Query psy16144
Match_columns 122
No_of_seqs 102 out of 119
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 21:57:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 5.8E-16 2E-20 106.4 13.2 94 18-112 16-121 (126)
2 3gyz_A Chaperone protein IPGC; 99.7 8.4E-16 2.9E-20 110.3 12.1 90 16-106 37-138 (151)
3 4ga2_A E3 SUMO-protein ligase 99.6 1.1E-15 3.7E-20 107.2 10.3 87 22-109 40-137 (150)
4 2vgx_A Chaperone SYCD; alterna 99.6 2.6E-15 9E-20 105.5 12.0 103 16-120 22-136 (148)
5 2xcb_A PCRH, regulatory protei 99.6 3.7E-15 1.3E-19 102.4 11.8 101 17-119 20-132 (142)
6 1hxi_A PEX5, peroxisome target 99.6 4.5E-15 1.5E-19 101.1 9.5 91 17-108 19-121 (121)
7 3upv_A Heat shock protein STI1 99.6 2.4E-14 8.3E-19 95.3 12.5 102 17-120 6-125 (126)
8 3urz_A Uncharacterized protein 99.6 2.5E-14 8.5E-19 104.4 11.8 96 15-111 4-127 (208)
9 1elw_A TPR1-domain of HOP; HOP 99.6 1.2E-13 4.1E-18 87.9 12.0 97 15-112 4-112 (118)
10 3sz7_A HSC70 cochaperone (SGT) 99.5 7.7E-14 2.6E-18 97.2 11.8 92 16-108 12-115 (164)
11 3rkv_A Putative peptidylprolyl 99.5 1.7E-13 5.9E-18 95.2 11.3 101 10-111 6-137 (162)
12 3vtx_A MAMA; tetratricopeptide 99.5 2E-13 6.7E-18 95.5 11.6 58 53-111 89-146 (184)
13 2lni_A Stress-induced-phosphop 99.5 4.3E-13 1.5E-17 87.5 11.7 97 15-112 16-124 (133)
14 2dba_A Smooth muscle cell asso 99.5 8.7E-13 3E-17 87.7 12.9 95 17-112 30-139 (148)
15 2pl2_A Hypothetical conserved 99.5 3.1E-13 1.1E-17 99.1 11.7 92 18-110 8-122 (217)
16 2xev_A YBGF; tetratricopeptide 99.5 6.1E-13 2.1E-17 87.6 11.7 88 22-110 11-114 (129)
17 2vyi_A SGTA protein; chaperone 99.5 1.5E-12 5.3E-17 83.9 13.1 95 17-112 14-120 (131)
18 3k9i_A BH0479 protein; putativ 99.5 1.1E-13 3.6E-18 92.3 7.7 85 25-110 2-99 (117)
19 4gcn_A Protein STI-1; structur 99.5 5.1E-13 1.8E-17 91.3 11.2 94 17-112 10-122 (127)
20 3q49_B STIP1 homology and U bo 99.5 7.7E-13 2.6E-17 87.9 11.4 95 18-113 12-123 (137)
21 1a17_A Serine/threonine protei 99.5 2.3E-12 7.8E-17 87.2 13.7 98 11-109 9-118 (166)
22 1na0_A Designed protein CTPR3; 99.4 3.5E-12 1.2E-16 81.5 13.0 94 18-112 12-117 (125)
23 2fbn_A 70 kDa peptidylprolyl i 99.4 2.9E-12 9.8E-17 91.6 13.5 103 9-112 32-162 (198)
24 4ga2_A E3 SUMO-protein ligase 99.4 2.1E-13 7E-18 95.5 7.3 90 22-112 6-105 (150)
25 3vtx_A MAMA; tetratricopeptide 99.4 6E-13 2E-17 93.0 9.2 86 22-108 82-177 (184)
26 2pl2_A Hypothetical conserved 99.4 7.8E-13 2.7E-17 97.0 9.9 93 18-112 76-191 (217)
27 1elr_A TPR2A-domain of HOP; HO 99.4 3E-12 1E-16 82.7 11.1 94 16-111 5-117 (131)
28 4gyw_A UDP-N-acetylglucosamine 99.4 1.5E-12 5E-17 114.1 12.3 89 22-111 52-150 (723)
29 2kck_A TPR repeat; tetratricop 99.4 1.5E-12 5.1E-17 82.3 8.2 84 22-106 15-111 (112)
30 4gyw_A UDP-N-acetylglucosamine 99.4 2.3E-12 8E-17 112.8 12.3 93 18-111 12-116 (723)
31 4i17_A Hypothetical protein; T 99.4 6.8E-12 2.3E-16 90.6 11.9 87 22-109 16-113 (228)
32 4i17_A Hypothetical protein; T 99.4 4.2E-12 1.4E-16 91.7 9.7 88 22-110 51-157 (228)
33 1p5q_A FKBP52, FK506-binding p 99.3 1.3E-11 4.5E-16 97.0 12.7 96 16-112 148-270 (336)
34 3uq3_A Heat shock protein STI1 99.3 1.8E-11 6.2E-16 87.4 11.7 90 22-112 148-253 (258)
35 1zu2_A Mitochondrial import re 99.3 4.7E-12 1.6E-16 93.8 8.8 84 26-110 15-129 (158)
36 1xnf_A Lipoprotein NLPI; TPR, 99.3 2.2E-11 7.4E-16 88.3 12.1 89 18-107 46-146 (275)
37 2e2e_A Formate-dependent nitri 99.3 1.2E-11 4E-16 86.3 10.1 92 17-109 46-152 (177)
38 2h6f_A Protein farnesyltransfe 99.3 7.3E-12 2.5E-16 101.6 10.2 87 22-109 140-237 (382)
39 2hr2_A Hypothetical protein; a 99.3 1.7E-12 5.8E-17 96.2 5.9 99 14-112 10-142 (159)
40 2h6f_A Protein farnesyltransfe 99.3 3.9E-12 1.3E-16 103.2 8.5 92 18-110 100-204 (382)
41 2fo7_A Synthetic consensus TPR 99.3 4.3E-11 1.5E-15 76.7 11.6 89 22-111 10-108 (136)
42 3mkr_A Coatomer subunit epsilo 99.3 2.4E-11 8.3E-16 93.7 12.3 89 22-111 139-239 (291)
43 3as5_A MAMA; tetratricopeptide 99.3 6E-11 2E-15 80.3 12.3 89 22-111 51-149 (186)
44 3gyz_A Chaperone protein IPGC; 99.3 1.5E-12 5.2E-17 93.2 4.4 79 32-111 21-109 (151)
45 2q7f_A YRRB protein; TPR, prot 99.3 2.3E-11 8E-16 86.6 10.5 87 22-109 134-230 (243)
46 1hh8_A P67PHOX, NCF-2, neutrop 99.3 3.2E-11 1.1E-15 85.5 10.4 85 22-107 46-156 (213)
47 3uq3_A Heat shock protein STI1 99.3 9.3E-11 3.2E-15 83.7 12.8 89 22-111 88-212 (258)
48 3qou_A Protein YBBN; thioredox 99.3 1.8E-11 6E-16 93.8 9.3 91 22-113 126-262 (287)
49 2r5s_A Uncharacterized protein 99.3 2E-11 6.9E-16 86.1 8.8 93 18-112 43-150 (176)
50 1ihg_A Cyclophilin 40; ppiase 99.3 7.9E-11 2.7E-15 94.6 12.9 101 11-112 219-347 (370)
51 2e2e_A Formate-dependent nitri 99.3 1.4E-11 4.9E-16 85.9 7.5 88 23-111 20-120 (177)
52 1w3b_A UDP-N-acetylglucosamine 99.3 5.9E-11 2E-15 91.4 11.6 87 22-109 178-274 (388)
53 3ieg_A DNAJ homolog subfamily 99.2 1.6E-10 5.6E-15 85.7 13.3 96 22-119 243-352 (359)
54 2q7f_A YRRB protein; TPR, prot 99.2 1.4E-10 4.7E-15 82.6 12.3 87 22-109 66-162 (243)
55 2vsy_A XCC0866; transferase, g 99.2 6.5E-11 2.2E-15 97.5 11.6 94 18-112 26-131 (568)
56 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 8.5E-11 2.9E-15 96.2 12.3 96 15-111 268-390 (457)
57 3urz_A Uncharacterized protein 99.2 6.9E-11 2.3E-15 86.0 10.4 84 22-106 63-191 (208)
58 3as5_A MAMA; tetratricopeptide 99.2 1E-10 3.4E-15 79.2 10.5 90 22-112 17-116 (186)
59 3qky_A Outer membrane assembly 99.2 1.1E-10 3.9E-15 86.1 11.7 92 18-110 18-135 (261)
60 3ieg_A DNAJ homolog subfamily 99.2 8E-11 2.7E-15 87.4 10.8 95 17-112 5-114 (359)
61 1fch_A Peroxisomal targeting s 99.2 7.9E-11 2.7E-15 88.9 10.6 83 22-105 226-318 (368)
62 2if4_A ATFKBP42; FKBP-like, al 99.2 5.3E-11 1.8E-15 93.8 10.0 101 11-112 175-304 (338)
63 2fo7_A Synthetic consensus TPR 99.2 1.5E-10 5.1E-15 74.1 10.4 83 22-105 44-136 (136)
64 4eqf_A PEX5-related protein; a 99.2 2.8E-11 9.4E-16 92.4 8.1 92 18-110 68-171 (365)
65 1w3b_A UDP-N-acetylglucosamine 99.2 7.3E-11 2.5E-15 90.9 10.5 88 22-110 42-139 (388)
66 3mkr_A Coatomer subunit epsilo 99.2 1.2E-10 4E-15 89.9 11.6 87 22-109 175-272 (291)
67 2c2l_A CHIP, carboxy terminus 99.2 3.5E-11 1.2E-15 92.0 8.4 88 18-106 7-106 (281)
68 2vgx_A Chaperone SYCD; alterna 99.2 3.1E-11 1.1E-15 84.5 7.2 80 31-111 5-94 (148)
69 1wao_1 Serine/threonine protei 99.2 8.8E-11 3E-15 97.1 10.8 89 22-111 15-113 (477)
70 2y4t_A DNAJ homolog subfamily 99.2 2.1E-10 7.2E-15 89.1 12.3 96 16-112 27-137 (450)
71 4eqf_A PEX5-related protein; a 99.2 1.1E-10 3.8E-15 89.0 10.4 89 22-111 186-286 (365)
72 3hym_B Cell division cycle pro 99.2 2.5E-10 8.4E-15 84.3 11.4 90 22-112 99-199 (330)
73 1fch_A Peroxisomal targeting s 99.2 1.9E-10 6.4E-15 86.9 10.9 91 18-109 67-169 (368)
74 3hym_B Cell division cycle pro 99.2 9.6E-11 3.3E-15 86.5 9.0 94 18-112 196-310 (330)
75 2vq2_A PILW, putative fimbrial 99.2 4.4E-10 1.5E-14 78.6 11.9 78 22-100 17-105 (225)
76 3qky_A Outer membrane assembly 99.2 6E-10 2.1E-14 82.2 12.9 85 22-107 61-183 (261)
77 4abn_A Tetratricopeptide repea 99.2 2.1E-10 7E-15 94.0 11.3 88 22-111 111-218 (474)
78 3cv0_A Peroxisome targeting si 99.2 2.7E-10 9.4E-15 83.9 10.8 82 22-104 181-272 (327)
79 2xcb_A PCRH, regulatory protei 99.2 1.4E-10 4.9E-15 79.3 8.3 78 33-111 4-91 (142)
80 2ho1_A Type 4 fimbrial biogene 99.2 4.1E-10 1.4E-14 81.2 11.1 87 22-109 46-144 (252)
81 1hh8_A P67PHOX, NCF-2, neutrop 99.1 4.8E-10 1.6E-14 79.4 11.0 81 22-106 15-105 (213)
82 2vq2_A PILW, putative fimbrial 99.1 7.2E-10 2.5E-14 77.5 11.8 88 22-110 85-186 (225)
83 2pzi_A Probable serine/threoni 99.1 2.1E-11 7.3E-16 104.4 4.6 86 22-109 442-537 (681)
84 4gco_A Protein STI-1; structur 99.1 2.7E-10 9.1E-15 77.9 9.1 72 38-110 5-85 (126)
85 4abn_A Tetratricopeptide repea 99.1 2.9E-10 1E-14 93.1 10.9 93 18-111 173-297 (474)
86 2ho1_A Type 4 fimbrial biogene 99.1 7.4E-10 2.5E-14 79.8 11.8 88 22-110 114-213 (252)
87 2kat_A Uncharacterized protein 99.1 3.2E-10 1.1E-14 74.4 9.0 82 30-112 2-95 (115)
88 2pzi_A Probable serine/threoni 99.1 7.1E-11 2.4E-15 101.2 7.3 91 18-110 470-572 (681)
89 3fp2_A TPR repeat-containing p 99.1 7.2E-10 2.5E-14 87.7 12.2 88 22-110 285-382 (537)
90 2yhc_A BAMD, UPF0169 lipoprote 99.1 3.3E-10 1.1E-14 82.9 9.5 92 17-109 6-133 (225)
91 3u4t_A TPR repeat-containing p 99.1 4.1E-10 1.4E-14 81.8 9.8 87 22-110 46-146 (272)
92 3cv0_A Peroxisome targeting si 99.1 5.1E-10 1.7E-14 82.5 10.4 90 22-112 30-129 (327)
93 2y4t_A DNAJ homolog subfamily 99.1 1.1E-09 3.7E-14 85.0 12.6 90 22-112 266-369 (450)
94 2xpi_A Anaphase-promoting comp 99.1 9.7E-10 3.3E-14 88.5 12.5 93 18-111 478-589 (597)
95 2gw1_A Mitochondrial precursor 99.1 1.3E-09 4.5E-14 85.3 12.9 99 16-116 7-117 (514)
96 3u4t_A TPR repeat-containing p 99.1 4.9E-10 1.7E-14 81.5 9.1 87 22-110 83-180 (272)
97 1xnf_A Lipoprotein NLPI; TPR, 99.1 5.2E-10 1.8E-14 81.0 9.1 90 22-112 14-117 (275)
98 2xpi_A Anaphase-promoting comp 99.0 2.9E-09 9.9E-14 85.7 12.2 95 17-112 375-481 (597)
99 2yhc_A BAMD, UPF0169 lipoprote 99.0 3.4E-09 1.2E-13 77.5 11.5 86 22-108 50-183 (225)
100 2vsy_A XCC0866; transferase, g 99.0 2E-09 6.8E-14 88.6 11.0 88 18-106 60-162 (568)
101 3fp2_A TPR repeat-containing p 99.0 3.9E-09 1.3E-13 83.5 12.2 88 22-111 252-349 (537)
102 2gw1_A Mitochondrial precursor 99.0 2.8E-09 9.7E-14 83.4 10.2 56 53-109 431-486 (514)
103 3upv_A Heat shock protein STI1 98.9 6E-09 2.1E-13 68.8 9.3 58 53-111 20-77 (126)
104 1na3_A Designed protein CTPR2; 98.9 8E-09 2.7E-13 63.7 9.3 58 53-111 25-82 (91)
105 3qou_A Protein YBBN; thioredox 98.9 2E-09 7E-14 82.2 7.5 67 38-105 109-184 (287)
106 2kc7_A BFR218_protein; tetratr 98.9 7.1E-10 2.4E-14 70.5 4.2 56 53-109 16-72 (99)
107 1a17_A Serine/threonine protei 98.9 1.1E-08 3.8E-13 68.8 10.0 80 22-102 56-147 (166)
108 1qqe_A Vesicular transport pro 98.9 3.5E-09 1.2E-13 80.5 8.4 91 18-109 120-236 (292)
109 1p5q_A FKBP52, FK506-binding p 98.9 3.7E-09 1.3E-13 82.9 8.6 90 17-107 198-300 (336)
110 2l6j_A TPR repeat-containing p 98.9 3.2E-10 1.1E-14 72.3 1.8 52 53-105 20-71 (111)
111 4g1t_A Interferon-induced prot 98.9 6.8E-09 2.3E-13 81.4 9.4 85 26-111 188-286 (472)
112 2ond_A Cleavage stimulation fa 98.9 1.6E-08 5.6E-13 77.0 10.9 88 22-110 108-207 (308)
113 2kc7_A BFR218_protein; tetratr 98.9 1.8E-08 6.1E-13 63.9 9.4 77 22-107 9-96 (99)
114 3q49_B STIP1 homology and U bo 98.9 1.6E-08 5.4E-13 66.8 9.4 58 53-111 25-82 (137)
115 4gcn_A Protein STI-1; structur 98.9 2.8E-09 9.5E-14 72.5 5.8 55 53-108 24-78 (127)
116 3ma5_A Tetratricopeptide repea 98.9 2.4E-09 8.1E-14 69.9 5.2 66 41-107 2-76 (100)
117 2l6j_A TPR repeat-containing p 98.9 1.3E-08 4.3E-13 64.8 8.4 81 16-97 5-103 (111)
118 3sz7_A HSC70 cochaperone (SGT) 98.9 1.6E-08 5.3E-13 70.0 9.4 58 53-111 27-84 (164)
119 2kck_A TPR repeat; tetratricop 98.9 1.3E-08 4.3E-13 63.9 8.1 58 53-111 22-81 (112)
120 3edt_B KLC 2, kinesin light ch 98.9 1.1E-08 3.8E-13 73.3 8.8 84 18-101 46-156 (283)
121 4g1t_A Interferon-induced prot 98.9 1.2E-08 4E-13 80.1 9.5 84 22-106 256-368 (472)
122 3nf1_A KLC 1, kinesin light ch 98.8 1.5E-08 5E-13 74.1 9.2 83 22-104 162-310 (311)
123 2ond_A Cleavage stimulation fa 98.8 1.4E-08 4.8E-13 77.4 9.1 85 25-110 69-172 (308)
124 1hxi_A PEX5, peroxisome target 98.8 2.3E-08 8E-13 67.5 9.0 58 53-111 33-90 (121)
125 1qqe_A Vesicular transport pro 98.8 1.7E-08 5.7E-13 76.8 9.1 85 22-107 86-193 (292)
126 2r5s_A Uncharacterized protein 98.8 3.4E-09 1.2E-13 74.5 4.7 88 22-111 15-113 (176)
127 1na3_A Designed protein CTPR2; 98.8 4.3E-08 1.5E-12 60.3 8.9 69 17-86 11-91 (91)
128 1wao_1 Serine/threonine protei 98.8 2.6E-09 8.8E-14 88.2 3.8 87 18-105 43-154 (477)
129 2if4_A ATFKBP42; FKBP-like, al 98.8 4.6E-09 1.6E-13 82.6 4.3 92 18-110 233-337 (338)
130 3nf1_A KLC 1, kinesin light ch 98.8 9.9E-08 3.4E-12 69.6 10.9 88 15-102 27-141 (311)
131 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 3.8E-09 1.3E-13 86.3 3.6 85 25-110 246-355 (457)
132 3edt_B KLC 2, kinesin light ch 98.7 4.1E-08 1.4E-12 70.3 8.5 86 18-103 88-200 (283)
133 3k9i_A BH0479 protein; putativ 98.7 7.8E-09 2.7E-13 68.3 3.3 59 53-111 6-66 (117)
134 1elw_A TPR1-domain of HOP; HOP 98.7 1.5E-07 5E-12 59.2 8.8 59 53-112 20-78 (118)
135 2vyi_A SGTA protein; chaperone 98.7 1.5E-07 5.1E-12 60.0 8.8 58 53-111 28-85 (131)
136 2lni_A Stress-induced-phosphop 98.7 9.3E-08 3.2E-12 61.7 7.9 59 53-112 32-90 (133)
137 2fbn_A 70 kDa peptidylprolyl i 98.7 9.1E-08 3.1E-12 68.0 8.0 83 22-105 97-190 (198)
138 3rkv_A Putative peptidylprolyl 98.7 8.4E-08 2.9E-12 66.1 7.5 58 53-110 27-101 (162)
139 2ifu_A Gamma-SNAP; membrane fu 98.6 1E-07 3.5E-12 72.9 8.2 85 22-109 125-231 (307)
140 2hr2_A Hypothetical protein; a 98.6 7.2E-08 2.5E-12 71.2 7.0 56 53-109 27-101 (159)
141 2dba_A Smooth muscle cell asso 98.6 1.9E-07 6.4E-12 61.5 8.4 58 53-111 44-104 (148)
142 3bee_A Putative YFRE protein; 98.6 8.1E-08 2.8E-12 63.9 6.5 55 53-108 25-79 (93)
143 1na0_A Designed protein CTPR3; 98.6 4.9E-07 1.7E-11 57.1 9.4 58 53-111 25-82 (125)
144 2ooe_A Cleavage stimulation fa 98.6 4.1E-07 1.4E-11 74.0 11.2 89 22-111 330-430 (530)
145 3ro2_A PINS homolog, G-protein 98.6 1.5E-07 5.2E-12 68.4 7.8 90 16-105 6-116 (338)
146 2kat_A Uncharacterized protein 98.6 2E-07 6.7E-12 60.8 7.6 57 54-111 2-58 (115)
147 2xev_A YBGF; tetratricopeptide 98.6 4.1E-07 1.4E-11 59.2 9.0 53 53-106 18-73 (129)
148 3n71_A Histone lysine methyltr 98.6 1.8E-06 6E-11 72.7 14.8 89 22-110 318-436 (490)
149 4a1s_A PINS, partner of inscut 98.6 1.7E-07 5.8E-12 72.0 7.7 87 16-102 49-156 (411)
150 4f3v_A ESX-1 secretion system 98.5 3.6E-07 1.2E-11 72.7 9.3 93 22-115 144-250 (282)
151 2qfc_A PLCR protein; TPR, HTH, 98.5 1.6E-06 5.6E-11 65.3 12.3 82 22-103 124-227 (293)
152 3ro3_A PINS homolog, G-protein 98.5 6E-07 2.1E-11 58.7 8.6 81 22-103 18-120 (164)
153 3ro3_A PINS homolog, G-protein 98.5 5.7E-07 2E-11 58.8 8.2 83 22-104 58-161 (164)
154 3ulq_A Response regulator aspa 98.5 4.3E-07 1.5E-11 70.3 8.6 82 22-103 193-295 (383)
155 2c2l_A CHIP, carboxy terminus 98.5 4.2E-07 1.4E-11 69.2 8.4 58 53-111 20-77 (281)
156 2ifu_A Gamma-SNAP; membrane fu 98.5 2.5E-07 8.5E-12 70.7 7.1 84 22-106 85-189 (307)
157 3ulq_A Response regulator aspa 98.5 4.8E-07 1.7E-11 70.0 8.8 87 22-109 152-267 (383)
158 1ouv_A Conserved hypothetical 98.5 1.9E-06 6.6E-11 63.3 11.4 72 26-102 55-144 (273)
159 1zu2_A Mitochondrial import re 98.5 4.6E-07 1.6E-11 66.9 7.8 57 53-110 18-84 (158)
160 3sf4_A G-protein-signaling mod 98.5 3.5E-07 1.2E-11 69.1 7.0 84 22-105 18-120 (406)
161 1elr_A TPR2A-domain of HOP; HO 98.5 5.6E-07 1.9E-11 57.5 6.9 52 53-105 20-71 (131)
162 2qfc_A PLCR protein; TPR, HTH, 98.5 4.5E-06 1.5E-10 62.8 13.0 87 22-109 84-195 (293)
163 2ooe_A Cleavage stimulation fa 98.4 5.1E-07 1.8E-11 73.4 7.6 85 22-107 365-460 (530)
164 3u3w_A Transcriptional activat 98.4 4.3E-07 1.5E-11 68.5 6.6 83 22-104 124-228 (293)
165 3q15_A PSP28, response regulat 98.4 1.5E-06 5.1E-11 67.4 9.6 83 22-104 191-293 (378)
166 3gw4_A Uncharacterized protein 98.4 2.4E-06 8.2E-11 59.1 9.7 93 22-114 75-191 (203)
167 3ro2_A PINS homolog, G-protein 98.4 6.1E-07 2.1E-11 65.1 6.7 50 53-103 279-334 (338)
168 1ihg_A Cyclophilin 40; ppiase 98.4 1.7E-06 5.8E-11 69.3 9.5 71 22-93 282-362 (370)
169 3gw4_A Uncharacterized protein 98.4 8.9E-07 3E-11 61.3 6.9 82 22-103 35-138 (203)
170 4a1s_A PINS, partner of inscut 98.4 7E-07 2.4E-11 68.5 6.9 82 22-104 232-335 (411)
171 2v5f_A Prolyl 4-hydroxylase su 98.4 2.3E-06 7.7E-11 56.7 8.5 58 53-110 21-84 (104)
172 3qww_A SET and MYND domain-con 98.4 2.5E-06 8.4E-11 70.8 10.5 89 22-110 307-425 (433)
173 3sf4_A G-protein-signaling mod 98.4 1.2E-06 4.3E-11 66.1 7.7 82 22-104 236-339 (406)
174 1ouv_A Conserved hypothetical 98.3 7.7E-06 2.6E-10 60.0 11.5 77 22-103 119-217 (273)
175 3q15_A PSP28, response regulat 98.3 3.3E-06 1.1E-10 65.5 9.2 88 22-109 150-264 (378)
176 3u3w_A Transcriptional activat 98.3 3E-06 1E-10 63.8 8.4 85 18-103 158-268 (293)
177 3rjv_A Putative SEL1 repeat pr 98.3 4.2E-06 1.4E-10 60.9 8.9 53 53-107 105-163 (212)
178 3qwp_A SET and MYND domain-con 98.3 8.2E-06 2.8E-10 67.3 11.0 98 23-120 297-426 (429)
179 3rjv_A Putative SEL1 repeat pr 98.2 1.2E-05 4.2E-10 58.4 10.3 80 22-103 94-199 (212)
180 1dce_A Protein (RAB geranylger 98.2 4.9E-06 1.7E-10 70.7 9.3 88 22-110 116-230 (567)
181 3ma5_A Tetratricopeptide repea 98.2 3.6E-06 1.2E-10 54.5 6.2 44 68-111 3-46 (100)
182 3dra_A Protein farnesyltransfe 98.2 2.7E-05 9.1E-10 61.9 12.2 87 22-109 42-147 (306)
183 3dss_A Geranylgeranyl transfer 98.2 2.4E-05 8.2E-10 63.2 11.9 88 22-110 117-231 (331)
184 1dce_A Protein (RAB geranylger 98.1 3.6E-05 1.2E-09 65.3 12.4 84 25-109 41-146 (567)
185 1pc2_A Mitochondria fission pr 98.1 1.9E-05 6.3E-10 58.0 9.1 58 53-110 51-109 (152)
186 3dss_A Geranylgeranyl transfer 98.1 6.3E-05 2.1E-09 60.7 12.3 86 23-109 39-147 (331)
187 3q7a_A Farnesyltransferase alp 98.1 3.2E-05 1.1E-09 63.0 10.6 87 22-109 63-162 (349)
188 1hz4_A MALT regulatory protein 98.0 1.5E-05 5.2E-10 60.8 7.8 83 22-104 62-167 (373)
189 4f3v_A ESX-1 secretion system 98.0 3.3E-06 1.1E-10 67.2 4.0 80 22-102 111-201 (282)
190 3dra_A Protein farnesyltransfe 98.0 6.7E-05 2.3E-09 59.5 10.6 82 27-109 124-223 (306)
191 1hz4_A MALT regulatory protein 97.9 0.00012 4.2E-09 55.8 10.2 82 22-103 102-205 (373)
192 2xm6_A Protein corresponding t 97.8 0.0001 3.4E-09 59.3 9.7 78 22-104 337-435 (490)
193 3u64_A Protein TP_0956; tetrat 97.8 4.9E-05 1.7E-09 61.4 7.4 78 29-107 179-276 (301)
194 3q7a_A Farnesyltransferase alp 97.8 9.9E-05 3.4E-09 60.2 8.8 81 28-109 140-245 (349)
195 3bee_A Putative YFRE protein; 97.7 7.2E-05 2.5E-09 49.4 6.0 52 22-74 16-79 (93)
196 3mv2_B Coatomer subunit epsilo 97.7 8.4E-05 2.9E-09 59.8 6.9 86 22-111 145-260 (310)
197 3e4b_A ALGK; tetratricopeptide 97.7 0.00024 8.3E-09 57.5 9.4 75 22-100 185-279 (452)
198 3n71_A Histone lysine methyltr 97.7 0.00032 1.1E-08 58.9 10.4 88 15-102 351-465 (490)
199 1klx_A Cysteine rich protein B 97.7 0.00057 1.9E-08 46.8 9.9 76 22-102 34-127 (138)
200 3ly7_A Transcriptional activat 97.6 0.00043 1.5E-08 57.2 9.8 53 53-107 293-345 (372)
201 3e4b_A ALGK; tetratricopeptide 97.6 0.00045 1.5E-08 55.9 9.6 76 27-111 231-323 (452)
202 4b4t_Q 26S proteasome regulato 97.5 0.00033 1.1E-08 54.0 8.3 80 22-101 64-164 (434)
203 2xm6_A Protein corresponding t 97.5 0.0016 5.4E-08 52.2 11.4 76 22-102 300-397 (490)
204 1klx_A Cysteine rich protein B 97.4 0.0018 6.2E-08 44.2 9.3 78 27-109 9-96 (138)
205 1xi4_A Clathrin heavy chain; a 97.1 0.0023 7.8E-08 61.1 9.9 67 22-98 1058-1131(1630)
206 1nzn_A CGI-135 protein, fissio 97.1 0.0014 4.9E-08 46.6 6.6 57 53-109 54-111 (126)
207 1b89_A Protein (clathrin heavy 97.1 0.00059 2E-08 57.6 5.1 52 53-118 138-189 (449)
208 2v5f_A Prolyl 4-hydroxylase su 97.0 0.0026 8.9E-08 41.6 7.2 57 22-79 14-87 (104)
209 3mv2_B Coatomer subunit epsilo 97.0 0.0066 2.3E-07 48.7 10.7 98 10-109 175-290 (310)
210 3ffl_A Anaphase-promoting comp 97.0 0.0012 4E-08 49.3 5.7 75 23-97 30-147 (167)
211 4b4t_Q 26S proteasome regulato 96.9 0.018 6.1E-07 44.2 12.1 91 22-112 104-218 (434)
212 3qww_A SET and MYND domain-con 96.8 0.0065 2.2E-07 50.2 9.6 61 53-113 314-386 (433)
213 3u64_A Protein TP_0956; tetrat 96.7 0.01 3.6E-07 47.8 9.2 55 53-108 179-241 (301)
214 1xi4_A Clathrin heavy chain; a 96.6 0.0036 1.2E-07 59.8 7.1 69 25-104 1088-1166(1630)
215 1y8m_A FIS1; mitochondria, unk 96.4 0.015 5E-07 42.4 7.9 57 53-109 58-114 (144)
216 1b89_A Protein (clathrin heavy 96.4 0.012 4.1E-07 49.6 8.4 42 71-112 206-247 (449)
217 3o48_A Mitochondria fission 1 96.4 0.0098 3.4E-07 42.9 6.7 56 53-109 59-115 (134)
218 4e6h_A MRNA 3'-END-processing 95.8 0.063 2.2E-06 46.8 10.3 90 22-111 387-509 (679)
219 3qwp_A SET and MYND domain-con 95.8 0.018 6.3E-07 47.1 6.5 62 53-114 303-376 (429)
220 3ly7_A Transcriptional activat 95.4 0.035 1.2E-06 45.7 6.7 56 22-81 286-351 (372)
221 4e6h_A MRNA 3'-END-processing 94.6 0.18 6.1E-06 44.0 9.3 84 29-113 48-146 (679)
222 1pc2_A Mitochondria fission pr 93.5 0.49 1.7E-05 34.3 8.5 49 53-102 14-65 (152)
223 3mkq_A Coatomer beta'-subunit; 93.5 0.14 4.9E-06 42.5 6.2 72 22-98 661-762 (814)
224 4g26_A Pentatricopeptide repea 93.2 0.69 2.4E-05 38.3 9.9 83 17-100 107-203 (501)
225 2uy1_A Cleavage stimulation fa 92.4 1.4 4.7E-05 36.2 10.7 91 17-110 215-358 (493)
226 4g26_A Pentatricopeptide repea 90.2 3 0.0001 34.5 10.6 79 22-101 35-134 (501)
227 1nzn_A CGI-135 protein, fissio 89.8 0.4 1.4E-05 33.8 4.3 27 23-49 84-111 (126)
228 2uy1_A Cleavage stimulation fa 89.6 1.4 4.6E-05 36.3 8.0 53 56-110 198-250 (493)
229 3mkr_B Coatomer subunit alpha; 89.4 3.9 0.00013 33.0 10.4 83 22-104 111-230 (320)
230 2ff4_A Probable regulatory pro 89.0 2.1 7.1E-05 34.2 8.5 92 4-98 108-231 (388)
231 1ya0_A SMG-7 transcript varian 88.5 1.9 6.5E-05 36.4 8.2 60 53-113 168-227 (497)
232 3ffl_A Anaphase-promoting comp 88.3 0.99 3.4E-05 33.4 5.7 49 53-102 36-93 (167)
233 3mv2_A Coatomer subunit alpha; 85.4 7.3 0.00025 31.5 9.8 97 22-118 123-255 (325)
234 4a5x_A MITD1, MIT domain-conta 85.2 2 6.7E-05 28.1 5.3 26 90-116 41-66 (86)
235 4gns_B Protein CSD3, chitin bi 83.8 3.5 0.00012 36.7 7.8 48 53-105 353-400 (754)
236 2crb_A Nuclear receptor bindin 83.3 1.2 4.3E-05 30.2 3.7 26 74-99 17-42 (97)
237 3mkq_A Coatomer beta'-subunit; 83.2 7.4 0.00025 32.1 9.1 40 59-98 667-707 (814)
238 3o48_A Mitochondria fission 1 81.6 1.4 4.7E-05 31.5 3.6 44 31-75 61-115 (134)
239 2cpt_A SKD1 protein, vacuolar 80.6 8.2 0.00028 26.5 7.2 13 29-41 15-28 (117)
240 4b4t_S RPN3, 26S proteasome re 79.3 2 6.7E-05 36.9 4.4 55 22-78 240-311 (523)
241 1zbp_A Hypothetical protein VP 79.2 18 0.00063 28.4 9.7 83 22-105 40-133 (273)
242 1y8m_A FIS1; mitochondria, unk 78.9 2.4 8.1E-05 30.6 4.1 21 53-74 93-113 (144)
243 4fhn_B Nucleoporin NUP120; pro 76.0 1.6 5.3E-05 39.7 3.0 75 19-93 846-959 (1139)
244 3mv2_A Coatomer subunit alpha; 75.7 2.8 9.7E-05 33.9 4.2 81 22-103 37-145 (325)
245 3kae_A CDC27, possible protein 73.3 16 0.00056 27.9 7.6 96 17-115 34-157 (242)
246 3mkq_B Coatomer subunit alpha; 66.3 25 0.00085 25.8 7.2 17 81-97 98-114 (177)
247 4h7y_A Dual specificity protei 66.1 25 0.00085 25.8 7.0 99 18-121 17-139 (161)
248 3bqo_A Telomeric repeat-bindin 65.2 3.7 0.00013 31.5 2.5 35 80-114 125-159 (211)
249 3ubw_A 14-3-3E, 14-3-3 protein 64.2 47 0.0016 25.9 8.8 79 22-101 40-130 (261)
250 2ff4_A Probable regulatory pro 63.9 18 0.0006 28.8 6.4 40 75-114 174-213 (388)
251 4gns_B Protein CSD3, chitin bi 63.9 20 0.00068 31.8 7.3 41 22-62 346-396 (754)
252 2v6y_A AAA family ATPase, P60 63.3 26 0.00089 22.3 6.6 14 30-43 9-23 (83)
253 3bu8_A Telomeric repeat-bindin 61.1 5.6 0.00019 30.9 2.9 61 53-114 88-156 (235)
254 2w2u_A Hypothetical P60 katani 59.1 32 0.0011 22.0 6.4 25 90-115 44-68 (83)
255 3ax2_A Mitochondrial import re 57.7 27 0.00093 22.2 5.3 39 76-115 21-59 (73)
256 1wfd_A Hypothetical protein 15 56.7 37 0.0013 22.0 7.5 38 28-66 11-51 (93)
257 3txn_A 26S proteasome regulato 55.4 61 0.0021 26.3 8.4 80 22-101 28-128 (394)
258 3k1s_A PTS system, cellobiose- 55.3 24 0.00081 24.1 5.0 43 5-50 9-57 (109)
259 2v6x_A Vacuolar protein sortin 54.0 38 0.0013 21.2 7.6 13 29-41 10-23 (85)
260 3mkr_B Coatomer subunit alpha; 53.3 12 0.00041 30.2 3.7 82 22-103 25-133 (320)
261 2o8p_A 14-3-3 domain containin 49.9 83 0.0029 24.0 8.8 79 22-101 15-107 (227)
262 1wy6_A Hypothetical protein ST 49.1 26 0.00088 25.8 4.6 33 68-100 121-153 (172)
263 2v6y_A AAA family ATPase, P60 48.8 22 0.00075 22.6 3.8 52 54-115 9-60 (83)
264 1zbp_A Hypothetical protein VP 47.9 61 0.0021 25.4 7.0 47 23-70 7-63 (273)
265 1o9d_A 14-3-3-like protein C; 47.9 95 0.0032 24.0 8.7 78 22-100 17-108 (260)
266 2w2u_A Hypothetical P60 katani 45.0 25 0.00087 22.5 3.7 38 29-67 16-56 (83)
267 2rpa_A Katanin P60 ATPase-cont 44.9 17 0.00059 23.4 2.8 27 75-101 15-41 (78)
268 3bu8_A Telomeric repeat-bindin 44.5 38 0.0013 26.3 5.1 26 22-47 123-149 (235)
269 1wcr_A PTS system, N, N'-diace 43.8 35 0.0012 22.9 4.4 40 8-50 8-53 (103)
270 3efz_A 14-3-3 protein; 14-3-3, 43.8 53 0.0018 25.8 6.0 48 53-101 168-226 (268)
271 3spa_A Mtrpol, DNA-directed RN 43.5 1.5E+02 0.005 27.9 9.6 80 22-102 136-231 (1134)
272 4gq2_M Nucleoporin NUP120; bet 42.6 16 0.00055 32.7 3.2 36 63-99 832-867 (950)
273 2e2a_A Protein (enzyme IIA); h 42.4 35 0.0012 23.0 4.2 39 9-50 11-55 (105)
274 3kez_A Putative sugar binding 42.1 12 0.00042 30.3 2.2 33 69-101 193-225 (461)
275 4a1g_A Mitotic checkpoint seri 42.1 39 0.0013 24.2 4.6 75 32-107 47-135 (152)
276 3lew_A SUSD-like carbohydrate 41.8 34 0.0011 28.1 4.8 32 72-103 203-234 (495)
277 1ya0_A SMG-7 transcript varian 41.3 63 0.0022 27.0 6.5 63 22-85 161-233 (497)
278 4h7y_A Dual specificity protei 41.2 82 0.0028 23.0 6.3 64 22-87 69-142 (161)
279 1om2_A Protein (mitochondrial 38.5 62 0.0021 21.5 4.9 38 77-115 25-62 (95)
280 3myv_A SUSD superfamily protei 37.4 91 0.0031 25.0 6.7 49 53-101 164-219 (454)
281 3mkq_B Coatomer subunit alpha; 37.4 37 0.0013 24.8 3.9 59 18-90 10-78 (177)
282 4b4t_R RPN7, 26S proteasome re 36.2 94 0.0032 24.8 6.6 82 22-103 140-239 (429)
283 4aez_C MAD3, mitotic spindle c 35.6 76 0.0026 24.1 5.6 73 33-106 97-183 (223)
284 2wb7_A PT26-6P; extra chromoso 35.0 32 0.0011 29.6 3.6 62 26-89 423-491 (526)
285 3l8r_A PTCA, putative PTS syst 34.7 57 0.002 22.6 4.4 41 7-50 26-72 (120)
286 2br9_A 14-3-3E, 14-3-3 protein 34.6 65 0.0022 24.5 5.1 45 22-67 14-64 (234)
287 3mcx_A SUSD superfamily protei 34.4 51 0.0018 26.6 4.8 50 53-102 176-232 (477)
288 1no1_A G39P, replisome organiz 34.3 35 0.0012 23.9 3.2 84 13-120 28-118 (126)
289 2cfu_A SDSA1; SDS-hydrolase, l 34.2 1.6E+02 0.0055 25.1 8.1 47 72-119 449-495 (658)
290 3iqu_A 14-3-3 protein sigma; s 32.7 99 0.0034 23.6 5.9 45 22-66 17-66 (236)
291 3iko_C Nucleoporin NUP84; NPC, 32.3 40 0.0014 28.0 3.9 26 73-98 178-203 (460)
292 4gq2_M Nucleoporin NUP120; bet 32.3 84 0.0029 28.1 6.1 89 25-114 822-940 (950)
293 3uzd_A 14-3-3 protein gamma; s 31.8 93 0.0032 24.0 5.6 45 22-66 13-62 (248)
294 3hdx_A SUSD homolog, SUSD supe 31.8 51 0.0018 26.7 4.3 30 72-101 197-226 (478)
295 2zan_A Vacuolar protein sortin 30.8 10 0.00036 30.7 0.0 38 28-66 7-47 (444)
296 3t5v_B Nuclear mRNA export pro 30.5 1.1E+02 0.0037 25.4 6.1 47 22-68 185-252 (455)
297 1wfd_A Hypothetical protein 15 30.4 1.1E+02 0.0037 19.6 6.8 55 53-117 12-66 (93)
298 2npm_A 14-3-3 domain containin 29.9 1.9E+02 0.0066 22.3 9.2 85 16-101 29-130 (260)
299 2wpv_A GET4, UPF0363 protein Y 28.8 2.1E+02 0.0072 22.4 7.7 79 17-95 31-157 (312)
300 2d2s_A Exocyst complex compone 28.5 1.8E+02 0.0063 21.6 10.0 75 22-98 27-117 (235)
301 3jys_A SUSD superfamily protei 28.0 57 0.002 26.8 4.0 39 70-108 186-234 (499)
302 3bqo_A Telomeric repeat-bindin 27.8 45 0.0015 25.4 3.1 26 22-47 126-152 (211)
303 1ixm_A SPO0B, protein (sporula 27.7 57 0.002 23.6 3.6 21 22-42 41-62 (192)
304 3snx_A SUSD homolog, putative 27.6 56 0.0019 26.6 3.9 33 71-103 190-222 (460)
305 4b4t_R RPN7, 26S proteasome re 27.0 39 0.0013 27.1 2.8 30 74-103 133-162 (429)
306 2hz8_A De novo designed DIIRON 26.7 57 0.002 22.5 3.2 60 54-116 12-71 (115)
307 3qnk_A Putative lipoprotein; a 25.9 67 0.0023 26.3 4.1 32 70-101 180-211 (517)
308 4b4t_P 26S proteasome regulato 24.5 2.7E+02 0.0093 22.3 9.2 94 22-115 146-263 (445)
309 4fhn_B Nucleoporin NUP120; pro 24.3 50 0.0017 29.9 3.2 33 65-98 836-868 (1139)
310 2qeb_A D7R4 protein; all-helic 24.3 1.6E+02 0.0056 20.3 5.4 68 28-114 67-138 (145)
311 4gq4_A Menin; tumor suppressor 24.1 3.3E+02 0.011 23.1 8.6 110 5-118 235-355 (489)
312 3txn_A 26S proteasome regulato 22.8 3E+02 0.01 22.1 8.7 82 22-103 108-212 (394)
313 2br9_A 14-3-3E, 14-3-3 protein 22.7 1.3E+02 0.0046 22.7 5.0 43 76-118 9-51 (234)
314 3kae_A CDC27, possible protein 20.9 1.6E+02 0.0055 22.5 4.9 34 66-99 56-89 (242)
315 1o9d_A 14-3-3-like protein C; 20.6 1.7E+02 0.0059 22.5 5.3 43 76-118 12-56 (260)
316 2vkj_A TM1634; membrane protei 20.4 2E+02 0.007 19.3 5.7 32 78-110 59-90 (106)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.69 E-value=5.8e-16 Score=106.42 Aligned_cols=94 Identities=11% Similarity=0.084 Sum_probs=87.6
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
++.+ .|.+.|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|...
