Your job contains 1 sequence.
>psy16152
MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE
TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI
IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN
EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL
INAVFAFQYDFYTNEMWRADKSKSLTSAGEAFVNELYSKRDEYIANPQCNLQHGI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16152
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0029980 - symbol:CG10778 species:7227 "Drosophila ... 711 3.3e-70 1
UNIPROTKB|Q86SQ9 - symbol:DHDDS "Dehydrodolichyl diphosph... 707 8.9e-70 1
UNIPROTKB|Q58DN9 - symbol:DHDDS "Dehydrodolichyl diphosph... 702 3.0e-69 1
UNIPROTKB|E1C3V5 - symbol:DHDDS "Uncharacterized protein"... 696 1.3e-68 1
UNIPROTKB|J9P7C8 - symbol:DHDDS "Uncharacterized protein"... 692 3.5e-68 1
MGI|MGI:1914672 - symbol:Dhdds "dehydrodolichyl diphospha... 687 1.2e-67 1
RGD|1311560 - symbol:Dhdds "dehydrodolichyl diphosphate s... 687 1.2e-67 1
ZFIN|ZDB-GENE-040426-2236 - symbol:dhdds "dehydrodolichyl... 668 1.2e-65 1
UNIPROTKB|D4A6Z6 - symbol:Dhdds "Protein Dhdds" species:1... 431 1.3e-61 2
UNIPROTKB|Q5T0A3 - symbol:DHDDS "Dehydrodolichyl diphosph... 376 1.1e-60 2
UNIPROTKB|Q5T0A2 - symbol:DHDDS "Dehydrodolichyl diphosph... 618 2.4e-60 1
WB|WBGene00044025 - symbol:T01G1.4 species:6239 "Caenorha... 565 9.9e-55 1
DICTYBASE|DDB_G0291436 - symbol:DDB_G0291436 "Dehydrodoli... 541 3.5e-52 1
POMBASE|SPAC4D7.04c - symbol:SPAC4D7.04c "cis-prenyltrans... 513 3.2e-49 1
CGD|CAL0004730 - symbol:orf19.4028 species:5476 "Candida ... 497 1.6e-47 1
UNIPROTKB|E9PI09 - symbol:DHDDS "Dehydrodolichyl diphosph... 496 2.0e-47 1
UNIPROTKB|Q5T0A1 - symbol:DHDDS "Dehydrodolichyl diphosph... 496 2.0e-47 1
UNIPROTKB|E9PR24 - symbol:DHDDS "Dehydrodolichyl diphosph... 494 3.3e-47 1
UNIPROTKB|F1STT4 - symbol:DHDDS "Uncharacterized protein"... 492 5.4e-47 1
ASPGD|ASPL0000029539 - symbol:AN5600 species:162425 "Emer... 383 2.3e-46 2
UNIPROTKB|G4NH37 - symbol:MGG_12110 "Dehydrodolichyl diph... 355 1.4e-44 2
UNIPROTKB|E9PI64 - symbol:DHDDS "Dehydrodolichyl diphosph... 435 5.9e-41 1
TIGR_CMR|BA_3961 - symbol:BA_3961 "undecaprenyl diphospha... 433 9.6e-41 1
SGD|S000000206 - symbol:RER2 "Cis-prenyltransferase invol... 425 6.8e-40 1
TAIR|locus:2175183 - symbol:cPT9 "cis-prenyltransferase 9... 414 9.9e-39 1
UNIPROTKB|E9PRS7 - symbol:DHDDS "Dehydrodolichyl diphosph... 409 3.4e-38 1
TAIR|locus:2175168 - symbol:cPT8 "cis-prenyltransferase 8... 403 1.5e-37 1
SGD|S000004707 - symbol:SRT1 "Cis-prenyltransferase" spec... 401 2.4e-37 1
TIGR_CMR|DET_0373 - symbol:DET_0373 "undecaprenyl diphosp... 399 3.9e-37 1
TIGR_CMR|SPO_1665 - symbol:SPO_1665 "undecaprenyl diphosp... 389 4.4e-36 1
TIGR_CMR|CHY_1781 - symbol:CHY_1781 "undecaprenyl diphosp... 385 1.2e-35 1
UNIPROTKB|Q97SR4 - symbol:uppS "Isoprenyl transferase" sp... 365 1.5e-33 1
UNIPROTKB|Q47SS3 - symbol:Tfu_0456 "(2Z,6E)-farnesyl diph... 359 6.7e-33 1
TAIR|locus:505006702 - symbol:AT5G58784 species:3702 "Ara... 359 6.7e-33 1
TAIR|locus:2178838 - symbol:cPT5 "cis -prenyltransferase ... 358 8.5e-33 1
TAIR|locus:2046867 - symbol:CPT "cis-prenyltransferase" s... 357 1.1e-32 1
TAIR|locus:505006701 - symbol:cPT6 "cis-prenyltransferase... 357 1.1e-32 1
UNIPROTKB|Q9KPV6 - symbol:uppS "Ditrans,polycis-undecapre... 356 1.4e-32 1
TIGR_CMR|VC_2256 - symbol:VC_2256 "undecaprenyl diphospha... 356 1.4e-32 1
TIGR_CMR|GSU_1917 - symbol:GSU_1917 "undecaprenyl diphosp... 355 1.8e-32 1
TAIR|locus:2178823 - symbol:cPT4 "cis-prenyltransferase 4... 354 2.3e-32 1
TIGR_CMR|CBU_1382 - symbol:CBU_1382 "undecaprenyl diphosp... 350 6.0e-32 1
UNIPROTKB|A0R2W4 - symbol:uppS "(2Z,6E)-farnesyl diphosph... 348 9.8e-32 1
TAIR|locus:2053903 - symbol:cPT1 "cis-prenyltransferase 1... 344 2.6e-31 1
UNIPROTKB|Q47RM6 - symbol:Tfu_0853 "Trans,polycis-polypre... 344 2.6e-31 1
UNIPROTKB|A0R0S4 - symbol:uppS "Decaprenyl diphosphate sy... 340 6.9e-31 1
TIGR_CMR|NSE_0944 - symbol:NSE_0944 "undecaprenyl diphosp... 332 4.9e-30 1
TIGR_CMR|SO_1633 - symbol:SO_1633 "undecaprenyl diphospha... 318 1.5e-28 1
UNIPROTKB|O53434 - symbol:MT1118 "(2Z,6E)-farnesyl diphos... 317 1.9e-28 1
TIGR_CMR|CPS_1557 - symbol:CPS_1557 "undecaprenyl diphosp... 311 8.2e-28 1
UNIPROTKB|P60479 - symbol:uppS "Decaprenyl diphosphate sy... 308 1.7e-27 1
TAIR|locus:2046857 - symbol:AT2G23400 species:3702 "Arabi... 304 4.5e-27 1
GENEDB_PFALCIPARUM|MAL8P1.22 - symbol:MAL8P1.22 "dehydrod... 208 1.7e-26 2
UNIPROTKB|Q8IB97 - symbol:MAL8P1.22 "Dehydrodolichyl diph... 208 1.7e-26 2
UNIPROTKB|P60472 - symbol:ispU "subunit of undecaprenyl d... 297 2.5e-26 1
UNIPROTKB|H0Y4T1 - symbol:DHDDS "Dehydrodolichyl diphosph... 292 8.4e-26 1
UNIPROTKB|E9PSH7 - symbol:DHDDS "Dehydrodolichyl diphosph... 291 1.1e-25 1
TIGR_CMR|CJE_0911 - symbol:CJE_0911 "undecaprenyl diphosp... 248 3.9e-21 1
UNIPROTKB|E9PL99 - symbol:DHDDS "Dehydrodolichyl diphosph... 223 1.7e-18 1
UNIPROTKB|I3LU88 - symbol:I3LU88 "Uncharacterized protein... 211 3.2e-17 1
UNIPROTKB|Q5T0A0 - symbol:DHDDS "Dehydrodolichyl diphosph... 178 1.6e-13 1
UNIPROTKB|E9PKJ5 - symbol:DHDDS "Dehydrodolichyl diphosph... 175 3.6e-13 1
TIGR_CMR|CHY_0237 - symbol:CHY_0237 "putative undecapreny... 139 3.8e-13 2
UNIPROTKB|Q5T0A6 - symbol:DHDDS "Dehydrodolichyl diphosph... 161 1.5e-11 1
>FB|FBgn0029980 [details] [associations]
symbol:CG10778 species:7227 "Drosophila melanogaster"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0006911 EMBL:AE014298 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 GeneTree:ENSGT00390000007879 OMA:LYTRGQP
EMBL:AY069247 RefSeq:NP_572425.1 UniGene:Dm.102 HSSP:O82827
SMR:Q9W3M6 IntAct:Q9W3M6 STRING:Q9W3M6 EnsemblMetazoa:FBtr0071131
EnsemblMetazoa:FBtr0331433 GeneID:31708 KEGG:dme:Dmel_CG10778
UCSC:CG10778-RA FlyBase:FBgn0029980 InParanoid:Q9W3M6
OrthoDB:EOG4K0P44 GenomeRNAi:31708 NextBio:774944 Uniprot:Q9W3M6
Length = 300
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 142/282 (50%), Positives = 194/282 (68%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKK-GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLA 59
MSWV D W + ++ L+ G++P H+AF+MDGNRR+A+ IEGHS+GF+KLA
Sbjct: 1 MSWVSDYKYTWTERIAMRTLRACGYIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLA 60
Query: 60 ETLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIR 119
+ L+WCLD+GVREVT +AFSIENFKR+ EEV GL +LAR KF RL+EE +L+E GIRIR
Sbjct: 61 DCLRWCLDVGVREVTTFAFSIENFKRSNEEVEGLFNLAREKFARLLEETARLDEHGIRIR 120
Query: 120 IIGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVET-SRILIDGLRTNKI 178
+IGNIELLP DL AM T+ N + FLNVAF+YTSRDE+ + IL G + +
Sbjct: 121 VIGNIELLPHDLQKLVASAMLSTERNDKLFLNVAFAYTSRDEITQAVETILRHG--SQDL 178
Query: 179 TNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAW 238
ED++ L ++CLYT SP PDL+ RTSGETRLSDFM+ Q +S LYF + LWP+ T W
Sbjct: 179 AGEDISERLLEECLYTRHSPPPDLVFRTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFW 238
Query: 239 NLINAVFAFQYDFYTNEMWRADKSKSLTSAGEAFVNELYSKR 280
+ + ++ A+Q D + + +R +++ + S A + YS+R
Sbjct: 239 HFLASILAYQRDRWQLDDFR--RAERMQSCQLAKATDFYSER 278
>UNIPROTKB|Q86SQ9 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 UniPathway:UPA00378
GO:GO:0005789 EMBL:CH471059 GO:GO:0006486 Orphanet:791
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AB090852
EMBL:GU727641 EMBL:AK023164 EMBL:AK297134 EMBL:AK316485
EMBL:AL513365 EMBL:BC003643 EMBL:BC004117 EMBL:BC034152
IPI:IPI00410097 IPI:IPI00410099 IPI:IPI00514787 IPI:IPI00922374
RefSeq:NP_001230493.1 RefSeq:NP_001230494.1 RefSeq:NP_079163.2
RefSeq:NP_995583.1 UniGene:Hs.369385 ProteinModelPortal:Q86SQ9
SMR:Q86SQ9 STRING:Q86SQ9 PhosphoSite:Q86SQ9 DMDM:116241329
PRIDE:Q86SQ9 DNASU:79947 Ensembl:ENST00000236342
Ensembl:ENST00000360009 Ensembl:ENST00000525682
Ensembl:ENST00000526219 GeneID:79947 KEGG:hsa:79947 UCSC:uc001bmk.3
UCSC:uc001bml.3 UCSC:uc001bmn.3 CTD:79947 GeneCards:GC01P026758
HGNC:HGNC:20603 HPA:HPA026721 HPA:HPA026727 MIM:608172 MIM:613861
neXtProt:NX_Q86SQ9 PharmGKB:PA134867119 HOVERGEN:HBG051350
OMA:IAYSELF GenomeRNAi:79947 NextBio:69906 ArrayExpress:Q86SQ9
Bgee:Q86SQ9 CleanEx:HS_DHDDS Genevestigator:Q86SQ9
GermOnline:ENSG00000117682 Uniprot:Q86SQ9
Length = 333
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 138/279 (49%), Positives = 188/279 (67%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
D++ L DKCLYT SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 181 SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQYDFYT----NEMWRADKSKSLTSAGEAFVNE 275
A+ FQ + +M+ ++ + +A V E
Sbjct: 241 FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTE 279
>UNIPROTKB|Q58DN9 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase isoform
a" species:9913 "Bos taurus" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 CTD:79947
HOVERGEN:HBG051350 OMA:IAYSELF GeneTree:ENSGT00390000007879
EMBL:DAAA02006373 EMBL:BT021558 IPI:IPI00694399
RefSeq:NP_001030423.1 UniGene:Bt.87215 STRING:Q58DN9
Ensembl:ENSBTAT00000010328 GeneID:523264 KEGG:bta:523264
NextBio:20873699 Uniprot:Q58DN9
Length = 316
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 135/248 (54%), Positives = 178/248 (71%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSWV + L++++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWVKEGELSFWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLAREKFSRLMEEQEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQELVAQAVQTTKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L DKCLYT SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 181 SDVSESLLDKCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQ 248
A+ FQ
Sbjct: 241 CEAILQFQ 248
>UNIPROTKB|E1C3V5 [details] [associations]
symbol:DHDDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016765 "transferase activity, transferring alkyl or
aryl (other than methyl) groups" evidence=IEA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 CTD:79947
GeneTree:ENSGT00390000007879 OMA:ETLRWCK EMBL:AADN02051390
IPI:IPI00589854 RefSeq:XP_417694.2 UniGene:Gga.31084
Ensembl:ENSGALT00000000525 GeneID:419543 KEGG:gga:419543
NextBio:20822582 Uniprot:E1C3V5
Length = 333
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 133/262 (50%), Positives = 185/262 (70%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L + ++K G +PKH+AFIMDGNRRYA++ + + +GHS+GFDKLA+
Sbjct: 1 MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQ 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+REVTVYAFSIENFKR++EEV+GLMDLAR KF RL+EE++ L + G+ IR+
Sbjct: 61 TLRWCLNLGIREVTVYAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP D+ +A+ T++ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLPLLPLDVQELIAQAVMATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L DKCLYT SP+PDL+IRTSGE RLSDF+L Q+ S L F LWPE++ WNL
Sbjct: 181 SDVSESLLDKCLYTSNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNL 240
Query: 241 INAVFAFQYDFYTNEMWRADKS 262
A+ FQ ++ N + +A S
Sbjct: 241 CEAILRFQMNY--NALQKARDS 260
>UNIPROTKB|J9P7C8 [details] [associations]
symbol:DHDDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016765 "transferase activity, transferring
alkyl or aryl (other than methyl) groups" evidence=IEA]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 CTD:79947
OMA:IAYSELF GeneTree:ENSGT00390000007879 EMBL:AAEX03001720
RefSeq:XP_854980.2 Ensembl:ENSCAFT00000046729 GeneID:612157
