RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16151
(299 letters)
>d1qmva_ c.47.1.10 (A:) Thioredoxin peroxidase 2 (thioredoxin
peroxidase B, 2-cys peroxiredoxin) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 197
Score = 154 bits (389), Expect = 8e-47
Identities = 109/156 (69%), Positives = 129/156 (82%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
+ KPAP ++ TAVVDG KE+KLSDY GKY+V FFYPLDFTFVCPTEI+AF++R E+F +
Sbjct: 7 IGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRK 66
Query: 127 INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLR 186
+ EV+ SVDS FTHLAW+NTPRKEGGLG L IPLL+D+T ++S DYGV +D+G R
Sbjct: 67 LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYR 126
Query: 187 GLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAFH 222
GLFIID GVLRQIT+NDLPVGRSVDE LRLVQAF
Sbjct: 127 GLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162
>d1zyea1 c.47.1.10 (A:6-163) Peroxiredoxin-3 (AOP-1, SP-22) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 158
Score = 152 bits (385), Expect = 1e-46
Identities = 106/153 (69%), Positives = 127/153 (83%)
Query: 69 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN 128
+ AP+++GTAVV G+ KEI L D+ GKYLV FFYPLDFTFVCPTEI+AF+D+ EFH +N
Sbjct: 1 QHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVN 60
Query: 129 TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGL 188
EVVA SVDSHF+HLAW+NTPRK GGLG + I LLSDLT +IS DYGV L G LRGL
Sbjct: 61 CEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGL 120
Query: 189 FIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
FIID NGV++ +++NDLPVGRSV+ETLRLV+AF
Sbjct: 121 FIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 153
>d1uula_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Trypanosoma cruzi [TaxId: 5693]}
Length = 194
Score = 147 bits (372), Expect = 2e-44
Identities = 87/155 (56%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 69 KPAPFWQGTAVV-DGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQI 127
PAP + TA++ +G K++ L+ Y GK+LV FFYP+DFTFVCPTEI F+DR++EF I
Sbjct: 7 HPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI 66
Query: 128 NTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRG 187
EV+A S+DS ++HLAW + RK GGLG++ IP+L+D T I YGV + G RG
Sbjct: 67 GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRG 126
Query: 188 LFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAFH 222
LFIID LRQIT+NDLPVGR VDE LRLV+AF
Sbjct: 127 LFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 161
>d1e2ya_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Crithidia fasciculata [TaxId:
5656]}
Length = 167
Score = 133 bits (334), Expect = 4e-39
Identities = 81/156 (51%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
Query: 67 VSKPAPFWQGTAVV-DGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH 125
++ PAP + A++ +G K++ LS Y GKY+V FFYP+DFTFVCPTEI+ F+D + F
Sbjct: 5 LNHPAPEFDDMALMPNGTFKKVSLSSYKGKYVVLFFYPMDFTFVCPTEIIQFSDDAKRFA 64
Query: 126 QINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTL 185
+INTEV++ S DS ++HL W + RK+GGLG + IP+L+D T I+ YGV D G
Sbjct: 65 EINTEVISCSCDSEYSHLQWTSVDRKKGGLGPMAIPMLADKTKAIARAYGVLDEDSGVAY 124
Query: 186 RGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
RG+FIID NG LRQI +ND+P+GR+V+E +RLV+A
Sbjct: 125 RGVFIIDPNGKLRQIIINDMPIGRNVEEVIRLVEAL 160
>d2h01a1 c.47.1.10 (A:2-171) Thioredoxin peroxidase 2 (thioredoxin
peroxidase B, 2-cys peroxiredoxin) {Plasmodium yoelii
[TaxId: 5861]}
Length = 170
Score = 126 bits (316), Expect = 2e-36
Identities = 70/153 (45%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 71 APFWQGTAVV-DGQLKEIKLSDYYG-KYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN 128
AP ++ AV D E+ LSD+ G KY++ +FYPLDFTFVCP+EI+A + L+ F + N
Sbjct: 2 APSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN 61
Query: 129 TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGL 188