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRL-DSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHC
Confidence 4445 8899999999999999 999999999999844 99999999999999 899999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|++.+|+..++++|+.+|+++.++..+
T Consensus 95 ~~~~~A~~~~~~al~l~P~~~~a~~~l 121 (126)
T 4gco_A 95 REWSKAQRAYEDALQVDPSNEEAREGV 121 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCCHHHHHHH
Confidence 999999999999999999999998654
No 2
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.67 E-value=8.4e-16 Score=110.34 Aligned_cols=90 Identities=14% Similarity=0.031 Sum_probs=83.9
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
..|+.+ .+.+.|++++|.+.++ +++.+|+++.+|..+ |++|+.+|++|.++ +|+++.+.+.||.+|.
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l-~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL-GKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-SSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh-CCCCcHHHHHHHHHHH
Confidence 345566 8889999999999999 999999999999844 99999999999999 7999999999999999
Q ss_pred hcccHHHHHHHHHHHHHhCCCCH
Q psy16144 84 RMKRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 84 k~kr~~~AI~vc~kVL~~~P~yp 106 (122)
+.|++.+|+..++++++..|+.|
T Consensus 116 ~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 116 RLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999876
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.65 E-value=1.1e-15 Score=107.19 Aligned_cols=87 Identities=17% Similarity=0.181 Sum_probs=82.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|+|++|.+.++ +++.+|+++.+|..+ +++|..+|++|+++ +|+++.+.+.||..|.+.|++.+|
T Consensus 40 ~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~~~~~~a 118 (150)
T 4ga2_A 40 LYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVEL-NPTQKDLVLKIAELLCKNDVTDGR 118 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHCSSSSH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCChHHH
Confidence 9999999999999999 999999999999855 99999999999999 799999999999999999999998
Q ss_pred HHH-HHHHHHhCCCCHHHH
Q psy16144 92 IDV-SQTIMKAHPSYPKVH 109 (122)
Q Consensus 92 I~v-c~kVL~~~P~ypkir 109 (122)
+.. ++++++.+|++|.+.
T Consensus 119 a~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 119 AKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHhCcCCHHHH
Confidence 876 489999999999874
No 4
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.64 E-value=2.6e-15 Score=105.46 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=91.4
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
..++.+ .+.+.|++++|.+.++ +++.+|.++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l-~p~~~~~~~~lg~~~~ 100 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM-DIXEPRFPFHAAECLL 100 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-CCCCchHHHHHHHHHH
Confidence 345555 8889999999999999 999999999999844 99999999999999 7999999999999999
Q ss_pred hcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Q psy16144 84 RMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMVHL 120 (122)
Q Consensus 84 k~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~~l 120 (122)
..|++.+|+..++++++.+|++|... ++.++|...|
T Consensus 101 ~~g~~~~A~~~~~~al~~~p~~~~~~-~~~~~~~~~l 136 (148)
T 2vgx_A 101 QXGELAEAESGLFLAQELIANXPEFX-ELSTRVSSML 136 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTCGGGH-HHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCcCCCcch-HHHHHHHHHH
Confidence 99999999999999999999988874 4666665543
No 5
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.64 E-value=3.7e-15 Score=102.42 Aligned_cols=101 Identities=9% Similarity=0.019 Sum_probs=90.1
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.++.+ .+.+.|++++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|..
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALM-DINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-CCCCcHHHHHHHHHHHH
Confidence 34445 7889999999999999 999999999999844 99999999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMVH 119 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~~ 119 (122)
.|++.+|+..++++++.+|++|... ++..++...
T Consensus 99 ~g~~~~A~~~~~~al~~~p~~~~~~-~~~~~~~~~ 132 (142)
T 2xcb_A 99 LGDLDGAESGFYSARALAAAQPAHE-ALAARAGAM 132 (142)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCGGGH-HHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcchH-HHHHHHHHH
Confidence 9999999999999999999998874 456666544
No 6
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.60 E-value=4.5e-15 Score=101.08 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=77.8
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.++.+ .+.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|++|+++ +|+++.+.+.||.+|..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARML-DPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 34445 7889999999999999 999999999999855 99999999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCCHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~ypki 108 (122)
.|++.+|++.++++++.+|+++++
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~~~ 121 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYEQL 121 (121)
T ss_dssp HHHHHHHHHHHHHHHC--------
T ss_pred cCCHHHHHHHHHHHHHhCcCCCCC
Confidence 999999999999999999998764
No 7
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.60 E-value=2.4e-14 Score=95.33 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=90.2
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.|..+ .+.+.|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|..
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~ 84 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEK-DPNFVRAYIRKATAQIA 84 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHH
Confidence 34445 7889999999999999 999999999998844 99999999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHhcc
Q psy16144 85 MKRYAEAIDVSQTIMKAH------PSYPKVHKQIFEKAMVHL 120 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~------P~ypkir~~il~ka~~~l 120 (122)
.|++.+|++.++++++.+ |+++.++. .+..+...|
T Consensus 85 ~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~-~l~~~~~~l 125 (126)
T 3upv_A 85 VKEYASALETLDAARTKDAEVNNGSSAREIDQ-LYYKASQQR 125 (126)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHH-HHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhCcccCCchhHHHHHH-HHHHHHHhh
Confidence 999999999999999999 99888876 444554443
No 8
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.57 E-value=2.5e-14 Score=104.39 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=87.1
Q ss_pred HHHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhh----------------C---------HHHHHHHHHHHHHh
Q psy16144 15 IAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNL----------------F---------PDDAVVQYTQACRI 66 (122)
Q Consensus 15 ~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~----------------l---------y~dAa~~ye~Aw~l 66 (122)
+..+... .+++.|++++|.+.++ +++.+|+++.+|.. + |++|...|++|+++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3344444 7788999999999999 99999999988877 5 99999999999999
Q ss_pred hCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 67 IGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 67 ~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|+++.+.+.||.+|...|++.+|+..|+++++.+|+++.++..
T Consensus 84 -~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~ 127 (208)
T 3urz_A 84 -APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIF 127 (208)
T ss_dssp -CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 79999999999999999999999999999999999999987653
No 9
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.55 E-value=1.2e-13 Score=87.92 Aligned_cols=97 Identities=11% Similarity=0.001 Sum_probs=87.9
Q ss_pred HHHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q psy16144 15 IAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLL 82 (122)
Q Consensus 15 ~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~y 82 (122)
...|+.+ .+.+.|++++|.+.++ +++.+|+++.++..+ |++|...|+++++. .|+++.+.+.+|..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL-KPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh-CcccHHHHHHHHHHH
Confidence 3445555 8889999999999999 999999999888744 99999999999999 799999999999999
Q ss_pred HhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 83 LRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 83 lk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.+.|++.+|++.++++++.+|+++.++..+
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 999999999999999999999999987644
No 10
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.55 E-value=7.7e-14 Score=97.19 Aligned_cols=92 Identities=8% Similarity=-0.072 Sum_probs=85.0
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
..|+.+ +|.+.|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVV-DPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHH
Confidence 345555 8889999999999999 999999999988844 99999999999999 7999999999999999
Q ss_pred hcccHHHHHHHHHHHHHhCCCCHHH
Q psy16144 84 RMKRYAEAIDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 84 k~kr~~~AI~vc~kVL~~~P~ypki 108 (122)
+.|++.+|+..++++++.+|+++..
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHH
Confidence 9999999999999999999999883
No 11
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.51 E-value=1.7e-13 Score=95.23 Aligned_cols=101 Identities=9% Similarity=0.089 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHH--HhcCCCChHHHHHHHH-HHhh------------------CcchHHHHhhC---------HHHHHHH
Q psy16144 10 QIIQTIAEWHFL--LYLLPWRWEPLSAGLR-KKQY------------------ISSATNIYNLF---------PDDAVVQ 59 (122)
Q Consensus 10 ~~~~~~~~~~~L--Lyi~~gk~d~A~elL~-~l~~------------------nps~~kA~e~l---------y~dAa~~ 59 (122)
+.++....+... .+.+.|+|++|.+.++ +++. +|....+|..+ |++|...
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 344555666666 8889999999999999 9999 77777777633 9999999
Q ss_pred HHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCH-HHHHH
Q psy16144 60 YTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYP-KVHKQ 111 (122)
Q Consensus 60 ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~yp-kir~~ 111 (122)
+++|+++ +|+++.+.+.+|.+|...|++.+|+..++++++.+|+++ .++..
T Consensus 86 ~~~al~~-~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 137 (162)
T 3rkv_A 86 SSEVLKR-EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVARE 137 (162)
T ss_dssp HHHHHHH-STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHhc-CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999 799999999999999999999999999999999999999 55543
No 12
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.51 E-value=2e-13 Score=95.51 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+++|...+++|.++ .|+++.+.+.||..|.+.|++.+|++.|+++++.+|+++.+...
T Consensus 89 ~~~a~~~~~~a~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~ 146 (184)
T 3vtx_A 89 KQAAIDALQRAIAL-NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQS 146 (184)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHH
Confidence 77888888888888 68888888888888888888888888888888888888877643
No 13
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.50 E-value=4.3e-13 Score=87.48 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=87.6
Q ss_pred HHHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q psy16144 15 IAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLL 82 (122)
Q Consensus 15 ~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~y 82 (122)
...|..+ .+.+.|++++|.+.++ +++.+|.+..++..+ +++|...|+++++. +|+++.+.+.||..|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL-EPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-CCCchHHHHHHHHHH
Confidence 3455556 8889999999999999 999999998888743 99999999999999 799999999999999
Q ss_pred HhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 83 LRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 83 lk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.+.|++.+|+..++++++.+|+++.++..+
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 999999999999999999999998887543
No 14
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=8.7e-13 Score=87.74 Aligned_cols=95 Identities=11% Similarity=0.005 Sum_probs=85.8
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcch---HHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSA---TNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASL 81 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~---~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ 81 (122)
.|+.+ .+.+.|++++|.++++ +++.+|++ ..+|..+ |++|...|+++.++ +|+++.+.+.+|..
T Consensus 30 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~a~~ 108 (148)
T 2dba_A 30 QLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK-DGGDVKALYRRSQA 108 (148)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh-CccCHHHHHHHHHH
Confidence 34455 8889999999999999 99999997 6666633 99999999999999 79999999999999
Q ss_pred HHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 82 LLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 82 ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|...|++.+|+..++++++.+|+++.++..+
T Consensus 109 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 139 (148)
T 2dba_A 109 LEKLGRLDQAVLDLQRCVSLEPKNKVFQEAL 139 (148)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 9999999999999999999999999998644
No 15
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.49 E-value=3.1e-13 Score=99.14 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=85.9
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
++.+ ++.+.|++++|...++ +++.+|+++.+|..+ +++|...|++|.++ +|+++.+.+.||..|.+.
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~-~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVAR-TPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHh
Confidence 3444 8889999999999999 999999999999844 99999999999999 799999999999999999
Q ss_pred -----------ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 -----------KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 -----------kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++.+|+..++++++.+|+++.++.
T Consensus 87 ~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~ 122 (217)
T 2pl2_A 87 YRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHL 122 (217)
T ss_dssp HHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 9999999999999999999998865
No 16
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.49 E-value=6.1e-13 Score=87.61 Aligned_cols=88 Identities=13% Similarity=-0.023 Sum_probs=81.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchH---HHHhhC---------HHHHHHHHHHHHHhhCCCC---hHHHHHHHHHHHhc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSAT---NIYNLF---------PDDAVVQYTQACRIIGTSD---LALHQKLASLLLRM 85 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~---kA~e~l---------y~dAa~~ye~Aw~l~~~~~---~~vgykLA~~ylk~ 85 (122)
.+.+.|++++|.+.++ +++.+|+++ .++..+ |++|...|+++.+. .|++ +.+.+.||.+|.+.
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-~p~~~~~~~~~~~la~~~~~~ 89 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-YPTHDKAAGGLLKLGLSQYGE 89 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTSTTHHHHHHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-CCCCcccHHHHHHHHHHHHHc
Confidence 7788999999999999 999999988 566633 99999999999999 7999 88899999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++.+|+..++++++.+|+++.+..
T Consensus 90 g~~~~A~~~~~~~~~~~p~~~~~~~ 114 (129)
T 2xev_A 90 GKNTEAQQTLQQVATQYPGSDAARV 114 (129)
T ss_dssp TCHHHHHHHHHHHHHHSTTSHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCChHHHH
Confidence 9999999999999999999987754
No 17
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.48 E-value=1.5e-12 Score=83.85 Aligned_cols=95 Identities=9% Similarity=0.008 Sum_probs=86.3
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.+..+ .+...|++++|.+.++ +++.+|+++.++..+ |++|...|+++.+. .|+++.+.+.+|.+|.+
T Consensus 14 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 14 RLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI-DPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc-CccCHHHHHHHHHHHHH
Confidence 34444 8889999999999999 999999988888744 99999999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.|++.+|+..++++++.+|+++.++..+
T Consensus 93 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 93 LNKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 9999999999999999999999887643
No 18
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.48 E-value=1.1e-13 Score=92.26 Aligned_cols=85 Identities=11% Similarity=0.031 Sum_probs=75.4
Q ss_pred CCCChHHHHHHHH-HHhh---CcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 25 LPWRWEPLSAGLR-KKQY---ISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 25 ~~gk~d~A~elL~-~l~~---nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
..|++++|++.++ +++. +|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+.|++.+|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-FPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCchHHHHHHHHHHHHcCCHHHH
Confidence 4699999999999 9999 59888888844 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~ 110 (122)
++.++++++.+|++|.++.
T Consensus 81 ~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHH
Confidence 9999999999999998853
No 19
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.48 E-value=5.1e-13 Score=91.27 Aligned_cols=94 Identities=12% Similarity=0.081 Sum_probs=82.0
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCCh-------HHHHH
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDL-------ALHQK 77 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~-------~vgyk 77 (122)
.+..| .+.+.|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++ .+.++
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEV-GRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHh-CcccchhhHHHHHHHHH
Confidence 45556 8888999999999999 999999999998833 99999999999999 47664 47889
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 78 LASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 78 LA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
||..|.+.|++.+|++.|+++|+.+|+ |.+.+.+
T Consensus 89 lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l 122 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKV 122 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHH
Confidence 999999999999999999999999994 7766544
No 20
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.47 E-value=7.7e-13 Score=87.94 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=86.1
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|..+ .+...|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|.++ +|+++.+.+.||.+|.+.
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-DGQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CchhHHHHHHHHHHHHHH
Confidence 4444 8889999999999999 999999999988744 99999999999999 799999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCC-----CHHHHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPS-----YPKVHKQIF 113 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~-----ypkir~~il 113 (122)
|++.+|+..++++++.+|+ .+.+...+.
T Consensus 91 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~ 123 (137)
T 3q49_B 91 ESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR 123 (137)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHH
Confidence 9999999999999999998 777765443
No 21
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.47 E-value=2.3e-12 Score=87.20 Aligned_cols=98 Identities=13% Similarity=0.071 Sum_probs=89.1
Q ss_pred HHHHHHHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHH
Q psy16144 11 IIQTIAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKL 78 (122)
Q Consensus 11 ~~~~~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykL 78 (122)
.......|+.+ .+.+.|++++|.+.++ +++.+|.++.+|..+ |++|...|+++.+. +|+++.+.+.+
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL-DKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CcccHHHHHHH
Confidence 34555566666 8889999999999999 999999998888744 99999999999999 79999999999
Q ss_pred HHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 79 ASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 79 A~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
|..|...|++.+|+..++++++.+|+++.++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999876
No 22
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.45 E-value=3.5e-12 Score=81.50 Aligned_cols=94 Identities=15% Similarity=0.259 Sum_probs=85.7
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|+.+ ++.+.|++++|.++++ +++.+|++..++..+ +++|...|+++.+. +|+++.+.+.||..|...
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-DPNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-CCccHHHHHHHHHHHHHh
Confidence 4444 7889999999999999 999999988887743 99999999999999 699999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|++.+|+..++++++.+|+++.++..+
T Consensus 91 ~~~~~A~~~~~~~~~~~~~~~~~~~~l 117 (125)
T 1na0_A 91 GDYDEAIEYYQKALELDPNNAEAKQNL 117 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 999999999999999999999987643
No 23
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.44 E-value=2.9e-12 Score=91.64 Aligned_cols=103 Identities=8% Similarity=0.021 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHH--HhcCCCChHHHHHHHH-HHhhCcchH----------------HHHhhC---------HHHHHHHH
Q psy16144 9 MQIIQTIAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSAT----------------NIYNLF---------PDDAVVQY 60 (122)
Q Consensus 9 ~~~~~~~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~----------------kA~e~l---------y~dAa~~y 60 (122)
-+.++....+..+ .+.+.|+|++|.++++ +++.+|+++ .+|..+ |++|...|
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 111 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3445555566666 8889999999999999 999998876 555522 99999999
Q ss_pred HHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 61 TQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 61 e~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
++|+++ +|+++.+.+.+|.+|...|++.+|++.++++++.+|+++.++..+
T Consensus 112 ~~al~~-~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 162 (198)
T 2fbn_A 112 SKVLKI-DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSY 162 (198)
T ss_dssp HHHHHH-STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHh-CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHH
Confidence 999999 799999999999999999999999999999999999999987643
No 24
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.44 E-value=2.1e-13 Score=95.48 Aligned_cols=90 Identities=13% Similarity=0.020 Sum_probs=82.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
++-+.|++|.|.+.++ ++..+|+.+.++..+ |++|..+|++|+++ +|+++.+.+.||.+|.+.|++.+|
T Consensus 6 ~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~-~p~~~~a~~~lg~~~~~~~~~~~A 84 (150)
T 4ga2_A 6 MRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV-QERDPKAHRFLGLLYELEENTDKA 84 (150)
T ss_dssp -CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCchHHH
Confidence 6778899999999999 999999988877633 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~i 112 (122)
+..++++++.+|++|.+...+
T Consensus 85 ~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 85 VECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHH
Confidence 999999999999999987543
No 25
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.43 E-value=6e-13 Score=93.02 Aligned_cols=86 Identities=12% Similarity=0.054 Sum_probs=78.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
++...++++.|.+.++ +++.+|++..++..+ |++|...|++++++ +|+++.+.+.||.+|.+.|++.+|
T Consensus 82 ~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~-~p~~~~~~~~lg~~~~~~g~~~~A 160 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI-KPGFIRAYQSIGLAYEGKGLRDEA 160 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh-cchhhhHHHHHHHHHHHCCCHHHH
Confidence 7778889999999999 999999988887744 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHH
Q psy16144 92 IDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 92 I~vc~kVL~~~P~ypki 108 (122)
+..++++|+.+|++++.
T Consensus 161 ~~~~~~al~~~p~~a~~ 177 (184)
T 3vtx_A 161 VKYFKKALEKEEKKAKY 177 (184)
T ss_dssp HHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHhCCccCHHH
Confidence 99999999999987653
No 26
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.43 E-value=7.8e-13 Score=96.95 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=84.8
Q ss_pred HHHH--HhcCC-----------CChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHH
Q psy16144 18 WHFL--LYLLP-----------WRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLAL 74 (122)
Q Consensus 18 ~~~L--Lyi~~-----------gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~v 74 (122)
|..+ +|.+. |++++|.+.++ +++.+|+++.+|..+ +++|...|++|+++ + +++.+
T Consensus 76 ~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-~~~~~ 153 (217)
T 2pl2_A 76 YMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALAL-E-DTPEI 153 (217)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-CCHHH
T ss_pred HHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhc-c-cchHH
Confidence 4444 77788 99999999999 999999999998844 99999999999999 5 89999
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 75 HQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 75 gykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.+.||..|...|++.+|+..|+++++.+|+++.++...
T Consensus 154 ~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~l 191 (217)
T 2pl2_A 154 RSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRY 191 (217)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 99999999999999999999999999999999987543
No 27
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.42 E-value=3e-12 Score=82.68 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=83.5
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCC-------hHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSD-------LALHQ 76 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~-------~~vgy 76 (122)
..|+.+ ++.+.|++++|.++++ +++.+|+++.++..+ |++|...|+++++. .|++ +.+.+
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV-GRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-HHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-ccccchhHHHHHHHHH
Confidence 345555 8889999999999999 999999998888744 99999999999999 4777 89999
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 77 KLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 77 kLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
.||..|.+.|++.+|++.++++++.+| .|.++..
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~ 117 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKK 117 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHH
Confidence 999999999999999999999999999 5777653
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.41 E-value=1.5e-12 Score=114.13 Aligned_cols=89 Identities=19% Similarity=0.215 Sum_probs=53.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|+++.+|..+ +++|..+|++|+++ +|+++.+.++||..|.+.|++++|
T Consensus 52 ~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l-~P~~~~a~~~Lg~~~~~~g~~~eA 130 (723)
T 4gyw_A 52 VLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-NPAFADAHSNLASIHKDSGNIPEA 130 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHH
Confidence 5555566666666666 666666655555522 66666666666666 566666666666666666666666
Q ss_pred HHHHHHHHHhCCCCHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~ 111 (122)
++.|+++|+++|+++.++..
T Consensus 131 i~~~~~Al~l~P~~~~a~~~ 150 (723)
T 4gyw_A 131 IASYRTALKLKPDFPDAYCN 150 (723)
T ss_dssp HHHHHHHHHHCSCCHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHhh
Confidence 66666666666666655443
No 29
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.39 E-value=1.5e-12 Score=82.33 Aligned_cols=84 Identities=12% Similarity=-0.010 Sum_probs=79.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHhc-ccH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTS--DLALHQKLASLLLRM-KRY 88 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~--~~~vgykLA~~ylk~-kr~ 88 (122)
++.+.|++++|.+.++ +++.+|.+..+|..+ |++|...|+++.+. +|+ ++.+.+.||.+|.+. |++
T Consensus 15 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 93 (112)
T 2kck_A 15 LQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINV-IEDEYNKDVWAAKADALRYIEGKE 93 (112)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-SCCTTCHHHHHHHHHHHTTCSSCS
T ss_pred HHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CcccchHHHHHHHHHHHHHHhCCH
Confidence 7889999999999999 999999998888743 99999999999999 699 999999999999999 999
Q ss_pred HHHHHHHHHHHHhCCCCH
Q psy16144 89 AEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 89 ~~AI~vc~kVL~~~P~yp 106 (122)
.+|++.++++++.+|+.|
T Consensus 94 ~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 94 VEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHHHhhcccCCC
Confidence 999999999999999865
No 30
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.39 E-value=2.3e-12 Score=112.84 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=87.4
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
++.| +|.++|++++|++.++ +++.+|++..+|..+ +++|..+|++|+++ +|+++.+.++||..|...
T Consensus 12 l~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l-~P~~~~a~~nLg~~l~~~ 90 (723)
T 4gyw_A 12 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI-SPTFADAYSNMGNTLKEM 90 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHc
Confidence 5556 9999999999999999 999999999999844 99999999999999 899999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++++|++.|+++++++|+++.+...
T Consensus 91 g~~~~A~~~~~kAl~l~P~~~~a~~~ 116 (723)
T 4gyw_A 91 QDVQGALQCYTRAIQINPAFADAHSN 116 (723)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999999999988754
No 31
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.38 E-value=6.8e-12 Score=90.57 Aligned_cols=87 Identities=11% Similarity=-0.051 Sum_probs=80.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCc-chHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYIS-SATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~np-s~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~ 90 (122)
.|.+.|+|++|.+.++ +++.+| .+..++..+ |++|...|++|.++ +|+++.+.+.||.+|.+.|++.+
T Consensus 16 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~~~~~~ 94 (228)
T 4i17_A 16 DALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK-NYNLANAYIGKSAAYRDMKNNQE 94 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-TCSHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHHcccHHH
Confidence 8889999999999999 999998 767666633 99999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHH
Q psy16144 91 AIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypkir 109 (122)
|+..++++++.+|+++.+.
T Consensus 95 A~~~~~~al~~~p~~~~~~ 113 (228)
T 4i17_A 95 YIATLTEGIKAVPGNATIE 113 (228)
T ss_dssp HHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHCCCcHHHH
Confidence 9999999999999999654
No 32
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.36 E-value=4.2e-12 Score=91.67 Aligned_cols=88 Identities=6% Similarity=-0.084 Sum_probs=82.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCCh-------HHHHHHHHHHHh
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDL-------ALHQKLASLLLR 84 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~-------~vgykLA~~ylk 84 (122)
+|.+.|++++|.+.++ +++.+|+++.+|..+ |++|...|++++++ .|+++ .+.+.+|..|.+
T Consensus 51 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~g~~~~~ 129 (228)
T 4i17_A 51 CADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKA-VPGNATIEKLYAIYYLKEGQKFQQ 129 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHHHhHHHHH
Confidence 8899999999999999 999999999998844 99999999999999 79999 779999999999
Q ss_pred cccHHHHHHHHHHHHHhCCC--CHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPS--YPKVHK 110 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~--ypkir~ 110 (122)
.|++.+|++.|+++++.+|+ ++.+..
T Consensus 130 ~~~~~~A~~~~~~al~~~p~~~~~~~~~ 157 (228)
T 4i17_A 130 AGNIEKAEENYKHATDVTSKKWKTDALY 157 (228)
T ss_dssp TTCHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCCCcccHHHHH
Confidence 99999999999999999999 777654
No 33
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.35 E-value=1.3e-11 Score=96.98 Aligned_cols=96 Identities=8% Similarity=0.044 Sum_probs=86.1
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcch---------------HHHHhhC---------HHHHHHHHHHHHHhhC
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSA---------------TNIYNLF---------PDDAVVQYTQACRIIG 68 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~---------------~kA~e~l---------y~dAa~~ye~Aw~l~~ 68 (122)
..|+.+ +|.+.|+|++|.+.++ +++.+|++ ..+|..+ |++|...|++|+++ +
T Consensus 148 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~-~ 226 (336)
T 1p5q_A 148 TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL-D 226 (336)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C
Confidence 345555 8889999999999999 99999998 4666633 99999999999999 7
Q ss_pred CCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 69 TSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 69 ~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|+++.+.+.+|.+|...|++.+|+..++++++.+|+++.++..+
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l 270 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQL 270 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999887543
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.8e-11 Score=87.42 Aligned_cols=90 Identities=12% Similarity=0.123 Sum_probs=83.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|...|++++|.+.++ +++.+|+++.+|..+ |++|...|+++++. +|+++.+.+.||..|.+.|++.+|
T Consensus 148 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 148 EYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEK-DPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhhHHHH
Confidence 8889999999999999 999999999888744 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhC------CCCHHHHHHH
Q psy16144 92 IDVSQTIMKAH------PSYPKVHKQI 112 (122)
Q Consensus 92 I~vc~kVL~~~------P~ypkir~~i 112 (122)
+..++++++.+ |+++.++..+
T Consensus 227 ~~~~~~a~~~~~~~~~~p~~~~~~~~l 253 (258)
T 3uq3_A 227 LETLDAARTKDAEVNNGSSAREIDQLY 253 (258)
T ss_dssp HHHHHHHHHHHHHHHTTTTHHHHHHHH
T ss_pred HHHHHHHHHhChhhcCCCchHHHHHHH
Confidence 99999999999 9888887643
No 35
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.33 E-value=4.7e-12 Score=93.80 Aligned_cols=84 Identities=10% Similarity=0.086 Sum_probs=77.1
Q ss_pred CCChHHHHHHHH-HHhhCcchHHHHhhC-------------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 26 PWRWEPLSAGLR-KKQYISSATNIYNLF-------------------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 26 ~gk~d~A~elL~-~l~~nps~~kA~e~l-------------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
.+.|++|.+.++ +++.||+++.+|.-+ +++|+..|++|+++ +|+++.+.|.||.+|...
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-dP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-DPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-CcCcHHHHHHHHHHHHHh
Confidence 467999999999 999999999999833 46999999999999 899999999999999988
Q ss_pred c-----------cHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 K-----------RYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 k-----------r~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
| ++++|+..|+++++++|+++..++
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~ 129 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 129 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5 899999999999999999987765
No 36
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.33 E-value=2.2e-11 Score=88.29 Aligned_cols=89 Identities=13% Similarity=0.009 Sum_probs=83.0
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|..+ +|...|++++|.+.++ +++.+|.++.+|..+ |++|...|++|.++ +|+++.+.+.||.+|.+.
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 46 LYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL-DPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-CccccHHHHHHHHHHHHh
Confidence 4444 8899999999999999 999999999998844 99999999999999 799999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypk 107 (122)
|++.+|+..++++++.+|+++.
T Consensus 125 g~~~~A~~~~~~a~~~~~~~~~ 146 (275)
T 1xnf_A 125 GRDKLAQDDLLAFYQDDPNDPF 146 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHH
T ss_pred ccHHHHHHHHHHHHHhCCCChH
Confidence 9999999999999999999984
No 37
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.32 E-value=1.2e-11 Score=86.34 Aligned_cols=92 Identities=18% Similarity=0.267 Sum_probs=82.8
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC----------H--HHHHHHHHHHHHhhCCCChHHHHHHHHH
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF----------P--DDAVVQYTQACRIIGTSDLALHQKLASL 81 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l----------y--~dAa~~ye~Aw~l~~~~~~~vgykLA~~ 81 (122)
-|..+ +|...|++++|.+.++ +++.+|+++.++..+ + ++|...|+++++. +|+++.+.+.||..
T Consensus 46 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~la~~ 124 (177)
T 2e2e_A 46 QWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALAL-DSNEITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH-CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh-CCCcHHHHHHHHHH
Confidence 34555 8999999999999999 999999988877632 6 9999999999999 79999999999999
Q ss_pred HHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 82 LLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 82 ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
|...|++.+|+..++++++.+|+++...
T Consensus 125 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 125 AFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 9999999999999999999999887543
No 38
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.32 E-value=7.3e-12 Score=101.65 Aligned_cols=87 Identities=7% Similarity=0.032 Sum_probs=45.2
Q ss_pred HhcCCCC-hHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHH
Q psy16144 22 LYLLPWR-WEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk-~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~ 90 (122)
++...|+ +++|.+.++ +++.||.+..+|..+ |++|...|++|+++ +|+|+.+.+.+|.+|.+.|++.+
T Consensus 140 ~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~l-dP~~~~a~~~lg~~~~~~g~~~e 218 (382)
T 2h6f_A 140 LLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ-DAKNYHAWQHRQWVIQEFKLWDN 218 (382)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CccCHHHHHHHHHHHHHcCChHH
Confidence 4444454 555555555 555555555555422 45555555555555 45555555555555555555555
Q ss_pred HHHHHHHHHHhCCCCHHHH
Q psy16144 91 AIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypkir 109 (122)
|++.|+++++.+|+++.++
T Consensus 219 Al~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 219 ELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCCCHHHH
Confidence 5555555555555555444
No 39
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.32 E-value=1.7e-12 Score=96.23 Aligned_cols=99 Identities=13% Similarity=-0.026 Sum_probs=83.5
Q ss_pred HHHHHHHH--HhcCCCChHHHHHHHH-HHhhCcc-------hHH-----HHhhC---------HHHHHHHHHHHHHh---
Q psy16144 14 TIAEWHFL--LYLLPWRWEPLSAGLR-KKQYISS-------ATN-----IYNLF---------PDDAVVQYTQACRI--- 66 (122)
Q Consensus 14 ~~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps-------~~k-----A~e~l---------y~dAa~~ye~Aw~l--- 66 (122)
...+|... .+.+.|+|++|.+.++ +++++|+ ... +|.-+ |++|..+|++|+++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 34444444 7788999999999999 9999999 333 55522 99999999999998
Q ss_pred ---hCCCChHHH----HHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 67 ---IGTSDLALH----QKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 67 ---~~~~~~~vg----ykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.+|+++.+. |++|.+|.+.|++++|+..|+++++++|+..-|.+++
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 149999999 9999999999999999999999999999987765544
No 40
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.32 E-value=3.9e-12 Score=103.25 Aligned_cols=92 Identities=7% Similarity=0.069 Sum_probs=83.9
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC----------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF----------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l----------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
|+.+ ++.+.|++++|.+.++ +++.||++..+|..+ |++|...|++|+++ +|+++.+.+.+|.+|.+
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l-~P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE-QPKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHH
Confidence 4444 8888999999999999 999999999999843 99999999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
.|++.+|+..|+++|+.+|+++.++.
T Consensus 179 ~g~~~eAl~~~~kal~ldP~~~~a~~ 204 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAKNYHAWQ 204 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCccCHHHHH
Confidence 99999999999999999999998864
No 41
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.31 E-value=4.3e-11 Score=76.66 Aligned_cols=89 Identities=13% Similarity=0.181 Sum_probs=72.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
.|.+.|++++|.++++ +++.+|++..++..+ +++|...|+++.+. +|+++.+.+.+|..|...|++.+|
T Consensus 10 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A 88 (136)
T 2fo7_A 10 AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-DPRSAEAWYNLGNAYYKQGDYDEA 88 (136)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHHhcCHHHH
Confidence 6777788888888888 888888877776633 88888888888888 688888888888888888888888
Q ss_pred HHHHHHHHHhCCCCHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~ 111 (122)
+..++++++.+|+.+.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~ 108 (136)
T 2fo7_A 89 IEYYQKALELDPRSAEAWYN 108 (136)
T ss_dssp HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHH
Confidence 88888888888888776543
No 42
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.31 E-value=2.4e-11 Score=93.71 Aligned_cols=89 Identities=17% Similarity=0.138 Sum_probs=63.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchH-----HHHhhC------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSAT-----NIYNLF------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~-----kA~e~l------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~ 89 (122)
+|.+.|++++|.+.++ +++.+|+.. .+|..+ +++|...|+++.+. .|+++.+.+.||..|++.|+++
T Consensus 139 ~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~-~p~~~~~~~~la~~~~~~g~~~ 217 (291)
T 3mkr_A 139 ILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK-CSPTLLLLNGQAACHMAQGRWE 217 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHcCCHH
Confidence 6777777777777777 777777654 233221 77777777777777 5777777777777777777777
Q ss_pred HHHHHHHHHHHhCCCCHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|++.++++|+.+|++|.+...
T Consensus 218 eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 218 AAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHH
Confidence 7777777777777777776543
No 43
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.30 E-value=6e-11 Score=80.28 Aligned_cols=89 Identities=18% Similarity=0.190 Sum_probs=72.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|...|++++|.++++ +++.+|+...++..+ +++|...|+++.+. .|.++.+.+.+|..|.+.|++.+|
T Consensus 51 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A 129 (186)
T 3as5_A 51 AYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA-NPINFNVRFRLGVALDNLGRFDEA 129 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CcHhHHHHHHHHHHHHHcCcHHHH
Confidence 7777888888888888 888888877777633 88888888888888 688888888888888888888888
Q ss_pred HHHHHHHHHhCCCCHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~ 111 (122)
++.++++++.+|+++.+...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~ 149 (186)
T 3as5_A 130 IDSFKIALGLRPNEGKVHRA 149 (186)
T ss_dssp HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHhcCccchHHHHH
Confidence 88888888888888776543
No 44
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.30 E-value=1.5e-12 Score=93.24 Aligned_cols=79 Identities=11% Similarity=0.070 Sum_probs=72.5
Q ss_pred HHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 32 LSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 32 A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
+...++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+.|+|.+|++.|+++++.
