Query psy16156
Match_columns 260
No_of_seqs 131 out of 1196
Neff 10.3
Searched_HMMs 46136
Date Fri Aug 16 22:14:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16156.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16156hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 2.8E-34 6.1E-39 236.8 17.9 241 1-260 38-292 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 1.7E-33 3.7E-38 230.0 14.3 231 1-260 34-264 (276)
3 PLN02965 Probable pheophorbida 100.0 3.5E-33 7.7E-38 225.6 15.5 232 1-260 12-251 (255)
4 PRK03592 haloalkane dehalogena 100.0 7E-33 1.5E-37 228.6 15.8 248 1-260 36-287 (295)
5 PLN02679 hydrolase, alpha/beta 100.0 2.5E-32 5.5E-37 230.7 16.4 246 1-260 97-355 (360)
6 PRK10349 carboxylesterase BioH 100.0 9.8E-32 2.1E-36 217.3 15.5 224 1-259 22-253 (256)
7 PRK00870 haloalkane dehalogena 100.0 1.4E-31 3.1E-36 221.4 16.3 235 1-260 55-299 (302)
8 KOG1454|consensus 100.0 3.3E-31 7.1E-36 219.0 17.5 248 1-260 67-322 (326)
9 PRK03204 haloalkane dehalogena 100.0 2.6E-31 5.7E-36 218.0 15.4 237 1-260 43-286 (286)
10 KOG4178|consensus 100.0 2.1E-31 4.6E-36 212.4 13.2 238 2-260 54-318 (322)
11 PLN02578 hydrolase 100.0 7.2E-31 1.6E-35 221.5 16.3 242 1-260 95-353 (354)
12 PRK11126 2-succinyl-6-hydroxy- 100.0 1.9E-30 4.1E-35 207.9 17.8 226 1-260 11-240 (242)
13 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.2E-30 2.5E-35 213.8 15.7 235 1-260 39-281 (282)
14 PRK06489 hypothetical protein; 100.0 1.3E-29 2.8E-34 214.4 21.2 233 13-260 100-355 (360)
15 PRK10673 acyl-CoA esterase; Pr 100.0 3.3E-30 7.1E-35 208.1 16.7 228 1-260 25-253 (255)
16 PLN03084 alpha/beta hydrolase 100.0 3.7E-30 7.9E-35 217.3 17.5 238 1-260 136-382 (383)
17 PRK07581 hypothetical protein; 100.0 3.9E-29 8.4E-34 210.1 20.3 245 4-260 53-334 (339)
18 PRK08775 homoserine O-acetyltr 100.0 4.1E-30 8.9E-35 216.2 13.9 85 7-95 84-173 (343)
19 TIGR03056 bchO_mg_che_rel puta 100.0 1.5E-29 3.1E-34 206.6 14.4 237 1-260 37-278 (278)
20 PLN03087 BODYGUARD 1 domain co 100.0 7.1E-29 1.5E-33 213.5 19.1 94 1-95 210-309 (481)
21 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.3E-28 5.1E-33 195.5 19.4 227 1-260 22-251 (251)
22 TIGR03611 RutD pyrimidine util 100.0 6.1E-29 1.3E-33 200.1 16.0 232 1-260 22-256 (257)
23 PF12697 Abhydrolase_6: Alpha/ 100.0 3.8E-29 8.2E-34 196.9 13.7 219 1-254 7-228 (228)
24 TIGR01738 bioH putative pimelo 100.0 1.1E-28 2.5E-33 196.7 15.9 228 1-259 13-245 (245)
25 TIGR03695 menH_SHCHC 2-succiny 100.0 8.7E-28 1.9E-32 191.8 17.3 235 1-260 10-251 (251)
26 TIGR01392 homoserO_Ac_trn homo 100.0 5.2E-28 1.1E-32 204.1 16.8 90 6-95 56-162 (351)
27 PLN02385 hydrolase; alpha/beta 100.0 4.1E-28 8.8E-33 204.6 16.0 233 1-260 96-343 (349)
28 KOG4409|consensus 100.0 6E-27 1.3E-31 187.6 18.3 94 3-96 101-196 (365)
29 PRK00175 metX homoserine O-ace 100.0 1.5E-27 3.3E-32 202.9 15.3 89 7-95 76-182 (379)
30 PLN02211 methyl indole-3-aceta 100.0 1.5E-27 3.2E-32 194.3 13.9 231 1-259 27-267 (273)
31 TIGR01250 pro_imino_pep_2 prol 100.0 4.4E-27 9.6E-32 192.1 16.7 240 5-260 39-288 (288)
32 PHA02857 monoglyceride lipase; 99.9 1.2E-26 2.6E-31 189.6 16.1 229 1-260 34-271 (276)
33 PLN02894 hydrolase, alpha/beta 99.9 6.5E-27 1.4E-31 200.0 15.1 94 1-96 114-212 (402)
34 PRK14875 acetoin dehydrogenase 99.9 3.9E-25 8.4E-30 188.0 20.7 224 1-260 140-369 (371)
35 PLN02980 2-oxoglutarate decarb 99.9 5.3E-26 1.1E-30 221.1 17.3 94 1-94 1380-1479(1655)
36 PLN02298 hydrolase, alpha/beta 99.9 9.5E-26 2.1E-30 188.9 13.7 225 7-259 75-314 (330)
37 PRK10749 lysophospholipase L2; 99.9 6.9E-25 1.5E-29 183.5 16.5 94 2-95 64-166 (330)
38 TIGR01249 pro_imino_pep_1 prol 99.9 9.7E-24 2.1E-28 174.9 19.3 86 10-95 44-130 (306)
39 KOG2382|consensus 99.9 3.3E-24 7.2E-29 171.4 14.0 233 3-260 63-311 (315)
40 PRK05855 short chain dehydroge 99.9 2.6E-24 5.6E-29 193.2 14.2 92 1-92 34-128 (582)
41 PF00561 Abhydrolase_1: alpha/ 99.9 5.2E-24 1.1E-28 168.7 11.2 215 19-256 1-229 (230)
42 PLN02652 hydrolase; alpha/beta 99.9 5.4E-23 1.2E-27 174.8 17.9 229 1-260 145-385 (395)
43 KOG2564|consensus 99.9 2E-23 4.3E-28 161.9 11.0 229 3-259 85-324 (343)
44 KOG2984|consensus 99.9 2.7E-23 5.8E-28 153.9 10.3 213 4-260 55-274 (277)
45 PRK06765 homoserine O-acetyltr 99.9 2.3E-22 5E-27 170.3 17.3 90 6-95 83-196 (389)
46 PLN02511 hydrolase 99.9 9.8E-23 2.1E-27 173.6 11.3 84 9-94 119-209 (388)
47 COG2267 PldB Lysophospholipase 99.9 2.4E-21 5.2E-26 158.8 15.6 94 2-95 44-142 (298)
48 TIGR03100 hydr1_PEP hydrolase, 99.9 4E-21 8.6E-26 156.7 16.1 216 5-260 43-273 (274)
49 KOG1455|consensus 99.9 2.5E-21 5.4E-26 152.7 10.8 229 4-259 67-309 (313)
50 TIGR01607 PST-A Plasmodium sub 99.8 2.5E-20 5.4E-25 155.8 14.6 86 9-94 64-184 (332)
51 PRK05077 frsA fermentation/res 99.8 1.5E-19 3.2E-24 154.9 16.3 198 6-260 209-410 (414)
52 COG1647 Esterase/lipase [Gener 99.8 1.6E-18 3.4E-23 130.7 14.4 213 1-260 24-242 (243)
53 PRK10985 putative hydrolase; P 99.8 1.1E-18 2.4E-23 145.7 13.8 87 8-95 76-168 (324)
54 TIGR01836 PHA_synth_III_C poly 99.8 3.2E-19 7E-24 150.5 10.4 84 7-95 82-171 (350)
55 COG0596 MhpC Predicted hydrola 99.8 4.3E-18 9.3E-23 136.2 14.7 91 1-95 30-123 (282)
56 TIGR01838 PHA_synth_I poly(R)- 99.8 3.6E-18 7.8E-23 148.9 12.1 86 10-95 211-302 (532)
57 PRK11071 esterase YqiA; Provis 99.7 6.6E-17 1.4E-21 124.5 13.7 78 1-94 10-92 (190)
58 COG3208 GrsT Predicted thioest 99.7 2.8E-16 6.1E-21 121.1 11.9 207 3-259 18-233 (244)
59 TIGR03101 hydr2_PEP hydrolase, 99.7 7.7E-17 1.7E-21 129.6 7.4 88 5-94 42-133 (266)
60 PLN02872 triacylglycerol lipas 99.7 1.2E-15 2.5E-20 129.6 13.8 94 2-96 84-198 (395)
61 PRK13604 luxD acyl transferase 99.6 3.5E-15 7.6E-20 120.9 13.7 87 4-94 49-140 (307)
62 PRK10566 esterase; Provisional 99.6 3E-15 6.6E-20 120.4 12.6 90 2-91 37-138 (249)
63 PF03096 Ndr: Ndr family; Int 99.6 7.9E-16 1.7E-20 122.3 8.1 226 12-260 49-277 (283)
64 KOG2931|consensus 99.6 1.9E-14 4E-19 113.2 15.2 84 12-95 72-157 (326)
65 PRK07868 acyl-CoA synthetase; 99.6 8.1E-15 1.8E-19 138.8 11.9 91 1-94 76-176 (994)
66 TIGR03230 lipo_lipase lipoprot 99.6 2.8E-15 6.1E-20 127.5 7.4 95 1-97 50-156 (442)
67 COG2021 MET2 Homoserine acetyl 99.6 1.8E-13 4E-18 111.6 16.2 90 6-95 76-182 (368)
68 PF06342 DUF1057: Alpha/beta h 99.5 9.9E-13 2.1E-17 103.7 16.8 94 2-98 45-140 (297)
69 PF00326 Peptidase_S9: Prolyl 99.5 5.8E-13 1.3E-17 104.7 12.3 87 8-94 3-98 (213)
70 PF00975 Thioesterase: Thioest 99.5 1.7E-12 3.6E-17 103.1 14.5 90 3-96 11-105 (229)
71 PF12695 Abhydrolase_5: Alpha/ 99.5 2E-13 4.3E-18 100.4 8.5 85 1-93 8-93 (145)
72 cd00707 Pancreat_lipase_like P 99.4 1.3E-13 2.8E-18 112.2 5.4 95 1-97 45-149 (275)
73 TIGR02821 fghA_ester_D S-formy 99.4 2.6E-11 5.7E-16 99.0 13.9 93 2-94 52-172 (275)
74 PLN02442 S-formylglutathione h 99.3 2.1E-11 4.5E-16 99.9 12.5 82 13-94 71-177 (283)
75 KOG2565|consensus 99.3 6.6E-11 1.4E-15 96.2 13.1 91 1-92 161-261 (469)
76 TIGR03502 lipase_Pla1_cef extr 99.3 7.3E-12 1.6E-16 113.1 8.2 82 1-82 458-577 (792)
77 PLN02733 phosphatidylcholine-s 99.3 3.9E-12 8.4E-17 109.0 5.8 91 4-94 106-200 (440)
78 PRK10252 entF enterobactin syn 99.3 5.2E-11 1.1E-15 116.6 13.3 91 1-95 1077-1171(1296)
79 KOG1552|consensus 99.3 1.7E-11 3.7E-16 95.5 7.7 73 18-94 88-162 (258)
80 PRK11460 putative hydrolase; P 99.2 1.1E-10 2.5E-15 92.7 10.1 91 1-91 25-134 (232)
81 TIGR01839 PHA_synth_II poly(R) 99.2 1.8E-10 3.9E-15 100.3 11.9 79 11-94 239-327 (560)
82 KOG4391|consensus 99.2 3.4E-11 7.3E-16 91.0 4.4 76 18-95 106-184 (300)
83 PLN00021 chlorophyllase 99.2 4.5E-11 9.7E-16 98.8 5.4 92 1-94 61-165 (313)
84 COG0429 Predicted hydrolase of 99.1 6.9E-10 1.5E-14 89.6 11.7 80 11-92 96-182 (345)
85 KOG4667|consensus 99.1 1.9E-09 4E-14 81.6 12.0 78 10-91 53-135 (269)
86 TIGR00976 /NonD putative hydro 99.1 1.3E-10 2.8E-15 103.9 4.6 77 16-95 51-132 (550)
87 PRK10162 acetyl esterase; Prov 99.0 1.2E-08 2.6E-13 85.1 14.5 90 3-94 95-194 (318)
88 TIGR01849 PHB_depoly_PhaZ poly 99.0 3.7E-09 8.1E-14 89.5 9.7 83 10-95 121-208 (406)
89 smart00824 PKS_TE Thioesterase 98.9 3.7E-09 8E-14 82.3 8.0 88 4-95 11-102 (212)
90 TIGR01840 esterase_phb esteras 98.9 2.6E-09 5.6E-14 83.9 6.5 79 17-95 42-130 (212)
91 PRK05371 x-prolyl-dipeptidyl a 98.9 5.2E-08 1.1E-12 89.7 14.1 76 16-94 277-372 (767)
92 COG1506 DAP2 Dipeptidyl aminop 98.9 9.3E-09 2E-13 93.1 8.7 84 7-92 411-504 (620)
93 PF06500 DUF1100: Alpha/beta h 98.9 2.5E-08 5.5E-13 83.9 10.5 87 7-95 206-296 (411)
94 PF12146 Hydrolase_4: Putative 98.8 2.9E-09 6.2E-14 69.4 3.7 53 2-55 26-79 (79)
95 KOG1838|consensus 98.8 4.1E-08 8.9E-13 82.2 10.5 68 15-84 151-222 (409)
96 COG3319 Thioesterase domains o 98.7 1.9E-08 4.1E-13 80.2 6.0 89 4-96 12-104 (257)
97 COG3243 PhaC Poly(3-hydroxyalk 98.7 1.2E-08 2.6E-13 85.0 4.6 80 15-94 136-216 (445)
98 PF10230 DUF2305: Uncharacteri 98.7 3.9E-08 8.4E-13 79.7 7.1 83 11-93 25-120 (266)
99 PF05448 AXE1: Acetyl xylan es 98.7 5.9E-07 1.3E-11 74.6 14.0 87 5-92 96-206 (320)
100 PF05728 UPF0227: Uncharacteri 98.7 5.4E-07 1.2E-11 68.8 11.6 50 43-95 42-91 (187)
101 COG4757 Predicted alpha/beta h 98.6 9.3E-08 2E-12 73.4 6.7 85 6-92 44-135 (281)
102 COG0400 Predicted esterase [Ge 98.6 4.1E-07 8.9E-12 70.4 10.2 123 43-257 80-204 (207)
103 COG3458 Acetyl esterase (deace 98.6 1.1E-06 2.4E-11 69.1 11.9 89 2-91 93-206 (321)
104 COG2945 Predicted hydrolase of 98.6 9.3E-07 2E-11 66.1 10.8 71 13-84 54-127 (210)
105 PF02230 Abhydrolase_2: Phosph 98.5 1.6E-07 3.4E-12 74.0 5.6 53 43-95 83-140 (216)
106 PF08538 DUF1749: Protein of u 98.5 7.5E-08 1.6E-12 77.9 2.7 78 9-95 53-148 (303)
107 PF07819 PGAP1: PGAP1-like pro 98.5 9.3E-07 2E-11 69.8 8.4 75 18-95 39-123 (225)
108 PF01738 DLH: Dienelactone hyd 98.5 1.3E-06 2.8E-11 68.9 9.1 81 9-90 31-127 (218)
109 PF06821 Ser_hydrolase: Serine 98.4 5.3E-07 1.2E-11 68.0 6.1 70 12-94 20-90 (171)
110 PF08840 BAAT_C: BAAT / Acyl-C 98.4 6.9E-07 1.5E-11 70.0 6.7 50 45-95 4-56 (213)
111 PTZ00472 serine carboxypeptida 98.3 2.1E-06 4.5E-11 75.0 7.4 78 17-94 120-215 (462)
112 PF06057 VirJ: Bacterial virul 98.2 2.7E-06 5.8E-11 64.2 6.0 75 11-92 21-104 (192)
113 PF06028 DUF915: Alpha/beta hy 98.2 1.1E-06 2.4E-11 70.3 4.0 94 1-94 20-142 (255)
114 PF02273 Acyl_transf_2: Acyl t 98.2 1.9E-05 4.2E-10 61.5 10.4 196 3-249 41-243 (294)
115 COG3571 Predicted hydrolase of 98.2 1.4E-05 3E-10 58.2 8.3 85 7-92 31-121 (213)
116 PF03583 LIP: Secretory lipase 98.1 2.6E-05 5.6E-10 64.1 10.4 71 11-81 19-92 (290)
117 PF02450 LCAT: Lecithin:choles 98.0 2.2E-06 4.9E-11 73.3 1.9 85 7-95 66-160 (389)
118 PF02129 Peptidase_S15: X-Pro 97.9 1.7E-05 3.7E-10 64.7 5.7 79 14-93 53-134 (272)
119 PF12740 Chlorophyllase2: Chlo 97.9 8E-06 1.7E-10 65.0 3.4 88 6-95 31-131 (259)
120 PF05677 DUF818: Chlamydia CHL 97.8 8.1E-05 1.8E-09 61.0 7.4 71 7-81 162-236 (365)
121 cd00741 Lipase Lipase. Lipase 97.8 2.3E-05 5E-10 58.1 4.0 51 45-95 9-67 (153)
122 PF01764 Lipase_3: Lipase (cla 97.8 5.7E-05 1.2E-09 55.0 6.0 38 45-82 49-86 (140)
123 PF12715 Abhydrolase_7: Abhydr 97.8 3.4E-05 7.4E-10 64.4 5.2 84 11-95 152-260 (390)
124 PRK10115 protease 2; Provision 97.8 0.00092 2E-08 61.6 14.7 80 13-93 469-557 (686)
125 PF01674 Lipase_2: Lipase (cla 97.8 1.9E-05 4.1E-10 61.8 3.3 76 4-81 14-96 (219)
126 KOG1553|consensus 97.7 6.5E-05 1.4E-09 61.4 5.7 73 15-90 265-340 (517)
127 PF00756 Esterase: Putative es 97.7 3.9E-05 8.4E-10 61.7 4.4 50 45-94 97-149 (251)
128 PRK10439 enterobactin/ferric e 97.7 7.2E-05 1.6E-09 64.5 6.0 50 45-94 268-322 (411)
129 PF09752 DUF2048: Uncharacteri 97.7 0.00082 1.8E-08 55.7 11.5 80 13-92 116-207 (348)
130 COG3545 Predicted esterase of 97.6 0.00011 2.5E-09 54.4 5.2 51 43-94 43-93 (181)
131 PF07224 Chlorophyllase: Chlor 97.6 8E-05 1.7E-09 58.7 4.4 87 4-95 58-157 (307)
132 PF00151 Lipase: Lipase; Inte 97.6 7.6E-05 1.6E-09 62.4 4.3 79 17-97 103-189 (331)
133 PLN02517 phosphatidylcholine-s 97.6 0.00011 2.4E-09 64.6 5.2 86 7-94 157-262 (642)
134 COG1075 LipA Predicted acetylt 97.5 8.9E-05 1.9E-09 62.3 4.2 71 21-95 92-164 (336)
135 PF05577 Peptidase_S28: Serine 97.5 0.00037 7.9E-09 60.9 7.8 77 19-95 60-148 (434)
136 PF11187 DUF2974: Protein of u 97.5 0.00012 2.5E-09 57.7 4.1 46 50-96 75-124 (224)
137 COG4814 Uncharacterized protei 97.5 0.00012 2.7E-09 57.3 3.7 93 2-94 55-175 (288)
138 PF05057 DUF676: Putative seri 97.4 0.00012 2.6E-09 57.6 3.2 35 45-79 61-97 (217)
139 PF05990 DUF900: Alpha/beta hy 97.3 0.00044 9.5E-09 55.0 5.6 62 19-80 49-113 (233)
140 COG0412 Dienelactone hydrolase 97.3 0.00029 6.2E-09 56.2 4.5 82 7-89 42-140 (236)
141 PF07859 Abhydrolase_3: alpha/ 97.3 0.00019 4.2E-09 56.0 3.4 71 17-94 28-109 (211)
142 KOG2369|consensus 97.3 0.00033 7.1E-09 59.8 4.7 50 45-94 167-224 (473)
143 KOG3724|consensus 97.3 0.00027 5.9E-09 63.6 3.8 36 60-95 182-220 (973)
144 cd00519 Lipase_3 Lipase (class 97.1 0.00094 2E-08 53.0 5.3 29 53-81 121-149 (229)
145 PF10503 Esterase_phd: Esteras 97.1 0.0006 1.3E-08 53.5 4.0 49 46-94 81-131 (220)
146 KOG4840|consensus 97.1 0.0055 1.2E-07 47.4 8.8 72 18-94 66-143 (299)
147 PRK04940 hypothetical protein; 97.1 0.00074 1.6E-08 50.9 4.1 33 60-95 60-92 (180)
148 KOG1515|consensus 97.1 0.012 2.6E-07 49.2 11.6 85 5-95 108-207 (336)
149 PLN02571 triacylglycerol lipas 97.0 0.0011 2.3E-08 56.5 4.9 36 45-80 209-246 (413)
150 KOG2281|consensus 97.0 0.00083 1.8E-08 59.4 3.9 74 17-90 675-757 (867)