E++ SVDS FTHLAW TP +GG+G +K L+SD++ I+ Y V ++ LR
Sbjct: 62 VELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVL-FNESVALRAF 120
Query: 189 FIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
+ID+ GV++ + +N+L +GRSVDE LRL+ A
Sbjct: 121 VLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 153
>d1n8ja_ c.47.1.10 (A:) Alkyl hydroperoxide reductase AhpC
{Salmonella typhimurium [TaxId: 90371]}
Length = 186
Score = 126 bits (316), Expect = 3e-36
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 66 LVSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH 125
L++ ++ A +G+ E+ D G++ VFFFYP DFTFV PTE+ D EE
Sbjct: 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQ 61
Query: 126 QINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTL 185
++ +V + S D+HFTH AW + K+K ++ D T ++ ++ D+G
Sbjct: 62 KLGVDVYSVSTDTHFTHKAW---HSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLAD 118
Query: 186 RGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAFH 222
R F++D G+++ I + +GR + LR ++A
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155
>d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA
{Helicobacter pylori [TaxId: 210]}
Length = 170
Score = 125 bits (314), Expect = 5e-36
Identities = 69/159 (43%), Positives = 104/159 (65%), Gaps = 4/159 (2%)
Query: 66 LVSKPAPFWQGTAVVDGQ--LKEIKLSDYYGKY-LVFFFYPLDFTFVCPTEILAFNDRLE 122
+V+K AP ++ AV+ + +LS GK ++ FF+P DFTFVCPTEI+AF+ R++
Sbjct: 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVK 61
Query: 123 EFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQG 182
+FH+ V+ S+DS H AW NTP ++GG+G++ P+++D+T IS DY V +
Sbjct: 62 DFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAI 121
Query: 183 HTLRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
LRG F+ID+N +R +NDLP+GR+ DE LR+V A
Sbjct: 122 -ALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159
>d1we0a1 c.47.1.10 (A:1-166) Alkyl hydroperoxide reductase AhpC
{Amphibacillus xylanus [TaxId: 1449]}
Length = 166
Score = 120 bits (300), Expect = 6e-34
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 66 LVSKPAPFWQGTAVVDGQ-LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEF 124
L+ ++ A G+ E+ +D GK+ + FYP DF+FVCPTE+ E
Sbjct: 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAEL 61
Query: 125 HQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHT 184
++ EV + S D+HF H AW +G ++ ++ D + IS + V + G
Sbjct: 62 KKLGVEVYSVSTDTHFVHKAW---HENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLA 118
Query: 185 LRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
RG FIID +GV++ I +N +GR + V+A
Sbjct: 119 DRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId:
56636]}
Length = 237
Score = 114 bits (286), Expect = 3e-31
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 9/160 (5%)
Query: 66 LVSKPAPFWQGTAVVDGQLKEIKLSDYY---GKYLVFFFYPLDFTFVCPTEILAFNDRLE 122
L+ + P + V IKL D+Y GK+ V F +P DFT VC TE ++F R E
Sbjct: 2 LIGERFPEME----VTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYE 57
Query: 123 EFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQG 182
+F ++ +++ SVDS F+H+ W + G ++ P+++D ++ G+ ++
Sbjct: 58 DFQRLGVDLIGLSVDSVFSHIKWKEWIERHIG-VRIPFPIIADPQGTVARRLGLLHAESA 116
Query: 183 H-TLRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
T+RG+FI+D GV+R + + +GR VDE LR+V+A
Sbjct: 117 THTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 156
>d1xcca_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Plasmodium yoelii
yoelii [TaxId: 73239]}
Length = 219
Score = 109 bits (274), Expect = 2e-29
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 67 VSKPAP-FWQGTAVVDGQLKEIKLSDYY-GKYLVFFFYPLDFTFVCPTEILAFNDRLEEF 124
+ P F TA G + +L Y + + F +P DFT VC TE+ E+F
Sbjct: 4 LGATFPNF---TAKASGIDGDFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDF 60
Query: 125 HQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQ--- 181
++N +++ S +S +H W+ + G L K +IP++ D + +++ + +