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY-DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 445677 899999999998844 99999999999999 8999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q psy16144 102 HPSYPKVHKQ 111 (122)
Q Consensus 102 ~P~ypkir~~ 111 (122)
+|++|.++..
T Consensus 100 ~P~~~~~~~~ 109 (151)
T 3gyz_A 100 GKNDYTPVFH 109 (151)
T ss_dssp SSSCCHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998754
No 45
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.30 E-value=2.3e-11 Score=86.62 Aligned_cols=87 Identities=9% Similarity=0.024 Sum_probs=49.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.++++ +++.+|+++.++..+ +++|...|+++++. .|+++.+.+.||..|.+.|++.+|
T Consensus 134 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~A 212 (243)
T 2q7f_A 134 VLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQ-DPGHADAFYNAGVTYAYKENREKA 212 (243)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCTTHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHccCHHHH
Confidence 4555555555555555 555555555544422 55555555555555 455555555566666666666666
Q ss_pred HHHHHHHHHhCCCCHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir 109 (122)
+..++++++.+|+++.++
T Consensus 213 ~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 213 LEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHccCcchHHHH
Confidence 666666666666555554
No 46
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.28 E-value=3.2e-11 Score=85.52 Aligned_cols=85 Identities=8% Similarity=-0.012 Sum_probs=74.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCCh----------------HHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDL----------------ALH 75 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~----------------~vg 75 (122)
+|.+.|++++|.+.++ +++.+|+++.+|..+ |++|...|+++.++ .|+++ .+.
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~~~~~~~~~~~~~~~ 124 (213)
T 1hh8_A 46 MYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQ-LRGNQLIDYKILGLQFKLFACEVL 124 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-TTTCSEEECGGGTBCCEEEHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHh-CCCccHHHHHHhccccCccchHHH
Confidence 8888999999999999 999999988888743 99999999999998 47666 899
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCCCCHH
Q psy16144 76 QKLASLLLRMKRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 76 ykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypk 107 (122)
+.||.+|.+.|++.+|+..++++++.+|++..
T Consensus 125 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 125 YNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999997644
No 47
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=9.3e-11 Score=83.69 Aligned_cols=89 Identities=15% Similarity=0.097 Sum_probs=80.6
Q ss_pred HhcCCCChHHHHHHHH-HHh--------------------------hCcchHHHHhhC---------HHHHHHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQ--------------------------YISSATNIYNLF---------PDDAVVQYTQACR 65 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~--------------------------~nps~~kA~e~l---------y~dAa~~ye~Aw~ 65 (122)
+|.+.|++++|.+.++ +++ .+|+.+.+|..+ |++|...|+++++
T Consensus 88 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 167 (258)
T 3uq3_A 88 AYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIK 167 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8899999999999999 999 677777766633 9999999999999
Q ss_pred hhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 66 IIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 66 l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
. +|+++.+.+.||..|.+.|++.+|+..++++++.+|+++.+...
T Consensus 168 ~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 212 (258)
T 3uq3_A 168 R-APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 212 (258)
T ss_dssp H-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred c-CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9 79999999999999999999999999999999999999987653
No 48
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.27 E-value=1.8e-11 Score=93.76 Aligned_cols=91 Identities=16% Similarity=0.096 Sum_probs=74.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC-------------------------------------------HHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF-------------------------------------------PDDAV 57 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l-------------------------------------------y~dAa 57 (122)
.+.+.|++++|.+.++ +++.+|+++.++..+ +++|+
T Consensus 126 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~ 205 (287)
T 3qou_A 126 QLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEI 205 (287)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccH
Confidence 6667777777777777 777777777666522 33467
Q ss_pred HHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC--HHHHHHHH
Q psy16144 58 VQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSY--PKVHKQIF 113 (122)
Q Consensus 58 ~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~y--pkir~~il 113 (122)
..|++|++. +|+++.+.+.||..|+..|++++|++.++++++.+|++ +.++....
T Consensus 206 ~~l~~al~~-~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 206 QQLQQQVAE-NPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred HHHHHHHhc-CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 778888898 79999999999999999999999999999999999999 77776543
No 49
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.27 E-value=2e-11 Score=86.11 Aligned_cols=93 Identities=16% Similarity=0.089 Sum_probs=78.8
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC----------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF----------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l----------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
|+.+ +|.+.|++++|.+.++ +++.+| .+..+... ..+|...|++|++. +|+++.+.+.||..|..
T Consensus 43 ~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~-~P~~~~~~~~la~~~~~ 120 (176)
T 2r5s_A 43 KLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAA-NPDNFELACELAVQYNQ 120 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH-STTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 4445 8899999999999999 999998 66554422 23479999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCC--HHHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSY--PKVHKQI 112 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~y--pkir~~i 112 (122)
.|++++|++.++++++.+|++ +.++...
T Consensus 121 ~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l 150 (176)
T 2r5s_A 121 VGRDEEALELLWNILKVNLGAQDGEVKKTF 150 (176)
T ss_dssp TTCHHHHHHHHHHHHTTCTTTTTTHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcccChHHHHHHH
Confidence 999999999999999999987 4466544
No 50
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.26 E-value=7.9e-11 Score=94.62 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=88.2
Q ss_pred HHHHHHHHHHH--HhcCCCChHHHHHHHH-HHh----------------hCcchHHHHhhC---------HHHHHHHHHH
Q psy16144 11 IIQTIAEWHFL--LYLLPWRWEPLSAGLR-KKQ----------------YISSATNIYNLF---------PDDAVVQYTQ 62 (122)
Q Consensus 11 ~~~~~~~~~~L--Lyi~~gk~d~A~elL~-~l~----------------~nps~~kA~e~l---------y~dAa~~ye~ 62 (122)
.++....|..+ .+.+.|+|++|.+.++ +++ .+|....+|..+ |++|...|++
T Consensus 219 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 298 (370)
T 1ihg_A 219 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLE 298 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 34444556666 8889999999999999 998 667666776633 9999999999
Q ss_pred HHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 63 ACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 63 Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|+++ +|+++.+.+.+|.+|...|++.+|++.++++++.+|+++.++..+
T Consensus 299 al~~-~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 299 ALEI-DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHTT-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHh-CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 9999 799999999999999999999999999999999999999987643
No 51
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.26 E-value=1.4e-11 Score=85.90 Aligned_cols=88 Identities=13% Similarity=0.127 Sum_probs=77.1
Q ss_pred hcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHH-HHhcccH--H
Q psy16144 23 YLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASL-LLRMKRY--A 89 (122)
Q Consensus 23 yi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~-ylk~kr~--~ 89 (122)
+...|++++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.+|.+ |...|++ .
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL-RGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-HCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHhcCCcchH
Confidence 456799999999999 999999999998844 99999999999999 69999999999999 8999999 9
Q ss_pred HHHHHHHHHHHhCCCCHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|+..++++++.+|+++.++..
T Consensus 99 ~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 99 QTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHH
Confidence 9999999999999999988654
No 52
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.25 E-value=5.9e-11 Score=91.44 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=53.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|++..+|..+ +++|...|+++.++ +|+++.+.+.||..|.+.|++.+|
T Consensus 178 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~~A 256 (388)
T 1w3b_A 178 VFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSL-SPNHAVVHGNLACVYYEQGLIDLA 256 (388)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CcCCHHHHHHHHHHHHHcCCHHHH
Confidence 5566666666666666 666666665555422 55666666666666 466666666666666666666666
Q ss_pred HHHHHHHHHhCCCCHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir 109 (122)
++.++++++.+|++|.+.
T Consensus 257 ~~~~~~al~~~p~~~~~~ 274 (388)
T 1w3b_A 257 IDTYRRAIELQPHFPDAY 274 (388)
T ss_dssp HHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHhhCCCCHHHH
Confidence 666666666666666554
No 53
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.25 E-value=1.6e-10 Score=85.68 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=84.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHh---------h--C--HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYN---------L--F--PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e---------~--l--y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr 87 (122)
++.+.|++++|.+.++ +++.+|+++..+. + . |++|...|+++.+. +|+++.+.+.+|..|.+.|+
T Consensus 243 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 321 (359)
T 3ieg_A 243 ELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM-EPDNVNALKDRAEAYLIEEM 321 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHcCC
Confidence 6889999999999999 9999999774432 1 1 99999999999999 79999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q psy16144 88 YAEAIDVSQTIMKAHPSYPKVHKQIFEKAMVH 119 (122)
Q Consensus 88 ~~~AI~vc~kVL~~~P~ypkir~~il~ka~~~ 119 (122)
+.+|++.++++++.+|+++.++.. |.++...
T Consensus 322 ~~~A~~~~~~a~~~~p~~~~~~~~-l~~~~~~ 352 (359)
T 3ieg_A 322 YDEAIQDYEAAQEHNENDQQIREG-LEKAQRL 352 (359)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCChHHHHH-HHHHHHH
Confidence 999999999999999999999864 4454443
No 54
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.25 E-value=1.4e-10 Score=82.60 Aligned_cols=87 Identities=18% Similarity=0.103 Sum_probs=50.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|+...++..+ +++|...|+++++. .|+++.+.+.+|..|.+.|++.+|
T Consensus 66 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A 144 (243)
T 2q7f_A 66 LLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA-GMENGDLFYMLGTVLVKLEQPKLA 144 (243)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TCCSHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhccHHHH
Confidence 5555566666666666 556555555554422 55666666666655 455555566666666666666666
Q ss_pred HHHHHHHHHhCCCCHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir 109 (122)
+..++++++.+|+++.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~ 162 (243)
T 2q7f_A 145 LPYLQRAVELNENDTEAR 162 (243)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCCccHHHH
Confidence 666666666666555544
No 55
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.24 E-value=6.5e-11 Score=97.49 Aligned_cols=94 Identities=14% Similarity=0.063 Sum_probs=86.0
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|+.+ +|.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|++|+++ +|+++.+.+.||.+|.+.
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDA-APEHPGIALWLGHALEDA 104 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHc
Confidence 4455 8889999999999999 999999999888744 99999999999999 799999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|++.+|++.++++++.+|+++.+...+
T Consensus 105 g~~~~A~~~~~~al~~~p~~~~~~~~l 131 (568)
T 2vsy_A 105 GQAEAAAAAYTRAHQLLPEEPYITAQL 131 (568)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 999999999999999999999886544
No 56
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.24 E-value=8.5e-11 Score=96.20 Aligned_cols=96 Identities=10% Similarity=0.051 Sum_probs=81.7
Q ss_pred HHHHHHH--HhcCCCChHHHHHHHH-HHhhCcch---------------HHHHhhC---------HHHHHHHHHHHHHhh
Q psy16144 15 IAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSA---------------TNIYNLF---------PDDAVVQYTQACRII 67 (122)
Q Consensus 15 ~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~---------------~kA~e~l---------y~dAa~~ye~Aw~l~ 67 (122)
...|+.+ .|.+.|+|++|...++ +++.+|++ ..+|..+ |++|..+|++|+++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~- 346 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL- 346 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-
Confidence 3445555 8889999999999999 99999998 4555522 99999999999999
Q ss_pred CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 68 GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 68 ~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|+++.+.|++|.+|++.|+|.+|+..|+++++.+|+++.++..
T Consensus 347 ~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~ 390 (457)
T 1kt0_A 347 DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQ 390 (457)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHH
T ss_pred CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 79999999999999999999999999999999999999987654
No 57
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.23 E-value=6.9e-11 Score=86.00 Aligned_cols=84 Identities=17% Similarity=0.182 Sum_probs=75.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh-------
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR------- 84 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk------- 84 (122)
+|.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|++++++ +|+++.+.+.||..|..
T Consensus 63 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~P~~~~a~~~lg~~~~~~~~~~~~ 141 (208)
T 3urz_A 63 AYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQL-EADNLAANIFLGNYYYLTAEQEKK 141 (208)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHhHHHHH
Confidence 8899999999999999 999999999999844 99999999999999 79999999988877643
Q ss_pred ----------------------------cccHHHHHHHHHHHHHhCCCCH
Q psy16144 85 ----------------------------MKRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 85 ----------------------------~kr~~~AI~vc~kVL~~~P~yp 106 (122)
.|+|.+|++.++++++.+|+..
T Consensus 142 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 142 KLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 3468899999999999999753
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.23 E-value=1e-10 Score=79.16 Aligned_cols=90 Identities=10% Similarity=0.059 Sum_probs=83.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
.+.+.|++++|.+.++ +++.+|+++.++..+ +++|...|+++.+. .|+++.+.+.+|..|...|++.+|
T Consensus 17 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A 95 (186)
T 3as5_A 17 SHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLAD-APDNVKVATVLGLTYVQVQKYDLA 95 (186)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcCHHHH
Confidence 7888999999999999 999999988887744 99999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~i 112 (122)
++.++++++.+|+++.+...+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~ 116 (186)
T 3as5_A 96 VPLLIKVAEANPINFNVRFRL 116 (186)
T ss_dssp HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHhcCcHhHHHHHHH
Confidence 999999999999999876543
No 59
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.23 E-value=1.1e-10 Score=86.14 Aligned_cols=92 Identities=12% Similarity=0.012 Sum_probs=81.1
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcch---HHHHhhC---------HHHHHHHHHHHHHhhCCCC---hHHHHHHH
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSA---TNIYNLF---------PDDAVVQYTQACRIIGTSD---LALHQKLA 79 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~---~kA~e~l---------y~dAa~~ye~Aw~l~~~~~---~~vgykLA 79 (122)
++.+ .+.+.|+|++|.+.|+ +++.+|++ +.++..+ |++|...|+++++. .|++ +.+.|.||
T Consensus 18 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-~p~~~~~~~a~~~lg 96 (261)
T 3qky_A 18 AFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQI-YQIDPRVPQAEYERA 96 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH-CCCCchhHHHHHHHH
Confidence 4444 8889999999999999 99999998 7777644 99999999999999 5644 67899999
Q ss_pred HHHHh--------cccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 80 SLLLR--------MKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 80 ~~ylk--------~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
.+|.+ .|++.+|+..++++++.+|+++.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 135 (261)
T 3qky_A 97 MCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDD 135 (261)
T ss_dssp HHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred HHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHH
Confidence 99999 99999999999999999999987753
No 60
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.23 E-value=8e-11 Score=87.38 Aligned_cols=95 Identities=16% Similarity=0.094 Sum_probs=86.7
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.|..+ .+.+.|++++|.+.++ +++.+|+++.+|..+ |++|...|+++++. +|+++.+.+.||..|.+
T Consensus 5 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 83 (359)
T 3ieg_A 5 KHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIAL-KMDFTAARLQRGHLLLK 83 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCcchHHHHHHHHHHH
Confidence 34444 8889999999999999 999999999988844 99999999999999 79999999999999999
Q ss_pred cccHHHHHHHHHHHHHhCC---CCHHHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHP---SYPKVHKQI 112 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P---~ypkir~~i 112 (122)
.|++.+|+..|+++++.+| +++.+...+
T Consensus 84 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 114 (359)
T 3ieg_A 84 QGKLDEAEDDFKKVLKSNPSEQEEKEAESQL 114 (359)
T ss_dssp HTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhcCCcccChHHHHHHH
Confidence 9999999999999999999 888887654
No 61
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.22 E-value=7.9e-11 Score=88.94 Aligned_cols=83 Identities=12% Similarity=0.158 Sum_probs=76.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|++++++ +|+++.+.+.||..|.+.|++.+|
T Consensus 226 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~g~~~~A 304 (368)
T 1fch_A 226 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL-QPGYIRSRYNLGISCINLGAHREA 304 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHCCCHHHH
Confidence 8889999999999999 999999988888744 99999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHhCCCC
Q psy16144 92 IDVSQTIMKAHPSY 105 (122)
Q Consensus 92 I~vc~kVL~~~P~y 105 (122)
+..++++++.+|+.
T Consensus 305 ~~~~~~al~~~~~~ 318 (368)
T 1fch_A 305 VEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999999988
No 62
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.22 E-value=5.3e-11 Score=93.76 Aligned_cols=101 Identities=9% Similarity=-0.011 Sum_probs=78.7
Q ss_pred HHHHHHHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHH-----------------HHhhC---------HHHHHHHHH
Q psy16144 11 IIQTIAEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATN-----------------IYNLF---------PDDAVVQYT 61 (122)
Q Consensus 11 ~~~~~~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~k-----------------A~e~l---------y~dAa~~ye 61 (122)
-++....++.+ .+.+.|+|++|...++ +++.+|++.. +|..+ |++|...|+
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34555556666 9999999999999999 9999998762 44422 999999999
Q ss_pred HHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 62 QACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 62 ~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
+|+++ +|+++.+.|++|.+|+..|++.+|+..++++++.+|+++.++..+
T Consensus 255 ~al~~-~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L 304 (338)
T 2if4_A 255 IVLTE-EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRREL 304 (338)
T ss_dssp HHHHH-CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------
T ss_pred HHHHh-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 99999 799999999999999999999999999999999999999887643
No 63
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.22 E-value=1.5e-10 Score=74.12 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=77.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
++.+.|++++|.++++ +++.+|+.+.++..+ +++|...|+++.+. .|+++.+.+.+|..|.+.|++.+|
T Consensus 44 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 44 AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-DPRSAEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHccHHHH
Confidence 7888999999999999 999999988877633 99999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHhCCCC
Q psy16144 92 IDVSQTIMKAHPSY 105 (122)
Q Consensus 92 I~vc~kVL~~~P~y 105 (122)
+..++++++.+|+.
T Consensus 123 ~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 123 IEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHSTTC
T ss_pred HHHHHHHHccCCCC
Confidence 99999999999963
No 64
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.22 E-value=2.8e-11 Score=92.35 Aligned_cols=92 Identities=12% Similarity=0.059 Sum_probs=83.7
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|..+ .+.+.|++++|.++++ +++.+|+++.+|..+ |++|...|++|.++ +|+++.+.+.||..|...
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~ 146 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLEL-QPNNLKALMALAVSYTNT 146 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHcc
Confidence 4445 8888999999999999 999999999999854 99999999999999 799999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++.+|+.+++++++.+|+++.+..
T Consensus 147 g~~~~A~~~~~~al~~~p~~~~~~~ 171 (365)
T 4eqf_A 147 SHQQDACEALKNWIKQNPKYKYLVK 171 (365)
T ss_dssp TCHHHHHHHHHHHHHHCHHHHCC--
T ss_pred ccHHHHHHHHHHHHHhCccchHHHh
Confidence 9999999999999999998877653
No 65
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=7.3e-11 Score=90.94 Aligned_cols=88 Identities=14% Similarity=0.107 Sum_probs=62.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
++.+.|++++|..+++ +++.+|.++.+|..+ +++|...|++|+++ +|+++.+.+.||..|.+.|++.+|
T Consensus 42 ~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~~A 120 (388)
T 1w3b_A 42 IHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL-KPDFIDGYINLAAALVAAGDMEGA 120 (388)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHSCSSHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHc-CcchHHHHHHHHHHHHHcCCHHHH
Confidence 6667777777777777 777777777666633 77777777777777 577777777777777777777777
Q ss_pred HHHHHHHHHhCCCCHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~ 110 (122)
++.++++++.+|+++.++.
T Consensus 121 ~~~~~~al~~~p~~~~~~~ 139 (388)
T 1w3b_A 121 VQAYVSALQYNPDLYCVRS 139 (388)
T ss_dssp HHHHHHHHHHCTTCTHHHH
T ss_pred HHHHHHHHHhCCCcHHHHH
Confidence 7777777777777666554
No 66
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.22 E-value=1.2e-10 Score=89.87 Aligned_cols=87 Identities=14% Similarity=-0.031 Sum_probs=80.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
++...|++++|.+.++ +++.+|+++.+|..+ +++|...|++|+++ +|+++.+.++||..+...|++.++
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~-~p~~~~~l~~l~~~~~~~g~~~ea 253 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK-DSGHPETLINLVVLSQHLGKPPEV 253 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCCHHH
T ss_pred HHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCCHHH
Confidence 5667799999999999 999999999988733 99999999999999 899999999999999999999874
Q ss_pred -HHHHHHHHHhCCCCHHHH
Q psy16144 92 -IDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 92 -I~vc~kVL~~~P~ypkir 109 (122)
...++++++.+|++|.++
T Consensus 254 a~~~~~~~~~~~P~~~~~~ 272 (291)
T 3mkr_A 254 TNRYLSQLKDAHRSHPFIK 272 (291)
T ss_dssp HHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCCChHHH
Confidence 688899999999999986
No 67
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.22 E-value=3.5e-11 Score=92.05 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=81.3
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
+..+ .+.+.|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|.++ +|+++.+.+.||..|...
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 7 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-DGQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHc
Confidence 4444 7888999999999999 999999999888743 99999999999999 799999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~yp 106 (122)
|++.+|+..++++++.+|+++
T Consensus 86 g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 86 ESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCccch
Confidence 999999999999999999874
No 68
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.21 E-value=3.1e-11 Score=84.48 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=72.1
Q ss_pred HHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy16144 31 PLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMK 100 (122)
Q Consensus 31 ~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~ 100 (122)
.+.+.++ +++.+|+...++..+ |++|...|++|+++ +|+++.+.+.||.+|...|++.+|++.|+++++
T Consensus 5 ~~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL-DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3445678 999999998888733 99999999999999 799999999999999999999999999999999
Q ss_pred hCCCCHHHHHH
Q psy16144 101 AHPSYPKVHKQ 111 (122)
Q Consensus 101 ~~P~ypkir~~ 111 (122)
.+|++|.+.-.
T Consensus 84 l~p~~~~~~~~ 94 (148)
T 2vgx_A 84 MDIXEPRFPFH 94 (148)
T ss_dssp HSTTCTHHHHH
T ss_pred cCCCCchHHHH
Confidence 99999988654
No 69
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.20 E-value=8.8e-11 Score=97.06 Aligned_cols=89 Identities=13% Similarity=0.070 Sum_probs=83.8
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
.|.+.|++++|.++++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||..|...|++.+|
T Consensus 15 ~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l-~p~~~~~~~~lg~~~~~~g~~~eA 93 (477)
T 1wao_1 15 DYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL-DKKYIKGYYRRAASNMALGKFRAA 93 (477)
T ss_dssp STTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-CTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHH
Confidence 7889999999999999 999999999888844 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~ 111 (122)
+..++++++.+|+++.++..
T Consensus 94 ~~~~~~al~~~p~~~~~~~~ 113 (477)
T 1wao_1 94 LRDYETVVKVKPHDKDAKMK 113 (477)
T ss_dssp HHHHHHHHHHSTTCTTHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999987654
No 70
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.20 E-value=2.1e-10 Score=89.06 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=86.7
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
..|..+ .|.+.|++++|.++++ +++.+|+++.+|..+ |++|...|+++.+. +|+++.+.+.||..|.
T Consensus 27 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~ 105 (450)
T 2y4t_A 27 EKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQL-KMDFTAARLQRGHLLL 105 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHH
Confidence 344555 8899999999999999 999999999888844 99999999999999 7999999999999999
Q ss_pred hcccHHHHHHHHHHHHHhCCCCH---HHHHHH
Q psy16144 84 RMKRYAEAIDVSQTIMKAHPSYP---KVHKQI 112 (122)
Q Consensus 84 k~kr~~~AI~vc~kVL~~~P~yp---kir~~i 112 (122)
+.|++.+|+.+++++++.+|+++ .++..+
T Consensus 106 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 106 KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 99999999999999999999998 665544
No 71
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.20 E-value=1.1e-10 Score=88.97 Aligned_cols=89 Identities=12% Similarity=0.136 Sum_probs=67.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcc--hHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISS--ATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps--~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~ 89 (122)
+|.+.|++++|.++++ +++.+|+ .+.+|..+ |++|...|+++++. +|+++.+.+.||..|.+.|++.
T Consensus 186 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~ 264 (365)
T 4eqf_A 186 SPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV-RPEDYSLWNRLGATLANGDRSE 264 (365)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHH
Confidence 6777788888888888 8888887 66666533 88888888888888 6888888888888888888888
Q ss_pred HHHHHHHHHHHhCCCCHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|+..|+++++.+|+++.+...
T Consensus 265 ~A~~~~~~al~~~p~~~~~~~~ 286 (365)
T 4eqf_A 265 EAVEAYTRALEIQPGFIRSRYN 286 (365)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHhcCCCchHHHHH
Confidence 8888888888888888776543
No 72
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.18 E-value=2.5e-10 Score=84.28 Aligned_cols=90 Identities=13% Similarity=0.050 Sum_probs=75.6
Q ss_pred HhcCCC-ChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHH
Q psy16144 22 LYLLPW-RWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~g-k~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~ 90 (122)
+|...| ++++|.+.++ +++.+|+.+.+|..+ |++|...|+++.+. .|+++.+.+.||..|...|++.+
T Consensus 99 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~~~~~~~ 177 (330)
T 3hym_B 99 YYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQL-MKGCHLPMLYIGLEYGLTNNSKL 177 (330)
T ss_dssp HHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-TTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHhhHHH
Confidence 777888 8888888888 888888888887744 88888888888888 58888888888888888888888
Q ss_pred HHHHHHHHHHhCCCCHHHHHHH
Q psy16144 91 AIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypkir~~i 112 (122)
|+..++++++.+|+++.+...+
T Consensus 178 A~~~~~~al~~~~~~~~~~~~l 199 (330)
T 3hym_B 178 AERFFSQALSIAPEDPFVMHEV 199 (330)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHH
Confidence 8888888888888888776543
No 73
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.18 E-value=1.9e-10 Score=86.88 Aligned_cols=91 Identities=9% Similarity=-0.014 Sum_probs=84.3
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
++.+ .|.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|+++.++ +|+++.+.+.||..|...
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLEL-KPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHc
Confidence 3444 8889999999999999 999999999988844 99999999999999 799999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
|++.+|+..++++++.+|+++.+.
T Consensus 146 g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 146 SLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHH
Confidence 999999999999999999998775
No 74
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.18 E-value=9.6e-11 Score=86.49 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=83.0
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhC---------cchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHH
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYI---------SSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQ 76 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~n---------ps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgy 76 (122)
++.+ +|.+.|++++|.+.++ +++.+ |..+.+|..+ +++|...|++++++ +|+++.+.+
T Consensus 196 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-~~~~~~~~~ 274 (330)
T 3hym_B 196 MHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVL-IPQNASTYS 274 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCSHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh-CccchHHHH
Confidence 4444 8899999999999999 99987 5555666533 99999999999999 799999999
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 77 KLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 77 kLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.||..|.+.|++.+|+..++++++.+|+++.++..+
T Consensus 275 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 310 (330)
T 3hym_B 275 AIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTML 310 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHH
Confidence 999999999999999999999999999999887643
No 75
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.18 E-value=4.4e-10 Score=78.58 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=52.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc-ccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM-KRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~-kr~~~ 90 (122)
.+.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|+++.+. .|+++.+.+.+|..|... |++.+
T Consensus 17 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~~~~~~~~ 95 (225)
T 2vq2_A 17 EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSI-KPDSAEINNNYGWFLCGRLNRPAE 95 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHhcCcHHH
Confidence 5666667777777776 666666666655532 66666677776666 466666666667666666 67777
Q ss_pred HHHHHHHHHH
Q psy16144 91 AIDVSQTIMK 100 (122)
Q Consensus 91 AI~vc~kVL~ 100 (122)
|+..++++++
T Consensus 96 A~~~~~~~~~ 105 (225)
T 2vq2_A 96 SMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 7776666666
No 76
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.17 E-value=6e-10 Score=82.21 Aligned_cols=85 Identities=13% Similarity=0.037 Sum_probs=75.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch---HHHHh-------h--------C--HHHHHHHHHHHHHhhCCCChHHH-----
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA---TNIYN-------L--------F--PDDAVVQYTQACRIIGTSDLALH----- 75 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~---~kA~e-------~--------l--y~dAa~~ye~Aw~l~~~~~~~vg----- 75 (122)
+|.+.|++++|.+.++ +++.+|++ +.++. . + +++|...|+++.+. .|+++.+.
T Consensus 61 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-~p~~~~~~~a~~~ 139 (261)
T 3qky_A 61 AYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-YPNHELVDDATQK 139 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-CTTCTTHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-CcCchhHHHHHHH
Confidence 8999999999999999 99998854 33333 3 5 89999999999999 79998887
Q ss_pred ------------HHHHHHHHhcccHHHHHHHHHHHHHhCCCCHH
Q psy16144 76 ------------QKLASLLLRMKRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 76 ------------ykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypk 107 (122)
+.+|..|.+.|++.+|+..|+++++.+|+++.
T Consensus 140 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 183 (261)
T 3qky_A 140 IRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPW 183 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCch
Confidence 99999999999999999999999999999654
No 77
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.17 E-value=2.1e-10 Score=93.97 Aligned_cols=88 Identities=8% Similarity=0.025 Sum_probs=83.1
Q ss_pred HhcCCCCh-HHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc-----
Q psy16144 22 LYLLPWRW-EPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM----- 85 (122)
Q Consensus 22 Lyi~~gk~-d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~----- 85 (122)
+|...|++ ++|++.++ +++.+|+++.+|..+ |++|..+|++|+++ +|+ +.+.+.||..|...
T Consensus 111 ~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~-~~~~~~lg~~~~~~~~~~~ 188 (474)
T 4abn_A 111 ALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH-CKN-KVSLQNLSMVLRQLQTDSG 188 (474)
T ss_dssp HHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-CCC-HHHHHHHHHHHTTCCCSCH
T ss_pred HHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCC-HHHHHHHHHHHHHhccCCh
Confidence 89999999 99999999 999999999999855 99999999999999 688 79999999999999
Q ss_pred ----ccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 86 ----KRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 86 ----kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++.+|+..++++++.+|+++.++..
T Consensus 189 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 218 (474)
T 4abn_A 189 DEHSRHVMDSVRQAKLAVQMDVLDGRSWYI 218 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999999999988653
No 78
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.17 E-value=2.7e-10 Score=83.92 Aligned_cols=82 Identities=20% Similarity=0.287 Sum_probs=76.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|...|++++|.++++ +++.+|+++.+|..+ +++|...|+++++. .|+++.+.+.||..|.+.|++.+|
T Consensus 181 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~~g~~~~A 259 (327)
T 3cv0_A 181 LYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDI-NPGYVRVMYNMAVSYSNMSQYDLA 259 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHhccHHHH
Confidence 8889999999999999 999999988888744 99999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHhCCC
Q psy16144 92 IDVSQTIMKAHPS 104 (122)
Q Consensus 92 I~vc~kVL~~~P~ 104 (122)
+..++++++.+|+
T Consensus 260 ~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 260 AKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCc
Confidence 9999999999998
No 79
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.15 E-value=1.4e-10 Score=79.25 Aligned_cols=78 Identities=13% Similarity=0.093 Sum_probs=67.7
Q ss_pred HHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy16144 33 SAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 33 ~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~ 102 (122)
...|+ +++.+|+...++..+ |++|...|+++++. +|+++.+.+.||.+|.+.|++.+|+..|+++++.+
T Consensus 4 ~~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 4 GGTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML-DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp -----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh-CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 45778 899999988877633 99999999999999 79999999999999999999999999999999999
Q ss_pred CCCHHHHHH
Q psy16144 103 PSYPKVHKQ 111 (122)
Q Consensus 103 P~ypkir~~ 111 (122)
|++|.+...
T Consensus 83 p~~~~~~~~ 91 (142)
T 2xcb_A 83 INEPRFPFH 91 (142)
T ss_dssp TTCTHHHHH
T ss_pred CCCcHHHHH
Confidence 999998654
No 80
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.15 E-value=4.1e-10 Score=81.21 Aligned_cols=87 Identities=21% Similarity=0.196 Sum_probs=52.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|...|++++|.+.++ +++.+|....++..+ +++|...|+++++. +|+++.+.+.||..|...|++.+|
T Consensus 46 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~~g~~~~A 124 (252)
T 2ho1_A 46 GYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALAS-DSRNARVLNNYGGFLYEQKRYEEA 124 (252)
T ss_dssp HHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-CcCcHHHHHHHHHHHHHHhHHHHH
Confidence 5556666666666666 666666655555522 66666666666666 466666666666666666666666
Q ss_pred HHHHHHHHH--hCCCCHHHH
Q psy16144 92 IDVSQTIMK--AHPSYPKVH 109 (122)
Q Consensus 92 I~vc~kVL~--~~P~ypkir 109 (122)
++.++++++ .+|+.+.+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~ 144 (252)
T 2ho1_A 125 YQRLLEASQDTLYPERSRVF 144 (252)
T ss_dssp HHHHHHHTTCTTCTTHHHHH
T ss_pred HHHHHHHHhCccCcccHHHH
Confidence 666666665 445444443
No 81
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.15 E-value=4.8e-10 Score=79.36 Aligned_cols=81 Identities=11% Similarity=0.028 Sum_probs=73.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
.+.+.|++++|.+.++ ++ +| .+.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+.|++.+|
T Consensus 15 ~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~lg~~~~~~~~~~~A 90 (213)
T 1hh8_A 15 LAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINR-DKHLAVAYFQRGMLYYQTEKYDLA 90 (213)
T ss_dssp HHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CccchHHHHHHHHHHHHcccHHHH
Confidence 8889999999999999 86 44 35566533 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCH
Q psy16144 92 IDVSQTIMKAHPSYP 106 (122)
Q Consensus 92 I~vc~kVL~~~P~yp 106 (122)
+..++++++..|+++
T Consensus 91 ~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 91 IKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHhCCCcc
Confidence 999999999999876
No 82
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.15 E-value=7.2e-10 Score=77.49 Aligned_cols=88 Identities=7% Similarity=-0.230 Sum_probs=69.3
Q ss_pred HhcCC-CChHHHHHHHH-HHh--hCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccH
Q psy16144 22 LYLLP-WRWEPLSAGLR-KKQ--YISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRY 88 (122)
Q Consensus 22 Lyi~~-gk~d~A~elL~-~l~--~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~ 88 (122)
+|... |++++|.++++ +++ .+|+...++..+ +++|...|+++++. .|+++.+.+.||..|.+.|++
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 85 FLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA-QPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp HHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCchHHHHHHHHHHHcCCH
Confidence 77788 88888888888 887 556556666533 88888888888888 588888888888888888888
Q ss_pred HHHHHHHHHHHHhCC-CCHHHHH
Q psy16144 89 AEAIDVSQTIMKAHP-SYPKVHK 110 (122)
Q Consensus 89 ~~AI~vc~kVL~~~P-~ypkir~ 110 (122)
.+|++.++++++.+| +++.+..
T Consensus 164 ~~A~~~~~~~~~~~~~~~~~~~~ 186 (225)
T 2vq2_A 164 GDADYYFKKYQSRVEVLQADDLL 186 (225)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHH
Confidence 888888888888888 7777653
No 83
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.15 E-value=2.1e-11 Score=104.40 Aligned_cols=86 Identities=14% Similarity=-0.026 Sum_probs=49.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|++..+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+.|++.+
T Consensus 442 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-~P~~~~~~~~lg~~~~~~g~~~~- 519 (681)
T 2pzi_A 442 ALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDT-FPGELAPKLALAATAELAGNTDE- 519 (681)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-STTCSHHHHHHHHHHHHHTCCCT-
T ss_pred HHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHcCChHH-
Confidence 5555566666666666 666666655555532 55555555555555 45555555555555555555555
Q ss_pred HHHHHHHHHhCCCCHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir 109 (122)
++.|+++++.+|+++.++
T Consensus 520 ~~~~~~al~~~P~~~~a~ 537 (681)
T 2pzi_A 520 HKFYQTVWSTNDGVISAA 537 (681)
T ss_dssp TCHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCCchHHHH
Confidence 555555555555555543
No 84
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.14 E-value=2.7e-10 Score=77.86 Aligned_cols=72 Identities=15% Similarity=0.167 Sum_probs=64.1
Q ss_pred HHhhCcchHHHHh-----hC----HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHH
Q psy16144 38 KKQYISSATNIYN-----LF----PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 38 ~l~~nps~~kA~e-----~l----y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypki 108 (122)
+...||+.+.+|. ++ |++|+..|++|+++ +|+++.+.+.+|.+|.+.|++.+|++.|+++++.+|+++++
T Consensus 5 ~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 5 LAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR-DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp --CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 3457888877775 22 99999999999999 79999999999999999999999999999999999999988
Q ss_pred HH
Q psy16144 109 HK 110 (122)
Q Consensus 109 r~ 110 (122)
..
T Consensus 84 ~~ 85 (126)
T 4gco_A 84 YI 85 (126)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 85
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.14 E-value=2.9e-10 Score=93.07 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=84.8
Q ss_pred HHHH--HhcCC---------CChHHHHHHHH-HHhhCcchHHHHhhC-----------------HHHHHHHHHHHHHhhC
Q psy16144 18 WHFL--LYLLP---------WRWEPLSAGLR-KKQYISSATNIYNLF-----------------PDDAVVQYTQACRIIG 68 (122)
Q Consensus 18 ~~~L--Lyi~~---------gk~d~A~elL~-~l~~nps~~kA~e~l-----------------y~dAa~~ye~Aw~l~~ 68 (122)
+..+ +|.+. |++++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +
T Consensus 173 ~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-~ 251 (474)
T 4abn_A 173 LQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV-D 251 (474)
T ss_dssp HHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-C
T ss_pred HHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh-C
Confidence 4444 88898 99999999999 999999999988732 78999999999999 7
Q ss_pred C---CChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 69 T---SDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 69 ~---~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
| +++.+.+.||..|.+.|++.+|++.++++++.+|+++.++..
T Consensus 252 p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~ 297 (474)
T 4abn_A 252 RKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQR 297 (474)
T ss_dssp GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 9 999999999999999999999999999999999999987643
No 86
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.14 E-value=7.4e-10 Score=79.84 Aligned_cols=88 Identities=14% Similarity=0.211 Sum_probs=66.7
Q ss_pred HhcCCCChHHHHHHHH-HHh--hCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQ--YISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~--~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~ 89 (122)
+|.+.|++++|.++++ +++ .+|....++..+ +++|...|+++++. .|.++.+.+.||..|.+.|++.
T Consensus 114 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~g~~~ 192 (252)
T 2ho1_A 114 FLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL-NRNQPSVALEMADLLYKEREYV 192 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CSCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHcCCHH
Confidence 6777788888888888 777 677766666533 77888888888877 5777778888888888888888
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~ 110 (122)
+|++.++++++.+|+++.+..