151 PF11339 DUF3141: Protein of u 97.0 0.011 2.4E-07 51.5 10.5 53 42-94 117-174 (581)
152 PLN02454 triacylglycerol lipas 97.0 0.0015 3.2E-08 55.6 5.2 35 46-80 212-248 (414)
153 PF03403 PAF-AH_p_II: Platelet 96.9 0.00023 5.1E-09 60.7 0.2 37 59-96 227-263 (379)
154 PLN00413 triacylglycerol lipas 96.9 0.0019 4.2E-08 55.6 5.4 35 45-79 269-303 (479)
155 KOG4627|consensus 96.9 0.0047 1E-07 47.2 6.6 81 10-94 89-171 (270)
156 KOG2183|consensus 96.8 0.0044 9.6E-08 52.2 6.8 89 4-94 99-201 (492)
157 PLN02162 triacylglycerol lipas 96.8 0.0022 4.7E-08 55.2 5.2 35 45-79 263-297 (475)
158 COG3509 LpqC Poly(3-hydroxybut 96.8 0.0063 1.4E-07 49.2 7.1 90 3-95 78-179 (312)
159 PLN02408 phospholipase A1 96.7 0.0025 5.4E-08 53.5 4.9 37 45-81 183-221 (365)
160 COG2936 Predicted acyl esteras 96.7 0.0035 7.7E-08 55.4 5.8 77 16-94 78-158 (563)
161 COG3150 Predicted esterase [Ge 96.7 0.0046 1E-07 45.6 5.4 66 23-94 25-90 (191)
162 KOG1551|consensus 96.7 0.017 3.7E-07 45.9 8.9 74 18-93 141-228 (371)
163 COG2819 Predicted hydrolase of 96.7 0.0019 4E-08 51.6 3.6 48 47-94 121-171 (264)
164 PLN02934 triacylglycerol lipas 96.6 0.0041 8.8E-08 54.1 5.1 35 45-79 306-340 (515)
165 PF08386 Abhydrolase_4: TAP-li 96.5 0.0089 1.9E-07 41.0 5.9 57 197-259 34-91 (103)
166 PLN02310 triacylglycerol lipas 96.5 0.0046 9.9E-08 52.6 5.0 36 45-80 190-229 (405)
167 COG0627 Predicted esterase [Ge 96.5 0.0024 5.2E-08 52.9 3.2 55 41-95 127-187 (316)
168 PLN02324 triacylglycerol lipas 96.5 0.0046 9.9E-08 52.7 4.9 36 45-80 198-235 (415)
169 COG4188 Predicted dienelactone 96.4 0.0058 1.3E-07 51.0 5.1 81 5-85 84-184 (365)
170 KOG2624|consensus 96.4 0.16 3.4E-06 43.7 13.6 81 15-95 102-199 (403)
171 PLN02753 triacylglycerol lipas 96.4 0.0058 1.3E-07 53.4 5.0 36 45-80 292-332 (531)
172 PLN02802 triacylglycerol lipas 96.4 0.006 1.3E-07 53.1 5.0 35 46-80 314-350 (509)
173 PF06259 Abhydrolase_8: Alpha/ 96.3 0.0058 1.3E-07 46.2 4.1 52 45-96 89-145 (177)
174 PLN03037 lipase class 3 family 96.2 0.0075 1.6E-07 52.6 4.9 36 45-80 299-338 (525)
175 PLN02719 triacylglycerol lipas 96.2 0.008 1.7E-07 52.4 5.0 36 45-80 278-318 (518)
176 PF04301 DUF452: Protein of un 96.2 0.065 1.4E-06 41.8 9.4 36 58-95 55-90 (213)
177 KOG2182|consensus 96.2 0.032 6.8E-07 48.4 8.3 87 7-95 109-207 (514)
178 PF05277 DUF726: Protein of un 96.2 0.007 1.5E-07 50.7 4.2 39 57-95 217-260 (345)
179 PLN02761 lipase class 3 family 96.1 0.0094 2E-07 52.1 4.9 36 45-80 273-314 (527)
180 cd00312 Esterase_lipase Estera 96.1 0.042 9.1E-07 48.8 9.2 77 19-95 126-213 (493)
181 PF00450 Peptidase_S10: Serine 96.1 0.02 4.4E-07 49.5 6.9 78 17-94 84-180 (415)
182 COG4099 Predicted peptidase [G 96.0 0.0094 2E-07 48.2 4.0 48 47-94 253-303 (387)
183 KOG3101|consensus 96.0 0.00079 1.7E-08 51.5 -1.8 55 41-95 117-176 (283)
184 PLN02847 triacylglycerol lipas 95.9 0.015 3.3E-07 51.6 5.3 28 53-80 244-271 (633)
185 PF01083 Cutinase: Cutinase; 95.9 0.0097 2.1E-07 45.3 3.7 51 44-94 65-121 (179)
186 COG4782 Uncharacterized protei 95.8 0.018 4E-07 47.9 5.1 63 18-80 146-211 (377)
187 PF10142 PhoPQ_related: PhoPQ- 95.8 0.15 3.3E-06 43.2 10.6 43 48-91 157-202 (367)
188 KOG3253|consensus 95.7 0.016 3.4E-07 51.3 4.6 78 7-92 197-283 (784)
189 PF11288 DUF3089: Protein of u 95.6 0.032 7E-07 43.1 5.5 39 43-81 77-116 (207)
190 KOG4569|consensus 95.5 0.027 5.9E-07 47.4 5.0 37 44-80 155-191 (336)
191 KOG2551|consensus 95.4 0.037 8E-07 42.9 5.2 60 192-259 158-217 (230)
192 PF12048 DUF3530: Protein of u 95.3 0.029 6.3E-07 46.7 4.8 47 49-95 182-229 (310)
193 KOG4372|consensus 95.3 0.011 2.4E-07 49.9 2.0 73 4-76 93-166 (405)
194 COG2382 Fes Enterochelin ester 95.1 0.011 2.3E-07 48.0 1.5 34 61-94 178-211 (299)
195 PLN02213 sinapoylglucose-malat 94.9 0.11 2.3E-06 43.6 7.1 74 19-93 2-94 (319)
196 KOG3975|consensus 94.9 0.17 3.7E-06 40.1 7.4 80 12-91 53-143 (301)
197 COG2272 PnbA Carboxylesterase 94.8 0.21 4.5E-06 43.5 8.4 52 45-96 163-218 (491)
198 PF07082 DUF1350: Protein of u 94.8 0.069 1.5E-06 42.4 5.1 79 6-95 34-125 (250)
199 COG0657 Aes Esterase/lipase [L 94.6 0.12 2.7E-06 42.9 6.6 73 17-94 109-190 (312)
200 PF03959 FSH1: Serine hydrolas 94.3 0.041 9E-07 43.1 3.1 38 43-81 86-123 (212)
201 PLN02633 palmitoyl protein thi 94.3 0.053 1.2E-06 44.5 3.6 36 60-95 94-131 (314)
202 KOG2112|consensus 94.0 0.15 3.4E-06 39.1 5.5 87 3-92 14-125 (206)
203 PLN02606 palmitoyl-protein thi 93.7 0.072 1.6E-06 43.6 3.4 36 60-95 95-132 (306)
204 KOG2100|consensus 93.7 0.14 2.9E-06 48.0 5.6 89 5-94 546-643 (755)
205 COG3946 VirJ Type IV secretory 93.6 0.14 3E-06 43.4 4.9 65 11-82 279-348 (456)
206 KOG3847|consensus 93.2 0.02 4.3E-07 46.7 -0.6 42 53-95 234-275 (399)
207 PF11144 DUF2920: Protein of u 93.1 0.11 2.4E-06 44.3 3.6 56 40-95 157-219 (403)
208 KOG2029|consensus 92.3 0.25 5.5E-06 43.9 4.9 16 60-75 526-541 (697)
209 PLN03016 sinapoylglucose-malat 91.7 0.45 9.8E-06 41.6 5.8 77 17-94 114-209 (433)
210 PLN02209 serine carboxypeptida 90.7 0.7 1.5E-05 40.4 6.0 78 17-94 116-211 (437)
211 PRK10279 hypothetical protein; 90.5 0.42 9.2E-06 39.5 4.3 41 47-88 21-61 (300)
212 KOG3043|consensus 90.4 0.75 1.6E-05 36.0 5.2 52 192-244 159-211 (242)
213 COG5153 CVT17 Putative lipase 89.7 0.56 1.2E-05 38.0 4.2 28 55-82 271-298 (425)
214 KOG4540|consensus 89.7 0.56 1.2E-05 38.0 4.2 28 55-82 271-298 (425)
215 PF08237 PE-PPE: PE-PPE domain 89.4 2.6 5.6E-05 33.3 7.8 39 42-80 28-68 (225)
216 COG4947 Uncharacterized protei 89.0 0.21 4.5E-06 37.3 1.2 36 59-94 100-135 (227)
217 KOG3967|consensus 89.0 0.28 6.2E-06 37.9 2.0 79 16-94 142-226 (297)
218 PF00698 Acyl_transf_1: Acyl t 88.4 0.38 8.2E-06 40.2 2.6 30 50-79 74-103 (318)
219 COG1073 Hydrolases of the alph 88.3 1.5 3.2E-05 35.5 6.0 65 191-259 225-294 (299)
220 PF02089 Palm_thioest: Palmito 88.2 0.65 1.4E-05 37.8 3.7 36 60-95 80-116 (279)
221 KOG2541|consensus 88.1 1.2 2.6E-05 35.8 5.0 80 8-95 44-128 (296)
222 smart00827 PKS_AT Acyl transfe 87.9 0.66 1.4E-05 38.2 3.7 31 50-80 72-102 (298)
223 PTZ00472 serine carboxypeptida 87.5 0.51 1.1E-05 41.7 2.9 63 197-260 364-457 (462)
224 COG1770 PtrB Protease II [Amin 87.1 0.9 2E-05 41.1 4.2 50 42-91 507-558 (682)
225 TIGR03131 malonate_mdcH malona 86.9 0.82 1.8E-05 37.7 3.7 31 50-80 66-96 (295)
226 PF05705 DUF829: Eukaryotic pr 86.4 1.3 2.9E-05 35.2 4.6 64 194-259 175-240 (240)
227 COG1752 RssA Predicted esteras 86.3 0.97 2.1E-05 37.6 3.9 33 51-83 30-62 (306)
228 cd07225 Pat_PNPLA6_PNPLA7 Pata 86.2 1 2.3E-05 37.4 4.0 64 6-82 2-65 (306)
229 PF07519 Tannase: Tannase and 86.2 0.76 1.7E-05 40.7 3.3 83 11-94 52-149 (474)
230 TIGR00128 fabD malonyl CoA-acy 86.2 0.87 1.9E-05 37.3 3.5 32 50-81 72-104 (290)
231 PF10340 DUF2424: Protein of u 85.6 3.3 7.1E-05 35.3 6.6 73 19-95 155-235 (374)
232 COG2939 Carboxypeptidase C (ca 85.3 1.1 2.5E-05 39.2 3.8 75 19-93 147-234 (498)
233 cd07230 Pat_TGL4-5_like Triacy 84.9 1.3 2.8E-05 38.6 4.1 43 47-90 89-131 (421)
234 cd01714 ETF_beta The electron 84.8 2.9 6.3E-05 32.4 5.6 52 20-81 79-134 (202)
235 cd07198 Patatin Patatin-like p 84.5 1.5 3.3E-05 33.0 3.9 37 47-84 14-50 (172)
236 PF00135 COesterase: Carboxyle 83.7 2.2 4.8E-05 38.2 5.2 55 40-94 183-244 (535)
237 cd07227 Pat_Fungal_NTE1 Fungal 83.7 1.7 3.6E-05 35.4 4.0 34 47-81 26-59 (269)
238 cd07229 Pat_TGL3_like Triacylg 82.9 1.9 4.1E-05 37.1 4.1 43 47-90 99-141 (391)
239 TIGR02816 pfaB_fam PfaB family 82.5 1.5 3.2E-05 39.4 3.5 32 50-81 254-286 (538)
240 PF03959 FSH1: Serine hydrolas 82.4 2.7 5.9E-05 32.8 4.6 50 194-248 158-207 (212)
241 cd07207 Pat_ExoU_VipD_like Exo 82.4 2 4.4E-05 32.8 3.9 42 47-89 15-57 (194)
242 PF00450 Peptidase_S10: Serine 81.8 0.78 1.7E-05 39.7 1.5 70 188-260 322-414 (415)
243 cd07231 Pat_SDP1-like Sugar-De 81.5 2.3 5.1E-05 35.3 4.0 43 46-89 83-125 (323)
244 cd07232 Pat_PLPL Patain-like p 80.9 2.4 5.1E-05 36.8 4.1 44 46-90 82-125 (407)
245 cd07210 Pat_hypo_W_succinogene 80.9 2.8 6E-05 33.1 4.2 35 47-82 16-50 (221)
246 cd07209 Pat_hypo_Ecoli_Z1214_l 80.4 2.9 6.2E-05 32.8 4.1 34 48-82 15-48 (215)
247 KOG1282|consensus 79.4 6.8 0.00015 34.5 6.4 64 196-260 362-446 (454)
248 cd07222 Pat_PNPLA4 Patatin-lik 78.1 3.6 7.8E-05 33.0 4.1 40 47-88 15-58 (246)
249 KOG1283|consensus 77.7 5.5 0.00012 33.1 4.9 75 20-94 73-165 (414)
250 cd07228 Pat_NTE_like_bacteria 77.2 4.6 9.9E-05 30.4 4.3 37 47-84 16-52 (175)
251 PF05576 Peptidase_S37: PS-10 76.6 0.71 1.5E-05 39.5 -0.3 73 20-92 90-166 (448)
252 cd07212 Pat_PNPLA9 Patatin-lik 75.4 4.7 0.0001 33.6 4.2 34 48-81 16-53 (312)
253 KOG3043|consensus 74.6 1.5 3.2E-05 34.4 0.9 81 10-91 58-150 (242)
254 KOG1516|consensus 74.0 10 0.00022 34.3 6.4 56 40-95 170-232 (545)
255 cd07204 Pat_PNPLA_like Patatin 73.1 7.2 0.00016 31.2 4.6 41 47-88 15-60 (243)
256 cd07224 Pat_like Patatin-like 72.9 7 0.00015 31.1 4.5 36 47-83 15-52 (233)
257 COG0412 Dienelactone hydrolase 72.3 12 0.00025 29.9 5.6 52 193-246 154-206 (236)
258 cd07218 Pat_iPLA2 Calcium-inde 72.1 7.2 0.00016 31.3 4.4 41 47-87 16-58 (245)
259 PF02590 SPOUT_MTase: Predicte 71.5 13 0.00028 27.5 5.3 53 8-70 57-109 (155)
260 KOG2237|consensus 71.0 8 0.00017 35.2 4.7 74 18-91 499-580 (712)
261 PF07859 Abhydrolase_3: alpha/ 70.6 6.4 0.00014 30.3 3.8 42 198-243 167-209 (211)
262 cd07205 Pat_PNPLA6_PNPLA7_NTE1 69.9 8.8 0.00019 28.8 4.3 41 47-88 16-57 (175)
263 KOG2385|consensus 69.5 5.3 0.00011 35.4 3.2 40 56-95 443-487 (633)
264 KOG1202|consensus 69.2 7.8 0.00017 38.2 4.4 70 25-95 2147-2219(2376)
265 cd07208 Pat_hypo_Ecoli_yjju_li 69.0 9.8 0.00021 30.8 4.7 40 47-87 14-54 (266)
266 KOG1282|consensus 68.9 13 0.00027 32.9 5.4 62 19-80 118-188 (454)
267 cd07221 Pat_PNPLA3 Patatin-lik 68.9 9.5 0.00021 30.8 4.4 42 47-89 16-62 (252)
268 PF11713 Peptidase_C80: Peptid 67.7 3.4 7.3E-05 30.7 1.5 49 24-72 59-116 (157)
269 PLN02213 sinapoylglucose-malat 66.2 8.1 0.00018 32.3 3.7 61 197-260 233-315 (319)
270 PF09949 DUF2183: Uncharacteri 65.8 8.3 0.00018 26.2 3.0 81 6-89 11-96 (100)
271 cd07206 Pat_TGL3-4-5_SDP1 Tria 65.0 9.9 0.00021 31.5 3.9 38 47-85 85-122 (298)
272 COG1576 Uncharacterized conser 64.0 23 0.0005 26.1 5.2 50 10-70 59-108 (155)
273 TIGR02883 spore_cwlD N-acetylm 60.7 17 0.00037 27.8 4.4 40 20-60 1-45 (189)
274 PRK00103 rRNA large subunit me 60.3 36 0.00079 25.2 5.8 49 11-70 60-109 (157)
275 PF02129 Peptidase_S15: X-Pro 57.6 30 0.00066 28.0 5.6 47 191-242 222-271 (272)
276 COG4667 Predicted esterase of 57.6 24 0.00052 28.7 4.6 45 47-91 27-71 (292)
277 TIGR03712 acc_sec_asp2 accesso 56.8 11 0.00023 33.4 2.8 39 45-83 340-381 (511)
278 PLN02752 [acyl-carrier protein 56.5 11 0.00025 31.7 3.0 29 52-80 110-144 (343)
279 COG0218 Predicted GTPase [Gene 55.9 18 0.00039 28.0 3.6 15 20-34 71-85 (200)
280 COG2939 Carboxypeptidase C (ca 55.4 13 0.00029 32.8 3.2 28 232-259 461-488 (498)
281 cd07220 Pat_PNPLA2 Patatin-lik 55.3 23 0.00051 28.5 4.4 36 47-83 20-59 (249)
282 PLN02209 serine carboxypeptida 54.0 16 0.00036 32.1 3.6 61 197-260 351-433 (437)
283 PLN03016 sinapoylglucose-malat 53.5 17 0.00038 31.9 3.7 61 197-260 347-429 (433)
284 KOG2214|consensus 53.4 11 0.00024 33.3 2.4 43 47-90 190-232 (543)
285 COG0331 FabD (acyl-carrier-pro 53.1 15 0.00033 30.6 3.1 22 58-79 83-104 (310)
286 cd07217 Pat17_PNPLA8_PNPLA9_li 53.0 12 0.00026 31.7 2.5 19 63-81 44-62 (344)
287 cd07211 Pat_PNPLA8 Patatin-lik 52.7 19 0.00042 29.8 3.7 52 16-79 5-60 (308)
288 TIGR03607 patatin-related prot 52.5 18 0.0004 34.0 3.8 32 48-79 51-85 (739)
289 PRK12467 peptide synthase; Pro 52.4 35 0.00075 39.0 6.4 84 8-95 3708-3795(3956)
290 COG4553 DepA Poly-beta-hydroxy 52.0 48 0.001 27.5 5.6 82 11-95 123-209 (415)
291 PF14253 AbiH: Bacteriophage a 51.7 8.8 0.00019 31.0 1.5 15 58-72 233-247 (270)
292 COG3887 Predicted signaling pr 51.0 16 0.00034 33.2 2.9 46 47-95 327-378 (655)
293 PRK10319 N-acetylmuramoyl-l-al 50.0 33 0.00071 28.3 4.5 41 19-60 56-101 (287)
294 PF12242 Eno-Rase_NADH_b: NAD( 49.9 39 0.00085 21.7 3.8 41 41-81 17-61 (78)
295 TIGR02813 omega_3_PfaA polyket 49.6 17 0.00037 39.4 3.4 29 50-78 664-692 (2582)
296 PF03283 PAE: Pectinacetyleste 48.9 34 0.00073 29.3 4.6 38 59-96 155-196 (361)
297 PF03405 FA_desaturase_2: Fatt 47.2 35 0.00076 28.7 4.3 63 24-88 231-305 (330)
298 COG2830 Uncharacterized protei 47.1 7.6 0.00017 28.9 0.4 34 60-95 57-90 (214)
299 cd01819 Patatin_and_cPLA2 Pata 46.2 34 0.00073 25.2 3.8 31 47-78 14-46 (155)
300 PLN00179 acyl- [acyl-carrier p 44.8 55 0.0012 28.0 5.1 64 24-89 288-363 (390)
301 COG3545 Predicted esterase of 44.3 28 0.00061 26.4 3.0 43 194-243 114-157 (181)
302 cd07213 Pat17_PNPLA8_PNPLA9_li 44.1 20 0.00042 29.5 2.4 19 63-81 37-55 (288)
303 smart00824 PKS_TE Thioesterase 43.7 22 0.00048 26.8 2.6 61 194-258 150-211 (212)
304 PRK04940 hypothetical protein; 43.1 90 0.002 23.8 5.6 50 200-259 127-177 (180)
305 PF00862 Sucrose_synth: Sucros 41.6 48 0.001 29.7 4.4 38 43-80 383-422 (550)
306 PRK06731 flhF flagellar biosyn 41.5 60 0.0013 26.5 4.8 71 10-90 144-218 (270)
307 PRK10431 N-acetylmuramoyl-l-al 41.4 65 0.0014 28.5 5.2 44 20-64 192-240 (445)
308 cd00382 beta_CA Carbonic anhyd 41.4 36 0.00078 23.8 3.1 31 45-75 44-74 (119)
309 TIGR00246 tRNA_RlmH_YbeA rRNA 41.3 96 0.0021 22.9 5.4 48 11-70 59-106 (153)
310 PLN00021 chlorophyllase 41.0 58 0.0013 27.2 4.8 53 195-248 187-246 (313)
311 PF01734 Patatin: Patatin-like 39.0 26 0.00057 26.0 2.3 25 56-80 23-47 (204)