KEGG:cfa:612157 Uniprot:J9P7C8
Length = 333
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 136/279 (48%), Positives = 186/279 (66%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ TK + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQELIAQAVRATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L DKCLYT SP PD++IRTSGE RLSDF+L Q+ L F LWPE+T WNL
Sbjct: 181 SDVSESLLDKCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQYDFY----TNEMWRADKSKSLTSAGEAFVNE 275
A+ +Q + +M+ ++ + +A V E
Sbjct: 241 CEAILQYQMNHSMLQKARDMYAEERKRQQLERDQAAVTE 279
>MGI|MGI:1914672 [details] [associations]
symbol:Dhdds "dehydrodolichyl diphosphate synthase"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 MGI:MGI:1914672 GO:GO:0005789 GO:GO:0006486
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 CTD:79947 HOVERGEN:HBG051350 OMA:IAYSELF
EMBL:AK034277 EMBL:AK036929 EMBL:AK049991 EMBL:AK135087
EMBL:AK149138 EMBL:AK171207 EMBL:AL837508 EMBL:AL670680
EMBL:BC004011 IPI:IPI00116293 IPI:IPI00227580 RefSeq:NP_080420.2
UniGene:Mm.100290 ProteinModelPortal:Q99KU1 SMR:Q99KU1
STRING:Q99KU1 PhosphoSite:Q99KU1 PRIDE:Q99KU1
Ensembl:ENSMUST00000012262 Ensembl:ENSMUST00000105887
Ensembl:ENSMUST00000144668 GeneID:67422 KEGG:mmu:67422
UCSC:uc008vdv.1 GeneTree:ENSGT00390000007879 InParanoid:A3KGL4
NextBio:324524 Bgee:Q99KU1 CleanEx:MM_DHDDS Genevestigator:Q99KU1
GermOnline:ENSMUSG00000012117 Uniprot:Q99KU1
Length = 333
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 135/279 (48%), Positives = 186/279 (66%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G VPKHIAFIMDGNRRYAK+ + EGH++GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GL+DLAR KF L+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L DKCLY+ SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 181 SDVSESLLDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQYDF----YTNEMWRADKSKSLTSAGEAFVNE 275
A+ FQ + +M+ ++ + +A V E
Sbjct: 241 CEAILQFQRNHGALQKARDMYAEERKRRQLERDQAAVTE 279
>RGD|1311560 [details] [associations]
symbol:Dhdds "dehydrodolichyl diphosphate synthase"
species:10116 "Rattus norvegicus" [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 RGD:1311560 eggNOG:COG0020 KO:K11778
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 CTD:79947
HOVERGEN:HBG051350 GeneTree:ENSGT00390000007879 EMBL:CH473968
OMA:ETLRWCK EMBL:BC085875 IPI:IPI00365261 RefSeq:NP_001011978.1
UniGene:Rn.24616 STRING:Q5U2T2 Ensembl:ENSRNOT00000020051
GeneID:298541 KEGG:rno:298541 UCSC:RGD:1311560 InParanoid:Q5U2T2
OrthoDB:EOG4ZCT4W NextBio:643882 Genevestigator:Q5U2T2
Uniprot:Q5U2T2
Length = 333
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 134/279 (48%), Positives = 188/279 (67%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G VPKHIAFIMDGNRRYAK+ + EGH++GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKVGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GL+DLAR KF L+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLKKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQKKIAQAVQATKNYNKCFLNVCFAYTSRHEITNAVREMAWGVEQGLLEP 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L D+CLY+ SP+PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 181 SDVSESLLDQCLYSNHSPQPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 INAVFAFQYDFYT----NEMWRADKSKSLTSAGEAFVNE 275
A+ FQ + +M+ ++ + +A V E
Sbjct: 241 CEAILQFQMNHSALQKARDMYAEERKRHQLERDQAAVTE 279
>ZFIN|ZDB-GENE-040426-2236 [details] [associations]
symbol:dhdds "dehydrodolichyl diphosphate
synthase" species:7955 "Danio rerio" [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0016740 "transferase activity"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 ZFIN:ZDB-GENE-040426-2236
GO:GO:0050908 GO:GO:0042462 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 CTD:79947
HOVERGEN:HBG051350 OrthoDB:EOG4ZCT4W EMBL:BC067175 IPI:IPI00492501
RefSeq:NP_998352.1 UniGene:Dr.80056 ProteinModelPortal:Q6NXA2
STRING:Q6NXA2 PRIDE:Q6NXA2 GeneID:406468 KEGG:dre:406468
InParanoid:Q6NXA2 NextBio:20818059 ArrayExpress:Q6NXA2 Bgee:Q6NXA2
Uniprot:Q6NXA2
Length = 335
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 126/248 (50%), Positives = 176/248 (70%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ + +LK G +PKH+AFIMDGNRRYA++ + + EGH++GF+KLAE
Sbjct: 1 MSWIREEKLSLLERLTANILKAGPMPKHVAFIMDGNRRYAQKEHKERQEGHTQGFEKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++EEV+GLM+LAR KF RL+ E++ L + G+ IR+
Sbjct: 61 TLRWCLNLGIHEVTVYAFSIENFKRSKEEVDGLMELARQKFSRLLTEQENLEKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ T+ + + FLNV F+YTSR E+ + + G+ I +
Sbjct: 121 LGDLTLLPEDLQTLIAKAVVSTRAHNKCFLNVCFAYTSRHEIANAVKEMAWGVEQGLIKS 180
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
DV+ L +CLY+ SP PDL+IRTSGE RLSDF+L Q+ S L F LWPE++ WNL
Sbjct: 181 SDVSEVLLSECLYSSNSPNPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYSFWNL 240
Query: 241 INAVFAFQ 248
A+ FQ
Sbjct: 241 CEAILQFQ 248
>UNIPROTKB|D4A6Z6 [details] [associations]
symbol:Dhdds "Protein Dhdds" species:10116 "Rattus
norvegicus" [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
RGD:1311560 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 IPI:IPI00952082
Ensembl:ENSRNOT00000065740 ArrayExpress:D4A6Z6 Uniprot:D4A6Z6
Length = 299
Score = 431 (156.8 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 80/144 (55%), Positives = 111/144 (77%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G VPKHIAFIMDGNRRYAK+ + EGH++GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKVGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GL+DLAR KF L+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLKKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKD 144
+G++ LLP DL +A+ TK+
Sbjct: 121 LGDLHLLPLDLQKKIAQAVQATKN 144
Score = 217 (81.4 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 44/117 (37%), Positives = 67/117 (57%)
Query: 163 VETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKS 222
++ + + ++ K N DV+ L D+CLY+ SP+PD++IRTSGE RLSDF+L Q+
Sbjct: 129 LDLQKKIAQAVQATKNYNNDVSESLLDQCLYSNHSPQPDILIRTSGEVRLSDFLLWQTSH 188
Query: 223 SFLYFCHKLWPEFTAWNLINAVFAFQYDFYT----NEMWRADKSKSLTSAGEAFVNE 275
S L F LWPE+T WNL A+ FQ + +M+ ++ + +A V E
Sbjct: 189 SCLVFQPVLWPEYTFWNLCEAILQFQMNHSALQKARDMYAEERKRHQLERDQAAVTE 245
Score = 38 (18.4 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 159 RDEMVETSRILIDGLRTN 176
RD+ T ++L +GL+ N
Sbjct: 238 RDQAAVTEQLLREGLQAN 255
>UNIPROTKB|Q5T0A3 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006053
EMBL:AL513365 UniGene:Hs.369385 HGNC:HGNC:20603 HOVERGEN:HBG051350
IPI:IPI01011907 SMR:Q5T0A3 Ensembl:ENST00000430232 Uniprot:Q5T0A3
Length = 216
Score = 376 (137.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 71/112 (63%), Positives = 90/112 (80%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLN 112
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK LN
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKCFLN 112
Score = 263 (97.6 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 51/100 (51%), Positives = 64/100 (64%)
Query: 149 FLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIRTSG 208
FLNV F+YTSR E+ R + G+ + D++ L DKCLYT SP PD++IRTSG
Sbjct: 110 FLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSG 169
Query: 209 ETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
E RLSDF+L Q+ S L F LWPE+T WNL A+ FQ
Sbjct: 170 EVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 209
>UNIPROTKB|Q5T0A2 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006053
EMBL:AL513365 UniGene:Hs.369385 HGNC:HGNC:20603 HOVERGEN:HBG051350
IPI:IPI00647181 SMR:Q5T0A2 Ensembl:ENST00000436153 Uniprot:Q5T0A2
Length = 222
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 120/222 (54%), Positives = 161/222 (72%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+ +
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 ---EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQ 219
+D++ L DKCLYT SP PD++IRTSGE RLSDF+L Q
Sbjct: 181 RYPDDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQ 222
>WB|WBGene00044025 [details] [associations]
symbol:T01G1.4 species:6239 "Caenorhabditis elegans"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 GeneTree:ENSGT00390000007879 OMA:LYTRGQP
EMBL:Z92811 RefSeq:NP_001023351.1 ProteinModelPortal:Q5FC21
SMR:Q5FC21 STRING:Q5FC21 EnsemblMetazoa:T01G1.4.1
EnsemblMetazoa:T01G1.4.2 GeneID:266904 KEGG:cel:CELE_T01G1.4
UCSC:T01G1.4 CTD:266904 WormBase:T01G1.4 InParanoid:Q5FC21
NextBio:953384 Uniprot:Q5FC21
Length = 299
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 114/264 (43%), Positives = 162/264 (61%)
Query: 3 W-VVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSN-AKTIEGHSKGFDKLAE 60
W V W+Q+ + + + G +P+H+AF+MDGNRR+AK + I+GH KGF +LA+
Sbjct: 13 WFVAQQEQPWWQWLLRRFIASGPIPRHVAFVMDGNRRFAKTKHLGNVIKGHEKGFTQLAK 72
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
L WC G+RE+TVYAFSIENFKR+EEEV+GLM LA KF++L+ + +KL+EK I R
Sbjct: 73 ILDWCNRFGIREITVYAFSIENFKRSEEEVSGLMRLAEEKFQKLLNDSEKLDEKRICFRF 132
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITN 180
GN LL S L + H T++ G LNV YTSRDE+ + + ++ K+
Sbjct: 133 YGNRSLLSSRLQKLMSDIEHRTENFDGGRLNVCMPYTSRDEIARSFETIRKHVKDGKVNV 192
Query: 181 EDVTMDLFDKCLYTGTS-PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWN 239
+++ + D CL +G PDL IRTSGE RLSDF++ Q+ + +YF LWPEF +N
Sbjct: 193 DEINESMIDACLDSGCGGTSPDLFIRTSGEHRLSDFLMWQASETHVYFDDVLWPEFGYFN 252
Query: 240 LINAVFAFQYDFYTNEMWRADKSK 263
L A+ +QY Y + + SK
Sbjct: 253 LCKAILNYQY--YRTTVTKMTSSK 274
>DICTYBASE|DDB_G0291436 [details] [associations]
symbol:DDB_G0291436 "Dehydrodolichyl diphosphate
synthetase" species:44689 "Dictyostelium discoideum" [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 dictyBase:DDB_G0291436
EMBL:AAFI02000177 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 RefSeq:XP_635207.1 ProteinModelPortal:Q54EN3
STRING:Q54EN3 EnsemblProtists:DDB0183890 GeneID:8628152
KEGG:ddi:DDB_G0291436 InParanoid:Q54EN3 Uniprot:Q54EN3
Length = 420
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 112/257 (43%), Positives = 167/257 (64%)
Query: 3 WVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETL 62
W+ D F+ A LK G +PKHI IMDGNRR+A+R++ +T EGH KGF+ + +
Sbjct: 105 WMYDQN---FKIAS-STLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLC 160
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
QW L LGV+ ++VYAFSIENFKR++ EV LM+LA KF +I + KL + G+RIR++G
Sbjct: 161 QWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVG 220
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGL-RTNKITNE 181
+ +P + +A+ T++NT+ LN+ SYTS +E++ + +IL G+ + KI E
Sbjct: 221 DHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIE 280
Query: 182 DVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLI 241
D+ DLF+ CLY + D++IRTSGE RLSDFML QS + L + LWP+F+ ++ I
Sbjct: 281 DIDQDLFENCLYI--KEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFI 338
Query: 242 NAVFAFQYDFYT--NEM 256
+F +Q++ T NE+
Sbjct: 339 YIIFLYQFNSKTLKNEI 355
>POMBASE|SPAC4D7.04c [details] [associations]
symbol:SPAC4D7.04c "cis-prenyltransferase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004659
"prenyltransferase activity" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=ISO] [GO:0006486 "protein glycosylation"
evidence=ISO] [GO:0006487 "protein N-linked glycosylation"