Sbjct: 61 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDI 120
Query: 182 ---GHTLRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
T R LF I ++ + GR+ E LR++++
Sbjct: 121 TGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 163
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 220
Score = 107 bits (268), Expect = 1e-28
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 66 LVSKPAPFWQGTAVVDGQLKEIKLSDYYG-KYLVFFFYPLDFTFVCPTEILAFNDRLEEF 124
L+ AP ++ + I+ D+ G + + F +P DFT VC TE+ EF
Sbjct: 2 LLGDVAPNFEANT----TVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEF 57
Query: 125 HQINTEVVAASVDSHFTHLAWV---NTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQ 181
+ N +++A S+DS HLAW N E KL P++ D ++++ G+ +
Sbjct: 58 AKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAE 117
Query: 182 G------HTLRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAFH 222
T R +F+ + L+ + GR+ DE LR+V +
Sbjct: 118 KDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 164
>d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 169
Score = 95.5 bits (236), Expect = 9e-25
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 67 VSKPAPFWQGTAVVDGQ------------LKEIKLSDYYGKYLVFFFYPLDFTFVCPTEI 114
+ P +Q TA++ G I ++ GK+ V FF+P DFTFVCPTEI
Sbjct: 5 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEI 64
Query: 115 LAFNDRLEEFHQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDY 174
AF+ +EF + +++ S+DS F H W L P+LSD+ ++S
Sbjct: 65 AAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLK---TLPFPMLSDIKRELSQAA 121
Query: 175 GVYLSDQGHTLRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
GV +D G R FI+D N ++ ++ VGR+VDE LR++ A
Sbjct: 122 GVLNAD-GVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 167
>d1q98a_ c.47.1.10 (A:) Thiol peroxidase Tpx {Haemophilus influenzae
[TaxId: 727]}
Length = 164
Score = 71.4 bits (174), Expect = 9e-16
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 13/135 (9%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
V + + +V L ++ L+D+ K V +P T VC T + FN + +
Sbjct: 18 VGEIVENFI---LVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSN 74
Query: 127 INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQG---H 183
T V+ S D F + E H + GV +
Sbjct: 75 --TIVLCISADLPFAQARFCGAEGIENAKTVSTFR-----NHALHSQLGVDIQTGPLAGL 127
Query: 184 TLRGLFIIDRNGVLR 198
T R + ++D +
Sbjct: 128 TSRAVIVLDEQNNVL 142
>d2cx4a1 c.47.1.10 (A:4-163) Bacterioferritin comigratory protein
{Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 160
Score = 66.2 bits (160), Expect = 5e-14
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYY--GKYLVFFFYPLDFTFVCPTEILAFNDRLEEF 124
+ + AP + + + + + L + G+ V F+P F+ VC E+ F D++ +
Sbjct: 4 LGEKAPDFT---LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQL 60
Query: 125 HQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSD---- 180
+ N EV+A SVDS + + + +L LLSD ++ Y VY D
Sbjct: 61 EKANAEVLAISVDSPWCLKKFKDE-------NRLAFNLLSDYNREVIKLYNVYHEDLKGL 113
Query: 181 QGHTLRGLFIIDRNGVLRQITMNDLPVGR-SVDETLRLVQA 220
+ R +FI+ +G + + D P+ DE +R
Sbjct: 114 KMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANK 154
>d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 163
Score = 66.1 bits (160), Expect = 8e-14
Identities = 29/155 (18%), Positives = 58/155 (37%), Gaps = 11/155 (7%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
V A + + L + L+D+ GK V P T +C T+ FN+ L
Sbjct: 18 VGDKALDFS---LTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDN 74
Query: 127 INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLR 186
+ S+D F W EG + + H DY + +++ R
Sbjct: 75 TVV--LTVSMDLPFAQKRWC---GAEGLDNAIMLS--DYFDHSFGRDYALLINEWHLLAR 127
Query: 187 GLFIIDRNGVLRQITM-NDLPVGRSVDETLRLVQA 220
+F++D + +R + +++ + + + +A
Sbjct: 128 AVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162
>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 153
Score = 64.4 bits (155), Expect = 2e-13