T Consensus 193 ~A~~~~~~~~~~~~~~~~~~~ 213 (252)
T 2ho1_A 193 PARQYYDLFAQGGGQNARSLL 213 (252)
T ss_dssp HHHHHHHHHHTTSCCCHHHHH
T ss_pred HHHHHHHHHHHhCcCcHHHHH
Confidence 888888888887877776643
No 87
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.14 E-value=3.2e-10 Score=74.36 Aligned_cols=82 Identities=15% Similarity=0.035 Sum_probs=73.1
Q ss_pred HHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy16144 30 EPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIM 99 (122)
Q Consensus 30 d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL 99 (122)
++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+.|++.+|+..+++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF-DPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 57889999 999999999988844 99999999999999 79999999999999999999999999999999
Q ss_pred HhCCCC--HHHHHHH
Q psy16144 100 KAHPSY--PKVHKQI 112 (122)
Q Consensus 100 ~~~P~y--pkir~~i 112 (122)
+.+|+. +....++
T Consensus 81 ~~~~~~~~~~~~~~l 95 (115)
T 2kat_A 81 AAAQSRGDQQVVKEL 95 (115)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HhccccccHHHHHHH
Confidence 999854 4444444
No 88
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.13 E-value=7.1e-11 Score=101.18 Aligned_cols=91 Identities=8% Similarity=0.003 Sum_probs=84.8
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|+.+ +|.+.|++++|.+.|+ +++.+|+++.+|..+ |++ ...|++|+++ +|+++.+.+.||..|.+.
T Consensus 470 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~-~P~~~~a~~~lg~~~~~~ 547 (681)
T 2pzi_A 470 VWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWST-NDGVISAAFGLARARSAE 547 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHh-CCchHHHHHHHHHHHHHc
Confidence 4445 8899999999999999 999999999998844 889 9999999999 899999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++++|++.|+++++.+|+++.++.
T Consensus 548 g~~~~A~~~~~~al~l~P~~~~a~~ 572 (681)
T 2pzi_A 548 GDRVGAVRTLDEVPPTSRHFTTARL 572 (681)
T ss_dssp TCHHHHHHHHHTSCTTSTTHHHHHH
T ss_pred CCHHHHHHHHHhhcccCcccHHHHH
Confidence 9999999999999999999998874
No 89
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.12 E-value=7.2e-10 Score=87.71 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=62.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|...|++++|.+.++ +++.+|+++.+|..+ |++|...|+++.+. +|+++.+.+.||..|...|++.+|
T Consensus 285 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~~g~~~~A 363 (537)
T 3fp2_A 285 TLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSL-NPENVYPYIQLACLLYKQGKFTES 363 (537)
T ss_dssp HTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHH
Confidence 6667777777777777 777777766666533 77777777777777 577777777777777777777777
Q ss_pred HHHHHHHHHhCCCCHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~ 110 (122)
+++++++++.+|+++.+..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~ 382 (537)
T 3fp2_A 364 EAFFNETKLKFPTLPEVPT 382 (537)
T ss_dssp HHHHHHHHHHCTTCTHHHH
T ss_pred HHHHHHHHHhCCCChHHHH
Confidence 7777777777777766554
No 90
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.12 E-value=3.3e-10 Score=82.87 Aligned_cols=92 Identities=9% Similarity=-0.022 Sum_probs=79.0
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchH---HHHhhC---------HHHHHHHHHHHHHhhCCCChH---HHHHH
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSAT---NIYNLF---------PDDAVVQYTQACRIIGTSDLA---LHQKL 78 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~---kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~---vgykL 78 (122)
.++.+ .+.+.|+|++|.+.|+ +++.+|+++ .++..+ |++|+..|+++.+. .|+++. +.|.+
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-~P~~~~~~~a~~~~ 84 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL-NPTHPNIDYVMYMR 84 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-CcCCCcHHHHHHHH
Confidence 34555 7888999999999999 999999864 455432 99999999999999 799886 78999
Q ss_pred HHHHHh------------------cccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 79 ASLLLR------------------MKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 79 A~~ylk------------------~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
|.+|.+ .|++.+|+..++++++.+|+++.+.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 85 GLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 999886 6899999999999999999998764
No 91
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.12 E-value=4.1e-10 Score=81.83 Aligned_cols=87 Identities=17% Similarity=0.230 Sum_probs=47.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH----HHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN----IYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k----A~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr 87 (122)
+|.+.|++++|.+.++ +++ .|..+. +|..+ |++|...|+++.+. +|+++.+.+.||..|.+.|+
T Consensus 46 ~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~~~~ 123 (272)
T 3u4t_A 46 CYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR-DTTRLDMYGQIGSYFYNKGN 123 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHccC
Confidence 5555555555555555 555 222211 12211 55666666666665 45556666666666666666
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 88 YAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 88 ~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
+.+|+..++++++.+|+++.+..
T Consensus 124 ~~~A~~~~~~al~~~~~~~~~~~ 146 (272)
T 3u4t_A 124 FPLAIQYMEKQIRPTTTDPKVFY 146 (272)
T ss_dssp HHHHHHHHGGGCCSSCCCHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcHHHHH
Confidence 66666666666666665555544
No 92
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.12 E-value=5.1e-10 Score=82.47 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=81.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
.+.+.|++++|.++++ +++.+|+.+.+|..+ +++|...|+++.+. +|+++.+.+.||..|...|++.+|
T Consensus 30 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~~~~~~~A 108 (327)
T 3cv0_A 30 SMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARML-DPKDIAVHAALAVSHTNEHNANAA 108 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CcCCHHHHHHHHHHHHHcCCHHHH
Confidence 7888999999999999 999999999888744 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~i 112 (122)
+..++++++.+|+++.+....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 109 LASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp HHHHHHHHHTSTTTTTC----
T ss_pred HHHHHHHHHhCCccHHHHHHH
Confidence 999999999999988776443
No 93
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=1.1e-09 Score=85.02 Aligned_cols=90 Identities=12% Similarity=0.125 Sum_probs=81.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH----HHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN----IYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k----A~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr 87 (122)
++...|++++|.++++ +++.+|+++. ++..+ +++|...|+++.++ +|+++.+.+.||..|.+.|+
T Consensus 266 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~-~p~~~~~~~~l~~~~~~~~~ 344 (450)
T 2y4t_A 266 ELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM-EPDNVNALKDRAEAYLIEEM 344 (450)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHhcC
Confidence 7888999999999999 9999999754 33322 99999999999999 79999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 88 YAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 88 ~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
+.+|+..++++++.+|+++.++..+
T Consensus 345 ~~~A~~~~~~al~~~p~~~~~~~~l 369 (450)
T 2y4t_A 345 YDEAIQDYETAQEHNENDQQIREGL 369 (450)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHH
Confidence 9999999999999999999987543
No 94
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.11 E-value=9.7e-10 Score=88.51 Aligned_cols=93 Identities=14% Similarity=0.070 Sum_probs=82.3
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhh------Ccch-HHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHH
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQY------ISSA-TNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKL 78 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~------nps~-~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykL 78 (122)
|..+ +|.+.|++++|.++++ +++. +|+. ..+|..+ +++|...|+++.++ +|+++.+.+.|
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-~p~~~~~~~~l 556 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL-STNDANVHTAI 556 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-SSCCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CCCChHHHHHH
Confidence 4445 8999999999999999 9998 5553 5566533 99999999999999 69999999999
Q ss_pred HHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 79 ASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 79 A~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|..|.+.|++.+|++.++++++.+|+++.++..
T Consensus 557 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~ 589 (597)
T 2xpi_A 557 ALVYLHKKIPGLAITHLHESLAISPNEIMASDL 589 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHH
Confidence 999999999999999999999999999988753
No 95
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.3e-09 Score=85.27 Aligned_cols=99 Identities=9% Similarity=0.010 Sum_probs=85.8
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
..|..+ .|.+.|+|++|.+.++ +++.+|+ +.+|..+ |++|...|+++.++ +|+++.+.+.+|..|.
T Consensus 7 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~ 84 (514)
T 2gw1_A 7 LALKDKGNQFFRNKKYDDAIKYYNWALELKED-PVFYSNLSACYVSVGDLKKVVEMSTKALEL-KPDYSKVLLRRASANE 84 (514)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHH
Confidence 344555 8899999999999999 9999995 7777643 99999999999999 7999999999999999
Q ss_pred hcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy16144 84 RMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKA 116 (122)
Q Consensus 84 k~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka 116 (122)
+.|++.+|+..++++++.+|..+......+...
T Consensus 85 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (514)
T 2gw1_A 85 GLGKFADAMFDLSVLSLNGDFNDASIEPMLERN 117 (514)
T ss_dssp HTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHhcCCCccchHHHHHHHH
Confidence 999999999999999999997766655555443
No 96
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.09 E-value=4.9e-10 Score=81.45 Aligned_cols=87 Identities=11% Similarity=0.052 Sum_probs=79.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHH-HHHHhcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLA-SLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA-~~ylk~kr~~~ 90 (122)
+|.+.|++++|.+.++ +++.+|+.+.+|..+ |++|...|+++.++ +|+++.+.+.|| ..|.. +++.+
T Consensus 83 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~-~~~~~ 160 (272)
T 3u4t_A 83 ILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP-TTTDPKVFYELGQAYYYN-KEYVK 160 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS-SCCCHHHHHHHHHHHHHT-TCHHH
T ss_pred HHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc-CCCcHHHHHHHHHHHHHH-HHHHH
Confidence 8999999999999999 999999999888744 99999999999999 799999999999 65555 59999
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q psy16144 91 AIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypkir~ 110 (122)
|+..++++++.+|+++....
T Consensus 161 A~~~~~~a~~~~p~~~~~~~ 180 (272)
T 3u4t_A 161 ADSSFVKVLELKPNIYIGYL 180 (272)
T ss_dssp HHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHhCccchHHHH
Confidence 99999999999999987643
No 97
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.09 E-value=5.2e-10 Score=80.97 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=79.8
Q ss_pred HhcCCCChHHHHHHHH-HHhh----CcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQY----ISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~----nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr 87 (122)
++..+|++++|.+.++ +++. +|..+.+|..+ |++|...|++|.++ +|+++.+.+.||..|...|+
T Consensus 14 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 14 PLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI-RPDMPEVFNYLGIYLTQAGN 92 (275)
T ss_dssp CCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHTTC
T ss_pred ccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHHccC
Confidence 4457799999999999 9997 45667777643 99999999999999 79999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 88 YAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 88 ~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
+.+|+..++++++.+|+++.+...+
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~l 117 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNR 117 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHHH
Confidence 9999999999999999999876543
No 98
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.03 E-value=2.9e-09 Score=85.75 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=81.8
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
-|..+ +|.+.|++++|.++++ +++.+|++..+|..+ +++|...|+++.+. +|+++.+.+.||..|.+
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 453 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARL-FQGTHLPYLFLGMQHMQ 453 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-TTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CccchHHHHHHHHHHHH
Confidence 34445 8888999999999999 999999988888744 89999999999998 68899999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
.|++++|+.+++++++.+|++|.+...+
T Consensus 454 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l 481 (597)
T 2xpi_A 454 LGNILLANEYLQSSYALFQYDPLLLNEL 481 (597)
T ss_dssp HTCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 9999999999999999999988776544
No 99
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.03 E-value=3.4e-09 Score=77.46 Aligned_cols=86 Identities=8% Similarity=0.070 Sum_probs=76.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH---HHhh-------------------------C--HHHHHHHHHHHHHhhCCC
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN---IYNL-------------------------F--PDDAVVQYTQACRIIGTS 70 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k---A~e~-------------------------l--y~dAa~~ye~Aw~l~~~~ 70 (122)
+|.+.|++++|.+.++ +++.+|+++. |+.. . +++|...|+++++. .|+
T Consensus 50 ~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-~P~ 128 (225)
T 2yhc_A 50 AYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG-YPN 128 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT-CTT
T ss_pred HHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH-CcC
Confidence 8899999999999999 9999999875 4431 2 78999999999999 799
Q ss_pred ChHHH-----------------HHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHH
Q psy16144 71 DLALH-----------------QKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 71 ~~~vg-----------------ykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypki 108 (122)
++.+. +.+|..|.+.|++.+|+..++++++.+|+.|..
T Consensus 129 ~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 183 (225)
T 2yhc_A 129 SQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQAT 183 (225)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCcc
Confidence 98765 688999999999999999999999999999854
No 100
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.02 E-value=2e-09 Score=88.60 Aligned_cols=88 Identities=11% Similarity=0.044 Sum_probs=81.6
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|..+ +|.+.|++++|.+.++ +++.+|++..+|..+ +++|...|++|+++ +|+++.+.+.||..|...
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQL-LPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHh
Confidence 4445 8899999999999999 999999999888744 99999999999999 799999999999999999
Q ss_pred ---ccHHHHHHHHHHHHHhCCCCH
Q psy16144 86 ---KRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 86 ---kr~~~AI~vc~kVL~~~P~yp 106 (122)
|++++|++.++++++.+|++.
T Consensus 139 ~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 139 CDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp TCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred hccccHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999863
No 101
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.02 E-value=3.9e-09 Score=83.51 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=82.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
++...|++++|.+.++ +++.+|+ ..+|..+ +++|...|+++.+. +|+++.+.+.+|..|...|++.+|
T Consensus 252 ~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A 329 (537)
T 3fp2_A 252 FHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDL-NPEYPPTYYHRGQMYFILQDYKNA 329 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcCCHHHH
Confidence 8889999999999999 9999999 7777643 99999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~ 111 (122)
++.++++++.+|+++.+...
T Consensus 330 ~~~~~~a~~~~~~~~~~~~~ 349 (537)
T 3fp2_A 330 KEDFQKAQSLNPENVYPYIQ 349 (537)
T ss_dssp HHHHHHHHHHCTTCSHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999987654
No 102
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=2.8e-09 Score=83.39 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
+++|...|+++.+. +|+++.+.+.||..|.+.|++.+|++.++++++.+|+++.+.
T Consensus 431 ~~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 431 FIEATNLLEKASKL-DPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 44455555555544 344455555555555555555555555555555555444443
No 103
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.95 E-value=6e-09 Score=68.83 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|++|+++ +|+++.+.+.+|.+|.+.|++.+|++.|+++++.+|+++.+...
T Consensus 20 ~~~A~~~~~~al~~-~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (126)
T 3upv_A 20 WPNAVKAYTEMIKR-APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 77 (126)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 99999999999999 79999999999999999999999999999999999999988643
No 104
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.95 E-value=8e-09 Score=63.70 Aligned_cols=58 Identities=19% Similarity=0.330 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|++|++. +|+++.+.+.||..|.+.|++.+|+..++++++.+|+++.++..
T Consensus 25 ~~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 82 (91)
T 1na3_A 25 YDEAIEYYQKALEL-DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 82 (91)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 88888888888888 68889999999999999999999999999999999999988754
No 105
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.94 E-value=2e-09 Score=82.21 Aligned_cols=67 Identities=16% Similarity=0.119 Sum_probs=55.9
Q ss_pred HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q psy16144 38 KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSY 105 (122)
Q Consensus 38 ~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~y 105 (122)
....-|+...++..+ +++|...|++|++. +|+++.+.+.||..|+..|++++|+++++++++.+|++
T Consensus 109 l~~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~-~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~ 184 (287)
T 3qou_A 109 LDXVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQL-SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDT 184 (287)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSH
T ss_pred HHHHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHh-CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcch
Confidence 334447766665522 99999999999999 79999999999999999999999999888887777744
No 106
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.93 E-value=7.1e-10 Score=70.52 Aligned_cols=56 Identities=9% Similarity=0.175 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhhCCCChH-HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLA-LHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~-vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
|++|...|+++++. +|+++. +.+.+|.+|.+.|++.+|+..++++++.+|+++.++
T Consensus 16 ~~~A~~~~~~al~~-~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 16 IENALQALEEFLQT-EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHHHHH-CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 77777777887777 677777 888888888888888888888888888888887765
No 107
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.92 E-value=1.1e-08 Score=68.80 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=71.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHH--HHHHHHHHhcccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALH--QKLASLLLRMKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vg--ykLA~~ylk~kr~~ 89 (122)
+|.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|++++++ +|+++.+. +.++..+.+.|++.
T Consensus 56 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-~p~~~~~~~~~~~~~~~~~~~~~~ 134 (166)
T 1a17_A 56 AYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-KPHDKDAKMKYQECNKIVKQKAFE 134 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999 999999999888744 99999999999999 79999888 55555699999999
Q ss_pred HHHHHHHHHHHhC
Q psy16144 90 EAIDVSQTIMKAH 102 (122)
Q Consensus 90 ~AI~vc~kVL~~~ 102 (122)
+|+..+.++....
T Consensus 135 ~A~~~~~~~~~~~ 147 (166)
T 1a17_A 135 RAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHcccchHHHh
Confidence 9999999877554
No 108
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.92 E-value=3.5e-09 Score=80.55 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=69.9
Q ss_pred HHHH--HhcCC-CChHHHHHHHH-HHhhCcch------HHHHhhC---------HHHHHHHHHHHHHhhCCCChH-----
Q psy16144 18 WHFL--LYLLP-WRWEPLSAGLR-KKQYISSA------TNIYNLF---------PDDAVVQYTQACRIIGTSDLA----- 73 (122)
Q Consensus 18 ~~~L--Lyi~~-gk~d~A~elL~-~l~~nps~------~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~----- 73 (122)
++.+ +|.+. |++++|.+.++ +++.+|+. ..++..+ |++|...|+++.++ .|+++.
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~~ 198 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKS-SMGNRLSQWSL 198 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-TSSCTTTGGGH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HhcCCcccHHH
Confidence 4445 88886 99999999999 99998864 2333321 99999999999999 577654
Q ss_pred --HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 74 --LHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 74 --vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
+.+++|.+|...|++++|+..|+++++.+|+++..+
T Consensus 199 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 236 (292)
T 1qqe_A 199 KDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSR 236 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcH
Confidence 568999999999999999999999999999988753
No 109
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.92 E-value=3.7e-09 Score=82.90 Aligned_cols=90 Identities=10% Similarity=-0.002 Sum_probs=79.8
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
-|..+ +|.+.|++++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+
T Consensus 198 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-~P~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 198 SHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL-YPNNKAAKTQLAVCQQR 276 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHH
Confidence 34445 9999999999999999 999999999999844 99999999999999 79999999999999999
Q ss_pred cccHHHH-HHHHHHHHHhCCCCHH
Q psy16144 85 MKRYAEA-IDVSQTIMKAHPSYPK 107 (122)
Q Consensus 85 ~kr~~~A-I~vc~kVL~~~P~ypk 107 (122)
.|++.+| ...|++++...++.|+
T Consensus 277 ~~~~~~a~~~~~~~~~~~~~~~~~ 300 (336)
T 1p5q_A 277 IRRQLAREKKLYANMFERLAEEEN 300 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhccc
Confidence 9999999 6689999876554443
No 110
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.91 E-value=3.2e-10 Score=72.34 Aligned_cols=52 Identities=19% Similarity=0.200 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSY 105 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~y 105 (122)
|++|...|++|+++ +|+++.+.+.+|.+|.+.|++.+|++.|+++++.+|++
T Consensus 20 ~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 20 YREAVHCYDQLITA-QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 66666677777776 57777777777777777777777777777777777776
No 111
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.90 E-value=6.8e-09 Score=81.45 Aligned_cols=85 Identities=13% Similarity=0.045 Sum_probs=66.0
Q ss_pred CCChHHHHHHHH-HHhhCcchHHHHhhC-------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 26 PWRWEPLSAGLR-KKQYISSATNIYNLF-------------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 26 ~gk~d~A~elL~-~l~~nps~~kA~e~l-------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
.|++++|.+.++ +++.+|+++.++..+ +++|...|++|.+. +|+++.+.+.||..|.+.|++.+|
T Consensus 188 ~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~-~~~~~~~~~~lg~~~~~~~~~~~A 266 (472)
T 4g1t_A 188 WPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEK-APGVTDVLRSAAKFYRRKDEPDKA 266 (472)
T ss_dssp SCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHH-CSSCHHHHHHHHHHHHHTTCHHHH
T ss_pred chHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHcCchHHH
Confidence 344455555555 555555544443311 67899999999999 799999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHH
Q psy16144 92 IDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 92 I~vc~kVL~~~P~ypkir~~ 111 (122)
++.++++++.+|+++.+...
T Consensus 267 ~~~~~~al~~~p~~~~~~~~ 286 (472)
T 4g1t_A 267 IELLKKALEYIPNNAYLHCQ 286 (472)
T ss_dssp HHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHhCCChHHHHHH
Confidence 99999999999999988654
No 112
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.89 E-value=1.6e-08 Score=77.05 Aligned_cols=88 Identities=9% Similarity=0.002 Sum_probs=52.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH-HHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh-cccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN-IYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR-MKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k-A~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk-~kr~~ 89 (122)
++.+.|++++|.+.++ +++.+|..+. +|..+ +++|...|++|.+. +|.++.+....|....+ .|++.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-~p~~~~~~~~~a~~~~~~~~~~~ 186 (308)
T 2ond_A 108 YEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-ARTRHHVYVTAALMEYYCSKDKS 186 (308)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS-TTCCTHHHHHHHHHHHHTSCCHH
T ss_pred HHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHcCCHH
Confidence 5566677777777777 7777666554 55422 66666666666666 45555555444444322 46666
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~ 110 (122)
+|+.+|+++++.+|++|.++.
T Consensus 187 ~A~~~~~~al~~~p~~~~~~~ 207 (308)
T 2ond_A 187 VAFKIFELGLKKYGDIPEYVL 207 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHH
Confidence 666666666666666665543
No 113
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.88 E-value=1.8e-08 Score=63.88 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=69.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH-HHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN-IYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k-A~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~ 90 (122)
.+.+.|++++|.+.++ +++.+|+++. +|..+ |++|...|++|+++ +|+++.+.+. +.+.+
T Consensus 9 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~--------~~~~~ 79 (99)
T 2kc7_A 9 ELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL-NPDSPALQAR--------KMVMD 79 (99)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTSTHHHHH--------HHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCcHHHHHH--------HHHHH
Confidence 6778899999999999 9999999998 88744 99999999999999 7999988754 78899
Q ss_pred HHHHHHHHHHhCCCCHH
Q psy16144 91 AIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypk 107 (122)
|+..++++++.+|+.+.
T Consensus 80 a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 80 ILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp HHHHHCCTTHHHHCCSS
T ss_pred HHHHHHHHhccCccccc
Confidence 99999999999998764
No 114
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.88 E-value=1.6e-08 Score=66.77 Aligned_cols=58 Identities=16% Similarity=0.073 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|++|+++ +|+++.+.+.||.+|...|++.+|+..++++++.+|+++.++..
T Consensus 25 ~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 25 YPEAAACYGRAITR-NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhh-CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 99999999999999 79999999999999999999999999999999999999988654
No 115
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.88 E-value=2.8e-09 Score=72.48 Aligned_cols=55 Identities=16% Similarity=0.295 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypki 108 (122)
|++|+.+|++|+++ +|+++.+.+++|.+|.+.|+|.+|++.|+++++++|+++..
T Consensus 24 ~~~A~~~y~~Al~~-~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHh-CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 99999999999999 79999999999999999999999999999999999977643
No 116
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.88 E-value=2.4e-09 Score=69.89 Aligned_cols=66 Identities=12% Similarity=0.071 Sum_probs=56.2
Q ss_pred hCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHH
Q psy16144 41 YISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 41 ~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypk 107 (122)
.+|+++.+|..+ |++|...|++|+++ +|+++.+.+.||.+|.+.|++.+|++.++++++..|+.+.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVET-DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 367777777633 99999999999999 7999999999999999999999999999999999885443
No 117
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.3e-08 Score=64.78 Aligned_cols=81 Identities=7% Similarity=-0.114 Sum_probs=71.5
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCC------hHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSD------LALHQK 77 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~------~~vgyk 77 (122)
..|..+ .+.+.|+|++|.+.++ +++.+|+++.+|..+ |++|...|++|+++ +|++ +.+.+.
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-TSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-CSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CCCccHHHHHHHHHHH
Confidence 345555 8889999999999999 999999999988744 99999999999999 7999 899999
Q ss_pred HHHHHHhcccHHHHHHHHHH
Q psy16144 78 LASLLLRMKRYAEAIDVSQT 97 (122)
Q Consensus 78 LA~~ylk~kr~~~AI~vc~k 97 (122)
+|..+...|++.+|+..+++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHHH
Confidence 99999999999888875544
No 118
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.87 E-value=1.6e-08 Score=70.00 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|++|+++ +|+++.+.+.||.+|.+.|+|.+|+..|+++++.+|+++.++..
T Consensus 27 ~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 27 YSKAIDLYTQALSI-APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp HHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999 79999999999999999999999999999999999999988653
No 119
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.86 E-value=1.3e-08 Score=63.87 Aligned_cols=58 Identities=14% Similarity=0.242 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC--CHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPS--YPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~--ypkir~~ 111 (122)
|++|...|++++++ .|+++.+.+.+|..|...|++.+|+..++++++.+|+ ++.+...
T Consensus 22 ~~~A~~~~~~a~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 22 YTESIDLFEKAIQL-DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp HHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 99999999999999 7999999999999999999999999999999999999 8887653
No 120
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.86 E-value=1.1e-08 Score=73.29 Aligned_cols=84 Identities=13% Similarity=0.029 Sum_probs=72.4
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHhh-------CCC
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRII-------GTS 70 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l~-------~~~ 70 (122)
+..+ +|...|++++|.++++ +++. +|..+.++..+ |++|...|++|.++. +|.
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 125 (283)
T 3edt_B 46 LNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD 125 (283)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 4444 8889999999999999 9987 36666666633 999999999999984 366
Q ss_pred ChHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 71 DLALHQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 71 ~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
.+.+.+.||..|...|++.+|++.++++++.
T Consensus 126 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999998
No 121
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.86 E-value=1.2e-08 Score=80.06 Aligned_cols=84 Identities=18% Similarity=0.072 Sum_probs=75.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC----------------------------HHHHHHHHHHHHHhhCCCCh
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF----------------------------PDDAVVQYTQACRIIGTSDL 72 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l----------------------------y~dAa~~ye~Aw~l~~~~~~ 72 (122)
+|.+.|++++|.+.++ +++.+|+++.++..+ +++|...|++|.++ +|.++
T Consensus 256 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-~~~~~ 334 (472)
T 4g1t_A 256 FYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEA-NDNLF 334 (472)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHH-CTTTC
T ss_pred HHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhc-CCchh
Confidence 8889999999999999 999999988877522 67899999999999 79999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCH
Q psy16144 73 ALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 73 ~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~yp 106 (122)
.+.+.||..|.+.|++.+|++.|+++|+.+|+..
T Consensus 335 ~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 335 RVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred hhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999998654
No 122
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.85 E-value=1.5e-08 Score=74.07 Aligned_cols=83 Identities=12% Similarity=0.097 Sum_probs=73.1
Q ss_pred HhcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHh-----------------
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRI----------------- 66 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l----------------- 66 (122)
+|...|++++|.++++ +++. +|....++..+ +++|...|+++++.
T Consensus 162 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 241 (311)
T 3nf1_A 162 LCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIW 241 (311)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHH
Confidence 8999999999999999 9998 77777666633 99999999999986
Q ss_pred -------------------------------hCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 67 -------------------------------IGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 67 -------------------------------~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
.+|.++.+.+.||..|.+.|++.+|+..++++++..|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 242 MHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 35777888999999999999999999999999999885
No 123
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.84 E-value=1.4e-08 Score=77.39 Aligned_cols=85 Identities=7% Similarity=-0.012 Sum_probs=76.8
Q ss_pred CCCCh-------HHHHHHHH-HHh-hCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChH-HHHHHHHHHHhc
Q psy16144 25 LPWRW-------EPLSAGLR-KKQ-YISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLA-LHQKLASLLLRM 85 (122)
Q Consensus 25 ~~gk~-------d~A~elL~-~l~-~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~-vgykLA~~ylk~ 85 (122)
+.|++ ++|.+.++ +++ .+|++..+|..+ +++|...|++|+++ +|.++. +.+.+|..+.+.
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~~ 147 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI-EDIDPTLVYIQYMKFARRA 147 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-SSSCTHHHHHHHHHHHHHH
T ss_pred hccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHh
Confidence 35886 99999999 999 799999888733 99999999999998 799997 999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++.+|+.+++++++..|+++.+..
T Consensus 148 ~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 148 EGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp HCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 9999999999999999998877653
No 124
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.83 E-value=2.3e-08 Score=67.45 Aligned_cols=58 Identities=14% Similarity=0.107 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+++|...|++|++. +|+++.+.+.||.+|...|++.+|+..++++++.+|+++.++..
T Consensus 33 ~~~A~~~~~~al~~-~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~ 90 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAA 90 (121)
T ss_dssp HHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999 79999999999999999999999999999999999999988653
No 125
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.82 E-value=1.7e-08 Score=76.79 Aligned_cols=85 Identities=18% Similarity=0.049 Sum_probs=71.7
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHh-------h-C--HHHHHHHHHHHHHhhCCCC------hHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYN-------L-F--PDDAVVQYTQACRIIGTSD------LALHQKL 78 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e-------~-l--y~dAa~~ye~Aw~l~~~~~------~~vgykL 78 (122)
+|.+.|++++|.+.++ +++..|.. ..++. . + |++|..+|++|+++. |.+ ..+..+|
T Consensus 86 ~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~-~~~~~~~~~~~~~~~l 164 (292)
T 1qqe_A 86 CFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWY-AQDQSVALSNKCFIKC 164 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HhCCChHHHHHHHHHH
Confidence 8899999999999999 99988764 22332 2 3 899999999999994 543 4567899
Q ss_pred HHHHHhcccHHHHHHHHHHHHHhCCCCHH
Q psy16144 79 ASLLLRMKRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 79 A~~ylk~kr~~~AI~vc~kVL~~~P~ypk 107 (122)
|..|.+.|+|.+|++.|+++++.+|+.+.
T Consensus 165 g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 165 ADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999998765
No 126
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.82 E-value=3.4e-09 Score=74.52 Aligned_cols=88 Identities=10% Similarity=-0.053 Sum_probs=74.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH-hcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLL-RMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl-k~kr~~~ 90 (122)
.+.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|+++.+. .| ++.+...++...+ ..+...+
T Consensus 15 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~-~p-~~~~~~~~~~~~~~~~~~~~~ 92 (176)
T 2r5s_A 15 ELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLE-YQ-DNSYKSLIAKLELHQQAAESP 92 (176)
T ss_dssp HHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG-GC-CHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc-cC-ChHHHHHHHHHHHHhhcccch
Confidence 7888999999999999 999999999999844 99999999999999 58 8887766664433 3344456
Q ss_pred HHHHHHHHHHhCCCCHHHHHH
Q psy16144 91 AIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypkir~~ 111 (122)
|+..++++++.+|++|.++..
T Consensus 93 a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 93 ELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp HHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHH
Confidence 899999999999999988754
No 127
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.80 E-value=4.3e-08 Score=60.32 Aligned_cols=69 Identities=13% Similarity=0.186 Sum_probs=61.4
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.|+.+ +|.+.|++++|.+.++ +++.+|+++.+|..+ +++|...|+++.++ +|+++.+.+.||..|.+
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-DPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHh
Confidence 34455 8889999999999999 999999999888744 99999999999999 79999999999999987
Q ss_pred cc
Q psy16144 85 MK 86 (122)
Q Consensus 85 ~k 86 (122)
.|
T Consensus 90 ~g 91 (91)
T 1na3_A 90 QG 91 (91)
T ss_dssp HC
T ss_pred cC
Confidence 64
No 128
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.79 E-value=2.6e-09 Score=88.23 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=75.4
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHH--HH
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASL--LL 83 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~--yl 83 (122)
|..+ +|.+.|++++|.+.++ +++.+|+.+.+|..+ |++|...|++|+++ +|+++.+.+.|+.. +.
T Consensus 43 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 43 YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-KPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-STTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHH
Confidence 4445 8999999999999999 999999999998844 99999999999999 79999999999999 99
Q ss_pred hcccHHHHHHHHH-----------HHHHhCCCC
Q psy16144 84 RMKRYAEAIDVSQ-----------TIMKAHPSY 105 (122)
Q Consensus 84 k~kr~~~AI~vc~-----------kVL~~~P~y 105 (122)
+.|++.+|+++++ ++++.+|++
T Consensus 122 ~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 122 KQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999 999988876
No 129
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.76 E-value=4.6e-09 Score=82.62 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=43.9
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHH-Hh
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLL-LR 84 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~y-lk 84 (122)
|+.+ +|.+.|+|++|.+.++ +++.+|++.++|..+ |++|...|++|.++ +|+++.+...|+... ..
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l-~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY-APDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHH
Confidence 4445 8999999999999999 999999999999844 99999999999999 799999999999984 45
Q ss_pred cccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 85 MKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 85 ~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
.+....+...|++++...|++|..++
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~~~~ 337 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGAKSK 337 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 56778889999999999998876543
No 130
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.75 E-value=9.9e-08 Score=69.61 Aligned_cols=88 Identities=19% Similarity=0.169 Sum_probs=74.5
Q ss_pred HHHHHHH--HhcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHhh-------
Q psy16144 15 IAEWHFL--LYLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRII------- 67 (122)
Q Consensus 15 ~~~~~~L--Lyi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l~------- 67 (122)
+..+..+ .|...|++++|.++++ +++. +|....++..+ |++|...|++|+++.
T Consensus 27 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 27 LRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 3345555 8889999999999999 9985 67767776643 999999999999984
Q ss_pred CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy16144 68 GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 68 ~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~ 102 (122)
.+..+.+.+.||..|...|++.+|+..++++++..
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 141 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIR 141 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 35567889999999999999999999999999885
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.75 E-value=3.8e-09 Score=86.35 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=75.6
Q ss_pred CCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCC---------------hHHHHHHH
Q psy16144 25 LPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSD---------------LALHQKLA 79 (122)
Q Consensus 25 ~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~---------------~~vgykLA 79 (122)
..++|++|.+.++ .++.+|..+.+|..+ |++|...|++|+++ .|++ ..+.++||
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~-~p~~~~~~~~~~~~~~~~~~~~~~nla 324 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSW-LEMEYGLSEKESKASESFLLAAFLNLA 324 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-HTTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-hcccccCChHHHHHHHHHHHHHHHHHH
Confidence 4457888998899 888898888877633 99999999999999 5888 69999999
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
.+|++.|+|.+|+..|+++|+.+|+++++..
T Consensus 325 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~ 355 (457)
T 1kt0_A 325 MCYLKLREYTKAVECCDKALGLDSANEKGLY 355 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCccHHHHH
Confidence 9999999999999999999999999998864
No 132
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.75 E-value=4.1e-08 Score=70.35 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=73.4
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHhh-------CCC
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRII-------GTS 70 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l~-------~~~ 70 (122)
+..+ +|...|++++|.++++ +++. +|....++..+ |++|...|++++++. .|.
T Consensus 88 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 167 (283)
T 3edt_B 88 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPN 167 (283)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 4444 9999999999999999 9988 57766666633 999999999999982 355
Q ss_pred ChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 71 DLALHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 71 ~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
...+.+.||.+|.+.|++.+|+..++++++..|
T Consensus 168 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 168 VAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 677899999999999999999999999998744
No 133
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.70 E-value=7.8e-09 Score=68.35 Aligned_cols=59 Identities=20% Similarity=0.126 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhh--CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRII--GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~--~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|++|+++. +|+++.+.+.||.+|.+.|+|.+|+..++++++.+|++|.+...
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 66 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVF 66 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHH
Confidence 678999999999993 48889999999999999999999999999999999999988653
No 134
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.69 E-value=1.5e-07 Score=59.25 Aligned_cols=59 Identities=17% Similarity=0.243 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|++|...|+++++. .|+++.+.+.+|..|...|++.+|+..++++++.+|+++.+...+
T Consensus 20 ~~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (118)
T 1elw_A 20 IDDALQCYSEAIKL-DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRK 78 (118)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 99999999999999 699999999999999999999999999999999999999876543
No 135
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.68 E-value=1.5e-07 Score=60.03 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|+++++. .|+++.+.+.+|..|...|++.+|+..++++++.+|+++.+...
T Consensus 28 ~~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 28 FEAAVHFYGKAIEL-NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 99999999999999 69999999999999999999999999999999999999887654
No 136
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.68 E-value=9.3e-08 Score=61.74 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
|++|...|+++++. .|+++.+.+.+|..|...|++.+|+..++++++.+|+++.+...+
T Consensus 32 ~~~A~~~~~~al~~-~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 90 (133)
T 2lni_A 32 YPQAMKHYTEAIKR-NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRK 90 (133)
T ss_dssp SHHHHHHHHHHHTT-CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 99999999999999 799999999999999999999999999999999999999876543
No 137
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.66 E-value=9.1e-08 Score=67.99 Aligned_cols=83 Identities=8% Similarity=0.045 Sum_probs=65.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|+++.++..+ |++|...|++|.++ +|+++.+...|+.++.+.+++.++
T Consensus 97 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~~~~~~~ 175 (198)
T 2fbn_A 97 CYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASL-NPNNLDIRNSYELCVNKLKEARKK 175 (198)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999 999999999998854 99999999999999 799999999999999999999998
Q ss_pred H-HHHHHHHHhCCCC
Q psy16144 92 I-DVSQTIMKAHPSY 105 (122)
Q Consensus 92 I-~vc~kVL~~~P~y 105 (122)
. ..+.+++...+.|
T Consensus 176 ~~~~~~~~f~~~~~~ 190 (198)
T 2fbn_A 176 DKLTFGGMFDKGPLY 190 (198)
T ss_dssp ---------------
T ss_pred HHHHHHHHhcccchh
Confidence 8 6677777655544
No 138
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.65 E-value=8.4e-08 Score=66.13 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhh-----------------CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 53 PDDAVVQYTQACRII-----------------GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~-----------------~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++|+..|++|+++. +|.++.+.++||.+|++.|+|.+|+..|+++++.+|+++++..
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 101 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALF 101 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHH
Confidence 999999999999982 3667799999999999999999999999999999999998864
No 139
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.63 E-value=1e-07 Score=72.85 Aligned_cols=85 Identities=8% Similarity=0.011 Sum_probs=69.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHhhC---------HHHHHHHHHHHHHhhCCCCh------HHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYNLF---------PDDAVVQYTQACRIIGTSDL------ALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~------~vgykLA 79 (122)
+|.+ |++++|.++++ +++..|.. ..++..+ |++|..+|++|.++. +.++ .+.+.+|
T Consensus 125 ~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~g 202 (307)
T 2ifu_A 125 LMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMY-KEMENYPTCYKKCIAQV 202 (307)
T ss_dssp HHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHcCChhHHHHHHHHHH
Confidence 7878 99999999999 99988753 2333311 999999999999985 4332 3778899
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
.+|+..|++++|+..+++++ .+|+++..+
T Consensus 203 ~~~~~~g~~~~A~~~~~~al-~~p~~~~~~ 231 (307)
T 2ifu_A 203 LVQLHRADYVAAQKCVRESY-SIPGFSGSE 231 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHT-TSTTSTTSH
T ss_pred HHHHHcCCHHHHHHHHHHHh-CCCCCCCCH
Confidence 99999999999999999999 999887543
No 140
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.63 E-value=7.2e-08 Score=71.21 Aligned_cols=56 Identities=23% Similarity=0.321 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHhhCCC-------ChH-----HHHHHHHHHHhcccHHHHHHHHHHHHHh-------CCCCHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTS-------DLA-----LHQKLASLLLRMKRYAEAIDVSQTIMKA-------HPSYPKVH 109 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~-------~~~-----vgykLA~~ylk~kr~~~AI~vc~kVL~~-------~P~ypkir 109 (122)
|++|+.+|++|+++ +|+ +.. +.+++|.++.+.|+|.+|++.|+++|+. +|++++.+
T Consensus 27 ~eeAi~~Y~kAL~l-~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~ 101 (159)
T 2hr2_A 27 YDEAAANCRRAMEI-SHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLW 101 (159)
T ss_dssp HHHHHHHHHHHHHH-HTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHH
T ss_pred HHHHHHHHHHHHhh-CCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHH
Confidence 99999999999999 588 333 9999999999999999999999999999 99999988
No 141
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=1.9e-07 Score=61.53 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHhhCCCC---hHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSD---LALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~---~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|+++++. .|++ +.+.+.+|..|.+.|++.+|+..|+++++.+|+++.+...
