Query psy16155
Match_columns 306
No_of_seqs 262 out of 2037
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 22:13:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16155.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16155hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ab8_A Adenylyl cyclase; lyase 100.0 1.8E-32 6.1E-37 243.2 15.0 172 55-242 4-180 (220)
2 1azs_A VC1; complex (lyase/hyd 100.0 2.7E-32 9.3E-37 242.2 14.0 157 55-241 24-181 (220)
3 3uvj_A Guanylate cyclase solub 100.0 1.1E-32 3.7E-37 245.4 8.2 156 56-241 5-161 (225)
4 3et6_A Soluble guanylyl cyclas 100.0 2.4E-31 8.2E-36 230.1 12.6 154 59-241 3-157 (190)
5 2wz1_A Guanylate cyclase solub 100.0 9.6E-32 3.3E-36 238.5 9.8 156 57-241 4-165 (219)
6 1yk9_A Adenylate cyclase; beta 100.0 6.5E-32 2.2E-36 236.9 4.3 154 58-241 3-157 (204)
7 2w01_A Adenylate cyclase; guan 100.0 2.6E-30 8.8E-35 227.2 12.7 153 59-241 8-166 (208)
8 1wc3_A Adenylate cyclase; solu 100.0 3.5E-30 1.2E-34 228.3 12.0 156 59-242 21-188 (219)
9 3r5g_A CYAB; adenylyl cyclase, 100.0 6.9E-30 2.4E-34 222.2 11.4 154 60-241 4-164 (198)
10 1y10_A Hypothetical protein RV 100.0 9E-29 3.1E-33 237.4 13.5 166 28-242 163-344 (407)
11 1fx2_A Receptor-type adenylate 99.9 4.2E-28 1.4E-32 216.6 10.6 147 57-241 4-186 (235)
12 1ybt_A Hydrolase, alpha/beta h 99.9 5.4E-28 1.9E-32 208.7 6.6 141 55-241 7-148 (184)
13 3mr7_A Adenylate/guanylate cyc 99.9 4.5E-26 1.6E-30 197.0 13.2 137 61-241 3-142 (189)
14 3uvj_A Guanylate cyclase solub 99.5 3.4E-15 1.2E-19 132.2 6.3 118 161-306 34-151 (225)
15 3et6_A Soluble guanylyl cyclas 99.5 2.2E-14 7.5E-19 123.4 8.4 119 161-306 29-147 (190)
16 1azs_A VC1; complex (lyase/hyd 99.5 6.8E-15 2.3E-19 130.1 4.6 118 161-306 54-171 (220)
17 1ab8_A Adenylyl cyclase; lyase 99.5 3.3E-14 1.1E-18 125.5 6.9 119 162-306 39-169 (220)
18 2wz1_A Guanylate cyclase solub 99.5 3.1E-14 1.1E-18 125.7 5.5 120 161-306 36-155 (219)
19 2w01_A Adenylate cyclase; guan 99.4 8E-14 2.7E-18 121.8 5.3 121 162-306 35-156 (208)
20 1yk9_A Adenylate cyclase; beta 99.4 1.5E-13 5.2E-18 119.9 3.2 114 165-306 34-147 (204)
21 3r5g_A CYAB; adenylyl cyclase, 99.3 3.7E-12 1.3E-16 110.0 9.6 123 161-306 29-154 (198)
22 1wc3_A Adenylate cyclase; solu 99.3 2E-12 6.8E-17 113.9 7.8 124 162-306 48-177 (219)
23 1fx2_A Receptor-type adenylate 99.3 6.3E-12 2.2E-16 111.5 7.0 114 164-306 34-176 (235)
24 1ybt_A Hydrolase, alpha/beta h 99.1 6.3E-11 2.2E-15 101.5 4.9 102 161-306 37-138 (184)
25 1y10_A Hypothetical protein RV 99.1 5.7E-11 2E-15 113.8 5.1 99 161-306 235-333 (407)
26 3mr7_A Adenylate/guanylate cyc 98.8 1.8E-09 6.3E-14 92.4 4.2 101 166-306 31-132 (189)
27 3hls_A Guanylate cyclase solub 96.1 0.0076 2.6E-07 42.5 4.7 40 12-51 23-66 (66)
28 2qv6_A MJ0145, GTP cyclohydrol 89.8 1.8 6.3E-05 38.5 9.7 61 62-125 128-190 (268)
29 3i5c_A Fusion of general contr 87.7 5.6 0.00019 32.5 10.9 59 64-125 60-119 (206)
30 3ezu_A Ggdef domain protein; m 81.4 23 0.0008 32.0 13.0 57 64-124 212-269 (342)
31 3tvk_A DGC, diguanylate cyclas 70.2 9.1 0.00031 31.5 6.3 57 65-125 33-90 (179)
32 3ign_A Diguanylate cyclase; gg 65.0 22 0.00074 28.0 7.5 58 64-125 38-96 (177)
33 3pjx_A Cyclic dimeric GMP bind 64.5 58 0.002 30.0 11.4 63 63-125 46-109 (430)
34 3hva_A Protein FIMX; ggdef dig 59.9 59 0.002 25.3 10.6 57 64-124 43-100 (177)
35 3qyy_A Response regulator; C-D 56.5 63 0.0022 24.9 8.8 56 65-124 42-98 (167)
36 3mtk_A Diguanylate cyclase/pho 54.7 24 0.0008 28.0 6.0 57 64-124 35-92 (178)
37 3bre_A Probable two-component 50.8 1.2E+02 0.0042 26.6 10.7 59 64-125 201-260 (358)
38 3icl_A EAL/ggdef domain protei 41.9 29 0.00097 27.0 4.4 58 64-125 29-87 (171)
39 3hvw_A Diguanylate-cyclase (DG 33.6 35 0.0012 27.0 3.8 56 65-125 27-86 (176)
40 1w25_A Stalked-cell differenti 24.3 2.5E+02 0.0087 25.5 8.5 58 64-125 318-376 (459)
No 1
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=100.00 E-value=1.8e-32 Score=243.23 Aligned_cols=172 Identities=44% Similarity=0.633 Sum_probs=144.4
Q ss_pred CcccccceeCcEEEEEEecCCcCcCCCC-C----hHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCcc
Q psy16155 55 YRELYYEQYDSVSVMFATLVESHDTAPA-S----TLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRV 129 (306)
Q Consensus 55 ~~~~~~~~~~~vtvlF~DI~gft~l~~~-~----~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~ 129 (306)
.+.+.+++++++||||+||+|||.+++. + |++++.+||++|+.+++++.++++.+++++|++||+||++||+|..
T Consensus 4 ~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p~~ 83 (220)
T 1ab8_A 4 NEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAI 83 (220)
T ss_dssp ---CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCCCS
T ss_pred CCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCCcc
Confidence 3557788999999999999999999987 3 7899999999999999999544322899999999999999999863
Q ss_pred chhhhcccchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCccc
Q psy16155 130 EKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLY 209 (306)
Q Consensus 130 ~kik~~G~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y 209 (306)
...+ .....+...+|+.+++++|++|++.+..++.....++++|||||+|+|++|++|..+++|
T Consensus 84 ~~~~----------------~~~~~~~~~~~a~~a~~~Al~~~~~l~~~~~~~~~~l~~rIGIh~G~v~~G~iG~~r~~y 147 (220)
T 1ab8_A 84 PSQE----------------HAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQY 147 (220)
T ss_dssp CCC------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCEEEEEEEEEEEEEECSSSCEE
T ss_pred cccc----------------ccccccccHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEEEEeeeEEEEeecCCceeE
Confidence 2000 000111245899999999999999999998776679999999999999999999999999
Q ss_pred ccccchHHHHHHHHhcCCCCeEEEecccccccC
Q psy16155 210 DIWGDVVNLASRMDSTGLPNEIQVFGFYPPFGD 242 (306)
Q Consensus 210 ~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~~ 242 (306)
+++|++||+|+||++.+.+++|++|+++++...
T Consensus 148 ~v~Gd~VN~AaRle~~a~~g~I~vS~~~~~~l~ 180 (220)
T 1ab8_A 148 DIWGNTVNVASRMDSTGVLDKIQVTEETSLILQ 180 (220)
T ss_dssp EEESHHHHHHHHHHHTCCTTCEEECHHHHHHHH
T ss_pred EEECcHHHHHHHHHhcCCCCeEEECHHHHHHhh
Confidence 999999999999999999999999999988543
No 2
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.98 E-value=2.7e-32 Score=242.24 Aligned_cols=157 Identities=22% Similarity=0.414 Sum_probs=145.9
Q ss_pred CcccccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhh
Q psy16155 55 YRELYYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIK 133 (306)
Q Consensus 55 ~~~~~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik 133 (306)
...+..++++++||||+||+|||.+++. +|++++.+||++|+.+++++ .+| +++++|++||+||++||+|...
T Consensus 24 ~~~l~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~Ln~~~~~~~~~i--~~~-gG~v~k~iGD~~ma~fg~p~~~--- 97 (220)
T 1azs_A 24 FHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLA--AEN-HCLRIKILGDCYYCVSGLPEAR--- 97 (220)
T ss_dssp SCCCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHH--HHH-TEEEEEEETTEEEEEESCSSCC---
T ss_pred cccccccccccEEEEEEEccChHHHHhhCCHHHHHHHHHHHHHHHHHHH--HHc-CcEEEEEeCCeEEEEECCCCCC---
Confidence 4556778899999999999999999998 99999999999999999999 556 9999999999999999998753
Q ss_pred hcccchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCccccccc
Q psy16155 134 VAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWG 213 (306)
Q Consensus 134 ~~G~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G 213 (306)
.+++.+|+++|++|++.+..++.....++.+|||||+|+|++|++|.++++|+++|
T Consensus 98 ------------------------~~~a~~Av~~Al~m~~~l~~~~~~~~~~l~irIGI~tG~v~~G~vG~~~~~y~v~G 153 (220)
T 1azs_A 98 ------------------------ADHAHCCVEMGMDMIEAISLVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWS 153 (220)
T ss_dssp ------------------------STHHHHHHHHHHHHHHHHHHHHHHHCSCCEEEEEEEEEEEEEEECSSSSCCCEEES
T ss_pred ------------------------hHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEEEEeEEEEEEeCCCCcEEEEEc
Confidence 57899999999999999999988777799999999999999999999889999999
Q ss_pred chHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 214 DVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 214 ~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
++||+|+||++.+.+++|+||+++++..
