BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16152
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86SQ9|DHDDS_HUMAN Dehydrodolichyl diphosphate synthase OS=Homo sapiens GN=DHDDS PE=1
SV=3
Length = 333
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 186/284 (65%), Gaps = 9/284 (3%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
D++ L DKCLYT SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 181 SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQY---------DFYTNEMWRADKSKSLTSAGEAFVNE 275
A+ FQ D Y E R + + E + E
Sbjct: 241 FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLRE 284
>sp|Q99KU1|DHDDS_MOUSE Dehydrodolichyl diphosphate synthase OS=Mus musculus GN=Dhdds PE=2
SV=1
Length = 333
Score = 280 bits (717), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 184/284 (64%), Gaps = 9/284 (3%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G VPKHIAFIMDGNRRYAK+ + EGH++GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GL+DLAR KF L+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L DKCLY+ SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 181 SDVSESLLDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQ---------YDFYTNEMWRADKSKSLTSAGEAFVNE 275
A+ FQ D Y E R + + E + E
Sbjct: 241 CEAILQFQRNHGALQKARDMYAEERKRRQLERDQAAVTEQLLRE 284
>sp|O14171|YE54_SCHPO Uncharacterized protein C4D7.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4D7.04c PE=3 SV=2
Length = 264
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 156/242 (64%), Gaps = 1/242 (0%)
Query: 8 TLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLD 67
TL+ + +I +K+G VP+HIAF+MDGNRR+A++ +TIEGHS GF+ L L+ CL
Sbjct: 17 TLDQLETMMINTIKRGKVPQHIAFVMDGNRRWARQRRMETIEGHSSGFEALKSLLKVCLK 76
Query: 68 LGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELL 127
LGV+EV+ + FSIENFKR++ EV+ LM++A+ ++ D +++ GIRIRI+G++ L
Sbjct: 77 LGVKEVSAFTFSIENFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRL 136
Query: 128 PSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDL 187
D++ + +A+ ITK NT+ LNV F YTSR E+ + + ++ IT ED+ D+
Sbjct: 137 QPDVLETALKAVEITKHNTKATLNVCFPYTSRHEIATSVQSIVKMAEDGTITPEDIDEDI 196
Query: 188 FDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQS-KSSFLYFCHKLWPEFTAWNLINAVFA 246
F+K L S DL+IRTSG RLSDFML Q K++ + F WP+F+ W +
Sbjct: 197 FEKNLLIKDSLPLDLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQ 256
Query: 247 FQ 248
+Q
Sbjct: 257 YQ 258
>sp|O26334|UPPS_METTH Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific)
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=uppS PE=3 SV=1
Length = 255
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 152/238 (63%), Gaps = 2/238 (0%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAK-RSNAKTIEGHSKGFDKLAETLQWCLDLGV 70
+++ I + L++ +P+H+A IMDGNRRY+K + + IEGH KG + L + L WC+DLG+
Sbjct: 11 YEWYISRNLRRDRMPRHVAIIMDGNRRYSKLQGSMNPIEGHKKGIETLEKVLDWCVDLGI 70
Query: 71 REVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSD 130
VT YAFS ENFKR E+EV GLM L R F+ I +K+++ +R+R +G +ELLP D
Sbjct: 71 EIVTAYAFSTENFKRPEKEVKGLMKLFRENFE-AIASNEKIHKNRVRVRAVGKLELLPED 129
Query: 131 LIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDK 190
+ + + A T+ ++ +N+A Y R E+V+ +R + + ++ I ED+ D+ ++
Sbjct: 130 VRRAIEIAEKSTEQYSDRLVNIAIGYDGRQEIVDATRKIAEDVKAGLIDPEDIDEDMINR 189
Query: 191 CLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
LYT +P LIIRTSGE RLS F+L QS S LYFC LWPE + + A+ ++Q
Sbjct: 190 NLYTAGLEDPHLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQ 247
>sp|Q8TXA7|UPPS_METKA Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=uppS PE=3 SV=1
Length = 271
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 1/229 (0%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
+K+G VP+H+ IMDGNRR+A+ + EGH G DKL + L+WCLDLGV+ VTVYA S
Sbjct: 36 VKEGRVPEHVGIIMDGNRRFARELGLEPWEGHRYGADKLEDVLEWCLDLGVKAVTVYALS 95
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
EN R +EE+ L DL +FK L E ++++ + + +R +G + LLP+ + + K+A
Sbjct: 96 TENLNRPKEELKRLFDLMEERFKALAE-SERIHRRKVAVRAVGRLHLLPTRVRRAIKKAE 154
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPE 199
TK+ + FLNVA +Y R E+++ R + ++ ++ +++ F K +Y G P+
Sbjct: 155 RATKEYKDRFLNVAVAYGGRQEIIDAVREIAHDVKVGRLDPDEIDEGTFRKYVYVGDLPD 214
Query: 200 PDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
P+LIIRTSGE RLS+F+L S S LYF WPEF +L+ A+ FQ
Sbjct: 215 PELIIRTSGEERLSNFLLWYSAYSELYFVDVYWPEFRKIDLLRAIREFQ 263
>sp|Q8U0I8|UPPS_PYRFU Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=uppS PE=3 SV=1
Length = 264
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 152/239 (63%), Gaps = 1/239 (0%)
Query: 10 NWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLG 69
+ ++ +++ +K G +PKH+A IMDGNRR+A++ GH G KL E ++WC +LG
Sbjct: 19 DLYERYLLEKVKAGVIPKHVAIIMDGNRRWARKREKPPWYGHFFGSKKLEEIVEWCHELG 78
Query: 70 VREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPS 129
+R +TVYAFS ENFKR++EEV+ LM L KF+ L+ ++ +++E GIR+ ++G ELLP
Sbjct: 79 IRILTVYAFSTENFKRSKEEVDRLMKLFEEKFRELVTDR-RVHEYGIRVNVMGRKELLPK 137
Query: 130 DLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFD 189
++ + +EA +T+ FLN+A +Y R E+V+ + +++ + ++ ED+ ++
Sbjct: 138 NVREAAEEAERVTRKYNNYFLNIALAYGGRSEIVDAIKDIVNDVLEGRLKLEDINEEIVR 197
Query: 190 KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
K LY P+PD++IRT GE R+S+F+L Q S L+F +PEF + + + FQ
Sbjct: 198 KYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQ 256
>sp|Q9V157|UPPS_PYRAB Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
abyssi (strain GE5 / Orsay) GN=uppS PE=3 SV=1
Length = 264
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 147/239 (61%), Gaps = 1/239 (0%)
Query: 10 NWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLG 69
+ ++ +++ +K G +PKH+A IMDGNRR+AK+ GH G KL E L+WC +LG
Sbjct: 19 DLYERYLLEKVKAGVLPKHVAIIMDGNRRWAKKREKPPWYGHLFGSKKLEEILEWCHELG 78
Query: 70 VREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPS 129
+R +TVYAFS ENFKR++EEV LM L KF+ L+ +K +++E G+R+ +IG ELLP
Sbjct: 79 IRILTVYAFSTENFKRSKEEVERLMQLFEQKFRELVTDK-RVHEYGVRVNVIGRKELLPK 137
Query: 130 DLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFD 189
+ + +EA T+ LNVA +Y R E+V+ + ++ + K+ ED+ +L
