BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16155
(306 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
pdb|1CJK|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1CS4|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1TL7|B Chain B, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
pdb|1U0H|B Chain B, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|B Chain B, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|B Chain B, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3C14|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
pdb|3G82|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|B Chain B, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 212
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 102/186 (54%), Gaps = 27/186 (14%)
Query: 56 RELYYEQYDSVSVMFATLVE-----SHDTAPASTLVSLEILNQIICDFDKILFVPKASRV 110
ELY++ YD V VMFA++ + + L L +LN+II DFD +L PK S V
Sbjct: 6 EELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGV 65
Query: 111 EKIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLE--PSVRSASGEDNTHPLV-MMTCF 167
EKIK G T Y+AA GL PS A + + + M F
Sbjct: 66 EKIKTIGST-------------------YMAATGLSAIPSQEHAQEPERQYMHIGTMVEF 106
Query: 168 AANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGL 227
A ++ L N + + FKLR+GI HG V AGV+G+QKP YDIWG+ VN+ASRMDSTG+
Sbjct: 107 AYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGV 166
Query: 228 PNEIQV 233
++IQV
Sbjct: 167 LDKIQV 172
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+AGV+G+QKP YDIWG+ VN+ASRMDSTG+ ++I
Sbjct: 137 IAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKI 170
>pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
Length = 208
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 102/186 (54%), Gaps = 27/186 (14%)
Query: 56 RELYYEQYDSVSVMFATLVE-----SHDTAPASTLVSLEILNQIICDFDKILFVPKASRV 110
ELY++ YD V VMFA++ + + L L +LN+II DFD +L PK S V
Sbjct: 2 EELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGV 61
Query: 111 EKIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLE--PSVRSASGEDNTHPLV-MMTCF 167
EKIK G T Y+AA GL PS A + + + M F
Sbjct: 62 EKIKTIGST-------------------YMAATGLSAIPSQEHAQEPERQYMHIGTMVEF 102
Query: 168 AANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGL 227
A ++ L N + + FKLR+GI HG V AGV+G+QKP YDIWG+ VN+ASRMDSTG+
Sbjct: 103 AYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGV 162
Query: 228 PNEIQV 233
++IQV
Sbjct: 163 LDKIQV 168
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+AGV+G+QKP YDIWG+ VN+ASRMDSTG+ ++I
Sbjct: 133 IAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKI 166
>pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX
pdb|1AB8|B Chain B, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX
Length = 220
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 102/186 (54%), Gaps = 27/186 (14%)
Query: 56 RELYYEQYDSVSVMFATLVE-----SHDTAPASTLVSLEILNQIICDFDKILFVPKASRV 110
ELY++ YD V VMFA++ + + L L +LN+II DFD +L PK S V
Sbjct: 5 EELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGV 64
Query: 111 EKIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLE--PSVRSASGEDNTHPLV-MMTCF 167
EKIK G T Y+AA GL PS A + + + M F
Sbjct: 65 EKIKTIGST-------------------YMAATGLSAIPSQEHAQEPERQYMHIGTMVEF 105
Query: 168 AANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGL 227
A ++ L N + + FKLR+GI HG V AGV+G+QKP YDIWG+ VN+ASRMDSTG+
Sbjct: 106 AYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGV 165
Query: 228 PNEIQV 233
++IQV
Sbjct: 166 LDKIQV 171
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+AGV+G+QKP YDIWG+ VN+ASRMDSTG+ ++I
Sbjct: 136 IAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKI 169
>pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial
Adenylyl Cyclase Rv1625c
Length = 204
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 37/182 (20%)
Query: 56 RELYYEQYDSVSVMFATLV----ESHDTAPASTLVSLEILNQIICDFDKILFVPKASRVE 111
R + ++YD SV+FA +V + TAPA + L+++ FD+++ +E
Sbjct: 1 RNIIADKYDEASVLFADIVGFTERASSTAPADLV---RFLDRLYSAFDELV---DQHGLE 54
Query: 112 KIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANM 171
KI+V+G +Y+ G R D+T L FA +M
Sbjct: 55 KIEVSGDSYMVVSGVPRPRP------------------------DHTQAL---ADFALDM 87
Query: 172 LRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 231
V + + LR+G+A G V AGVVGS++ Y +WGD VN+ASRM+ST +I
Sbjct: 88 TNVAAQLKDPRGNPVPLRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQI 147
Query: 232 QV 233
QV
Sbjct: 148 QV 149
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDST 300
+AGVVGS++ Y +WGD VN+ASRM+ST
Sbjct: 114 VAGVVGSRRFRYCVWGDAVNVASRMEST 141
>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
Length = 220
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 55 YRELYYEQYDSVSVMFATLVESHDTAPASTLVSLEI---LNQIICDFDKILFVPKASRVE 111
+ ++Y +++D+VS++FA + T+ AS + E+ LN++ FDK
Sbjct: 24 FHKIYIQKHDNVSILFADI--EGFTSLASQCTAQELVMTLNELFARFDK----------- 70
Query: 112 KIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANM 171
LAA + +IK+ G Y GL P R+ D+ H V M