T Consensus 154 d~VN~AaRLe~~a~~g~IlvS~~t~~~l 181 (220)
T 1azs_A 154 NDVTLANHMEAGGKAGRIHITKATLSYL 181 (220)
T ss_dssp HHHHHHHHHHHTCCTTSEEECSTTTTTT
T ss_pred hHHHHHHHHHhcCCCCeEEECHHHHHhh
Confidence 9999999999999999999999998854
No 3
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.97 E-value=1.1e-32 Score=245.43 Aligned_cols=156 Identities=25% Similarity=0.409 Sum_probs=143.6
Q ss_pred cccccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhh
Q psy16155 56 RELYYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKV 134 (306)
Q Consensus 56 ~~~~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~ 134 (306)
....+++++++||||+||+|||.+++. +|++++.+||++|+.+++++ ++| +++++|++||+||++||+|...
T Consensus 5 ~~~~~~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i--~~~-~g~v~k~~GD~~ma~fg~p~~~---- 77 (225)
T 3uvj_A 5 QVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQC--GEL-DVYKVETIGDAYCVAGGLHKES---- 77 (225)
T ss_dssp CEEEEEEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHH--HHH-TCEEECCSTTCEEEEESSSSCC----
T ss_pred CccCCcccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHH--Hhc-CeEEEEeeCcEEEEEECCCCCc----
Confidence 446678899999999999999999998 89999999999999999999 556 9999999999999999998653
Q ss_pred cccchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccc
Q psy16155 135 AGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGD 214 (306)
Q Consensus 135 ~G~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~ 214 (306)
.+|+.+++.+|++|++.+.+++.....++++|||||+|+|++|++|..+++|+++|+
T Consensus 78 -----------------------~~~a~~a~~~al~~~~~~~~~~~~~~~~l~~riGih~G~v~~G~iG~~~~~~~~~Gd 134 (225)
T 3uvj_A 78 -----------------------DTHAVQIALMALKMMELSDEVMSPHGEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGN 134 (225)
T ss_dssp -----------------------TTHHHHHHHHHHHHHHHHTTSBCTTSCBCCEEEEEEEEEEEEEEECC-CCEEEEESH
T ss_pred -----------------------hHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEEEEeccEEEEEecCCCceEEEECc
Confidence 579999999999999999988777777899999999999999999998889999999
Q ss_pred hHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 215 VVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 215 ~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
+||+|+||++.+.+++|+||+++++..
T Consensus 135 ~VN~AaRle~~a~~~~I~vS~~~~~~l 161 (225)
T 3uvj_A 135 NVTLANKFESCSVPRKINVSPTTYRLL 161 (225)
T ss_dssp HHHHHHHHHHTSCTTCEEECHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeEEECHHHHHhh
Confidence 999999999999999999999998854
No 4
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.97 E-value=2.4e-31 Score=230.11 Aligned_cols=154 Identities=24% Similarity=0.390 Sum_probs=139.4
Q ss_pred ccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhccc
Q psy16155 59 YYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAGW 137 (306)
Q Consensus 59 ~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G~ 137 (306)
.+++++++||||+||+|||.+++. +|++++.+||++|+.+++++ ++|.++.++|++||++|++||+|...
T Consensus 3 ~~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i--~~~~g~~~vk~~GD~~~a~fg~~~~~------- 73 (190)
T 3et6_A 3 PAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAI--EEYPQLYKVETIGDAYMVVCNVTVPC------- 73 (190)
T ss_dssp CCEEEEEEEEEEEEETTHHHHTTTSCHHHHHHHHHHHHHHHHHHG--GGCTTEEEEECTTSCEEEEESSSSCC-------
T ss_pred CccccceEEEEEeEecChhHhHhhCCHHHHHHHHHHHHHHHHHHH--HHcCCEEEEEEeCCEEEEEECCCCCc-------
Confidence 456889999999999999999999 99999999999999999999 55557888999999999999998753
Q ss_pred chhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHH
Q psy16155 138 TYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVN 217 (306)
Q Consensus 138 ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn 217 (306)
.+|+.+++++|++|++.+.+++.....++++|||||+|++++|++|.++++|+++|++||
T Consensus 74 --------------------~~~~~~a~~~al~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~v~G~~Vn 133 (190)
T 3et6_A 74 --------------------DDHADVLLEFALRMHEEASRVASSLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVN 133 (190)
T ss_dssp --------------------STHHHHHHHHHHHHHHHHHTSCCC---CCCEEEEEEEEEEEEEEECSSSCEEEEESHHHH
T ss_pred --------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeccEEEEecCCCcceEEecCcchh
Confidence 578999999999999999987766667899999999999999999998889999999999
Q ss_pred HHHHHHhcCCCCeEEEeccccccc
Q psy16155 218 LASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 218 ~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
+|+||++.+.+++|++|+++++..
T Consensus 134 ~Aarl~~~a~~~~I~vs~~~~~~l 157 (190)
T 3et6_A 134 TASRMESHGEAGQIHISEACYCCL 157 (190)
T ss_dssp HHHHHHHTSCTTSEEEEHHHHHHC
T ss_pred HHHHHHhcCCCCeEEECHHHHHHh
Confidence 999999999999999999998854
No 5
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.97 E-value=9.6e-32 Score=238.46 Aligned_cols=156 Identities=24% Similarity=0.419 Sum_probs=140.6
Q ss_pred ccccceeCcEEEEEEecCCcCcCCCC-C----hHHHHHHHHHHHHHHHHHHhcC-CCCcEEEEeEeCcEEEEeecCCccc
Q psy16155 57 ELYYEQYDSVSVMFATLVESHDTAPA-S----TLVSLEILNQIICDFDKILFVP-KASRVEKIKVAGWTYLAACGASRVE 130 (306)
Q Consensus 57 ~~~~~~~~~vtvlF~DI~gft~l~~~-~----~~~~v~~Ln~~~~~~d~~i~~~-~~~~~~~ik~~GD~~ma~~G~~~~~ 130 (306)
...+++++++||||+||+|||.+++. + |++++.+||++|+.+++++.++ +| +++++|++||+||++||.|...
T Consensus 4 ~~~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~-~g~~~k~~GD~~ma~fg~p~~~ 82 (219)
T 2wz1_A 4 PVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNP-FVYKVETVGDKYMTVSGLPEPC 82 (219)
T ss_dssp -CCCEEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCT-TCEEECCCTTCEEEEESSSSCC
T ss_pred ccCccceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccC-CEEEEeecCCEEEEEECCCCCC
Confidence 35678899999999999999999988 6 9999999999999999999322 57 9999999999999999999753
Q ss_pred hhhhcccchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccc
Q psy16155 131 KIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYD 210 (306)
Q Consensus 131 kik~~G~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~ 210 (306)
++|+.+|+++|++|++.+.+++.. ..++++|||||+|+|++|++|.++++|+
T Consensus 83 ---------------------------~~~a~~A~~~Al~~~~~~~~~~~~-~~~l~~rIGi~~G~v~~G~iG~~~~~~~ 134 (219)
T 2wz1_A 83 ---------------------------IHHARSICHLALDMMEIAGQVQVD-GESVQITIGIHTGEVVTGVIGQRMPRYC 134 (219)
T ss_dssp ---------------------------TTHHHHHHHHHHHHHHHHTTCEET-TEECCEEEEEEEEEEEEEEECSSSCEEE
T ss_pred ---------------------------hhHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEEEEEEEEEEEEeCCCceEEE
Confidence 578999999999999999887643 4589999999999999999999889999
Q ss_pred cccchHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 211 IWGDVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 211 v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
++|++||+|+||++.+.+++|++|+++++..
T Consensus 135 v~Gd~VN~AaRLe~~a~~~~IlvS~~~~~~l 165 (219)
T 2wz1_A 135 LFGNTVNLTSRTETTGEKGKINVSEYTYRCL 165 (219)
T ss_dssp EESHHHHHHHHHHHTSCTTSEEEEHHHHHHT
T ss_pred EECHHHHHHHHHHhcCCCCeEEECHHHHHHH
Confidence 9999999999999999999999999998843
No 6
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.97 E-value=6.5e-32 Score=236.92 Aligned_cols=154 Identities=32% Similarity=0.511 Sum_probs=141.0
Q ss_pred cccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhcc
Q psy16155 58 LYYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAG 136 (306)
Q Consensus 58 ~~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G 136 (306)
..+++++++||||+||+|||.+++. +|++++.+||++|+.+++++ ++| +++++|++||++|++||.|...