Sbjct: 138 SVRDAAEEAERATRKYNNYVLNVAIAYGGRSEIVDAVKDIVRDVMDGKLRVEDIDEELLK 197
Query: 190 KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
K LY P+PD++IRT GE R+S+F+L Q S L+F +PEF + + + FQ
Sbjct: 198 KYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQ 256
>sp|O59258|UPPS_PYRHO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=uppS PE=3 SV=1
Length = 264
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 148/239 (61%), Gaps = 1/239 (0%)
Query: 10 NWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLG 69
+ ++ +I+ +K G +PKH+A IMDGNRR+A++ GH G KL E L+WC +LG
Sbjct: 19 DLYERYLIEKVKSGVLPKHVAIIMDGNRRWARKHEKPPWYGHLFGSKKLEEILEWCHELG 78
Query: 70 VREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPS 129
+R +TVYAFS ENFKR++EEV+ LM L KF+ L+ +K +++E G+R+ +IG ELLP
Sbjct: 79 IRILTVYAFSTENFKRSKEEVDRLMKLFEEKFRELVTDK-RVHEYGVRVNVIGRKELLPK 137
Query: 130 DLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFD 189
+ + +EA T+ LNVA +Y R E+V+ + + + + K+ E++ +L
Sbjct: 138 SVRDAVEEAERATRKYNNYILNVALAYGGRSEIVDAVKDIARDVISGKLRIEEIDEELLR 197
Query: 190 KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+ LY P+PD++IRT GE R+S+F+L Q S L+F +PEF + + + FQ
Sbjct: 198 RYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQ 256
>sp|Q8RA26|ISPT_THETN Isoprenyl transferase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=uppS PE=3
SV=1
Length = 247
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 148/233 (63%), Gaps = 3/233 (1%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+IK L K +P+H+ IMDGN R+A++ + GH G + + E ++ C +LG++ +T+
Sbjct: 9 LIKKLDKTRLPQHVGIIMDGNGRWAQKRGMPRVYGHKAGVNAVREVIRSCRELGIKYLTL 68
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFS EN+KR +EEV+ LMDL + L +E D+LN+ + ++ IG+I LP
Sbjct: 69 YAFSTENWKRPKEEVDFLMDLL---VEYLSKEVDELNKNNVVVKFIGDISRLPEKCQIEI 125
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
++A +T+ NT +N+A +Y RDE+V+ ++ + + +++ ED+T D + LYT
Sbjct: 126 EKAQKLTEKNTGLVVNIALNYGGRDEIVKATQNICKKVLNRELSPEDITEDTITQHLYTA 185
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+ P+PDLIIRTSGE RLS+F+L QS S L+F LWP+F +LI A+ +Q
Sbjct: 186 SQPDPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFKKRHLIEALLYYQ 238
>sp|Q5JGE1|UPPS_PYRKO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=uppS PE=3 SV=1
Length = 264
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVR 71
++ +++ +K G++PKH+A IMDGNRR+A++ GH G KL E L+WC +L +R
Sbjct: 21 YESYLLEKVKSGNIPKHVAIIMDGNRRWARKLEKPPWYGHLFGSKKLEEILEWCRELNIR 80
Query: 72 EVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDL 131
+TVYAFS ENFKR++EEV LM+L KFK L+++ ++++ GIR+ ++G ++LP ++
Sbjct: 81 TLTVYAFSTENFKRSKEEVEALMNLFEEKFKELVQD-ERVHRYGIRVNVLGRKDMLPENV 139
Query: 132 IASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKC 191
+ +EA T+ + LN+A +Y R E+ + R ++ + KI ED+ + +
Sbjct: 140 RKAAEEAERATRKYSNYNLNIALAYGGRSEIADAVREIVRDVLEGKIKPEDIDEEAIKRY 199
Query: 192 LYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
LY P+PD++IRT GE R+S+F+L Q S L+F +PEF + + + FQ
Sbjct: 200 LYYPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQ 256
>sp|O29049|UPPS_ARCFU Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=uppS PE=3 SV=1
Length = 251
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 153/239 (64%), Gaps = 2/239 (0%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVR 71
++ +++ ++KG +P HIA IMDGNRR+A++ + EGH G K E L+WC DLGV+
Sbjct: 7 YENKLLRSVRKGAIPHHIAIIMDGNRRFARKKGLEPHEGHFFGSKKAEEVLEWCWDLGVK 66
Query: 72 EVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDL 131
+T+YAFS ENF+R+E+E + L ++ +RL++++ + E+ +R++++G ELLP +L
Sbjct: 67 MLTLYAFSTENFRRSEKEKKNIFQLLESELRRLLKDR-RTYERELRVKVVGKRELLPENL 125
Query: 132 IASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKC 191
+ KE TK + +LNVA +Y R E+++ R ++ +R ++ E++ + ++
Sbjct: 126 RETIKEVEERTKKHRRHYLNVAVAYGGRQEIIDAVRAILRKVRKGEVRPEEIDEKMLEEH 185
Query: 192 LY-TGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
LY G + DLIIRT GE RLS+F+ Q+ +S YFC WPEF +L+ A+ A+QY
Sbjct: 186 LYGEGRYSKVDLIIRTGGEQRLSNFLPWQAANSVAYFCDVYWPEFRKIDLLRAIRAWQY 244
>sp|Q58767|UPPS_METJA Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific)
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=uppS PE=3
SV=1
Length = 280
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 3/244 (1%)
Query: 7 STLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCL 66
L ++ + + + K ++PKH+A IMDGNRR A+ GH G +K+ E L+W
Sbjct: 30 GVLKIYEKILEEAIDKDNLPKHVAIIMDGNRRAAEIYGKDRYYGHYLGAEKVREVLRWAR 89
Query: 67 DLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIEL 126
DLG+ VT+YAFS ENF+R +EEV+ LM+L KF I + ++++ +R+R IG I L
Sbjct: 90 DLGINVVTLYAFSTENFRRPKEEVDKLMELFEKKFYE-IADDEEIHRYEVRVRAIGRINL 148
Query: 127 LPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMD 186
LP ++ + K A TK+ + F+N+A +Y + E+++ + + + ++ +I ED+ +
Sbjct: 149 LPKNVQKAIKYAEERTKNYNKFFVNIAIAYGGQQEIIDAVKKIAEKVKRGEIEPEDIDKE 208
Query: 187 LFDKCLYTGTS--PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
L DK LYT P PDLIIRTSGE R+S+F++ QS S LYFC WP F + + AV
Sbjct: 209 LIDKHLYTANLPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAV 268
Query: 245 FAFQ 248
+Q
Sbjct: 269 RDYQ 272
>sp|Q9HKQ0|UPPS_THEAC Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=uppS PE=3 SV=1
Length = 258
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 149/241 (61%), Gaps = 9/241 (3%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVR 71
++ +++ +KK P+HI I DGNRRYA+ EGH KG +K+ E + WC++L +R
Sbjct: 15 YENVLLEEVKKYPRPRHIGIITDGNRRYARNVGISENEGHVKGKEKVEEVVDWCMELDIR 74
Query: 72 EVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDL 131
VT YAFS ENF+R+ EEV+ L L FK L+++ +++ + I +++IGN+ +LP
Sbjct: 75 IVTFYAFSTENFRRSPEEVDFLFHLIDNAFKSLLKD-ERVYKNRINVKVIGNLSILP--- 130
Query: 132 IASFKEAMHITKDNTEGF----LNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDL 187
A ++ +HI ++ T+ F LN+A Y R+E+++ + + K+ +++ +
Sbjct: 131 -AYLRQTIHIVEETTKNFNNYQLNLAIGYGGREEILDAIKRITRDAMDGKLNIDELDEEK 189
Query: 188 FDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
F LY G P+PDLI+RTSGE R+S+F+L QS S LYF WPEF+ + + A++++
Sbjct: 190 FRMYLYDGRIPDPDLILRTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSY 249