T Consensus 44 ~~~A~~~~~~a~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 44 YGGALAAYTQALGL-DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp HHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHH-cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 99999999999999 6887 8999999999999999999999999999999999887643
No 142
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.63 E-value=8.1e-08 Score=63.92 Aligned_cols=55 Identities=18% Similarity=0.154 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKV 108 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypki 108 (122)
..+|...+++|+++ +|+++.+.+-||..+.+.|+|.+||+.++++|+.+|+.|..
T Consensus 25 ~~~A~~~l~~AL~~-dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~ 79 (93)
T 3bee_A 25 TDEVSLLLEQALQL-EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDR 79 (93)
T ss_dssp CHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCH
T ss_pred CHHHHHHHHHHHHH-CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccH
Confidence 57888999999999 79999999999999999999999999999999999985543
No 143
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.59 E-value=4.9e-07 Score=57.11 Aligned_cols=58 Identities=19% Similarity=0.301 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+++|...|+++++. .|+++.+.+.+|..|.+.|++.+|+..++++++.+|+++.+...
T Consensus 25 ~~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 1na0_A 25 YDEAIEYYQKALEL-DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYN 82 (125)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHH-CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 99999999999999 69999999999999999999999999999999999999877543
No 144
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.59 E-value=4.1e-07 Score=73.98 Aligned_cols=89 Identities=9% Similarity=-0.003 Sum_probs=61.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchH-HHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHH-HHhcccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSAT-NIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASL-LLRMKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~-kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~-ylk~kr~~ 89 (122)
++.+.|++++|.++++ +++.+|+++ .+|... +++|...|++|++. .|.++.+....|.. |...|++.
T Consensus 330 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~-~~~~~~~~~~~a~~~~~~~~~~~ 408 (530)
T 2ooe_A 330 YEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-ARTRHHVYVTAALMEYYCSKDKS 408 (530)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-TTCCTHHHHHHHHHHHHHTCCHH
T ss_pred HHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHcCChh
Confidence 6777888888888888 888888764 466522 67777777777776 45555555544443 33577777
Q ss_pred HHHHHHHHHHHhCCCCHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|..+++++|+.+|++|.++..
T Consensus 409 ~A~~~~e~al~~~p~~~~~~~~ 430 (530)
T 2ooe_A 409 VAFKIFELGLKKYGDIPEYVLA 430 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHH
Confidence 7777777777777777766543
No 145
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.59 E-value=1.5e-07 Score=68.39 Aligned_cols=90 Identities=12% Similarity=0.024 Sum_probs=74.3
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHH----HHhhC---------HHHHHHHHHHHHHhh-----CCCChHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATN----IYNLF---------PDDAVVQYTQACRII-----GTSDLAL 74 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~k----A~e~l---------y~dAa~~ye~Aw~l~-----~~~~~~v 74 (122)
..+... .+.+.|++++|.++++ +++.+|+++. ++..+ |++|...|++|.++. .+..+.+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 345555 8889999999999999 9999999753 33322 999999999999883 2344678
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q psy16144 75 HQKLASLLLRMKRYAEAIDVSQTIMKAHPSY 105 (122)
Q Consensus 75 gykLA~~ylk~kr~~~AI~vc~kVL~~~P~y 105 (122)
.+.||..|...|++.+|++.++++++..|..
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999987754
No 146
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.59 E-value=2e-07 Score=60.82 Aligned_cols=57 Identities=14% Similarity=0.219 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 54 DDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 54 ~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
.+|...|+++++. +|+++.+.+.||..|...|++.+|+..|+++++.+|+++.++..
T Consensus 2 ~~a~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 58 (115)
T 2kat_A 2 QAITERLEAMLAQ-GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKW 58 (115)
T ss_dssp CCHHHHHHHHHTT-TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHH
Confidence 3588999999999 79999999999999999999999999999999999999987643
No 147
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.58 E-value=4.1e-07 Score=59.25 Aligned_cols=53 Identities=11% Similarity=0.061 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHhhCCCCh---HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCH
Q psy16144 53 PDDAVVQYTQACRIIGTSDL---ALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~---~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~yp 106 (122)
|++|...|+++++. .|+++ .+.+.+|.+|.+.|++.+|++.++++++.+|+++
T Consensus 18 ~~~A~~~~~~~~~~-~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~ 73 (129)
T 2xev_A 18 YDDASQLFLSFLEL-YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 73 (129)
T ss_dssp HHHHHHHHHHHHHH-CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHHH-CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc
Confidence 99999999999999 69999 7999999999999999999999999999999993
No 148
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.57 E-value=1.8e-06 Score=72.74 Aligned_cols=89 Identities=7% Similarity=-0.103 Sum_probs=72.0
Q ss_pred HhcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHh----hCCCChHHH---H
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRI----IGTSDLALH---Q 76 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l----~~~~~~~vg---y 76 (122)
-+-.+|+|++|+++++ +|+. +|+-...+.-+ |++|...|++|++. -+|++|.++ .
T Consensus 318 ~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 397 (490)
T 3n71_A 318 KARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVM 397 (490)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 4668899999999999 8875 33333433321 99999999999864 368888875 5
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHHh-----CCCCHHHHH
Q psy16144 77 KLASLLLRMKRYAEAIDVSQTIMKA-----HPSYPKVHK 110 (122)
Q Consensus 77 kLA~~ylk~kr~~~AI~vc~kVL~~-----~P~ypkir~ 110 (122)
+||..|...|+|++|+..++++|++ -|++|.+..
T Consensus 398 nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 436 (490)
T 3n71_A 398 RAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKD 436 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHH
Confidence 8999999999999999999999975 689988865
No 149
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.56 E-value=1.7e-07 Score=71.97 Aligned_cols=87 Identities=14% Similarity=0.025 Sum_probs=73.7
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhCcchHH----HHhhC---------HHHHHHHHHHHHHhh-----CCCChHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYISSATN----IYNLF---------PDDAVVQYTQACRII-----GTSDLAL 74 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~k----A~e~l---------y~dAa~~ye~Aw~l~-----~~~~~~v 74 (122)
..+..+ .+.+.|++++|.++++ +++.+|+++. +|..+ |++|...|++|.++. .+....+
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 128 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKS 128 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHH
Confidence 334444 8889999999999999 9999999763 44422 999999999999983 3666788
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy16144 75 HQKLASLLLRMKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 75 gykLA~~ylk~kr~~~AI~vc~kVL~~~ 102 (122)
.+.||..|...|++.+|+..++++++..
T Consensus 129 ~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 129 SGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999883
No 150
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.54 E-value=3.6e-07 Score=72.75 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=73.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch--HHHHhhC---------HHHHHHHHHHHHHhhC-CC-ChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA--TNIYNLF---------PDDAVVQYTQACRIIG-TS-DLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~--~kA~e~l---------y~dAa~~ye~Aw~l~~-~~-~~~vgykLA~~ylk~kr 87 (122)
++.+.|+|++|+++|+ +.+..+.. ..++.++ +++|...|+++..-.. |. .+.+-+.+|.++.+.|+
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr 223 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN 223 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC
Confidence 8888888888888888 77653221 2344433 9999999999985422 44 56789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy16144 88 YAEAIDVSQTIMKAHPSYPKVHKQIFEK 115 (122)
Q Consensus 88 ~~~AI~vc~kVL~~~P~ypkir~~il~k 115 (122)
.++|+++++++++.+|+ +.++.-+-+.
T Consensus 224 ~deA~~~l~~a~a~~P~-~~~~~aL~~~ 250 (282)
T 4f3v_A 224 ESAAVALLEWLQTTHPE-PKVAAALKDP 250 (282)
T ss_dssp HHHHHHHHHHHHHHSCC-HHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCCc-HHHHHHHhCC
Confidence 99999999999999999 9888766543
No 151
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.53 E-value=1.6e-06 Score=65.26 Aligned_cols=82 Identities=13% Similarity=0.059 Sum_probs=62.7
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHhhC---------HHHHHHHHHHHHHhh--CCCCh----HHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYNLF---------PDDAVVQYTQACRII--GTSDL----ALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e~l---------y~dAa~~ye~Aw~l~--~~~~~----~vgykLA 79 (122)
+|...|++++|.+.++ +++..+.. ..++..+ |++|..+|++|+++. .++++ .+.+++|
T Consensus 124 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg 203 (293)
T 2qfc_A 124 YVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHA 203 (293)
T ss_dssp HHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHH
Confidence 7788899999999999 88765443 2333322 899999999998542 24433 5889999
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
.+|.+.|+|.+|+..++++++..+
T Consensus 204 ~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 204 KALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999987754
No 152
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.52 E-value=6e-07 Score=58.70 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=66.7
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH------HHhhC---------HHHHHHHHHHHHHhhCCCC------hHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN------IYNLF---------PDDAVVQYTQACRIIGTSD------LALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k------A~e~l---------y~dAa~~ye~Aw~l~~~~~------~~vgykLA 79 (122)
+|...|++++|.+.++ +++..+.... ++..+ |++|...|++|+++. +.. ..+.+.+|
T Consensus 18 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~l~ 96 (164)
T 3ro3_A 18 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLA-RQLKDRAVEAQSCYSLG 96 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHhCCcHHHHHHHHHHH
Confidence 7888999999999999 9988776432 33312 999999999999985 332 56788999
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
..|...|++.+|++.++++++..+
T Consensus 97 ~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 97 NTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999998754
No 153
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.51 E-value=5.7e-07 Score=58.81 Aligned_cols=83 Identities=8% Similarity=0.022 Sum_probs=67.7
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHhhC---------HHHHHHHHHHHHHhhCCC-----ChHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYNLF---------PDDAVVQYTQACRIIGTS-----DLALHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e~l---------y~dAa~~ye~Aw~l~~~~-----~~~vgykLA~ 80 (122)
+|...|++++|.++++ +++..++. ..++..+ |++|...|++++++.... .+.+.+.||.
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~ 137 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGN 137 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHH
Confidence 8899999999999999 99887663 2333322 999999999999885221 1457889999
Q ss_pred HHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
.|...|++.+|++.++++++....
T Consensus 138 ~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 138 AYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987654
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.50 E-value=4.3e-07 Score=70.31 Aligned_cols=82 Identities=10% Similarity=0.031 Sum_probs=70.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchH------HHHhhC---------HHHHHHHHHHHHHh----hC-CCChHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSAT------NIYNLF---------PDDAVVQYTQACRI----IG-TSDLALHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~------kA~e~l---------y~dAa~~ye~Aw~l----~~-~~~~~vgykLA~ 80 (122)
+|...|++++|.+.++ +++..|... .++..+ |++|..+|++|+++ .+ |..+.+.+.||.
T Consensus 193 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 272 (383)
T 3ulq_A 193 NFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQ 272 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 8999999999999999 998866543 233322 99999999999995 34 777889999999
Q ss_pred HHHhcccHHHHHHHHHHHHHhCC
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
+|.+.|++.+|+..++++++..+
T Consensus 273 ~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 273 IHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999854
No 155
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.50 E-value=4.2e-07 Score=69.20 Aligned_cols=58 Identities=16% Similarity=0.073 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
|++|...|++|+++ +|+++.+.+.+|.+|.+.|++.+|+..|+++++.+|+++++...
T Consensus 20 ~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (281)
T 2c2l_A 20 YPEAAACYGRAITR-NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 77 (281)
T ss_dssp HHHHHHHHHHHHHH-CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999 79999999999999999999999999999999999999988653
No 156
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.50 E-value=2.5e-07 Score=70.71 Aligned_cols=84 Identities=17% Similarity=0.104 Sum_probs=69.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHhhC--------HHHHHHHHHHHHHhhCCCC------hHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYNLF--------PDDAVVQYTQACRIIGTSD------LALHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e~l--------y~dAa~~ye~Aw~l~~~~~------~~vgykLA~ 80 (122)
+|.+.|++++|.+.++ +++..+.. ..++..+ |++|..+|++|+++. +.. ..+..+||.
T Consensus 85 ~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~g~~~~A~~~~~~Al~~~-~~~~~~~~~~~~~~~lg~ 163 (307)
T 2ifu_A 85 MLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVF-ENEERLRQAAELIGKASR 163 (307)
T ss_dssp HHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHH
Confidence 8889999999999999 99886532 2333322 899999999999985 433 567889999
Q ss_pred HHHhcccHHHHHHHHHHHHHhCCCCH
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKAHPSYP 106 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~~P~yp 106 (122)
+|.+.|+|.+|++.|+++++..|+.+
T Consensus 164 ~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 164 LLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999877543
No 157
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.50 E-value=4.8e-07 Score=70.00 Aligned_cols=87 Identities=15% Similarity=0.130 Sum_probs=69.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch-------HHHHhhC---------HHHHHHHHHHHHHhhCCCCh------HHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA-------TNIYNLF---------PDDAVVQYTQACRIIGTSDL------ALHQKL 78 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~-------~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~------~vgykL 78 (122)
+|...|++++|.+.++ +++..+.. ..++..+ |++|..+|++|+++. +... .+.+.|
T Consensus 152 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~l 230 (383)
T 3ulq_A 152 SYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMA-EAEKQPQLMGRTLYNI 230 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHcCChHHHHHHHHHH
Confidence 8889999999999999 99885543 2333322 999999999999985 4333 488999
Q ss_pred HHHHHhcccHHHHHHHHHHHHH-----hC-CCCHHHH
Q psy16144 79 ASLLLRMKRYAEAIDVSQTIMK-----AH-PSYPKVH 109 (122)
Q Consensus 79 A~~ylk~kr~~~AI~vc~kVL~-----~~-P~ypkir 109 (122)
|.+|...|++.+|+..++++++ .+ |+.+.+.
T Consensus 231 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 231 GLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 9999999999999999999999 45 6555544
No 158
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.49 E-value=1.9e-06 Score=63.30 Aligned_cols=72 Identities=11% Similarity=0.116 Sum_probs=41.1
Q ss_pred CCChHHHHHHHH-HHhhCcchHHHHhh-----------C--HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh----ccc
Q psy16144 26 PWRWEPLSAGLR-KKQYISSATNIYNL-----------F--PDDAVVQYTQACRIIGTSDLALHQKLASLLLR----MKR 87 (122)
Q Consensus 26 ~gk~d~A~elL~-~l~~nps~~kA~e~-----------l--y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk----~kr 87 (122)
.|++++|.++++ +++.+ ++.++.. . +++|...|++|.+. +++.+.+.||..|.. .++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~---~~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL---KYAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc---CCccHHHHHHHHHHcCCCcccC
Confidence 566666666666 55554 3333331 1 55666666666655 255666666666666 666
Q ss_pred HHHHHHHHHHHHHhC
Q psy16144 88 YAEAIDVSQTIMKAH 102 (122)
Q Consensus 88 ~~~AI~vc~kVL~~~ 102 (122)
+.+|+..++++++.+
T Consensus 130 ~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 130 FKKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 666666666666554
No 159
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.48 E-value=4.6e-07 Score=66.88 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccH----------HHHHHHHHHHHHhCCCCHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRY----------AEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~----------~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|++|...|++|.++ +|+++.+.+++|.+++..+++ ++||..|+++|+++|+++.+.-
T Consensus 18 feeA~~~~~~Ai~l-~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~ 84 (158)
T 1zu2_A 18 FEQIRQDAENTYKS-NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVW 84 (158)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHH
Confidence 99999999999999 899999999999999999886 5999999999999999997653
No 160
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.46 E-value=3.5e-07 Score=69.13 Aligned_cols=84 Identities=12% Similarity=0.025 Sum_probs=71.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH----HHhhC---------HHHHHHHHHHHHHhhC-----CCChHHHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN----IYNLF---------PDDAVVQYTQACRIIG-----TSDLALHQKLASLL 82 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k----A~e~l---------y~dAa~~ye~Aw~l~~-----~~~~~vgykLA~~y 82 (122)
.+.+.|++++|.++++ +++.+|+++. ++..+ |++|...|++|+++.. +..+.+.+.+|..|
T Consensus 18 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 97 (406)
T 3sf4_A 18 RLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTL 97 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 7888999999999999 9999998753 33322 9999999999998841 34466889999999
Q ss_pred HhcccHHHHHHHHHHHHHhCCCC
Q psy16144 83 LRMKRYAEAIDVSQTIMKAHPSY 105 (122)
Q Consensus 83 lk~kr~~~AI~vc~kVL~~~P~y 105 (122)
...|++.+|+..++++++..|..
T Consensus 98 ~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 98 KVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999988743
No 161
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.46 E-value=5.6e-07 Score=57.48 Aligned_cols=52 Identities=12% Similarity=0.249 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSY 105 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~y 105 (122)
|++|...|+++++. .|+++.+.+.+|.+|...|++.+|+..|+++++.+|++
T Consensus 20 ~~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 20 FDTALKHYDKAKEL-DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc-CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 99999999999999 69999999999999999999999999999999999876
No 162
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.45 E-value=4.5e-06 Score=62.83 Aligned_cols=87 Identities=8% Similarity=0.106 Sum_probs=70.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHH------Hh-----hC----HHHHHHHHHHHHHhhCCCC------hHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNI------YN-----LF----PDDAVVQYTQACRIIGTSD------LALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA------~e-----~l----y~dAa~~ye~Aw~l~~~~~------~~vgykLA 79 (122)
.+...|+|++|.+.++ +++..|..... +. +. |++|..+|++|++.. +.. ..+.+.+|
T Consensus 84 ~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~lg 162 (293)
T 2qfc_A 84 MLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQ-LTGIDVYQNLYIENAIA 162 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTC-CCSSCTTHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCchHHHHHHHHHHH
Confidence 7889999999999999 99887764322 11 11 999999999999874 332 45889999
Q ss_pred HHHHhcccHHHHHHHHHHHH---HhCCCCHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIM---KAHPSYPKVH 109 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL---~~~P~ypkir 109 (122)
.+|...|+|.+|+..+++++ +..|+.+...
T Consensus 163 ~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~ 195 (293)
T 2qfc_A 163 NIYAENGYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcCccccch
Confidence 99999999999999999999 6778766543
No 163
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.43 E-value=5.1e-07 Score=73.41 Aligned_cols=85 Identities=5% Similarity=-0.049 Sum_probs=75.8
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHh------h--C--HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYN------L--F--PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e------~--l--y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~ 90 (122)
++.+.|++++|.++|+ +++..|.+...+. + . +++|...|++|++. .|+++.+...+|..+.+.|++.+
T Consensus 365 ~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~-~p~~~~~~~~~~~~~~~~g~~~~ 443 (530)
T 2ooe_A 365 FARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKK-YGDIPEYVLAYIDYLSHLNEDNN 443 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTTTCHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHH-CCCCHHHHHHHHHHHHhCCCHhh
Confidence 6678899999999999 9999887655443 1 2 89999999999999 59999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHH
Q psy16144 91 AIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 91 AI~vc~kVL~~~P~ypk 107 (122)
|..++++++...|..|.
T Consensus 444 Ar~~~~~al~~~~~~~~ 460 (530)
T 2ooe_A 444 TRVLFERVLTSGSLPPE 460 (530)
T ss_dssp HHHHHHHHHHSCCSCGG
T ss_pred HHHHHHHHHhccCCCHH
Confidence 99999999999998887
No 164
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.42 E-value=4.3e-07 Score=68.50 Aligned_cols=83 Identities=14% Similarity=0.089 Sum_probs=60.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH------HHhh-------C--HHHHHHHHHHHHHhhC------CCChHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN------IYNL-------F--PDDAVVQYTQACRIIG------TSDLALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k------A~e~-------l--y~dAa~~ye~Aw~l~~------~~~~~vgykLA 79 (122)
+|...|++++|.++++ +++..++... ++.. + |++|..+|++|++... +....+.++||
T Consensus 124 ~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg 203 (293)
T 3u3w_A 124 YVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHA 203 (293)
T ss_dssp HHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred HHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 7778888999999998 8886544222 2221 1 8899999999885421 22334678899
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
.+|.+.|+|.+|+..++++++..|.
T Consensus 204 ~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 204 KALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887653
No 165
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.41 E-value=1.5e-06 Score=67.43 Aligned_cols=83 Identities=10% Similarity=-0.013 Sum_probs=69.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcc------hHHHHhhC---------HHHHHHHHHHHHHh----hCCCChHHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISS------ATNIYNLF---------PDDAVVQYTQACRI----IGTSDLALHQKLASL 81 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps------~~kA~e~l---------y~dAa~~ye~Aw~l----~~~~~~~vgykLA~~ 81 (122)
+|...|++++|.++++ +++..+. .+.++..+ |++|..+|++|+++ .+|..+.+.+.||.+
T Consensus 191 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~ 270 (378)
T 3q15_A 191 NYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWT 270 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHH
Confidence 8999999999999999 9987542 12233312 99999999999993 257778899999999
Q ss_pred HHhcccHHHHHHHHHHHHHhCCC
Q psy16144 82 LLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 82 ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
|.+.|++.+|++.++++++..+.
T Consensus 271 ~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 271 LCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998653
No 166
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.41 E-value=2.4e-06 Score=59.11 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=66.7
Q ss_pred HhcCCCChHHHHHHHH-HHhh------Cc-chHHHHhhC---------HHHHHHHHHHHHHhhCCC-ChH----HHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQY------IS-SATNIYNLF---------PDDAVVQYTQACRIIGTS-DLA----LHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~------np-s~~kA~e~l---------y~dAa~~ye~Aw~l~~~~-~~~----vgykLA 79 (122)
+|...|++++|.++++ +++. +| ....++..+ +++|...+++|+++.... ++. +...||
T Consensus 75 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 154 (203)
T 3gw4_A 75 VERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLG 154 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 8889999999999999 9888 33 222333322 999999999999874222 221 247899
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCC--CCHHHHHHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHP--SYPKVHKQIFE 114 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P--~ypkir~~il~ 114 (122)
.+|...|++.+|++.++++++... ..+.....++.
T Consensus 155 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 191 (203)
T 3gw4_A 155 DLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMT 191 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999999988755 33444444443
No 167
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.40 E-value=6.1e-07 Score=65.15 Aligned_cols=50 Identities=8% Similarity=-0.017 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 53 PDDAVVQYTQACRIIGTSD------LALHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~------~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
+++|...|++|+++. +.. ..+.+.||..|.+.|++.+|+..++++++..|
T Consensus 279 ~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 334 (338)
T 3ro2_A 279 YEKAIDYHLKHLAIA-QELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 334 (338)
T ss_dssp HHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHH-HhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 555555555555442 211 22444555555555555555555555554444
No 168
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.38 E-value=1.7e-06 Score=69.28 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=66.8
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEA 91 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~A 91 (122)
+|.+.|++++|.+.++ +++.+|+++++|..+ |++|...|++|.++ +|+++.+...|+..+.+.+++.++
T Consensus 282 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l-~P~~~~~~~~l~~~~~~~~~~~~a 360 (370)
T 1ihg_A 282 CKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI-APEDKAIQAELLKVKQKIKAQKDK 360 (370)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999 999999999999844 99999999999999 799999999999999999999987
Q ss_pred HH
Q psy16144 92 ID 93 (122)
Q Consensus 92 I~ 93 (122)
..
T Consensus 361 ~k 362 (370)
T 1ihg_A 361 EK 362 (370)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 169
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.38 E-value=8.9e-07 Score=61.33 Aligned_cols=82 Identities=13% Similarity=0.110 Sum_probs=66.9
Q ss_pred HhcCCCChHHHHHHHH-HHh------hCcchHHHHhhC---------HHHHHHHHHHHHHhhC--C----CChHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQ------YISSATNIYNLF---------PDDAVVQYTQACRIIG--T----SDLALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~------~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~--~----~~~~vgykLA 79 (122)
+|...|++++|.++++ +++ ..|....++..+ |++|...|++|+++.. + ....+.+.||
T Consensus 35 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg 114 (203)
T 3gw4_A 35 VYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVA 114 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 8889999999999999 998 445555555422 9999999999999831 2 2245688999
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
..|...|++.+|+..++++++..+
T Consensus 115 ~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 115 TVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999997654
No 170
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.38 E-value=7e-07 Score=68.50 Aligned_cols=82 Identities=10% Similarity=0.095 Sum_probs=64.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH------HHhhC---------HHHHHHHHHHHHHhhCCCC------hHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN------IYNLF---------PDDAVVQYTQACRIIGTSD------LALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k------A~e~l---------y~dAa~~ye~Aw~l~~~~~------~~vgykLA 79 (122)
+|...|++++|.++++ +++..|.... ++..+ +++|...|++|.++. +.. ..+.+.||
T Consensus 232 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~la 310 (411)
T 4a1s_A 232 TYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA-VELGEREVEAQSCYSLG 310 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 8888899999999999 8888776543 33322 889999999998884 433 56788889
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
..|.+.|++.+|+..++++++..|+
T Consensus 311 ~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 311 NTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887664
No 171
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.37 E-value=2.3e-06 Score=56.70 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHhh------CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 53 PDDAVVQYTQACRII------GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~------~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
|..|+.-|+.|++.. ++..+.+...||++|.+.|++.+|+..++++++.+|+++.+..
T Consensus 21 y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 21 YYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 667777777776653 3567889999999999999999999999999999999998844
No 172
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.37 E-value=2.5e-06 Score=70.84 Aligned_cols=89 Identities=9% Similarity=-0.059 Sum_probs=71.6
Q ss_pred HhcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHh----hCCCChHHH---H
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRI----IGTSDLALH---Q 76 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l----~~~~~~~vg---y 76 (122)
-.-..|+|++|+++++ +|+. +|+-...+.-+ |++|...|++|++. -+|++|.++ +
T Consensus 307 ~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 386 (433)
T 3qww_A 307 RAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWL 386 (433)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred HhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 3346789999999999 9875 34434444322 99999999999854 368888886 5
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHHh-----CCCCHHHHH
Q psy16144 77 KLASLLLRMKRYAEAIDVSQTIMKA-----HPSYPKVHK 110 (122)
Q Consensus 77 kLA~~ylk~kr~~~AI~vc~kVL~~-----~P~ypkir~ 110 (122)
+||..|...|+|++|+..++++|++ -|++|.++.
T Consensus 387 nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 387 KLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 8999999999999999999999986 589998875
No 173
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.35 E-value=1.2e-06 Score=66.06 Aligned_cols=82 Identities=9% Similarity=0.009 Sum_probs=63.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHhhC---------HHHHHHHHHHHHHhhCCCC------hHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYNLF---------PDDAVVQYTQACRIIGTSD------LALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e~l---------y~dAa~~ye~Aw~l~~~~~------~~vgykLA 79 (122)
+|...|++++|.++++ +++..|.. ..++..+ +++|...|++|+++. +.. +.+.+.||
T Consensus 236 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~la 314 (406)
T 3sf4_A 236 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA-QELNDRIGEGRACWSLG 314 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH-HhcCCcHHHHHHHHHHH
Confidence 7888899999999998 88877765 3343322 889999999998884 333 56788889
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
..|.+.|++.+|+..++++++..+.
T Consensus 315 ~~~~~~g~~~~A~~~~~~al~~~~~ 339 (406)
T 3sf4_A 315 NAYTALGNHDQAMHFAEKHLEISRE 339 (406)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887553
No 174
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.34 E-value=7.7e-06 Score=60.03 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=46.4
Q ss_pred HhcC----CCChHHHHHHHH-HHhhCcchHHHHh-------h----C--HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 22 LYLL----PWRWEPLSAGLR-KKQYISSATNIYN-------L----F--PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 22 Lyi~----~gk~d~A~elL~-~l~~nps~~kA~e-------~----l--y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
+|.+ .|++++|.++++ +++.++. .++. . . +++|...|++|.+. .++.+.+.||..|.
T Consensus 119 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~--~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~---~~~~a~~~lg~~~~ 193 (273)
T 1ouv_A 119 IYHDGKVVTRDFKKAVEYFTKACDLNDG--DGCTILGSLYDAGRGTPKDLKKALASYDKACDL---KDSPGCFNAGNMYH 193 (273)
T ss_dssp HHHHCSSSCCCHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHH
T ss_pred HHHcCCCcccCHHHHHHHHHHHHhcCcH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC---CCHHHHHHHHHHHH
Confidence 5555 666666666666 6665532 2222 1 2 66666666666665 24566666666666
Q ss_pred h----cccHHHHHHHHHHHHHhCC
Q psy16144 84 R----MKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 84 k----~kr~~~AI~vc~kVL~~~P 103 (122)
. .+++.+|+..++++++.+|
T Consensus 194 ~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 194 HGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp HTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred cCCCCCccHHHHHHHHHHHHhCCC
Confidence 6 6666666666666666655
No 175
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.30 E-value=3.3e-06 Score=65.45 Aligned_cols=88 Identities=14% Similarity=-0.034 Sum_probs=70.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch-------HHHHhhC---------HHHHHHHHHHHHHhhCCC-----ChHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA-------TNIYNLF---------PDDAVVQYTQACRIIGTS-----DLALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~-------~kA~e~l---------y~dAa~~ye~Aw~l~~~~-----~~~vgykLA 79 (122)
+|...|++++|.++++ +++..+.. +.++..+ |++|..+|++|+++.... ...+.+.||
T Consensus 150 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg 229 (378)
T 3q15_A 150 AYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIA 229 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 8899999999999999 99876542 2233222 999999999999985221 235778999
Q ss_pred HHHHhcccHHHHHHHHHHHHH-----hCCCCHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMK-----AHPSYPKVH 109 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~-----~~P~ypkir 109 (122)
.+|...|++.+|++.++++++ .+|..+.+.
T Consensus 230 ~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 264 (378)
T 3q15_A 230 NSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVL 264 (378)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHH
Confidence 999999999999999999999 777665554
No 176
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.28 E-value=3e-06 Score=63.79 Aligned_cols=85 Identities=11% Similarity=-0.055 Sum_probs=66.7
Q ss_pred HHHH--HhcCCCChHHHHHHHH-HHhhC-------cchHHHHhhC---------HHHHHHHHHHHHHhhCCCC------h
Q psy16144 18 WHFL--LYLLPWRWEPLSAGLR-KKQYI-------SSATNIYNLF---------PDDAVVQYTQACRIIGTSD------L 72 (122)
Q Consensus 18 ~~~L--Lyi~~gk~d~A~elL~-~l~~n-------ps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~------~ 72 (122)
++.+ +|...|++++|.++++ +++.. +....++.-+ |++|..+|++|.++. +.. +
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~-~~~~~~~~~~ 236 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS-CRINSMALIG 236 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTBCTTHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHcCcHHHHH
Confidence 4445 8999999999999999 99532 2222233311 999999999999985 333 6
Q ss_pred HHHHHHHHHHHhccc-HHHHHHHHHHHHHhCC
Q psy16144 73 ALHQKLASLLLRMKR-YAEAIDVSQTIMKAHP 103 (122)
Q Consensus 73 ~vgykLA~~ylk~kr-~~~AI~vc~kVL~~~P 103 (122)
.+.+.+|.+|.+.|+ +++|++.|++++....
T Consensus 237 ~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 237 QLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 789999999999995 7999999999997643
No 177
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.28 E-value=4.2e-06 Score=60.85 Aligned_cols=53 Identities=9% Similarity=-0.014 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhhCC--CChHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCCCHH
Q psy16144 53 PDDAVVQYTQACRIIGT--SDLALHQKLASLLLR----MKRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~--~~~~vgykLA~~ylk----~kr~~~AI~vc~kVL~~~P~ypk 107 (122)
+++|...|++|.+. ++ +++.+.+.||..|.. .+++.+|+..++++++. |.+|.
T Consensus 105 ~~~A~~~~~~A~~~-~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~ 163 (212)
T 3rjv_A 105 VAHAITLLQDAARD-SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGY 163 (212)
T ss_dssp HHHHHHHHHHHTSS-TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTH
T ss_pred HHHHHHHHHHHHHc-CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHH
Confidence 56666666666655 23 235666666666666 55666666666666655 33433
No 178
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.25 E-value=8.2e-06 Score=67.27 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=75.1
Q ss_pred hcCCCChHHHHHHHH-HHhh--------CcchHHHHhhC---------HHHHHHHHHHHHHh----hCCCChHHH---HH
Q psy16144 23 YLLPWRWEPLSAGLR-KKQY--------ISSATNIYNLF---------PDDAVVQYTQACRI----IGTSDLALH---QK 77 (122)
Q Consensus 23 yi~~gk~d~A~elL~-~l~~--------nps~~kA~e~l---------y~dAa~~ye~Aw~l----~~~~~~~vg---yk 77 (122)
+-++|+|++|+++++ +|+. +|+-...+.-+ |++|...|+++++. -+|++|.+| ++
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~n 376 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMK 376 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHH
Confidence 346799999999999 9865 33333333311 99999999999854 368889886 58
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHh-----CCCCHHHHH--HHHHHHHhcc
Q psy16144 78 LASLLLRMKRYAEAIDVSQTIMKA-----HPSYPKVHK--QIFEKAMVHL 120 (122)
Q Consensus 78 LA~~ylk~kr~~~AI~vc~kVL~~-----~P~ypkir~--~il~ka~~~l 120 (122)
||..|...|++++|+..++++|++ -|++|.++. .-|.-|+..+
T Consensus 377 La~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 377 VGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999975 689998874 2255555444
No 179
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.22 E-value=1.2e-05 Score=58.35 Aligned_cols=80 Identities=8% Similarity=-0.085 Sum_probs=69.1
Q ss_pred HhcC----CCChHHHHHHHH-HHhhCcc--hHHHHhhC-------------HHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q psy16144 22 LYLL----PWRWEPLSAGLR-KKQYISS--ATNIYNLF-------------PDDAVVQYTQACRIIGTSDLALHQKLASL 81 (122)
Q Consensus 22 Lyi~----~gk~d~A~elL~-~l~~nps--~~kA~e~l-------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ 81 (122)
+|.. .+++++|.++++ +++.+|+ .+.++..+ +++|...|++|.+. +.++.+.+.||..
T Consensus 94 ~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~--~~~~~a~~~Lg~~ 171 (212)
T 3rjv_A 94 VLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL--SRTGYAEYWAGMM 171 (212)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT--SCTTHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc--CCCHHHHHHHHHH
Confidence 7777 899999999999 9999984 46666633 89999999999998 5678899999999
Q ss_pred HHhcc------cHHHHHHHHHHHHHhCC
Q psy16144 82 LLRMK------RYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 82 ylk~k------r~~~AI~vc~kVL~~~P 103 (122)
|.+.. ++.+|+..++++.+..+
T Consensus 172 y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 172 FQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 99763 89999999999998865
No 180
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.22 E-value=4.9e-06 Score=70.66 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=80.3
Q ss_pred HhcCCC--ChHHHHHHHH-HHhhCcchHHHHhhC----------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc---
Q psy16144 22 LYLLPW--RWEPLSAGLR-KKQYISSATNIYNLF----------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM--- 85 (122)
Q Consensus 22 Lyi~~g--k~d~A~elL~-~l~~nps~~kA~e~l----------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~--- 85 (122)
+.-+.| ++++|.+.+. +++.+|.+..||.+. +++|..+++++++. +|+|.++.+..++.+.+.
T Consensus 116 ~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~-~p~n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 116 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR-NFSNYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp HHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT-TCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHH-CCCCccHHHHHHHHHHhhccc
Confidence 666778 6699999999 999999999999854 89999999999999 899999999999999985
Q ss_pred -----------ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 -----------KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 -----------kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
+++.+|++.+++++..+|+++.++.
T Consensus 195 ~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~ 230 (567)
T 1dce_A 195 PDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 230 (567)
T ss_dssp CCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHhhCCCCccHHH
Confidence 7899999999999999999988864
No 181
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.20 E-value=3.6e-06 Score=54.47 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=40.0
Q ss_pred CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 68 GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 68 ~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|+++.+.+.||.+|.+.|++.+|+..++++++.+|+++.++..
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 46 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYH 46 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 69999999999999999999999999999999999999988653
No 182
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.18 E-value=2.7e-05 Score=61.88 Aligned_cols=87 Identities=9% Similarity=-0.044 Sum_probs=77.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC-----------HHHHHHHHHHHHHhhCCCChHHHHHHHHHH----Hhc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF-----------PDDAVVQYTQACRIIGTSDLALHQKLASLL----LRM 85 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l-----------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~y----lk~ 85 (122)
+.-.....++|.++.. +|..||++.-+|.+. +++|...++.++.. +|++.++.+--+..+ .+.
T Consensus 42 ~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~-nPk~y~aW~~R~~iL~~~~~~l 120 (306)
T 3dra_A 42 LMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD-NEKNYQIWNYRQLIIGQIMELN 120 (306)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH-CcccHHHHHHHHHHHHHHHHhc
Confidence 4445555679999999 999999999999832 89999999999999 899999999999999 666
Q ss_pred ---ccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 86 ---KRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 86 ---kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
+++.+++++|.++|+.+|.+..++
T Consensus 121 ~~~~~~~~EL~~~~~~l~~~pkny~aW 147 (306)
T 3dra_A 121 NNDFDPYREFDILEAMLSSDPKNHHVW 147 (306)
T ss_dssp TTCCCTHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 889999999999999999998884
No 183
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.17 E-value=2.4e-05 Score=63.21 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=79.1
Q ss_pred HhcCCC--ChHHHHHHHH-HHhhCcchHHHHhhC----------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc---
Q psy16144 22 LYLLPW--RWEPLSAGLR-KKQYISSATNIYNLF----------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM--- 85 (122)
Q Consensus 22 Lyi~~g--k~d~A~elL~-~l~~nps~~kA~e~l----------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~--- 85 (122)
+.-+.| .++++.+.+. +++.+|.+.-||.+. ++++..++.++++. +|+|.++....++.+.+.
T Consensus 117 lL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~-~p~N~SAW~~R~~ll~~l~~~ 195 (331)
T 3dss_A 117 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR-NFSNYSSWHYRSCLLPQLHPQ 195 (331)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CSCCHHHHHHHHHHHHHHSCC
T ss_pred HHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHhhhc
Confidence 444455 4899999999 999999999999844 68999999999999 899999999999999988
Q ss_pred -----------ccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 86 -----------KRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 86 -----------kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
+++.++++.+.+++..+|++..++.
T Consensus 196 ~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 196 PDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp C------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred cccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 7899999999999999999999885
No 184
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.11 E-value=3.6e-05 Score=65.33 Aligned_cols=84 Identities=10% Similarity=0.022 Sum_probs=65.3
Q ss_pred CCCChHHHHHHHH-HHhhCcchHHHHhhC-------------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 25 LPWRWEPLSAGLR-KKQYISSATNIYNLF-------------------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 25 ~~gk~d~A~elL~-~l~~nps~~kA~e~l-------------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
.....++|.+... +++.||++..+|.+. |++|...|+++.+. +|++..+.+--+.++.+
T Consensus 41 ~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~-~pK~y~aW~hR~w~l~~ 119 (567)
T 1dce_A 41 AGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV-NPKSYGTWHHRCWLLSR 119 (567)
T ss_dssp TTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 3334567788888 888888888888732 67788888888888 78888888888888888
Q ss_pred cc--cHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 85 MK--RYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 85 ~k--r~~~AI~vc~kVL~~~P~ypkir 109 (122)
.+ ++.+|++.|.++++.+|.+..++
T Consensus 120 l~~~~~~~el~~~~k~l~~d~~N~~aW 146 (567)
T 1dce_A 120 LPEPNWARELELCARFLEADERNFHCW 146 (567)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccccHHHHHHHHHHHHhhccccccHH
Confidence 88 56888888888888888777665
No 185
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.10 E-value=1.9e-05 Score=58.04 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhhCC-CChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGT-SDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~-~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
+++++..++...+...| ++....|.||..|.|.|+|.+|...|+++|+.+|+++.++.