Sbjct: 71 ---------LAA--ENHCLRIKILGDCYYCVSGL-PEARA----DHAHCCVEMGMDMIEA 114
Query: 172 LRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 231
+ ++R+ N +R+GI G V GV+G +K +D+W + V LA+ M++ G I
Sbjct: 115 ISLVREMTGVN---VNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 171
Query: 232 QV 233
+
Sbjct: 172 HI 173
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 274 AGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
GV+G +K +D+W + V LA+ M++ G I
Sbjct: 139 CGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 171
>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1U0H|A Chain A, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|A Chain A, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3C14|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
pdb|3G82|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|A Chain A, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 225
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 55 YRELYYEQYDSVSVMFATLVESHDTAPASTLVSLEI---LNQIICDFDKILFVPKASRVE 111
+ ++Y +++D+VS++FA + T+ AS + E+ LN++ FDK
Sbjct: 24 FHKIYIQKHDNVSILFADI--EGFTSLASQCTAQELVMTLNELFARFDK----------- 70
Query: 112 KIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANM 171
LAA + +IK+ G Y GL P R+ D+ H V M
Sbjct: 71 ---------LAA--ENHCLRIKILGDCYYCVSGL-PEARA----DHAHCCVEMGMDMIEA 114
Query: 172 LRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 231
+ ++R+ N +R+GI G V GV+G +K +D+W + V LA+ M++ G I
Sbjct: 115 ISLVREMTGVN---VNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 171
Query: 232 QV 233
+
Sbjct: 172 HI 173
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 274 AGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
GV+G +K +D+W + V LA+ M++ G I
Sbjct: 139 CGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 171
>pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1CUL|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
pdb|1TL7|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
Length = 217
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 55 YRELYYEQYDSVSVMFATLVESHDTAPASTLVSLEI---LNQIICDFDKILFVPKASRVE 111
+ ++Y +++D+VS++FA + T+ AS + E+ LN++ FDK
Sbjct: 16 FHKIYIQKHDNVSILFADI--EGFTSLASQCTAQELVMTLNELFARFDK----------- 62
Query: 112 KIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANM 171
LAA + +IK+ G Y GL P R+ D+ H V M
Sbjct: 63 ---------LAA--ENHCLRIKILGDCYYCVSGL-PEARA----DHAHCCVEMGMDMIEA 106
Query: 172 LRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 231
+ ++R+ N +R+GI G V GV+G +K +D+W + V LA+ M++ G I
Sbjct: 107 ISLVREMTGVN---VNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 163
Query: 232 QV 233
+
Sbjct: 164 HI 165
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 274 AGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
GV+G +K +D+W + V LA+ M++ G I
Sbjct: 131 CGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 163
>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 225
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 124 CGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANN 183
CG V K++ G Y A GL E +TH V + A M+ + + + +
Sbjct: 52 CGELDVYKVETIGDAYCVAGGLHK-------ESDTH-AVQIALMALKMMELSDEVMSPHG 103
Query: 184 HTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQV 233
K+RIG+ G+V AGVVG + P Y ++G+ V LA++ +S +P +I V
Sbjct: 104 EPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINV 153
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
AGVVG + P Y ++G+ V LA++ +S +P +I
Sbjct: 118 FAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKI 151
>pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A
Eukaryotic Guanylate Cyclase
Length = 190
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 131 KIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRI 190
K++ G Y+ C + + H V++ FA M + ++ ++R+
Sbjct: 55 KVETIGDAYMVVCNVTVPC-------DDHADVLLE-FALRMHEEASRVASSLGEPVRIRV 106
Query: 191 GIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQV 233
G+ G V AGVVG + P + ++GD VN ASRM+S G +I +
Sbjct: 107 GMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHI 149
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+AGVVG + P + ++GD VN ASRM+S G +I
Sbjct: 114 VAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQI 147
>pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A
Eukaryotic Guanylate Cyclase
Length = 190
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 131 KIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRI 190
K++ G Y+ C + + H V++ FA M + ++ ++R+
Sbjct: 55 KVETIGDAYMVVCNVTVPC-------DDHADVLLE-FALRMHEEASRVASSLGEPVRIRV 106
Query: 191 GIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQV 233
G+ G V AGVVG + P + ++GD VN ASRM+S G +I +
Sbjct: 107 GMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHI 149
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+AGVVG + P + ++GD VN ASRM+S G +I
Sbjct: 114 VAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQI 147
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3.