Query: 248 Q 248
Q
Sbjct: 250 Q 250
>sp|Q8S2T1|DDPS6_ARATH Dehydrodolichyl diphosphate synthase 6 OS=Arabidopsis thaliana
GN=At2g17570 PE=2 SV=2
Length = 295
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 151/268 (56%), Gaps = 20/268 (7%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MS +++ + + ++ +++ G +P HIAFIMDGNRRYAK+ GH GF L
Sbjct: 15 MSQLLEQIYGFSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMS 74
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
LQ+C +LG++ VT+YAFSI+NF+R EEV +MDL K K L+E++ +++ GIR+
Sbjct: 75 MLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYF 134
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILI----DGLRTN 176
IGN+ LL + A+ ++ M T N+ L + +Y S DE+V+ + D + +
Sbjct: 135 IGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEAS 194
Query: 177 KITNEDVTMDL----------------FDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQS 220
+ED D+ ++ + +P PD++IR+SGETRLS+F+L Q+
Sbjct: 195 NYKHEDSDSDIEGTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQT 254
Query: 221 KSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
++ L LWPE +L+ A+ FQ
Sbjct: 255 GNTQLCSPAALWPEIGLRHLLWAILNFQ 282
>sp|Q8XJQ9|ISPT_CLOPE Isoprenyl transferase OS=Clostridium perfringens (strain 13 / Type
A) GN=uppS PE=3 SV=1
Length = 253
Score = 175 bits (444), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 139/230 (60%), Gaps = 3/230 (1%)
Query: 19 LLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAF 78
+L + +PKHIA IMDGN R+AK+ GH G + ++ C LGV+ +T+YAF
Sbjct: 17 VLIEDKMPKHIAIIMDGNGRWAKKRGLPRTMGHRAGVKTIKTIVKECDKLGVKYLTLYAF 76
Query: 79 SIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
S EN+KR E+EVN LM L K E D+L++ G+R++ IG++ P + + A
Sbjct: 77 STENWKRPEDEVNALMKLVVEFIK---NEIDELHQNGVRVQTIGDLSRFPEEPKKAILWA 133
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP 198
M TKDNT L++A +Y R+E+V + +I+ ++ KI+ +D+ D+F+ LYT P
Sbjct: 134 MEKTKDNTGVVLSLALNYGGRNEIVRGIKSVIEDVKAGKISIDDINEDMFNDYLYTKGMP 193
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+PDLIIR SGE RLS+F+L Q S ++ WP+F +L A+F +Q
Sbjct: 194 DPDLIIRPSGEQRLSNFLLWQCAYSEFWYSQINWPDFNGEDLRKAIFDYQ 243
>sp|Q97B58|UPPS_THEVO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=uppS PE=3 SV=1
Length = 258
Score = 174 bits (441), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 149/242 (61%), Gaps = 11/242 (4%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVR 71
++ +++ +KK P+H+ I DGNRRYA+ EGH KG +K+ E L WC++L ++
Sbjct: 15 YEDVLMEEVKKYPRPRHVGIITDGNRRYARIVGIPENEGHVKGKNKVEEVLDWCMELDIK 74
Query: 72 EVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDL 131
VT YAFS ENFKR+ EEV+ L L F L+++ +++ + I +++IGN+ +LP L
Sbjct: 75 IVTFYAFSTENFKRSPEEVDFLFHLINDAFISLLKD-ERVYKNKINVKVIGNVSMLPEYL 133
Query: 132 IASFKEAMHITKDNTEGF----LNVAFSYTSRDEMVET-SRILIDGLRTNKITNEDVTMD 186
+E + IT++ T+ F +N+A Y R+E+++ RI D + KI +++
Sbjct: 134 ----RETIKITEETTKNFSNYHMNLAIGYGGREEILDAIKRIARDAI-AGKINVDEIDES 188
Query: 187 LFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFA 246
F LY G P+PDLI+RTSGE R+S+F+L QS S LYF WPEF+ + + A+++
Sbjct: 189 KFRNYLYDGNLPDPDLILRTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYS 248
Query: 247 FQ 248
+Q
Sbjct: 249 YQ 250
>sp|O87197|ISPT_THET2 Isoprenyl transferase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=uppS PE=3 SV=1
Length = 263
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 148/251 (58%), Gaps = 8/251 (3%)
Query: 4 VVDSTLNW-FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETL 62
+ L W ++ +++ +K+G +P+H+ I+DGNRRYA+ +GH G K E L
Sbjct: 7 ALSRPLYWLYEQRLLREVKRGPMPRHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVL 66
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
+WCL++G++ VTV+ FS +NFKR EEV LM+L + +R+ E+ ++ E +R+R IG
Sbjct: 67 EWCLEMGIKTVTVWVFSTDNFKRPPEEVETLMNLFLREAERMAED-HRILEHQVRVRFIG 125
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVE-TSRILID----GLRTNK 177
E +++ + + T+ + FLN+A Y R+E+V+ R+L++ GL +
Sbjct: 126 RREGFSPEVVRAIERLERRTEGHRGMFLNIALGYGGREEIVDAVKRLLLEAEARGLSPKE 185
Query: 178 ITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTA 237
+ E +T + + LYT P+PD IIRTSGE RLS F+L QS S YF LWPEF
Sbjct: 186 VA-EGLTPEDIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
Query: 238 WNLINAVFAFQ 248
+ + A+ ++Q
Sbjct: 245 IDFLRALRSYQ 255
>sp|Q81WL2|ISPT_BACAN Isoprenyl transferase OS=Bacillus anthracis GN=uppS PE=3 SV=1
Length = 258
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 144/234 (61%), Gaps = 3/234 (1%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+++ +KKG++P+HIA IMDGN R+AKR I GH +G + + ++ L V+ +T+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFS EN+KR ++EV+ LM L + E L E+ +++R+IG + LP+ +
Sbjct: 80 YAFSTENWKRPKKEVDYLMQLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAM 136
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
++AM TK+NT LN A +Y SRDE+V + ++ K+ EDV+ ++ L T
Sbjct: 137 EKAMEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTS 196
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+ P+P+L+IRTSGE R+S+FML Q S +F WP+FT +L+NA+ FQ+
Sbjct: 197 SLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQH 250
>sp|Q5SH15|ISPT_THET8 Isoprenyl transferase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=uppS PE=3 SV=1
Length = 263
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 148/251 (58%), Gaps = 8/251 (3%)
Query: 4 VVDSTLNW-FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETL 62
+ L W ++ +++ +K+G +P+H+ I+DGNRRYA+ +GH G K E L
Sbjct: 7 ALSRPLYWLYEKRLLREVKRGPMPRHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVL 66
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
+WCL++G++ VTV+ FS +NFKR EEV LM+L + +R+ E+ ++ E +R+R IG
Sbjct: 67 EWCLEMGIKTVTVWVFSTDNFKRPPEEVETLMNLFLREAERMAED-HRILEHQVRVRFIG 125
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVE-TSRILID----GLRTNK 177
E +++ + + T+ + FLN+A Y R+E+V+ R+L++ GL +
Sbjct: 126 RREGFSPEVVRAIERLERRTEGHRGMFLNIAMGYGGREEIVDAVKRLLLEAEARGLSPKE 185
Query: 178 ITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTA 237
+ E +T + + LYT P+PD IIRTSGE RLS F+L QS S YF LWPEF
Sbjct: 186 VA-EGLTPEDIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