T Consensus 3 ~~~~~~~~vtvlf~DI~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i--~~~-gG~v~k~~GD~~ma~fg~p~~~------ 73 (204)
T 1yk9_A 3 IIADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELV--DQH-GLEKIEVSGDSYMVVSGVPRPR------ 73 (204)
T ss_dssp ---CCCSCEEEEEEEESCSSCSSCCCCSSSTTTHHHHHHTTTTGGG--TTS-SCEECCCSSSCEEEESCCSSCC------
T ss_pred CCccccCcEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEEEeCCeEEEEECCCCCC------
Confidence 3567789999999999999999998 89999999999999999999 777 9999999999999999999653
Q ss_pred cchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchH
Q psy16155 137 WTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVV 216 (306)
Q Consensus 137 ~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~V 216 (306)
.+|+.+|+++|++|++.+.+++.....++++|||||+|++++|++|..++.|+++|++|
T Consensus 74 ---------------------~~~a~~A~~~Al~~~~~~~~~~~~~~~~l~~rIGI~tG~v~~g~vG~~r~~~~v~G~~V 132 (204)
T 1yk9_A 74 ---------------------PDHTQALADFALDMTNVAAQLKDPRGNPVPLRVGLATGPVVAGVVGSRRFRYCVWGDAV 132 (204)
T ss_dssp ---------------------TTHHHHHHTHHHHHHHHTTTCCSSSCCCCCEEEEEEEECEEECCCCSSSCCCCEEEHHH
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeeEEEEEEecCCCceEEEEChHH
Confidence 47899999999999999998877766789999999999999999999989999999999
Q ss_pred HHHHHHHhcCCCCeEEEeccccccc
Q psy16155 217 NLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 217 n~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
|+|+||++.+.+++|++|+++++..
T Consensus 133 n~AaRle~~a~~g~I~vs~~~~~~l 157 (204)
T 1yk9_A 133 NVASRMESTDSVGQIQVPDEVYERL 157 (204)
T ss_dssp HHTTHHHHSCSTTCEEBCHHHHHCC
T ss_pred HHHHHHHhcCCCCeEEECHHHHHHh
Confidence 9999999999999999999998743
No 7
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=99.97 E-value=2.6e-30 Score=227.17 Aligned_cols=153 Identities=18% Similarity=0.226 Sum_probs=139.2
Q ss_pred ccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhccc
Q psy16155 59 YYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAGW 137 (306)
Q Consensus 59 ~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G~ 137 (306)
...+++++||||+||+|||.+++. +|++++.+||++|+.+++++ ++| +++++|++||++|++||.|...
T Consensus 8 l~~e~~~vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i--~~~-~G~v~k~~GD~~~a~fg~p~~~------- 77 (208)
T 2w01_A 8 MGGDRRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVI--THH-GGTIDEFMGDGILVLFGAPTSQ------- 77 (208)
T ss_dssp CCCEEEEEEEEEEECTTHHHHGGGSCHHHHHHHHHHHHHHHHHHH--HHT-TCEEEEEETTEEEEEESSSSCC-------
T ss_pred CCCeEEEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEEEEcCEEEEEECCCCCC-------
Confidence 346788999999999999999998 89999999999999999999 556 8999999999999999998653
Q ss_pred chhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhc----CCCceEeeecccceEEEEEeCC-CCcccccc
Q psy16155 138 TYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAAN----NHTFKLRIGIAHGAVTAGVVGS-QKPLYDIW 212 (306)
Q Consensus 138 ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~----~~~l~vrIGi~~G~v~~Gv~G~-~~~~y~v~ 212 (306)
++|+.+|+++|++|++.+.+++... ..++++|||||+|++++|++|. .+++|+++
T Consensus 78 --------------------~~~a~~Av~~Al~~~~~l~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~r~~~~v~ 137 (208)
T 2w01_A 78 --------------------QDDALRAVACGVEMQLALREVNQQVTGLGLQPLEMGIGINTGEVVVGNIGSEKRTKYGVV 137 (208)
T ss_dssp --------------------TTHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEEEEECSSCEEEEEE
T ss_pred --------------------hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeEEEEEEeCCCCeeEEEEE
Confidence 5789999999999999999887643 2478999999999999999998 78899999
Q ss_pred cchHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 213 GDVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 213 G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
|++||+|+||++.+.+++|++|+++++..
T Consensus 138 G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l 166 (208)
T 2w01_A 138 GAQVNLTYRIESYTTGGQIFISSTTLEAA 166 (208)
T ss_dssp SHHHHHHHHHHHTCCTTCEEEEHHHHHHH
T ss_pred CHHHHHHHHHHccCCCCeEEECHHHHHhh
Confidence 99999999999999999999999998843
No 8
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=99.96 E-value=3.5e-30 Score=228.28 Aligned_cols=156 Identities=21% Similarity=0.300 Sum_probs=139.1
Q ss_pred ccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhccc
Q psy16155 59 YYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAGW 137 (306)
Q Consensus 59 ~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G~ 137 (306)
...+++++||||+||+|||.+++. +|++++.+||++|+.+++++ .+| +++++|++||+||++||.|...
T Consensus 21 l~~e~~~vtvlF~DI~gfT~l~~~~~~~~~~~~Ln~~~~~~~~~i--~~~-gG~v~k~iGD~~ma~fg~p~~~------- 90 (219)
T 1wc3_A 21 MRPEPRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAV--FEN-QGTVDKFVGDAIMALYGAPEEM------- 90 (219)
T ss_dssp CCCEEEEEEEEEEEEESHHHHHHTSCHHHHHHHHHHHHHHHHHHH--HHT-TCEEEEEETTEEEEEESSSSCC-------
T ss_pred cCCceeEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEEEEcCeEEEEECCCCCC-------
Confidence 345678999999999999999998 89999999999999999999 555 8899999999999999998642
Q ss_pred chhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhc----------CCCceEeeecccceEEEEEeCC-CC
Q psy16155 138 TYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAAN----------NHTFKLRIGIAHGAVTAGVVGS-QK 206 (306)
Q Consensus 138 ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~----------~~~l~vrIGi~~G~v~~Gv~G~-~~ 206 (306)
...+++.+|+++|++|++.+.+++..+ ..++++|||||+|+|++|++|. .+
T Consensus 91 ------------------~~~~~a~~Av~~Al~~~~~l~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~r 152 (219)
T 1wc3_A 91 ------------------SPSEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQER 152 (219)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSTTCCCCEEEEEEEEEEEEEEEEEETTE
T ss_pred ------------------CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCccEEEEEEEeceEEEEEcCCCCe
Confidence 124788999999999999999887643 2479999999999999999998 77
Q ss_pred cccccccchHHHHHHHHhcCCCCeEEEecccccccC
Q psy16155 207 PLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPFGD 242 (306)
Q Consensus 207 ~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~~ 242 (306)
+.|+++|++||+|+||++.+.+++|++|+++++...
T Consensus 153 ~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~~~~~l~ 188 (219)
T 1wc3_A 153 SDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVP 188 (219)
T ss_dssp EEEEEESHHHHHHHHHHHHSCTTEEEEEHHHHTTSC
T ss_pred eEEEEECHHHHHHHHHHhcCCCCeEEECHHHHHhhc
Confidence 899999999999999999999999999999988543
No 9
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=99.96 E-value=6.9e-30 Score=222.16 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=138.6
Q ss_pred cceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhcccc
Q psy16155 60 YEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAGWT 138 (306)
Q Consensus 60 ~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G~t 138 (306)
..+++++||||+||+|||.+++. +|++++.+||++|..+++++ ++| +++++|++||++|++||.|...
T Consensus 4 ~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i--~~~-~G~v~k~~GD~~~a~fg~p~~~-------- 72 (198)
T 3r5g_A 4 ETQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIA--LKY-GGTIDKFVGDCVMVFFGDPSTQ-------- 72 (198)
T ss_dssp CCEEEEEEEEEEEEETHHHHHTTSCHHHHHHHHHHHHHHHHHHH--HHH-TCEEEEEETTEEEEEESSSSCS--------
T ss_pred CceEEEEEEEEEEccccchhhhhCCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEeeeCCEEEEEECCCccc--------
Confidence 45678999999999999999999 99999999999999999999 556 8999999999999999999753
Q ss_pred hhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhc-----CCCceEeeecccceEEEEEeCC-CCcccccc
Q psy16155 139 YLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAAN-----NHTFKLRIGIAHGAVTAGVVGS-QKPLYDIW 212 (306)
Q Consensus 139 y~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~-----~~~l~vrIGi~~G~v~~Gv~G~-~~~~y~v~ 212 (306)
...+++.+|+++|++|++.+..++... ..++++|||||+|++++|++|. .++.|+++
T Consensus 73 -----------------~~~~~a~~a~~~al~i~~~~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~~v~ 135 (198)
T 3r5g_A 73 -----------------GAKKDAVAAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTII 135 (198)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEEEEEEEeCCCcceEEEEE
Confidence 124788999999999999999887653 2479999999999999999998 57899999
Q ss_pred cchHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 213 GDVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 213 G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
|++||+|+||++.+.+++|++|+++++..
T Consensus 136 G~~Vn~Aarl~~~a~~~~I~vs~~~~~~l 164 (198)
T 3r5g_A 136 GREVNLASRLESASEAGEILISHETYSLI 164 (198)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCcEEECHHHHHHh
Confidence 99999999999999999999999998854
No 10
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=99.96 E-value=9e-29 Score=237.36 Aligned_cols=166 Identities=17% Similarity=0.101 Sum_probs=141.1
Q ss_pred cchHHHHHHHhccc-------HHHHHHHHccCCCC--------cccccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHH
Q psy16155 28 PDPLFKFYVAGGLA-------VLISELYLNVSRPY--------RELYYEQYDSVSVMFATLVESHDTAPA-STLVSLEIL 91 (306)
Q Consensus 28 ~~~~~~~lL~~~lP-------~~v~~~l~~~~~~~--------~~~~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~L 91 (306)
+++|.++||.+++| +.++++|+.+.... ...+.++++++||+|+||+|||.+++. +|.+++.+|
T Consensus 163 e~~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~~p~evv~lL 242 (407)
T 1y10_A 163 IAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLA 242 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhCCHHHHHHHH
Confidence 77889999999999 88998887763200 001223678999999999999999999 899999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhcccchhhccCCCCccccCCCCCCchHHHHHHHHHHHH
Q psy16155 92 NQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANM 171 (306)
Q Consensus 92 n~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~ 171 (306)
|++++.++.++ . + +++++|++||+||++||.|. .++++|++|
T Consensus 243 n~~~~~~~~i~--~-~-~g~~iKtiGDa~mavfg~p~----------------------------------~a~~~Al~m 284 (407)
T 1y10_A 243 GRLAGLARDLT--A-P-PVWFIKTIGDAVMLVCPDPA----------------------------------PLLDTVLKL 284 (407)
T ss_dssp HHHHHHHHHHC--C-T-TCEEEEEETTEEEEEESSHH----------------------------------HHHHHHHHH
T ss_pred HHHHHHHHHHH--H-c-CcEEEEEecceEEEEECCHH----------------------------------HHHHHHHHH
Confidence 99999888876 3 6 89999999999999998654 367899999
Q ss_pred HHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccccC
Q psy16155 172 LRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPFGD 242 (306)
Q Consensus 172 ~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~~ 242 (306)
++.+... ...+++|||||+|+|++|+ ||++|++||+|+||++.+.|++|+||+++++...
