999999998763 6666777776652 11 1123 5788899988763224677887776
Q ss_pred CceeeeecCCC--CCccceeeeecccccc
Q psy16143 91 EDITIFYDKNN--SSRATNVAYNGGSITS 117 (388)
Q Consensus 91 D~f~i~~~~~~--~~~~~~~~~~~Psvtp 117 (388)
---.-++.... .......-|++.||+.
T Consensus 418 ~wA~~l~~d~a~~~~~~~f~Efv~tsi~s 446 (522)
T COG3540 418 SWAHDLDPDFAQFEDFAPFWEFVSTSINS 446 (522)
T ss_pred HHHhhcCcchhcccccCceeeEeeccCcC
Confidence 43332222111 1233455677777765
No 100
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=23.55 E-value=45 Score=32.72 Aligned_cols=19 Identities=37% Similarity=0.461 Sum_probs=16.4
Q ss_pred CCCceeEEEecccCCCCCc
Q psy16143 281 SGDEISIIQLTDIHYDPKY 299 (388)
Q Consensus 281 ~~~~~~vlhisD~H~D~~Y 299 (388)
+...++|+||||+|..+..
T Consensus 41 ~~~~~~iv~lSDlH~~~~~ 59 (284)
T COG1408 41 SLQGLKIVQLSDLHSLPFR 59 (284)
T ss_pred ccCCeEEEEeehhhhchhh
Confidence 4456889999999999988
No 101
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Probab=23.52 E-value=1.5e+02 Score=30.40 Aligned_cols=62 Identities=13% Similarity=0.238 Sum_probs=44.4
Q ss_pred CCCChhhHHHHHHHHHHHHHHCCCeEEEEE----ccCCCCCCchHHHHHHHHHHHHhhccceeEEEeeccc
Q psy16143 23 YPVDPNDQLSWLASTLLEAEKSNEKVHILS----HIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTH 89 (388)
Q Consensus 23 ~~~DP~~Ql~WL~~~L~~A~~~~~kV~Iig----HiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H 89 (388)
+...+..+++||++.+... ++|.|.. .+|+.. .....|.+...+++.+....+...|.||..
T Consensus 104 ~~~s~~~R~~~l~~~~~~~----~~v~v~~~~~~~~~~~~-~~~~~w~~~v~~~v~~~~~~~~~vf~~~~~ 169 (399)
T PRK08099 104 QQPTVSDRLRWLLQTFKYQ----KNIKIHAFNEEGMEPYP-HGWDVWSNGIKAFMAEKGIQPDVIYTSEEQ 169 (399)
T ss_pred CCCCHHHHHHHHHHHhCCC----CCEEEEecCCCCCCCCC-ccHHHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3455679999999888553 2566654 666554 356779999998898765456778999875
No 102
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=22.96 E-value=97 Score=27.98 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=13.5
Q ss_pred eeEEEeecccCCceee
Q psy16143 80 IAAEFNGHTHYEDITI 95 (388)
Q Consensus 80 I~~~ffGH~H~D~f~i 95 (388)
+...++||+|......
T Consensus 190 ~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 190 VDGVICGHTHRPALHE 205 (217)
T ss_pred CCEEEECCCCCCCeEE
Confidence 6789999999987653
No 103
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=22.79 E-value=1.9e+02 Score=27.39 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=45.3
Q ss_pred CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCCceeeeecCCCCCccceeeeecccccccCCCCCce
Q psy16143 46 EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYEDITIFYDKNNSSRATNVAYNGGSITSYYNVNPNY 125 (388)
Q Consensus 46 ~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~i~~~~~~~~~~~~~~~~~Psvtp~~~~NP~f 125 (388)
.-|+++.|..-.... ..|.. .+|.++.. -|..+|.||+|.-.-... ...+ ....+.+. .++..=|.