Query: 238 WNLINAVFAFQ 248
+ + A+ ++Q
Sbjct: 245 IDFLRALRSYQ 255
>sp|Q6HEZ2|ISPT_BACHK Isoprenyl transferase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=uppS PE=3 SV=1
Length = 258
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 144/234 (61%), Gaps = 3/234 (1%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+++ +KKG++P+HIA IMDGN R+AKR I GH +G + + ++ L V+ +T+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFS EN+KR ++EV+ LM L + E L E+ +++R+IG + LP+ +
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAM 136
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
++AM TK+NT LN A +Y SRDE+V + ++ K+ EDV+ ++ L T
Sbjct: 137 EKAMEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTS 196
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+ P+P+L+IRTSGE R+S+FML Q S +F WP+FT +L+NA+ FQ+
Sbjct: 197 SLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQH 250
>sp|Q732P6|ISPT_BACC1 Isoprenyl transferase OS=Bacillus cereus (strain ATCC 10987)
GN=uppS PE=3 SV=1
Length = 258
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 144/234 (61%), Gaps = 3/234 (1%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+++ +KKG++P+HIA IMDGN R+AKR I GH +G + + ++ L V+ +T+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFS EN+KR ++EV+ LM L + E L E+ +++R+IG + LP+ +
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAM 136
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
++AM TK+NT LN A +Y SRDE+V + ++ K+ EDV+ ++ L T
Sbjct: 137 EKAMEETKENTGLILNFALNYGSRDEIVSAVQHMMKDREEGKVRVEDVSEEMLSSYLMTS 196
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+ P+P+L+IRTSGE R+S+FML Q S +F WP+FT +L+NA+ FQ+
Sbjct: 197 SLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQH 250
>sp|Q6KZ89|UPPS_PICTO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Picrophilus
torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 /
NBRC 100828) GN=uppS PE=3 SV=1
Length = 255
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 139/237 (58%), Gaps = 1/237 (0%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVR 71
++ +++ +KK VP H+ I DGNRRYA+ EGH KG +KL E L W +++G+
Sbjct: 12 YESKLLEEIKKHPVPGHLGIITDGNRRYARSIGISENEGHVKGKEKLEEVLNWSMEVGIH 71
Query: 72 EVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDL 131
VTVYAFS ENFKR +EVN L +L F L+ + +++ + GIR+++IG+I LP L
Sbjct: 72 MVTVYAFSTENFKRKSDEVNFLFNLINDAFIDLLND-ERVYKNGIRVKVIGDISKLPDYL 130
Query: 132 IASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKC 191
+ K T N+A Y R E+++ + + + KI +++ ++F
Sbjct: 131 KETIKRVEGETNKFKNFRFNLAIGYGGRQEIIDAIKKIGQDILNGKIKVDNINEEMFRSY 190
Query: 192 LYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
LY T P+PDLI+RTSGE R+S+F+L QS S LYF WPE + + A++++Q
Sbjct: 191 LYDKTLPDPDLILRTSGEERISNFLLWQSAYSELYFADVNWPELRKIDFLRAIYSYQ 247
>sp|Q819Y1|ISPT_BACCR Isoprenyl transferase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=uppS PE=3 SV=1
Length = 258
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 144/234 (61%), Gaps = 3/234 (1%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+++ +KKG++P+HIA IMDGN R+AKR I GH +G + + ++ L V+ +T+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFS EN+KR ++EV+ LM L + E L E+ +++R+IG + LP+ +
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQKDRLPTHTRRAM 136
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
++AM TK+NT LN A +Y SRDE+V + ++ KI +E+V+ ++ L T
Sbjct: 137 EKAMEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTS 196
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+ P+P+L+IRTSGE R+S+FML Q S +F WP+F +L+NA+ FQ+
Sbjct: 197 SLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQH 250
>sp|Q9ZEJ7|ISPT_ANAVT Isoprenyl transferase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=uppS PE=3 SV=2
Length = 249
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 138/230 (60%), Gaps = 5/230 (2%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
LK+ +PKH+A IMDGN R+AKR I GH +G D L + L+ C D G++ +T YAFS
Sbjct: 15 LKRELLPKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFS 74
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLI-EEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
EN+KR +EEV LM L F+R++ +E ++ E+ ++I+ +GN+ LP L A +
Sbjct: 75 TENWKRPQEEVEFLMTL----FQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRS 130
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP 198
M TK+N +VA +Y R E+++ R + ++ + +++ ++F++ LYT
Sbjct: 131 MEATKNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTAGIA 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+PDL+IRTSGE RLS+F+L Q +Y LWP+F A+ A+Q
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQ 240
>sp|Q8GDY3|ISPT_HELMO Isoprenyl transferase OS=Heliobacillus mobilis GN=uppS PE=3 SV=1
Length = 260
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 131/236 (55%), Gaps = 3/236 (1%)
Query: 13 QYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVRE 72
+ A+ + + +PKHIA IMDGN R+AKR + GH G + L L+ C D +
Sbjct: 17 EQALSEQIDPHRIPKHIAIIMDGNGRWAKRRGLPRVAGHRAGVESLRRVLEVCEDYNIAY 76
Query: 73 VTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLI 132
+TVYAFS EN+KR +EVN L DL R E + L+ KG+RIR IG IE LP
Sbjct: 77 LTVYAFSTENWKRPADEVNALFDLLVEYLHR---ELNTLHSKGVRIRAIGKIEDLPGGPR 133
Query: 133 ASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCL 192
++A+ T +NT LNVA +Y R E+VE + + K+ + + + L
Sbjct: 134 RELEKAIAKTANNTRLVLNVALNYGGRFEIVEAVKSIARLAAEGKVNPDQIDEKYMSQYL 193
Query: 193 YTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
YT P+PDL+IR SGE RLS+F+L QS + ++ LWP+F ++ A+ +Q
Sbjct: 194 YTADVPDPDLLIRPSGELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMVQAIVDYQ 249
>sp|P58563|ISPT1_NOSS1 Isoprenyl transferase 1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=uppS1 PE=3 SV=1
Length = 249
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 138/230 (60%), Gaps = 5/230 (2%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
LK+ +PKH+A IMDGN R+AKR I GH +G D L + L+ C D G++ +T YAFS
Sbjct: 15 LKRELLPKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFS 74
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLI-EEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