312 PRK15219 carbonic anhydrase; P 37.6 64 0.0014 26.0 4.3 34 45-78 128-161 (245)
313 cd03379 beta_CA_cladeD Carboni 36.6 52 0.0011 23.8 3.4 31 45-75 41-71 (142)
314 PRK11789 N-acetyl-anhydromuran 35.5 43 0.00092 25.7 2.9 27 43-69 132-158 (185)
315 cd01853 Toc34_like Toc34-like 35.5 78 0.0017 25.4 4.6 17 17-33 77-93 (249)
316 PRK14974 cell division protein 34.1 75 0.0016 26.9 4.4 64 17-90 221-286 (336)
317 KOG2382|consensus 33.8 3.4 7.3E-05 34.3 -3.5 65 16-88 117-185 (315)
318 PRK14759 potassium-transportin 33.2 39 0.00084 17.1 1.5 17 69-85 7-29 (29)
319 COG1505 Serine proteases of th 33.2 11 0.00025 34.0 -0.6 78 12-90 444-530 (648)
320 cd01985 ETF The electron trans 32.9 1.4E+02 0.0029 22.5 5.4 39 41-80 74-113 (181)
321 cd00883 beta_CA_cladeA Carboni 32.7 79 0.0017 24.0 4.0 33 46-78 67-99 (182)
322 PF00448 SRP54: SRP54-type pro 32.4 47 0.001 25.6 2.8 64 17-90 82-147 (196)
323 cd00884 beta_CA_cladeB Carboni 32.4 78 0.0017 24.3 3.9 33 46-78 73-105 (190)
324 cd08770 DAP_dppA_3 Peptidase M 32.3 1.1E+02 0.0023 25.0 4.8 55 191-257 141-197 (263)
325 cd07216 Pat17_PNPLA8_PNPLA9_li 32.1 31 0.00068 28.7 1.9 17 63-79 45-61 (309)
326 PF06073 DUF934: Bacterial pro 32.0 1.8E+02 0.0038 20.2 5.6 29 1-30 3-31 (110)
327 PHA02595 tk.4 hypothetical pro 31.9 30 0.00066 25.5 1.6 20 67-86 29-48 (154)
328 PF00484 Pro_CA: Carbonic anhy 31.6 2E+02 0.0044 20.8 6.1 34 45-78 40-73 (153)
329 COG0528 PyrH Uridylate kinase 31.6 1.6E+02 0.0034 23.6 5.4 61 17-81 3-64 (238)
330 COG0657 Aes Esterase/lipase [L 31.5 1.4E+02 0.003 24.7 5.6 45 197-245 245-290 (312)
331 KOG2112|consensus 31.0 63 0.0014 25.2 3.2 47 197-245 144-191 (206)
332 COG0860 AmiC N-acetylmuramoyl- 30.4 1.5E+02 0.0033 23.5 5.4 38 20-58 43-85 (231)
333 PRK10437 carbonic anhydrase; P 30.3 76 0.0016 25.1 3.6 33 46-78 77-109 (220)
334 PF06028 DUF915: Alpha/beta hy 29.7 1.4E+02 0.003 24.2 5.1 57 197-259 184-252 (255)
335 cd07219 Pat_PNPLA1 Patatin-lik 29.5 87 0.0019 27.0 4.0 42 47-89 28-74 (382)
336 PF00070 Pyr_redox: Pyridine n 29.5 56 0.0012 20.6 2.4 31 61-94 1-31 (80)
337 PF12083 DUF3560: Domain of un 29.3 45 0.00097 23.7 2.0 22 47-68 29-50 (126)
338 PF01520 Amidase_3: N-acetylmu 29.1 53 0.0012 24.4 2.6 45 22-68 1-50 (175)
339 cd07199 Pat17_PNPLA8_PNPLA9_li 28.9 88 0.0019 25.1 3.9 18 63-80 37-54 (258)
340 KOG2486|consensus 28.2 1.3E+02 0.0028 24.9 4.5 15 20-34 184-198 (320)
341 COG4188 Predicted dienelactone 28.1 34 0.00075 29.1 1.4 58 191-251 245-303 (365)
342 cd07214 Pat17_isozyme_like Pat 28.0 41 0.00088 28.6 1.9 19 63-81 46-64 (349)
343 cd07215 Pat17_PNPLA8_PNPLA9_li 28.0 43 0.00094 28.1 2.1 17 63-79 43-59 (329)
344 cd08769 DAP_dppA_2 Peptidase M 27.8 1.5E+02 0.0032 24.3 4.9 55 191-257 141-198 (270)
345 cd06143 PAN2_exo DEDDh 3'-5' e 27.4 57 0.0012 24.7 2.3 13 60-72 101-113 (174)
346 cd08663 DAP_dppA_1 Peptidase M 26.7 1.4E+02 0.0031 24.3 4.6 55 191-257 141-198 (266)
347 KOG1578|consensus 26.5 44 0.00095 27.1 1.7 31 48-78 142-172 (276)
348 PLN03019 carbonic anhydrase 26.4 1E+02 0.0022 26.0 3.8 33 46-78 201-233 (330)
349 PRK14194 bifunctional 5,10-met 26.3 1.3E+02 0.0028 25.1 4.4 34 47-80 143-182 (301)
350 PRK10416 signal recognition pa 26.2 1.3E+02 0.0029 25.2 4.6 76 8-90 186-266 (318)
351 COG1092 Predicted SAM-dependen 26.1 1.6E+02 0.0034 25.7 5.0 17 18-34 290-306 (393)
352 PRK03031 rnpA ribonuclease P; 26.1 1.8E+02 0.004 20.4 4.7 45 8-61 75-119 (122)
353 PF03490 Varsurf_PPLC: Variant 26.0 95 0.0021 18.0 2.5 27 41-67 6-32 (51)
354 PF13289 SIR2_2: SIR2-like dom 25.7 1.5E+02 0.0032 20.9 4.3 15 56-70 83-97 (143)
355 cd00281 DAP_dppA Peptidase M55 25.4 1.7E+02 0.0038 23.8 4.9 55 191-257 140-197 (265)
356 TIGR01425 SRP54_euk signal rec 25.3 1.1E+02 0.0024 27.0 4.0 64 17-90 181-246 (429)
357 cd06583 PGRP Peptidoglycan rec 25.3 1.3E+02 0.0027 20.8 3.8 49 20-71 68-117 (126)
358 PLN03006 carbonate dehydratase 24.7 94 0.002 25.8 3.3 32 46-77 158-189 (301)
359 PLN00416 carbonate dehydratase 24.4 1.2E+02 0.0026 24.6 3.8 33 46-78 126-158 (258)
360 PRK07281 methionine aminopepti 24.3 73 0.0016 26.2 2.7 26 45-70 176-202 (286)
361 COG4850 Uncharacterized conser 24.3 1E+02 0.0023 25.9 3.5 47 48-94 266-314 (373)
362 PRK13512 coenzyme A disulfide 24.2 1.2E+02 0.0027 26.5 4.3 44 47-93 136-179 (438)
363 PF12692 Methyltransf_17: S-ad 24.1 1.3E+02 0.0027 22.3 3.5 86 3-91 38-126 (160)
364 cd01088 MetAP2 Methionine Amin 24.1 62 0.0014 26.7 2.3 28 44-71 127-155 (291)
365 TIGR00064 ftsY signal recognit 23.5 2.3E+02 0.0049 23.1 5.4 56 15-80 151-212 (272)
366 TIGR02354 thiF_fam2 thiamine b 23.3 67 0.0015 24.8 2.2 41 51-94 13-54 (200)
367 cd01086 MetAP1 Methionine Amin 23.3 74 0.0016 25.1 2.5 27 47-73 138-165 (238)
368 PF00091 Tubulin: Tubulin/FtsZ 23.3 1.1E+02 0.0023 23.9 3.3 29 49-77 113-141 (216)
369 PF03681 UPF0150: Uncharacteri 22.9 47 0.001 18.7 1.0 14 17-30 12-25 (48)
370 PRK08671 methionine aminopepti 22.8 60 0.0013 26.8 1.9 29 43-71 127-156 (291)
371 cd01715 ETF_alpha The electron 22.6 1.5E+02 0.0032 22.0 3.9 39 41-80 66-105 (168)
372 COG4100 Cystathionine beta-lya 22.6 4.7E+02 0.01 22.1 6.8 74 4-87 151-224 (416)
373 KOG2100|consensus 22.6 2.4E+02 0.0051 27.0 5.9 67 191-259 675-744 (755)
374 PLN00022 electron transfer fla 22.6 3E+02 0.0065 23.6 6.0 41 40-81 99-140 (356)
375 PRK04148 hypothetical protein; 22.5 1.8E+02 0.004 20.9 4.1 43 46-92 4-46 (134)
376 COG0288 CynT Carbonic anhydras 22.5 1E+02 0.0023 24.0 3.1 35 45-79 77-111 (207)
377 KOG2248|consensus 22.4 88 0.0019 27.0 2.8 44 47-92 280-324 (380)
378 PRK03363 fixB putative electro 22.3 2.1E+02 0.0046 24.0 5.0 40 41-80 62-102 (313)
379 PF02044 Bombesin: Bombesin-li 21.9 13 0.00029 15.1 -1.0 6 65-70 6-11 (14)
380 PRK12318 methionine aminopepti 21.8 68 0.0015 26.5 2.0 20 51-70 192-212 (291)
381 PF06289 FlbD: Flagellar prote 21.6 1E+02 0.0023 18.7 2.3 30 230-259 26-55 (60)
382 PF01012 ETF: Electron transfe 21.5 2E+02 0.0043 21.1 4.4 39 41-80 73-112 (164)
383 PRK12726 flagellar biosynthesi 21.3 1.9E+02 0.0042 25.2 4.6 72 9-90 274-349 (407)
384 PF08197 TT_ORF2a: pORF2a trun 21.0 75 0.0016 17.8 1.4 13 20-32 36-48 (49)
385 PRK13506 formate--tetrahydrofo 20.9 1.6E+02 0.0036 26.8 4.2 81 5-88 174-274 (578)
386 PLN02154 carbonic anhydrase 20.7 1.5E+02 0.0033 24.5 3.7 32 47-78 153-184 (290)
387 COG2885 OmpA Outer membrane pr 20.7 1.4E+02 0.0031 22.6 3.5 26 43-68 98-123 (190)
388 KOG2492|consensus 20.6 1.5E+02 0.0032 26.0 3.7 44 26-69 391-434 (552)
389 PRK06193 hypothetical protein; 20.5 1.6E+02 0.0036 22.9 3.8 28 42-69 136-165 (206)
390 PF10081 Abhydrolase_9: Alpha/ 20.1 79 0.0017 26.0 2.0 48 48-95 94-147 (289)
391 PRK14538 putative bifunctional 20.0 2.1E+02 0.0045 27.8 5.0 34 44-79 354-393 (838)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.8e-34 Score=236.76 Aligned_cols=241 Identities=17% Similarity=0.174 Sum_probs=149.0
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCC-----CCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPP-----GMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~-----~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~ 75 (260)
|+.++..|+.+++.|+++|+||++|+||||.|+.... ...|++.++++|+.++++++++++++||||||||+||+
T Consensus 38 ~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~ 117 (294)
T PLN02824 38 FGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGL 117 (294)
T ss_pred CCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHH
Confidence 6788999999999999999999999999999986321 12588999999999999999999999999999999999
Q ss_pred HHHHhCcchhhhHHhhcccCCCCc-c-hhHHHHHHHHHHHHhHh---H-HHhhcCCCCCCCCHHHHHHHHHh-cc-ccCC
Q psy16156 76 HYAAMFPQLMDRLILLDAMNQRKT-K-VEDTLTKVRDILTNQMN---L-EEKLNNRTQPVYTKEQVVSKLKQ-RL-LLNE 147 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~~~~~~-~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 147 (260)
.+|+++|++|+++|++++...... . .......+...+...+. . ..... .. .... ....+.. .+ ....
T Consensus 118 ~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~-~~~~~~~~~~~~~~~ 192 (294)
T PLN02824 118 QAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFK--SV--ATPE-TVKNILCQCYHDDSA 192 (294)
T ss_pred HHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHH--hh--cCHH-HHHHHHHHhccChhh
Confidence 999999999999999996532110 0 00000100011111000 0 00000 00 0011 1111111 11 0112
Q ss_pred CCHHHHHHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhh
Q psy16156 148 ISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYS 227 (260)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~ 227 (260)
++++..+.+....... +. .+. .... ............++++++|||+|+|++|..++. +. .+.+...
T Consensus 193 ~~~~~~~~~~~~~~~~---~~---~~~-~~~~-~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~----~~-~~~~~~~ 259 (294)
T PLN02824 193 VTDELVEAILRPGLEP---GA---VDV-FLDF-ISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPV----EL-GRAYANF 259 (294)
T ss_pred ccHHHHHHHHhccCCc---hH---HHH-HHHH-hccccccchHHHHhhcCCCeEEEEecCCCCCCh----HH-HHHHHhc
Confidence 3333332221111110 00 000 0000 000111122356789999999999999997654 22 2335544
Q ss_pred CCCCcEEEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 228 RHPKFHVEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 228 ~~p~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
. |+.+++.++ +||++++|+|++|++.|.+|++
T Consensus 260 ~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 260 D-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred C-CccceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 3 578899997 6999999999999999999984
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.7e-33 Score=230.04 Aligned_cols=231 Identities=16% Similarity=0.183 Sum_probs=144.4
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|.+++..|+.+++.|+++|+||++|+||||+|+. +. ..|+++++++|+.++++++++++++||||||||+||+.+|.+
T Consensus 34 ~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~-~~-~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 34 IGANLELVFPFIEALDPDLEVIAFDVPGVGGSST-PR-HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHD 111 (276)
T ss_pred CCcchHHHHHHHHHhccCceEEEECCCCCCCCCC-CC-CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHH
Confidence 5678899999999999999999999999999986 33 357899999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhc
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRA 160 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++|++|||++++........ ...... . +......+ .. .... ......... .....++....... .
T Consensus 112 ~p~~v~~lvl~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~---~~-~~~~-~~~~~~~~~--~~~~~~~~~~~~~~-~ 178 (276)
T TIGR02240 112 YPERCKKLILAATAAGAVMVPG-KPKVLM-M---MASPRRYI---QP-SHGI-HIAPDIYGG--AFRRDPELAMAHAS-K 178 (276)
T ss_pred CHHHhhheEEeccCCccccCCC-chhHHH-H---hcCchhhh---cc-cccc-chhhhhccc--eeeccchhhhhhhh-h
Confidence 9999999999997642111010 000000 0 00000000 00 0000 000000000 00011111111100 0
Q ss_pred ceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcCC
Q psy16156 161 VSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSG 240 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g 240 (260)
+... ....+. ... ...... +....++++++|||+|+|++|.+++. +. .+.+.... |+.+++.+++|
T Consensus 179 ~~~~-~~~~~~-----~~~-~~~~~~-~~~~~l~~i~~P~lii~G~~D~~v~~----~~-~~~l~~~~-~~~~~~~i~~g 244 (276)
T TIGR02240 179 VRSG-GKLGYY-----WQL-FAGLGW-TSIHWLHKIQQPTLVLAGDDDPIIPL----IN-MRLLAWRI-PNAELHIIDDG 244 (276)
T ss_pred cccC-CCchHH-----HHH-HHHcCC-chhhHhhcCCCCEEEEEeCCCCcCCH----HH-HHHHHHhC-CCCEEEEEcCC
Confidence 0000 000000 000 000000 12345789999999999999997664 22 23343333 68899899889
Q ss_pred CCCCCCChHHHHHHHHhhhC
Q psy16156 241 HDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 241 H~~~~e~p~~~~~~i~~fl~ 260 (260)
|++++|+|+++++.|.+|++
T Consensus 245 H~~~~e~p~~~~~~i~~fl~ 264 (276)
T TIGR02240 245 HLFLITRAEAVAPIIMKFLA 264 (276)
T ss_pred CchhhccHHHHHHHHHHHHH
Confidence 99999999999999999974
No 3
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=3.5e-33 Score=225.63 Aligned_cols=232 Identities=16% Similarity=0.143 Sum_probs=142.6
Q ss_pred CcccccchHhhhccC-CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC-ceEEEEEeChhHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLL-PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW-TKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L-~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhSmGG~ia~~~a 78 (260)
|..++..|+.+++.| +.+|+|+++|+||||.|+..+ ...|++.++++|+.++++++++ ++++||||||||.||+.+|
T Consensus 12 ~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~-~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a 90 (255)
T PLN02965 12 ASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS-NTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEAL 90 (255)
T ss_pred CCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc-cccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHH
Confidence 456788999999999 567999999999999998632 2357899999999999999988 4999999999999999999
Q ss_pred HhCcchhhhHHhhcccCCCCcc--hhHHHHHHHHHHHHhHhHHHhhcCCCCCCC---CHHHHHHHHHhccccCCCCHHHH
Q psy16156 79 AMFPQLMDRLILLDAMNQRKTK--VEDTLTKVRDILTNQMNLEEKLNNRTQPVY---TKEQVVSKLKQRLLLNEISTESA 153 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
.++|++|+++|++++..+.+.. ...... .............. ........ ...++..... ......+..