T Consensus 173 D~iIvl~H~G~~~~~--~~~~~--~~la~~~~-giDvIigGH~H~~~~~~~-~~~~-----~~~ivq~g---~~g~~vg~ 238 (257)
T cd07408 173 DVIVALGHLGVDRTS--SPWTS--TELAANVT-GIDLIIDGHSHTTIEIGK-KDGN-----NVLLTQTG---AYLANIGE 238 (257)
T ss_pred CEEEEEeCcCcCCCC--CCccH--HHHHHhCC-CceEEEeCCCcccccCcc-cccC-----CeEEEcCC---hHHceEEE
Confidence 567788998755431 12221 34455555 488999999998643210 0001 11111111 23445666
Q ss_pred EEEEEeCCeeEEeeEEE
Q psy16143 126 RLYKVARGTWEVTDFDS 142 (388)
Q Consensus 126 Rvy~~d~~t~~v~d~~~ 142 (388)
--+++|..+.+++...|
T Consensus 239 l~l~~~~~~~~~~~~~~ 255 (257)
T cd07408 239 VTLVFDTTTGTIKLISQ 255 (257)
T ss_pred EEEEEECCCceEEEecc
Confidence 66778888777776654
No 104
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=22.72 E-value=3.6e+02 Score=23.06 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=33.3
Q ss_pred CChhhHHHHHHHHHHHHHH--CCCeEEEEEccCCCC-CCchHHHHHHHHHHHHhh
Q psy16143 25 VDPNDQLSWLASTLLEAEK--SNEKVHILSHIPPGS-EDTMQVFQREYRKIINRF 76 (388)
Q Consensus 25 ~DP~~Ql~WL~~~L~~A~~--~~~kV~IigHiPpg~-~d~~~~~~~~y~~iv~ry 76 (388)
.+|..-.+-|++-++.+++ .+.+|++++-.|.+. .........+|.++++++
T Consensus 65 ~~~~~~~~~l~~li~~~~~~~~~~~vi~~~~~p~~~~~~~~~~~~~~~n~~l~~~ 119 (169)
T cd01828 65 TSDEDIVANYRTILEKLRKHFPNIKIVVQSILPVGELKSIPNEQIEELNRQLAQL 119 (169)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCcCccCcCCHHHHHHHHHHHHHH
Confidence 4666777888888998888 788999988666542 112222334455555444
No 105
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=21.96 E-value=49 Score=31.11 Aligned_cols=14 Identities=21% Similarity=0.705 Sum_probs=11.5
Q ss_pred eeEEEecccCCCCC
Q psy16143 285 ISIIQLTDIHYDPK 298 (388)
Q Consensus 285 ~~vlhisD~H~D~~ 298 (388)
.+++||||+|+...
T Consensus 1 M~i~~iSDlHl~~~ 14 (241)
T PRK05340 1 MPTLFISDLHLSPE 14 (241)
T ss_pred CcEEEEeecCCCCC
Confidence 37899999998753
No 106
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=21.83 E-value=1.2e+02 Score=23.09 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=24.2
Q ss_pred eeecccccccCCCCC-------ceEEEEEeCCeeEEeeEEEEeec
Q psy16143 109 AYNGGSITSYYNVNP-------NYRLYKVARGTWEVTDFDSYTYN 146 (388)
Q Consensus 109 ~~~~Psvtp~~~~NP-------~fRvy~~d~~t~~v~d~~~Y~~d 146 (388)
....++++|+..|-= -++||.||++|.+|.=-+.+++|
T Consensus 18 ~~~ts~m~ql~~N~Fav~~e~~~iKIfkyd~~tNei~L~KE~~~d 62 (63)
T PF14157_consen 18 EPNTSNMTQLEHNHFAVVDEDGQIKIFKYDEDTNEITLKKEFYAD 62 (63)
T ss_dssp ----EEEEE-STTEEEEE-ETTEEEEEEEETTTTEEEEEEEEEHH
T ss_pred ccCcCceEEecCCEEEEEecCCeEEEEEeCCCCCeEEEEEeeecC
Confidence 344556666554433 34699999999999888888775
No 107
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=21.83 E-value=5e+02 Score=22.07 Aligned_cols=48 Identities=17% Similarity=0.319 Sum_probs=28.3
Q ss_pred ChhhHHHHHHHHHHHHHHCCCeEEEEEc-cCCCCCCchHHHHHHHHHHHHhh
Q psy16143 26 DPNDQLSWLASTLLEAEKSNEKVHILSH-IPPGSEDTMQVFQREYRKIINRF 76 (388)
Q Consensus 26 DP~~Ql~WL~~~L~~A~~~~~kV~IigH-iPpg~~d~~~~~~~~y~~iv~ry 76 (388)
++..-.+=|++-++.+++++.+|++++= .||... ..|..+|.+++++.