EN+KR +EEV LM L F+R++ +E ++ E+ ++I+ +GN+ LP L A +
Sbjct: 75 TENWKRPQEEVEFLMTL----FQRVLRQELREMVEENVQIQFVGNLTALPRSLQAEISRS 130
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP 198
M TK+N +VA +Y R E+++ R + ++ + +++ ++F++ LYT
Sbjct: 131 MEETKNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEINEEVFERHLYTAGIS 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+PDL+IRTSGE RLS+F+L Q +Y LWP+F A+ A+Q
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQ 240
>sp|Q8LAR7|DDPS8_ARATH Dehydrodolichyl diphosphate synthase 8 OS=Arabidopsis thaliana
GN=At5g60510 PE=2 SV=2
Length = 272
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 146/248 (58%), Gaps = 5/248 (2%)
Query: 4 VVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIE-GHSKGFDKLAETL 62
+ ++ ++ + I K+L+ G +P +I+FIMDGNRR+AK+ N + ++ GH GF + L
Sbjct: 14 IFNALMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYIL 73
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
Q+C ++GV VT+YAF ++NFKR EEV +MDL K + I++ N G+RI G
Sbjct: 74 QYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAG 133
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNED 182
++ L A+ K+ M +T++N + + V +Y++ E+V R +R +K +
Sbjct: 134 DLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVR--DSCVRKSKTGDGS 191
Query: 183 VTMDLFD--KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
++L D +C+YT P PDL++RT G RLS+FM Q+ + L+ LWPE W+L
Sbjct: 192 SALELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHL 251
Query: 241 INAVFAFQ 248
+ A+ FQ
Sbjct: 252 VWAILKFQ 259
>sp|Q8PZ76|UPPS_METMA Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=uppS PE=3 SV=2
Length = 298
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 137/229 (59%), Gaps = 6/229 (2%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P+HIA IMDGNRRYA + I GH+ G + + ++WC ++GV+++T+YAFS ENF+
Sbjct: 26 IPEHIAVIMDGNRRYAGQLGKARIFGHAMGAEVTEQVIEWCYEIGVKQLTLYAFSTENFQ 85
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R+EEEV GL +L KF +L +K + EK +++R+IG+ LP+ L S T+
Sbjct: 86 RSEEEVGGLFNLINEKFLKLHTDK-RTYEKEMQVRVIGDRTKLPAYLNESIDRIEKATEH 144
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTS---PEPD 201
+ + LNVA +Y R ++++ R + + + K++ EDV L K LY P D
Sbjct: 145 HRKFSLNVAIAYGGRQDIMQAVRDIATCVSSGKLSLEDVNESLISKHLYPAPGVPVPNVD 204
Query: 202 LIIRTSGETRLSDFMLVQSKSS--FLYFCHKLWPEFTAWNLINAVFAFQ 248
LIIRT G+ R+S+F+ Q+ S YFC WPEF +L+ +V +Q
Sbjct: 205 LIIRTGGDERISNFLPWQANGSECATYFCAPFWPEFRKIDLLRSVRVYQ 253
>sp|Q8TJQ7|UPPS_METAC Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=uppS PE=3 SV=1
Length = 298
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 147/252 (58%), Gaps = 10/252 (3%)
Query: 6 DSTLNWFQYAIIKLLKK----GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAET 61
+ T + F +LL+K +P HIA IMDGNRRYA + GH+ G + +
Sbjct: 3 NRTFSMFYQEYEQLLEKEILSSEIPDHIAVIMDGNRRYAGQRGRTRSFGHAMGAEVTEQV 62
Query: 62 LQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRII 121
++WC ++GV+E+T+YAFS ENF+R+EEEV+GL +L KF +L +K + EK +IR+I
Sbjct: 63 IEWCYEIGVKELTLYAFSTENFQRSEEEVDGLFNLINEKFLKLYNDK-RTYEKETQIRVI 121
Query: 122 GNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNE 181
G+ LP+ L S ++ T+ + + LNVA +Y R ++++ R + + + K++ E
Sbjct: 122 GDRTKLPAFLNKSIEKIEKATETHRKFNLNVAIAYGGRQDIMQAVRDIAACVSSGKLSLE 181
Query: 182 DVTMDLFDKCLYTGTS---PEPDLIIRTSGETRLSDFMLVQSKSS--FLYFCHKLWPEFT 236
DV +L K LY P DLI+RT G+ R+S+F+ Q+ S YFC WPEF
Sbjct: 182 DVDENLISKHLYPAPGVSVPNVDLIVRTGGDERVSNFLPWQANGSECATYFCAPFWPEFR 241
Query: 237 AWNLINAVFAFQ 248
+L+ ++ +Q
Sbjct: 242 KIDLLRSIRVYQ 253
>sp|Q97I62|ISPT_CLOAB Isoprenyl transferase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=uppS PE=3 SV=1
Length = 257
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 136/228 (59%), Gaps = 6/228 (2%)
Query: 24 HVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENF 83
++PKHIA IMDGN R+AK+ N GH G + L ++ C D+GV+ +TVY FS EN+
Sbjct: 23 NIPKHIAIIMDGNGRWAKKRNLPRTMGHKAGGEALKRIVRECSDIGVKYLTVYGFSTENW 82
Query: 84 KRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
R +EEVN +M L KR E ++LN+ + I IGNI LP I + +A + TK
Sbjct: 83 IRPKEEVNAIMRLIVEFLKR---EFNELNKNNVIINPIGNILGLPEACITALNDAKNKTK 139
Query: 144 DNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDV---TMDLFDKCLYTGTSPEP 200
+NT LN+A +Y RDE++ + + NKI+ +++ + + F LYTG P+P
Sbjct: 140 NNTGLMLNLALNYGGRDEILNAVKNIFASYEENKISKDEIFNLSDEEFSSYLYTGCIPDP 199
Query: 201 DLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
D+IIR SGE RLS+F+L Q S ++ + WP+F+ +L A+ +Q
Sbjct: 200 DIIIRPSGEKRLSNFLLWQCAYSEFWYSNINWPDFSIEDLHTAIKDYQ 247
>sp|Q9KA67|ISPT_BACHD Isoprenyl transferase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=uppS PE=3
SV=1
Length = 256
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 137/229 (59%), Gaps = 3/229 (1%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L + +PKH+A IMDGN R+AK+ I GH +G + + ++ +DL + +++YAFS
Sbjct: 22 LDESAIPKHVAIIMDGNGRWAKKKGLPRIAGHREGMKVINKIVRKAIDLKIEVLSLYAFS 81
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
EN+KR EV+ L+ L +F +L E L E+ +++RI+G ++ LP + +AM
Sbjct: 82 TENWKRPRTEVDYLLKLPE-RFLKL--ELPNLMEENVQVRIMGGLDTLPEHTAKAVTKAM 138
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPE 199
TKDNT LN A +Y SR EMVE + + + T ++++ +T D+ + L T +
Sbjct: 139 EETKDNTGLILNFALNYGSRYEMVEAMKQVAKEVETGTLSSDAITEDVISRHLMTADLRD 198
Query: 200 PDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
PDL+IRTSGE RLS+FML Q S +F LWP+FT +L A+ +Q
Sbjct: 199 PDLLIRTSGEIRLSNFMLWQLAYSEFWFTDVLWPDFTEHHLTEAIAVYQ 247
>sp|Q8LED0|DDPS7_ARATH Dehydrodolichyl diphosphate synthase 7 OS=Arabidopsis thaliana
GN=At5g60500 PE=2 SV=1
Length = 271
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 145/250 (58%), Gaps = 9/250 (3%)
Query: 4 VVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIE-GHSKGFDKLAETL 62
+ ++ ++ + + ++L G +P +I+FIMDGNRR+AK+ N ++ GH GF + L
Sbjct: 13 IFNALMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYIL 72
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
Q+C ++GV VT++AF ++NFKR EEV +MDL K + I++ N G+RI G
Sbjct: 73 QYCKEIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAG 132
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNED 182
+++ L A+ K+ M +T++N + + V +Y++ E+V R K TN D