T Consensus 91 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 164 (255)
T PLN02965 91 CKFTDKISMAIYVAAAMVKPGSIISPRLKN-VMEGTEKIWDYTFG-EGPDKPPTGIMMKPEFVRHYY----YNQSPLEDY 164 (255)
T ss_pred HhCchheeEEEEEccccCCCCCCccHHHHh-hhhccccceeeeec-cCCCCCcchhhcCHHHHHHHH----hcCCCHHHH
Confidence 9999999999999965321111 111100 00000000000000 00000000 0001111111 111111111
Q ss_pred HHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcE
Q psy16156 154 EILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH 233 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (260)
... ...+.... . . ......+....+.++++||++|+|++|..+++ .. .+.+.... |+++
T Consensus 165 ~~~-~~~~~~~~--~------~------~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~----~~-~~~~~~~~-~~a~ 223 (255)
T PLN02965 165 TLS-SKLLRPAP--V------R------AFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDP----VR-QDVMVENW-PPAQ 223 (255)
T ss_pred HHH-HHhcCCCC--C------c------chhhhhhccchhhcCCCCEEEEEcCCCCCCCH----HH-HHHHHHhC-Ccce
Confidence 111 11111100 0 0 00000111224567999999999999997765 23 33444433 6889
Q ss_pred EEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 234 VEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 234 ~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
++.++ +||++++|+|++|++.|.+|++
T Consensus 224 ~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 224 TYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred EEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 88887 6999999999999999999874
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7e-33 Score=228.55 Aligned_cols=248 Identities=13% Similarity=0.185 Sum_probs=147.5
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+..+...|+.+++.|+++|+||++|+||||.|+... ..|++.++++|+.++++++++++++||||||||.||+.+|.+
T Consensus 36 ~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 113 (295)
T PRK03592 36 NPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPD--IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAAR 113 (295)
T ss_pred CCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHh
Confidence 456788999999999999999999999999998733 258899999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhc
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRA 160 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++|++||++++... +................ +..... ..........+...+........++++....+....
T Consensus 114 ~p~~v~~lil~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
T PRK03592 114 HPDRVRGIAFMEAIVR-PMTWDDFPPAVRELFQA-LRSPGE---GEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPF 188 (295)
T ss_pred ChhheeEEEEECCCCC-CcchhhcchhHHHHHHH-HhCccc---ccccccchhhHHhhcccCcccccCCHHHHHHHHhhc
Confidence 9999999999996431 11111110111111100 000000 000000001111111111101123333332222111
Q ss_pred ceecC-Cce-EEeecccccccccc-CCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEE
Q psy16156 161 VSARD-GGF-VFNFDQRLKNKIYL-VMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV 237 (260)
Q Consensus 161 ~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 237 (260)
..... ... .+.+.......... .....+....+.++++|||+|+|++|..++. . ...+.+.... |+.+++.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~---~-~~~~~~~~~~-~~~~~~~i 263 (295)
T PRK03592 189 PTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTT---G-AIRDWCRSWP-NQLEITVF 263 (295)
T ss_pred CCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCc---H-HHHHHHHHhh-hhcceeec
Confidence 10000 000 00000000000000 0001123345788999999999999997632 1 2233444333 57888888
Q ss_pred c-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 238 D-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 238 ~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+ +||++++|+|+++++.|.+|++
T Consensus 264 ~~~gH~~~~e~p~~v~~~i~~fl~ 287 (295)
T PRK03592 264 GAGLHFAQEDSPEEIGAAIAAWLR 287 (295)
T ss_pred cCcchhhhhcCHHHHHHHHHHHHH
Confidence 7 6999999999999999999974
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.5e-32 Score=230.70 Aligned_cols=246 Identities=15% Similarity=0.157 Sum_probs=146.2
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|..+...|+++++.|+++|+||++|+||||.|++. ....|++.++++++.++++++++++++||||||||.||+.+|..
T Consensus 97 ~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 175 (360)
T PLN02679 97 FGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKP-PGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASE 175 (360)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCC-CCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHh
Confidence 56778899999999999999999999999999873 23468899999999999999999999999999999999999874
Q ss_pred -CcchhhhHHhhcccCCCCcc--hhHHHHH-HHH---HHHHhHhH---HHhhcCCCCCCCCHHHHHHHHHh-ccc-cCCC
Q psy16156 81 -FPQLMDRLILLDAMNQRKTK--VEDTLTK-VRD---ILTNQMNL---EEKLNNRTQPVYTKEQVVSKLKQ-RLL-LNEI 148 (260)
Q Consensus 81 -~p~~v~~lvlid~~~~~~~~--~~~~~~~-~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 148 (260)
+|++|+++|++++....... ....... ... .+..+... ...+. ...... ..+..+.. .+. ...+
T Consensus 176 ~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~ 251 (360)
T PLN02679 176 STRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALF---NRVKQR-DNLKNILLSVYGNKEAV 251 (360)
T ss_pred cChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHH---HHhcCH-HHHHHHHHHhccCcccC
Confidence 79999999999965422110 1111000 000 00000000 00000 000000 11111111 100 1122
Q ss_pred CHHHHHHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhC
Q psy16156 149 STESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSR 228 (260)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~ 228 (260)
+++..+.+....... ... + ........ ....+....+.++++|||+|+|++|..++.........+.+....
T Consensus 252 ~~~~~~~~~~~~~~~--~~~----~-~~~~~~~~-~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i 323 (360)
T PLN02679 252 DDELVEIIRGPADDE--GAL----D-AFVSIVTG-PPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL 323 (360)
T ss_pred CHHHHHHHHhhccCC--ChH----H-HHHHHHhc-CCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC
Confidence 333322211100000 000 0 00000000 011123456789999999999999987654100000112233323
Q ss_pred CCCcEEEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 229 HPKFHVEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 229 ~p~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
|+.++++++ +||++++|+|++|++.|.+||+
T Consensus 324 -p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~ 355 (360)
T PLN02679 324 -PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLA 355 (360)
T ss_pred -CceEEEEcCCCCCCccccCHHHHHHHHHHHHH
Confidence 689999998 5999999999999999999984
No 6
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.98 E-value=9.8e-32 Score=217.32 Aligned_cols=224 Identities=18% Similarity=0.150 Sum_probs=136.8
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|..++..|+.+++.|+++|+|+++|+||||.|+. ++ .+++.++++++.+ +++++++||||||||.||+.+|.+
T Consensus 22 ~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~-~~--~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 22 WGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRG-FG--ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCC-CC--CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHh
Confidence 5788999999999999999999999999999985 22 4677777777653 567999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcc--hh----HHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccc-cCCCCHHHH
Q psy16156 81 FPQLMDRLILLDAMNQRKTK--VE----DTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLL-LNEISTESA 153 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (260)
+|++|+++|++++.+..... .. .....+...+.. ........+..... .........
T Consensus 95 ~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T PRK10349 95 HPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSD----------------DFQRTVERFLALQTMGTETARQDA 158 (256)
T ss_pred ChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHh----------------chHHHHHHHHHHHHccCchHHHHH
Confidence 99999999999864321110 00 011111110000 00011111111000 001001111
Q ss_pred HHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcE
Q psy16156 154 EILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH 233 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (260)
..+.. ......... ....... ...+...+....++++++|||+|+|++|.+.+. .. .+.++... |+++
T Consensus 159 ~~~~~-~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~----~~-~~~~~~~i-~~~~ 226 (256)
T PRK10349 159 RALKK-TVLALPMPE----VDVLNGG-LEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPR----KV-VPMLDKLW-PHSE 226 (256)
T ss_pred HHHHH-HhhccCCCc----HHHHHHH-HHHHHhCccHHHHhhcCCCeEEEecCCCccCCH----HH-HHHHHHhC-CCCe
Confidence 11111 000000000 0000000 001111134456889999999999999987654 22 23444433 6899
Q ss_pred EEEEc-CCCCCCCCChHHHHHHHHhhh
Q psy16156 234 VEMVD-SGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 234 ~~~~~-~gH~~~~e~p~~~~~~i~~fl 259 (260)
++.++ +||++++|+|+.|++.|.+|-
T Consensus 227 ~~~i~~~gH~~~~e~p~~f~~~l~~~~ 253 (256)
T PRK10349 227 SYIFAKAAHAPFISHPAEFCHLLVALK 253 (256)
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHHh
Confidence 99998 599999999999999999883
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=1.4e-31 Score=221.42 Aligned_cols=235 Identities=14% Similarity=0.113 Sum_probs=142.1
Q ss_pred CcccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
|++++..|+.+++.|++ +|+|+++|+||||.|++.+....|++.++++|+.++++++++++++||||||||+||+.+|.
T Consensus 55 ~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 134 (302)
T PRK00870 55 EPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAA 134 (302)
T ss_pred CCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHH
Confidence 56788899999999985 69999999999999986433335889999999999999999999999999999999999999
Q ss_pred hCcchhhhHHhhcccCCCCcc-hhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHH
Q psy16156 80 MFPQLMDRLILLDAMNQRKTK-VEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFT 158 (260)
Q Consensus 80 ~~p~~v~~lvlid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
++|++|+++|++++..+.... ........... . .. .+ .... ............+.+....+..
T Consensus 135 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~----~---~~----~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~ 198 (302)
T PRK00870 135 EHPDRFARLVVANTGLPTGDGPMPDAFWAWRAF----S---QY----SP-VLPV----GRLVNGGTVRDLSDAVRAAYDA 198 (302)
T ss_pred hChhheeEEEEeCCCCCCccccchHHHhhhhcc----c---cc----Cc-hhhH----HHHhhccccccCCHHHHHHhhc
Confidence 999999999999864322111 00000000000 0 00 00 0000 0000000011112121111100
Q ss_pred hcceec-CCceEEeeccccccccc---cCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcE-
Q psy16156 159 RAVSAR-DGGFVFNFDQRLKNKIY---LVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH- 233 (260)
Q Consensus 159 ~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~- 233 (260)
...... ..+... ...+..... ........+..++++++||++|+|++|.+.+. .. +.+.... |+.+
T Consensus 199 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~-----~~-~~~~~~~-~~~~~ 269 (302)
T PRK00870 199 PFPDESYKAGARA--FPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGG-----GD-AILQKRI-PGAAG 269 (302)
T ss_pred ccCChhhhcchhh--hhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccC-----ch-HHHHhhc-ccccc
Confidence 000000 000000 000000000 00011123456789999999999999987653 11 2333322 4554
Q ss_pred --EEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 234 --VEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 234 --~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
++.++ +||++++|+|+.|++.|.+|++
T Consensus 270 ~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 299 (302)
T PRK00870 270 QPHPTIKGAGHFLQEDSGEELAEAVLEFIR 299 (302)
T ss_pred cceeeecCCCccchhhChHHHHHHHHHHHh
Confidence 77888 5999999999999999999984
No 8
>KOG1454|consensus
Probab=99.98 E-value=3.3e-31 Score=219.01 Aligned_cols=248 Identities=25% Similarity=0.324 Sum_probs=151.8
Q ss_pred CcccccchHhhhccCCCC--CeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPAR--YYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~--y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
|.++..+|+++++.|++. ++|+++|++|||.|++.+.+..|++.++++-+..++...+.++++||||||||++|..+|
T Consensus 67 F~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~A 146 (326)
T KOG1454|consen 67 FGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAA 146 (326)
T ss_pred ccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHH
Confidence 678999999999999987 999999999999777666666799999999999999999999999999999999999999
Q ss_pred HhCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcC---CCC-CCCCHHHHHHHHHhccccCCCCHHHHH
Q psy16156 79 AMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNN---RTQ-PVYTKEQVVSKLKQRLLLNEISTESAE 154 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
+.+|+.|++||++|..++.....+.........+..+......... ..+ ..+.+. ................+...
T Consensus 147 a~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 225 (326)
T KOG1454|consen 147 AYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG-LLRCLKVVYTDPSRLLEKLL 225 (326)
T ss_pred HhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh-hhcceeeeccccccchhhhh
Confidence 9999999999966522211111111111111111111111111000 000 001110 00000000000001111111
Q ss_pred HHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhcc-ccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcE
Q psy16156 155 ILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQ-CQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH 233 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (260)
.+ +.+ +....++++.++..........+.....++++. ||+|+|||++|..++. +. .+.++... |+++
T Consensus 226 ~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~----~~-~~~~~~~~-pn~~ 294 (326)
T KOG1454|consen 226 HL----LSR-PVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPL----EL-AEELKKKL-PNAE 294 (326)
T ss_pred hh----eec-ccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCH----HH-HHHHHhhC-CCce
Confidence 11 111 001112333332221111111123445678887 9999999999998775 22 33444433 7999
Q ss_pred EEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 234 VEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 234 ~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+++++ +||++|+|.|+.+++.|..|+.
T Consensus 295 ~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~ 322 (326)
T KOG1454|consen 295 LVEIPGAGHLPHLERPEEVAALLRSFIA 322 (326)
T ss_pred EEEeCCCCcccccCCHHHHHHHHHHHHH
Confidence 99999 6999999999999999999973
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2.6e-31 Score=218.02 Aligned_cols=237 Identities=11% Similarity=0.094 Sum_probs=140.4
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|.+++..|+.+++.|+++|+||++|+||||.|+.. ....|++.++++++.++++++++++++|+||||||.||+.+|..
T Consensus 43 ~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~ 121 (286)
T PRK03204 43 NPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERP-SGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVE 121 (286)
T ss_pred CCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCC-CccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHh
Confidence 45567789999999998999999999999999863 33358889999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhc
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRA 160 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++|+++|++++....+..... ....... ..... ...........+++........++++....+..
T Consensus 122 ~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (286)
T PRK03204 122 RADRVRGVVLGNTWFWPADTLAM--KAFSRVM---SSPPV-----QYAILRRNFFVERLIPAGTEHRPSSAVMAHYRA-- 189 (286)
T ss_pred ChhheeEEEEECccccCCCchhH--HHHHHHh---ccccc-----hhhhhhhhHHHHHhccccccCCCCHHHHHHhcC--
Confidence 99999999998754311111100 0000000 00000 000000000111111110011222222221110
Q ss_pred ceecCCceEEeeccccccccccCCC-HH---HHHHHHHh--ccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEE
Q psy16156 161 VSARDGGFVFNFDQRLKNKIYLVMT-ED---QQHSIIRN--IQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHV 234 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~--i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~ 234 (260)
..... .. +.. .......... .. .....+.+ +++||++|+|++|...++ . ...+.+++.. |+.++
T Consensus 190 ~~~~~-~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~---~-~~~~~~~~~i-p~~~~ 259 (286)
T PRK03204 190 VQPNA-AA---RRG-VAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRP---K-TILPRLRATF-PDHVL 259 (286)
T ss_pred CCCCH-HH---HHH-HHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCc---H-HHHHHHHHhc-CCCeE
Confidence 00000 00 000 0000000000 00 01111122 289999999999986533 1 2233444433 68999
Q ss_pred EEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 235 EMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 235 ~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+.++ +||++++|+|++|++.|.+||.
T Consensus 260 ~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 260 VELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred EEcCCCcccccccCHHHHHHHHHHhcC
Confidence 9998 6999999999999999999983
No 10
>KOG4178|consensus
Probab=99.97 E-value=2.1e-31 Score=212.41 Aligned_cols=238 Identities=16% Similarity=0.227 Sum_probs=146.6
Q ss_pred cccccchHhhhccCCCC-CeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 2 QDNAASFDKLLPLLPAR-YYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~~-y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
++++-+|+.+++.|+.+ |||+|+|+||+|.|+.++.-..|++..++.|+..++++||.++++++||+|||+||+.+|..
T Consensus 54 Pe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~ 133 (322)
T KOG4178|consen 54 PESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALF 133 (322)
T ss_pred CccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHh
Confidence 56788999999999987 99999999999999985544679999999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHH----HHH-----HHHhHhHHHhhcCCCCCCCCHHHHHH-HHHhcccc-----
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKV----RDI-----LTNQMNLEEKLNNRTQPVYTKEQVVS-KLKQRLLL----- 145 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----- 145 (260)
+|++|+++|+++++.+.+. .+ ..... .+. ++.....+..++ ....+... .+...-..
T Consensus 134 ~Perv~~lv~~nv~~~~p~-~~-~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s------~~~~~~~~~~~~~~~~~~~~~~ 205 (322)
T KOG4178|consen 134 YPERVDGLVTLNVPFPNPK-LK-PLDSSKAIFGKSYYICLFQEPGKPETELS------KDDTEMLVKTFRTRKTPGPLIV 205 (322)
T ss_pred ChhhcceEEEecCCCCCcc-cc-hhhhhccccCccceeEeccccCcchhhhc------cchhHHhHHhhhccccCCcccc
Confidence 9999999999997764211 11 00000 000 000000000000 00011111 11110000
Q ss_pred C--------CCCHHHHHHHHHhcceecCCc-eEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcc
Q psy16156 146 N--------EISTESAEILFTRAVSARDGG-FVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVN 216 (260)
Q Consensus 146 ~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~ 216 (260)
. .++.+..+.+........-.| +.+++..+ ...+.....+.++++||++|+|+.|.+.+..
T Consensus 206 ~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~--------r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p-- 275 (322)
T KOG4178|consen 206 PKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFR--------RNWEAAPWALAKITIPVLFIWGDLDPVLPYP-- 275 (322)
T ss_pred CCCCCCccchhhHHHHHHHHhccccccccccchhhHHHh--------hCchhccccccccccceEEEEecCcccccch--
Confidence 0 012222322221110000001 11111100 0000112346799999999999999876541
Q ss_pred hhhHHHHhhhhCCCCc-EEEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 217 ENYIGTYCLYSRHPKF-HVEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 217 ~~~~~~~~~~~~~p~~-~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
...+..++.. |+. +.+.++ +||+++.|+|++++++|.+|++
T Consensus 276 --~~~~~~rk~v-p~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~ 318 (322)
T KOG4178|consen 276 --IFGELYRKDV-PRLTERVVIEGIGHFVQQEKPQEVNQAILGFIN 318 (322)
T ss_pred --hHHHHHHHhh-ccccceEEecCCcccccccCHHHHHHHHHHHHH
Confidence 2244555544 455 445555 5999999999999999999984
No 11
>PLN02578 hydrolase
Probab=99.97 E-value=7.2e-31 Score=221.52 Aligned_cols=242 Identities=15% Similarity=0.152 Sum_probs=146.0
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|.+++..|+.+++.|+++|+|+++|+||||.|++.. ..|+...+++|+.+++++++.++++||||||||+||+.+|.+
T Consensus 95 ~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~ 172 (354)
T PLN02578 95 FGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVG 172 (354)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcc--cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHh
Confidence 456788999999999999999999999999998733 358888999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchh----------HHHHH-----HHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHh-ccc
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVE----------DTLTK-----VRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQ-RLL 144 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 144 (260)
+|++|+++|++++.+....... ..... .............. .. .... ..++.... .+.