evidence=NAS] [GO:0019408 "dolichol biosynthetic process"
evidence=ISO] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 PomBase:SPAC4D7.04c GO:GO:0005783 EMBL:CU329670
GO:GO:0006487 eggNOG:COG0020 KO:K11778 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 GO:GO:0019408 OMA:IAYSELF GO:GO:0004659
OrthoDB:EOG4XWK72 PIR:T38795 RefSeq:NP_594957.1
ProteinModelPortal:O14171 STRING:O14171 EnsemblFungi:SPAC4D7.04c.1
GeneID:2543620 KEGG:spo:SPAC4D7.04c NextBio:20804626 Uniprot:O14171
Length = 264
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 104/242 (42%), Positives = 156/242 (64%)
Query: 8 TLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLD 67
TL+ + +I +K+G VP+HIAF+MDGNRR+A++ +TIEGHS GF+ L L+ CL
Sbjct: 17 TLDQLETMMINTIKRGKVPQHIAFVMDGNRRWARQRRMETIEGHSSGFEALKSLLKVCLK 76
Query: 68 LGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELL 127
LGV+EV+ + FSIENFKR++ EV+ LM++A+ ++ D +++ GIRIRI+G++ L
Sbjct: 77 LGVKEVSAFTFSIENFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRL 136
Query: 128 PSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDL 187
D++ + +A+ ITK NT+ LNV F YTSR E+ + + ++ IT ED+ D+
Sbjct: 137 QPDVLETALKAVEITKHNTKATLNVCFPYTSRHEIATSVQSIVKMAEDGTITPEDIDEDI 196
Query: 188 FDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQS-KSSFLYFCHKLWPEFTAWNLINAVFA 246
F+K L S DL+IRTSG RLSDFML Q K++ + F WP+F+ W +
Sbjct: 197 FEKNLLIKDSLPLDLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQ 256
Query: 247 FQ 248
+Q
Sbjct: 257 YQ 258
>CGD|CAL0004730 [details] [associations]
symbol:orf19.4028 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0045547 "dehydrodolichyl
diphosphate synthase activity" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0019408 "dolichol
biosynthetic process" evidence=IEA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
CGD:CAL0004730 EMBL:AACQ01000012 eggNOG:COG0020 KO:K11778
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 EMBL:AACQ01000011
RefSeq:XP_721936.1 RefSeq:XP_722097.1 ProteinModelPortal:Q5AJZ3
STRING:Q5AJZ3 GeneID:3636267 GeneID:3636399 KEGG:cal:CaO19.11511
KEGG:cal:CaO19.4028 Uniprot:Q5AJZ3
Length = 328
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 102/237 (43%), Positives = 149/237 (62%)
Query: 18 KLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYA 77
+++ G VP+H+ IMDGNRRYAK + EGHS GFD +A L+ + GV+ TVYA
Sbjct: 24 RIIMTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKCATVYA 83
Query: 78 FSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKE 137
FSIENFKR++ EV LM+LA++KF ++ + E G++IRI+GN +LLP D++ ++
Sbjct: 84 FSIENFKRSQYEVKWLMELAKSKFTQINQHGLLCEEYGVKIRILGNTKLLPRDVLEILEK 143
Query: 138 AMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTS 197
ITK+NT LNV F YTSRDE+ + + ++D I D+T + D+ LYT
Sbjct: 144 TEEITKNNTRAVLNVCFPYTSRDEITHSIKSVVDEATKGGI---DITEEAIDRHLYTKDV 200
Query: 198 PEPDLIIRTSGETRLSDFMLVQSKSS--FLYFCHKLWPEFTAWNLINAVFAFQYDFY 252
P DL++RTSG RLSDF+L Q+ S + F KLWP F W+++ + + ++ Y
Sbjct: 201 PPLDLLVRTSGTFRLSDFLLWQTVSPECAVVFVDKLWPAFKPWDMLKILLNWGFNKY 257
>UNIPROTKB|E9PI09 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AL513365 HGNC:HGNC:20603 IPI:IPI00513958
ProteinModelPortal:E9PI09 SMR:E9PI09 Ensembl:ENST00000427245
ArrayExpress:E9PI09 Bgee:E9PI09 Uniprot:E9PI09
Length = 198
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 95/173 (54%), Positives = 129/173 (74%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGL 173
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGV 173
>UNIPROTKB|Q5T0A1 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AL513365 UniGene:Hs.369385 HGNC:HGNC:20603
IPI:IPI00514794 SMR:Q5T0A1 Ensembl:ENST00000374185
HOVERGEN:HBG058171 Uniprot:Q5T0A1
Length = 209
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 95/173 (54%), Positives = 129/173 (74%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGL 173
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGV 173
>UNIPROTKB|E9PR24 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AL513365 HGNC:HGNC:20603 IPI:IPI00977374
ProteinModelPortal:E9PR24 SMR:E9PR24 Ensembl:ENST00000533087
ArrayExpress:E9PR24 Bgee:E9PR24 Uniprot:E9PR24
Length = 166
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 93/162 (57%), Positives = 125/162 (77%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEM 162
+G++ LLP DL +A+ TK+ + FLNV F+YTSR E+
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEI 162
>UNIPROTKB|F1STT4 [details] [associations]
symbol:DHDDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016765 "transferase activity, transferring alkyl or
aryl (other than methyl) groups" evidence=IEA] InterPro:IPR001441
Pfam:PF01255 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GeneTree:ENSGT00390000007879
EMBL:FP236394 Ensembl:ENSSSCT00000003950 OMA:ATKNYNR Uniprot:F1STT4
Length = 180
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 94/173 (54%), Positives = 129/173 (74%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L++++ ++K G +PKHIAFIMDGNRRYA++ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSFWERFCANIIKAGPMPKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LGV EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EE++KL + G+ IR+
Sbjct: 61 TLRWCLNLGVLEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGL 173
+G++ LLP DL +A+ TK+ FLNV F+YTSR E+ R + G+
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNRCFLNVCFAYTSRHEISNAVREMAWGV 173
>ASPGD|ASPL0000029539 [details] [associations]
symbol:AN5600 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 EMBL:BN001305 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053
EnsemblFungi:CADANIAT00003477 OMA:FEVDALM Uniprot:C8VG05
Length = 403
Score = 383 (139.9 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 78/171 (45%), Positives = 115/171 (67%)
Query: 10 NWF------QYAIIKL-------LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFD 56
NWF +YAI KL +K+G VP+HIAFIMDGNRR+A+ +T+EGH+ GF+
Sbjct: 12 NWFLASPPIEYAISKLRDLLVGAIKQGPVPQHIAFIMDGNRRFARSHGIETVEGHNLGFE 71
Query: 57 KLAETLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGI 116
LA L+ C GV+ VT+YAFSIENFKR++ EV+ LM++AR K ++ + + L+ G
Sbjct: 72 ALARILEVCYRSGVQVVTIYAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGA 131
Query: 117 RIRIIGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSR 167
++RI+G ++LL D++A+ A+ +TK+N + LN+ F YTSRDE+ R
Sbjct: 132 KVRILGRLDLLRPDVLAAVNRAVDMTKNNGDRVLNICFPYTSRDEITGAIR 182
Score = 120 (47.3 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQS-KSSFLYFCHKLWPEFTAWN 239
E +T + T +P DL+IRTSG RLSDFML Q +++ + F LWPEF W+
Sbjct: 293 ETITRQTLADHMLTRDNPPLDLLIRTSGVERLSDFMLWQCHENTEIAFLDILWPEFDLWH 352
Query: 240 LINAVFAFQ 248
+ + +Q
Sbjct: 353 FLPVLLRWQ 361
>UNIPROTKB|G4NH37 [details] [associations]
symbol:MGG_12110 "Dehydrodolichyl diphosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 EMBL:CM001236
KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 RefSeq:XP_003719914.1
ProteinModelPortal:G4NH37 EnsemblFungi:MGG_12110T0 GeneID:2677333
KEGG:mgr:MGG_12110 Uniprot:G4NH37
Length = 351
Score = 355 (130.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 68/152 (44%), Positives = 100/152 (65%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+I L++G +P+H+AF MDGNRRYA+ +T+ GH GF+ LA L+ C + GV+ VTV
Sbjct: 30 LIGALRQGPIPRHVAFEMDGNRRYARSHKIETVAGHHMGFEALARVLEICYNCGVKVVTV 89
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFSIENF R + EV GLM +A+ K ++L+E + L+ G R+ I G +L+P D++
Sbjct: 90 YAFSIENFNRPKYEVEGLMQMAKYKLEQLLEHGEVLDRYGARVIISGQRDLIPPDVLGFV 149
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSR 167
A++ TK N LN+ F YTSR+E+ + R
Sbjct: 150 DRAVNETKHNKGHILNICFPYTSREEITQAIR 181
Score = 131 (51.2 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 181 EDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQS-KSSFLYFCHKLWPEFTAWN 239
E +T + + +YT P DL IRTSG RLSDFML Q + + ++F LWP+F W
Sbjct: 264 ETITAETLNNHMYTAECPPLDLFIRTSGVERLSDFMLWQCHQDTQIFFLKCLWPDFDLWY 323
Query: 240 LINAVFAFQY 249
+ + +Q+
Sbjct: 324 FLPVLVEWQW 333
>UNIPROTKB|E9PI64 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AL513365 HGNC:HGNC:20603 IPI:IPI00979475
ProteinModelPortal:E9PI64 SMR:E9PI64 Ensembl:ENST00000531312
ArrayExpress:E9PI64 Bgee:E9PI64 Uniprot:E9PI64
Length = 131
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 80/131 (61%), Positives = 106/131 (80%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IGNIELLPSDL 131
+G++ LLP DL
Sbjct: 121 LGDLHLLPLDL 131
>TIGR_CMR|BA_3961 [details] [associations]
symbol:BA_3961 "undecaprenyl diphosphate synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR eggNOG:COG0020
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF KO:K00806
RefSeq:NP_846204.1 RefSeq:YP_020600.2 RefSeq:YP_029925.1
ProteinModelPortal:Q81WL2 SMR:Q81WL2 DNASU:1086839
EnsemblBacteria:EBBACT00000010705 EnsemblBacteria:EBBACT00000014419
EnsemblBacteria:EBBACT00000024485 GeneID:1086839 GeneID:2819577
GeneID:2849350 KEGG:ban:BA_3961 KEGG:bar:GBAA_3961 KEGG:bat:BAS3674
ProtClustDB:PRK14830 BioCyc:BANT260799:GJAJ-3732-MONOMER
BioCyc:BANT261594:GJ7F-3849-MONOMER Uniprot:Q81WL2
Length = 258
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 91/234 (38%), Positives = 144/234 (61%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
+++ +KKG++P+HIA IMDGN R+AKR I GH +G + + ++ L V+ +T+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
YAFS EN+KR ++EV+ LM L + E L E+ +++R+IG + LP+ +
Sbjct: 80 YAFSTENWKRPKKEVDYLMQLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAM 136
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
++AM TK+NT LN A +Y SRDE+V + ++ K+ EDV+ ++ L T
Sbjct: 137 EKAMEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTS 196
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
+ P+P+L+IRTSGE R+S+FML Q S +F WP+FT +L+NA+ FQ+
Sbjct: 197 SLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQH 250
>SGD|S000000206 [details] [associations]
symbol:RER2 "Cis-prenyltransferase involved in dolichol
synthesis" species:4932 "Saccharomyces cerevisiae" [GO:0006486
"protein glycosylation" evidence=IEA;IDA;IMP] [GO:0005783
"endoplasmic reticulum" evidence=IEA;IDA] [GO:0004659
"prenyltransferase activity" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019408 "dolichol biosynthetic process" evidence=IDA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 SGD:S000000206 GO:GO:0005783 GO:GO:0005789
GO:GO:0006486 EMBL:BK006936 GO:GO:0006888 EMBL:Z26494
eggNOG:COG0020 KO:K11778 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:WATRRFL HOGENOM:HOG000006053
GO:GO:0019408 GeneTree:ENSGT00390000007879 EMBL:AB013497
EMBL:Z35871 PIR:S44561 RefSeq:NP_009556.1 ProteinModelPortal:P35196
SMR:P35196 IntAct:P35196 MINT:MINT-4476587 STRING:P35196
PaxDb:P35196 EnsemblFungi:YBR002C GeneID:852287 KEGG:sce:YBR002C
CYGD:YBR002c OrthoDB:EOG4XWK72 BioCyc:MetaCyc:MONOMER-14490
NextBio:970925 Genevestigator:P35196 GermOnline:YBR002C
GO:GO:0045547 Uniprot:P35196
Length = 286
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 96/254 (37%), Positives = 140/254 (55%)
Query: 9 LNWFQYAIIKLLKKGH-VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLD 67
L W + + L+ + VP+H+ FIMDGNRR+A++ EGH GF ++ L+ C +
Sbjct: 14 LKWTKNIFSRTLRASNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYE 73