T Consensus 285 ~~~l~~~----~~~l~iRIGIhtG~Vv~Gv-------ydv~GdtVN~AsRLes~a~~g~I~vS~~t~~~l~ 344 (407)
T 1y10_A 285 VEVVDTD----NNFPRLRAGVASGMAVSRA-------GDWFGSPVNVASRVTGVARPGAVLVADSVREALG 344 (407)
T ss_dssp HHHHHTC----TTSCCEEEEEEEEEEEEET-------TEEEEHHHHHHHHHHHHCCTTCEEEEHHHHHSCC
T ss_pred HHHHHHh----CCCceEEEEEEEEEEEEec-------CccCCCHHHHHHHHHhcCCCCeEEECHHHHHHHh
Confidence 9887752 3578999999999999983 7999999999999999999999999999988543
No 11
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=99.95 E-value=4.2e-28 Score=216.58 Aligned_cols=147 Identities=14% Similarity=0.132 Sum_probs=126.5
Q ss_pred ccccceeCcEEEEEEecCCcCcCCCCChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhcc
Q psy16155 57 ELYYEQYDSVSVMFATLVESHDTAPASTLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAG 136 (306)
Q Consensus 57 ~~~~~~~~~vtvlF~DI~gft~l~~~~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G 136 (306)
...+++++++||||+||+|||.+++..|++++.+||++|+.+++++ .+| +++++|++||+||++||.|.
T Consensus 4 ~~~~~~~~~vtvlF~DI~gfT~l~~~~~~~~~~~l~~~~~~~~~~i--~~~-~G~v~k~~GD~~ma~fg~p~-------- 72 (235)
T 1fx2_A 4 RAPKEPTDPVTLIFTDIESSTALWAAHPDLMPDAVAAHHRMVRSLI--GRY-KCYEVKTVGDSFMIASKSPF-------- 72 (235)
T ss_dssp GSCCCTTSCEEEEEEEETTHHHHHHHCTTTHHHHHHHHHHHHHHHH--HHT-TCEEEEEETTEEEEEESCHH--------
T ss_pred cCCCCCCCcEEEEEEeccChHHHHHHCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEEEcCCeEEEEeCCHH--------
Confidence 3456788999999999999999998888899999999999999999 566 99999999999999998754
Q ss_pred cchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHH--------------HH----------------------
Q psy16155 137 WTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKF--------------NA---------------------- 180 (306)
Q Consensus 137 ~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~--------------~~---------------------- 180 (306)
.|+++|++|++.+... +.
T Consensus 73 --------------------------~A~~~Al~i~~~l~~~~w~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 126 (235)
T 1fx2_A 73 --------------------------AAVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVYS 126 (235)
T ss_dssp --------------------------HHHHHHHHHHHHHHHSCCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHHHHH
T ss_pred --------------------------HHHHHHHHHHHHHHhCCCchhHhhhhhhhhhhhccccccccCcccccccccccc
Confidence 2567777777765431 10
Q ss_pred hcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 181 ANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 181 ~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
....++++|||||+|+|++|++|. +++|+++|++||+|+||++.+.+++|++|+++++..
T Consensus 127 ~~~~~l~~riGIh~G~v~~G~~G~-~~~~~v~Gd~VN~AaRle~~a~~g~IlvS~~~~~~l 186 (235)
T 1fx2_A 127 RLWNGLRVRVGIHTGLCDIRHDEV-TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSL 186 (235)
T ss_dssp HHCCSCCEEEEEEEECCEEEECTT-SSSEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTS
T ss_pred ccccCcEEEEEEEeeEEEEEeccc-ccceEEECHHHHHHHHHHhhcCCCEEEECHHHHHHH
Confidence 112469999999999999999997 789999999999999999999999999999998844
No 12
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=99.94 E-value=5.4e-28 Score=208.72 Aligned_cols=141 Identities=17% Similarity=0.176 Sum_probs=123.7
Q ss_pred CcccccceeCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhh
Q psy16155 55 YRELYYEQYDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIK 133 (306)
Q Consensus 55 ~~~~~~~~~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik 133 (306)
++.....+++++||||+||+|||.+++. +|++++.+||++|+.+++++ ++| +++++|++||++|++||.|.
T Consensus 7 ~~~~~~~~~~~~tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i--~~~-gG~v~k~~GD~~ma~f~~p~----- 78 (184)
T 1ybt_A 7 HHHHGSAERMLATIMFTDIVGSTQHAAALGDDRWRDLLDNHDTIVCHEI--QRF-GGREVNTAGDGFVATFTSPS----- 78 (184)
T ss_dssp ------CEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHT-TCEECCCSSSSEEEEESCHH-----
T ss_pred CCCCCCCceEEEEEEEEECcCcHHHHHhCCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEeEeCCEEEEEeCCHH-----
Confidence 3455677889999999999999999999 89999999999999999999 556 99999999999999998552
Q ss_pred hcccchhhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCccccccc
Q psy16155 134 VAGWTYLAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWG 213 (306)
Q Consensus 134 ~~G~ty~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G 213 (306)
+|+++|++|++.+.++ ++++|||||+|++++|.+|.. |+++|
T Consensus 79 -----------------------------~A~~~Al~~~~~l~~~------~l~~riGi~~G~v~~g~ig~~---~~~~G 120 (184)
T 1ybt_A 79 -----------------------------AAIACADDIVDAVAAL------GIEVRIGIHAGEVEVRDASHG---TDVAG 120 (184)
T ss_dssp -----------------------------HHHHHHHHHHHHHHTT------TCCEEEEEEEEEEEEEECSSC---EEEES
T ss_pred -----------------------------HHHHHHHHHHHHHHhc------CCcEEEEEEEeEEEEEecCCC---ceEEC
Confidence 4789999999988765 389999999999999988864 99999
Q ss_pred chHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 214 DVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 214 ~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
++||+|+||++.+.+++|++|+++++..
T Consensus 121 ~~Vn~AaRl~~~a~~g~IlvS~~~~~~l 148 (184)
T 1ybt_A 121 VAVHIGARVCALAGPSEVLVSSTVRDIV 148 (184)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEHHHHHHT
T ss_pred cHHHHHHHHHhcCCCCEEEECHHHHHhh
Confidence 9999999999999999999999998854
No 13
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=99.93 E-value=4.5e-26 Score=196.96 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=121.2
Q ss_pred ceeCcEEEEEEecCCcCcCCCCChHHHHHHHHHHHHH-HHHHHhcCCCCcEEEEeEeCcEEEEeecCCccchhhhcccch
Q psy16155 61 EQYDSVSVMFATLVESHDTAPASTLVSLEILNQIICD-FDKILFVPKASRVEKIKVAGWTYLAACGASRVEKIKVAGWTY 139 (306)
Q Consensus 61 ~~~~~vtvlF~DI~gft~l~~~~~~~~v~~Ln~~~~~-~d~~i~~~~~~~~~~ik~~GD~~ma~~G~~~~~kik~~G~ty 139 (306)
.+++++||||+||+|||.+++..+++.+..||++|.. +++++ ++| +++++|++||++|++||.+
T Consensus 3 ~e~r~vtvlf~Di~gft~l~~~~~~~~~~~l~~~~~~~~~~~i--~~~-~G~v~k~~GD~~~a~f~~~------------ 67 (189)
T 3mr7_A 3 AERRLCAILAADMAGYSRLMERNETDVLNRQKLYRRELIDPAI--AQA-GGQIVKTTGDGMLARFDTA------------ 67 (189)
T ss_dssp CEEEEEEEEEEEECCCCGGGCCCCHHHHHHHHHHHHHTHHHHH--HHT-TCEEEEEETTEEEEEESSH------------
T ss_pred CcEEEEEEEEEEchhhHHHHhhCCHHHHHHHHHHHHHHHHHHH--HHc-CCEEEEEeCCEEEEEeCCH------------
Confidence 4678999999999999999999555566889999988 99999 556 9999999999999999843
Q ss_pred hhccCCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhcC--CCceEeeecccceEEEEEeCCCCcccccccchHH
Q psy16155 140 LAACGLEPSVRSASGEDNTHPLVMMTCFAANMLRVLRKFNAANN--HTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVN 217 (306)
Q Consensus 140 ~aa~gl~~~~~~~~~~~~~~~a~~av~~a~~~~~~~~~~~~~~~--~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn 217 (306)
.+|+++|++|++.+.+++.... .++++|||||+|++++| .|+++|++||
T Consensus 68 ----------------------~~A~~~Al~i~~~l~~~~~~~~~~~~l~~riGi~~G~v~~g-------~~~~~G~~Vn 118 (189)
T 3mr7_A 68 ----------------------QAALRCALEIQQAMQQREEDTPRKERIQYRIGINIGDIVLE-------DGDIFGDAVN 118 (189)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHTTTSCGGGCCCEEEEEEEEEEEEC-------SSCEESHHHH
T ss_pred ----------------------HHHHHHHHHHHHHHHHHhhhcccCCceeEEEEEEEEEEEEE-------CCeEEChHHH
Confidence 3679999999999999886543 37999999999999998 6899999999
Q ss_pred HHHHHHhcCCCCeEEEeccccccc
Q psy16155 218 LASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 218 ~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
+|+||++.+.+++|++|+++++..