pdb|2WZ1|B Chain B, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3
Length = 219
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 33/178 (18%)
Query: 61 EQYDSVSVMFATLVE-----SHDTAPASTLVSLEILNQIICDFDKILFVPKASRVEKIKV 115
++YD+V+++F+ +V S + + + +LN + FD + K V K++
Sbjct: 8 KRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVET 67
Query: 116 AGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVL 175
G Y+ G EP + A + A +M+ +
Sbjct: 68 VGDKYMTVSGLP------------------EPCIHHARS---------ICHLALDMMEIA 100
Query: 176 RKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQV 233
+ + + ++ IGI G V GV+G + P Y ++G+ VNL SR ++TG +I V
Sbjct: 101 GQVQV-DGESVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINV 157
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+ GV+G + P Y ++G+ VNL SR ++TG +I
Sbjct: 122 VTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKI 155
>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 220
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 33/178 (18%)
Query: 61 EQYDSVSVMFATLVE-----SHDTAPASTLVSLEILNQIICDFDKILFVPKASRVEKIKV 115
++YD+V+++F+ +V S + + + +LN + FD + K V K++
Sbjct: 9 KRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVET 68
Query: 116 AGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVL 175
Y+ G EP + A + A +M+ +
Sbjct: 69 VCDKYMTVSGLP------------------EPCIHHARS---------ICHLALDMMEIA 101
Query: 176 RKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQV 233
+ + + ++ IGI G V GV+G + P Y ++G+ VNL SR ++TG +I V
Sbjct: 102 GQVQV-DGESVQITIGIHTGEVVTGVIGQRMPRYSLFGNTVNLTSRTETTGEKGKINV 158
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 273 LAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306
+ GV+G + P Y ++G+ VNL SR ++TG +I
Sbjct: 123 VTGVIGQRMPRYSLFGNTVNLTSRTETTGEKGKI 156
>pdb|3R5G|A Chain A, Crystal Structure Of The Adenylyl Cyclase Cyab From P.
Aeruginosa
pdb|3R5G|B Chain B, Crystal Structure Of The Adenylyl Cyclase Cyab From P.
Aeruginosa
Length = 198
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 146 EPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHT--FKLRIGIAHGAVTAGVVG 203
+PS + A +D + M +M +VLR+ A T ++R+GI G T G G
Sbjct: 68 DPSTQGAK-KDAVAAVSMGIAMRKHM-KVLRQQWRAQGITKPLEIRMGINTGYCTVGNFG 125
Query: 204 SQKPL-YDIWGDVVNLASRMDSTGLPNEI 231
+ + Y I G VNLASR++S EI
Sbjct: 126 ADTRMDYTIIGREVNLASRLESASEAGEI 154
>pdb|1WC0|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp
pdb|1WC0|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp
pdb|1WC3|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Strontium
pdb|1WC3|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Strontium
pdb|1WC4|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Europium
pdb|1WC4|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Europium
pdb|1WC5|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|D Chain D, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|2BW7|A Chain A, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|B Chain B, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|C Chain C, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|D Chain D, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
Length = 219
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 187 KLRIGIAHGAVTAGVVGSQ-KPLYDIWGDVVNLASRMDSTGLPNEIQV 233
+ R GI G G+ GSQ + + G VN+A+R+ PN I V
Sbjct: 132 RFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIMV 179
>pdb|1WC1|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas
pdb|1WC1|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas
pdb|1WC1|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas
pdb|1WC6|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas In Presence Of Bicarbonate
pdb|1WC6|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas In Presence Of Bicarbonate
pdb|1WC6|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas In Presence Of Bicarbonate
Length = 226
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 187 KLRIGIAHGAVTAGVVGSQ-KPLYDIWGDVVNLASRMDSTGLPNEIQV 233
+ R GI G G+ GSQ + + G VN+A+R+ PN I V
Sbjct: 139 RFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIMV 186
>pdb|2W01|A Chain A, Crystal Structure Of The Guanylyl Cyclase Cya2
pdb|2W01|B Chain B, Crystal Structure Of The Guanylyl Cyclase Cya2
pdb|2W01|C Chain C, Crystal Structure Of The Guanylyl Cyclase Cya2
pdb|2W01|D Chain D, Crystal Structure Of The Guanylyl Cyclase Cya2
pdb|2W01|E Chain E, Crystal Structure Of The Guanylyl Cyclase Cya2
pdb|2W01|F Chain F, Crystal Structure Of The Guanylyl Cyclase Cya2
Length = 208
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 186 FKLRIGIAHGAVTAGVVGSQKPL-YDIWGDVVNLASRMDS 224
++ IGI G V G +GS+K Y + G VNL R++S
Sbjct: 110 LEMGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIES 149
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,375,377
Number of Sequences: 62578
Number of extensions: 298582
Number of successful extensions: 453
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 411
Number of HSP's gapped (non-prelim): 31
length of query: 306
length of database: 14,973,337
effective HSP length: 98
effective length of query: 208
effective length of database: 8,840,693
effective search space: 1838864144
effective search space used: 1838864144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)