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYG-KYLVFFFYPLDFTFVCPTEILAFNDRLEEFH 125
V AP + + D + + L Y G K ++ F+PL FT +C E+ D L EF
Sbjct: 4 VGATAPDFT---LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE 60
Query: 126 QINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLT--HKISLDYGVYLSDQGH 183
++ +A SV TH W PLLSD +S YGV+ G
Sbjct: 61 NDDSAALAISVGPPPTHKIWATQSG-------FTFPLLSDFWPHGAVSQAYGVFNEQAGI 113
Query: 184 TLRGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQA 220
RG F++DR+G++R M R + A
Sbjct: 114 ANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 150
>d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli
[TaxId: 562]}
Length = 164
Score = 63.7 bits (154), Expect = 5e-13
Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 14/155 (9%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
A + +V L ++ L + GK V +P T VC + FN E
Sbjct: 20 AGSKAQTFT---LVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDN 76
Query: 127 INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSD---QGH 183
+ S D F + I L + + YGV ++D +G
Sbjct: 77 TVVLCI--SADLPFAQSRFCGAEGLNN-----VITLSTFRNAEFLQAYGVAIADGPLKGL 129
Query: 184 TLRGLFIIDRNGVLRQI-TMNDLPVGRSVDETLRL 217
R + +ID N + ++++ + L +
Sbjct: 130 AARAVVVIDENDNVIFSQLVDEITTEPDYEAALAV 164
>d1hd2a_ c.47.1.10 (A:) Peroxiredoxin 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 161
Score = 62.3 bits (150), Expect = 1e-12
Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 12/161 (7%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYY-GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH 125
V P ++ L++ + GK V F P FT C L E
Sbjct: 5 VGDAIP--AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEAL 62
Query: 126 QINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTL 185
+ V A + A+V + K+ LL+D T + + L D ++
Sbjct: 63 KAKGVQVVAC---LSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSI 119
Query: 186 ------RGLFIIDRNGVLRQITMNDLPVGRSVDETLRLVQA 220
+ ++ ++G+++ + + G + ++
Sbjct: 120 FGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQ 160
>d1xvqa_ c.47.1.10 (A:) Thiol peroxidase Tpx {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 166
Score = 60.3 bits (145), Expect = 8e-12
Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 16/158 (10%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
V PAP + + G L I + GK ++ +P T VC T + F++R
Sbjct: 19 VGSPAPAFT---LTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAASGA 75
Query: 127 INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYL---SDQGH 183
V S D F + G G + S DYGV + G
Sbjct: 76 TVLCV---SKDLPFAQKRFC------GAEGTENVMPASAFRDSFGEDYGVTIADGPMAGL 126
Query: 184 TLRGLFIIDRNGVLRQI-TMNDLPVGRSVDETLRLVQA 220
R + +I +G + + ++ + + L + A
Sbjct: 127 LARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA 164
>d1nm3a2 c.47.1.10 (A:3-165) N-terminal, Prx domain of Hybrid-Prx5
{Haemophilus influenzae [TaxId: 727]}
Length = 163
Score = 58.7 bits (141), Expect = 3e-11
Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 7/150 (4%)
Query: 69 KPAPFWQGTAVVDGQLKEIKLSDYY-GKYLVFFFYPLDFTFVCPTEILAFNDRLEE---F 124
K P + ++ S+ + K ++ F P FT C + L + L
Sbjct: 5 KKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK 64
Query: 125 HQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHT 184
+ ++ +V + D+ + + + + T + + G G
Sbjct: 65 YGVDDILVVSVNDTFVMNAWKEDEKSEN---ISFIPDGNGEFTEGMGMLVGKEDLGFGKR 121
Query: 185 LRGLFIIDRNGVLRQITMNDLPVGRSVDET 214
++ +NGV+ ++ + G +
Sbjct: 122 SWRYSMLVKNGVVEKMFIEPNEPGDPFKVS 151
>d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 156
Score = 50.0 bits (118), Expect = 3e-08
Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 15/159 (9%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYG--KYLVFFFYPLDFTFVCPTEILAFNDRLEEF 124
+ P P +++ I L + +VFF YP T + F D +E
Sbjct: 7 IGDPIPDLS---LLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQEL 63