T Consensus 173 ~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~-~~~~~~~~~~~~ 246 (354)
T PLN02578 173 YPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF---WQ--AKQP-SRIESVLKSVYK 246 (354)
T ss_pred ChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH---HH--hcCH-HHHHHHHHHhcC
Confidence 9999999999986543211100 00000 00000000000000 00 0000 11111111 100
Q ss_pred -cCCCCHHHHHHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHH
Q psy16156 145 -LNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTY 223 (260)
Q Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~ 223 (260)
....++...+.+.... .+.+............... ....+..+.++++++|+++|+|++|..++. .. .+.
T Consensus 247 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~----~~-~~~ 317 (354)
T PLN02578 247 DKSNVDDYLVESITEPA---ADPNAGEVYYRLMSRFLFN-QSRYTLDSLLSKLSCPLLLLWGDLDPWVGP----AK-AEK 317 (354)
T ss_pred CcccCCHHHHHHHHhcc---cCCchHHHHHHHHHHHhcC-CCCCCHHHHhhcCCCCEEEEEeCCCCCCCH----HH-HHH
Confidence 1111221111111000 0000000000000000000 000113456789999999999999986554 22 334
Q ss_pred hhhhCCCCcEEEEEcCCCCCCCCChHHHHHHHHhhhC
Q psy16156 224 CLYSRHPKFHVEMVDSGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 224 ~~~~~~p~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+.... |+.+++.+++||++|.|+|++|++.|.+|++
T Consensus 318 l~~~~-p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 318 IKAFY-PDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 44443 6889888888999999999999999999984
No 12
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=1.9e-30 Score=207.94 Aligned_cols=226 Identities=15% Similarity=0.244 Sum_probs=138.3
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|+.++..|+++++.|+ +|+||++|+||||.|+.. . ..++.++++|+.++++++++++++||||||||.||+.+|.+
T Consensus 11 ~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~-~--~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 11 LLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAI-S--VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred CCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCc-c--ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHh
Confidence 5678899999999996 699999999999999863 2 24788999999999999999999999999999999999999
Q ss_pred Ccch-hhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHh
Q psy16156 81 FPQL-MDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTR 159 (260)
Q Consensus 81 ~p~~-v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
+|+. |+++|++++..... ........... ...+. ..+ .. .........+.........+.+....+...
T Consensus 87 ~~~~~v~~lvl~~~~~~~~-~~~~~~~~~~~-~~~~~---~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (242)
T PRK11126 87 GLAGGLCGLIVEGGNPGLQ-NAEERQARWQN-DRQWA---QRF---RQ--EPLEQVLADWYQQPVFASLNAEQRQQLVAK 156 (242)
T ss_pred CCcccccEEEEeCCCCCCC-CHHHHHHHHhh-hHHHH---HHh---cc--CcHHHHHHHHHhcchhhccCccHHHHHHHh
Confidence 9765 99999987553221 11111110000 00000 000 00 001111111111000111222222111110
Q ss_pred cceecCCceEEeeccccccccc--cCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEE
Q psy16156 160 AVSARDGGFVFNFDQRLKNKIY--LVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV 237 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 237 (260)
. .. ..+. ....... ......+.+..+.++++|+++|+|++|..... .... ++.+++.+
T Consensus 157 ~-~~-~~~~------~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~---------~~~~---~~~~~~~i 216 (242)
T PRK11126 157 R-SN-NNGA------AVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQA---------LAQQ---LALPLHVI 216 (242)
T ss_pred c-cc-CCHH------HHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHHH---------HHHH---hcCeEEEe
Confidence 0 00 0000 0000000 00111234556889999999999999974211 1111 25789999
Q ss_pred c-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 238 D-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 238 ~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+ +||++++|+|+++++.|.+|++
T Consensus 217 ~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 217 PNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred CCCCCchhhhChHHHHHHHHHHHh
Confidence 8 5999999999999999999984
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=1.2e-30 Score=213.84 Aligned_cols=235 Identities=16% Similarity=0.190 Sum_probs=134.5
Q ss_pred CcccccchHh---hhccC-CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHH
Q psy16156 1 MQDNAASFDK---LLPLL-PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 1 ~~~~~~~w~~---~~~~L-~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~ 76 (260)
|..+...|.. .+..| +++|+|+++|+||||+|+........+ ..+++|+.++++.+++++++++||||||+||+.
T Consensus 39 ~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~ 117 (282)
T TIGR03343 39 GGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALN 117 (282)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHH
Confidence 3445556653 33444 457999999999999998632211122 256899999999999999999999999999999
Q ss_pred HHHhCcchhhhHHhhcccCCCCcchhH-HHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhc-c-ccCCCCHHHH
Q psy16156 77 YAAMFPQLMDRLILLDAMNQRKTKVED-TLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQR-L-LLNEISTESA 153 (260)
Q Consensus 77 ~a~~~p~~v~~lvlid~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~ 153 (260)
+|.++|++|+++|++++.......... ....... +.+... . .... ....+... . .....+.+..
T Consensus 118 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T TIGR03343 118 FALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKL----LFKLYA------E--PSYE-TLKQMLNVFLFDQSLITEELL 184 (282)
T ss_pred HHHhChHhhceEEEECCCCCCccccccCchHHHHH----HHHHhc------C--CCHH-HHHHHHhhCccCcccCcHHHH
Confidence 999999999999999864311100000 0000000 000000 0 0000 11111110 0 0011111111
Q ss_pred HHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcE
Q psy16156 154 EILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH 233 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (260)
+..... ........ . .. ............+....++++++|+|+|+|++|..++. +... .+.... |+++
T Consensus 185 ~~~~~~-~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~----~~~~-~~~~~~-~~~~ 253 (282)
T TIGR03343 185 QGRWEN-IQRQPEHL--K-NF-LISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPL----DHGL-KLLWNM-PDAQ 253 (282)
T ss_pred HhHHHH-hhcCHHHH--H-HH-HHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCc----hhHH-HHHHhC-CCCE
Confidence 111000 00000000 0 00 00000001111123456789999999999999997654 2323 333333 6899
Q ss_pred EEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 234 VEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 234 ~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
++.++ +||++++|+|+.|++.|.+||+
T Consensus 254 ~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 254 LHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99998 5999999999999999999984
No 14
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=1.3e-29 Score=214.40 Aligned_cols=233 Identities=17% Similarity=0.191 Sum_probs=129.9
Q ss_pred ccCCCCCeEEEEcCCCCCCCCCCCCC-----CccchhhHHHHHHHH-HHHcCCceEE-EEEeChhHHHHHHHHHhCcchh
Q psy16156 13 PLLPARYYYVCIDLPGHGLSSHFPPG-----MLLDWLNYLLACHRV-VNHFAWTKFI-WLGHSLGGQLGTHYAAMFPQLM 85 (260)
Q Consensus 13 ~~L~~~y~vi~~Dl~GhG~S~~~~~~-----~~~~~~~~a~dl~~~-~~~l~~~~~~-lvGhSmGG~ia~~~a~~~p~~v 85 (260)
+.++++|+||++|+||||.|+..... ..|++.++++|+.++ ++++++++++ ||||||||+||+.+|.+||++|
T Consensus 100 ~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V 179 (360)
T PRK06489 100 PLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFM 179 (360)
T ss_pred cccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhh
Confidence 33477899999999999999863221 147889999998885 4889999986 8999999999999999999999
Q ss_pred hhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCH---HHHHHHH---Hh----ccccCCCCHHHHHH
Q psy16156 86 DRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTK---EQVVSKL---KQ----RLLLNEISTESAEI 155 (260)
Q Consensus 86 ~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~----~~~~~~~~~~~~~~ 155 (260)
+++|++++................ ...+...... . ........ ......+ .. .+............
T Consensus 180 ~~LVLi~s~~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T PRK06489 180 DALMPMASQPTEMSGRNWMWRRML--IESIRNDPAW-N-NGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADK 255 (360)
T ss_pred heeeeeccCcccccHHHHHHHHHH--HHHHHhCCCC-C-CCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHH
Confidence 999999865311111111011000 0000000000 0 00000000 0010000 00 00000111111111
Q ss_pred HHHhcceecCCceEEeeccc-cccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEE
Q psy16156 156 LFTRAVSARDGGFVFNFDQR-LKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHV 234 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~ 234 (260)
.+......... .+.. .... .......+....+++|++|||+|+|++|...+. +....+.+.... |+.++
T Consensus 256 ~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~---~~~~~~~la~~i-p~a~l 325 (360)
T PRK06489 256 LVDERLAAPVT-----ADANDFLYQ-WDSSRDYNPSPDLEKIKAPVLAINSADDERNPP---ETGVMEAALKRV-KHGRL 325 (360)
T ss_pred HHHHHHHhhhh-----cCHHHHHHH-HHHhhccChHHHHHhCCCCEEEEecCCCcccCh---hhHHHHHHHHhC-cCCeE
Confidence 11111110000 0000 0000 000011123567899999999999999987654 111112344333 68999
Q ss_pred EEEcC-----CCCCCCCChHHHHHHHHhhhC
Q psy16156 235 EMVDS-----GHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 235 ~~~~~-----gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+++++ ||+++ |+|++|++.|.+||+
T Consensus 326 ~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 326 VLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred EEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 99984 99997 899999999999984
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=3.3e-30 Score=208.11 Aligned_cols=228 Identities=18% Similarity=0.257 Sum_probs=143.0
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|.++...|..++..|+++|+||++|+||||+|+.. + .+++.++++|+.++++++++++++||||||||++|+.+|.+
T Consensus 25 ~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~--~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 25 LFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRD-P--VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred CCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCC-C--CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHh
Confidence 45677899999999999999999999999999862 2 47889999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhc
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRA 160 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++|+++|++++.+.... . .........+.. ... ............+... +..+....+....
T Consensus 102 ~~~~v~~lvli~~~~~~~~-~-~~~~~~~~~~~~---~~~------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 165 (255)
T PRK10673 102 APDRIDKLVAIDIAPVDYH-V-RRHDEIFAAINA---VSE------AGATTRQQAAAIMRQH-----LNEEGVIQFLLKS 165 (255)
T ss_pred CHhhcceEEEEecCCCCcc-c-hhhHHHHHHHHH---hhh------cccccHHHHHHHHHHh-----cCCHHHHHHHHhc
Confidence 9999999999985432111 1 110111011000 000 0001111111111111 1111111111111
Q ss_pred ceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-C
Q psy16156 161 VSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-S 239 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~ 239 (260)
... ..+.+....... ..........++++++|+|+|+|++|..++. +. .+.+.... |+.+++.++ +
T Consensus 166 ~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~----~~-~~~~~~~~-~~~~~~~~~~~ 232 (255)
T PRK10673 166 FVD--GEWRFNVPVLWD-----QYPHIVGWEKIPAWPHPALFIRGGNSPYVTE----AY-RDDLLAQF-PQARAHVIAGA 232 (255)
T ss_pred CCc--ceeEeeHHHHHH-----hHHHHhCCcccCCCCCCeEEEECCCCCCCCH----HH-HHHHHHhC-CCcEEEEeCCC
Confidence 111 111111100000 0000001123567899999999999986553 22 33444433 689998898 5
Q ss_pred CCCCCCCChHHHHHHHHhhhC
Q psy16156 240 GHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 240 gH~~~~e~p~~~~~~i~~fl~ 260 (260)
||++++|+|+.+++.|.+||.
T Consensus 233 gH~~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 233 GHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred CCeeeccCHHHHHHHHHHHHh
Confidence 999999999999999999984
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=3.7e-30 Score=217.25 Aligned_cols=238 Identities=18% Similarity=0.255 Sum_probs=142.0
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCC--CCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPP--GMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~--~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
|+.++..|+.+++.|+++|+||++|+||||.|+..+. +..|++.++++|+.++++++++++++||||||||+||+.+|
T Consensus 136 ~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a 215 (383)
T PLN03084 136 FPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYA 215 (383)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHH
Confidence 5678889999999999999999999999999987432 23589999999999999999999999999999999999999
Q ss_pred HhCcchhhhHHhhcccCCCCc-chhHHHHHHHHHH-HHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHH
Q psy16156 79 AMFPQLMDRLILLDAMNQRKT-KVEDTLTKVRDIL-TNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEIL 156 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
.++|++|+++|+++++..... ........+...+ ..+.. . ..................+++....+
T Consensus 216 ~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~e~~~~~ 283 (383)
T PLN03084 216 SAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFS--------Q----DPLRASDKALTSCGPYAMKEDDAMVY 283 (383)
T ss_pred HhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhh--------c----chHHHHhhhhcccCccCCCHHHHHHH
Confidence 999999999999997542110 0111111110000 00000 0 00000000000000011122211111
Q ss_pred HHhcceecCCceEEeeccccccccccCCC--HHHHHHHH--HhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCc
Q psy16156 157 FTRAVSARDGGFVFNFDQRLKNKIYLVMT--EDQQHSII--RNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKF 232 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~ 232 (260)
..........++.+.. ..... ..... .......+ .++++||++|+|++|..++. +.. +.+... ++.
T Consensus 284 ~~~~~~~~~~~~~l~~--~~r~~-~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~----~~~-~~~a~~--~~a 353 (383)
T PLN03084 284 RRPYLTSGSSGFALNA--ISRSM-KKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNY----DGV-EDFCKS--SQH 353 (383)
T ss_pred hccccCCcchHHHHHH--HHHHh-hcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCH----HHH-HHHHHh--cCC
Confidence 1100000000000000 00000 00000 01111111 46899999999999986554 222 233333 367
Q ss_pred EEEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 233 HVEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 233 ~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+++.++ +||++++|+|+++++.|.+||+
T Consensus 354 ~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 354 KLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred eEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 899998 5999999999999999999985
No 17
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=3.9e-29 Score=210.11 Aligned_cols=245 Identities=13% Similarity=0.119 Sum_probs=132.8
Q ss_pred cccchHhhh---ccCC-CCCeEEEEcCCCCCCCCCCCCC-Cccchhh-----HHHHHHH----HHHHcCCce-EEEEEeC
Q psy16156 4 NAASFDKLL---PLLP-ARYYYVCIDLPGHGLSSHFPPG-MLLDWLN-----YLLACHR----VVNHFAWTK-FIWLGHS 68 (260)
Q Consensus 4 ~~~~w~~~~---~~L~-~~y~vi~~Dl~GhG~S~~~~~~-~~~~~~~-----~a~dl~~----~~~~l~~~~-~~lvGhS 68 (260)
+...|..++ +.|. ++|+||++|+||||.|+..+.. ..|++.+ +++|+.+ +++++++++ ++|||||
T Consensus 53 ~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S 132 (339)
T PRK07581 53 THQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWS 132 (339)
T ss_pred CcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeC
Confidence 445666554 4675 5799999999999999863221 1355443 5777765 778999999 5899999
Q ss_pred hhHHHHHHHHHhCcchhhhHHhhcccCCCCcchhHH-HHHHHHHHHHhHhHHHhhcCCCCCCC---CHHHHHH-------
Q psy16156 69 LGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDT-LTKVRDILTNQMNLEEKLNNRTQPVY---TKEQVVS------- 137 (260)
Q Consensus 69 mGG~ia~~~a~~~p~~v~~lvlid~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------- 137 (260)
|||+||+.+|.+||++|++||++++..... ..... .......+ ...... ........ .......
T Consensus 133 ~GG~va~~~a~~~P~~V~~Lvli~~~~~~~-~~~~~~~~~~~~~l---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (339)
T PRK07581 133 MGAQQTYHWAVRYPDMVERAAPIAGTAKTT-PHNFVFLEGLKAAL---TADPAF-NGGWYAEPPERGLRAHARVYAGWGF 207 (339)
T ss_pred HHHHHHHHHHHHCHHHHhhheeeecCCCCC-HHHHHHHHHHHHHH---HhCCCC-CCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998654211 11111 00010000 000000 00000000 0000000
Q ss_pred --HHHhccccCCCC----HHHHHHHHHhcceecC-CceEEeecccccc-ccccCCC-HHHHHHHHHhccccEEEEEeCCC
Q psy16156 138 --KLKQRLLLNEIS----TESAEILFTRAVSARD-GGFVFNFDQRLKN-KIYLVMT-EDQQHSIIRNIQCQTLCILSQDS 208 (260)
Q Consensus 138 --~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~~P~l~i~G~~d 208 (260)
.+.......... ++..+........... .++. ..-..... ....... ..+....+++|++|||+|+|++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D 286 (339)
T PRK07581 208 SQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLL-AMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTD 286 (339)
T ss_pred HHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHH-HHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCC
Confidence 000000000000 1111111111111000 0000 00000000 0000000 01345678899999999999999
Q ss_pred CcchhhcchhhHHHHhhhhCCCCcEEEEEc--CCCCCCCCChHHHHHHHHhhhC
Q psy16156 209 FNRVWIVNENYIGTYCLYSRHPKFHVEMVD--SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
...+. .. .+.+.... |++++++++ +||++++|+|+.++..|.+||+
T Consensus 287 ~~~p~----~~-~~~l~~~i-p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~ 334 (339)
T PRK07581 287 LYFPP----ED-CEAEAALI-PNAELRPIESIWGHLAGFGQNPADIAFIDAALK 334 (339)
T ss_pred CCCCH----HH-HHHHHHhC-CCCeEEEeCCCCCccccccCcHHHHHHHHHHHH
Confidence 87664 12 22333333 688999997 4999999999999999999984
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=4.1e-30 Score=216.17 Aligned_cols=85 Identities=20% Similarity=0.367 Sum_probs=76.0
Q ss_pred chHhhhc---cC-CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceE-EEEEeChhHHHHHHHHHhC
Q psy16156 7 SFDKLLP---LL-PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF-IWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 7 ~w~~~~~---~L-~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~-~lvGhSmGG~ia~~~a~~~ 81 (260)
.|..+++ .| +++|+||++|+||||.|.. ..|++.++++|+.+++++++++++ +||||||||+||+.+|.+|
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHC
Confidence 7999997 57 5789999999999998853 247788999999999999999775 7999999999999999999
Q ss_pred cchhhhHHhhcccC
Q psy16156 82 PQLMDRLILLDAMN 95 (260)
Q Consensus 82 p~~v~~lvlid~~~ 95 (260)
|++|++||++++..
T Consensus 160 P~~V~~LvLi~s~~ 173 (343)
T PRK08775 160 PARVRTLVVVSGAH 173 (343)
T ss_pred hHhhheEEEECccc
Confidence 99999999998754
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=1.5e-29 Score=206.56 Aligned_cols=237 Identities=15% Similarity=0.127 Sum_probs=142.0
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|..+...|+.+++.|+++|+|+++|+||||.|+... ...+++..+++|+.++++++++++++|+||||||++|+.+|.+
T Consensus 37 ~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 37 TGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPF-RFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred CCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcc-ccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHh
Confidence 456788999999999989999999999999998633 3358899999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHH-HHHHHHHHHH--hHh-HHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHH
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDT-LTKVRDILTN--QMN-LEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEIL 156 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+|++++++|++++........... .......... ... .... .. ... +....+.... ....++.....+
T Consensus 116 ~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~-~~~~~~~~~~-~~~~~~~~~~~~ 187 (278)
T TIGR03056 116 GPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSR----GA--ADQ-QRVERLIRDT-GSLLDKAGMTYY 187 (278)
T ss_pred CCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHh----hc--ccC-cchhHHhhcc-ccccccchhhHH
Confidence 999999999998542111000000 0000000000 000 0000 00 000 0001111100 001111111111
Q ss_pred HHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEE
Q psy16156 157 FTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (260)
....... .. ...... . ............++++++|+++|+|++|..++. +... .+.... |+.+++.