Query: 68 LGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELL 127
GV TV+AFSIENFKR+ EV LM LAR + +++ E + + G+RI+IIG++ LL
Sbjct: 74 AGVDTATVFAFSIENFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLL 133
Query: 128 PSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDL 187
L+ + A+ TK+N LN+ F YT R+E++ + I + +E
Sbjct: 134 DKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAAIDEST---- 189
Query: 188 FDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQ--SKSSFLYFCHKLWPEF----TAWNLI 241
+ LYT P DL+IRTSG +RLSDF++ Q SK + LWPEF AW L+
Sbjct: 190 LESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILL 249
Query: 242 NAVFAFQYDFYTNE 255
F+F F E
Sbjct: 250 K--FSFHKSFLNKE 261
>TAIR|locus:2175183 [details] [associations]
symbol:cPT9 "cis-prenyltransferase 9" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 UniPathway:UPA00378 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006486 EMBL:AB011483
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 ProtClustDB:CLSN2686694 EMBL:AY087655
IPI:IPI00549051 RefSeq:NP_200859.1 UniGene:At.29156
UniGene:At.71243 ProteinModelPortal:Q8LAR7 SMR:Q8LAR7 STRING:Q8LAR7
PRIDE:Q8LAR7 EnsemblPlants:AT5G60510.1 GeneID:836172
KEGG:ath:AT5G60510 TAIR:At5g60510 InParanoid:Q8LAR7 OMA:MNNTREE
PhylomeDB:Q8LAR7 Genevestigator:Q8LAR7 GermOnline:AT5G60510
Uniprot:Q8LAR7
Length = 272
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 90/249 (36%), Positives = 147/249 (59%)
Query: 4 VVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIE-GHSKGFDKLAETL 62
+ ++ ++ + I K+L+ G +P +I+FIMDGNRR+AK+ N + ++ GH GF + L
Sbjct: 14 IFNALMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYIL 73
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
Q+C ++GV VT+YAF ++NFKR EEV +MDL K + I++ N G+RI G
Sbjct: 74 QYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAG 133
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDG-LRTNKITNE 181
++ L A+ K+ M +T++N + + V +Y++ E+V R D +R +K +
Sbjct: 134 DLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVR---DSCVRKSKTGDG 190
Query: 182 DVTMDLFD--KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWN 239
++L D +C+YT P PDL++RT G RLS+FM Q+ + L+ LWPE W+
Sbjct: 191 SSALELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWH 250
Query: 240 LINAVFAFQ 248
L+ A+ FQ
Sbjct: 251 LVWAILKFQ 259
>UNIPROTKB|E9PRS7 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AL513365 HGNC:HGNC:20603 IPI:IPI00980956
ProteinModelPortal:E9PRS7 SMR:E9PRS7 Ensembl:ENST00000525165
ArrayExpress:E9PRS7 Bgee:E9PRS7 Uniprot:E9PRS7
Length = 122
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 75/122 (61%), Positives = 99/122 (81%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
TL+WCL+LG+ EVTVYAFSIENFKR++ EV+GLMDLAR KF RL+EEK+KL + G+ IR+
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 IG 122
+G
Sbjct: 121 LG 122
>TAIR|locus:2175168 [details] [associations]
symbol:cPT8 "cis-prenyltransferase 8" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 UniPathway:UPA00378
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005789
GO:GO:0006486 EMBL:AB011483 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 EMBL:AY085488
IPI:IPI00539079 RefSeq:NP_200858.1 UniGene:At.29157
ProteinModelPortal:Q8LED0 SMR:Q8LED0 STRING:Q8LED0 PRIDE:Q8LED0
EnsemblPlants:AT5G60500.1 GeneID:836171 KEGG:ath:AT5G60500
TAIR:At5g60500 InParanoid:Q8LED0 OMA:DESTHIF PhylomeDB:Q8LED0
ProtClustDB:CLSN2686694 Genevestigator:Q8LED0 GermOnline:AT5G60500
Uniprot:Q8LED0
Length = 271
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 93/259 (35%), Positives = 149/259 (57%)
Query: 4 VVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIE-GHSKGFDKLAETL 62
+ ++ ++ + + ++L G +P +I+FIMDGNRR+AK+ N ++ GH GF + L
Sbjct: 13 IFNALMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYIL 72
Query: 63 QWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIG 122
Q+C ++GV VT++AF ++NFKR EEV +MDL K + I++ N G+RI G
Sbjct: 73 QYCKEIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAG 132
Query: 123 NIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNED 182
+++ L A+ K+ M +T++N + + V +Y++ E+V R K TN D
Sbjct: 133 DLDSLNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSC----VRKCTNGD 188
Query: 183 --VTMDLFD--KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAW 238
V ++L D +C+YT P PDL+IRT G RLS+FM Q+ S L+ LWPE W
Sbjct: 189 DLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLW 248
Query: 239 NLINAVFAFQ--YDFYTNE 255
+L+ A+ FQ D+ T +
Sbjct: 249 HLVWAILKFQRMQDYLTKK 267
>SGD|S000004707 [details] [associations]
symbol:SRT1 "Cis-prenyltransferase" species:4932
"Saccharomyces cerevisiae" [GO:0016740 "transferase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA;IDA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IMP;IDA] [GO:0045547 "dehydrodolichyl
diphosphate synthase activity" evidence=ISS;IDA] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 SGD:S000004707
GO:GO:0005811 GO:GO:0006486 EMBL:BK006946 EMBL:Z49807
eggNOG:COG0020 KO:K11778 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006053
GO:GO:0045547 EMBL:AB013498 PIR:S55087 RefSeq:NP_013819.1
ProteinModelPortal:Q03175 SMR:Q03175 DIP:DIP-4439N IntAct:Q03175
MINT:MINT-483050 STRING:Q03175 EnsemblFungi:YMR101C GeneID:855127
KEGG:sce:YMR101C CYGD:YMR101c OMA:PYTSRND OrthoDB:EOG46HKKZ
BioCyc:MetaCyc:MONOMER-14491 NextBio:978493 Genevestigator:Q03175
GermOnline:YMR101C Uniprot:Q03175
Length = 343
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 106/290 (36%), Positives = 161/290 (55%)
Query: 2 SWVVDSTL-NWF----QYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFD 56
+WV+ +L +WF Q +IK L+ G VP+H++FIMDGNRRYAK +GH G
Sbjct: 38 AWVMSLSLFSWFYVNLQNILIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGL 97
Query: 57 KLAETLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKF----KRLIEEKDKLN 112
L L C LGV+ V+ YAFSIENF R +EEV+ LM+L K KR + KD L
Sbjct: 98 TLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLY 157
Query: 113 EKGIRIRIIGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDG 172
G +IRI+G+ LL ++ K+ IT+D + L + F YTSR++M+ T R ++
Sbjct: 158 --GSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVED 215
Query: 173 LRTNKITNEDVTMDLFDKCLYTGT-SPEPDLIIRTSGETRLSDFMLVQ-SKSSFLYFCHK 230
NK + + + F +Y G S + +L+IRTSG RLSD+ML Q +++ + F
Sbjct: 216 HLENK--SPRINIRKFTNKMYMGFHSNKCELLIRTSGHRRLSDYMLWQVHENATIEFSDT 273
Query: 231 LWPEFTAWNLINAVFAFQYDFYTNEMWRADKSKSLTSAGEAFVNELYSKR 280
LWP F+ + + + + + F T + + +K+ SL V ++ K+
Sbjct: 274 LWPNFSFFAMYLMILKWSF-FSTIQKYN-EKNHSLFEKIHESVPSIFKKK 321
>TIGR_CMR|DET_0373 [details] [associations]
symbol:DET_0373 "undecaprenyl diphosphate synthase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0020 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006054 KO:K00806 GO:GO:0004659 OMA:FLWRIAY
RefSeq:YP_181119.1 ProteinModelPortal:Q3Z9I0 STRING:Q3Z9I0
GeneID:3230313 KEGG:det:DET0373 PATRIC:21607815
ProtClustDB:CLSK837523 BioCyc:DETH243164:GJNF-373-MONOMER
Uniprot:Q3Z9I0
Length = 236
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 92/223 (41%), Positives = 130/223 (58%)
Query: 26 PKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKR 85
P HIA IMDGN R+A+R ++GH G + + ++ LGV+ VT+Y+FS EN+KR
Sbjct: 12 PNHIAIIMDGNGRWAERRGLSRLDGHKAGLENARQIIRHLNSLGVKYVTLYSFSTENWKR 71
Query: 86 TEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKDN 145
+ E+ GL L I E L E +R++ +G+++ LPS L + + T N
Sbjct: 72 PDTEIKGLFGLINDIMSSYIPE---LVENNVRLKHLGHLDKLPSVLKDKLADLLSRTSRN 128
Query: 146 TEGFLNVAFSYTSRDEMVETSRILI-DGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
T L +AF Y RDE+++ + L+ DGL +KIT E+V FD LYT PE DL+I
Sbjct: 129 TGLTLCLAFDYGGRDEIIQAVKKLVKDGLAADKIT-ENV----FDGYLYTAGIPEADLVI 183
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
RT GE RLS+F+L QS S LYF +WP+F + NA+ AF
Sbjct: 184 RTGGEMRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDNAISAF 226
>TIGR_CMR|SPO_1665 [details] [associations]
symbol:SPO_1665 "undecaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000006056 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF
KO:K00806 GO:GO:0004659 RefSeq:YP_166904.1
ProteinModelPortal:Q5LSV1 GeneID:3194281 KEGG:sil:SPO1665
PATRIC:23376655 ProtClustDB:CLSK933597 Uniprot:Q5LSV1
Length = 243
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 86/219 (39%), Positives = 129/219 (58%)
Query: 23 GHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIEN 82
G P+H+A IMDGN R+A+ + GH G ++ E ++ C LG++ +T++AFS EN
Sbjct: 10 GSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPQLGIKYLTIFAFSTEN 69
Query: 83 FKRTEEEVNGLMDLARAKFKRLIEEKDK-LNEKGIRIRIIGNIELLPSDLIASFKEAMHI 141
+KRT+ EV GLM L F+R I ++ + L+ +G+R+R IG+ L + LIA
Sbjct: 70 WKRTQVEVAGLMSL----FRRYIAKETRALHARGVRVRFIGDRVRLDAKLIALMDTLEEQ 125
Query: 142 TKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPD 201
T++N L +A +Y RDE+ +R L + ++ EDV + + L T P+PD
Sbjct: 126 TRENDGVQLTIALNYGGRDEVARATRRLARDVAEGRLKPEDVDEETLPRYLDTRVLPDPD 185
Query: 202 LIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNL 240
L+IRTSGE R+S+F+L QS S F LWP+FTA L
Sbjct: 186 LVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTAEEL 224
>TIGR_CMR|CHY_1781 [details] [associations]
symbol:CHY_1781 "undecaprenyl diphosphate synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0020 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF
HOGENOM:HOG000006055 KO:K00806 GO:GO:0004659 RefSeq:YP_360601.1
ProteinModelPortal:Q3AB83 STRING:Q3AB83 GeneID:3728460
KEGG:chy:CHY_1781 PATRIC:21276673
BioCyc:CHYD246194:GJCN-1780-MONOMER Uniprot:Q3AB83
Length = 255
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 82/224 (36%), Positives = 133/224 (59%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P+HIA IMDGN R+AK+ GH G + + +++C L V +T+YAFS EN++
Sbjct: 23 MPRHIAIIMDGNGRWAKKRGMPRYFGHRAGVETVRRVVKFCAKLNVPYLTLYAFSTENWR 82
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R +EEVN LM+L + + +E D+LN +G+R+ +IG I LP + + + T
Sbjct: 83 RPQEEVNVLMNLL---VEYIEKETDELNREGVRLTVIGEISELPEKARIALAQGIEKTCH 139
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
N+ L +A +Y R E+VE +R + ++ K++ E + +F LYT P+PDL+I
Sbjct: 140 NSRLNLILALNYGGRREIVEAARKIAYEIKNGKLSPEQIDEKVFANYLYTKEFPDPDLLI 199
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
R SGE R+S+F+L Q S ++ LWP+F+ +L+ A+ +Q
Sbjct: 200 RPSGEIRISNFLLWQIAYSEIWLTDVLWPDFSEEHLLQAIKDYQ 243
>UNIPROTKB|Q97SR4 [details] [associations]
symbol:uppS "Isoprenyl transferase" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0046872 EMBL:AE005672
GenomeReviews:AE005672_GR eggNOG:COG0020 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 OMA:IAYSELF HOGENOM:HOG000006055 KO:K00806
ProtClustDB:PRK14830 PIR:F95030 RefSeq:NP_344799.1
ProteinModelPortal:Q97SR4 IntAct:Q97SR4
EnsemblBacteria:EBSTRT00000025342 GeneID:930065 KEGG:spn:SP_0261
PATRIC:19704855 ChEMBL:CHEMBL1075025 Uniprot:Q97SR4
Length = 252
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 84/227 (37%), Positives = 124/227 (54%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
VP HI IMDGN R+AK+ + GH G + L + LGV+ +TVYAFS EN+
Sbjct: 19 VPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFSTENWT 78
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R ++EV +M+L + + E L+ ++I++IG + LP + +A +TK+
Sbjct: 79 RPDQEVKFIMNLPVEFYDNYVPE---LHANNVKIQMIGETDRLPKQTFEALTKAEELTKN 135