Query: 125 HQINTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHT 184
+ V + +K L LLSD + G + +
Sbjct: 64 KEYAA------VFGLSADSVT--SQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGS 115
Query: 185 LRGLFII-DRNGVLRQITMN-DLPVGRSVDETLRLVQAF 221
+R FI D +++ ++ ++ V + E L + + F
Sbjct: 116 IRSHFIFVDGKLKFKRVKISPEVSVNDAKKEVLEVAEKF 154
>d1tp9a1 c.47.1.10 (A:1-162) Plant peroxiredoxin {Western balsam
poplar(Populus trichocarpa) [TaxId: 3694]}
Length = 162
Score = 47.2 bits (111), Expect = 2e-07
Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Query: 81 DGQLKEIKLSDYY-GKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN--TEVVAASVD 137
QL+E+ + GK ++ F P FT C + + + TE++ SV+
Sbjct: 21 QDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN 80
Query: 138 SHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGLFIIDRNGVL 197
F AW + + + L + + R ++D + +
Sbjct: 81 DPFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKV 139
Query: 198 RQITMND 204
+ +
Sbjct: 140 KAANIEG 146
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 46.1 bits (108), Expect = 1e-06
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 242 QVTEKTCDILEDHGVTCELRGRTFIKGKGLITTYFI 277
QVTE+T IL+ G TC RG +KGKG + TYF+
Sbjct: 162 QVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFV 197
>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein
TlpA, soluble domain {Bradyrhizobium japonicum [TaxId:
375]}
Length = 176
Score = 45.4 bits (106), Expect = 2e-06
Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 69 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN 128
P DG K KLSD+ GK L+ + + C E+ A ++ + N
Sbjct: 34 LKLPDLAFEDA-DG--KPKKLSDFRGKTLLVNLWA-TWCVPCRKEMPALDELQGKLSGPN 89
Query: 129 TEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGL 188
EVVA ++D+ ++ +D K+ D G +
Sbjct: 90 FEVVAINIDTRDPEKPKTFLKEA----NLTRLGYFNDQKAKVFQDLKAIGRALG--MPTS 143
Query: 189 FIIDRNGVLRQITMNDLPVGRSVDETLRLVQA 220
++D G P + ++ L+L++A
Sbjct: 144 VLVDPQGCEIATIAG--PAEWASEDALKLIRA 173
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ),
soluble domain {Baker's yeast(Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 169
Score = 40.6 bits (93), Expect = 7e-05
Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 13/150 (8%)
Query: 85 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH-- 142
E + GK+ + +F + +CP E+ L + +
Sbjct: 17 NEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARD 76
Query: 143 -LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHT----------LRGLFII 191
A + + L + D Y VY S + +++
Sbjct: 77 SPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLM 136
Query: 192 DRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
D G + VD+ + V+++
Sbjct: 137 DPEGQFVDALGRNYDEKTGVDKIVEHVKSY 166
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ),
soluble domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 160
Score = 35.5 bits (80), Expect = 0.003
Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 13/150 (8%)
Query: 85 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTH-- 142
+ DY G++L+ +F VCP E+ ++E I T +
Sbjct: 11 ERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPER 70
Query: 143 --LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRG---------LFII 191
+ KE + + + +++ Y VY S +++I
Sbjct: 71 DTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLI 130
Query: 192 DRNGVLRQITMNDLPVGRSVDETLRLVQAF 221
+G + G ++ +
Sbjct: 131 GPDGEFLDYFGQNKRKGEIAASIATHMRPY 160
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 34.9 bits (79), Expect = 0.004
Identities = 13/122 (10%), Positives = 42/122 (34%), Gaps = 7/122 (5%)
Query: 85 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLA 144
+ + K + F+ + +C +E+ ++ + ++ +
Sbjct: 14 RPASVYLKKDKPTLIKFWA-SWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKK 72
Query: 145 WVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGLFIIDRNGVLRQITMND 204
+ + GL K+P+++D I+ + +I ++G +++I
Sbjct: 73 DGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNIS------VYPSWALIGKDGDVQRIVKGS 126
Query: 205 LP 206
+
Sbjct: 127 IN 128
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 34.5 bits (78), Expect = 0.006
Identities = 18/142 (12%), Positives = 43/142 (30%), Gaps = 14/142 (9%)
Query: 67 VSKPAPFWQG-TAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFH 125
+ +P P G A ++G + + K + F+ + C A E
Sbjct: 3 LRQPMPELTGEKAWLNG--EVTREQLIGEKPTLIHFW----SISCHLCKEAMPQVNEFRD 56
Query: 126 QINTEVVAASVDSHFTH-LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHT 184
+ ++ +V + ++ + P+ D H ++ +
Sbjct: 57 KYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENE------Y 110
Query: 185 LRGLFIIDRNGVLRQITMNDLP 206
+ ++ D+ G LR
Sbjct: 111 VPAYYVFDKTGQLRHFQAGGSG 132
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 32.5 bits (73), Expect = 0.022
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 69 KPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN 128
K P+ T V+ G +I L GK + F+F + + N
Sbjct: 5 KFFPY--STNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKN 62
Query: 129 TEVVAASVDSH 139
EV+ S D
Sbjct: 63 FEVMLISWDES 73
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 134
Score = 32.3 bits (72), Expect = 0.030
Identities = 22/136 (16%), Positives = 31/136 (22%), Gaps = 17/136 (12%)
Query: 85 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLA 144
+ GK V +F+ T CP + A
Sbjct: 15 APFDGASLQGKPAVLWFW----TPWCPFCNAEAPSLSQVAAANPAVT-----FVGIATRA 65
Query: 145 WVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGLFIIDRNGVLRQITMND 204
V + L L+D I Y V +G + N+
Sbjct: 66 DVGAMQSFVSKYNLNFTNLNDADGVIWARYNVP------WQPAFVFYRADGTSTFV--NN 117
Query: 205 LPVGRSVDETLRLVQA 220
S DE V A
Sbjct: 118 PTAAMSQDELSGRVAA 133
>d1xzoa1 c.47.1.10 (A:3-174) Thioredoxin-like protein Sco1 (YpmQ),
soluble domain {Bacillus subtilis [TaxId: 1423]}
Length = 172
Score = 31.5 bits (70), Expect = 0.079
Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 14/129 (10%)
Query: 85 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEE--FHQINTEVVAASVDSHFTH 142
K + L G+ + F + +CP D ++ I+ +++ SVD
Sbjct: 22 KNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 81
Query: 143 LAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYL-----------SDQGHTLRGLFII 191
+ L L+ + ++ + H +++
Sbjct: 82 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQ-SSFYLV 140
Query: 192 DRNGVLRQI 200
+G + +
Sbjct: 141 GPDGKVLKD 149
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 144
Score = 31.1 bits (69), Expect = 0.080
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
++K P G + + E+ L GK + +F + +
Sbjct: 4 LAKYLP---GATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA 60
Query: 127 INTEVVAASVDSH 139
N EVV S D +
Sbjct: 61 KNFEVVLISWDEN 73
>d2nlua1 b.34.9.2 (A:1-100) Hepatoma-derived growth factor, HDGF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 29.9 bits (67), Expect = 0.10
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 72 PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQIN 128
P W E + KY VFFF + F+ P ++ + + E+F + N
Sbjct: 24 PHWPARIDEM---PEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPN 77
>d1xiya1 c.47.1.10 (A:2-180) 1-Cys peroxiredoxin {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 179
Score = 30.4 bits (68), Expect = 0.15
Identities = 9/86 (10%), Positives = 27/86 (31%), Gaps = 4/86 (4%)
Query: 64 FKLVSKPAPFWQGTAVVDGQLKEIKLSDYY-GKYLVFFFYPLDFTFVCPTEILAFNDRLE 122
+ + T I + + K ++ P FT C T+++ +
Sbjct: 11 VMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEY 70
Query: 123 EFHQ---INTEVVAASVDSHFTHLAW 145
++ ++ + + + +W
Sbjct: 71 DYFIKENNFDDIYCITNNDIYVLKSW 96
>d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase NSD3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 97
Score = 29.2 bits (65), Expect = 0.19