Sbjct: 133 DLDSLNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSC----VRKCTNGD 188
Query: 183 --VTMDLFD--KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAW 238
V ++L D +C+YT P PDL+IRT G RLS+FM Q+ S L+ LWPE W
Sbjct: 189 DLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLW 248
Query: 239 NLINAVFAFQ 248
+L+ A+ FQ
Sbjct: 249 HLVWAILKFQ 258
>sp|Q8A1E0|ISPT_BACTN Isoprenyl transferase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=uppS
PE=3 SV=1
Length = 244
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 132/232 (56%), Gaps = 5/232 (2%)
Query: 17 IKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVY 76
I+ + K +P+HIA IMDGN R+AK+ + GH G + + + ++ LGV+ +T+Y
Sbjct: 4 IEKIDKNRIPQHIAIIMDGNGRWAKQRGKERTYGHQAGAETVHKIIEDAARLGVKYLTLY 63
Query: 77 AFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFK 136
FS EN+ R +EEV LM+L E++ L + IR RIIG+I+ LP+++
Sbjct: 64 TFSTENWNRPQEEVAALMNLLVDSI-----EEETLMKNNIRFRIIGDIKKLPAEVQEGLS 118
Query: 137 EAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGT 196
+ T +NT L +A SY+SR EM E R + +T +I+ E +T + L T
Sbjct: 119 RCIEHTANNTGTCLVLALSYSSRWEMTEAVRQIATLAKTGEISPEQITDEYITAHLTTNF 178
Query: 197 SPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
P+PDL+IRT GE RLS+++L Q S LYFC WP+F A++ +Q
Sbjct: 179 MPDPDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQ 230
>sp|Q98MB9|ISPT_RHILO Isoprenyl transferase OS=Rhizobium loti (strain MAFF303099) GN=uppS
PE=3 SV=1
Length = 244
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 130/222 (58%), Gaps = 3/222 (1%)
Query: 26 PKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKR 85
P H+A IMDGN R+AK + GH G + L +T++ DLG+ +TVYAFS EN+ R
Sbjct: 4 PAHVAIIMDGNGRWAKARGMPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENWSR 63
Query: 86 TEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKDN 145
+ EV+ LM L + +R + E L++ G+R+RIIG+ L +D+ +EA +T N
Sbjct: 64 PKAEVSDLMGLLKLFIRRDLAE---LHQSGVRVRIIGDRAGLQADIRGLLEEAESLTARN 120
Query: 146 TEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIR 205
L +AF+Y RDE+V T+R L +I E +T D F L T P+P+L+IR
Sbjct: 121 ESLTLVIAFNYGGRDEIVRTARKLASAAARGEIDAESITADSFAGGLDTQGIPDPELVIR 180
Query: 206 TSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
TSGE RLS+F+L Q+ S L F WP+F+ +L A+ F
Sbjct: 181 TSGELRLSNFLLWQAAYSELVFLPCYWPDFSREHLAEALREF 222
>sp|Q9HXY2|UPPS_PSEAE Ditrans,polycis-undecaprenyl-diphosphate synthase
((2E,6E)-farnesyl-diphosphate specific) OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=uppS PE=3 SV=1
Length = 251
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 3/211 (1%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
VP+H+A IMDGN R+AK+ + GH G D + ++ C + GV +T++AFS EN++
Sbjct: 10 VPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQ 69
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R +EV+ LM+L +R E KL+E GIR+RIIG+ +L A+ +EA T
Sbjct: 70 RPADEVSALMELFLVALRR---EVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAG 126
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
NT L VA +Y + ++V+ ++ L ++ + +D++ +L CL TG P PDL I
Sbjct: 127 NTRFLLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCI 186
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEF 235
RT GE R+S+F+L Q + LYF WP+F
Sbjct: 187 RTGGEHRISNFLLWQLAYAELYFSDLFWPDF 217
>sp|Q8W3U4|HRT2_HEVBR Rubber cis-polyprenyltransferase HRT2 OS=Hevea brasiliensis GN=HRT2
PE=1 SV=1
Length = 284
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 25/261 (9%)
Query: 11 WFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGV 70
+ + + +L +G +P HIAFI+DGN R+AK+ GH GF L L +C +LGV
Sbjct: 18 YMRKGLYSILTQGPIPTHIAFILDGNGRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGV 77
Query: 71 REVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSD 130
+ T+YAFSI+NF+R EV +M+L K + +I E+ +N I +R +GN++LL
Sbjct: 78 KYATIYAFSIDNFRRKPHEVQYVMNLMLEKIEGMIMEESIINAYDICVRFVGNLKLLDEP 137
Query: 131 LIASFKEAMHITKDNTEGFLNVAFSYTSRDEMV----ETSRILIDGLRTNKITNE---DV 183
L + + M T N++ L +A YTS DE+V E+S+ D L++++I N+ D
Sbjct: 138 LKTAADKIMRATAKNSKFVLLLAVCYTSTDEIVHAVEESSK---DKLKSDEICNDGNGDC 194
Query: 184 TMDLFDKCLY-----------TGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLW 232
+ + + Y T +P PD++IRTSGETRLS+++L Q+ + LY H LW
Sbjct: 195 VIKIEEMEPYSEIKLVELERNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALW 254
Query: 233 PEF----TAWNLINAVFAFQY 249
PE W +IN + Y
Sbjct: 255 PEIGLRHVVWAVINCQRHYSY 275
>sp|Q49X45|ISPT_STAS1 Isoprenyl transferase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=uppS
PE=3 SV=1
Length = 254
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 132/225 (58%), Gaps = 3/225 (1%)
Query: 24 HVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENF 83
++P+H+A IMDGN R+AK+ I+GH +G + + + D+G++ +T+YAFS EN+
Sbjct: 24 NIPEHVAIIMDGNGRWAKQRKLPRIKGHYQGMQTVKKITKVASDIGIKYLTLYAFSTENW 83
Query: 84 KRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
R E EVN +M+L K + E L E +++ IG +E LPS + + +A TK
Sbjct: 84 TRPENEVNYIMNLPVNFLKTFLPE---LIENNVKVETIGFMEYLPSSTLKAIAKAKEDTK 140
Query: 144 DNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLI 203
DNT L A +Y R E++ + + + D L +T++D+T + D L T P+PDL+
Sbjct: 141 DNTGLKLIFAINYGGRAEILNSVKTIYDELTAKGLTSDDITEQMIDDHLMTHAYPDPDLL 200
Query: 204 IRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
IRTSGE R+S+F++ Q S F KLWP+F LIN + +Q
Sbjct: 201 IRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDKEELINCIKIYQ 245
>sp|Q8NZB2|ISPT_STRP8 Isoprenyl transferase OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=uppS PE=3 SV=1
Length = 249
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 126/226 (55%), Gaps = 7/226 (3%)
Query: 23 GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIEN 82
G +PKHI IMDGN R+AK+ + GH G D L E +LGV+ +TVYAFS EN
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 83 FKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHIT 142
+ R ++EV+ +M+L A F + + L+E ++I++IG LP D +A+ A+ T
Sbjct: 74 WSRPQDEVSFIMNLPVAFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKT 130
Query: 143 KDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP---- 198
K NT LN A +Y R E+ R + + K+ D+T DL L T P