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSP----EP 200
NT LN A +Y R E+ + +++ + KI D+T +L L+T P +P
Sbjct: 136 NTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRDP 195
Query: 201 DLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
DLIIRTSGE RLS+F+ Q S LYF LWP+F L A+ A+
Sbjct: 196 DLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAY 242
>UNIPROTKB|Q47SS3 [details] [associations]
symbol:Tfu_0456 "(2Z,6E)-farnesyl diphosphate synthase"
species:269800 "Thermobifida fusca YX" [GO:0033850 "Z-farnesyl
diphosphate synthase activity" evidence=IDA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0046872 eggNOG:COG0020 HOGENOM:HOG000006056
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:CP000088 GenomeReviews:CP000088_GR
GO:GO:0033850 KO:K12503 OMA:LYTRGQP RefSeq:YP_288517.1
ProteinModelPortal:Q47SS3 SMR:Q47SS3 STRING:Q47SS3 GeneID:3579521
KEGG:tfu:Tfu_0456 PATRIC:23901328 ProtClustDB:CLSK2768831
Uniprot:Q47SS3
Length = 254
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 86/241 (35%), Positives = 129/241 (53%)
Query: 12 FQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTI-EGHSKGFDKLAETLQWCLDLGV 70
++ + + L P+H+ I+DGNRR+A+ S + EGH G +K+ E L WC ++GV
Sbjct: 12 YERRLERALSNAPKPRHVGVILDGNRRWARLSGLSSPKEGHRAGAEKIFELLDWCDEVGV 71
Query: 71 REVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSD 130
+ VT++ S +N R EE+ L ++ +RL E G R+ +G ++LLP+
Sbjct: 72 QVVTLWLLSTDNLARPPEELEPLFEIIENTVRRLCNE-------GRRVNPMGALDLLPAS 124
Query: 131 LIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVT--MDLF 188
KEA T+ N +NVA Y R E+ + R L+ T E++ +DL
Sbjct: 125 TAQVMKEAGTTTERNPGLLVNVAVGYGGRREIADAVRSLLLEEAAKGTTLEELAERLDLD 184
Query: 189 D--KCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFA 246
D K LYT P+PDL+IRTSGE RLS F+L QS S YFC WP F + + A+ +
Sbjct: 185 DIAKHLYTRGQPDPDLLIRTSGEQRLSGFLLWQSAHSEFYFCEVFWPAFRKIDFLRALRS 244
Query: 247 F 247
+
Sbjct: 245 Y 245
>TAIR|locus:505006702 [details] [associations]
symbol:AT5G58784 species:3702 "Arabidopsis thaliana"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0019408 "dolichol
biosynthetic process" evidence=IGI;RCA] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IGI]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005789 GO:GO:0006486 EMBL:AB020755
eggNOG:COG0020 HOGENOM:HOG000006056 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AK220649 IPI:IPI00522830 RefSeq:NP_568884.4
UniGene:At.51437 ProteinModelPortal:Q570Q8 SMR:Q570Q8 STRING:Q570Q8
PRIDE:Q570Q8 EnsemblPlants:AT5G58784.1 GeneID:835994
KEGG:ath:AT5G58784 TAIR:At5g58784 InParanoid:Q570Q8 OMA:ARETSEN
PhylomeDB:Q570Q8 ProtClustDB:CLSN2927464 Genevestigator:Q570Q8
GermOnline:AT5G58784 Uniprot:Q570Q8
Length = 302
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 85/232 (36%), Positives = 127/232 (54%)
Query: 21 KKGH--VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAF 78
K+G +PKH+A I+DGNRR+A++ T EGH G +L E + C +G ++++AF
Sbjct: 64 KRGRNIMPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAF 123
Query: 79 SIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEA 138
S EN++R E+EV LM L K L + L I+I +IGN LP L+ +E
Sbjct: 124 STENWERPEDEVKCLMALFE---KYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEV 180
Query: 139 MHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTS- 197
TK L +A Y+ R ++++ + L + ++ I ED+ +K L T S
Sbjct: 181 EEATKSYEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSE 240
Query: 198 -PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
P PDL+IRTSGE R+S+F L QS + LYF LWP+F + A+ +Q
Sbjct: 241 FPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWYQ 292
>TAIR|locus:2178838 [details] [associations]
symbol:cPT5 "cis -prenyltransferase 5" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0019408 "dolichol biosynthetic process"
evidence=IGI;RCA] [GO:0045547 "dehydrodolichyl diphosphate synthase
activity" evidence=IGI] [GO:0002094 "polyprenyltransferase
activity" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0009409 "response to cold" evidence=IEP]
[GO:0050267 "rubber cis-polyprenylcistransferase activity"
evidence=IGI] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 UniPathway:UPA00378 GO:GO:0005783 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009409 GO:GO:0006486 EMBL:AB020755
eggNOG:COG0020 HOGENOM:HOG000006056 KO:K11778
ProtClustDB:CLSN2688364 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AY090344 EMBL:BT004518
IPI:IPI00538944 RefSeq:NP_568882.1 UniGene:At.29264
ProteinModelPortal:Q8RX73 SMR:Q8RX73 STRING:Q8RX73
EnsemblPlants:AT5G58780.1 GeneID:835992 KEGG:ath:AT5G58780
TAIR:At5g58780 InParanoid:Q8RX73 OMA:RTICDIE PhylomeDB:Q8RX73
Genevestigator:Q8RX73 GermOnline:AT5G58780 GO:GO:0050267
Uniprot:Q8RX73
Length = 302
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 81/238 (34%), Positives = 132/238 (55%)
Query: 14 YAI-IKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVRE 72
Y + ++ L++ +P+H+A IMDGNRR+AKR+ T +GH G +L E + C LG+
Sbjct: 58 YVVGVEELQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHT 117
Query: 73 VTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLI 132
V+ +AFS EN+ R + EV LM L + K I+ + R+ +IGN+ +P L+
Sbjct: 118 VSAFAFSTENWGRHKIEVKCLMSLIQHYLKSKIQY---FQREETRVSVIGNLTKIPESLL 174
Query: 133 ASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCL 192
+ +E T+ + L +A Y+ R +++ + ++ I EDV L ++ L
Sbjct: 175 RTVQEIEEATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIEREL 234
Query: 193 YTGTS--PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
T + P PDL+IRTSGE R+S+F L Q + L+F LWP+F L+ A+ ++Q
Sbjct: 235 LTNCTEFPSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQ 292
>TAIR|locus:2046867 [details] [associations]
symbol:CPT "cis-prenyltransferase" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA] [GO:0019408
"dolichol biosynthetic process" evidence=IGI;RCA] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IGI]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 EMBL:AC003040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0006486 EMBL:AF162441
EMBL:AJ277136 IPI:IPI00523947 PIR:T01130 PIR:T52648
RefSeq:NP_565551.1 UniGene:At.10003 ProteinModelPortal:O80458
SMR:O80458 STRING:O80458 PRIDE:O80458 EnsemblPlants:AT2G23410.1
GeneID:816873 KEGG:ath:AT2G23410 GeneFarm:5073 TAIR:At2g23410
eggNOG:COG0020 HOGENOM:HOG000006056 InParanoid:O80458 KO:K11778
OMA:FTERMWP PhylomeDB:O80458 ProtClustDB:CLSN2688364
Genevestigator:O80458 GermOnline:AT2G23410 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 Uniprot:O80458
Length = 303
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 80/231 (34%), Positives = 127/231 (54%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L++ +P+H+AFI+DGNRR+AKR+ T +GH G +L + + C +LGV V+ +AFS
Sbjct: 65 LQRELMPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFS 124
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
EN+ R + E++ LM L + ++ K + +R+ +IGN +P L+ E
Sbjct: 125 TENWGRDKIEIDNLMSLIQ-HYRNKSNIKF-FHRSEVRVSVIGNKTKIPESLLKEIHEIE 182
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTS-- 197
TK L +A Y+ + +++ + L+ I EDV L ++ L T S
Sbjct: 183 EATKGYKNKHLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDF 242
Query: 198 PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
P PDL+IRTSGE R+S+F L Q S L+F WP+F L+ A+ ++Q
Sbjct: 243 PSPDLMIRTSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQ 293
>TAIR|locus:505006701 [details] [associations]
symbol:cPT6 "cis-prenyltransferase 6" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0019408 "dolichol biosynthetic process"
evidence=IGI;RCA] [GO:0045547 "dehydrodolichyl diphosphate synthase
activity" evidence=IGI] InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 UniPathway:UPA00378 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005789 GO:GO:0006486
EMBL:AB020755 eggNOG:COG0020 HOGENOM:HOG000006056 KO:K11778
ProtClustDB:CLSN2688364 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AK117939
EMBL:BT005285 EMBL:AY084601 IPI:IPI00521128 RefSeq:NP_568883.1
UniGene:At.29263 ProteinModelPortal:Q8GY03 SMR:Q8GY03 IntAct:Q8GY03
STRING:Q8GY03 PaxDb:Q8GY03 PRIDE:Q8GY03 EnsemblPlants:AT5G58782.1
GeneID:835993 KEGG:ath:AT5G58782 TAIR:At5g58782 InParanoid:Q8GY03
OMA:GACKNIV PhylomeDB:Q8GY03 Genevestigator:Q8GY03
GermOnline:AT5G58782 Uniprot:Q8GY03
Length = 289
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 83/234 (35%), Positives = 130/234 (55%)
Query: 18 KLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYA 77
K L++ +P+H+A IMDGNRR+AK++ T +G+ G +L E C LG+ V+ +A
Sbjct: 50 KELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFA 109
Query: 78 FSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKL-NEKGIRIRIIGNIELLPSDLIASFK 136
FS EN+ R + EV LM L F+R ++ K + K IR+ +IGN+ +P L+ +
Sbjct: 110 FSTENWGRHKIEVKCLMYL----FQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVH 165
Query: 137 EAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGT 196
E TK + L +A Y+ R +++ + ++ I EDV LF++ L T
Sbjct: 166 ELEEATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRC 225
Query: 197 S--PEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
+ P PDL+IRTSGE R+S+F L Q + +F LWP+F I A+ ++Q
Sbjct: 226 TEFPSPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQ 279
>UNIPROTKB|Q9KPV6 [details] [associations]
symbol:uppS "Ditrans,polycis-undecaprenyl-diphosphate
synthase ((2E,6E)-farnesyl-diphosphate specific)" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0008360
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009252
eggNOG:COG0020 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF KO:K00806
GO:GO:0008834 PIR:F82099 RefSeq:NP_231887.1
ProteinModelPortal:Q9KPV6 SMR:Q9KPV6 DNASU:2613178 GeneID:2613178
KEGG:vch:VC2256 PATRIC:20083555 ProtClustDB:CLSK2517517
Uniprot:Q9KPV6
Length = 250
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 82/228 (35%), Positives = 127/228 (55%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L + +PKHIA IMDGN R+AK + GH G + +T+ LG++ VT++AFS
Sbjct: 6 LSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFS 65
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
EN++R EEEV LM+L L E KL++ +R+R+IG+ L +A
Sbjct: 66 SENWRRPEEEVGVLMELFMTV---LSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAE 122
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPE 199
+T NT +N+A +Y + ++++ ++ L + + ++ D+ D+F + L P+
Sbjct: 123 QLTASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPD 182
Query: 200 PDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
DL+IRTSGE R+S+FML Q + +YF WPEF LI AV F
Sbjct: 183 VDLLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWF 230
>TIGR_CMR|VC_2256 [details] [associations]
symbol:VC_2256 "undecaprenyl diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0008360
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009252
eggNOG:COG0020 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF KO:K00806
GO:GO:0008834 PIR:F82099 RefSeq:NP_231887.1
ProteinModelPortal:Q9KPV6 SMR:Q9KPV6 DNASU:2613178 GeneID:2613178
KEGG:vch:VC2256 PATRIC:20083555 ProtClustDB:CLSK2517517
Uniprot:Q9KPV6
Length = 250
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 82/228 (35%), Positives = 127/228 (55%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L + +PKHIA IMDGN R+AK + GH G + +T+ LG++ VT++AFS