T Consensus 188 -~~~~~~~--~~---~~~~~~-~-~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~----~~~~-~~~~~~-~~~~~~~ 253 (278)
T TIGR03056 188 -GRLIRSP--AH---VDGALS-M-MAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP----DESK-RAATRV-PTATLHV 253 (278)
T ss_pred -HHhhcCc--hh---hhHHHH-H-hhcccccchhhhcccCCCCEEEEEeCCCcccCH----HHHH-HHHHhc-cCCeEEE
Confidence 0000000 00 000000 0 000000112345678999999999999987664 2222 333333 5789999
Q ss_pred EcC-CCCCCCCChHHHHHHHHhhhC
Q psy16156 237 VDS-GHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 237 ~~~-gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+++ ||+++.|+|+++++.|.+|++
T Consensus 254 ~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 254 VPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ECCCCCcccccCHHHHHHHHHHHhC
Confidence 985 999999999999999999985
No 20
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=7.1e-29 Score=213.47 Aligned_cols=94 Identities=24% Similarity=0.330 Sum_probs=81.9
Q ss_pred CcccccchHh-hhccCC----CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHH-HHHHHcCCceEEEEEeChhHHHH
Q psy16156 1 MQDNAASFDK-LLPLLP----ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACH-RVVNHFAWTKFIWLGHSLGGQLG 74 (260)
Q Consensus 1 ~~~~~~~w~~-~~~~L~----~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~-~~~~~l~~~~~~lvGhSmGG~ia 74 (260)
|..+...|.. +++.|+ ++|+||++|+||||+|++.. ...|++.++++++. .+++++++++++||||||||+||
T Consensus 210 ~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iA 288 (481)
T PLN03087 210 FISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILA 288 (481)
T ss_pred CCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHH
Confidence 5667788985 557775 57999999999999998732 34588999999994 89999999999999999999999
Q ss_pred HHHHHhCcchhhhHHhhcccC
Q psy16156 75 THYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 75 ~~~a~~~p~~v~~lvlid~~~ 95 (260)
+.+|.+||++|++||+++++.
T Consensus 289 l~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 289 LALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHhChHhccEEEEECCCc
Confidence 999999999999999998654
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=2.3e-28 Score=195.48 Aligned_cols=227 Identities=18% Similarity=0.264 Sum_probs=141.9
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|..+...|+.+++.|+++|+|+++|+||||.|+.. . ..+++.++++|+.++++.++.++++|+||||||++|+.+|.+
T Consensus 22 ~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~-~-~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 22 LGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAP-E-GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred cccchhhHHHHHHHhhcccEEEEecCCCCCCCCCC-C-CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHH
Confidence 45678899999999998999999999999999753 2 357899999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHHHHHH-HhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHh
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILT-NQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTR 159 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
+|++|+++|++++...... ...+......... ...... ........... .........+.+..
T Consensus 100 ~p~~v~~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~- 163 (251)
T TIGR02427 100 RPDRVRALVLSNTAAKIGT-PESWNARIAAVRAEGLAALA-------------DAVLERWFTPG-FREAHPARLDLYRN- 163 (251)
T ss_pred CHHHhHHHhhccCccccCc-hhhHHHHHhhhhhccHHHHH-------------HHHHHHHcccc-cccCChHHHHHHHH-
Confidence 9999999999986542111 1111110000000 000000 00000000000 00000111111100
Q ss_pred cceecC-CceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc
Q psy16156 160 AVSARD-GGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD 238 (260)
Q Consensus 160 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 238 (260)
.+.+.. .++. .. ...+...+....++++++|+++++|++|...+. +...+..+.. ++.+++.++
T Consensus 164 ~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~----~~~~~~~~~~--~~~~~~~~~ 228 (251)
T TIGR02427 164 MLVRQPPDGYA--------GC-CAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPP----ELVREIADLV--PGARFAEIR 228 (251)
T ss_pred HHHhcCHHHHH--------HH-HHHHhcccHHHHhhhcCCCeEEEEeccCCcCCh----HHHHHHHHhC--CCceEEEEC
Confidence 000000 0000 00 000011123456789999999999999997664 2222233333 578889998
Q ss_pred -CCCCCCCCChHHHHHHHHhhhC
Q psy16156 239 -SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 239 -~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+||++++|+|+.+++.|.+|++
T Consensus 229 ~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 229 GAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCCcccccChHHHHHHHHHHhC
Confidence 6999999999999999999984
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.96 E-value=6.1e-29 Score=200.11 Aligned_cols=232 Identities=17% Similarity=0.219 Sum_probs=141.9
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|.+++..|..+++.|+++|+|+++|+||||.|+..+ ...+++.++++|+.++++++++++++|+||||||++|+.+|.+
T Consensus 22 ~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 22 LGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGEL-PPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALR 100 (257)
T ss_pred CCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCC-cccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHH
Confidence 567889999999999989999999999999998632 3458899999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHh--ccccCCCCHHHHHHHHH
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQ--RLLLNEISTESAEILFT 158 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 158 (260)
+|++|+++|++++..... ...... .... ..++... ....+ ......+.. .+ .........+...
T Consensus 101 ~~~~v~~~i~~~~~~~~~-~~~~~~--~~~~-~~~~~~~------~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~- 166 (257)
T TIGR03611 101 YPERLLSLVLINAWSRPD-PHTRRC--FDVR-IALLQHA------GPEAY--VHAQALFLYPADW-ISENAARLAADEA- 166 (257)
T ss_pred ChHHhHHheeecCCCCCC-hhHHHH--HHHH-HHHHhcc------Ccchh--hhhhhhhhccccH-hhccchhhhhhhh-
Confidence 999999999998654211 111100 0000 0000000 00000 000000000 00 0000000000000
Q ss_pred hcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc
Q psy16156 159 RAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 238 (260)
..+... .+. ....... ..... .+....++++++|+++++|++|...+. +...+..+.. |+.+++.++
T Consensus 167 ~~~~~~-~~~----~~~~~~~-~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~----~~~~~~~~~~--~~~~~~~~~ 233 (257)
T TIGR03611 167 HALAHF-PGK----ANVLRRI-NALEA-FDVSARLDRIQHPVLLIANRDDMLVPY----TQSLRLAAAL--PNAQLKLLP 233 (257)
T ss_pred hccccc-Ccc----HHHHHHH-HHHHc-CCcHHHhcccCccEEEEecCcCcccCH----HHHHHHHHhc--CCceEEEEC
Confidence 000000 000 0000000 00000 012345778999999999999987654 2222233333 578888898
Q ss_pred -CCCCCCCCChHHHHHHHHhhhC
Q psy16156 239 -SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 239 -~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+||++++|+|+.+++.|.+||+
T Consensus 234 ~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 234 YGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred CCCCCccccCHHHHHHHHHHHhc
Confidence 6999999999999999999985
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=3.8e-29 Score=196.93 Aligned_cols=219 Identities=20% Similarity=0.262 Sum_probs=139.9
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+..++..|+.+++.|+++|+|+++|+||||.|+..+....+++.++++|+.+++++++.++++|+||||||.+++.+|.+
T Consensus 7 ~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 7 FGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp TTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccccccccccc
Confidence 45778999999999988999999999999999874332357899999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcch--hHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHH
Q psy16156 81 FPQLMDRLILLDAMNQRKTKV--EDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFT 158 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+|++|+++|+++++....... ......+...+....... ..........+ ...+.....+.
T Consensus 87 ~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~----~~~~~~~~~~~ 149 (228)
T PF12697_consen 87 YPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSL-------------RRLASRFFYRW----FDGDEPEDLIR 149 (228)
T ss_dssp SGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHH----HTHHHHHHHHH
T ss_pred cccccccceeecccccccccccccccchhhhhhhhcccccc-------------ccccccccccc----ccccccccccc
Confidence 999999999998765321100 000011111100000000 00000000000 00111111111
Q ss_pred hcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc
Q psy16156 159 RAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 238 (260)
.... .+...........+....++++++|+++++|++|...+. +.. +.+.... |+++++.++
T Consensus 150 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~----~~~-~~~~~~~-~~~~~~~~~ 211 (228)
T PF12697_consen 150 SSRR------------ALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPP----ESA-EELADKL-PNAELVVIP 211 (228)
T ss_dssp HHHH------------HHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHH----HHH-HHHHHHS-TTEEEEEET
T ss_pred cccc------------ccccccccccccccccccccccCCCeEEeecCCCCCCCH----HHH-HHHHHHC-CCCEEEEEC
Confidence 0000 000000000112234567899999999999999997653 232 3343333 689999998
Q ss_pred -CCCCCCCCChHHHHHH
Q psy16156 239 -SGHDMELEEPEKLSGL 254 (260)
Q Consensus 239 -~gH~~~~e~p~~~~~~ 254 (260)
+||++++|+|++|+++
T Consensus 212 ~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 212 GAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp TSSSTHHHHSHHHHHHH
T ss_pred CCCCccHHHCHHHHhcC
Confidence 5999999999999874
No 24
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=1.1e-28 Score=196.73 Aligned_cols=228 Identities=21% Similarity=0.201 Sum_probs=134.5
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|..++..|+.+++.|+++|+|+++|+||||.|+.. ..+++.++++++.+.+ .+++++|||||||.+|+.+|.+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 13 WGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGF---GPLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred CCCchhhHHHHHHhhccCeEEEEecCCcCccCCCC---CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHH
Confidence 56788999999999998999999999999999753 2367778888776554 3789999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcc--hh-HHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHh-ccccCCCCHHHHHHH
Q psy16156 81 FPQLMDRLILLDAMNQRKTK--VE-DTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQ-RLLLNEISTESAEIL 156 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 156 (260)
+|++|+++|++++....... .. .........+..... . ........+.. ..............+
T Consensus 86 ~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T TIGR01738 86 HPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLS--D----------DYQRTIERFLALQTLGTPTARQDARAL 153 (245)
T ss_pred CHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhh--h----------hHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 99999999999865421110 00 000000000000000 0 00000111100 000000011111111
Q ss_pred HHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEE
Q psy16156 157 FTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (260)
.. .+....... ...+... ...+...+....+.++++|+++|+|++|..++. +. .+.+.... |+.+++.
T Consensus 154 ~~-~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~----~~-~~~~~~~~-~~~~~~~ 221 (245)
T TIGR01738 154 KQ-TLLARPTPN----VQVLQAG-LEILATVDLRQPLQNISVPFLRLYGYLDGLVPA----KV-VPYLDKLA-PHSELYI 221 (245)
T ss_pred HH-HhhccCCCC----HHHHHHH-HHHhhcccHHHHHhcCCCCEEEEeecCCcccCH----HH-HHHHHHhC-CCCeEEE
Confidence 10 000000000 0000000 000111123456789999999999999987654 22 23333333 6899999
Q ss_pred Ec-CCCCCCCCChHHHHHHHHhhh
Q psy16156 237 VD-SGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 237 ~~-~gH~~~~e~p~~~~~~i~~fl 259 (260)
++ +||++++|+|++|++.|.+|+
T Consensus 222 ~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred eCCCCCCccccCHHHHHHHHHhhC
Confidence 98 599999999999999999996
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=8.7e-28 Score=191.84 Aligned_cols=235 Identities=19% Similarity=0.296 Sum_probs=142.7
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHH-HHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA-CHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~d-l~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
|+.+...|+.+++.|+++|+|+++|+||||.|+.......+++.+++++ +..+++.++.++++|+||||||.+|+.+|.
T Consensus 10 ~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~ 89 (251)
T TIGR03695 10 FLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYAL 89 (251)
T ss_pred CCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHH
Confidence 5678889999999999889999999999999986432235678899999 888999999999999999999999999999
Q ss_pred hCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhc--cc-cCCCCHHHHHHH
Q psy16156 80 MFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQR--LL-LNEISTESAEIL 156 (260)
Q Consensus 80 ~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 156 (260)
++|+.|+++|++++.................. ........ . ........+... .. ...++++....+
T Consensus 90 ~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR03695 90 QYPERVQGLILESGSPGLATEEERAARRQNDE--QLAQRFEQ-----E---GLEAFLDDWYQQPLFASQKNLPPEQRQAL 159 (251)
T ss_pred hCchheeeeEEecCCCCcCchHhhhhhhhcch--hhhhHHHh-----c---CccHHHHHHhcCceeeecccCChHHhHHH
Confidence 99999999999986432211111000000000 00000000 0 000011111100 00 011222222111
Q ss_pred HHhcceecCCceEEeecccccccc--ccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEE
Q psy16156 157 FTRAVSARDGGFVFNFDQRLKNKI--YLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHV 234 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~ 234 (260)
........ ........ .......+....+.++++|+++|+|++|...+. . .+.+.... |+.++
T Consensus 160 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-----~-~~~~~~~~-~~~~~ 224 (251)
T TIGR03695 160 RAKRLANN--------PEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQ-----I-AKEMQKLL-PNLTL 224 (251)
T ss_pred HHhccccc--------chHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHH-----H-HHHHHhcC-CCCcE
Confidence 11110000 00000000 000011123445788999999999999975321 2 22333333 57899
Q ss_pred EEEcC-CCCCCCCChHHHHHHHHhhhC
Q psy16156 235 EMVDS-GHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 235 ~~~~~-gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+.+++ ||++++|+|+.+++.|.+|++
T Consensus 225 ~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99984 999999999999999999985
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=5.2e-28 Score=204.07 Aligned_cols=90 Identities=22% Similarity=0.433 Sum_probs=77.1
Q ss_pred cchHhhh----ccCCCCCeEEEEcCCC--CCCCCCC---CCC-------CccchhhHHHHHHHHHHHcCCce-EEEEEeC
Q psy16156 6 ASFDKLL----PLLPARYYYVCIDLPG--HGLSSHF---PPG-------MLLDWLNYLLACHRVVNHFAWTK-FIWLGHS 68 (260)
Q Consensus 6 ~~w~~~~----~~L~~~y~vi~~Dl~G--hG~S~~~---~~~-------~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS 68 (260)
+.|+.++ +.++++|+||++|+|| ||.|... +.+ ..|++.++++|+.++++++++++ ++|||||
T Consensus 56 ~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S 135 (351)
T TIGR01392 56 GWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGS 135 (351)
T ss_pred CchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEC
Confidence 3699997 5557889999999999 6666431 111 14789999999999999999999 9999999
Q ss_pred hhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 69 LGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 69 mGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
|||+||+.+|.++|++|+++|++++..
T Consensus 136 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 136 MGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHChHhhheEEEEccCC
Confidence 999999999999999999999999764
No 27
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=4.1e-28 Score=204.60 Aligned_cols=233 Identities=14% Similarity=0.186 Sum_probs=136.2
Q ss_pred Ccccccc-hHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCc------eEEEEEeChhHH
Q psy16156 1 MQDNAAS-FDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWT------KFIWLGHSLGGQ 72 (260)
Q Consensus 1 ~~~~~~~-w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~------~~~lvGhSmGG~ 72 (260)
|.++... |+.+++.|++ +|+|+++|+||||.|+.. .+..+++.++++|+.++++.++.+ +++|+||||||+
T Consensus 96 ~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~-~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~ 174 (349)
T PLN02385 96 YGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGL-HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGA 174 (349)
T ss_pred CCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCC-CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchH
Confidence 3455444 6889999975 699999999999999863 333357889999999999887643 799999999999
Q ss_pred HHHHHHHhCcchhhhHHhhcccCCCCcch--hHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCH
Q psy16156 73 LGTHYAAMFPQLMDRLILLDAMNQRKTKV--EDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEIST 150 (260)
Q Consensus 73 ia~~~a~~~p~~v~~lvlid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (260)
||+.+|.++|++|+++|++++.+...... ..........+..... ............... . .
T Consensus 175 val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~~~~~~~~~~-----~---~ 238 (349)
T PLN02385 175 VALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLP--------KAKLVPQKDLAELAF-----R---D 238 (349)
T ss_pred HHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCC--------CceecCCCccccccc-----c---C
Confidence 99999999999999999998654221110 0111111111100000 000000000000000 0 0
Q ss_pred HHHHHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCC
Q psy16156 151 ESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHP 230 (260)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p 230 (260)
...+...... .. . +.................+....+.++++|+|+|+|++|.+++. ....+..+....+
T Consensus 239 ~~~~~~~~~~-~~---~--~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~----~~~~~l~~~~~~~ 308 (349)
T PLN02385 239 LKKRKMAEYN-VI---A--YKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP----SVSKFLYEKASSS 308 (349)
T ss_pred HHHHHHhhcC-cc---e--eCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh----HHHHHHHHHcCCC
Confidence 0000000000 00 0 00000000000000111233455788999999999999997764 2223333433224
Q ss_pred CcEEEEEc-CCCCCCCCChHH----HHHHHHhhhC
Q psy16156 231 KFHVEMVD-SGHDMELEEPEK----LSGLISDFLD 260 (260)
Q Consensus 231 ~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~ 260 (260)
+.+++.++ +||+++.|+|++ +++.|.+||+
T Consensus 309 ~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 309 DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 68999998 599999999987 7778888873
No 28
>KOG4409|consensus
Probab=99.95 E-value=6e-27 Score=187.62 Aligned_cols=94 Identities=24% Similarity=0.328 Sum_probs=82.0
Q ss_pred ccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCC--ccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGM--LLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~--~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
...+.|-+-.+.|++.++|+++|+||+|.|+.+.=.. ......+++-++++....|+++.+||||||||++|..||++
T Consensus 101 Ag~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlK 180 (365)
T KOG4409|consen 101 AGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALK 180 (365)
T ss_pred hhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHh
Confidence 4557788999999999999999999999999742111 12245889999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCC
Q psy16156 81 FPQLMDRLILLDAMNQ 96 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~ 96 (260)
||++|++|||+|+.++
T Consensus 181 yPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 181 YPERVEKLILVSPWGF 196 (365)
T ss_pred ChHhhceEEEeccccc
Confidence 9999999999998875
No 29
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1.5e-27 Score=202.89 Aligned_cols=89 Identities=19% Similarity=0.406 Sum_probs=74.9
Q ss_pred chHhhh----ccCCCCCeEEEEcCCCC-CCCCCCC----C-C-------CccchhhHHHHHHHHHHHcCCce-EEEEEeC
Q psy16156 7 SFDKLL----PLLPARYYYVCIDLPGH-GLSSHFP----P-G-------MLLDWLNYLLACHRVVNHFAWTK-FIWLGHS 68 (260)
Q Consensus 7 ~w~~~~----~~L~~~y~vi~~Dl~Gh-G~S~~~~----~-~-------~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS 68 (260)
.|+.++ +.++++|+||++|+||+ |.|+... . + ..|++.++++|+.++++++++++ ++|||||
T Consensus 76 ~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S 155 (379)
T PRK00175 76 WWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGS 155 (379)
T ss_pred chhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEEC
Confidence 589987 55578999999999993 5443211 0 0 14789999999999999999999 5999999
Q ss_pred hhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 69 LGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 69 mGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
|||+||+.+|.++|++|+++|++++..