Sbjct: 131 KRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYR 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
+PDLIIRTSGE RLS+F+ QS S YF LWP+F L+ A+
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAI 236
>sp|Q5X9U4|ISPT_STRP6 Isoprenyl transferase OS=Streptococcus pyogenes serotype M6 (strain
ATCC BAA-946 / MGAS10394) GN=uppS PE=3 SV=1
Length = 249
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 126/226 (55%), Gaps = 7/226 (3%)
Query: 23 GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIEN 82
G +PKHI IMDGN R+AK+ + GH G D L E +LGV+ +TVYAFS EN
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 83 FKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHIT 142
+ R ++EV+ +M+L A F + + L+E ++I++IG LP D +A+ A+ T
Sbjct: 74 WSRPQDEVSFIMNLPVAFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKT 130
Query: 143 KDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP---- 198
K NT LN A +Y R E+ R + + K+ D+T DL L T P
Sbjct: 131 KRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYR 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
+PDLIIRTSGE RLS+F+ QS S YF LWP+F L+ A+
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAI 236
>sp|Q7NPE7|ISPT_GLOVI Isoprenyl transferase OS=Gloeobacter violaceus (strain PCC 7421)
GN=uppS PE=3 SV=1
Length = 249
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 133/230 (57%), Gaps = 5/230 (2%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L +P+H+A IMDGN R+A + N + GH G L E L+ C D G+ +TVYAFS
Sbjct: 15 LDPNRLPRHVAAIMDGNGRWASKRNLPRVMGHQAGVSALKELLRCCKDWGIGALTVYAFS 74
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLI-EEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
EN+KR + EV LM L F++++ E ++ ++G+RIR +G + LP L ++ + A
Sbjct: 75 TENWKRPQYEVEFLMAL----FEKVLNHELSEMVDEGVRIRFVGALAHLPGALQSAIEGA 130
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP 198
M T+ NT VA +Y R E+V R L + +R+ ++ E + LF + LYT
Sbjct: 131 MAATEANTAVEFTVATNYGGRQEIVNACRELAEQVRSGRLLPEQIDEKLFAQHLYTRELS 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+PDL+IRTSGE RLS+++L Q + +Y LWP+F A+ ++Q
Sbjct: 191 DPDLLIRTSGEQRLSNYLLWQMAYTEIYVADVLWPDFDRAAFHAALQSYQ 240
>sp|Q82IC1|ISPT1_STRAW Isoprenyl transferase 1 OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=uppS1 PE=3 SV=1
Length = 257
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 12/241 (4%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L VPKHI IMDGNRR+AK + + T +GH G DK+ E L WC + V VT++ S
Sbjct: 23 LDHDQVPKHIGVIMDGNRRWAKAAGSTTAQGHRAGADKIEEFLGWCSETDVGVVTLWLLS 82
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
+NF R +EE+ L+ + + L + R+ +G ++LPS + + KEA
Sbjct: 83 TDNFDRPQEELGPLLGIIEGVVRTLAADGR------WRVHHVGTPDILPSQMQNALKEAE 136
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNED----VTMDLFDKCLYTG 195
T +NVA Y R E+ + R ++ + D V +DL K LYTG
Sbjct: 137 ETTAHVDGILVNVAIGYGGRQEIADAVRSMLLDAHEKGTSIPDLADAVDVDLIGKHLYTG 196
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV--FAFQYDFYT 253
P+PDL+IRTSGE RLS FML Q+ S YFC WP F + + A+ +A ++ Y
Sbjct: 197 AQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 256
Query: 254 N 254
N
Sbjct: 257 N 257
>sp|P35196|RER2_YEAST Dehydrodolichyl diphosphate synthase RER2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RER2 PE=1
SV=1
Length = 286
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 140/255 (54%), Gaps = 13/255 (5%)
Query: 8 TLNWFQYAIIKLLKKGH-VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCL 66
L W + + L+ + VP+H+ FIMDGNRR+A++ EGH GF ++ L+ C
Sbjct: 13 VLKWTKNIFSRTLRASNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCY 72
Query: 67 DLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIEL 126
+ GV TV+AFSIENFKR+ EV LM LAR + +++ E + + G+RI+IIG++ L
Sbjct: 73 EAGVDTATVFAFSIENFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSL 132
Query: 127 LPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMD 186
L L+ + A+ TK+N LN+ F YT R+E++ + I + +E
Sbjct: 133 LDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAAIDEST--- 189
Query: 187 LFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQ--SKSSFLYFCHKLWPEF----TAWNL 240
+ LYT P DL+IRTSG +RLSDF++ Q SK + LWPEF AW L
Sbjct: 190 -LESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWIL 248
Query: 241 INAVFAFQYDFYTNE 255
+ F+F F E
Sbjct: 249 LK--FSFHKSFLNKE 261
>sp|Q99XY1|ISPT_STRP1 Isoprenyl transferase OS=Streptococcus pyogenes serotype M1 GN=uppS
PE=3 SV=1
Length = 249
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 125/226 (55%), Gaps = 7/226 (3%)
Query: 23 GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIEN 82
G +PKHI IMDGN R+AK+ + GH G D L E +LGV+ +TVYAFS EN
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 83 FKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHIT 142
+ R ++EV+ +M+L F + + L+E ++I++IG LP D +A+ A+ T
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKT 130
Query: 143 KDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP---- 198
K NT LN A +Y R E+ R + + K+ D+T DL L T P
Sbjct: 131 KRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYR 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
+PDLIIRTSGE RLS+F+ QS S YF LWP+F L+ A+
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAI 236
>sp|P0DH33|ISPT_STRPQ Isoprenyl transferase OS=Streptococcus pyogenes serotype M3 (strain
SSI-1) GN=uppS PE=3 SV=1
Length = 249
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 127/231 (54%), Gaps = 7/231 (3%)
Query: 23 GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIEN 82
G +PKHI IMDGN R+AK+ + GH G D L E +LGV+ +TVYAFS EN
Sbjct: 14 GGIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 83 FKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHIT 142
+ R ++EV+ +M+L F + + L+E ++I++IG LP D +A+ A+ T
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKT 130
Query: 143 KDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP---- 198
K NT LN A +Y R E+ R + + K+ D+T DL L T P
Sbjct: 131 KRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYR 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+PDLIIRTSGE RLS+F+ QS S YF LWP+F L+ A+ + +
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNH 241