Sbjct: 6 LSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFS 65
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
EN++R EEEV LM+L L E KL++ +R+R+IG+ L +A
Sbjct: 66 SENWRRPEEEVGVLMELFMTV---LSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAE 122
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPE 199
+T NT +N+A +Y + ++++ ++ L + + ++ D+ D+F + L P+
Sbjct: 123 QLTASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPD 182
Query: 200 PDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
DL+IRTSGE R+S+FML Q + +YF WPEF LI AV F
Sbjct: 183 VDLLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWF 230
>TIGR_CMR|GSU_1917 [details] [associations]
symbol:GSU_1917 "undecaprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR
eggNOG:COG0020 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF
KO:K00806 ProtClustDB:PRK14830 RefSeq:NP_952966.1
ProteinModelPortal:P60482 GeneID:2686735 KEGG:gsu:GSU1917
PATRIC:22026699 BioCyc:GSUL243231:GH27-1968-MONOMER Uniprot:P60482
Length = 246
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 82/225 (36%), Positives = 126/225 (56%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P+H+A IMDGN R+A+ I GH KG + + ++ C LG+ +T++AFS EN+
Sbjct: 9 LPRHLAIIMDGNGRWAQERMLTRIIGHQKGVETVRIIVEECSRLGIGYLTLFAFSAENWL 68
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R + EV LM L + K + E +++ IR +IGN + LP D+ + + A+ T
Sbjct: 69 RPKTEVKALMALLK---KYIASEAARMDANNIRFNVIGNRDELPPDVNKAVQGAIDRTSG 125
Query: 145 NTEGFLNVAFSYTSRDE-MVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLI 203
NT L +A SY +R E M +RI D + + + +D++ F L+T P+PD +
Sbjct: 126 NTGMILTLALSYGARQEIMTAATRIASD-IASGVLKADDLSETAFASYLFTSGLPDPDFL 184
Query: 204 IRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
IRTSGE R+S+F+L Q + YF WPEFT L A+ +Q
Sbjct: 185 IRTSGEMRISNFLLWQLAYTEFYFSSVNWPEFTPEELYRALSDYQ 229
>TAIR|locus:2178823 [details] [associations]
symbol:cPT4 "cis-prenyltransferase 4" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0019408 "dolichol biosynthetic process"
evidence=IGI] [GO:0045547 "dehydrodolichyl diphosphate synthase
activity" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=RCA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0006486 EMBL:AB020755 eggNOG:COG0020 KO:K11778
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AK221512 IPI:IPI00544521 IPI:IPI00651111
RefSeq:NP_200685.1 UniGene:At.50538 ProteinModelPortal:Q56Y11
SMR:Q56Y11 STRING:Q56Y11 PaxDb:Q56Y11 PRIDE:Q56Y11
EnsemblPlants:AT5G58770.1 GeneID:835991 KEGG:ath:AT5G58770
TAIR:At5g58770 HOGENOM:HOG000006054 InParanoid:Q56Y11 OMA:WATRRFL
PhylomeDB:Q56Y11 ProtClustDB:CLSN2914842 Genevestigator:Q56Y11
GermOnline:AT5G58770 Uniprot:Q56Y11
Length = 310
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 81/227 (35%), Positives = 131/227 (57%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+PKH+A IMDGN R+AK + +GH G + L E ++ C G++ +TV+AFS +N+
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 85 RTEEEVNGLMDLARAKFKRLIE-EKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
R E++ L L F+R ++ E L + +RI IIG+ LP L+ E +TK
Sbjct: 137 RPRIEIDFLFSL----FERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTK 192
Query: 144 DNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTS--PEPD 201
+NT L VA Y+ + ++++ R + ++ +I E++ L ++ L T + P PD
Sbjct: 193 NNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELETNCTEFPYPD 252
Query: 202 LIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
L+IRTSGE R+S+F+L Q + L+F +LWP+F I A+ +FQ
Sbjct: 253 LLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQ 299
>TIGR_CMR|CBU_1382 [details] [associations]
symbol:CBU_1382 "undecaprenyl diphosphate synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0008360 GO:GO:0046872 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009252 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF KO:K00806
GO:GO:0008834 RefSeq:NP_820371.1 ProteinModelPortal:Q83BV5
PRIDE:Q83BV5 GeneID:1209288 KEGG:cbu:CBU_1382 PATRIC:17931509
ProtClustDB:CLSK914745 BioCyc:CBUR227377:GJ7S-1370-MONOMER
Uniprot:Q83BV5
Length = 237
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 72/211 (34%), Positives = 124/211 (58%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P+H+A +MDGN R+A R + GH G + +++ + + +T++AFSIEN
Sbjct: 2 IPRHVAIVMDGNGRWANRRGLPRVAGHRAGAKVVRRIVEYAAEKPLEVLTLFAFSIENRA 61
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R + EVN LM L K+ EE L++ +++R+IG+ ++A + + +TK
Sbjct: 62 RPQSEVNFLMSLFLDSLKKNTEE---LHKNNVQLRVIGDHREFDKKMLAQIQTSQDLTKH 118
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
NT L +A +Y+ R ++++ + + + ++ ++T+E ++ +LF L PEPDL+I
Sbjct: 119 NTGLKLIIALNYSGRWDILQAVQRMAEKIKNQELTSELMSAELFQNYLCLSDLPEPDLLI 178
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEF 235
RTSGE RLS+FML Q + +YF LWP+F
Sbjct: 179 RTSGEQRLSNFMLWQFAYTEIYFTPALWPDF 209
>UNIPROTKB|A0R2W4 [details] [associations]
symbol:uppS "(2Z,6E)-farnesyl diphosphate synthase"
species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0000287
"magnesium ion binding" evidence=ISS] [GO:0016094 "polyprenol
biosynthetic process" evidence=ISS] [GO:0033850 "Z-farnesyl
diphosphate synthase activity" evidence=IDA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0005886 GO:GO:0000287 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0016094 eggNOG:COG0020
HOGENOM:HOG000006056 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GO:GO:0033850
RefSeq:YP_006569857.1 RefSeq:YP_889502.1 ProteinModelPortal:A0R2W4
SMR:A0R2W4 STRING:A0R2W4 EnsemblBacteria:EBMYCT00000044347
GeneID:13425953 GeneID:4532700 KEGG:msg:MSMEI_5118
KEGG:msm:MSMEG_5256 PATRIC:18082797 KO:K12503 OMA:LYTRGQP
ProtClustDB:CLSK790942 BioCyc:MSME246196:GJ4Y-5255-MONOMER
Uniprot:A0R2W4
Length = 263
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 80/229 (34%), Positives = 124/229 (54%)
Query: 22 KGHVPKHIAFIMDGNRRYAKRSNAKTIE-GHSKGFDKLAETLQWCLDLGVREVTVYAFSI 80
K +P+HIA + DGNRR+A+ + + G+ KG K+AE L+WC G+ T+Y S
Sbjct: 28 KAQLPRHIAVLCDGNRRWARDAGYDDVSIGYRKGAAKIAEMLRWCQAAGIEMATIYLLST 87
Query: 81 ENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMH 140
EN +R +E+ L+++ + + +K + +R +G++ELL + +EA+
Sbjct: 88 ENLQRDPDELTALIEIITDVVEEICAPYNKWS-----VRTVGDLELLGDEPARRLREAVE 142
Query: 141 ITKDNTEGF-LNVAFSYTSRDEMVETSRILIDGLRTNKITNED----VTMDLFDKCLYTG 195
T F +NVA +Y R E+V+ R L+ N T E VT+D + LYT
Sbjct: 143 STTTKGANFHVNVAVAYGGRQEIVDAVRSLLSKELANGATAEQLIEAVTVDGISENLYTS 202
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
P+PDL+IRTSGE RLS F+L QS S ++F WP F + + A+
Sbjct: 203 GQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 251
>TAIR|locus:2053903 [details] [associations]
symbol:cPT1 "cis-prenyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 UniPathway:UPA00378 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006486 EMBL:AC007584
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AF387010
EMBL:AY072510 EMBL:AF499435 EMBL:AY954789 IPI:IPI00545370
PIR:G84553 RefSeq:NP_565420.1 UniGene:At.14588
ProteinModelPortal:Q8S2T1 SMR:Q8S2T1 STRING:Q8S2T1 PaxDb:Q8S2T1
PRIDE:Q8S2T1 EnsemblPlants:AT2G17570.1 GeneID:816264
KEGG:ath:AT2G17570 TAIR:At2g17570 HOGENOM:HOG000006053
InParanoid:Q8S2T1 OMA:IRVYFIG PhylomeDB:Q8S2T1
ProtClustDB:CLSN2688205 Genevestigator:Q8S2T1 GermOnline:AT2G17570
Uniprot:Q8S2T1
Length = 295
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 71/191 (37%), Positives = 113/191 (59%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MS +++ + + ++ +++ G +P HIAFIMDGNRRYAK+ GH GF L
Sbjct: 15 MSQLLEQIYGFSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMS 74
Query: 61 TLQWCLDLGVREVTVYAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRI 120
LQ+C +LG++ VT+YAFSI+NF+R EEV +MDL K K L+E++ +++ GIR+
Sbjct: 75 MLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYF 134
Query: 121 IGNIELLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVET-SRILI---DGLRTN 176
IGN+ LL + A+ ++ M T N+ L + +Y S DE+V+ + I D + +
Sbjct: 135 IGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEAS 194
Query: 177 KITNEDVTMDL 187
+ED D+
Sbjct: 195 NYKHEDSDSDI 205
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 92 GLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSD-LIASFKEAMHITKDNTEGFL 150
G + L + + E+ K K R+ ++ I +D ++ + K++ DN E
Sbjct: 136 GNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIE--- 192
Query: 151 NVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFD--KCLYTGTSPEPDLIIRTSG 208
A +Y D + I+G T+ + N++ + L D + + +P PD++IR+SG
Sbjct: 193 --ASNYKHEDSDSD-----IEG--TD-MENQEKKIQLVDIEENMQMSVAPNPDILIRSSG 242
Query: 209 ETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
ETRLS+F+L Q+ ++ L LWPE +L+ A+ FQ
Sbjct: 243 ETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAILNFQ 282
>UNIPROTKB|Q47RM6 [details] [associations]
symbol:Tfu_0853 "Trans,polycis-polyprenyl diphosphate
synthase ((2Z,6E)-farnesyl diphosphate specific)" species:269800
"Thermobifida fusca YX" [GO:0004659 "prenyltransferase activity"
evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0046872 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:CP000088 RefSeq:YP_288914.1
ProteinModelPortal:Q47RM6 SMR:Q47RM6 STRING:Q47RM6 GeneID:3579635
GenomeReviews:CP000088_GR KEGG:tfu:Tfu_0853 PATRIC:23902172
HOGENOM:HOG000006055 KO:K00806 OMA:ETLRWCK ProtClustDB:CLSK2769046
BioCyc:MetaCyc:MONOMER-15682 GO:GO:0004659 Uniprot:Q47RM6
Length = 282
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 76/211 (36%), Positives = 116/211 (54%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P+H+A +MDGN R+AK+ EGH G L + ++ L+LGV ++ YAFS EN+K
Sbjct: 35 IPRHVAIVMDGNGRWAKQRGLPRTEGHKAGESSLFDVIEGALELGVPYLSAYAFSTENWK 94
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R+ +EV LM R +R +D+L+ +G+R+R G L +I EA +TK
Sbjct: 95 RSPDEVRFLMGFNRDVIRR---RRDELHARGVRVRWAGRPGRLWKSVIKELTEAEELTKH 151
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
NT+ L +Y R E+ + + L + +++ VT + LY P+ DL I
Sbjct: 152 NTKLTLQFCVNYGGRAEIADAAAALARDVAAGRLSPNRVTEATLARYLYHPDIPDVDLFI 211
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEF 235
R+SGE RLS+F+L QS + F LWP+F
Sbjct: 212 RSSGEQRLSNFLLWQSSYAEFVFLDTLWPDF 242
>UNIPROTKB|A0R0S4 [details] [associations]
symbol:uppS "Decaprenyl diphosphate synthase"
species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IDA]
[GO:0033850 "Z-farnesyl diphosphate synthase activity"
evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0005886 GO:GO:0046872
EMBL:CP000480 EMBL:CP001663 GenomeReviews:CP000480_GR
eggNOG:COG0020 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006055 OMA:ETLRWCK
RefSeq:YP_006569128.1 RefSeq:YP_888762.1 ProteinModelPortal:A0R0S4
SMR:A0R0S4 STRING:A0R0S4 EnsemblBacteria:EBMYCT00000044980
GeneID:13430895 GeneID:4535408 KEGG:msg:MSMEI_4379
KEGG:msm:MSMEG_4490 PATRIC:18081315 KO:K14215 ProtClustDB:PRK14827
BioCyc:MSME246196:GJ4Y-4489-MONOMER GO:GO:0008834 GO:GO:0033850
Uniprot:A0R0S4
Length = 293
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 77/211 (36%), Positives = 116/211 (54%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
VP H+A +MDGN R+A + EGH G L + +++G++ +TVYAFS EN+K
Sbjct: 64 VPNHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWK 123
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R+ EEV LM R +R ++ LN+ G+R+R +G+ + +I F A +T D