T Consensus 119 ~AaRl~~~a~~~~I~vs~~~~~~l 142 (189)
T 3mr7_A 119 VAARLEAISEPGAICVSDIVHQIT 142 (189)
T ss_dssp HHHHHHHHSCTTCEEEEHHHHHHH
T ss_pred HHHHHHhhCCCCeEEECHHHHHhh
Confidence 999999999999999999998854
No 14
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.55 E-value=3.4e-15 Score=132.24 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPF 240 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l 240 (306)
+..++.+.......+......+... +-=..||.++.++|.+....+..-+++.+|..|++..... ..+.
T Consensus 34 ~~~~~~~ln~~~~~~~~~i~~~~g~----v~k~~GD~~ma~fg~p~~~~~~a~~a~~~al~~~~~~~~~-------~~~~ 102 (225)
T 3uvj_A 34 PLQVITMLNALYTRFDQQCGELDVY----KVETIGDAYCVAGGLHKESDTHAVQIALMALKMMELSDEV-------MSPH 102 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCE----EECCSTTCEEEEESSSSCCTTHHHHHHHHHHHHHHHHTTS-------BCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeE----EEEeeCcEEEEEECCCCCchHHHHHHHHHHHHHHHHHHHH-------Hhhc
Confidence 3466677777777777766665432 2224689999999998888899999999999998853321 1111
Q ss_pred cCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 241 GDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 241 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
...+++++ |+|+|+|++|++|+++|.||+|||+||+||||++.+.||+|
T Consensus 103 ~~~l~~ri-----------------Gih~G~v~~G~iG~~~~~~~~~Gd~VN~AaRle~~a~~~~I 151 (225)
T 3uvj_A 103 GEPIKMRI-----------------GLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKI 151 (225)
T ss_dssp SCBCCEEE-----------------EEEEEEEEEEEECC-CCEEEEESHHHHHHHHHHHTSCTTCE
T ss_pred CCceEEEE-----------------EEEeccEEEEEecCCCceEEEECcHHHHHHHHHhcCCCCeE
Confidence 23566676 99999999999999999999999999999999999999986
No 15
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.52 E-value=2.2e-14 Score=123.35 Aligned_cols=119 Identities=22% Similarity=0.286 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPF 240 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l 240 (306)
+..++.+.......+.+....+.....++ ..||.++.++|.+....+..-.++..|.+|++.... ...+.
T Consensus 29 ~~~~~~~l~~~~~~~~~~i~~~~g~~~vk---~~GD~~~a~fg~~~~~~~~~~~a~~~al~~~~~~~~-------~~~~~ 98 (190)
T 3et6_A 29 PLEVXSLLDELYQRFDAAIEEYPQLYKVE---TIGDAYMVVCNVTVPCDDHADVLLEFALRMHEEASR-------VASSL 98 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCTTEEEEE---CTTSCEEEEESSSSCCSTHHHHHHHHHHHHHHHHHT-------SCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEEE---EeCCEEEEEECCCCCchhHHHHHHHHHHHHHHHHHH-------HHhcc
Confidence 34566777777777777776654433322 358999999999888888888999999999875321 11111
Q ss_pred cCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 241 GDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 241 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
...+.+++ |+|+|++++|++|+.++.||+|||+||+|+||++.+.||+|
T Consensus 99 ~~~l~~ri-----------------Gi~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~~~I 147 (190)
T 3et6_A 99 GEPVRIRV-----------------GMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQI 147 (190)
T ss_dssp --CCCEEE-----------------EEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSE
T ss_pred CCCceEEE-----------------EEEeccEEEEecCCCcceEEecCcchhHHHHHHhcCCCCeE
Confidence 22466665 99999999999999999999999999999999999999986
No 16
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.51 E-value=6.8e-15 Score=130.12 Aligned_cols=118 Identities=20% Similarity=0.155 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPF 240 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l 240 (306)
+..++.+..+....+.++...+...+.- ..||.++.++|.+.+..+..-+++..|..|++.... +.+ ..
T Consensus 54 ~~~~~~~Ln~~~~~~~~~i~~~gG~v~k----~iGD~~ma~fg~p~~~~~~a~~Av~~Al~m~~~l~~----~~~---~~ 122 (220)
T 1azs_A 54 AQELVMTLNELFARFDKLAAENHCLRIK----ILGDCYYCVSGLPEARADHAHCCVEMGMDMIEAISL----VRE---MT 122 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTEEEEE----EETTEEEEEESCSSCCSTHHHHHHHHHHHHHHHHHH----HHH---HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEEE----EeCCeEEEEECCCCCChHHHHHHHHHHHHHHHHHHH----HHh---hc
Confidence 3456677777777777777666543222 347999999999888888888899999998774221 000 01
Q ss_pred cCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 241 GDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 241 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
...+.+++ |+++|+|++|++|++++.||+|||+||+|+||++.+.||+|
T Consensus 123 ~~~l~irI-----------------GI~tG~v~~G~vG~~~~~y~v~Gd~VN~AaRLe~~a~~g~I 171 (220)
T 1azs_A 123 GVNVNMRV-----------------GIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRI 171 (220)
T ss_dssp CSCCEEEE-----------------EEEEEEEEEEECSSSSCCCEEESHHHHHHHHHHHTCCTTSE
T ss_pred CCCcEEEE-----------------EEEEeEEEEEEeCCCCcEEEEEchHHHHHHHHHhcCCCCeE
Confidence 22556665 99999999999999999999999999999999999999986
No 17
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=99.48 E-value=3.3e-14 Score=125.50 Aligned_cols=119 Identities=25% Similarity=0.309 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCceEeeecccceEEEEEeCCCC-----------cccccccchHHHHHHHHhcCCCC
Q psy16155 162 VMMTCFAANMLRVLRKFNAANN-HTFKLRIGIAHGAVTAGVVGSQK-----------PLYDIWGDVVNLASRMDSTGLPN 229 (306)
Q Consensus 162 ~~av~~a~~~~~~~~~~~~~~~-~~l~vrIGi~~G~v~~Gv~G~~~-----------~~y~v~G~~Vn~A~rm~~~a~~g 229 (306)
...+.+..++...+..+...+. .. +.+-=..||.++.++|.+. ...++.-+++..|..|++....
T Consensus 39 ~~~~~~Ln~~~~~~~~~i~~~~~~g--~~~ik~iGD~~ma~fg~p~~~~~~~~~~~~~~~~~a~~a~~~Al~~~~~l~~- 115 (220)
T 1ab8_A 39 LECLRLLNEIIADFDDLLSKPKFSG--VEKIKTIGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLDA- 115 (220)
T ss_dssp HHHHHHHHHHHHHHHGGGGSGGGTT--EEEEEEETTEEEEEECCCCSCCC--------CCHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCC--eEEEEEeCceEEEEECCCccccccccccccccHHHHHHHHHHHHHHHHHHHH-
Confidence 4566666677777766655431 11 1111245899999999865 3456677888999988764211
Q ss_pred eEEEecccccccCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 230 EIQVFGFYPPFGDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 230 ~i~Is~~~~~l~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
+.+ .....+.+++ |+|+|+|++|++|+++|.||+|||+||+|+||++.+.||+|
T Consensus 116 ---~~~---~~~~~l~~rI-----------------GIh~G~v~~G~iG~~r~~y~v~Gd~VN~AaRle~~a~~g~I 169 (220)
T 1ab8_A 116 ---INK---HSFNDFKLRV-----------------GINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKI 169 (220)
T ss_dssp ---HHT---TTTCCCCCEE-----------------EEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTCCTTCE
T ss_pred ---Hhh---ccCCceEEEE-----------------EEEeeeEEEEeecCCceeEEEECcHHHHHHHHHhcCCCCeE
Confidence 001 1123566776 99999999999999999999999999999999999999986
No 18
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.47 E-value=3.1e-14 Score=125.67 Aligned_cols=120 Identities=18% Similarity=0.252 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPF 240 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l 240 (306)
+..++.+...+.+.+..+....... ...+-=..||.++.++|.+.++.++.-+++..|.+|++....-.. .
T Consensus 36 ~~~~~~~Ln~~~~~~~~~i~~~~~~-~g~~~k~~GD~~ma~fg~p~~~~~~a~~A~~~Al~~~~~~~~~~~----~---- 106 (219)
T 2wz1_A 36 AMKIVNLLNDLYTRFDTLTDSRKNP-FVYKVETVGDKYMTVSGLPEPCIHHARSICHLALDMMEIAGQVQV----D---- 106 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCT-TCEEECCCTTCEEEEESSSSCCTTHHHHHHHHHHHHHHHHTTCEE----T----
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccC-CEEEEeecCCEEEEEECCCCCChhHHHHHHHHHHHHHHHHHHHhc----c----
Confidence 4556677777777777665522110 111212568999999999888888888999999999886443211 1
Q ss_pred cCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 241 GDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 241 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
...+++++ |+|+|+|++|++|+.++.||+|||+||+|+||++.+.||+|
T Consensus 107 ~~~l~~rI-----------------Gi~~G~v~~G~iG~~~~~~~v~Gd~VN~AaRLe~~a~~~~I 155 (219)
T 2wz1_A 107 GESVQITI-----------------GIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKI 155 (219)
T ss_dssp TEECCEEE-----------------EEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSE
T ss_pred CCceEEEE-----------------EEEEEEEEEEEeCCCceEEEEECHHHHHHHHHHhcCCCCeE
Confidence 23566665 99999999999999999999999999999999999999986
No 19
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=99.43 E-value=8e-14 Score=121.80 Aligned_cols=121 Identities=17% Similarity=0.052 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEeccccccc
Q psy16155 162 VMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPFG 241 (306)
Q Consensus 162 ~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~ 241 (306)
..++.+.....+.+.+....+...+.- ..||.++.++|.+.++.+..-+++..|..|+.....-+-.... .-.