>sp|P0DH32|ISPT_STRP3 Isoprenyl transferase OS=Streptococcus pyogenes serotype M3 (strain
ATCC BAA-595 / MGAS315) GN=uppS PE=3 SV=1
Length = 249
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 127/231 (54%), Gaps = 7/231 (3%)
Query: 23 GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIEN 82
G +PKHI IMDGN R+AK+ + GH G D L E +LGV+ +TVYAFS EN
Sbjct: 14 GGIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 83 FKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHIT 142
+ R ++EV+ +M+L F + + L+E ++I++IG LP D +A+ A+ T
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKT 130
Query: 143 KDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP---- 198
K NT LN A +Y R E+ R + + K+ D+T DL L T P
Sbjct: 131 KRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYR 190
Query: 199 EPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+PDLIIRTSGE RLS+F+ QS S YF LWP+F L+ A+ + +
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNH 241
>sp|Q895K8|ISPT_CLOTE Isoprenyl transferase OS=Clostridium tetani (strain Massachusetts /
E88) GN=uppS PE=3 SV=1
Length = 255
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 131/225 (58%), Gaps = 3/225 (1%)
Query: 24 HVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENF 83
++PKHIA IMDGN R+AK GH G + + + ++ C ++GVR +T+YAFS EN+
Sbjct: 25 NIPKHIAIIMDGNGRWAKERKLPRSLGHKAGVETIRDIVKECNNIGVRYLTLYAFSTENW 84
Query: 84 KRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
KR +EE+N LM+L ++ + E L++ + + IG++ LP +A + TK
Sbjct: 85 KRPKEEINALMELLVNYLRKEVAE---LHQNNVVVNTIGDVSKLPKACEDELMKAYNKTK 141
Query: 144 DNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLI 203
+NT LN+A +Y RDE++ +++ + + E+V DL LYT P+PDLI
Sbjct: 142 NNTGLVLNLALNYGGRDEIIRAIKLMYKDIEKKGLDIENVNEDLLKNYLYTKGMPDPDLI 201
Query: 204 IRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
IR SGE R+S+F+L Q S ++ + WP+F +L A+ +Q
Sbjct: 202 IRPSGEQRISNFLLWQCAYSEFWYSNIKWPDFKKHHLHKAIKDYQ 246
>sp|Q8UFL9|ISPT_AGRT5 Isoprenyl transferase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=uppS PE=3 SV=1
Length = 247
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 136/223 (60%), Gaps = 3/223 (1%)
Query: 22 KGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIE 81
+ +P+H+A IMDGN R+AK+ + GH +G + + ET++ D G+ +T++AFS E
Sbjct: 6 RSSIPEHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGISYLTLFAFSSE 65
Query: 82 NFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHI 141
N++R E EV+ LM L +A +R + E L+ + +R+RIIG+ + L +D+ + +EA +
Sbjct: 66 NWRRPESEVSDLMGLLKAFIRRDLAE---LHRENVRVRIIGDRQGLKTDIRSLLEEAEQM 122
Query: 142 TKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPD 201
T NT+ L +AF+Y SRDE+ + + + +++ + +T ++ L T P+PD
Sbjct: 123 TAGNTKLTLVIAFNYGSRDEITRATASIARDVAEGRLSADAITPEMISSRLDTSGMPDPD 182
Query: 202 LIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
LIIRTSGE RLS+F+L Q+ S F + WP+F +A+
Sbjct: 183 LIIRTSGEERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAI 225
>sp|Q5V1I1|UPPS_HALMA Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=uppS PE=3 SV=2
Length = 304
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
P H+A IMDGNRRYA++ K EGH +G L WC +LG+REVT+Y FS ENF
Sbjct: 24 TPDHVAVIMDGNRRYAEKQGTKKQEGHKEGAQTTEALLNWCDELGIREVTLYTFSTENFD 83
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R EE + DL K R + D+++E G+ IR IG E+LP + + A T
Sbjct: 84 RDPEEREHIFDLVEQKL-RTFADADRVHEAGVCIRAIGETEMLPERVRDAIDYAEGRTAQ 142
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
+ LN+A +Y R E++ +R + + + DV+ + ++ LY G + + DLI+
Sbjct: 143 YDQLNLNIALAYGGRAELLGAARDVAAAVENETLDPTDVSAETIEERLYEGPTRDVDLIV 202
Query: 205 RTSGETRLSDFML--VQSKSSFLYFCHKLWPEFTAWNLINAVFAFQYDFYTNEMWRADKS 262
RT G+ R S+F+ + +FC WPEF + + A+ +Q + RA++S
Sbjct: 203 RTGGDERTSNFLPWHANGNEAATFFCTPYWPEFRKVDFLRAIRTYQNREDSWRTTRAERS 262
Query: 263 KSLTSA 268
+L A
Sbjct: 263 LALVRA 268
>sp|Q9JX35|ISPT_NEIMA Isoprenyl transferase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=uppS PE=3 SV=1
Length = 248
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 11/231 (4%)
Query: 19 LLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAF 78
+L+ +PKHIA IMDGN R+AK+ I GH +G D L ++ C LGV+ +TV+AF
Sbjct: 8 VLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAF 67
Query: 79 SIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
S EN++R E+EV+ LM L + L ++ +L+E +R++I+G+ E ++ +EA
Sbjct: 68 STENWRRPEDEVSFLMGLF---LQALQKQVRRLHENNMRLKILGSRERFNRQILKGIEEA 124
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILI-DGLRTNKITNEDVTMDLFDKCLYTGTS 197
+T +NT L++A Y R ++++ + LI +G+ ++T D K L G +
Sbjct: 125 EALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV-------SEITEDTLAKYLMLGDA 177
Query: 198 PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
PEPDL IRT GETR+S+F+L Q + LYF LWP+F L +AV +FQ
Sbjct: 178 PEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQ 228
>sp|Q9K1G6|ISPT_NEIMB Isoprenyl transferase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=uppS PE=3 SV=1
Length = 248
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 11/231 (4%)
Query: 19 LLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAF 78
+L+ +PKHIA IMDGN R+AK+ I GH +G D L ++ C LGV+ +TV+AF
Sbjct: 8 VLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAF 67
Query: 79 SIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
S EN++R E+EV+ LM L + L ++ +L+E +R++I+G+ E ++ +EA
Sbjct: 68 STENWRRPEDEVSFLMGLF---LQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEA 124
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILI-DGLRTNKITNEDVTMDLFDKCLYTGTS 197
+T +NT L++A Y R ++++ + LI +G+ ++T D K L G +
Sbjct: 125 EALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV-------SEITEDTLAKHLMLGDA 177
Query: 198 PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
PEPDL IRT GETR+S+F+L Q + LYF LWP+F L +AV +FQ
Sbjct: 178 PEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQ 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,019,037
Number of Sequences: 539616
Number of extensions: 4275118
Number of successful extensions: 12526
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 11992
Number of HSP's gapped (non-prelim): 233
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)