Sbjct: 124 RSTEEVRFLMGFNREVVRR---RRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEQMTVD 180
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
N +N +Y R E+VE +R L KI ++ +F K L+ P+ DL I
Sbjct: 181 NDVITINYCVNYGGRTEIVEAARALAQEAVDGKINPARISEAMFAKHLHRADIPDVDLFI 240
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEF 235
RTSGE R S+F+L Q+ + F KLWP++
Sbjct: 241 RTSGEQRASNFLLWQAAYAEYVFQDKLWPDY 271
>TIGR_CMR|NSE_0944 [details] [associations]
symbol:NSE_0944 "undecaprenyl diphosphate synthase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0020 HOGENOM:HOG000006056
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 OMA:IAYSELF KO:K00806 GO:GO:0004659
RefSeq:YP_506808.1 ProteinModelPortal:Q2GCI8 STRING:Q2GCI8
GeneID:3931651 KEGG:nse:NSE_0944 PATRIC:22681867
ProtClustDB:CLSK2528182 BioCyc:NSEN222891:GHFU-946-MONOMER
Uniprot:Q2GCI8
Length = 230
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 80/225 (35%), Positives = 124/225 (55%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P HIA IMDGN R+A+ +G+ G + ++ + G+R +T++ FS EN+K
Sbjct: 6 LPVHIAIIMDGNARWARARGLCNSDGYKMGVEAAFSAVRASCNAGIRYLTLFLFSTENWK 65
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R ++V+ + + K + D+L + I++++IG L K T
Sbjct: 66 RNPDDVHLVFSIFE---KASVTALDELCDANIKVKVIGEQVGLGESAKQVIKNLESGTAK 122
Query: 145 NTEGFLNVAFSYTSRDEMVET-SRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLI 203
N+ +L A +Y R E++ SR++ DGLR E+V + F LYT P+PDLI
Sbjct: 123 NSGMYLCFALNYGGRSEIINAVSRMISDGLRA-----EEVDVQKFASYLYTDGIPDPDLI 177
Query: 204 IRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
IRT+GE RLS+F+L QS S LYFC LWP+FT +L A+ A++
Sbjct: 178 IRTAGEKRLSNFLLWQSSYSELYFCDTLWPDFTEKDLEIAMEAYK 222
>TIGR_CMR|SO_1633 [details] [associations]
symbol:SO_1633 "undecaprenyl diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0008360 GO:GO:0046872 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009252 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 KO:K00806 OMA:ETLRWCK
GO:GO:0008834 RefSeq:NP_717244.1 ProteinModelPortal:Q8EGH1
SMR:Q8EGH1 GeneID:1169427 KEGG:son:SO_1633 PATRIC:23522900
ProtClustDB:CLSK2516782 Uniprot:Q8EGH1
Length = 275
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 75/232 (32%), Positives = 127/232 (54%)
Query: 16 IIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTV 75
++ L K +PKH+A IMDGN R+A+ + GH G + + LG++ +T+
Sbjct: 27 VLPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTL 86
Query: 76 YAFSIENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASF 135
+AFS EN++R ++EV+ LM+L +R I+ DK N+ +++ IIG+I + L
Sbjct: 87 FAFSSENWRRPDKEVSLLMELFFTVLQREIKLLDK-NQ--VKLNIIGDISRFSARLQKQI 143
Query: 136 KEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTG 195
+ A T N+ LNVA +Y R ++++ ++ L + + T ++T+ T + + L
Sbjct: 144 RAAEEKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQ 203
Query: 196 TSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
E DLIIRT G+ R+S+F+L Q+ + L F LWP+F A+ F
Sbjct: 204 NQSEVDLIIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATF 255
>UNIPROTKB|O53434 [details] [associations]
symbol:MT1118 "(2Z,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016094 "polyprenol
biosynthetic process" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033850 "Z-farnesyl diphosphate synthase
activity" evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0005829
GO:GO:0005886 EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 GO:GO:0030145 GO:GO:0016094
eggNOG:COG0020 HOGENOM:HOG000006056 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GO:GO:0033850
KO:K12503 OMA:LYTRGQP ProtClustDB:CLSK790942 PIR:D70895
RefSeq:NP_215602.1 RefSeq:NP_335560.1 RefSeq:YP_006514453.1
PDB:2VFW PDB:2VG0 PDB:2VG1 PDBsum:2VFW PDBsum:2VG0 PDBsum:2VG1
ProteinModelPortal:O53434 SMR:O53434 PRIDE:O53434
EnsemblBacteria:EBMYCT00000001974 EnsemblBacteria:EBMYCT00000072951
GeneID:13319656 GeneID:887097 GeneID:925064 KEGG:mtc:MT1118
KEGG:mtu:Rv1086 KEGG:mtv:RVBD_1086 PATRIC:18124210
TubercuList:Rv1086 BioCyc:MetaCyc:MONOMER-15204
EvolutionaryTrace:O53434 Uniprot:O53434
Length = 262
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 74/228 (32%), Positives = 121/228 (53%)
Query: 22 KGHVPKHIAFIMDGNRRYAKRSNAKTIE-GHSKGFDKLAETLQWCLDLGVREVTVYAFSI 80
K +P+HIA + DGNRR+A+ + + G+ G K+AE L+WC + G+ TVY S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 81 ENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMH 140
EN +R +E+ L+++ + + + + +R +G++ L+ + + A+
Sbjct: 88 ENLQRDPDELAALIEIITDVVEEICAPANHWS-----VRTVGDLGLIGEEPARRLRGAVE 142
Query: 141 ITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNED----VTMDLFDKCLYTGT 196
T + +NVA Y R E+V+ R L+ N T E+ VT++ + LYT
Sbjct: 143 STPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSG 202
Query: 197 SPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAV 244
P+PDL+IRTSGE RLS F+L QS S ++F WP F + + A+
Sbjct: 203 QPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRAL 250
>TIGR_CMR|CPS_1557 [details] [associations]
symbol:CPS_1557 "undecaprenyl diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0008360 GO:GO:0000287 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0009252 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 KO:K00806 GO:GO:0008834
OMA:FLWRIAY RefSeq:YP_268299.1 ProteinModelPortal:Q485G6 SMR:Q485G6
STRING:Q485G6 GeneID:3519873 KEGG:cps:CPS_1557 PATRIC:21466321
BioCyc:CPSY167879:GI48-1638-MONOMER Uniprot:Q485G6
Length = 254
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 65/225 (28%), Positives = 124/225 (55%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+P+H+A IMDGN R+A+ + GH G + + + + V+ +T++AFS EN++
Sbjct: 16 IPQHVAIIMDGNGRWAQLQGKGRVAGHKAGVESVRQVVATARKSNVKALTLFAFSSENWQ 75
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKD 144
R +EV+ LMDL L +E +L++ IR +++G++ L + ++ +T D
Sbjct: 76 RPAKEVSVLMDLFMYV---LTKEVKRLHKHNIRFQVVGDLSRFSDKLQKNIAKSEQLTAD 132
Query: 145 NTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLII 204
NT L++A +Y R ++ + ++ L ++ ++ +D+ + ++ P DL+I
Sbjct: 133 NTGLVLSIAANYGGRWDIAQAAKKLASDVKQGTMSLDDINEETLNEHTCLANLPTLDLLI 192
Query: 205 RTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQY 249
RT G+ R+S+F+L Q+ + LYF LWP+F + A+ F +
Sbjct: 193 RTGGDYRISNFLLWQAAYAELYFTDTLWPDFNEVQFLEAMSCFDH 237
>UNIPROTKB|P60479 [details] [associations]
symbol:uppS "Decaprenyl diphosphate synthase" species:1773
"Mycobacterium tuberculosis" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IDA]
[GO:0016094 "polyprenol biosynthetic process" evidence=IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0033850
"Z-farnesyl diphosphate synthase activity" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0000287 GO:GO:0030145 EMBL:BX842579 GO:GO:0016094
eggNOG:COG0020 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GO:GO:0050347
HOGENOM:HOG000006055 OMA:ETLRWCK KO:K14215 ProtClustDB:PRK14827
GO:GO:0008834 GO:GO:0033850 PIR:H70585 RefSeq:NP_216877.1
RefSeq:NP_336910.1 RefSeq:YP_006515795.1 PDB:2VG2 PDB:2VG3 PDB:2VG4
PDBsum:2VG2 PDBsum:2VG3 PDBsum:2VG4 ProteinModelPortal:P60479
SMR:P60479 PRIDE:P60479 EnsemblBacteria:EBMYCT00000003474
EnsemblBacteria:EBMYCT00000071422 GeneID:13319067 GeneID:888964
GeneID:925908 KEGG:mtc:MT2430 KEGG:mtu:Rv2361c KEGG:mtv:RVBD_2361c
PATRIC:18127094 TubercuList:Rv2361c BioCyc:MetaCyc:MONOMER-15221
EvolutionaryTrace:P60479 Uniprot:P60479
Length = 296
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 74/212 (34%), Positives = 116/212 (54%)
Query: 25 VPKHIAFIMDGNRRYA-KRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENF 83
+P H+A +MDGN R+A +R A+T EGH G + + ++LG++ +++YAFS EN+
Sbjct: 67 LPNHVAIVMDGNGRWATQRGLART-EGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENW 125
Query: 84 KRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
KR+ EEV LM R +R +D L + G+RIR +G+ L +I A +TK
Sbjct: 126 KRSPEEVRFLMGFNRDVVRR---RRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTK 182
Query: 144 DNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLI 203
N +N +Y R E+ E +R + + ++ E +T + L P+ DL
Sbjct: 183 SNDVITINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVDLF 242
Query: 204 IRTSGETRLSDFMLVQSKSSFLYFCHKLWPEF 235
+RTSGE R S+FML Q+ + F KLWP++
Sbjct: 243 LRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDY 274
>TAIR|locus:2046857 [details] [associations]
symbol:AT2G23400 species:3702 "Arabidopsis thaliana"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0019408 "dolichol
biosynthetic process" evidence=IGI;RCA] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IGI]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 EMBL:CP002685 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 IPI:IPI00544170 RefSeq:NP_179921.2
UniGene:At.52878 ProteinModelPortal:F4IMI8 SMR:F4IMI8
EnsemblPlants:AT2G23400.1 GeneID:816872 KEGG:ath:AT2G23400
OMA:FACSHEN ArrayExpress:F4IMI8 Uniprot:F4IMI8
Length = 253
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 76/229 (33%), Positives = 123/229 (53%)
Query: 20 LKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFS 79
L++ +P+H++FI+DGNRR+AKR T +GH G ++ E + C +LG+ V+ +AFS
Sbjct: 31 LQRELMPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFS 90
Query: 80 IENFKRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAM 139
EN+ R + EV LM L K I+ K +R+ +IGN +P L+ KE +
Sbjct: 91 TENWGRDKFEVKCLMSLFNHYLKSNIQY---FQRKEVRVSVIGNKTKIPESLL---KE-I 143
Query: 140 HITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPE 199
H ++ T+ S +S + ++ + LI R + + +L C P
Sbjct: 144 HEIEEATKA---TRISISSWHLVKKSEKGLI---REEDVDEALIERELLTNC---SDFPS 194
Query: 200 PDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
PDL+IRTSGE R+S+F L Q + L++ LWP+F L+ A+ ++Q
Sbjct: 195 PDLMIRTSGEQRISNFFLWQLAYTELFYSPVLWPDFDKDKLLEALASYQ 243
>GENEDB_PFALCIPARUM|MAL8P1.22 [details] [associations]
symbol:MAL8P1.22 "dehydrodolichyl diphosphate
synthetase, putative" species:5833 "Plasmodium falciparum"
[GO:0004659 "prenyltransferase activity" evidence=ISS] [GO:0019408
"dolichol biosynthetic process" evidence=ISS] InterPro:IPR001441
Pfam:PF01255 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 GO:GO:0019408 GO:GO:0004659 GO:GO:0008834
EMBL:AL844507 RefSeq:XP_001349261.2 ProteinModelPortal:Q8IB97
EnsemblProtists:MAL8P1.22:mRNA GeneID:2655228 KEGG:pfa:MAL8P1.22
EuPathDB:PlasmoDB:PF3D7_0826400 HOGENOM:HOG000282595
ProtClustDB:PTZ00349 Uniprot:Q8IB97
Length = 317
Score = 208 (78.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 51/143 (35%), Positives = 85/143 (59%)
Query: 27 KHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKRT 86
KHI+ IMDGNRR+AK T GH G L + ++ C+ L ++ ++V++FS+ N+ R+
Sbjct: 21 KHISIIMDGNRRFAKEKGLHTAIGHFMGSKTLIQIIEICIKLNIKILSVFSFSLLNYNRS 80
Query: 87 EEEVNGLMDLARAKFKRLIEEK---DKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
EE++ L L LI E + + I+I+IIGN+ + +D S+++ ++ +
Sbjct: 81 PEEIHFLFYL---NLLVLINEDFFFKFIKDNKIKIKIIGNLSYV-ND---SYRKIIYDIE 133
Query: 144 DNTEGF----LNVAFSYTSRDEM 162
+ T+ F LN+ FSYTSR+EM
Sbjct: 134 EKTKNFNNIRLNIFFSYTSRNEM 156
Score = 127 (49.8 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 177 KITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQ-SKSSFLYFCHKLWPEF 235
K E + + + L T P P+++IRTSGE RLSDFML Q S+ + +YF ++ WP F
Sbjct: 228 KYNEEQLEIVNYHNKLLTSDLPPPNILIRTSGEQRLSDFMLYQISEFTEIYFINEYWPVF 287