T Consensus 35 ~~~~~~l~~~~~~~~~~i~~~~G~v~k----~~GD~~~a~fg~p~~~~~~a~~Av~~Al~~~~~l~~~~~~~~~---~~~ 107 (208)
T 2w01_A 35 EEVVKVLNIYFGKMADVITHHGGTIDE----FMGDGILVLFGAPTSQQDDALRAVACGVEMQLALREVNQQVTG---LGL 107 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEE----EETTEEEEEESSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHT---TTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEE----EEcCEEEEEECCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhh---cCC
Confidence 456666777777777777766654332 3479999999998888888888999998887642110000000 011
Q ss_pred CcccCCCcceeeeeeeeeeeeeeecccccceEEEeeecc-CceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 242 DNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQ-KPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 242 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
..+++++ |+|+|++++|++|+. ++.||+|||+||+|+||++.+.||+|
T Consensus 108 ~~l~~ri-----------------Gi~~G~v~~g~vG~~~r~~~~v~G~~Vn~AaRl~~~a~~~~I 156 (208)
T 2w01_A 108 QPLEMGI-----------------GINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIESYTTGGQI 156 (208)
T ss_dssp CCCCCEE-----------------EEEEEEEEEEEEECSSCEEEEEESHHHHHHHHHHHTCCTTCE
T ss_pred CceEEEE-----------------EEEeeEEEEEEeCCCCeeEEEEECHHHHHHHHHHccCCCCeE
Confidence 2566666 999999999999984 89999999999999999999999986
No 20
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.37 E-value=1.5e-13 Score=119.86 Aligned_cols=114 Identities=26% Similarity=0.315 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccccCcc
Q psy16155 165 TCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPFGDNI 244 (306)
Q Consensus 165 v~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~~gi 244 (306)
+.+.......+.++...+.. .+-=..||.++.++|.+.++.+..-+++..|..|++...... . +....+
T Consensus 34 ~~~ln~~~~~~~~~i~~~gG----~v~k~~GD~~ma~fg~p~~~~~~a~~A~~~Al~~~~~~~~~~----~---~~~~~l 102 (204)
T 1yk9_A 34 VRFLDRLYSAFDELVDQHGL----EKIEVSGDSYMVVSGVPRPRPDHTQALADFALDMTNVAAQLK----D---PRGNPV 102 (204)
T ss_dssp TTHHHHHHTTTTGGGTTSSC----EECCCSSSCEEEESCCSSCCTTHHHHHHTHHHHHHHHTTTCC----S---SSCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCC----EEEEEeCCeEEEEECCCCCChHHHHHHHHHHHHHHHHHHHHH----h---ccCCCc
Confidence 34444444444444433332 233356899999999988888888899999999988643321 1 112356
Q ss_pred cCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 245 HLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
++++ |+|+|++++|++|++++.||+|||+||+|+||++.+.||+|
T Consensus 103 ~~rI-----------------GI~tG~v~~g~vG~~r~~~~v~G~~Vn~AaRle~~a~~g~I 147 (204)
T 1yk9_A 103 PLRV-----------------GLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQI 147 (204)
T ss_dssp CEEE-----------------EEEEECEEECCCCSSSCCCCEEEHHHHHTTHHHHSCSTTCE
T ss_pred eEEE-----------------EEEeeEEEEEEecCCCceEEEEChHHHHHHHHHhcCCCCeE
Confidence 6665 99999999999999999999999999999999999999986
No 21
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=99.33 E-value=3.7e-12 Score=109.97 Aligned_cols=123 Identities=20% Similarity=0.119 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcc--cccccchHHHHHHHHhcCCCCeEEEecccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPL--YDIWGDVVNLASRMDSTGLPNEIQVFGFYP 238 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~--y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~ 238 (306)
+..++.+.....+.+.+....+...+.- ..||.++.++|.+..+ .+..-+++..|..|++....-+-.... .
T Consensus 29 ~~~~~~~l~~~~~~~~~~i~~~~G~v~k----~~GD~~~a~fg~p~~~~~~~~a~~a~~~al~i~~~~~~~~~~~~~--~ 102 (198)
T 3r5g_A 29 AEALTDLLNNYLNEMSKIALKYGGTIDK----FVGDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHMKVLRQQWRA--Q 102 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEE----EETTEEEEEESSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEe----eeCCEEEEEECCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHh--c
Confidence 4566677777777888777776654332 2479999999987654 456667788888886542110000000 0
Q ss_pred cccCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeecc-CceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 239 PFGDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQ-KPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 239 ~l~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
.....++.++ |+|+|++++|++|+. ++.||+|||+||+|+||++.+.||+|
T Consensus 103 ~~~~~l~~ri-----------------Gi~~G~v~~g~vG~~~~~~~~v~G~~Vn~Aarl~~~a~~~~I 154 (198)
T 3r5g_A 103 GITKPLEIRM-----------------GINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEI 154 (198)
T ss_dssp TCCSCCEEEE-----------------EEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHCCTTCE
T ss_pred CCCCceEEEE-----------------EEEEEEEEEEEeCCCcceEEEEECcHHHHHHHHHhhCCCCcE
Confidence 0112455565 999999999999997 78999999999999999999999986
No 22
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=99.33 E-value=2e-12 Score=113.91 Aligned_cols=124 Identities=15% Similarity=0.067 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCc--ccccccchHHHHHHHHhcCCCCeEEEecc---
Q psy16155 162 VMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKP--LYDIWGDVVNLASRMDSTGLPNEIQVFGF--- 236 (306)
Q Consensus 162 ~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~--~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~--- 236 (306)
..++.+.....+.+.+....+...+.- ..||.++.++|.+.. ..+..-+++..|.+|++....-+-...+.
T Consensus 48 ~~~~~~Ln~~~~~~~~~i~~~gG~v~k----~iGD~~ma~fg~p~~~~~~~~a~~Av~~Al~~~~~l~~~~~~~~~~~~~ 123 (219)
T 1wc3_A 48 QGVAELLNEYLGEMTRAVFENQGTVDK----FVGDAIMALYGAPEEMSPSEQVRRAIATARQMLVALEKLNQGWQERGLV 123 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEE----EETTEEEEEESSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEE----EEcCeEEEEECCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 456667777777777777766654432 357999999998653 34556678888888876421100000000
Q ss_pred cccccCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeecc-CceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 237 YPPFGDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQ-KPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 237 ~~~l~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
.......+.+++ |+++|+|++|+||+. ++.||+|||+||+|+||++.+.||+|
T Consensus 124 ~~~~~~~l~~rI-----------------GIh~G~v~~G~vG~~~r~~y~v~Gd~VN~AaRLe~~a~~g~I 177 (219)
T 1wc3_A 124 GRNEVPPVRFRC-----------------GIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSI 177 (219)
T ss_dssp SSTTCCCCEEEE-----------------EEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHSCTTEE
T ss_pred cccCCCccEEEE-----------------EEEeceEEEEEcCCCCeeEEEEECHHHHHHHHHHhcCCCCeE
Confidence 000112455565 999999999999985 89999999999999999999999976
No 23
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=99.25 E-value=6.3e-12 Score=111.48 Aligned_cols=114 Identities=15% Similarity=0.034 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeE---EE-------
Q psy16155 164 MTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI---QV------- 233 (306)
Q Consensus 164 av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i---~I------- 233 (306)
.+.+.....+.+.++...+...+.- ..||.++.++|.+. +++..|..|+........ .+
T Consensus 34 ~~~~l~~~~~~~~~~i~~~~G~v~k----~~GD~~ma~fg~p~-------~A~~~Al~i~~~l~~~~w~~~~l~~~~~~~ 102 (235)
T 1fx2_A 34 MPDAVAAHHRMVRSLIGRYKCYEVK----TVGDSFMIASKSPF-------AAVQLAQELQLCFLHHDWGTNALDDSYREF 102 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEE----EETTEEEEEESCHH-------HHHHHHHHHHHHHHHSCCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEE----EcCCeEEEEeCCHH-------HHHHHHHHHHHHHHhCCCchhHhhhhhhhh
Confidence 4455666677777777766554332 34799999999753 577888887764210000 00
Q ss_pred -----------eccc--------ccccCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhh
Q psy16155 234 -----------FGFY--------PPFGDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLA 294 (306)
Q Consensus 234 -----------s~~~--------~~l~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a 294 (306)
...+ .....++.+++ |+|+|++++|++|. ++.||+|||+||+|
T Consensus 103 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ri-----------------GIh~G~v~~G~~G~-~~~~~v~Gd~VN~A 164 (235)
T 1fx2_A 103 EEQRAEGECEYTPPTAHMDPEVYSRLWNGLRVRV-----------------GIHTGLCDIRHDEV-TKGYDYYGRTPNMA 164 (235)
T ss_dssp HHHHHHHCSSCCCSSTTSCHHHHHHHCCSCCEEE-----------------EEEEECCEEEECTT-SSSEEEESHHHHHH
T ss_pred hhhccccccccCccccccccccccccccCcEEEE-----------------EEEeeEEEEEeccc-ccceEEECHHHHHH
Confidence 0000 00113566676 99999999999998 88999999999999
Q ss_pred hhhhhcCCCCCC
Q psy16155 295 SRMDSTGLPNEI 306 (306)
Q Consensus 295 ~~~~~~~~~~~~ 306 (306)
|||++.+.||+|
T Consensus 165 aRle~~a~~g~I 176 (235)
T 1fx2_A 165 ARTESVANGGQV 176 (235)
T ss_dssp HHHHHTCCTTCE
T ss_pred HHHHhhcCCCEE
Confidence 999999999986
No 24
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=99.08 E-value=6.3e-11 Score=101.54 Aligned_cols=102 Identities=11% Similarity=-0.071 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPF 240 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l 240 (306)
...++.+.....+.+.+....+...+. =..||.++.++|.+. +++..|..|++....