T Consensus 156 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 156 MGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred HHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 999999999999999999999999765
No 30
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=1.5e-27 Score=194.30 Aligned_cols=231 Identities=17% Similarity=0.156 Sum_probs=137.7
Q ss_pred CcccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC-CceEEEEEeChhHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA-WTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhSmGG~ia~~~a 78 (260)
+..++..|+++++.|++ +|+|+++|+||||.|...+. ..++++++++++.+++++++ .++++||||||||++++.++
T Consensus 27 ~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a 105 (273)
T PLN02211 27 ISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAI 105 (273)
T ss_pred CCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHH
Confidence 34577899999999974 69999999999999864332 24789999999999999985 58999999999999999999
Q ss_pred HhCcchhhhHHhhcccCCCCcc-h-hHHHHHHHHHHHHhHhH---HHhhcCC-C-CCCCCHHHHHHHHHhccccCCCCHH
Q psy16156 79 AMFPQLMDRLILLDAMNQRKTK-V-EDTLTKVRDILTNQMNL---EEKLNNR-T-QPVYTKEQVVSKLKQRLLLNEISTE 151 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~~~~~~~-~-~~~~~~~~~~~~~~~~~---~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
.++|++|+++|++++..+.... . ..+..... ....+... ....... . .......++...+. ....+++
T Consensus 106 ~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 180 (273)
T PLN02211 106 HRFPKKICLAVYVAATMLKLGFQTDEDMKDGVP-DLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL----YQMSPQE 180 (273)
T ss_pred HhChhheeEEEEeccccCCCCCCHHHHHhcccc-chhhhccceeeeeccCCCCCCceeeeCHHHHHHHH----hcCCCHH
Confidence 9999999999999764321110 1 00100000 00000000 0000000 0 00000011111111 1222222
Q ss_pred HHHHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhc-cccEEEEEeCCCCcchhhcchhhHHHHhhhhCCC
Q psy16156 152 SAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNI-QCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHP 230 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p 230 (260)
....... .++.. .. ..+...+......++ ++|+++|+|++|..+++ +.+ +.+.... |
T Consensus 181 ~~~~~~~-~~~~~--~~-------------~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~----~~~-~~m~~~~-~ 238 (273)
T PLN02211 181 DSTLAAM-LLRPG--PI-------------LALRSARFEEETGDIDKVPRVYIKTLHDHVVKP----EQQ-EAMIKRW-P 238 (273)
T ss_pred HHHHHHH-hcCCc--Cc-------------cccccccccccccccCccceEEEEeCCCCCCCH----HHH-HHHHHhC-C
Confidence 2221111 01100 00 000001111123455 78999999999998765 233 3444333 4
Q ss_pred CcEEEEEcCCCCCCCCChHHHHHHHHhhh
Q psy16156 231 KFHVEMVDSGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 231 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 259 (260)
+.+++.+++||.+++++|+++++.|.++.
T Consensus 239 ~~~~~~l~~gH~p~ls~P~~~~~~i~~~a 267 (273)
T PLN02211 239 PSQVYELESDHSPFFSTPFLLFGLLIKAA 267 (273)
T ss_pred ccEEEEECCCCCccccCHHHHHHHHHHHH
Confidence 67888999999999999999999998764
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=4.4e-27 Score=192.07 Aligned_cols=240 Identities=18% Similarity=0.147 Sum_probs=136.2
Q ss_pred ccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCC-ccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 5 AASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGM-LLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 5 ~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~-~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
...|..+...|.+ +|+|+++|+||||.|+...... .+++.++++|+.++++++++++++|+||||||.+|+.+|.++|
T Consensus 39 ~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p 118 (288)
T TIGR01250 39 HEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYG 118 (288)
T ss_pred HHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCc
Confidence 3456677777775 6999999999999998632111 3789999999999999999999999999999999999999999
Q ss_pred chhhhHHhhcccCCCCcchhHHHHHHHHH-----HHHhHhHHHhhcCCCCCCCCHHHHHHHHHh-ccccCCCCHHHHHHH
Q psy16156 83 QLMDRLILLDAMNQRKTKVEDTLTKVRDI-----LTNQMNLEEKLNNRTQPVYTKEQVVSKLKQ-RLLLNEISTESAEIL 156 (260)
Q Consensus 83 ~~v~~lvlid~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 156 (260)
++|+++|++++....+... ......... ...+...... ..............+.. ........++.....
T Consensus 119 ~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (288)
T TIGR01250 119 QHLKGLIISSMLDSAPEYV-KELNRLRKELPPEVRAAIKRCEAS---GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHL 194 (288)
T ss_pred cccceeeEecccccchHHH-HHHHHHHhhcChhHHHHHHHHHhc---cCcchHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence 9999999988654211111 110000000 0000000000 00000001111111110 000001111111111
Q ss_pred HHhcceecCCceEEee-ccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEE
Q psy16156 157 FTRAVSARDGGFVFNF-DQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVE 235 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 235 (260)
... ... .-+.... ...... .......+....++++++|+++++|++|...+. .. +.+.... |+.+++
T Consensus 195 ~~~-~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~-----~~-~~~~~~~-~~~~~~ 262 (288)
T TIGR01250 195 KSG-MNT--NVYNIMQGPNEFTI--TGNLKDWDITDKLSEIKVPTLLTVGEFDTMTPE-----AA-REMQELI-AGSRLV 262 (288)
T ss_pred hhc-cCH--HHHhcccCCccccc--cccccccCHHHHhhccCCCEEEEecCCCccCHH-----HH-HHHHHhc-cCCeEE
Confidence 000 000 0000000 000000 001111123456789999999999999985321 22 2333332 578888
Q ss_pred EEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 236 MVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 236 ~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
.++ +||++++|+|+++++.|.+||+
T Consensus 263 ~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 263 VFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred EeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 888 6999999999999999999985
No 32
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=1.2e-26 Score=189.61 Aligned_cols=229 Identities=14% Similarity=0.149 Sum_probs=131.8
Q ss_pred CcccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc----CCceEEEEEeChhHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ia~ 75 (260)
|.+++..|+.+++.|++ +|+|+++|+||||.|+.. .....++.++++|+.+.++.+ +.++++|+||||||+||+
T Consensus 34 ~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~-~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~ 112 (276)
T PHA02857 34 AGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGE-KMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISI 112 (276)
T ss_pred CccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCc-cCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHH
Confidence 56789999999999976 699999999999999752 221224556677777777654 346899999999999999
Q ss_pred HHHHhCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHH
Q psy16156 76 HYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEI 155 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
.+|.++|++|+++|++++... .... .............. .... .......... ... .+....
T Consensus 113 ~~a~~~p~~i~~lil~~p~~~-~~~~-~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~---------~~~--~~~~~~ 174 (276)
T PHA02857 113 LAAYKNPNLFTAMILMSPLVN-AEAV-PRLNLLAAKLMGIF-YPNK----IVGKLCPESV---------SRD--MDEVYK 174 (276)
T ss_pred HHHHhCccccceEEEeccccc-cccc-cHHHHHHHHHHHHh-CCCC----ccCCCCHhhc---------cCC--HHHHHH
Confidence 999999999999999986432 1111 00111111100000 0000 0000000000 000 000000
Q ss_pred HHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEE
Q psy16156 156 LFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVE 235 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 235 (260)
+. ............ .+... ......+....+.++++|||+|+|++|.+++. +...+..+... ++.+++
T Consensus 175 ~~---~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~----~~~~~l~~~~~-~~~~~~ 242 (276)
T PHA02857 175 YQ---YDPLVNHEKIKA--GFASQ--VLKATNKVRKIIPKIKTPILILQGTNNEISDV----SGAYYFMQHAN-CNREIK 242 (276)
T ss_pred Hh---cCCCccCCCccH--HHHHH--HHHHHHHHHHhcccCCCCEEEEecCCCCcCCh----HHHHHHHHHcc-CCceEE
Confidence 00 000000000000 00000 00001233456789999999999999998765 22233334443 367888
Q ss_pred EEc-CCCCCCCCCh---HHHHHHHHhhhC
Q psy16156 236 MVD-SGHDMELEEP---EKLSGLISDFLD 260 (260)
Q Consensus 236 ~~~-~gH~~~~e~p---~~~~~~i~~fl~ 260 (260)
.++ +||.++.|++ +++.+.|.+||+
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIF 271 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHH
Confidence 998 5999999987 467788888873
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=6.5e-27 Score=199.95 Aligned_cols=94 Identities=24% Similarity=0.332 Sum_probs=79.6
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCcc-c---h-hhHHHHHHHHHHHcCCceEEEEEeChhHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLL-D---W-LNYLLACHRVVNHFAWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~-~---~-~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~ 75 (260)
|+.+...|.++++.|+++|+|+++|+||||.|+... ..+ + . ..+++++.++++.+++++++|+||||||++|+
T Consensus 114 ~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~--~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~ 191 (402)
T PLN02894 114 YGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPD--FTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAA 191 (402)
T ss_pred CCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCC--cccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHH
Confidence 456778899999999989999999999999998632 111 1 1 24677888999999999999999999999999
Q ss_pred HHHHhCcchhhhHHhhcccCC
Q psy16156 76 HYAAMFPQLMDRLILLDAMNQ 96 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~~~ 96 (260)
.+|.++|++|+++|++++.+.
T Consensus 192 ~~a~~~p~~v~~lvl~~p~~~ 212 (402)
T PLN02894 192 KYALKHPEHVQHLILVGPAGF 212 (402)
T ss_pred HHHHhCchhhcEEEEECCccc
Confidence 999999999999999987653
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=3.9e-25 Score=188.04 Aligned_cols=224 Identities=18% Similarity=0.168 Sum_probs=140.6
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|..+...|..+++.|.+.|+|+++|+||||.|...+ ..+++.++++++.++++.++.++++|+||||||.+|+.+|.+
T Consensus 140 ~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 140 FGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAV--GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred CCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHh
Confidence 567889999999999988999999999999997532 246788999999999999999999999999999999999999
Q ss_pred CcchhhhHHhhcccCCCCcchhHHHHHHH-----HHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHH
Q psy16156 81 FPQLMDRLILLDAMNQRKTKVEDTLTKVR-----DILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEI 155 (260)
Q Consensus 81 ~p~~v~~lvlid~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
+|++|.++|++++....+.........+. ..+..++.. . . ........ ................ .....
T Consensus 218 ~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 291 (371)
T PRK14875 218 APQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLEL--L-F-ADPALVTR-QMVEDLLKYKRLDGVD-DALRA 291 (371)
T ss_pred CchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHH--H-h-cChhhCCH-HHHHHHHHHhccccHH-HHHHH
Confidence 99999999999865422211111111000 000000000 0 0 00000000 0111111100000000 00000
Q ss_pred HHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEE
Q psy16156 156 LFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVE 235 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 235 (260)
+.. ..........+....+.++++|+|+++|++|..++. +. .+... ++++++
T Consensus 292 ~~~-------------------~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~----~~----~~~l~-~~~~~~ 343 (371)
T PRK14875 292 LAD-------------------ALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPA----AH----AQGLP-DGVAVH 343 (371)
T ss_pred HHH-------------------HhccCcccchhHHHHHhcCCCCEEEEEECCCCccCH----HH----Hhhcc-CCCeEE
Confidence 000 000011111234556789999999999999987653 12 12222 367888
Q ss_pred EEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 236 MVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 236 ~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
.++ +||++++|+|+.+++.|.+||+
T Consensus 344 ~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 344 VLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred EeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 998 6999999999999999999985
No 35
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=5.3e-26 Score=221.11 Aligned_cols=94 Identities=17% Similarity=0.236 Sum_probs=84.7
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCC------CCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPP------GMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLG 74 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~------~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia 74 (260)
|+.+...|..+++.|+++|+||++|+||||.|+..+. ...++++.+++++.++++++++++++|+||||||+||
T Consensus 1380 ~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iA 1459 (1655)
T PLN02980 1380 FLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIA 1459 (1655)
T ss_pred CCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHH
Confidence 5778899999999999899999999999999975321 2247889999999999999999999999999999999
Q ss_pred HHHHHhCcchhhhHHhhccc
Q psy16156 75 THYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 75 ~~~a~~~p~~v~~lvlid~~ 94 (260)
+.+|.+||++|+++|++++.
T Consensus 1460 l~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1460 LYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred HHHHHhChHhhCEEEEECCC
Confidence 99999999999999999854
No 36
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=9.5e-26 Score=188.91 Aligned_cols=225 Identities=14% Similarity=0.193 Sum_probs=128.0
Q ss_pred chHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC------ceEEEEEeChhHHHHHHHHH
Q psy16156 7 SFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW------TKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 7 ~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhSmGG~ia~~~a~ 79 (260)
.|..++..|++ +|+|+++|+||||+|+.. .+...++..+++|+.++++.++. .+++|+||||||++|+.++.
T Consensus 75 ~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 75 TFQSTAIFLAQMGFACFALDLEGHGRSEGL-RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHL 153 (330)
T ss_pred ehhHHHHHHHhCCCEEEEecCCCCCCCCCc-cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHh
Confidence 45666777875 699999999999999752 33335788999999999998753 36999999999999999999
Q ss_pred hCcchhhhHHhhcccCCCCcch--hHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHH
Q psy16156 80 MFPQLMDRLILLDAMNQRKTKV--EDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILF 157 (260)
Q Consensus 80 ~~p~~v~~lvlid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
++|++|+++|++++........ .............+..... ..+... . . ...........+.
T Consensus 154 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~----~----~~~~~~~~~~~~~ 217 (330)
T PLN02298 154 ANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLA-----IVPTAD---L----L----EKSVKVPAKKIIA 217 (330)
T ss_pred cCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCc-----cccCCC---c----c----cccccCHHHHHHH
Confidence 9999999999998654211110 0000000000000000000 000000 0 0 0000000000000
Q ss_pred HhcceecCCceEEeeccccccccccCCC-HHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEE
Q psy16156 158 TRAVSARDGGFVFNFDQRLKNKIYLVMT-EDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (260)
.. ....+ ...+..... ..... .+.....+.++++|+|+|+|++|.+++. +...+..+....++.+++.
T Consensus 218 ~~----~~~~~--~~~~~~~~~-~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~----~~~~~l~~~i~~~~~~l~~ 286 (330)
T PLN02298 218 KR----NPMRY--NGKPRLGTV-VELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDP----DVSRALYEEAKSEDKTIKI 286 (330)
T ss_pred Hh----Ccccc--CCCccHHHH-HHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCH----HHHHHHHHHhccCCceEEE
Confidence 00 00000 000000000 00011 1123456789999999999999998765 2323333443224689999
Q ss_pred EcC-CCCCCCCChHH----HHHHHHhhh
Q psy16156 237 VDS-GHDMELEEPEK----LSGLISDFL 259 (260)
Q Consensus 237 ~~~-gH~~~~e~p~~----~~~~i~~fl 259 (260)
+++ ||.+++|+|+. +.+.|.+||
T Consensus 287 ~~~a~H~~~~e~pd~~~~~~~~~i~~fl 314 (330)
T PLN02298 287 YDGMMHSLLFGEPDENIEIVRRDILSWL 314 (330)
T ss_pred cCCcEeeeecCCCHHHHHHHHHHHHHHH
Confidence 985 89999999975 455666675
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=99.93 E-value=6.9e-25 Score=183.51 Aligned_cols=94 Identities=22% Similarity=0.278 Sum_probs=79.4
Q ss_pred cccccchHhhhccCC-CCCeEEEEcCCCCCCCCCCCC----CCccchhhHHHHHHHHHHHc----CCceEEEEEeChhHH
Q psy16156 2 QDNAASFDKLLPLLP-ARYYYVCIDLPGHGLSSHFPP----GMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGGQ 72 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~-~~y~vi~~Dl~GhG~S~~~~~----~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ 72 (260)
.++...|..++..|. .+|+|+++|+||||.|+...+ +..+++.++++|+.++++++ +..+++|+||||||.
T Consensus 64 ~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ 143 (330)
T PRK10749 64 IESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGA 143 (330)
T ss_pred cchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHH
Confidence 456678999987664 579999999999999975321 22357889999999999887 678999999999999
Q ss_pred HHHHHHHhCcchhhhHHhhcccC
Q psy16156 73 LGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 73 ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
||+.+|.++|++|+++|++++..
T Consensus 144 ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 144 ILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHhCCCCcceEEEECchh
Confidence 99999999999999999998653
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.92 E-value=9.7e-24 Score=174.90 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=73.1
Q ss_pred hhhccCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhH
Q psy16156 10 KLLPLLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRL 88 (260)
Q Consensus 10 ~~~~~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~l 88 (260)
.+...+. ++|+||++|+||||.|+.......+++.++++|+..+++++++++++++||||||++++.+|.++|++|+++
T Consensus 44 ~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~l 123 (306)
T TIGR01249 44 GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGL 123 (306)
T ss_pred HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhh
Confidence 3444453 579999999999999986322224678899999999999999999999999999999999999999999999
Q ss_pred HhhcccC
Q psy16156 89 ILLDAMN 95 (260)
Q Consensus 89 vlid~~~ 95 (260)
|++++..
T Consensus 124 vl~~~~~ 130 (306)
T TIGR01249 124 VLRGIFL 130 (306)
T ss_pred eeecccc
Confidence 9998653
No 39
>KOG2382|consensus
Probab=99.92 E-value=3.3e-24 Score=171.44 Aligned_cols=233 Identities=17% Similarity=0.228 Sum_probs=152.2
Q ss_pred ccccchHhhhccCCCC--CeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC----CceEEEEEeChhH-HHHH
Q psy16156 3 DNAASFDKLLPLLPAR--YYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA----WTKFIWLGHSLGG-QLGT 75 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~~--y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhSmGG-~ia~ 75 (260)
++...|+.+.-.|++. ..|+++|+|.||.|.+.. .++...+++|+..|++..+ ..+++|+|||||| .+++
T Consensus 63 GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m 139 (315)
T KOG2382|consen 63 GSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAM 139 (315)
T ss_pred cCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHH
Confidence 5678999999999864 699999999999998743 3456789999999999985 6799999999999 8888
Q ss_pred HHHHhCcchhhhHHhhcccC-CCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHH
Q psy16156 76 HYAAMFPQLMDRLILLDAMN-QRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAE 154 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
.++..+|+.+.++|++|..+ ..+...... ...+..+...... .....+..++.+.+... ..+....
T Consensus 140 ~~t~~~p~~~~rliv~D~sP~~~~~~~~e~----~e~i~~m~~~d~~----~~~~~~rke~~~~l~~~-----~~d~~~~ 206 (315)
T KOG2382|consen 140 AETLKKPDLIERLIVEDISPGGVGRSYGEY----RELIKAMIQLDLS----IGVSRGRKEALKSLIEV-----GFDNLVR 206 (315)
T ss_pred HHHHhcCcccceeEEEecCCccCCcccchH----HHHHHHHHhcccc----ccccccHHHHHHHHHHH-----hcchHHH
Confidence 99999999999999999443 222222111 1112111111110 00013444555555442 1122333
Q ss_pred HHHHhcceec--CCceEEeecccc-cccccc--CCCHHHHHHHH--HhccccEEEEEeCCCCcchhhcchhhHHHHhhhh
Q psy16156 155 ILFTRAVSAR--DGGFVFNFDQRL-KNKIYL--VMTEDQQHSII--RNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYS 227 (260)
Q Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~ 227 (260)
.++..++++. ++.+.+..+... ...... ... .+..+ .....|||++.|.++..++. +. ...++++
T Consensus 207 ~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s---~~~~l~~~~~~~pvlfi~g~~S~fv~~----~~-~~~~~~~ 278 (315)
T KOG2382|consen 207 QFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILS---YWADLEDGPYTGPVLFIKGLQSKFVPD----EH-YPRMEKI 278 (315)
T ss_pred HHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhc---ccccccccccccceeEEecCCCCCcCh----hH-HHHHHHh
Confidence 3444455522 222334433321 111111 111 12222 77889999999999987654 22 3356665
Q ss_pred CCCCcEEEEEc-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 228 RHPKFHVEMVD-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 228 ~~p~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
. |++++..++ +|||+|.|+|+.|.+.|.+|+.