T Consensus 51 ~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 51 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 78999999999998436 67899999999999999999999999999999999987753
No 186
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.06 E-value=6.3e-05 Score=60.75 Aligned_cols=86 Identities=8% Similarity=0.037 Sum_probs=69.5
Q ss_pred hcCCCChH-HHHHHHH-HHhhCcchHHHHhhC-------------------HHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q psy16144 23 YLLPWRWE-PLSAGLR-KKQYISSATNIYNLF-------------------PDDAVVQYTQACRIIGTSDLALHQKLASL 81 (122)
Q Consensus 23 yi~~gk~d-~A~elL~-~l~~nps~~kA~e~l-------------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ 81 (122)
..+.|.++ +|.++.. ++..||++.-+|.+- ++++...++.++.. +|.++.+.+--+.+
T Consensus 39 ~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~-~PKny~aW~hR~wl 117 (331)
T 3dss_A 39 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV-NPKSYGTWHHRCWL 117 (331)
T ss_dssp HHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-CTTCHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHH
Confidence 34566665 7888888 899999988888843 35788888888888 78888888888888
Q ss_pred HHhccc--HHHHHHHHHHHHHhCCCCHHHH
Q psy16144 82 LLRMKR--YAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 82 ylk~kr--~~~AI~vc~kVL~~~P~ypkir 109 (122)
+.+.++ +.+++++|.++|+.+|.+.-++
T Consensus 118 L~~l~~~~~~~EL~~~~k~l~~dprNy~AW 147 (331)
T 3dss_A 118 LSRLPEPNWARELELCARFLEADERNFHCW 147 (331)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhccCcccHHHHHHHHHHHHHhCCCCHHHH
Confidence 888884 7888888999998888887774
No 187
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.06 E-value=3.2e-05 Score=63.03 Aligned_cols=87 Identities=8% Similarity=-0.016 Sum_probs=79.7
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC----------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc-c-cH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF----------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM-K-RY 88 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l----------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~-k-r~ 88 (122)
+....+..++|.+++. +|..||++.-+|.+. ++++...++.++.. +|++..+.+--+.++.+. + ++
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~-nPKny~aW~hR~wlL~~l~~~~~ 141 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ-NLKSYQVWHHRLLLLDRISPQDP 141 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT-TCCCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHhcCCCh
Confidence 5556677889999999 999999999999943 99999999999999 899999999999999998 8 99
Q ss_pred HHHHHHHHHHHHhCCCCHHHH
Q psy16144 89 AEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 89 ~~AI~vc~kVL~~~P~ypkir 109 (122)
.++++.|.++|+.+|.+.-++
T Consensus 142 ~~EL~~~~k~L~~dpkNy~AW 162 (349)
T 3q7a_A 142 VSEIEYIHGSLLPDPKNYHTW 162 (349)
T ss_dssp HHHHHHHHHHTSSCTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999998875
No 188
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.03 E-value=1.5e-05 Score=60.82 Aligned_cols=83 Identities=18% Similarity=0.060 Sum_probs=45.8
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHh-----------hC----HHHHHHHHHHHHHhhC-------CCChHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYN-----------LF----PDDAVVQYTQACRIIG-------TSDLALHQKL 78 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e-----------~l----y~dAa~~ye~Aw~l~~-------~~~~~vgykL 78 (122)
+|...|++++|.+.++ +++..|.....+. +. |++|...|+++.++.. |....+...|
T Consensus 62 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 141 (373)
T 1hz4_A 62 VLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIR 141 (373)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHH
Confidence 5555566666666666 6665554322111 11 6666666666666531 1122344456
Q ss_pred HHHHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 79 ASLLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 79 A~~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
|..|...|++++|++.++++++..|.
T Consensus 142 a~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 142 AQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 66666666666666666666666654
No 189
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.03 E-value=3.3e-06 Score=67.19 Aligned_cols=80 Identities=10% Similarity=-0.142 Sum_probs=66.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhh-----C----HHHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHhcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNL-----F----PDDAVVQYTQACRIIGTSD-LALHQKLASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~-----l----y~dAa~~ye~Aw~l~~~~~-~~vgykLA~~ylk~kr~~~ 90 (122)
++++.|+|++|.++|. ++..+|+.. +..- + |.+|...|+.+.....|.. ..+.|.||..+...|++.+
T Consensus 111 ~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~e 189 (282)
T 4f3v_A 111 CEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTE 189 (282)
T ss_dssp HHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHH
Confidence 8889999999999999 999999876 4431 1 9999999998876632211 3589999999999999999
Q ss_pred HHHHHHHHHHhC
Q psy16144 91 AIDVSQTIMKAH 102 (122)
Q Consensus 91 AI~vc~kVL~~~ 102 (122)
|++.+++++...
T Consensus 190 Al~~l~~a~~g~ 201 (282)
T 4f3v_A 190 AERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHTST
T ss_pred HHHHHHHHhcCC
Confidence 999999999544
No 190
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.96 E-value=6.7e-05 Score=59.54 Aligned_cols=82 Identities=9% Similarity=0.020 Sum_probs=76.5
Q ss_pred CChHHHHHHHH-HHhhCcchHHHHhhC---------HH--HHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc------H
Q psy16144 27 WRWEPLSAGLR-KKQYISSATNIYNLF---------PD--DAVVQYTQACRIIGTSDLALHQKLASLLLRMKR------Y 88 (122)
Q Consensus 27 gk~d~A~elL~-~l~~nps~~kA~e~l---------y~--dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr------~ 88 (122)
++++++.+.+. +++.+|.+.-+|.+. ++ ++...++++++. +|+|..+...-++++.+.++ +
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~-d~~N~sAW~~R~~ll~~l~~~~~~~~~ 202 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT-DLKNNSAWSHRFFLLFSKKHLATDNTI 202 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHSSGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHhccccchhhhH
Confidence 78999999999 999999999999844 67 999999999999 89999999999999999998 9
Q ss_pred HHHHHHHHHHHHhCCCCHHHH
Q psy16144 89 AEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 89 ~~AI~vc~kVL~~~P~ypkir 109 (122)
.++++.+.+.+..+|++..++
T Consensus 203 ~eEl~~~~~aI~~~p~n~SaW 223 (306)
T 3dra_A 203 DEELNYVKDKIVKCPQNPSTW 223 (306)
T ss_dssp HHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHHHHhCCCCccHH
Confidence 999999999999999999886
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.87 E-value=0.00012 Score=55.76 Aligned_cols=82 Identities=10% Similarity=-0.019 Sum_probs=65.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCc--------chHHHHhhC---------HHHHHHHHHHHHHhhCCC----ChHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYIS--------SATNIYNLF---------PDDAVVQYTQACRIIGTS----DLALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~np--------s~~kA~e~l---------y~dAa~~ye~Aw~l~~~~----~~~vgykLA 79 (122)
++...|++++|.++++ +++..+ ....++..+ +++|...|+++++..... ...+.+.||
T Consensus 102 ~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la 181 (373)
T 1hz4_A 102 ILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLI 181 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHH
Confidence 8889999999999999 988763 333333311 999999999999995322 235678899
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
..+...|++.+|++.+++++...+
T Consensus 182 ~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 182 QCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999998743
No 192
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.84 E-value=0.0001 Score=59.27 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=58.5
Q ss_pred HhcCCC---ChHHHHHHHH-HHhhCcchHHHHhhC-------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh
Q psy16144 22 LYLLPW---RWEPLSAGLR-KKQYISSATNIYNLF-------------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR 84 (122)
Q Consensus 22 Lyi~~g---k~d~A~elL~-~l~~nps~~kA~e~l-------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk 84 (122)
+|.+.| ++++|.++++ +++. +++.++..+ +++|...|++|.+. .++.+.+.||..|.+
T Consensus 337 ~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~---~~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 337 IYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ---GLSAAQVQLGEIYYY 411 (490)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHH
T ss_pred HHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC---CCHHHHHHHHHHHHc
Confidence 555445 6788888888 7765 345555422 77888888888876 258888888888888
Q ss_pred ----cccHHHHHHHHHHHHHhCCC
Q psy16144 85 ----MKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 85 ----~kr~~~AI~vc~kVL~~~P~ 104 (122)
.+++++|+..|+++++..|+
T Consensus 412 g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 412 GLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp TSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCC
Confidence 78888888888888888854
No 193
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.81 E-value=4.9e-05 Score=61.45 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=68.5
Q ss_pred hHHHHHHHH-HHhhCcc--hHHHHhhC--------------HHHHHHHHHHHHHhhCCC-ChHHHHHHHHHHHhc-ccHH
Q psy16144 29 WEPLSAGLR-KKQYISS--ATNIYNLF--------------PDDAVVQYTQACRIIGTS-DLALHQKLASLLLRM-KRYA 89 (122)
Q Consensus 29 ~d~A~elL~-~l~~nps--~~kA~e~l--------------y~dAa~~ye~Aw~l~~~~-~~~vgykLA~~ylk~-kr~~ 89 (122)
...|...++ +++.+|+ ...||..+ .+.|..+|++|+++ +|+ ++.+-+-.|..|... |++.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L-nP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY-CSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH-CCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh-CCCCCchHHHHHHHHHHHhcCCHH
Confidence 367889999 9999999 67788844 88999999999999 686 599999999999995 9999
Q ss_pred HHHHHHHHHHHhCCCC-HH
Q psy16144 90 EAIDVSQTIMKAHPSY-PK 107 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~y-pk 107 (122)
+|...+++||+..|.. |.
T Consensus 258 ~a~~~L~kAL~a~p~~~P~ 276 (301)
T 3u64_A 258 GFDEALDRALAIDPESVPH 276 (301)
T ss_dssp HHHHHHHHHHHCCGGGCSS
T ss_pred HHHHHHHHHHcCCCCCCCC
Confidence 9999999999988864 44
No 194
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.78 E-value=9.9e-05 Score=60.15 Aligned_cols=81 Identities=4% Similarity=-0.130 Sum_probs=64.6
Q ss_pred ChHHHHHHHH-HHhhCcchHHHHhhC---------HH--------HHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc--
Q psy16144 28 RWEPLSAGLR-KKQYISSATNIYNLF---------PD--------DAVVQYTQACRIIGTSDLALHQKLASLLLRMKR-- 87 (122)
Q Consensus 28 k~d~A~elL~-~l~~nps~~kA~e~l---------y~--------dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr-- 87 (122)
+++++.+++. +++.+|.+.-||.+. ++ ++...++++++. +|+|.++....++++.+.++
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~-dp~N~SAW~~R~~lL~~l~~~~ 218 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV-DGRNNSAWGWRWYLRVSRPGAE 218 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHTTSTTCC
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHhccccc
Confidence 6777777777 777777777777743 44 788888888888 78888888888888888876
Q ss_pred -----HHHHHHHHHHHHHhCCCCHHHH
Q psy16144 88 -----YAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 88 -----~~~AI~vc~kVL~~~P~ypkir 109 (122)
+.++++.+.+.+..+|++.-++
T Consensus 219 ~~~~~~~eELe~~~~aI~~~P~n~SaW 245 (349)
T 3q7a_A 219 TSSRSLQDELIYILKSIHLIPHNVSAW 245 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 6788888888888888888776
No 195
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.73 E-value=7.2e-05 Score=49.38 Aligned_cols=52 Identities=17% Similarity=0.125 Sum_probs=43.8
Q ss_pred HhcCCCC--hHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHH
Q psy16144 22 LYLLPWR--WEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLAL 74 (122)
Q Consensus 22 Lyi~~gk--~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~v 74 (122)
+|.+.|. .++|..+|+ +|+.+|+|++|+.++ |++|+..|+++++. +|.+|..
T Consensus 16 l~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~-~p~~~~~ 79 (93)
T 3bee_A 16 LYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS-NDPNLDR 79 (93)
T ss_dssp HHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC-CCTTCCH
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCCccH
Confidence 4444444 899999999 999999999999866 99999999999999 5666654
No 196
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.68 E-value=8.4e-05 Score=59.80 Aligned_cols=86 Identities=15% Similarity=0.097 Sum_probs=67.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCc------chH-----HHHhhC------HHHHHHHHHHHHHhhCCC--ChHHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYIS------SAT-----NIYNLF------PDDAVVQYTQACRIIGTS--DLALHQKLASL 81 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~np------s~~-----kA~e~l------y~dAa~~ye~Aw~l~~~~--~~~vgykLA~~ 81 (122)
+|++.|+.|.|.+.|+ ..+.+| +.. .+|-.+ +.+|...|+.+.+. .|+ ++...++ +
T Consensus 145 i~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~-~p~~~~~~lLln---~ 220 (310)
T 3mv2_B 145 VALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT-FPTWKTQLGLLN---L 220 (310)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT-SCSHHHHHHHHH---H
T ss_pred HHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh-CCCcccHHHHHH---H
Confidence 9999999999999999 999998 222 233333 99999999998665 354 2344444 8
Q ss_pred HHhcccHHHHHHHHHHHHHhC----------CCCHHHHHH
Q psy16144 82 LLRMKRYAEAIDVSQTIMKAH----------PSYPKVHKQ 111 (122)
Q Consensus 82 ylk~kr~~~AI~vc~kVL~~~----------P~ypkir~~ 111 (122)
+++.|++.+|....+++++.+ |++|..-..
T Consensus 221 ~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN 260 (310)
T 3mv2_B 221 HLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLAN 260 (310)
T ss_dssp HHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHH
Confidence 999999999999999998874 778877633
No 197
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.66 E-value=0.00024 Score=57.49 Aligned_cols=75 Identities=9% Similarity=-0.027 Sum_probs=45.5
Q ss_pred HhcCCC---ChHHHHHHHH-HHhhCcchHHHHhhC-------------HHHHHHHHHHHHHhhCCCChHHHHHHHHH-H-
Q psy16144 22 LYLLPW---RWEPLSAGLR-KKQYISSATNIYNLF-------------PDDAVVQYTQACRIIGTSDLALHQKLASL-L- 82 (122)
Q Consensus 22 Lyi~~g---k~d~A~elL~-~l~~nps~~kA~e~l-------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~-y- 82 (122)
+|.+.| ++++|.+.++ +.+.+|..+.++..+ +++|...|++|. |.++.+.+.||.. |
T Consensus 185 ~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa----~g~~~a~~~Lg~~~~~ 260 (452)
T 3e4b_A 185 VYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA----PGYPASWVSLAQLLYD 260 (452)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG----GGSTHHHHHHHHHHHH
T ss_pred HHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc----CCCHHHHHHHHHHHHh
Confidence 555566 6666666666 666666655543211 566666666665 5566666666666 3
Q ss_pred -HhcccHHHHHHHHHHHHH
Q psy16144 83 -LRMKRYAEAIDVSQTIMK 100 (122)
Q Consensus 83 -lk~kr~~~AI~vc~kVL~ 100 (122)
...+++.+|+..++++.+
T Consensus 261 ~~~~~d~~~A~~~~~~Aa~ 279 (452)
T 3e4b_A 261 FPELGDVEQMMKYLDNGRA 279 (452)
T ss_dssp SGGGCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 355666666666666654
No 198
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.66 E-value=0.00032 Score=58.93 Aligned_cols=88 Identities=9% Similarity=-0.039 Sum_probs=67.7
Q ss_pred HHHHHHH--HhcCCCChHHHHHHHH-HHhhC--------cchHHHHhhC---------HHHHHHHHHHHHHhh----CCC
Q psy16144 15 IAEWHFL--LYLLPWRWEPLSAGLR-KKQYI--------SSATNIYNLF---------PDDAVVQYTQACRII----GTS 70 (122)
Q Consensus 15 ~~~~~~L--Lyi~~gk~d~A~elL~-~l~~n--------ps~~kA~e~l---------y~dAa~~ye~Aw~l~----~~~ 70 (122)
..-++.| +|..+|+|++|+++++ +|+.- |+-...+.-+ |++|...|++|++.. +|+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344555 8899999999999999 88753 2222222211 999999999998642 788
Q ss_pred ChHHHH---HHHHHHHhcccHHHHHHHHHHHHHhC
Q psy16144 71 DLALHQ---KLASLLLRMKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 71 ~~~vgy---kLA~~ylk~kr~~~AI~vc~kVL~~~ 102 (122)
+|.+.- .|+.+++..++|.+|+.+|+++.+..
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888764 89999999999999999999876543
No 199
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.65 E-value=0.00057 Score=46.83 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=63.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC-------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh---
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF-------------PDDAVVQYTQACRIIGTSDLALHQKLASLLLR--- 84 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l-------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk--- 84 (122)
+|.+.+.+++|.++++ +.+. +++.|+..+ +++|...|++|.+. .++.+.+.||..|..
T Consensus 34 ~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~---g~~~a~~~Lg~~y~~G~g 108 (138)
T 1klx_A 34 VSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL---NDQDGCLILGYKQYAGKG 108 (138)
T ss_dssp HTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHTSS
T ss_pred HHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC---CCHHHHHHHHHHHHCCCC
Confidence 7778788899999999 7765 445555522 88999999999887 478999999999999
Q ss_pred -cccHHHHHHHHHHHHHhC
Q psy16144 85 -MKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 85 -~kr~~~AI~vc~kVL~~~ 102 (122)
.+++.+|+..++++.+..
T Consensus 109 ~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 109 VVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SCCCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHCC
Confidence 899999999999998874
No 200
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.57 E-value=0.00043 Score=57.16 Aligned_cols=53 Identities=15% Similarity=0.055 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPK 107 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypk 107 (122)
+++|...+++|..+ +|+ .....-||..+.-.|++++|++.+.+++..+|..|.
T Consensus 293 ~d~A~~~l~rAl~L-n~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 293 TDESYQAINTGIDL-EMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHHH-CCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHHHhc-CCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 78889999999999 654 555678899999999999999999999999996653
No 201
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.56 E-value=0.00045 Score=55.89 Aligned_cols=76 Identities=7% Similarity=-0.132 Sum_probs=58.7
Q ss_pred CChHHHHHHHH-HHhhCcchHHHHhhC------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc----ccHH
Q psy16144 27 WRWEPLSAGLR-KKQYISSATNIYNLF------------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM----KRYA 89 (122)
Q Consensus 27 gk~d~A~elL~-~l~~nps~~kA~e~l------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~----kr~~ 89 (122)
+++++|.++++ +. |+++.++..+ +++|...|++|.+. .++.+.+.||..|... +++.
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~---g~~~A~~~Lg~~y~~G~g~~~d~~ 304 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA---DQPRAELLLGKLYYEGKWVPADAK 304 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHCSSSCCCHH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC---CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 68889999998 76 6777776622 78888899888866 3788888899888843 2888
Q ss_pred HHHHHHHHHHHhCCCCHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~ 111 (122)
+|+..++++. |++|.....
T Consensus 305 ~A~~~~~~Aa---~g~~~A~~~ 323 (452)
T 3e4b_A 305 AAEAHFEKAV---GREVAADYY 323 (452)
T ss_dssp HHHHHHHTTT---TTCHHHHHH
T ss_pred HHHHHHHHHh---CCCHHHHHH
Confidence 8888888888 777776543
No 202
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.00033 Score=54.00 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=60.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHh-----------hC----HHHHHHHHHHHHHhhCCCC-----hHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYN-----------LF----PDDAVVQYTQACRIIGTSD-----LALHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e-----------~l----y~dAa~~ye~Aw~l~~~~~-----~~vgykLA~ 80 (122)
+|.+.|++++|.++++ +++..++..++.. +. ++.|...|+++........ ..+..+||.
T Consensus 64 ~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 143 (434)
T 4b4t_Q 64 LYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLAT 143 (434)
T ss_dssp HHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 8888899999999999 8887776555432 11 8888888888877642221 456778888
Q ss_pred HHHhcccHHHHHHHHHHHHHh
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~ 101 (122)
.|...|+|.+|+.++++++..
T Consensus 144 ~~~~~g~~~~A~~~l~~~~~~ 164 (434)
T 4b4t_Q 144 LHYQKKQYKDSLALINDLLRE 164 (434)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHccChHHHHHHHHHHHHH
Confidence 888888888888888888765
No 203
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.45 E-value=0.0016 Score=52.22 Aligned_cols=76 Identities=16% Similarity=0.031 Sum_probs=55.1
Q ss_pred HhcCC-----CChHHHHHHHH-HHhhCcchHHHHhhC------------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy16144 22 LYLLP-----WRWEPLSAGLR-KKQYISSATNIYNLF------------PDDAVVQYTQACRIIGTSDLALHQKLASLLL 83 (122)
Q Consensus 22 Lyi~~-----gk~d~A~elL~-~l~~nps~~kA~e~l------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~yl 83 (122)
+|... +++++|.+.++ +++.++ +.++..+ +++|...|++|.+. .++.+.+.||..|.
T Consensus 300 ~y~~~~~g~~~~~~~A~~~~~~a~~~~~--~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~---~~~~a~~~Lg~~y~ 374 (490)
T 2xm6_A 300 LYDKGAEGVAKNREQAISWYTKSAEQGD--ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK---GEKAAQFNLGNALL 374 (490)
T ss_dssp HHHHCBTTBCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHH
T ss_pred HHHcCCCCCcCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC---CCHHHHHHHHHHHH
Confidence 55554 77888888888 776543 3444322 67788888888876 36888888888888
Q ss_pred h----cccHHHHHHHHHHHHHhC
Q psy16144 84 R----MKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 84 k----~kr~~~AI~vc~kVL~~~ 102 (122)
. .+++.+|+..++++++..
T Consensus 375 ~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 375 QGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HTSSSCCCHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHHHHhCC
Confidence 8 788888888888887754
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.36 E-value=0.0018 Score=44.25 Aligned_cols=78 Identities=6% Similarity=-0.135 Sum_probs=62.0
Q ss_pred CChHHHHHHHH-HHhhCcchH-HHHhhC----HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHh----cccHHHHHHHHH
Q psy16144 27 WRWEPLSAGLR-KKQYISSAT-NIYNLF----PDDAVVQYTQACRIIGTSDLALHQKLASLLLR----MKRYAEAIDVSQ 96 (122)
Q Consensus 27 gk~d~A~elL~-~l~~nps~~-kA~e~l----y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk----~kr~~~AI~vc~ 96 (122)
+++++|.++++ +.+.+...+ .+.-|. +++|...|++|.+. .++.+.+.||..|.. .+++.+|+..++
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~lg~~y~~g~~~~~A~~~~~~Aa~~---g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~ 85 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKLFQYLSKACEL---NSGNGCRFLGDFYENGKYVKKDLRKAAQYYS 85 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHTCTTSCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhhHHHHHHcCCCHHHHHHHHHHHHcC---CCHHHHHHHHHHHHcCCCCCccHHHHHHHHH
Confidence 46899999999 777654322 222233 78899999999987 479999999999999 899999999999
Q ss_pred HHHHhCCCCHHHH
Q psy16144 97 TIMKAHPSYPKVH 109 (122)
Q Consensus 97 kVL~~~P~ypkir 109 (122)
++.+. .+|...
T Consensus 86 ~Aa~~--g~~~a~ 96 (138)
T 1klx_A 86 KACGL--NDQDGC 96 (138)
T ss_dssp HHHHT--TCHHHH
T ss_pred HHHcC--CCHHHH
Confidence 99876 455543
No 205
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.10 E-value=0.0023 Score=61.13 Aligned_cols=67 Identities=21% Similarity=0.075 Sum_probs=40.8
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHh----hC--HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYN----LF--PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDV 94 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e----~l--y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~v 94 (122)
++++.|.|++|.++++ +-. ..+|.+ .+ +++|...+++ .++|.+.+.||..+++.|++.|||+.
T Consensus 1058 Iai~lglyEEAf~IYkKa~~----~~~A~~VLie~i~nldrAiE~Aer------vn~p~vWsqLAKAql~~G~~kEAIds 1127 (1630)
T 1xi4_A 1058 IAISNELFEEAFAIFRKFDV----NTSAVQVLIEHIGNLDRAYEFAER------CNEPAVWSQLAKAQLQKGMVKEAIDS 1127 (1630)
T ss_pred HHHhCCCHHHHHHHHHHcCC----HHHHHHHHHHHHhhHHHHHHHHHh------cCCHHHHHHHHHHHHhCCCHHHHHHH
Confidence 7888899999988888 732 122211 11 3444333332 35577777777777777777777776
Q ss_pred HHHH
Q psy16144 95 SQTI 98 (122)
Q Consensus 95 c~kV 98 (122)
|.++
T Consensus 1128 YiKA 1131 (1630)
T 1xi4_A 1128 YIKA 1131 (1630)
T ss_pred HHhc
Confidence 6553
No 206
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.08 E-value=0.0014 Score=46.61 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhhCC-CChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 53 PDDAVVQYTQACRIIGT-SDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~-~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
-+.++..++...+-.+| ..-...|-||..+.|.|+|.+|...|+.+|+.+|+++.+.
T Consensus 54 ~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 54 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 45588888887776324 5668899999999999999999999999999999998774
No 207
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.06 E-value=0.00059 Score=57.58 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMV 118 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~ 118 (122)
|++|..+|.++ +-..+||.+|.+.|+|.+|++.++++ ++|+.++++.+-|..
T Consensus 138 yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 138 YDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVD 189 (449)
T ss_dssp TTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHH
Confidence 88888888876 45779999999999999999999999 589999998877653
No 208
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.04 E-value=0.0026 Score=41.57 Aligned_cols=57 Identities=5% Similarity=0.058 Sum_probs=47.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCc-------chHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYIS-------SATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~np-------s~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA 79 (122)
.+.+.|+|+.|..-++ +++..+ +....++.+ +++|...|++|+++ +|+++.+..+++
T Consensus 14 ~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l-~P~~~~~~~n~~ 87 (104)
T 2v5f_A 14 VAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL-DPEHQRANGNLK 87 (104)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-CCCCHHHHhhHH
Confidence 6778899999999999 988742 344555533 99999999999999 799999988887
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.02 E-value=0.0066 Score=48.68 Aligned_cols=98 Identities=10% Similarity=-0.059 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHH-HHhhCcc--hH-HHHh---hC--HHHHHHHHHHHHHhh---------CCCC
Q psy16144 10 QIIQTIAEWHFLLYLLPWRWEPLSAGLR-KKQYISS--AT-NIYN---LF--PDDAVVQYTQACRII---------GTSD 71 (122)
Q Consensus 10 ~~~~~~~~~~~LLyi~~gk~d~A~elL~-~l~~nps--~~-kA~e---~l--y~dAa~~ye~Aw~l~---------~~~~ 71 (122)
.++-.++|....+....+++.+|..+|+ ..+..|+ .+ .-|. .+ |++|...++.+.+.- +|+|
T Consensus 175 ~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~ 254 (310)
T 3mv2_B 175 EMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYK 254 (310)
T ss_dssp HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSH
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccccccCCCCC
Confidence 3344445554445555669999999999 9888886 21 2222 22 999999999666551 4889
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 72 LALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 72 ~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
|.+..+++.+..-.|+ +|.+..+++.+.+|++|-|.
T Consensus 255 ~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~ 290 (310)
T 3mv2_B 255 PTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIK 290 (310)
T ss_dssp HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHH
Confidence 9999899877777887 89999999999999999885
No 210
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.00 E-value=0.0012 Score=49.33 Aligned_cols=75 Identities=15% Similarity=0.053 Sum_probs=53.9
Q ss_pred hcCCCChHHHHHHHH-HHhhCcchHHH---------HhhC---------HHHHHHHHHHHHHhhC--CCCh---------
Q psy16144 23 YLLPWRWEPLSAGLR-KKQYISSATNI---------YNLF---------PDDAVVQYTQACRIIG--TSDL--------- 72 (122)
Q Consensus 23 yi~~gk~d~A~elL~-~l~~nps~~kA---------~e~l---------y~dAa~~ye~Aw~l~~--~~~~--------- 72 (122)
.+..|.|+.|+-+.. ++....+++.+ ..++ |..|...|++|+.+.+ ++++
T Consensus 30 L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ 109 (167)
T 3ffl_A 30 MAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNS 109 (167)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 445699999998888 66554443331 1111 9999999999977654 1111
Q ss_pred -------------HHHHHHHHHHHhcccHHHHHHHHHH
Q psy16144 73 -------------ALHQKLASLLLRMKRYAEAIDVSQT 97 (122)
Q Consensus 73 -------------~vgykLA~~ylk~kr~~~AI~vc~k 97 (122)
++-|++|-+|++.|++.+||.+.+.
T Consensus 110 ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 110 ASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 6889999999999999999995443
No 211
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.018 Score=44.18 Aligned_cols=91 Identities=8% Similarity=0.049 Sum_probs=69.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch------HHHHhhC---------HHHHHHHHHHHHHhhCCCC-----hHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA------TNIYNLF---------PDDAVVQYTQACRIIGTSD-----LALHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~------~kA~e~l---------y~dAa~~ye~Aw~l~~~~~-----~~vgykLA~ 80 (122)
++...|.+++|.++++ ++...++. .+.+..+ |.+|...++++...+...+ ..+...++.
T Consensus 104 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (434)
T 4b4t_Q 104 FEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESK 183 (434)
T ss_dssp HCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 7778899999999999 88765542 2222211 9999999999988754333 468899999
Q ss_pred HHHhcccHHHHHHHHHHHHHhCC---CCHHHHHHH
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKAHP---SYPKVHKQI 112 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~~P---~ypkir~~i 112 (122)
+|...|+|.+|...+++++...| +.+.+...+
T Consensus 184 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 218 (434)
T 4b4t_Q 184 VYHKLRNLAKSKASLTAARTAANSIYCPTQTVAEL 218 (434)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHH
Confidence 99999999999999999998754 344555444
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.85 E-value=0.0065 Score=50.19 Aligned_cols=61 Identities=15% Similarity=0.161 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHh----hCCCChHH---HHHHHHHHHhcccHHHHHHHHHHHHHh-----CCCCHHHHHHHH
Q psy16144 53 PDDAVVQYTQACRI----IGTSDLAL---HQKLASLLLRMKRYAEAIDVSQTIMKA-----HPSYPKVHKQIF 113 (122)
Q Consensus 53 y~dAa~~ye~Aw~l----~~~~~~~v---gykLA~~ylk~kr~~~AI~vc~kVL~~-----~P~ypkir~~il 113 (122)
|++|...|+++++. -+|++|.+ ..+||..|...|+|++|+..|+++|++ .|++|.+-....
T Consensus 314 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 386 (433)
T 3qww_A 314 PSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWL 386 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 89999999999974 36778766 568999999999999999999999976 578888765443
No 213
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.67 E-value=0.01 Score=47.82 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHh-----cccHHHHHHHHHHHHHhCCCC-HHH
Q psy16144 53 PDDAVVQYTQACRIIGTS--DLALHQKLASLLLR-----MKRYAEAIDVSQTIMKAHPSY-PKV 108 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~--~~~vgykLA~~ylk-----~kr~~~AI~vc~kVL~~~P~y-pki 108 (122)
-.+|....++|+++ +|+ +.++..-||..|.+ .|+.++|...++++|+++|+. +.+
T Consensus 179 l~~A~a~lerAleL-DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~ 241 (301)
T 3u64_A 179 VHAAVMMLERACDL-WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDH 241 (301)
T ss_dssp HHHHHHHHHHHHHH-CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHH
T ss_pred HHHHHHHHHHHHHh-CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchH
Confidence 88999999999999 899 78899999999999 599999999999999999975 443
No 214
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.62 E-value=0.0036 Score=59.76 Aligned_cols=69 Identities=10% Similarity=0.039 Sum_probs=54.4
Q ss_pred CCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHH
Q psy16144 25 LPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDV 94 (122)
Q Consensus 25 ~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~v 94 (122)
..|.++.|.++.. + +.+.+|.-+ ++||+.+|++| +|++..+++|..+.+.|+|++||..
T Consensus 1088 ~i~nldrAiE~Aerv-----n~p~vWsqLAKAql~~G~~kEAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIey 1156 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERC-----NEPAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKY 1156 (1630)
T ss_pred HHhhHHHHHHHHHhc-----CCHHHHHHHHHHHHhCCCHHHHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHH
Confidence 5666777777666 5 335555522 99999999886 7899999999999999999999999
Q ss_pred HHHHHHhCCC
Q psy16144 95 SQTIMKAHPS 104 (122)
Q Consensus 95 c~kVL~~~P~ 104 (122)
+..+.+..|+
T Consensus 1157 L~mArk~~~e 1166 (1630)
T 1xi4_A 1157 LQMARKKARE 1166 (1630)
T ss_pred HHHHHhhccc
Confidence 9988888753
No 215
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.45 E-value=0.015 Score=42.44 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
-+.++..++...+-+..+.-.-.|-||..+-|.|+|.+|...|+.+|+..|++..++
T Consensus 58 i~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 58 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp HHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 568889999988864336778899999999999999999999999999999998764
No 216
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.42 E-value=0.012 Score=49.60 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy16144 71 DLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQI 112 (122)
Q Consensus 71 ~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~i 112 (122)
+|.-.-.|...|.+.|++.|||..++++|..+|.+-.+..+.
T Consensus 206 ~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel 247 (449)
T 1b89_A 206 HADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL 247 (449)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHH
T ss_pred CHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 344455677899999999999999999999999988777654
No 217
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.39 E-value=0.0098 Score=42.88 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHhhCC-CChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHH
Q psy16144 53 PDDAVVQYTQACRIIGT-SDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVH 109 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~-~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir 109 (122)
...++..++...+-+ | ..-.-.|-||..+-|.|+|.+|...|+.+|+..|++..+.
T Consensus 59 ~~~GI~LLe~l~~~~-~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 59 ERLGVKILTDIYKEA-ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp HHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHHHHHhcC-cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 678899999988874 5 5678899999999999999999999999999999998774
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.83 E-value=0.063 Score=46.77 Aligned_cols=90 Identities=10% Similarity=0.040 Sum_probs=60.6
Q ss_pred HhcCCCChHHHHHHHH-HHhh-----------Cc-----------chHHHHhhC---------HHHHHHHHHHHHHhhCC
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQY-----------IS-----------SATNIYNLF---------PDDAVVQYTQACRIIGT 69 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~-----------np-----------s~~kA~e~l---------y~dAa~~ye~Aw~l~~~ 69 (122)
+.-+.|+++.|.++++ +++. +| +++..|-.. .+.|...|++|.+...+
T Consensus 387 ~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~ 466 (679)
T 4e6h_A 387 QYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKL 466 (679)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGG
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Confidence 6667788888888888 7764 24 244455422 67788888888876323
Q ss_pred CChHHHHHHHHHHHhccc-HHHHHHHHHHHHHhCCCCHHHHHH
Q psy16144 70 SDLALHQKLASLLLRMKR-YAEAIDVSQTIMKAHPSYPKVHKQ 111 (122)
Q Consensus 70 ~~~~vgykLA~~ylk~kr-~~~AI~vc~kVL~~~P~ypkir~~ 111 (122)
..+.+....|..-.+.++ +..|-.++++.|+..|+.|.++..
T Consensus 467 ~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~ 509 (679)
T 4e6h_A 467 VTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINK 509 (679)
T ss_dssp SCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHH
Confidence 345566565655555544 788888888888888888877643
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.80 E-value=0.018 Score=47.14 Aligned_cols=62 Identities=10% Similarity=0.033 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHh----hCCCChHH---HHHHHHHHHhcccHHHHHHHHHHHHHh-----CCCCHHHHHHHHH
Q psy16144 53 PDDAVVQYTQACRI----IGTSDLAL---HQKLASLLLRMKRYAEAIDVSQTIMKA-----HPSYPKVHKQIFE 114 (122)
Q Consensus 53 y~dAa~~ye~Aw~l----~~~~~~~v---gykLA~~ylk~kr~~~AI~vc~kVL~~-----~P~ypkir~~il~ 114 (122)
|++|...|+++++. -+|++|.+ ..+||..|...|+|.+|+..|+++|+. .|++|.+-.....
T Consensus 303 ~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~n 376 (429)
T 3qwp_A 303 WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMK 376 (429)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHH
Confidence 99999999999864 35677654 678999999999999999999999976 4788987655443
No 220
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.38 E-value=0.035 Score=45.73 Aligned_cols=56 Identities=13% Similarity=-0.017 Sum_probs=44.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASL 81 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ 81 (122)
.++-.|++++|...++ ++..||+ ..+|..+ +++|+..|++|..+ +|.+++ |.+..|
T Consensus 286 ~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL-~P~~~t--~~~~~~ 351 (372)
T 3ly7_A 286 SALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNL-RPGANT--LYWIEN 351 (372)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-SCSHHH--HHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-CCCcCh--HHHHhC
Confidence 4555699999999999 9999997 4454422 99999999999999 698763 444443
No 221
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.62 E-value=0.18 Score=43.96 Aligned_cols=84 Identities=7% Similarity=-0.119 Sum_probs=70.5
Q ss_pred hHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc---HHHHHHHH
Q psy16144 29 WEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR---YAEAIDVS 95 (122)
Q Consensus 29 ~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr---~~~AI~vc 95 (122)
.++-...|. .+..||.+...|..+ ++.|...|++++.. -|..+....+.+..-++.|. +..+..+|
T Consensus 48 ~~d~i~~lE~~l~~np~d~~~W~~yi~~~~~~~~~~~aR~vyEraL~~-fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~lf 126 (679)
T 4e6h_A 48 ESDVIGKLNDMIEEQPTDIFLYVKLLKHHVSLKQWKQVYETFDKLHDR-FPLMANIWCMRLSLEFDKMEELDAAVIEPVL 126 (679)
T ss_dssp CSCHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTC--CCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence 455566778 999999999999844 78899999999999 69999999999999999999 99999999
Q ss_pred HHHHHhCC--CCHHHHHHHH
Q psy16144 96 QTIMKAHP--SYPKVHKQIF 113 (122)
Q Consensus 96 ~kVL~~~P--~ypkir~~il 113 (122)
++.|...| .+++++..=+
T Consensus 127 eRal~~~~~~~sv~LW~~Yl 146 (679)
T 4e6h_A 127 ARCLSKELGNNDLSLWLSYI 146 (679)
T ss_dssp HHHTCSSSCCCCHHHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHHH
Confidence 99999994 5777766544
No 222
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=93.53 E-value=0.49 Score=34.26 Aligned_cols=49 Identities=12% Similarity=0.081 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcc---cHHHHHHHHHHHHHhC
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMK---RYAEAIDVSQTIMKAH 102 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~k---r~~~AI~vc~kVL~~~ 102 (122)
...+...|+.+... ++.++.+-|++|.++.+++ ...++|.+++++++.+
T Consensus 14 l~~~~~~y~~e~~~-~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~ 65 (152)
T 1pc2_A 14 LLKFEKKFQSEKAA-GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG 65 (152)
T ss_dssp HHHHHHHHHHHHHT-TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 45677889999887 6889999999999999999 7779999999999988
No 223
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.50 E-value=0.14 Score=42.45 Aligned_cols=72 Identities=17% Similarity=-0.027 Sum_probs=41.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhC-------CCChHHH---------
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIG-------TSDLALH--------- 75 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~-------~~~~~vg--------- 75 (122)
++++.|++++|.++.+ . +....|+.+ ++.|+.+|.++=.+.+ ..++.-.