T Consensus 37 ~~~~~~~l~~~~~~~~~~i~~~gG~v~----k~~GD~~ma~f~~p~-------~A~~~Al~~~~~l~~------------ 93 (184)
T 1ybt_A 37 DDRWRDLLDNHDTIVCHEIQRFGGREV----NTAGDGFVATFTSPS-------AAIACADDIVDAVAA------------ 93 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEC----CCSSSSEEEEESCHH-------HHHHHHHHHHHHHHT------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEE----eEeCCEEEEEeCCHH-------HHHHHHHHHHHHHHh------------
Confidence 445667777777777777766654322 235899999998752 688889999875321
Q ss_pred cCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 241 GDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 241 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
.++++++ |+|+|++++|.+|.. ||+|||+||+|+||++.+.||+|
T Consensus 94 -~~l~~ri-----------------Gi~~G~v~~g~ig~~---~~~~G~~Vn~AaRl~~~a~~g~I 138 (184)
T 1ybt_A 94 -LGIEVRI-----------------GIHAGEVEVRDASHG---TDVAGVAVHIGARVCALAGPSEV 138 (184)
T ss_dssp -TTCCEEE-----------------EEEEEEEEEEECSSC---EEEESHHHHHHHHHHHHSCTTCE
T ss_pred -cCCcEEE-----------------EEEEeEEEEEecCCC---ceEECcHHHHHHHHHhcCCCCEE
Confidence 1355565 899999999987774 99999999999999999999986
No 25
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=99.08 E-value=5.7e-11 Score=113.80 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccc
Q psy16155 161 LVMMTCFAANMLRVLRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPF 240 (306)
Q Consensus 161 a~~av~~a~~~~~~~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l 240 (306)
+..++.+........+.+.. +. . .+-=..||.++.++|.+. +++++|.+|++.... .
T Consensus 235 p~evv~lLn~~~~~~~~i~~-~~-g---~~iKtiGDa~mavfg~p~-------~a~~~Al~m~~~l~~-----------~ 291 (407)
T 1y10_A 235 AEELGHLAGRLAGLARDLTA-PP-V---WFIKTIGDAVMLVCPDPA-------PLLDTVLKLVEVVDT-----------D 291 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-TT-C---EEEEEETTEEEEEESSHH-------HHHHHHHHHHHHHHT-----------C
T ss_pred HHHHHHHHHHHHHHHHHHHH-cC-c---EEEEEecceEEEEECCHH-------HHHHHHHHHHHHHHH-----------h
Confidence 34555655555555555433 21 1 122245899999999753 588899988875322 0
Q ss_pred cCcccCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 241 GDNIHLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 241 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
...+.+++ |||+|+|++|+ ||+|||+||+||||++++.||+|
T Consensus 292 ~~~l~iRI-----------------GIhtG~Vv~Gv-------ydv~GdtVN~AsRLes~a~~g~I 333 (407)
T 1y10_A 292 NNFPRLRA-----------------GVASGMAVSRA-------GDWFGSPVNVASRVTGVARPGAV 333 (407)
T ss_dssp TTSCCEEE-----------------EEEEEEEEEET-------TEEEEHHHHHHHHHHHHCCTTCE
T ss_pred CCCceEEE-----------------EEEEEEEEEec-------CccCCCHHHHHHHHHhcCCCCeE
Confidence 12345565 99999999993 99999999999999999999987
No 26
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=98.82 E-value=1.8e-09 Score=92.42 Aligned_cols=101 Identities=16% Similarity=0.075 Sum_probs=68.0
Q ss_pred HHHHHHHHH-HHHHHHhcCCCceEeeecccceEEEEEeCCCCcccccccchHHHHHHHHhcCCCCeEEEecccccccCcc
Q psy16155 166 CFAANMLRV-LRKFNAANNHTFKLRIGIAHGAVTAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEIQVFGFYPPFGDNI 244 (306)
Q Consensus 166 ~~a~~~~~~-~~~~~~~~~~~l~vrIGi~~G~v~~Gv~G~~~~~y~v~G~~Vn~A~rm~~~a~~g~i~Is~~~~~l~~gi 244 (306)
......... +.+....+...+.- ..||.++.++|.+ -+++..|..|+...... ...+.....+
T Consensus 31 ~~l~~~~~~~~~~~i~~~~G~v~k----~~GD~~~a~f~~~-------~~A~~~Al~i~~~l~~~-----~~~~~~~~~l 94 (189)
T 3mr7_A 31 NRQKLYRRELIDPAIAQAGGQIVK----TTGDGMLARFDTA-------QAALRCALEIQQAMQQR-----EEDTPRKERI 94 (189)
T ss_dssp HHHHHHHHHTHHHHHHHTTCEEEE----EETTEEEEEESSH-------HHHHHHHHHHHHHHHHH-----TTTSCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEE----EeCCEEEEEeCCH-------HHHHHHHHHHHHHHHHH-----hhhcccCCce
Confidence 333444443 55555555543322 3479999999853 46788888887642110 0011112356
Q ss_pred cCCCcceeeeeeeeeeeeeeecccccceEEEeeeccCceeeeeccchhhhhhhhhcCCCCCC
Q psy16155 245 HLPKFFFFFFFFFFFFFFFFFFFFFFFFLAGVVGSQKPLYDIWGDVVNLASRMDSTGLPNEI 306 (306)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~a~~~~~~~~~~~~ 306 (306)
++++ |+|+|++++| .||+|||+||+|+||++.+.||+|
T Consensus 95 ~~ri-----------------Gi~~G~v~~g-------~~~~~G~~Vn~AaRl~~~a~~~~I 132 (189)
T 3mr7_A 95 QYRI-----------------GINIGDIVLE-------DGDIFGDAVNVAARLEAISEPGAI 132 (189)
T ss_dssp CEEE-----------------EEEEEEEEEC-------SSCEESHHHHHHHHHHHHSCTTCE
T ss_pred eEEE-----------------EEEEEEEEEE-------CCeEEChHHHHHHHHHhhCCCCeE
Confidence 6665 9999999999 899999999999999999999986
No 27
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=96.09 E-value=0.0076 Score=42.49 Aligned_cols=40 Identities=5% Similarity=-0.149 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhhc----cchHHHHHHHhcccHHHHHHHHcc
Q psy16155 12 CLTFEHWRWEYLFLQL----PDPLFKFYVAGGLAVLISELYLNV 51 (306)
Q Consensus 12 ~~~~~~~~~~~~~~~~----~~~~~~~lL~~~lP~~v~~~l~~~ 51 (306)
...++....+++++.+ ++++.++||.+++|++|++.|+.|
T Consensus 23 ~~~lE~~~~~Lee~t~~L~~EK~ktd~LL~~mLP~~VA~~Lk~G 66 (66)
T 3hls_A 23 TQELEMLTDRLQLTLRALEDEKKKTDTLLYSVLPPSVANELRHK 66 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHhCc
Confidence 3344555555554444 999999999999999999999864
No 28
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=89.80 E-value=1.8 Score=38.53 Aligned_cols=61 Identities=11% Similarity=0.048 Sum_probs=49.6
Q ss_pred eeCcEEEEEEecCCcCc-CCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 62 QYDSVSVMFATLVESHD-TAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 62 ~~~~vtvlF~DI~gft~-l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
....++|.-.||.++|. ..+. .+-+......+++..+.+.+ +++ ++.....-||.||+++.
T Consensus 128 ~dsqIaVahiDI~d~t~~~t~~~s~yd~~~~~l~l~~~Ll~y~--~~i-gG~lf~iGgdny~iftt 190 (268)
T 2qv6_A 128 VDGYVQIAHIDINNITGTLTDIVSAYDTYLNVNKVKLALMEEL--LKY-NALLFFIGGDNFMAPSN 190 (268)
T ss_dssp SSCCEEEEEEEETTHHHHTTTTSCHHHHHHHHHHHHHHHHHHH--HTT-TCCCEEEETTEEEEECT
T ss_pred CcCceEEEEEEecCccccccccCChHHHHHHHHHHHHHHHHHH--HHh-CCEEEEECCCEEEEEeC
Confidence 35689999999999998 4444 88898888999999999999 455 66666678999999864
No 29
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=87.67 E-value=5.6 Score=32.48 Aligned_cols=59 Identities=8% Similarity=0.048 Sum_probs=38.3
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
...++++.||.+|..+-+. +....=.+|..+-..+.+.+ .+. +...-++-||.++++..
T Consensus 60 ~~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~--~~~-~~~~~R~~~d~F~il~~ 119 (206)
T 3i5c_A 60 SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC--SRS-SDLAARYGGEEFAMVLP 119 (206)
T ss_dssp CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTC--CST-TCEEEEEETTEEEEEEE
T ss_pred CcEEEEEEECcchhHHHhccChhHHHHHHHHHHHHHHHhc--CCC-CcEEEEecCCeEEEEEC
Confidence 3689999999999998777 55554344444444444433 122 33445688999988753
No 30
>3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens}
Probab=81.43 E-value=23 Score=31.98 Aligned_cols=57 Identities=12% Similarity=0.041 Sum_probs=36.9
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEee
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAAC 124 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~ 124 (306)
...++++.||.+|..+-+. +....=.+|..+-..+.+.+ .. +...-++-||.+.++.