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 72 PFWQGTAVVDGQLKE--IKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
+W + L G + VFFF D+ +V + + + + F +
Sbjct: 16 RWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAE 72
>d1o8xa_ c.47.1.10 (A:) Tryparedoxin I {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 28.9 bits (63), Expect = 0.41
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 13/129 (10%)
Query: 67 VSKPAPFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQ 126
+ K P G + E+++ GK + F+F +
Sbjct: 2 LDKYLP---GIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES 58
Query: 127 INTEVVAASVDSHFTHLAWVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLR 186
N EVV + D A + S+ K+S + V ++
Sbjct: 59 KNFEVVFCTWDEEEDGFAGYFAKMPWLAV----PFAQSEAVQKLSKHFNVE------SIP 108
Query: 187 GLFIIDRNG 195
L +D +
Sbjct: 109 TLIGVDADS 117
>d1ey1a_ a.79.1.1 (A:) Antitermination factor NusB {Escherichia coli
[TaxId: 562]}
Length = 139
Score = 26.2 bits (57), Expect = 3.2
Identities = 8/45 (17%), Positives = 20/45 (44%)
Query: 189 FIIDRNGVLRQITMNDLPVGRSVDETLRLVQAFHDPLRTGAINGL 233
+ R + +D+P +++E + L ++F +NG+
Sbjct: 82 KAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGV 126
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole
carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}
Length = 155
Score = 26.0 bits (57), Expect = 3.9
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 243 VTEKTCDILEDHGVTCELR 261
+ CDIL++ + E +
Sbjct: 16 TMKYACDILDELNIPYEKK 34
>d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 134
Score = 25.8 bits (55), Expect = 4.1
Identities = 11/117 (9%), Positives = 24/117 (20%), Gaps = 14/117 (11%)
Query: 85 KEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEVVAASVDSHFTHLA 144
+ GK V +F+ Q+ +
Sbjct: 16 HDFHGESLLGKPAVLWFWAPWCPTCQGEAP--------VVGQVAASHPEVTFVGVAGLDQ 67
Query: 145 WVNTPRKEGGLGKLKIPLLSDLTHKISLDYGVYLSDQGHTLRGLFIIDRNGVLRQIT 201
L+D + ++GV +D +G + +
Sbjct: 68 VPAMQEFVNKYPVKTFTQLADTDGSVWANFGVT------QQPAYAFVDPHGNVDVVR 118
>d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 137
Score = 25.8 bits (56), Expect = 4.4
Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 72 PFWQGTAVVDGQLKEIKLSDYYGKYLVFFFYPLDFTFVCPTEILAFNDRLEEFHQINTEV 131
+W +V K G V +F F+ + +++A + F+
Sbjct: 23 SWWPA--MVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVALGLFSQHFNLATFNK 80
Query: 132 VAASVDSHF 140
+ + + +
Sbjct: 81 LVSYRKAMY 89
>d1eyva_ a.79.1.1 (A:) Antitermination factor NusB {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 131
Score = 25.5 bits (55), Expect = 5.4
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 166 LTHKISLDYGVYLSDQGHTLRGLFIIDRNGVLR----QITMNDLPVGRSVDETLRLVQAF 221
H +D + +G TL L +DR + + D+P VDE ++L +
Sbjct: 55 SEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKEL 114
Query: 222 HDPLRTGAINGL 233
G +NG+
Sbjct: 115 STDDSPGFVNGV 126
>d1tzva_ a.79.1.1 (A:) Antitermination factor NusB {Thermotoga
maritima [TaxId: 2336]}
Length = 141
Score = 24.8 bits (53), Expect = 8.8
Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 162 LLSDLTHKISLDYGVYLSDQGHTLRGLFIIDRNGVLR----QITMNDLPVGRSVDETLRL 217
+ + +D + + +L L ++DRN + + D+P+ ++DE + +
Sbjct: 51 IRGIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEI 110
Query: 218 VQAFHDPLRTGAINGL 233
+ + +NG+
Sbjct: 111 AKRYGTENSGKFVNGI 126
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.143 0.434
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,147,062
Number of extensions: 54460
Number of successful extensions: 202
Number of sequences better than 10.0: 1
Number of HSP's gapped: 180
Number of HSP's successfully gapped: 45
Length of query: 299
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 214
Effective length of database: 1,240,546
Effective search space: 265476844
Effective search space used: 265476844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 53 (24.8 bits)