T Consensus 661 ~~l~~~~~~~A~~~~~~~-----~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~ 735 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTDE-----SAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAET 735 (814)
T ss_dssp HHHHHTCHHHHHHHHTTC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHHhh-----CcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHH
Confidence 5666677777777655 3 234445422 7777777777522210 1222221
Q ss_pred ---HHHHH-HHHhcccHHHHHHHHHHH
Q psy16144 76 ---QKLAS-LLLRMKRYAEAIDVSQTI 98 (122)
Q Consensus 76 ---ykLA~-~ylk~kr~~~AI~vc~kV 98 (122)
++.|+ +|++.|++++|+++|.+.
T Consensus 736 ~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 736 TGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp TTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred cCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 22355 677888888888888754
No 224
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.16 E-value=0.69 Score=38.34 Aligned_cols=83 Identities=11% Similarity=-0.042 Sum_probs=67.2
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhh--CcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQY--ISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLL 82 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~--nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~y 82 (122)
.+..| .|.+.|++++|.++|+ ..+. .|+ ...|.-+ .++|...|+.-.+.+-.-|......|-..|
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~ 185 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR-LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc-cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 35555 8999999999999999 7664 343 4455522 999999999998886666788888899999
Q ss_pred HhcccHHHHHHHHHHHHH
Q psy16144 83 LRMKRYAEAIDVSQTIMK 100 (122)
Q Consensus 83 lk~kr~~~AI~vc~kVL~ 100 (122)
.+.|+.++|.+++++.-+
T Consensus 186 ~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 186 MDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHHH
Confidence 999999999999998654
No 225
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.38 E-value=1.4 Score=36.25 Aligned_cols=91 Identities=8% Similarity=-0.041 Sum_probs=66.7
Q ss_pred HHHHH--HhcCCCChHHHHHHHH-HHhhCcchHHHHhh-----------------------------------------C
Q psy16144 17 EWHFL--LYLLPWRWEPLSAGLR-KKQYISSATNIYNL-----------------------------------------F 52 (122)
Q Consensus 17 ~~~~L--Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~-----------------------------------------l 52 (122)
-|.+. .+.+.|+.+.|.+.+. ++.. |.+..-|.. +
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 36656 6778899999999999 9998 876543310 0
Q ss_pred --------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 53 --------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMK-RYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 53 --------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~k-r~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
.+.|-..|++| .. .+....+....|..-...+ ..+.|..+++..++..|+.|..+.
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~-~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~ 358 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GN-EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKE 358 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TT-SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHh-hC-CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHH
Confidence 45577788888 44 2335667777676665556 489999999999999999987643
No 226
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=90.17 E-value=3 Score=34.49 Aligned_cols=79 Identities=11% Similarity=-0.070 Sum_probs=55.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhC--cchHHHHhhC------------------HHHHHHHHHHHHHhhCCCChHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYI--SSATNIYNLF------------------PDDAVVQYTQACRIIGTSDLALHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~n--ps~~kA~e~l------------------y~dAa~~ye~Aw~l~~~~~~~vgykLA~ 80 (122)
.+.+.|+.++|.++|+ ..+.. |+ ...|.-+ .++|...|+.-.+.+-+-|......|-.
T Consensus 35 ~c~k~G~~~~A~~lf~~M~~~Gv~pd-~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~ 113 (501)
T 4g26_A 35 MCSKKGDVLEALRLYDEARRNGVQLS-QYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGAR 113 (501)
T ss_dssp HTTTSCCHHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHcCCCCC-HhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 8899999999999999 66542 33 3333311 4667777777666644446666777777
Q ss_pred HHHhcccHHHHHHHHHHHHHh
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~ 101 (122)
.|.+.|+.++|.+++++..+.
T Consensus 114 ~~~~~g~~~~A~~l~~~M~~~ 134 (501)
T 4g26_A 114 LAVAKDDPEMAFDMVKQMKAF 134 (501)
T ss_dssp HHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHHHHHHHHHc
Confidence 888888888888888777654
No 227
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=89.82 E-value=0.4 Score=33.82 Aligned_cols=27 Identities=11% Similarity=-0.128 Sum_probs=12.6
Q ss_pred hcCCCChHHHHHHHH-HHhhCcchHHHH
Q psy16144 23 YLLPWRWEPLSAGLR-KKQYISSATNIY 49 (122)
Q Consensus 23 yi~~gk~d~A~elL~-~l~~nps~~kA~ 49 (122)
+.+.|+|++|..+++ +|+..|++..|.
T Consensus 84 ~yklg~Y~~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 84 NYRLKEYEKALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 334444444444444 444444444443
No 228
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.61 E-value=1.4 Score=36.31 Aligned_cols=53 Identities=6% Similarity=-0.171 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 56 AVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 56 Aa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
....|++|+.. .|.++.+.+..|.-+...|+.++|.+++++++.. |....++.
T Consensus 198 v~~~ye~al~~-~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~ 250 (493)
T 2uy1_A 198 MHFIHNYILDS-FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSL 250 (493)
T ss_dssp HHHHHHHHHHH-TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHH
Confidence 45689999998 5999999999999999999999999999999999 98876653
No 229
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=89.39 E-value=3.9 Score=33.01 Aligned_cols=83 Identities=11% Similarity=0.126 Sum_probs=55.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcch--------HHHHh-------hC----------------HHHHHHHHHHHHHhhCC
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSA--------TNIYN-------LF----------------PDDAVVQYTQACRIIGT 69 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~--------~kA~e-------~l----------------y~dAa~~ye~Aw~l~~~ 69 (122)
=+...|||.+|.+.|+ .|..-|-. ..+.+ |. .++-.++.|.|-=++..
T Consensus 111 k~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELAAYFT~c 190 (320)
T 3mkr_B 111 QLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHS 190 (320)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHTTS
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHhccC
Confidence 4567899999999999 88766521 12222 22 13445556666555544
Q ss_pred CChHHHHHHHH-----HHHhcccHHHHHHHHHHHHHhCCC
Q psy16144 70 SDLALHQKLAS-----LLLRMKRYAEAIDVSQTIMKAHPS 104 (122)
Q Consensus 70 ~~~~vgykLA~-----~ylk~kr~~~AI~vc~kVL~~~P~ 104 (122)
+--.+.--|+- .-.|.|+|.-|...+++.|+..|+
T Consensus 191 ~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 191 NLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred CCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 44444433332 356999999999999999999985
No 230
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=88.98 E-value=2.1 Score=34.23 Aligned_cols=92 Identities=10% Similarity=0.013 Sum_probs=62.0
Q ss_pred cchhHHHHHHHHHHHHHHHhcCCCChHHHHHHHH-HHhhCcchHHH------Hh-----------------------hC-
Q psy16144 4 LSVDTMQIIQTIAEWHFLLYLLPWRWEPLSAGLR-KKQYISSATNI------YN-----------------------LF- 52 (122)
Q Consensus 4 ~~~~~~~~~~~~~~~~~LLyi~~gk~d~A~elL~-~l~~nps~~kA------~e-----------------------~l- 52 (122)
..||..+.-+.+++..- ....|+.+.|.+.|+ ++....+.+-+ |. ..
T Consensus 108 ~~~D~~~f~~l~~~~~~--~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g 185 (388)
T 2ff4_A 108 NTCDLGRFVAEKTAGVH--AAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACG 185 (388)
T ss_dssp GGBHHHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHH--HHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 34565555444443322 123577888888888 88776542111 10 00
Q ss_pred -HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy16144 53 -PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTI 98 (122)
Q Consensus 53 -y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kV 98 (122)
+.+|+...+.+... +|-+..+...|-.+|.+.|+..+|+++|++.
T Consensus 186 ~~~~a~~~l~~~~~~-~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 186 RASAVIAELEALTFE-HPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp CHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 78888888888888 7888888888888899999999998888764
No 231
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=88.47 E-value=1.9 Score=36.36 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIF 113 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il 113 (122)
+..|...|++|..+ +|++.....-||....-.|+..+|+=-|-+.|.....+|..+..+.
T Consensus 168 ~~~A~~~Y~~A~~~-~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~ 227 (497)
T 1ya0_A 168 TSQAESYYRHAAQL-VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQ 227 (497)
T ss_dssp HHHHHHHHHHHHHH-CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHH
Confidence 89999999999999 7999999999999999999999999999999988878999987664
No 232
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=88.34 E-value=0.99 Score=33.36 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhhCCCChH---------HHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy16144 53 PDDAVVQYTQACRIIGTSDLA---------LHQKLASLLLRMKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~---------vgykLA~~ylk~kr~~~AI~vc~kVL~~~ 102 (122)
|+.|+.....+..++ ++++. +.+-+|..+...|.|..|+..|+++|.+.
T Consensus 36 Y~sA~~La~lLlSl~-~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 36 HSNVRLLSSLLLTLS-NNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp HHHHHHHHHHHHHHH-HHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh-cCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999999999999996 55555 78889999999999999999999987553
No 233
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=85.42 E-value=7.3 Score=31.52 Aligned_cols=97 Identities=15% Similarity=0.034 Sum_probs=56.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcc--------hHHHHhhC-----HHHH---------------HHHHHHHHHhhCCCCh
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISS--------ATNIYNLF-----PDDA---------------VVQYTQACRIIGTSDL 72 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps--------~~kA~e~l-----y~dA---------------a~~ye~Aw~l~~~~~~ 72 (122)
=+...|||++|.+.|+ .|..-|- -..+.+++ |-=| .++.|-|-=++..+--
T Consensus 123 k~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYFT~c~LQ 202 (325)
T 3mv2_A 123 KNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYFTKAKLS 202 (325)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHGGGSCCC
T ss_pred HHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhccCCCc
Confidence 4567899999999999 8876442 11222222 3222 2333333333322222
Q ss_pred HHHHHHH-----HHHHhcccHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHh
Q psy16144 73 ALHQKLA-----SLLLRMKRYAEAIDVSQTIMKAHPSYPKV--HKQIFEKAMV 118 (122)
Q Consensus 73 ~vgykLA-----~~ylk~kr~~~AI~vc~kVL~~~P~ypki--r~~il~ka~~ 118 (122)
.+.--|+ ..-.|.|+|.-|...+++.|+..|+-+.+ -+.|+.+|.+
T Consensus 203 p~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~qArkil~~ce~ 255 (325)
T 3mv2_A 203 PIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADS 255 (325)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhc
Confidence 2222222 13469999999999999999999964433 2235555543
No 234
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=85.19 E-value=2 Score=28.07 Aligned_cols=26 Identities=23% Similarity=0.238 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQIFEKA 116 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~il~ka 116 (122)
+||+.|..+++..| +|..|..|-.|+
T Consensus 41 ~Aie~ll~alk~e~-d~~~k~~lr~K~ 66 (86)
T 4a5x_A 41 EGIDLLLQVLKGTK-DNTKRCNLREKI 66 (86)
T ss_dssp HHHHHHHHHHHTCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC-CHHHHHHHHHHH
Confidence 33444444554444 344444444443
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=83.76 E-value=3.5 Score=36.65 Aligned_cols=48 Identities=13% Similarity=0.166 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCC
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSY 105 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~y 105 (122)
|+-|...-++|..+ .|++...+++||-+|.+.|+|+.|+- +|---|-+
T Consensus 353 ~elAL~~Ak~AV~~-aPseF~tW~~La~vYi~l~d~e~ALL----tLNScPm~ 400 (754)
T 4gns_B 353 YELALGVSNTSTEL-ALDSFESWYNLARCHIKKEEYEKALF----AINSMPRL 400 (754)
T ss_dssp HHHHHHHHHHHHHH-CSSCHHHHHHHHHHHHHTTCHHHHHH----HHHHSCC-
T ss_pred HHHHHHHHHHHHhc-CchhhHHHHHHHHHHHHhccHHHHHH----HHhcCCCc
Confidence 99999999999999 59999999999999999999999987 45555643
No 236
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=83.33 E-value=1.2 Score=30.25 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHH
Q psy16144 74 LHQKLASLLLRMKRYAEAIDVSQTIM 99 (122)
Q Consensus 74 vgykLA~~ylk~kr~~~AI~vc~kVL 99 (122)
.--+.|-.+++.|+|+|||++.+++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 34567889999999999999776654
No 237
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=83.20 E-value=7.4 Score=32.09 Aligned_cols=40 Identities=20% Similarity=0.127 Sum_probs=31.8
Q ss_pred HHHHHHHhhC-CCChHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy16144 59 QYTQACRIIG-TSDLALHQKLASLLLRMKRYAEAIDVSQTI 98 (122)
Q Consensus 59 ~ye~Aw~l~~-~~~~~vgykLA~~ylk~kr~~~AI~vc~kV 98 (122)
.++.|+++.+ .+++...-+||..+++.+++..|+.+|.+.
T Consensus 667 ~~~~A~~~~~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 667 QLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp CHHHHHHHHTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4455555542 256889999999999999999999999875
No 238
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=81.55 E-value=1.4 Score=31.51 Aligned_cols=44 Identities=7% Similarity=-0.196 Sum_probs=22.9
Q ss_pred HHHHHHH-HHhhCcch-HHHHhhC---------HHHHHHHHHHHHHhhCCCChHHH
Q psy16144 31 PLSAGLR-KKQYISSA-TNIYNLF---------PDDAVVQYTQACRIIGTSDLALH 75 (122)
Q Consensus 31 ~A~elL~-~l~~nps~-~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vg 75 (122)
.++++|. .++.+|+. -..+.|+ |..|..+-+..++. .|+|..+-
T Consensus 61 ~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~-eP~N~QA~ 115 (134)
T 3o48_A 61 LGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH-ERNNKQVG 115 (134)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-CTTCHHHH
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh-CCCCHHHH
Confidence 5666666 55555532 1222222 66666666666666 46665543
No 239
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=80.58 E-value=8.2 Score=26.46 Aligned_cols=13 Identities=8% Similarity=-0.240 Sum_probs=7.3
Q ss_pred hHHHHHHHH-HHhh
Q psy16144 29 WEPLSAGLR-KKQY 41 (122)
Q Consensus 29 ~d~A~elL~-~l~~ 41 (122)
.+.|.++++ +++.
T Consensus 15 l~kAi~lv~~Ave~ 28 (117)
T 2cpt_A 15 LQKAIDLASKAAQE 28 (117)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 355666666 5543
No 240
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.27 E-value=2 Score=36.91 Aligned_cols=55 Identities=11% Similarity=-0.062 Sum_probs=41.4
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcc-------hHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISS-------ATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKL 78 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps-------~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykL 78 (122)
.|+..+.|++|..++. +. .|. ...++.|+ |.+|..++..||..+.++..+.|++.
T Consensus 240 nYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~ 311 (523)
T 4b4t_S 240 DFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQ 311 (523)
T ss_dssp HHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHHH
T ss_pred HHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHHH
Confidence 9999999999999999 63 332 24444444 99999999999999744555667663
No 241
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=79.21 E-value=18 Score=28.44 Aligned_cols=83 Identities=10% Similarity=0.010 Sum_probs=46.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhCHHHHH--HHHHHHHHhhC-------CCChHHHHHH-HHHHHhcccHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLFPDDAV--VQYTQACRIIG-------TSDLALHQKL-ASLLLRMKRYAE 90 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~ly~dAa--~~ye~Aw~l~~-------~~~~~vgykL-A~~ylk~kr~~~ 90 (122)
|++=.|+++.|.+-|+ +.+.+|+....-. +|.+++ +.++..+=-++ +..+.+..-+ |...+..|+..+
T Consensus 40 LLcv~G~w~RA~~QL~~~a~l~p~~~~~a~-~yr~lI~aE~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~ 118 (273)
T 1zbp_A 40 LLCIDGDFERADEQLMQSIKLFPEYLPGAS-QLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQ 118 (273)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHhCchhhHHHH-HHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHH
Confidence 5565677777777777 7777777444321 133332 23333333211 1112222222 333445788888
Q ss_pred HHHHHHHHHHhCCCC
Q psy16144 91 AIDVSQTIMKAHPSY 105 (122)
Q Consensus 91 AI~vc~kVL~~~P~y 105 (122)
|.+...++++.-|..
T Consensus 119 A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 119 VSELALQIEELRQEK 133 (273)
T ss_dssp HHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHhcCccc
Confidence 888888888887754
No 242
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=78.87 E-value=2.4 Score=30.62 Aligned_cols=21 Identities=5% Similarity=-0.186 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHhhCCCChHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLAL 74 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~v 74 (122)
|.+|..+-+..++. .|+|..+
T Consensus 93 Y~~Ar~y~d~lL~~-eP~n~QA 113 (144)
T 1y8m_A 93 YSMAKRYVDTLFEH-ERNNKQV 113 (144)
T ss_dssp HHHHHHHHHHHHHT-CCCCHHH
T ss_pred HHHHHHHHHHHHhc-CCCcHHH
Confidence 55555555555555 3555443
No 243
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.95 E-value=1.6 Score=39.74 Aligned_cols=75 Identities=12% Similarity=-0.035 Sum_probs=53.5
Q ss_pred HHH--HhcCCCChHHHHHHHH-HHh-h----------------------CcchHHHHhhC---------HHHHHHHHHHH
Q psy16144 19 HFL--LYLLPWRWEPLSAGLR-KKQ-Y----------------------ISSATNIYNLF---------PDDAVVQYTQA 63 (122)
Q Consensus 19 ~~L--Lyi~~gk~d~A~elL~-~l~-~----------------------nps~~kA~e~l---------y~dAa~~ye~A 63 (122)
+++ +|+..|++++|.++|+ +-. . +.+.+.+|..+ |+.++..-+.|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 455 8999999999999997 421 1 11111222211 77788888889
Q ss_pred HHhhCCCChH----HHHHHHHHHHhcccHHHHHH
Q psy16144 64 CRIIGTSDLA----LHQKLASLLLRMKRYAEAID 93 (122)
Q Consensus 64 w~l~~~~~~~----vgykLA~~ylk~kr~~~AI~ 93 (122)
++...++++. ...++...++..|+|++|-+
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~ 959 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHV 959 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHH
Confidence 9988777764 56778889999999999865
No 244
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=75.69 E-value=2.8 Score=33.95 Aligned_cols=81 Identities=6% Similarity=0.001 Sum_probs=53.0
Q ss_pred HhcCCCChHHHHHHHH--HHhhCcchHHHHhhC-HHHHHHHHHHHHH---------------hhCCC----------ChH
Q psy16144 22 LYLLPWRWEPLSAGLR--KKQYISSATNIYNLF-PDDAVVQYTQACR---------------IIGTS----------DLA 73 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~--~l~~nps~~kA~e~l-y~dAa~~ye~Aw~---------------l~~~~----------~~~ 73 (122)
-++..|.||.|..+|+ .=-.|....+.+..- | .+...|-.++- -+++. +..
T Consensus 37 dhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~~y-~~s~~~l~~~~~~lp~l~~~~~r~~~e~~~~~~lP~i~~l~~L~ 115 (325)
T 3mv2_A 37 VLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIY-EGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVPGLDVVN 115 (325)
T ss_dssp HHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHHHH-HHTEEEECCSSTTSCCEEEECBSSCSSSCGGGCCBCCCCHHHHH
T ss_pred HHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHH-HHHhhhcccCCCCCCcchhhhcCCccccccccCCCCCCCHHHHH
Confidence 5778899999999999 555566666655422 2 12222222221 00000 012
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 74 LHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 74 vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
-..+-||-+.+.|++.||+++++.+|-.=|
T Consensus 116 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 145 (325)
T 3mv2_A 116 EKMNEGYKNFKLNKPDIAIECFREAIYRIT 145 (325)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 256889999999999999999999997765
No 245
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=73.30 E-value=16 Score=27.94 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=70.3
Q ss_pred HHHHH----HhcCCCChHHHHHHHHHHhhCcchHHHHhhC-------HHHHHHHHHHHHHh----------------hCC
Q psy16144 17 EWHFL----LYLLPWRWEPLSAGLRKKQYISSATNIYNLF-------PDDAVVQYTQACRI----------------IGT 69 (122)
Q Consensus 17 ~~~~L----Lyi~~gk~d~A~elL~~l~~nps~~kA~e~l-------y~dAa~~ye~Aw~l----------------~~~ 69 (122)
|..+| ||.. |.|.-|.-+|. +.|---+..|+++ |+.|..+.++.++- .+|
T Consensus 34 eY~lL~~I~Lyyn-gEY~R~Lf~L~--~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~ 110 (242)
T 3kae_A 34 EYRMLMSIVLYLN-GEYTRALFHLH--KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDP 110 (242)
T ss_dssp CTHHHHHHHHHHT-TCHHHHHHHHH--TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCT
T ss_pred HHHhhhhhhhhhc-chHhHHHHHHH--hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeecc
Confidence 44555 6666 88887776554 2354445666655 99999999999832 234
Q ss_pred CChHHHHH-HHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy16144 70 SDLALHQK-LASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEK 115 (122)
Q Consensus 70 ~~~~vgyk-LA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~k 115 (122)
.|.+..|. +|-..-..|.-+|||..+......+|=+|.|..-|++.
T Consensus 111 ~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnliyeN 157 (242)
T 3kae_A 111 GDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENLLLEN 157 (242)
T ss_dssp TCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHHHHhhc
Confidence 55566665 57777789999999999999999999999998766653
No 246
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=66.28 E-value=25 Score=25.78 Aligned_cols=17 Identities=6% Similarity=-0.121 Sum_probs=11.7
Q ss_pred HHHhcccHHHHHHHHHH
Q psy16144 81 LLLRMKRYAEAIDVSQT 97 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~k 97 (122)
+++-.|++++|++++.+
T Consensus 98 ~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 98 NTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH
Confidence 46677777777776654
No 247
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=66.07 E-value=25 Score=25.78 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=72.5
Q ss_pred HHHH-HhcCCCCh------HHHHHHHH-HHhhCcch-HHHHh---hC------------HHHHHHHHHHHHHhhCCCChH
Q psy16144 18 WHFL-LYLLPWRW------EPLSAGLR-KKQYISSA-TNIYN---LF------------PDDAVVQYTQACRIIGTSDLA 73 (122)
Q Consensus 18 ~~~L-Lyi~~gk~------d~A~elL~-~l~~nps~-~kA~e---~l------------y~dAa~~ye~Aw~l~~~~~~~ 73 (122)
|.++ +.=..|.. +.-.+.+. ++..-|-. .+.|+ |+ .++|-..|+.|..+ +..+.-
T Consensus 17 ~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~-hKkFAK 95 (161)
T 4h7y_A 17 LSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN-CKKFAF 95 (161)
T ss_dssp HHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH-CTTBHH
T ss_pred HHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-hHHHHH
Confidence 3344 33334776 66667777 66655542 22222 11 67789999999998 789999
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccC
Q psy16144 74 LHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMVHLR 121 (122)
Q Consensus 74 vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~~lr 121 (122)
+..--|..=.+.|....|..+..+++...|. | ++.|+-|.++|.
T Consensus 96 iwi~~AqFEiRqgnl~kARkILg~AiG~~~k-~---~~~le~a~~nl~ 139 (161)
T 4h7y_A 96 VHISFAQFELSQGNVKKSKQLLQKAVERGAV-P---LEMLEIALRNLN 139 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB-C---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHhccCCC-c---HHHHHHHHHhhh
Confidence 9999999999999999999999999998884 3 367777777653
No 248
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=65.19 E-value=3.7 Score=31.47 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=26.2
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFE 114 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ 114 (122)
.+.++.|.|.+|++|.+++...+|++-+.|++.+-
T Consensus 125 ~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~ 159 (211)
T 3bqo_A 125 AVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLM 159 (211)
T ss_dssp HHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 46899999999999999999999999888887653
No 249
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=64.18 E-value=47 Score=25.92 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=51.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH-HHhhC---HHHHHHHHHHHHHhhC-----C--CChHHHHHHHHHHHhcccHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN-IYNLF---PDDAVVQYTQACRIIG-----T--SDLALHQKLASLLLRMKRYA 89 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k-A~e~l---y~dAa~~ye~Aw~l~~-----~--~~~~vgykLA~~ylk~kr~~ 89 (122)
|.-|.++||+..+..+ +.+.++.-.. =..++ |+..+...+.+|+.-. + ....-..++...| +.+=-.
T Consensus 40 LaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i~~y-r~kIe~ 118 (261)
T 3ubw_A 40 LAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREY-RQMVET 118 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH-HHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHHHHH-HHHHHH
Confidence 8899999999999999 9888875221 11133 9999999999999621 0 0112223444444 233334
Q ss_pred HHHHHHHHHHHh
Q psy16144 90 EAIDVSQTIMKA 101 (122)
Q Consensus 90 ~AI~vc~kVL~~ 101 (122)
|-.++|..||.+
T Consensus 119 EL~~iC~dil~l 130 (261)
T 3ubw_A 119 ELKLICCDILDV 130 (261)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 557788888754
No 250
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=63.92 E-value=18 Score=28.75 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy16144 75 HQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFE 114 (122)
Q Consensus 75 gykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ 114 (122)
...++-.++..|++.+|+..+++.+..||-.-.++...|.
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~ 213 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLIT 213 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4467888999999999999999999999998888776654
No 251
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=63.90 E-value=20 Score=31.83 Aligned_cols=41 Identities=7% Similarity=-0.008 Sum_probs=33.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQ 62 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~ 62 (122)
-.++.|+||.|.++-+ ++..-||....|+.+ |+.|.-....
T Consensus 346 FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 346 FLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 3456899999999999 999999999999966 6666655433
No 252
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=63.27 E-value=26 Score=22.25 Aligned_cols=14 Identities=0% Similarity=-0.368 Sum_probs=7.1
Q ss_pred HHHHHHHH-HHhhCc
Q psy16144 30 EPLSAGLR-KKQYIS 43 (122)
Q Consensus 30 d~A~elL~-~l~~np 43 (122)
+.|.++++ +++.+.
T Consensus 9 ~~Ai~lv~~Ave~D~ 23 (83)
T 2v6y_A 9 DMARKYAILAVKADK 23 (83)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 35555555 555443
No 253
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=61.12 E-value=5.6 Score=30.90 Aligned_cols=61 Identities=13% Similarity=0.175 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHhhCCCChHH------HH--HHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLAL------HQ--KLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFE 114 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~v------gy--kLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ 114 (122)
.+.|...++.--+-. +-+... .. -.-.+.++.|.|.+|++|.+++...+|++-+.|++.+-
T Consensus 88 LESAl~v~~~I~~e~-~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~ 156 (235)
T 3bu8_A 88 LESAINVLEMIKTEF-TLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLN 156 (235)
T ss_dssp HHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 667777776665552 211111 11 12235689999999999999999988888888887653
No 254
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=59.07 E-value=32 Score=21.95 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy16144 90 EAIDVSQTIMKAHPSYPKVHKQIFEK 115 (122)
Q Consensus 90 ~AI~vc~kVL~~~P~ypkir~~il~k 115 (122)
+||+.+.++++..|| ++.+.-|-.|
T Consensus 44 ~aie~l~~alk~e~d-~~~k~~ir~K 68 (83)
T 2w2u_A 44 KAIEVLAQLVSLYRD-GSTAAIYEQM 68 (83)
T ss_dssp HHHHHHHHHHHHSTT-SSTHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-HHHHHHHHHH
Confidence 333444455555553 3334334333
No 255
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=57.66 E-value=27 Score=22.16 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=28.1
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy16144 76 QKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEK 115 (122)
Q Consensus 76 ykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~k 115 (122)
..+|-.++..|.+++|+..+-++++..| +|.---.|+++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~-qP~~LL~i~q~ 59 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCG-QPQQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCS-SCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHh
Confidence 3567777778888888887888888888 56555566665
No 256
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=56.69 E-value=37 Score=21.95 Aligned_cols=38 Identities=8% Similarity=-0.027 Sum_probs=20.0
Q ss_pred ChHHHHHHHH-HHhhCcchHHHHhhC--HHHHHHHHHHHHHh
Q psy16144 28 RWEPLSAGLR-KKQYISSATNIYNLF--PDDAVVQYTQACRI 66 (122)
Q Consensus 28 k~d~A~elL~-~l~~nps~~kA~e~l--y~dAa~~ye~Aw~l 66 (122)
-.+.|.++++ +++.+.. ...-+-+ |.+|+..|..+.+.
T Consensus 11 ~l~~Ai~lv~~Ave~D~~-g~y~eAl~~Y~~Aie~l~~alk~ 51 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAE-SRYQQALVCYQEGIDMLLQVLKG 51 (93)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777 6665443 2222211 55555555555555
No 257
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=55.43 E-value=61 Score=26.33 Aligned_cols=80 Identities=16% Similarity=0.220 Sum_probs=55.3
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------------HHHHHHHHHHHHHhhC---CCChH--HHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------------PDDAVVQYTQACRIIG---TSDLA--LHQKLAS 80 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------------y~dAa~~ye~Aw~l~~---~~~~~--vgykLA~ 80 (122)
+|.+.|++++-.+++. ....-++.++|.-.- .+.=...-..+.+-++ ..+.. +-.+||.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~ 107 (394)
T 3txn_A 28 LYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIA 107 (394)
T ss_dssp HHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 888888888877510 1111222222222211 22222 4459999
Q ss_pred HHHhcccHHHHHHHHHHHHHh
Q psy16144 81 LLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 81 ~ylk~kr~~~AI~vc~kVL~~ 101 (122)
.|+..|+|.+|..++.++++.
T Consensus 108 l~~~~~~y~~a~~~i~~l~~~ 128 (394)
T 3txn_A 108 LYFDTALYTEALALGAQLLRE 128 (394)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHH
Confidence 999999999999999888774
No 258
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=55.26 E-value=24 Score=24.06 Aligned_cols=43 Identities=5% Similarity=-0.027 Sum_probs=32.2
Q ss_pred chhHHHHHHHHHHHHHH-----HhcCCCChHHHHHHHH-HHhhCcchHHHHh
Q psy16144 5 SVDTMQIIQTIAEWHFL-----LYLLPWRWEPLSAGLR-KKQYISSATNIYN 50 (122)
Q Consensus 5 ~~~~~~~~~~~~~~~~L-----Lyi~~gk~d~A~elL~-~l~~nps~~kA~e 50 (122)
..-.|+||-.-.+.+-+ =..+.|+|++|.++++ + +....+|+.
T Consensus 9 e~~~m~iI~~aG~Ars~~~eAl~~Ak~gdfe~A~~~l~eA---~~~l~~AH~ 57 (109)
T 3k1s_A 9 EQIPFQLILNSGNARSFAMEALQFAKQGKMAEADEAMVKA---KEAINEAHH 57 (109)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH---HHHHHHHHH
Confidence 44568998877776666 5668899999999999 7 335566665
No 259
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=53.99 E-value=38 Score=21.24 Aligned_cols=13 Identities=0% Similarity=-0.261 Sum_probs=6.9
Q ss_pred hHHHHHHHH-HHhh
Q psy16144 29 WEPLSAGLR-KKQY 41 (122)
Q Consensus 29 ~d~A~elL~-~l~~ 41 (122)
.+.|.++++ +++.
T Consensus 10 l~~A~~l~~~Av~~ 23 (85)
T 2v6x_A 10 LTKGIELVQKAIDL 23 (85)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 345556655 5544
No 260
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=53.28 E-value=12 Score=30.15 Aligned_cols=82 Identities=15% Similarity=0.076 Sum_probs=51.5
Q ss_pred HhcCCCChHHHHHHHH--HHhhCcchHHHHhhC-HHHHHH-------------HHHHHHHhhCCCC-----------hHH
Q psy16144 22 LYLLPWRWEPLSAGLR--KKQYISSATNIYNLF-PDDAVV-------------QYTQACRIIGTSD-----------LAL 74 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~--~l~~nps~~kA~e~l-y~dAa~-------------~ye~Aw~l~~~~~-----------~~v 74 (122)
-++-.|.||.|..+|+ .=-.|....+.+..- |..+-. +.++-|+-+++++ ..-
T Consensus 25 dhvaAGsFe~A~~lLnrQ~Givnf~PLk~~F~~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~~l~~ 104 (320)
T 3mkr_B 25 DHILAGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQ 104 (320)
T ss_dssp HHHHTTCHHHHHHHHHHHSCBCCCGGGHHHHHHHHTTSCEEECSSTTSCCEEECCBTTTTTCCSSSCCBCCCCCHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhccCCCCCCcchhhhcCCccccccccCCCCcccCHHHHHH
Confidence 5778899999999998 434455555544311 000000 0011222222221 223
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 75 HQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 75 gykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
..+-||-+.+.|++.||+++++.+|-.=|
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 133 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVP 133 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 57889999999999999999999998876
No 261
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=49.94 E-value=83 Score=23.98 Aligned_cols=79 Identities=9% Similarity=-0.005 Sum_probs=51.0
Q ss_pred HhcCCCChHHHHHHHH-HHh----hCcchH-HHHhhC---HHHHHHHHHHHHHhhCC-----CChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQ----YISSAT-NIYNLF---PDDAVVQYTQACRIIGT-----SDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~----~nps~~-kA~e~l---y~dAa~~ye~Aw~l~~~-----~~~~vgykLA~~ylk~kr 87 (122)
|.-|.++||+..+..+ +++ .++.-. .=..++ |+..+...+.+|+.-.. ....-.-.+...| +.+=
T Consensus 15 laeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqkek~~~~~~~~i~~y-r~ki 93 (227)
T 2o8p_A 15 VFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQLNNDELVKICSEY-VFSL 93 (227)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHH-HHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHH
Confidence 8889999999999999 887 666411 111122 99999999999976310 1112233445555 3334
Q ss_pred HHHHHHHHHHHHHh
Q psy16144 88 YAEAIDVSQTIMKA 101 (122)
Q Consensus 88 ~~~AI~vc~kVL~~ 101 (122)
-.+-.++|..||..
T Consensus 94 e~EL~~iC~dil~l 107 (227)
T 2o8p_A 94 RKDIKAFLQSFEDC 107 (227)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHH
Confidence 44557788888753
No 262
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=49.06 E-value=26 Score=25.83 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=28.1
Q ss_pred CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy16144 68 GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMK 100 (122)
Q Consensus 68 ~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~ 100 (122)
++-+|++.+++|.+|-|.|.-.+|-++..++=+
T Consensus 121 ~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 121 NEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 355699999999999999999999988776643
No 263
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=48.81 E-value=22 Score=22.61 Aligned_cols=52 Identities=17% Similarity=0.075 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy16144 54 DDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEK 115 (122)
Q Consensus 54 ~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~k 115 (122)
++|+....+|.+.-+..+-.-++. -|.+||+.+.++++..|| |+.+.-|-.|
T Consensus 9 ~~Ai~lv~~Ave~D~~g~y~eAl~---------lY~~aie~l~~~lk~e~d-~~~k~~ir~K 60 (83)
T 2v6y_A 9 DMARKYAILAVKADKEGKVEDAIT---------YYKKAIEVLSQIIVLYPE-SVARTAYEQM 60 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHH---------HHHHHHHHHHHHHHHCTT-CTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHH---------HHHHHHHHHHHHHHHCCC-HHHHHHHHHH
Confidence 455566666655543333333222 255677777777777763 3344444444
No 264
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=47.95 E-value=61 Score=25.43 Aligned_cols=47 Identities=13% Similarity=-0.022 Sum_probs=38.3
Q ss_pred hcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCC
Q psy16144 23 YLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTS 70 (122)
Q Consensus 23 yi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~ 70 (122)
.++.|..++|.+.+. .++-+|++.+....+ ++-|.+..+.+-++ +|.
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l-~p~ 63 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKL-FPE 63 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-CGG
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-Cch
Confidence 467889999999999 999999988876633 88888888888888 565
No 265
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=47.90 E-value=95 Score=24.04 Aligned_cols=78 Identities=18% Similarity=0.135 Sum_probs=49.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhC--cch-HHHHhhC---HHHHHHHHHHHHHhhCC-------CChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYI--SSA-TNIYNLF---PDDAVVQYTQACRIIGT-------SDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~n--ps~-~kA~e~l---y~dAa~~ye~Aw~l~~~-------~~~~vgykLA~~ylk~kr 87 (122)
|.-|.++||+..+.++ +.+.+ +.- ..=..++ |+..+...+.+|+.-.. ....-...+...| +.+=
T Consensus 17 LaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~~~~i~~y-r~ki 95 (260)
T 1o9d_A 17 LAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREY-RSKI 95 (260)
T ss_dssp HHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH-HHHH
T ss_pred HHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHHHHHHHHH-HHHH
Confidence 8889999999999999 98877 541 1111133 99999999999976310 0011222333333 3334
Q ss_pred HHHHHHHHHHHHH
Q psy16144 88 YAEAIDVSQTIMK 100 (122)
Q Consensus 88 ~~~AI~vc~kVL~ 100 (122)
-.+=..+|..||.
T Consensus 96 e~EL~~iC~dil~ 108 (260)
T 1o9d_A 96 ENELSKICDGILK 108 (260)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHH
Confidence 4555678888775
No 266
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=45.04 E-value=25 Score=22.46 Aligned_cols=38 Identities=11% Similarity=-0.128 Sum_probs=25.6
Q ss_pred hHHHHHHHH-HHhhCcchHHHHhhC--HHHHHHHHHHHHHhh
Q psy16144 29 WEPLSAGLR-KKQYISSATNIYNLF--PDDAVVQYTQACRII 67 (122)
Q Consensus 29 ~d~A~elL~-~l~~nps~~kA~e~l--y~dAa~~ye~Aw~l~ 67 (122)
.+.|.++++ +++.+.+ .+.-+-+ |.+|+..+..+++..
T Consensus 16 ~~~Ai~lv~~Ave~D~~-g~y~eAl~lY~~aie~l~~alk~e 56 (83)
T 2w2u_A 16 EEMARKYAINAVKADKE-GNAEEAITNYKKAIEVLAQLVSLY 56 (83)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHC
Confidence 467888888 8777664 3333322 778888888887773
No 267
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=44.94 E-value=17 Score=23.38 Aligned_cols=27 Identities=22% Similarity=0.241 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 75 HQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 75 gykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
-.++|.-|-..|+|+-|+..|+.|+.+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 467899999999999999999988854
No 268
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=44.48 E-value=38 Score=26.25 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=22.6
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN 47 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k 47 (122)
+.+..|.|++|.+.|+ ...-++|.-+
T Consensus 123 VCiek~~f~kA~eiLkr~~~~~~s~~k 149 (235)
T 3bu8_A 123 ICIKNKEFEKASKILKKHMSKDPTTQK 149 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHSTTCGGGHH
T ss_pred HHHHhcchHHHHHHHHHHhcCCCCchH
Confidence 8899999999999999 9887777554
No 269
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=43.85 E-value=35 Score=22.91 Aligned_cols=40 Identities=10% Similarity=-0.068 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHH-----HhcCCCChHHHHHHHH-HHhhCcchHHHHh
Q psy16144 8 TMQIIQTIAEWHFL-----LYLLPWRWEPLSAGLR-KKQYISSATNIYN 50 (122)
Q Consensus 8 ~~~~~~~~~~~~~L-----Lyi~~gk~d~A~elL~-~l~~nps~~kA~e 50 (122)
.|+||-.-.+.+-+ =..+.|+|++|.++++ + +.+..+|+.
T Consensus 8 ~m~iI~~aG~Ars~~~eAl~~Ak~g~fe~A~~~l~eA---~~~l~~AH~ 53 (103)
T 1wcr_A 8 VMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQS---RMALNEAHL 53 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHH---HHHHHHHHH
Confidence 48888777766665 5678999999999999 7 335566665
No 270
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=43.75 E-value=53 Score=25.77 Aligned_cols=48 Identities=19% Similarity=0.029 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhh------CCCChHHHHHHHHH-----HHhcccHHHHHHHHHHHHHh
Q psy16144 53 PDDAVVQYTQACRII------GTSDLALHQKLASL-----LLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~------~~~~~~vgykLA~~-----ylk~kr~~~AI~vc~kVL~~ 101 (122)
-+.|...|+.|.++. .|++| +...||-| |.-.+...+|+.+.+++++.