T Consensus 212 ~~~all~idId~fk~INd~~G~~~gD~lL~~va~~L~~~~--~~--~d~v~R~ggdeF~ill 269 (342)
T 3ezu_A 212 SNVGIMLIDLDYFKLVGDNYGHQTGDRILQLVAETITSHL--RR--SDVVGRYDGDEFVVYL 269 (342)
T ss_dssp CEEEEEEEEEEECCCCC-----CHHHHHHHHHHHHHHHTC--CT--TCEEEECSSSEEEEEE
T ss_pred CcEEEEEEECCcHHHHHHhhChHHHHHHHHHHHHHHHHHC--CC--CcEEEEEcCCEEEEEE
Confidence 4689999999999999888 55444445555555555555 21 3334568899998876
No 31
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=70.18 E-value=9.1 Score=31.53 Aligned_cols=57 Identities=7% Similarity=0.066 Sum_probs=36.7
Q ss_pred cEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 65 SVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 65 ~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
..++++.||-+|..+-+. +-..-=.+|..+-..+.+.+ .. +....++-||-++++..
T Consensus 33 ~~~l~~iDiD~FK~INd~~Gh~~GD~vL~~va~~L~~~~--~~--~~~v~R~gGDEF~ill~ 90 (179)
T 3tvk_A 33 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT--RD--YETVYRYGGEEFIIIVK 90 (179)
T ss_dssp EEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHTS--CT--TSCEEECSSSEEEEEEE
T ss_pred CEEEEEEECCCCcHHHhccCchhHHHHHHHHHHHhHhcC--Cc--ccEEEEccCCEEEEEcC
Confidence 589999999999988666 33322233555555555555 21 22345688999998763
No 32
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=64.99 E-value=22 Score=28.04 Aligned_cols=58 Identities=7% Similarity=-0.001 Sum_probs=38.6
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
...++++.||.+|..+.+. +....=.+|..+-..+.+.+ .. .....++-||.++++..
T Consensus 38 ~~~~l~~i~id~f~~in~~~G~~~gd~~L~~ia~~L~~~~--~~--~~~~~R~~~d~F~ill~ 96 (177)
T 3ign_A 38 QATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNI--RQ--SDSAGRYGGEEFGIILP 96 (177)
T ss_dssp CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTS--CT--TSEEEECSSSEEEEEEE
T ss_pred CceEEEEEEchhhHHHHHhhChHHHHHHHHHHHHHHHHhC--CC--CCEEEEecCCeEEEEeC
Confidence 3689999999999998777 55555445555555555544 21 23345688999988753
No 33
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=64.49 E-value=58 Score=29.98 Aligned_cols=63 Identities=6% Similarity=-0.012 Sum_probs=40.8
Q ss_pred eCcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 63 YDSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 63 ~~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
....++++.||.+|..+-+. +....=.+|..+-..+.+.+.....++....++-||.+.++..
T Consensus 46 ~~~~~l~~idid~fk~iNd~~G~~~gD~lL~~va~~L~~~~~~~~~~~~~v~R~ggdeF~ill~ 109 (430)
T 3pjx_A 46 ASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKYPETQNLVTRIRGGEFAVLAP 109 (430)
T ss_dssp CSCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTSGGGTTCEEEEETTEEEEEEE
T ss_pred cCceEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCcCceEEEecCceEEEEeC
Confidence 34678999999999998777 5555555566666666666622100012244588999988753
No 34
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=59.89 E-value=59 Score=25.27 Aligned_cols=57 Identities=7% Similarity=-0.024 Sum_probs=39.7
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEee
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAAC 124 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~ 124 (306)
...++++.||.+|..+-+. +....=.+|..+-..+...+. + +....++-||.++++.
T Consensus 43 ~~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~-~---~~~~~R~~~d~F~ill 100 (177)
T 3hva_A 43 KPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFG-E---EADLARFGDSIFAALF 100 (177)
T ss_dssp CCEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-G---GCEEEECSSSEEEEEE
T ss_pred CCeEEEEEeCCCHHHHHHHhCchhHHHHHHHHHHHHHHhCC-C---CceEEEecCCeEEEEe
Confidence 3689999999999998777 444444556666666666662 2 2234567899998875
No 35
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV}
Probab=56.50 E-value=63 Score=24.91 Aligned_cols=56 Identities=9% Similarity=0.020 Sum_probs=37.1
Q ss_pred cEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEee
Q psy16155 65 SVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAAC 124 (306)
Q Consensus 65 ~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~ 124 (306)
..++++.||.+|..+-+. +....=.+|..+-..+.+.+ . ++....++-||.++++.
T Consensus 42 ~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~--~--~~~~~~R~~~deF~il~ 98 (167)
T 3qyy_A 42 PFVLFVLDMDNLKPINDRFGHLAGDRVLVRLVESAYGWL--G--AQDWIGRWGGDEFLIGV 98 (167)
T ss_dssp CCEEEEEEESSHHHHHHHHCHHHHHHHHHHHHHHHTTTC--C--TTCEEEEEETTEEEEEE
T ss_pred cEEEEEEechhhhHHHhhcCcHHHHHHHHHHHHHHHHhc--C--CCCEEEeecCceEEEEc
Confidence 588999999999998777 55544344444444444443 1 13345568899998876
No 36
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=54.71 E-value=24 Score=28.04 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=41.5
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEee
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAAC 124 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~ 124 (306)
...++++.||.+|..+.+. +....=.+|..+-..+.+.+ .. +....++-||.++++.
T Consensus 35 ~~~~l~~idid~f~~in~~~G~~~gd~lL~~ia~~L~~~~--~~--~~~~~R~~~d~F~il~ 92 (178)
T 3mtk_A 35 IDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIA--GE--GNKAFKIGFDRFAIIC 92 (178)
T ss_dssp TTEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHH--CS--SSEEEEEETTEEEEEE
T ss_pred CceEEEEEEhhHhhHHHHHhChHHHHHHHHHHHHHHHHhc--CC--CCEEEEecCCEEEEEe
Confidence 4688999999999999777 66555566666666677766 21 3334568899998875
No 37
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=50.84 E-value=1.2e+02 Score=26.56 Aligned_cols=59 Identities=8% Similarity=0.048 Sum_probs=34.7
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
...++++.||.+|..+-+. +....=.+|..+-..+.+.+ ... .....++.||.++++..
T Consensus 201 ~~~~l~~idid~fk~ind~~G~~~gD~~L~~va~~l~~~~--~~~-~~~~~R~ggdeF~ill~ 260 (358)
T 3bre_A 201 SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC--SRS-SDLAARYGGEEFAMVLP 260 (358)
T ss_dssp CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTC--CST-TCEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHhc--CCc-CcEEEEecCCeEEEEeC
Confidence 3678999999999877554 43333233444433333332 112 33445688999888753
No 38
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=41.92 E-value=29 Score=27.05 Aligned_cols=58 Identities=10% Similarity=0.134 Sum_probs=41.1
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
...++++.||.+|..+.+. +....=.+|..+-..+.+.+ .. +....++-||.++++..
T Consensus 29 ~~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~--~~--~~~~~R~~~d~F~ill~ 87 (171)
T 3icl_A 29 NPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAV--RD--GDTVARIGGDKFTILLN 87 (171)
T ss_dssp SCCEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHS--CT--TCEEEEETTTEEEEEES
T ss_pred CcEEEEEEEChHhhHHHHHhChHHHHHHHHHHHHHHHHhc--CC--CCEEEEecCCEEEEEec
Confidence 3578999999999999877 66555556666666666666 21 33455688999988753
No 39
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa}
Probab=33.59 E-value=35 Score=26.99 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=38.6
Q ss_pred cEEEEEEec---CCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 65 SVSVMFATL---VESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 65 ~vtvlF~DI---~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
..++++.|| .+|..+.+. +....=.+|..+-..+.+.+ ... -+. ++-||.++++..
T Consensus 27 ~~~l~~i~i~~id~f~~in~~~G~~~gD~~L~~ia~~L~~~~--~~~-~v~--R~~~deF~ill~ 86 (176)
T 3hvw_A 27 ALTVIAADLLPLALLNTIIRTLGYPFSNDLMLEARDRIRAEL--PDF-TLY--KISPTRFGLLLP 86 (176)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC--TTS-CEE--EEETTEEEEEEE
T ss_pred CceEEEEEecCHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHC--CCC-eEE--EecCCEEEEEeC
Confidence 578899999 888887666 55555556666666666666 212 343 488999988864
No 40
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=24.35 E-value=2.5e+02 Score=25.52 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=38.8
Q ss_pred CcEEEEEEecCCcCcCCCC-ChHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeEeCcEEEEeec
Q psy16155 64 DSVSVMFATLVESHDTAPA-STLVSLEILNQIICDFDKILFVPKASRVEKIKVAGWTYLAACG 125 (306)
Q Consensus 64 ~~vtvlF~DI~gft~l~~~-~~~~~v~~Ln~~~~~~d~~i~~~~~~~~~~ik~~GD~~ma~~G 125 (306)
...++++.||-+|..+-+. +...-=.+|..+-..+.+.+ .. .....++-||.++++..
T Consensus 318 ~~~~l~~idid~fk~iNd~~Gh~~gD~~L~~~a~~l~~~~--~~--~d~~~R~ggdeF~il~~ 376 (459)
T 1w25_A 318 DPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV--RA--IDLPCRYGGEEFVVIMP 376 (459)
T ss_dssp CCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTS--CT--TSEEEECSSSEEEEEET
T ss_pred CcEEEEEEEchhhchhhhccChhhHHHHHHHHHHHHHHhC--CC--cCEEEEEcCceEEEEeC
Confidence 3688999999999998777 44433344555555555555 21 33455688999988853
Done!