Query: 236 TAWNLINAVFAFQYDFYTNEMW 257
I + Y + W
Sbjct: 288 NFLQFIYIIL--HYTLFQTTKW 307
>UNIPROTKB|Q8IB97 [details] [associations]
symbol:MAL8P1.22 "Dehydrodolichyl diphosphate synthetase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0019408 "dolichol
biosynthetic process" evidence=ISS] InterPro:IPR001441 Pfam:PF01255
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 GO:GO:0019408 GO:GO:0004659 GO:GO:0008834
EMBL:AL844507 RefSeq:XP_001349261.2 ProteinModelPortal:Q8IB97
EnsemblProtists:MAL8P1.22:mRNA GeneID:2655228 KEGG:pfa:MAL8P1.22
EuPathDB:PlasmoDB:PF3D7_0826400 HOGENOM:HOG000282595
ProtClustDB:PTZ00349 Uniprot:Q8IB97
Length = 317
Score = 208 (78.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 51/143 (35%), Positives = 85/143 (59%)
Query: 27 KHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKRT 86
KHI+ IMDGNRR+AK T GH G L + ++ C+ L ++ ++V++FS+ N+ R+
Sbjct: 21 KHISIIMDGNRRFAKEKGLHTAIGHFMGSKTLIQIIEICIKLNIKILSVFSFSLLNYNRS 80
Query: 87 EEEVNGLMDLARAKFKRLIEEK---DKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
EE++ L L LI E + + I+I+IIGN+ + +D S+++ ++ +
Sbjct: 81 PEEIHFLFYL---NLLVLINEDFFFKFIKDNKIKIKIIGNLSYV-ND---SYRKIIYDIE 133
Query: 144 DNTEGF----LNVAFSYTSRDEM 162
+ T+ F LN+ FSYTSR+EM
Sbjct: 134 EKTKNFNNIRLNIFFSYTSRNEM 156
Score = 127 (49.8 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 177 KITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQ-SKSSFLYFCHKLWPEF 235
K E + + + L T P P+++IRTSGE RLSDFML Q S+ + +YF ++ WP F
Sbjct: 228 KYNEEQLEIVNYHNKLLTSDLPPPNILIRTSGEQRLSDFMLYQISEFTEIYFINEYWPVF 287
Query: 236 TAWNLINAVFAFQYDFYTNEMW 257
I + Y + W
Sbjct: 288 NFLQFIYIIL--HYTLFQTTKW 307
>UNIPROTKB|P60472 [details] [associations]
symbol:ispU "subunit of undecaprenyl diphosphate synthase"
species:83333 "Escherichia coli K-12" [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=IEA;IMP]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0016094 "polyprenol biosynthetic
process" evidence=IDA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA;IDA] [GO:0043164 "Gram-negative-bacterium-type cell
wall biogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0005737 GO:GO:0051301
GO:GO:0008360 GO:GO:0000287 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0007049
EMBL:U70214 GO:GO:0009252 GO:GO:0016094 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF KO:K00806
GO:GO:0008834 GO:GO:0043164 PIR:F64741 RefSeq:NP_414716.1
RefSeq:YP_488476.1 PDB:1JP3 PDB:1UEH PDB:1V7U PDB:1X06 PDB:1X07
PDB:1X08 PDB:1X09 PDB:2E98 PDB:2E99 PDB:2E9A PDB:2E9C PDB:2E9D
PDB:3QAS PDB:3SGV PDB:3SGX PDB:3SH0 PDB:3TH8 PDB:4H2J PDB:4H2M
PDB:4H2O PDB:4H38 PDB:4H3A PDB:4H3C PDBsum:1JP3 PDBsum:1UEH
PDBsum:1V7U PDBsum:1X06 PDBsum:1X07 PDBsum:1X08 PDBsum:1X09
PDBsum:2E98 PDBsum:2E99 PDBsum:2E9A PDBsum:2E9C PDBsum:2E9D
PDBsum:3QAS PDBsum:3SGV PDBsum:3SGX PDBsum:3SH0 PDBsum:3TH8
PDBsum:4H2J PDBsum:4H2M PDBsum:4H2O PDBsum:4H38 PDBsum:4H3A
PDBsum:4H3C DisProt:DP00516 ProteinModelPortal:P60472 SMR:P60472
DIP:DIP-48251N IntAct:P60472 PRIDE:P60472
EnsemblBacteria:EBESCT00000004356 EnsemblBacteria:EBESCT00000014776
GeneID:12931773 GeneID:944874 KEGG:ecj:Y75_p0170 KEGG:eco:b0174
PATRIC:32115457 EchoBASE:EB3113 EcoGene:EG13329
ProtClustDB:PRK10240 BioCyc:EcoCyc:UPPSYN-MONOMER
BioCyc:ECOL316407:JW0169-MONOMER BioCyc:MetaCyc:UPPSYN-MONOMER
EvolutionaryTrace:P60472 Genevestigator:P60472 Uniprot:P60472
Length = 253
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 73/226 (32%), Positives = 122/226 (53%)
Query: 24 HVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENF 83
H +H+A IMDGN R+AK+ GH G + + + + G+ +T+YAFS EN+
Sbjct: 16 HGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENW 75
Query: 84 KRTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK 143
R +EV+ LM+L L E L+ +R+RIIG+ S L +++ +T
Sbjct: 76 NRPAQEVSALMELF---VWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTA 132
Query: 144 DNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDK--CLYTGTSPEPD 201
NT LN+A +Y R ++V+ R L + ++ + + + ++ ++ C++ +P D
Sbjct: 133 GNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHE-LAPV-D 190
Query: 202 LIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAF 247
L+IRT GE R+S+F+L Q + LYF LWP+F + A+ AF
Sbjct: 191 LVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAF 236
>UNIPROTKB|H0Y4T1 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AL513365 HGNC:HGNC:20603
Ensembl:ENST00000416052 Uniprot:H0Y4T1
Length = 162
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 59/123 (47%), Positives = 76/123 (61%)
Query: 126 LLPSDLIASFKEAMHITKDNTEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTM 185
LLP DL +A+ TK+ + FLNV F+YTSR E+ R + G+ + D++
Sbjct: 3 LLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISE 62
Query: 186 DLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVF 245
L DKCLYT SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL A+
Sbjct: 63 SLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAIL 122
Query: 246 AFQ 248
FQ
Sbjct: 123 QFQ 125
>UNIPROTKB|E9PSH7 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005 EMBL:AL513365
HGNC:HGNC:20603 IPI:IPI00978850 ProteinModelPortal:E9PSH7
SMR:E9PSH7 Ensembl:ENST00000525546 ArrayExpress:E9PSH7 Bgee:E9PSH7
Uniprot:E9PSH7
Length = 85
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGVREVTVYAFSIENFKR 85
TL+WCL+LG+ EVTVYAFSIENFKR
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKR 85
>TIGR_CMR|CJE_0911 [details] [associations]
symbol:CJE_0911 "undecaprenyl diphosphate synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0046872 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0020 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 KO:K00806
RefSeq:YP_178913.1 ProteinModelPortal:Q5HUX2 STRING:Q5HUX2
GeneID:3231424 KEGG:cjr:CJE0911 PATRIC:20043589 OMA:FLWRIAY
ProtClustDB:CLSK878944 BioCyc:CJEJ195099:GJC0-931-MONOMER
Uniprot:Q5HUX2
Length = 222
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 60/211 (28%), Positives = 116/211 (54%)
Query: 27 KHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFKRT 86
KH+A +MDGNRR+A+ G+S+G + + ++ C++ + ++++AFS EN+KR
Sbjct: 5 KHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRP 64
Query: 87 EEEVNGLMDLARAKFKRLIEEK-DKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITKDN 145
++E++ + +L R ++E +K + +R+R IG++ L + TK
Sbjct: 65 KDEIDFIFEL----LDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHC 120
Query: 146 TEGFLNVAFSYTSRDEMVETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIR 205
+N+A SY +RDE++ ++ +I+ + ++ E++T +L D L + DL++R
Sbjct: 121 DALCVNLAISYGARDEIIRAAKRVIE--KKLELNEENLTQNL-DLPL------DVDLMLR 171
Query: 206 TSGETRLSDFMLVQSKSSFLYFCHKLWPEFT 236
RLS+F+L Q + +YF L+P T
Sbjct: 172 VGNAKRLSNFLLWQCSYAEIYFSETLFPSLT 202
>UNIPROTKB|E9PL99 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005 EMBL:AL513365
HGNC:HGNC:20603 IPI:IPI00983014 ProteinModelPortal:E9PL99
SMR:E9PL99 Ensembl:ENST00000525326 ArrayExpress:E9PL99 Bgee:E9PL99
Uniprot:E9PL99
Length = 71
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 39/70 (55%), Positives = 54/70 (77%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLQWCLDLGV 70
TL+WCL+LG+
Sbjct: 61 TLRWCLNLGI 70
>UNIPROTKB|I3LU88 [details] [associations]
symbol:I3LU88 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016765 "transferase activity, transferring alkyl or
aryl (other than methyl) groups" evidence=IEA] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
GeneTree:ENSGT00390000007879 EMBL:FP236394
Ensembl:ENSSSCT00000029348 Uniprot:I3LU88
Length = 117
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 40/67 (59%), Positives = 47/67 (70%)
Query: 182 DVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLI 241
DV+ L DKCLYT SP PD++IRTSGE RLSDF+L Q+ S L F LWPE+T WNL
Sbjct: 14 DVSESLLDKCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLC 73
Query: 242 NAVFAFQ 248
A+ FQ
Sbjct: 74 EAILQFQ 80
>UNIPROTKB|Q5T0A0 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005 EMBL:AL513365
UniGene:Hs.369385 HGNC:HGNC:20603 IPI:IPI00514634 SMR:Q5T0A0
Ensembl:ENST00000434391 HOGENOM:HOG000120111 HOVERGEN:HBG057539
Uniprot:Q5T0A0
Length = 73
Score = 178 (67.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TL 62
L
Sbjct: 61 LL 62
>UNIPROTKB|E9PKJ5 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 Pfam:PF01255 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005 EMBL:AL513365
HGNC:HGNC:20603 IPI:IPI00979470 ProteinModelPortal:E9PKJ5
SMR:E9PKJ5 Ensembl:ENST00000530781 ArrayExpress:E9PKJ5 Bgee:E9PKJ5
Uniprot:E9PKJ5
Length = 60
Score = 175 (66.7 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 1 MSWVVDSTLNWFQYAIIKLLKKGHVPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAE 60
MSW+ + L+ ++ ++K G +PKHIAFIMDGNRRYAK+ + EGHS+GF+KLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
>TIGR_CMR|CHY_0237 [details] [associations]
symbol:CHY_0237 "putative undecaprenyl diphosphate
synthase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
InterPro:IPR001441 Pfam:PF01255 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0020 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005 KO:K00806
RefSeq:YP_359109.1 ProteinModelPortal:Q3AFH5 STRING:Q3AFH5
GeneID:3726834 KEGG:chy:CHY_0237 PATRIC:21273655
HOGENOM:HOG000006057 OMA:IDLIIRW ProtClustDB:CLSK882796
BioCyc:CHYD246194:GJCN-238-MONOMER Uniprot:Q3AFH5
Length = 213
Score = 139 (54.0 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 25 VPKHIAFIMDGNRRYAKRSNAKTIEGHSKGFDKLAETLQWCLDLGVREVTVYAFSIENFK 84
+PKHI I DGNRR+A+ +G+ G D + CL LG+ E+T Y F+++N K
Sbjct: 9 LPKHIGIIPDGNRRWAEAQGMTKEKGYFFGIDPGIRLYELCLALGIPELTFYGFTVDNTK 68
Query: 85 RTEEEVNGLMDLARAKFKRLIEEKDKLNEKGIRIRIIGN 123
R N D R K +E +L+++ + ++GN
Sbjct: 69 RP----NYQRDAFR---KACVEAVKRLSQRDSALLVVGN 100
Score = 82 (33.9 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 201 DLIIRTSGETRLSDFMLVQSKSSFLYFCHKLWPEFTAWNLINAVFAFQ 248
DLIIR G RLS F+ +QS + Y WP+F +L A+ +Q
Sbjct: 158 DLIIRWGGRRRLSGFLPIQSIYADFYVIDDYWPDFKDEHLYQALSWYQ 205
>UNIPROTKB|Q5T0A6 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 HOGENOM:HOG000006053 EMBL:AL513365
UniGene:Hs.369385 HGNC:HGNC:20603 HOVERGEN:HBG051350 SMR:Q5T0A6
Ensembl:ENST00000431933 Uniprot:Q5T0A6
Length = 169
Score = 161 (61.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 163 VETSRILIDGLRTNKITNEDVTMDLFDKCLYTGTSPEPDLIIRTSGETRLSDFMLVQSKS 222
++ ++ ++ K N D++ L DKCLYT SP PD++IRTSGE RLSDF+L Q K+
Sbjct: 34 LDLQELIAQAVQATKNYNNDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQQKA 93
Query: 223 SFLY 226
+Y
Sbjct: 94 RDMY 97
Score = 128 (50.1 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 96 LARAKFKRLIEEKDKLNEKGIRIRIIGNIELLPSDLIASFKEAMHITK----DNTEGFLN 151
LAR KF RL+EEK+KL + G+ IR++G++ LLP DL +A+ TK D +E L+
Sbjct: 1 LARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNNDISESLLD 60
Query: 152 VAFSYTSR----DEMVETS 166
YT+R D ++ TS
Sbjct: 61 KCL-YTNRSPHPDILIRTS 78
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 295 0.00092 115 3 11 22 0.37 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 623 (66 KB)
Total size of DFA: 223 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.83u 0.10s 24.93t Elapsed: 00:00:11
Total cpu time: 24.84u 0.10s 24.94t Elapsed: 00:00:12
Start: Thu Aug 15 13:36:12 2013 End: Thu Aug 15 13:36:24 2013