T Consensus 82 ~~~~~~~~l~~li~~~~~~~~~vil~~~~~~~~~~---~~~~~~~~~~~~~~ 130 (177)
T cd01822 82 PPDQTRANLRQMIETAQARGAPVLLVGMQAPPNYG---PRYTRRFAAIYPEL 130 (177)
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccc---hHHHHHHHHHHHHH
Confidence 4555556677777778888889888864 344321 23444555555443
No 108
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=21.68 E-value=4.4e+02 Score=25.37 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCChhhHHHHHHHHHHHHHHCCCeEEEEEccCCCCCCchHHHHHHHHHHHHhh-ccceeEEEeecccCC
Q psy16143 24 PVDPNDQLSWLASTLLEAEKSNEKVHILSHIPPGSEDTMQVFQREYRKIINRF-EYTIAAEFNGHTHYE 91 (388)
Q Consensus 24 ~~DP~~Ql~WL~~~L~~A~~~~~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry-~~~I~~~ffGH~H~D 91 (388)
..+|...++ +.++++++.-.-|++..|.-... + ..-+.+| ...|.+++-||+|.-
T Consensus 123 ~~~P~~~~~---~~v~~lk~~~D~IIV~~H~g~ts--------E--k~ala~~ldg~VdvIvGtHTHv~ 178 (255)
T cd07382 123 LDNPFRAAD---ELLEELKEEADIIFVDFHAEATS--------E--KIALGWYLDGRVSAVVGTHTHVQ 178 (255)
T ss_pred CCCHHHHHH---HHHHHHhcCCCEEEEEECCCCCH--------H--HHHHHHhCCCCceEEEeCCCCcc
Confidence 346765544 44444444345777789984311 0 1112233 335899999999986
No 109
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=21.00 E-value=1.8e+02 Score=32.01 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=33.2
Q ss_pred ChhhHHHHHHHHHHHHHHCC-CeEEEEEccCCCCCCchHHHHHHHHHHHHhhccceeEEEeecccCC
Q psy16143 26 DPNDQLSWLASTLLEAEKSN-EKVHILSHIPPGSEDTMQVFQREYRKIINRFEYTIAAEFNGHTHYE 91 (388)
Q Consensus 26 DP~~Ql~WL~~~L~~A~~~~-~kV~IigHiPpg~~d~~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D 91 (388)
||-.. +++...+.|++| .-|+++.|...........-.+.- ..+++... |.+++.||+|..
T Consensus 202 D~ve~---a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~aen~~-~~l~~v~g-ID~Il~GHsH~~ 263 (649)
T PRK09420 202 DITET---ARKYVPEMKEKGADIVVAIPHSGISADPYKAMAENSV-YYLSEVPG-IDAIMFGHSHAV 263 (649)
T ss_pred CHHHH---HHHHHHHHHHcCCCEEEEEecCCcCCCCccccccchh-HHHhcCCC-CCEEEeCCCCcc
Confidence 55443 444444444444 567778999765422111111111 12355543 899999999995
No 110
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=20.62 E-value=1.8e+02 Score=27.65 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=34.1
Q ss_pred HHHHHHHHCCCeEEEEEccCCCCCCc----hHHHHHHHHHHHHhhccceeEEEeecccCCcee
Q psy16143 36 STLLEAEKSNEKVHILSHIPPGSEDT----MQVFQREYRKIINRFEYTIAAEFNGHTHYEDIT 94 (388)
Q Consensus 36 ~~L~~A~~~~~kV~IigHiPpg~~d~----~~~~~~~y~~iv~ry~~~I~~~ffGH~H~D~f~ 94 (388)
+.+++|.++|-. +|+.|||+..... ...+..++ ..+.+.. ...+.-||..|...
T Consensus 48 ~vi~~Ai~~~~d-lIitHHP~~f~~~~~~~~~~~~~~~-~~li~~~---I~vy~~Ht~lD~~~ 105 (249)
T TIGR00486 48 SVADEAVRLGAD-LIITHHPLIWKPLKRLIRGIKPGRL-KILLQND---ISLYSAHTNLDAHD 105 (249)
T ss_pred HHHHHHHHCCCC-EEEEcCccccCCcccccCCCHHHHH-HHHHHCC---CeEEEeecchhcCC
Confidence 567778766443 6789999976421 12344453 3344454 47889999999653
Done!