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThP-iRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDP-LYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCH-HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCh-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 467778899988765 35555 33444433 55689999999999999876
No 271
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=43.49 E-value=1.5e+02 Score=27.92 Aligned_cols=80 Identities=13% Similarity=-0.030 Sum_probs=59.3
Q ss_pred HhcCCCChHHHHHHHH-HHh-----hCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQ-----YISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMK 86 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~-----~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~k 86 (122)
-|++.|+.++|.++|+ .-+ ..|+ ...|.-+ .++|...|+.--+.+-.-|......|=..+.|.|
T Consensus 136 glcK~G~leeA~~Lf~eM~~m~~kG~~Pd-vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G 214 (1134)
T 3spa_A 136 CCLLTDQLPLAHHLLVVHHGQRQKRKLLT-LDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQD 214 (1134)
T ss_dssp HHHHHTCHHHHHHHHHHHHHSHHHHTTCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcCCCCC-HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCC
Confidence 7899999999999996 432 2444 5556533 9999999999988865556666666777889998
Q ss_pred cH-HHHHHHHHHHHHhC
Q psy16144 87 RY-AEAIDVSQTIMKAH 102 (122)
Q Consensus 87 r~-~~AI~vc~kVL~~~ 102 (122)
+. ++|..++++-.+..
T Consensus 215 ~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 215 QDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp CCHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHcC
Confidence 85 67778887766543
No 272
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=42.57 E-value=16 Score=32.68 Aligned_cols=36 Identities=19% Similarity=0.080 Sum_probs=30.9
Q ss_pred HHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy16144 63 ACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIM 99 (122)
Q Consensus 63 Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL 99 (122)
..... |.+|..-|-+|.+|+..|++.+|.++++++-
T Consensus 832 L~~~~-~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 832 LIGWL-NSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HGGGC-CSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHhhc-CCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44564 7789999999999999999999999998754
No 273
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=42.41 E-value=35 Score=22.98 Aligned_cols=39 Identities=5% Similarity=-0.133 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHH-----HhcCCCChHHHHHHHH-HHhhCcchHHHHh
Q psy16144 9 MQIIQTIAEWHFL-----LYLLPWRWEPLSAGLR-KKQYISSATNIYN 50 (122)
Q Consensus 9 ~~~~~~~~~~~~L-----Lyi~~gk~d~A~elL~-~l~~nps~~kA~e 50 (122)
|+||-.-.+.+-+ =..+.|+|++|.++++ + +.+..+|+.
T Consensus 11 m~iI~~aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA---~~~l~~AH~ 55 (105)
T 2e2a_A 11 FEIVAYAGDARSKLLEALKAAENGDFAKADSLVVEA---GSCIAEAHS 55 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHH---HHHHHHHHH
Confidence 8888777766665 5678999999999999 7 335666665
No 274
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=42.15 E-value=12 Score=30.33 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=28.1
Q ss_pred CCChHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 69 TSDLALHQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 69 ~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
.+-.++.--||.+||-.|++.+|++.|.+|+..
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 444566777899999999999999999999974
No 275
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=42.10 E-value=39 Score=24.17 Aligned_cols=75 Identities=13% Similarity=-0.046 Sum_probs=49.5
Q ss_pred HHHHHH-HHhhCcchHHHHh---hC---------HHHHHHHHHHHHHhhCCCChHH-HHHHHHHHHhcccHHHHHHHHHH
Q psy16144 32 LSAGLR-KKQYISSATNIYN---LF---------PDDAVVQYTQACRIIGTSDLAL-HQKLASLLLRMKRYAEAIDVSQT 97 (122)
Q Consensus 32 A~elL~-~l~~nps~~kA~e---~l---------y~dAa~~ye~Aw~l~~~~~~~v-gykLA~~ylk~kr~~~AI~vc~k 97 (122)
=..+|. |++.-.++..... |+ ..++...|+.....+=....+. .-.-|..+...|++.+|.+|++.
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~ 126 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYNSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQR 126 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTBSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHhcCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 345666 6665554444333 11 5567778887766543333443 44678889999999999999999
Q ss_pred HHHhCCCCHH
Q psy16144 98 IMKAHPSYPK 107 (122)
Q Consensus 98 VL~~~P~ypk 107 (122)
-++.+. .|.
T Consensus 127 Gi~~~A-~P~ 135 (152)
T 4a1g_A 127 GIQNQA-EPR 135 (152)
T ss_dssp HHHTTC-BSH
T ss_pred HHHcCC-ccH
Confidence 997654 553
No 276
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=41.83 E-value=34 Score=28.08 Aligned_cols=32 Identities=13% Similarity=0.148 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 72 LALHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 72 ~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
.++---||.+||-.+++.+|++.|.+|+..++
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~~~ 234 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAKDN 234 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 45666789999999999999999999998754
No 277
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=41.26 E-value=63 Score=27.00 Aligned_cols=63 Identities=14% Similarity=0.082 Sum_probs=50.5
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
|.--...++.|..+.. ++..+|+++.+|.-+ +-+|.-+|-+++--. +.++.+.-+|...+-+.
T Consensus 161 L~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~-~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 161 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVK-FPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSS-BCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcC-CCChhHHHHHHHHHHHH
Confidence 4444566899999999 999999999999944 777888888888774 55788888888777653
No 278
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=41.25 E-value=82 Score=22.96 Aligned_cols=64 Identities=8% Similarity=-0.075 Sum_probs=47.2
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR 87 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr 87 (122)
++...++.|.|.+.++ |++..+..++.|-.. .+.|...+.+|..++ |.+.. ....|--=++.|+
T Consensus 69 ~~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~-~k~~~-~le~a~~nl~~~~ 142 (161)
T 4h7y_A 69 ELKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERG-AVPLE-MLEIALRNLNLQK 142 (161)
T ss_dssp HHHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CBCHH-HHHHHHHHHHTTC
T ss_pred HHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccC-CCcHH-HHHHHHHhhhcCC
Confidence 4445589999999999 999888888888633 899999999999984 76443 4444444444443
No 279
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=38.54 E-value=62 Score=21.50 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=20.5
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy16144 77 KLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEK 115 (122)
Q Consensus 77 kLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~k 115 (122)
.+|-.++..|.++.|+..+-++++..| +|.---.|+++
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~-qP~~LL~i~q~ 62 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCG-QPQQLLQVLQQ 62 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHS-CHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHh
Confidence 345555555566666665555555666 45444444443
No 280
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=37.43 E-value=91 Score=25.02 Aligned_cols=49 Identities=18% Similarity=0.242 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhh-------CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 53 PDDAVVQYTQACRII-------GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~-------~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
|+.-+.-++.|..+. ..+-.++.--||.+||-.|++.+|++.|.+|+..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 444444455554442 3344556677899999999999999999999964
No 281
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=37.37 E-value=37 Score=24.84 Aligned_cols=59 Identities=15% Similarity=0.050 Sum_probs=36.8
Q ss_pred HHHHHhcCCCChHHHHHHHH-HHhhCcchHHHHhhC---------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhccc
Q psy16144 18 WHFLLYLLPWRWEPLSAGLR-KKQYISSATNIYNLF---------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKR 87 (122)
Q Consensus 18 ~~~LLyi~~gk~d~A~elL~-~l~~nps~~kA~e~l---------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr 87 (122)
..|-|.++.|+++.|.++.+ . +...-|..+ ++=|..+|+++=.++ +|-|.|.-.|+
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~---------~L~~Ly~~tg~ 75 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFD---------KLSFLYLVTGD 75 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH---------HHHHHHHHHTC
T ss_pred HHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH---------HHHHHHHHhCC
Confidence 34447888888888888777 4 334445433 666777777665543 45566666665
Q ss_pred HHH
Q psy16144 88 YAE 90 (122)
Q Consensus 88 ~~~ 90 (122)
-+.
T Consensus 76 ~e~ 78 (177)
T 3mkq_B 76 VNK 78 (177)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 282
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.24 E-value=94 Score=24.80 Aligned_cols=82 Identities=10% Similarity=0.013 Sum_probs=57.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHhhC------------HHHHHHHHHHHHHhhC-CCChHHHH----HHHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYNLF------------PDDAVVQYTQACRIIG-TSDLALHQ----KLASLLL 83 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e~l------------y~dAa~~ye~Aw~l~~-~~~~~vgy----kLA~~yl 83 (122)
.|.+.|+++.|.+.+. +...-.+...-.+.. |..|..++.+|-.+.. ..++..-- --|-.++
T Consensus 140 ~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l 219 (429)
T 4b4t_R 140 YYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCL 219 (429)
T ss_dssp HHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGG
T ss_pred HHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHH
Confidence 8889999999999999 877655533222211 8888889998866532 23344332 2355567
Q ss_pred hcccHHHHHHHHHHHHHhCC
Q psy16144 84 RMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 84 k~kr~~~AI~vc~kVL~~~P 103 (122)
-.++|.+|-..+..++....
T Consensus 220 ~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 220 AVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp GTSCHHHHHHHHHHHHHHSC
T ss_pred HhChHHHHHHHHHHHhccCC
Confidence 78999999999998886654
No 283
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=35.64 E-value=76 Score=24.09 Aligned_cols=73 Identities=11% Similarity=0.046 Sum_probs=50.0
Q ss_pred HHHHH-HHhhCcchHHHHh---hC---------HHHHHHHHHHHHHhhCCCChHH-HHHHHHHHHhcccHHHHHHHHHHH
Q psy16144 33 SAGLR-KKQYISSATNIYN---LF---------PDDAVVQYTQACRIIGTSDLAL-HQKLASLLLRMKRYAEAIDVSQTI 98 (122)
Q Consensus 33 ~elL~-~l~~nps~~kA~e---~l---------y~dAa~~ye~Aw~l~~~~~~~v-gykLA~~ylk~kr~~~AI~vc~kV 98 (122)
..+|. |++.-.++..+.. |+ -+++...|+.....+=....+. .-.-|..|...|+|.+|.+||+.-
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~G 176 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNYIDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKG 176 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTTCSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHccCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46777 8777666554443 11 4466677777766543444444 446788899999999999999999
Q ss_pred HHhCCCCH
Q psy16144 99 MKAHPSYP 106 (122)
Q Consensus 99 L~~~P~yp 106 (122)
++.+- .|
T Consensus 177 i~~~A-~P 183 (223)
T 4aez_C 177 KRMKA-KP 183 (223)
T ss_dssp HHHTC-BS
T ss_pred HHcCC-cc
Confidence 97765 45
No 284
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=34.99 E-value=32 Score=29.62 Aligned_cols=62 Identities=11% Similarity=-0.071 Sum_probs=38.7
Q ss_pred CCChHHHHHHHH-HHhhCcchHHHHhhC------HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHH
Q psy16144 26 PWRWEPLSAGLR-KKQYISSATNIYNLF------PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYA 89 (122)
Q Consensus 26 ~gk~d~A~elL~-~l~~nps~~kA~e~l------y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~ 89 (122)
+.|-+.|+.+.. +=. .++.+|.+|. |++|+..++++-.-.++.......++|.+|.-.|+|-
T Consensus 423 ~eKi~~AE~~~~k~e~--~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDyy 491 (526)
T 2wb7_A 423 QEKIDEAEQLLAKAKG--MNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDYY 491 (526)
T ss_dssp HHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhc--cCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHHH
Confidence 345588888777 511 2456777765 7777777666653333444445677888888777753
No 285
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=34.72 E-value=57 Score=22.57 Aligned_cols=41 Identities=7% Similarity=-0.049 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHHH-----HhcCCCChHHHHHHHH-HHhhCcchHHHHh
Q psy16144 7 DTMQIIQTIAEWHFL-----LYLLPWRWEPLSAGLR-KKQYISSATNIYN 50 (122)
Q Consensus 7 ~~~~~~~~~~~~~~L-----Lyi~~gk~d~A~elL~-~l~~nps~~kA~e 50 (122)
-.|+||-.-.+.+-+ =..+.|+|++|.++++ + +....+|+.
T Consensus 26 ~~m~II~~aG~ARS~~~eAl~~Ak~gdfe~A~~~l~eA---~e~l~~AH~ 72 (120)
T 3l8r_A 26 AAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEA---NDELLKAHQ 72 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH---HHHHHHHHH
Confidence 357777766666555 5668899999999999 7 335566665
No 286
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=34.61 E-value=65 Score=24.50 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=35.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHHHHh--hC---HHHHHHHHHHHHHhh
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATNIYN--LF---PDDAVVQYTQACRII 67 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~kA~e--~l---y~dAa~~ye~Aw~l~ 67 (122)
|.-|.++||+..+..+ +.+.++. .-.-| ++ |+..+...+.+|+.-
T Consensus 14 laeqaeRyddm~~~mk~v~~~~~e-Lt~EERnLLsvayKnvig~rR~swRii 64 (234)
T 2br9_A 14 LAEQAERYDEMVESMKKVAGMDVE-LTVEERNLLSVAYKNVIGARRASWRII 64 (234)
T ss_dssp HHHHHTCHHHHHHHHHHHHTTCSC-CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHhcccCC-CCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 8889999999999999 9887775 22222 22 999999999999763
No 287
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.44 E-value=51 Score=26.62 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhh-------CCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy16144 53 PDDAVVQYTQACRII-------GTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAH 102 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~-------~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~ 102 (122)
|+.-..-++.|..+. ..+-.++---||.+||-.|++.+|++.|.+|+...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 444445555555442 23334566678999999999999999999999753
No 288
>1no1_A G39P, replisome organizer, gene 39; helical, bipartite, natively unfolded domain, replication; 2.40A {Bacillus phage SPP1} SCOP: a.179.1.1
Probab=34.30 E-value=35 Score=23.89 Aligned_cols=84 Identities=19% Similarity=0.312 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHH-HHhhCc---chHHHHhhC---HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 13 QTIAEWHFLLYLLPWRWEPLSAGLR-KKQYIS---SATNIYNLF---PDDAVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 13 ~~~~~~~~LLyi~~gk~d~A~elL~-~l~~np---s~~kA~e~l---y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
.++.-||.+|- ...|+.+...++ -+.-|| +-+...... .+.+....+.+|.+-+
T Consensus 28 ~~ve~W~~lL~--d~~ye~v~~Al~~hI~~~~yPPsiadI~r~~~~i~~~~~p~~~E~~~~~~----------------- 88 (126)
T 1no1_A 28 GTVKAWHRVLA--EYELEEIMNNLTDYAKVNKFPPTVSDLLKAQSEQRDRFIPSYEETQRILK----------------- 88 (126)
T ss_dssp HHHHHHHHHHT--TSCHHHHHHHHHHHHHHCSSCCCGGGGCC--------------------------------------
T ss_pred HHHHHHHHHHh--cCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHH-----------------
Confidence 45666776654 577777777777 444443 211111111 3344455555555431
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Q psy16144 86 KRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMVHL 120 (122)
Q Consensus 86 kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~~l 120 (122)
+..++.+ +++-+|+|..-++..|++-+..|
T Consensus 89 -~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 118 (126)
T 1no1_A 89 -EQAEAEE----AARNDPDLQAAQEENMRKIREML 118 (126)
T ss_dssp -----------------------------------
T ss_pred -HHhHHHH----hhccCHHHHHHHHHHHHHHHHHh
Confidence 3334333 67788999888887877766544
No 289
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=34.24 E-value=1.6e+02 Score=25.13 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q psy16144 72 LALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMVH 119 (122)
Q Consensus 72 ~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~~ 119 (122)
...-.+.|......|+|.-|.+++..++..+|++..+|. ++-.|..+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~-l~a~~~~~ 495 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARE-LQADALEQ 495 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH-HHHHHHHH
Confidence 344566788888999999999999999999999999874 44444443
No 290
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=32.66 E-value=99 Score=23.61 Aligned_cols=45 Identities=20% Similarity=0.112 Sum_probs=35.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH-HHhhC---HHHHHHHHHHHHHh
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN-IYNLF---PDDAVVQYTQACRI 66 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k-A~e~l---y~dAa~~ye~Aw~l 66 (122)
|.-|.++||+..+..+ +.+.++.-.. =..++ |+..+...+.+|+.
T Consensus 17 laeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRi 66 (236)
T 3iqu_A 17 LAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRV 66 (236)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHH
Confidence 8889999999999999 9888875221 11123 99999999999986
No 291
>3iko_C Nucleoporin NUP84; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.20A {Saccharomyces cerevisiae} PDB: 3jro_C
Probab=32.34 E-value=40 Score=28.00 Aligned_cols=26 Identities=15% Similarity=0.096 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHH
Q psy16144 73 ALHQKLASLLLRMKRYAEAIDVSQTI 98 (122)
Q Consensus 73 ~vgykLA~~ylk~kr~~~AI~vc~kV 98 (122)
...++--|.+++.|+.++|++.|++.
T Consensus 178 ~~l~~~i~~liR~G~~~eA~~lc~~~ 203 (460)
T 3iko_C 178 HIFFKYIYELILAGAIDEALEEAKLS 203 (460)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHc
Confidence 45678889999999999999999964
No 292
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=32.32 E-value=84 Score=28.05 Aligned_cols=89 Identities=11% Similarity=0.054 Sum_probs=58.7
Q ss_pred CCCChHHHHHHHHHHhhCcchHHHHh---hC----HHHHHHHHHHHHHhhC--------------------CCCh--HHH
Q psy16144 25 LPWRWEPLSAGLRKKQYISSATNIYN---LF----PDDAVVQYTQACRIIG--------------------TSDL--ALH 75 (122)
Q Consensus 25 ~~gk~d~A~elL~~l~~nps~~kA~e---~l----y~dAa~~ye~Aw~l~~--------------------~~~~--~vg 75 (122)
..|.++-|.+++..+..||. ..... ++ +++|+.+|++|-.--. +... ...
T Consensus 822 ~~~~~~~a~eL~~~~~~t~~-~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY 900 (950)
T 4gq2_M 822 LFKQYNACMQLIGWLNSDPI-AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYY 900 (950)
T ss_dssp HTTCHHHHHHHGGGCCSSHH-HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHH
T ss_pred HhcHHHHHHHHHhhcCCChH-HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHH
Confidence 35677777776663344553 22111 22 8999999988752111 1111 134
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHH-hCCCCHHHHHHHHH
Q psy16144 76 QKLASLLLRMKRYAEAIDVSQTIMK-AHPSYPKVHKQIFE 114 (122)
Q Consensus 76 ykLA~~ylk~kr~~~AI~vc~kVL~-~~P~ypkir~~il~ 114 (122)
.+....+.+.|-|.-+|+.++.++. ..++.+....++.-
T Consensus 901 ~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~ 940 (950)
T 4gq2_M 901 LHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITH 940 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHH
Confidence 6788899999999999999999996 45688887776654
No 293
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=31.82 E-value=93 Score=23.97 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=36.0
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH-HHhhC---HHHHHHHHHHHHHh
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN-IYNLF---PDDAVVQYTQACRI 66 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k-A~e~l---y~dAa~~ye~Aw~l 66 (122)
|.-|.++||+..+..+ +.+.++.-.. =..++ |+..+...+.+|+.
T Consensus 13 laeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRi 62 (248)
T 3uzd_A 13 LAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRV 62 (248)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHH
Confidence 8889999999999999 9998875221 11122 99999999999996
No 294
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.79 E-value=51 Score=26.68 Aligned_cols=30 Identities=30% Similarity=0.241 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 72 LALHQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 72 ~~vgykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
.++---||.+||-.|++.+|++.|.+|+..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 356677899999999999999999999965
No 295
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=30.78 E-value=10 Score=30.66 Aligned_cols=38 Identities=11% Similarity=-0.023 Sum_probs=0.0
Q ss_pred ChHHHHHHHH-HHhhCcchHHHHhhC--HHHHHHHHHHHHHh
Q psy16144 28 RWEPLSAGLR-KKQYISSATNIYNLF--PDDAVVQYTQACRI 66 (122)
Q Consensus 28 k~d~A~elL~-~l~~nps~~kA~e~l--y~dAa~~ye~Aw~l 66 (122)
-.+.|.++++ +++.+.. .+.-+-+ |.+|+..|.++.+.
T Consensus 7 ~~~~A~~~~~~Av~~D~~-g~~~eA~~~Y~~a~~~l~~~~k~ 47 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKA-GNYEEALQLYQHAVQYFLHVVKY 47 (444)
T ss_dssp ------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 3568888888 8877654 3322222 66666666666665
No 296
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=30.45 E-value=1.1e+02 Score=25.42 Aligned_cols=47 Identities=15% Similarity=0.103 Sum_probs=33.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCc--c--------hHHHHhhC---------HHHHHHHHHHHHHh-hC
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYIS--S--------ATNIYNLF---------PDDAVVQYTQACRI-IG 68 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~np--s--------~~kA~e~l---------y~dAa~~ye~Aw~l-~~ 68 (122)
+|.+.|+...|..+++ .=..++ . -....+|+ |.+|..++..|++. +.
T Consensus 185 iYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 185 IYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCC
Confidence 9999999999999999 433222 1 11122222 99999999999998 73
No 297
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=30.35 E-value=1.1e+02 Score=19.61 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy16144 53 PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAM 117 (122)
Q Consensus 53 y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~ 117 (122)
.+.|+....+|.+..+..+-.-.+. -|.+||+.+.++++..| +|..+.-|-.|+.
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~---------~Y~~Aie~l~~alk~e~-~~~~k~~l~~K~~ 66 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALV---------CYQEGIDMLLQVLKGTK-ESSKRCVLRTKIS 66 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHH---------HHHHHHHHHHHHHHTCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHH---------HHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH
Confidence 4566777777776643333322222 25577888888887777 4666665665553
No 298
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=29.88 E-value=1.9e+02 Score=22.30 Aligned_cols=85 Identities=19% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHHH--HhcCCCChHHHHHHHH-HHhhC---cc-hHHHHhhC---HHHHHHHHHHHHHhh-------CCCChHHHHHH
Q psy16144 16 AEWHFL--LYLLPWRWEPLSAGLR-KKQYI---SS-ATNIYNLF---PDDAVVQYTQACRII-------GTSDLALHQKL 78 (122)
Q Consensus 16 ~~~~~L--Lyi~~gk~d~A~elL~-~l~~n---ps-~~kA~e~l---y~dAa~~ye~Aw~l~-------~~~~~~vgykL 78 (122)
.+...+ |.-|.++||+..+..+ +++.+ +. +..=..++ |+..+...+.+|..- ......-.-++
T Consensus 29 e~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~~~~ 108 (260)
T 2npm_A 29 ESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDASKM 108 (260)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHHHHH
Q ss_pred HHHHHhcccHHHHHHHHHHHHHh
Q psy16144 79 ASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 79 A~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
...| +.+=-.|=..+|..||.+
T Consensus 109 i~~y-r~kie~EL~~iC~dil~l 130 (260)
T 2npm_A 109 CGKY-RSKVEAELTDICNDILTM 130 (260)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHhhHHHH
No 299
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=28.78 E-value=2.1e+02 Score=22.39 Aligned_cols=79 Identities=20% Similarity=0.065 Sum_probs=0.0
Q ss_pred HHHHH------HhcCCCChHHHHHHHH--HH------hhCcchHHHHhhC------------------------------
Q psy16144 17 EWHFL------LYLLPWRWEPLSAGLR--KK------QYISSATNIYNLF------------------------------ 52 (122)
Q Consensus 17 ~~~~L------Lyi~~gk~d~A~elL~--~l------~~nps~~kA~e~l------------------------------ 52 (122)
|.|.+ =|+++++|++|.++|. ++ +.+-.+--+..++
T Consensus 31 EAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~ 110 (312)
T 2wpv_A 31 EAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEP 110 (312)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCc
Q ss_pred ----HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHH
Q psy16144 53 ----PDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVS 95 (122)
Q Consensus 53 ----y~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc 95 (122)
+-.++-.+-.--.-..-.+|....-+|..|.+.|++.+|...+
T Consensus 111 ~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 111 NLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp THHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHH
No 300
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=28.47 E-value=1.8e+02 Score=21.63 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=44.5
Q ss_pred HhcCCCChHHHHHHHH-HH---hhCcc-----hHHHHhhC---HHH----HHHHHHHHHHhhCCCChHHHHHHHHHHHhc
Q psy16144 22 LYLLPWRWEPLSAGLR-KK---QYISS-----ATNIYNLF---PDD----AVVQYTQACRIIGTSDLALHQKLASLLLRM 85 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l---~~nps-----~~kA~e~l---y~d----Aa~~ye~Aw~l~~~~~~~vgykLA~~ylk~ 85 (122)
+.+...+||+|.+++. += +-.++ +..+...+ .++ =+...-+.. +...++...-+.-..+.+.
T Consensus 27 v~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l--~~~~~~~~~r~~v~~L~rL 104 (235)
T 2d2s_A 27 IELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI--LSSNEIVHLKSGTENMIKL 104 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH--HTCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHC
Confidence 8888999999999998 43 32221 12222211 111 011122222 3345577777777888899
Q ss_pred ccHHHHHHHHHHH
Q psy16144 86 KRYAEAIDVSQTI 98 (122)
Q Consensus 86 kr~~~AI~vc~kV 98 (122)
|+..+|.++|-+.
T Consensus 105 g~~~~A~~lfL~~ 117 (235)
T 2d2s_A 105 GLPEQALDLFLQN 117 (235)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CChhHHHHHHHHH
Confidence 9999999887654
No 301
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=27.96 E-value=57 Score=26.78 Aligned_cols=39 Identities=23% Similarity=0.415 Sum_probs=28.9
Q ss_pred CChHHHHHHHHHHH------hcccHHHHHHHHHHHHH----hCCCCHHH
Q psy16144 70 SDLALHQKLASLLL------RMKRYAEAIDVSQTIMK----AHPSYPKV 108 (122)
Q Consensus 70 ~~~~vgykLA~~yl------k~kr~~~AI~vc~kVL~----~~P~ypki 108 (122)
+-.++.--||.+|| ..+++.+|++.|.+|+. +.|+|..+
T Consensus 186 tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~~~y~L~~~y~~~ 234 (499)
T 3jys_A 186 DQAVASALLARMYLNAEIYTGKARYTECINACNEVIKAGYQLADNYADL 234 (499)
T ss_dssp CHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHHTTCCCCSCTGGG
T ss_pred CHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHhcCCccchhHHHH
Confidence 33445666888888 57899999999999985 34555544
No 302
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=27.76 E-value=45 Score=25.42 Aligned_cols=26 Identities=4% Similarity=-0.150 Sum_probs=18.7
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcchHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISSATN 47 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps~~k 47 (122)
+.+..|.|++|.+.|+ ...-+++..+
T Consensus 126 VCiekg~Fk~A~eiLkr~f~~~~~~~~ 152 (211)
T 3bqo_A 126 VCMENGNFKEAEEVFERIFGDPNSHMP 152 (211)
T ss_dssp HHHHTTCHHHHHHHHHHHC-----CCT
T ss_pred HHHHccchHHHHHHHHHHhcCCCCchH
Confidence 8999999999999999 8887776544
No 303
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=27.74 E-value=57 Score=23.65 Aligned_cols=21 Identities=5% Similarity=-0.159 Sum_probs=17.1
Q ss_pred HhcCCCChHHHHHHHH-HHhhC
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYI 42 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~n 42 (122)
=+++.|+||+|.++++ .....
T Consensus 41 GLlql~~ydea~~yI~~~~~~~ 62 (192)
T 1ixm_A 41 GNLSLQKYDRVFEMIEEMVIDA 62 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHH
Confidence 5779999999999999 65433
No 304
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=27.61 E-value=56 Score=26.57 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 71 DLALHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 71 ~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
-..+---||.+||-.+++.+|++.+.+|+...+
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~~ 222 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKGYS 222 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 345666789999999999999999999997654
No 305
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.02 E-value=39 Score=27.11 Aligned_cols=30 Identities=7% Similarity=-0.042 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 74 LHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 74 vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
+-.+||..|.+.|++.+|++++.++...-.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~ 162 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAI 162 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcC
Confidence 567788888888888888888887776543
No 306
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=26.66 E-value=57 Score=22.51 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy16144 54 DDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKA 116 (122)
Q Consensus 54 ~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka 116 (122)
..|+..|.......+|.+..-.-+|=..-.+. -.+||.+|.+....-|+ ..+|.-|++-+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~el~~lIr~~ika--E~~AI~~Y~qLA~~AP~-ee~k~iI~eIr 71 (115)
T 2hz8_A 12 QQAIKIYKEVLKKAKEGDEQELARLIQEIVKA--EKQAVKVYKEAAEKARN-PEKRQVIDKIL 71 (115)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHTTTHHHHHHH--HHHHHHHHHHHHHSCCC-TTTTTTHHHHH
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCC-HHHHHHHHHHH
Confidence 46778888887776666777766766666776 66889999999988884 55665566543
No 307
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=25.85 E-value=67 Score=26.31 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=27.2
Q ss_pred CChHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy16144 70 SDLALHQKLASLLLRMKRYAEAIDVSQTIMKA 101 (122)
Q Consensus 70 ~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~ 101 (122)
+-.++---||.+||-.+++.+|++.|.+|+..
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33456677899999999999999999999964
No 308
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.49 E-value=2.7e+02 Score=22.26 Aligned_cols=94 Identities=13% Similarity=0.023 Sum_probs=54.9
Q ss_pred HhcCCCChHHHHHHHH-HHh-hCcchHHH-----Hh-----hC----HHHHHHHHHHHHH--hhCCCChH----HHHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQ-YISSATNI-----YN-----LF----PDDAVVQYTQACR--IIGTSDLA----LHQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~-~nps~~kA-----~e-----~l----y~dAa~~ye~Aw~--l~~~~~~~----vgykLA 79 (122)
+|-+.|++++|.++|. ... --.+..+. +. ++ |..|...+.++-. ++.+.+|. .-.-.|
T Consensus 146 i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~ 225 (445)
T 4b4t_P 146 IKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLV 225 (445)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHH
Confidence 8888899999988888 432 11111111 11 11 7888777777642 33344443 233456
Q ss_pred HHHHhcccHHHHHHHHHHHHHhCC--CCHHHHHHHHHH
Q psy16144 80 SLLLRMKRYAEAIDVSQTIMKAHP--SYPKVHKQIFEK 115 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kVL~~~P--~ypkir~~il~k 115 (122)
..++-.++|.+|-..|..++.... +.|.-+...|..
T Consensus 226 ~~~~~e~~y~~a~~~y~e~~~~~~~~~d~~~~~~~L~~ 263 (445)
T 4b4t_P 226 KISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSH 263 (445)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHhcccccCCHHHHHHHHHH
Confidence 677778888888888888876432 244444444443
No 309
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=24.31 E-value=50 Score=29.93 Aligned_cols=33 Identities=21% Similarity=0.124 Sum_probs=29.0
Q ss_pred HhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy16144 65 RIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTI 98 (122)
Q Consensus 65 ~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kV 98 (122)
... +.+|..-|-+|.+|+..|++.+|.++++++
T Consensus 836 ~~~-~~~~~~~yl~g~~~L~~ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 836 GWL-NSDPIAVYLKALIYLKSKEAVKAVRCFKTT 868 (1139)
T ss_dssp HHS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred hhc-cCCcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 343 778888999999999999999999999875
No 310
>2qeb_A D7R4 protein; all-helical, odorant-binding protein, ligand binding protein; 2.00A {Anopheles gambiae} PDB: 2pql_A 2qeh_A* 2qeo_A* 2qev_A
Probab=24.28 E-value=1.6e+02 Score=20.31 Aligned_cols=68 Identities=9% Similarity=-0.010 Sum_probs=41.5
Q ss_pred ChHHHHHHHH-HHhh---CcchHHHHhhCHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy16144 28 RWEPLSAGLR-KKQY---ISSATNIYNLFPDDAVVQYTQACRIIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 28 k~d~A~elL~-~l~~---nps~~kA~e~ly~dAa~~ye~Aw~l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL~~~P 103 (122)
..+++...++ |... .+.|.+|| ..|.-.++- .+.-.|+-||.|.....-. +.+...|
T Consensus 67 ~~~kv~~~l~kC~~~~~~~~~~~~A~--------~~ykC~~~~----k~~~~Fk~a~d~re~~~~~-------~~~~~~~ 127 (145)
T 2qeb_A 67 LDKRHDVNLEKCIGECVQVPTSERAH--------VFYKCLLKS----TTGRTFKKVFDLMELKKAG-------KVPQHQR 127 (145)
T ss_dssp CCHHHHHHHHHHHHHHHTSCGGGHHH--------HHHHHHHHS----TTHHHHHHHHHHHHHHHTT-------SSCTTCC
T ss_pred chHHHHHHHHhccCccCCCChhHhHH--------HHHhHHHcC----CchHHHHHHHhHHHHHhcc-------cCCCCCC
Confidence 3457888888 8753 45577777 344433322 3567778777775533311 3555678
Q ss_pred CCHHHHHHHHH
Q psy16144 104 SYPKVHKQIFE 114 (122)
Q Consensus 104 ~ypkir~~il~ 114 (122)
..++++..|.+
T Consensus 128 y~~~v~~~~~~ 138 (145)
T 2qeb_A 128 YTAEFVQIMKD 138 (145)
T ss_dssp SCHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 66888887754
No 311
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=24.06 E-value=3.3e+02 Score=23.10 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=65.5
Q ss_pred chhHHHHHHHHHHHHHHHhc--CCCChHHHHHHHH-HHhhCcchHH--HHhhCHHHHHHHHHHHHHhhCCCChHHHHHHH
Q psy16144 5 SVDTMQIIQTIAEWHFLLYL--LPWRWEPLSAGLR-KKQYISSATN--IYNLFPDDAVVQYTQACRIIGTSDLALHQKLA 79 (122)
Q Consensus 5 ~~~~~~~~~~~~~~~~LLyi--~~gk~d~A~elL~-~l~~nps~~k--A~e~ly~dAa~~ye~Aw~l~~~~~~~vgykLA 79 (122)
..|.+++++--.++.-+||- -..+|.+|.--|- +-+..|+..+ .. .+|.+|+..-+.- +.+. ..--..=||
T Consensus 235 ~tDs~el~~lQq~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp~~~-~Lf~~AI~~ar~~--Y~~~-hvYPYtYlg 310 (489)
T 4gq4_A 235 HTDSLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPL-TLYHKGIASAKTY--YRDE-HIYPYMYLA 310 (489)
T ss_dssp TEECHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSCCHH-HHHHHHHHHHHHH--STTC-CSHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHhccchhhcchhhhcccCHhhcCCCCCCCCHH-HHHHHHHHHHHHh--cccC-cccceeecc
Confidence 34555554433332222443 3478999999999 9888888544 11 1255555544422 2222 233344458
Q ss_pred HHHHhcccHHHHHHHHHHH---HHhCC---CCHHHHHHHHHHHHh
Q psy16144 80 SLLLRMKRYAEAIDVSQTI---MKAHP---SYPKVHKQIFEKAMV 118 (122)
Q Consensus 80 ~~ylk~kr~~~AI~vc~kV---L~~~P---~ypkir~~il~ka~~ 118 (122)
-.+.+.++|.+|+..+.+. +..+- +.-.|-+|.+|-|-.
T Consensus 311 G~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIane 355 (489)
T 4gq4_A 311 GYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAND 355 (489)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHT
T ss_pred hHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHH
Confidence 8889999999999988754 44333 335677777776643
No 312
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=22.75 E-value=3e+02 Score=22.13 Aligned_cols=82 Identities=10% Similarity=-0.016 Sum_probs=54.9
Q ss_pred HhcCCCChHHHHHHHH-HHhhCcc---hHHHHh--------hC----HHHHHHHHHHHHHhhCC--CChHH----HHHHH
Q psy16144 22 LYLLPWRWEPLSAGLR-KKQYISS---ATNIYN--------LF----PDDAVVQYTQACRIIGT--SDLAL----HQKLA 79 (122)
Q Consensus 22 Lyi~~gk~d~A~elL~-~l~~nps---~~kA~e--------~l----y~dAa~~ye~Aw~l~~~--~~~~v----gykLA 79 (122)
+|.+.|+|.+|.+++. .++.=+. ..--.| |. +..+-..|.+|....+. .+|.+ -.--|
T Consensus 108 l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~G 187 (394)
T 3txn_A 108 LYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSG 187 (394)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhh
Confidence 8999999999988888 6653222 111111 11 78888888888766432 34543 23336
Q ss_pred HHHH-hcccHHHHHHHHHHHHHhCC
Q psy16144 80 SLLL-RMKRYAEAIDVSQTIMKAHP 103 (122)
Q Consensus 80 ~~yl-k~kr~~~AI~vc~kVL~~~P 103 (122)
-.++ ..++|.+|-..+-++++.+.
T Consensus 188 i~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 188 ILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCHHHHHHHHHHHHhccc
Confidence 6778 89999999998888876554
No 313
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=22.67 E-value=1.3e+02 Score=22.73 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=31.9
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q psy16144 76 QKLASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHKQIFEKAMV 118 (122)
Q Consensus 76 ykLA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~~il~ka~~ 118 (122)
.-+|.....++||+|.+..-++|...+|+-..=....|..|+.
T Consensus 9 v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayK 51 (234)
T 2br9_A 9 VYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYK 51 (234)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence 3457778888999999999999998887655545556666554
No 314
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=20.90 E-value=1.6e+02 Score=22.47 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=28.0
Q ss_pred hhCCCChHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy16144 66 IIGTSDLALHQKLASLLLRMKRYAEAIDVSQTIM 99 (122)
Q Consensus 66 l~~~~~~~vgykLA~~ylk~kr~~~AI~vc~kVL 99 (122)
+++-+-.+.-|=-+-+|-|.|+|..|+.+..++|
T Consensus 56 L~~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 56 LHKLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHTCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556666666999999999999999999999
No 315
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=20.61 E-value=1.7e+02 Score=22.53 Aligned_cols=43 Identities=14% Similarity=0.241 Sum_probs=30.7
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHh
Q psy16144 76 QKLASLLLRMKRYAEAIDVSQTIMKAH--PSYPKVHKQIFEKAMV 118 (122)
Q Consensus 76 ykLA~~ylk~kr~~~AI~vc~kVL~~~--P~ypkir~~il~ka~~ 118 (122)
.-+|......+||+|.+..-.+|...+ |.-..=....|..|+.
T Consensus 12 v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYK 56 (260)
T 1o9d_A 12 VYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYK 56 (260)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHH
Confidence 346778888899999999999998877 6544444455555543
No 316
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=20.43 E-value=2e+02 Score=19.31 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=19.4
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCCCHHHHH
Q psy16144 78 LASLLLRMKRYAEAIDVSQTIMKAHPSYPKVHK 110 (122)
Q Consensus 78 LA~~ylk~kr~~~AI~vc~kVL~~~P~ypkir~ 110 (122)
=|--+-+.+.|.+|...+++|+.. .++|-|++
T Consensus 59 eak~~y~~~ny~ea~~l~~k~~n~-ten~~i~k 90 (106)
T 2vkj_A 59 EGKDLFETANYGEALVFFEKALNL-SDNEEIKK 90 (106)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-CCCHHHHH
T ss_pred HHHHHHHhcchhHHHHHHHHHHcc-ccCHHHHH
Confidence 344555666777777777777633 33666654
Done!