T Consensus 279 f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 279 F-PNVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred c-cchheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 5 689999999 8999999999999999999974
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.92 E-value=2.6e-24 Score=193.18 Aligned_cols=92 Identities=20% Similarity=0.212 Sum_probs=77.4
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCce-EEEEEeChhHHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTK-FIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhSmGG~ia~~~a~ 79 (260)
|.+++..|+.+++.|+++|+|+++|+||||.|+..+....|++.++++|+.++++++++.+ ++|+||||||++++.++.
T Consensus 34 ~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~ 113 (582)
T PRK05855 34 YPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVT 113 (582)
T ss_pred CCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHh
Confidence 5677889999999998899999999999999986443346889999999999999999876 999999999999998887
Q ss_pred h--CcchhhhHHhhc
Q psy16156 80 M--FPQLMDRLILLD 92 (260)
Q Consensus 80 ~--~p~~v~~lvlid 92 (260)
+ +|+++.+++.++
T Consensus 114 ~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 114 RPRAAGRIASFTSVS 128 (582)
T ss_pred Cccchhhhhhheecc
Confidence 6 345555555544
No 41
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=5.2e-24 Score=168.73 Aligned_cols=215 Identities=19% Similarity=0.206 Sum_probs=124.9
Q ss_pred CeEEEEcCCCCCCCCC--CCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC-
Q psy16156 19 YYYVCIDLPGHGLSSH--FPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN- 95 (260)
Q Consensus 19 y~vi~~Dl~GhG~S~~--~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~- 95 (260)
|+||++|+||+|.|+. ......|+..++++++..++++++++++++|||||||.+++.+|+++|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 1233468899999999999999999999999999999999999999999999999998641
Q ss_pred -CCCcchhHHHH-HHHHHH-HHhHhHHHhhcCCCCCCCCHHHHHHHHH----h--ccccCC-CCHHHHHHHHHhcceecC
Q psy16156 96 -QRKTKVEDTLT-KVRDIL-TNQMNLEEKLNNRTQPVYTKEQVVSKLK----Q--RLLLNE-ISTESAEILFTRAVSARD 165 (260)
Q Consensus 96 -~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~-~~~~~~~~~~~~~~~~~~ 165 (260)
........... ...... ......... .......... . ...... ........+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSD---------PIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDA- 150 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHH-
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccc---------cchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHH-
Confidence 00000000000 000000 000000000 0000000000 0 000000 00000000000000000
Q ss_pred CceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCC
Q psy16156 166 GGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDME 244 (260)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~ 244 (260)
. ..... .........+....+..+++|+++++|++|...+. .... .+.+.. |+.+++.+++ ||+.+
T Consensus 151 ----~--~~~~~-~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~----~~~~-~~~~~~-~~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 151 ----F--DNMFW-NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPP----ESSE-QLAKLI-PNSQLVLIEGSGHFAF 217 (230)
T ss_dssp ----H--HHHHH-HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHH----HHHH-HHHHHS-TTEEEEEETTCCSTHH
T ss_pred ----H--hhhcc-ccccccccccccccccccCCCeEEEEeCCCCCCCH----HHHH-HHHHhc-CCCEEEECCCCChHHH
Confidence 0 00000 00011122334566789999999999999998775 2323 344443 6899999996 99999
Q ss_pred CCChHHHHHHHH
Q psy16156 245 LEEPEKLSGLIS 256 (260)
Q Consensus 245 ~e~p~~~~~~i~ 256 (260)
+|+|+++++.|.
T Consensus 218 ~~~~~~~~~~i~ 229 (230)
T PF00561_consen 218 LEGPDEFNEIII 229 (230)
T ss_dssp HHSHHHHHHHHH
T ss_pred hcCHHhhhhhhc
Confidence 999999999875
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=5.4e-23 Score=174.78 Aligned_cols=229 Identities=12% Similarity=0.143 Sum_probs=132.4
Q ss_pred CcccccchHhhhccCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC----ceEEEEEeChhHHHHH
Q psy16156 1 MQDNAASFDKLLPLLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW----TKFIWLGHSLGGQLGT 75 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhSmGG~ia~ 75 (260)
|.++...|..+++.|+ .+|+|+++|+||||.|+.. .+..++++.+++|+.++++.++. .+++|+||||||.+++
T Consensus 145 ~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~-~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial 223 (395)
T PLN02652 145 LNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGL-HGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVL 223 (395)
T ss_pred chHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-CCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHH
Confidence 4566778999999996 4799999999999999863 33345778889999999998753 3799999999999999
Q ss_pred HHHHhCcc---hhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHH
Q psy16156 76 HYAAMFPQ---LMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTES 152 (260)
Q Consensus 76 ~~a~~~p~---~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
.+|. +|+ +|+++|+.++........ .........+..+.. ...+..... ... ....+++.
T Consensus 224 ~~a~-~p~~~~~v~glVL~sP~l~~~~~~-~~~~~~~~l~~~~~p--------~~~~~~~~~------~~~-~~s~~~~~ 286 (395)
T PLN02652 224 KAAS-YPSIEDKLEGIVLTSPALRVKPAH-PIVGAVAPIFSLVAP--------RFQFKGANK------RGI-PVSRDPAA 286 (395)
T ss_pred HHHh-ccCcccccceEEEECcccccccch-HHHHHHHHHHHHhCC--------CCcccCccc------ccC-CcCCCHHH
Confidence 7764 664 899999987543211111 111111111000000 000000000 000 00000111
Q ss_pred HHHHHHhcceec-CCceEEeeccccccccccCC-CHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCC
Q psy16156 153 AEILFTRAVSAR-DGGFVFNFDQRLKNKIYLVM-TEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHP 230 (260)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p 230 (260)
..... .... ..++ . +.... .... ..++....+.+|++|+|+|+|++|.+++. +...+..+....+
T Consensus 287 ~~~~~---~dp~~~~g~-i----~~~~~-~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~----~~a~~l~~~~~~~ 353 (395)
T PLN02652 287 LLAKY---SDPLVYTGP-I----RVRTG-HEILRISSYLTRNFKSVTVPFMVLHGTADRVTDP----LASQDLYNEAASR 353 (395)
T ss_pred HHHHh---cCCCcccCC-c----hHHHH-HHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCH----HHHHHHHHhcCCC
Confidence 00000 0000 0010 0 00000 0000 01123455788999999999999998765 2333444443323
Q ss_pred CcEEEEEcC-CCCCCCC-ChHHHHHHHHhhhC
Q psy16156 231 KFHVEMVDS-GHDMELE-EPEKLSGLISDFLD 260 (260)
Q Consensus 231 ~~~~~~~~~-gH~~~~e-~p~~~~~~i~~fl~ 260 (260)
+.+++.+++ +|.++.| +|+++.+.|.+||.
T Consensus 354 ~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 354 HKDIKLYDGFLHDLLFEPEREEVGRDIIDWME 385 (395)
T ss_pred CceEEEECCCeEEeccCCCHHHHHHHHHHHHH
Confidence 568888985 8998776 89999999999983
No 43
>KOG2564|consensus
Probab=99.90 E-value=2e-23 Score=161.89 Aligned_cols=229 Identities=20% Similarity=0.254 Sum_probs=145.2
Q ss_pred ccccchHhhhccCCC--CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc---CCceEEEEEeChhHHHHHHH
Q psy16156 3 DNAASFDKLLPLLPA--RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF---AWTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~--~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhSmGG~ia~~~ 77 (260)
-++.+|..++..|.. +.+|+|+|+||||+|.-.+ ..+.+.+.++.|+.++++.+ ...+++||||||||.||.+.
T Consensus 85 ~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~-e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~ 163 (343)
T KOG2564|consen 85 SSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN-EDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHT 163 (343)
T ss_pred ccchhHHHHHHHHHhhcceeEEEeeccccCccccCC-hhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhh
Confidence 356789999998864 5799999999999997533 34688999999999999987 35689999999999999887
Q ss_pred HHh--CcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHH
Q psy16156 78 AAM--FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEI 155 (260)
Q Consensus 78 a~~--~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
|.. -|. +.+||+||..- ....+ .+..+..+|.++...+.+-+.++++-... ....+.+.++.
T Consensus 164 a~~k~lps-l~Gl~viDVVE--gtAme-----------AL~~m~~fL~~rP~~F~Si~~Ai~W~v~s--g~~Rn~~SArV 227 (343)
T KOG2564|consen 164 AASKTLPS-LAGLVVIDVVE--GTAME-----------ALNSMQHFLRNRPKSFKSIEDAIEWHVRS--GQLRNRDSARV 227 (343)
T ss_pred hhhhhchh-hhceEEEEEec--hHHHH-----------HHHHHHHHHhcCCccccchhhHHHHHhcc--ccccccccceE
Confidence 764 466 99999999653 11121 11122223233333455666676665553 11122222222
Q ss_pred HHHhcceecCCc--eEEeecccc-ccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCc
Q psy16156 156 LFTRAVSARDGG--FVFNFDQRL-KNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKF 232 (260)
Q Consensus 156 ~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~ 232 (260)
.+...+++..+| |.++.+..- .....+++. ..-+.+-..++|-++|.+..|..-. .. .+.++.. ..
T Consensus 228 smP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~--gLS~~Fl~~p~~klLilAg~d~LDk-----dL---tiGQMQG-k~ 296 (343)
T KOG2564|consen 228 SMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFK--GLSDKFLGLPVPKLLILAGVDRLDK-----DL---TIGQMQG-KF 296 (343)
T ss_pred ecchheeeccCCCcEEEEeeccccchhHHHHHh--hhhhHhhCCCccceeEEecccccCc-----ce---eeeeecc-ce
Confidence 223334444444 555544321 112223332 1223445677888888776665311 11 2233332 57
Q ss_pred EEEEEc-CCCCCCCCChHHHHHHHHhhh
Q psy16156 233 HVEMVD-SGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 233 ~~~~~~-~gH~~~~e~p~~~~~~i~~fl 259 (260)
++..++ +||++|.+.|..++..+..|+
T Consensus 297 Q~~vL~~~GH~v~ED~P~kva~~~~~f~ 324 (343)
T KOG2564|consen 297 QLQVLPLCGHFVHEDSPHKVAECLCVFW 324 (343)
T ss_pred eeeeecccCceeccCCcchHHHHHHHHH
Confidence 888887 799999999999999999886
No 44
>KOG2984|consensus
Probab=99.90 E-value=2.7e-23 Score=153.88 Aligned_cols=213 Identities=16% Similarity=0.145 Sum_probs=136.5
Q ss_pred cccchHhhhccCCC--CCeEEEEcCCCCCCCCCCCCCCccch---hhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 4 NAASFDKLLPLLPA--RYYYVCIDLPGHGLSSHFPPGMLLDW---LNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 4 ~~~~w~~~~~~L~~--~y~vi~~Dl~GhG~S~~~~~~~~~~~---~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
....|.+++..|-+ .++||++|-||||.|.++ + ..+.. ..=|++...++++|+.++|.++|+|=||..|+..|
T Consensus 55 ~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP-~-Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivA 132 (277)
T KOG2984|consen 55 YKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP-E-RKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVA 132 (277)
T ss_pred ccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC-c-ccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEee
Confidence 34567777666643 389999999999999863 2 23443 34477888999999999999999999999999999
Q ss_pred HhCcchhhhHHhhcccCCCCcchh-HHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHH
Q psy16156 79 AMFPQLMDRLILLDAMNQRKTKVE-DTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILF 157 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
+++++.|.++|+..+..... ..+ .....+++- .++...........|.++.+ ......| .+...++
T Consensus 133 ak~~e~v~rmiiwga~ayvn-~~~~ma~kgiRdv----~kWs~r~R~P~e~~Yg~e~f-~~~wa~w------vD~v~qf- 199 (277)
T KOG2984|consen 133 AKGKEKVNRMIIWGAAAYVN-HLGAMAFKGIRDV----NKWSARGRQPYEDHYGPETF-RTQWAAW------VDVVDQF- 199 (277)
T ss_pred ccChhhhhhheeecccceec-chhHHHHhchHHH----hhhhhhhcchHHHhcCHHHH-HHHHHHH------HHHHHHH-
Confidence 99999999999998665322 122 222233221 12211100000012333221 1111111 0001110
Q ss_pred HhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEE
Q psy16156 158 TRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV 237 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 237 (260)
.....+.+ .+..+.+++|||||++|..|+.+.. .. ...+.... +.+++.+.
T Consensus 200 -------------------~~~~dG~f----Cr~~lp~vkcPtli~hG~kDp~~~~----~h-v~fi~~~~-~~a~~~~~ 250 (277)
T KOG2984|consen 200 -------------------HSFCDGRF----CRLVLPQVKCPTLIMHGGKDPFCGD----PH-VCFIPVLK-SLAKVEIH 250 (277)
T ss_pred -------------------hhcCCCch----HhhhcccccCCeeEeeCCcCCCCCC----CC-ccchhhhc-ccceEEEc
Confidence 00001222 4557899999999999999986543 11 23444443 57888888
Q ss_pred c-CCCCCCCCChHHHHHHHHhhhC
Q psy16156 238 D-SGHDMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 238 ~-~gH~~~~e~p~~~~~~i~~fl~ 260 (260)
+ |+|.+|+--|++||..+++||+
T Consensus 251 peGkHn~hLrya~eFnklv~dFl~ 274 (277)
T KOG2984|consen 251 PEGKHNFHLRYAKEFNKLVLDFLK 274 (277)
T ss_pred cCCCcceeeechHHHHHHHHHHHh
Confidence 7 7899999999999999999985
No 45
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.90 E-value=2.3e-22 Score=170.31 Aligned_cols=90 Identities=17% Similarity=0.392 Sum_probs=74.0
Q ss_pred cchHhhhcc---CC-CCCeEEEEcCCCCCCCCCC-----------CC-C------C-ccchhhHHHHHHHHHHHcCCceE
Q psy16156 6 ASFDKLLPL---LP-ARYYYVCIDLPGHGLSSHF-----------PP-G------M-LLDWLNYLLACHRVVNHFAWTKF 62 (260)
Q Consensus 6 ~~w~~~~~~---L~-~~y~vi~~Dl~GhG~S~~~-----------~~-~------~-~~~~~~~a~dl~~~~~~l~~~~~ 62 (260)
+-|+.++.. |. ++|.||++|..|-|.|+.+ |. + . .+++.++++++.++++++|++++
T Consensus 83 gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~ 162 (389)
T PRK06765 83 GYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARL 162 (389)
T ss_pred ccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCc
Confidence 448877653 43 4799999999998864311 10 1 1 27899999999999999999999
Q ss_pred E-EEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 63 I-WLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 63 ~-lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+ +|||||||++|+.+|.+||++|+++|++++..
T Consensus 163 ~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 163 HAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred eEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 7 99999999999999999999999999998664
No 46
>PLN02511 hydrolase
Probab=99.89 E-value=9.8e-23 Score=173.62 Aligned_cols=84 Identities=18% Similarity=0.145 Sum_probs=66.6
Q ss_pred Hhhhc-cCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC----ceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 9 DKLLP-LLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW----TKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 9 ~~~~~-~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
..++. .++++|+|+++|+||||.|....+ .+....+++|+.+++++++. .++++|||||||.|++.|+.++|+
T Consensus 119 ~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~ 196 (388)
T PLN02511 119 RHMLLRARSKGWRVVVFNSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGE 196 (388)
T ss_pred HHHHHHHHHCCCEEEEEecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCC
Confidence 34444 456789999999999999975322 22235678899898888876 589999999999999999999999
Q ss_pred h--hhhHHhhccc
Q psy16156 84 L--MDRLILLDAM 94 (260)
Q Consensus 84 ~--v~~lvlid~~ 94 (260)
+ |.++|+++++
T Consensus 197 ~~~v~~~v~is~p 209 (388)
T PLN02511 197 NCPLSGAVSLCNP 209 (388)
T ss_pred CCCceEEEEECCC
Confidence 8 8888887643
No 47
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=2.4e-21 Score=158.82 Aligned_cols=94 Identities=27% Similarity=0.423 Sum_probs=80.4
Q ss_pred cccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC----ceEEEEEeChhHHHHHH
Q psy16156 2 QDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW----TKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhSmGG~ia~~ 76 (260)
.|++..|..++..|.. +|.|+++|+||||.|...+.+..-++.++.+|+.++++.... .+++|+||||||.||+.
T Consensus 44 ~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~ 123 (298)
T COG2267 44 GEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALL 123 (298)
T ss_pred hHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHH
Confidence 4678889999999975 699999999999999731334333588999999999998853 68999999999999999
Q ss_pred HHHhCcchhhhHHhhcccC
Q psy16156 77 YAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 77 ~a~~~p~~v~~lvlid~~~ 95 (260)
++.+++..|+++||.++..
T Consensus 124 ~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 124 YLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred HHHhCCccccEEEEECccc
Confidence 9999999999999987654
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.87 E-value=4e-21 Score=156.66 Aligned_cols=216 Identities=16% Similarity=0.142 Sum_probs=124.9
Q ss_pred ccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc-----CCceEEEEEeChhHHHHHHHH
Q psy16156 5 AASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF-----AWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 5 ~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l-----~~~~~~lvGhSmGG~ia~~~a 78 (260)
...|..+++.|++ +|+|+++|+||||+|+.. .+++.++.+|+.++++.+ +.++++++||||||.+++.+|
T Consensus 43 ~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 43 HRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred hhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHh
Confidence 3446778888875 699999999999999752 245567778888888776 567899999999999999998
Q ss_pred HhCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHH-HHHHH
Q psy16156 79 AMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTES-AEILF 157 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (260)
.. +++|+++|++++........ .....+.. ..... .+. .+..++. .+..+-.. ...+.
T Consensus 119 ~~-~~~v~~lil~~p~~~~~~~~--~~~~~~~~----~~~~~---------~~~-~~~~~~~----~g~~~~~~~~~~~~ 177 (274)
T TIGR03100 119 PA-DLRVAGLVLLNPWVRTEAAQ--AASRIRHY----YLGQL---------LSA-DFWRKLL----SGEVNLGSSLRGLG 177 (274)
T ss_pred hh-CCCccEEEEECCccCCcccc--hHHHHHHH----HHHHH---------hCh-HHHHHhc----CCCccHHHHHHHHH
Confidence 75 57899999998653211110 11111110 00000 000 1111111 11111110 11111
Q ss_pred HhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHH-----HHhhh-hCCCC
Q psy16156 158 TRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIG-----TYCLY-SRHPK 231 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~-----~~~~~-~~~p~ 231 (260)
.........+ .... ...+ ..+....+.++++|+++++|.+|..... ... +..+. ...|+
T Consensus 178 ~~~~~~~~~~-----~~~~----~~~~-~~~~~~~l~~~~~P~ll~~g~~D~~~~~-----~~~~~~~~~~~~~~l~~~~ 242 (274)
T TIGR03100 178 DALLKARQKG-----DEVA----HGGL-AERMKAGLERFQGPVLFILSGNDLTAQE-----FADSVLGEPAWRGALEDPG 242 (274)
T ss_pred HHHHhhhhcC-----CCcc----cchH-HHHHHHHHHhcCCcEEEEEcCcchhHHH-----HHHHhccChhhHHHhhcCC
Confidence 1000000000 0000 0111 2334567788899999999999985332 110 11222 22258
Q ss_pred cEEEEEc-CCCCCCCCC-hHHHHHHHHhhhC
Q psy16156 232 FHVEMVD-SGHDMELEE-PEKLSGLISDFLD 260 (260)
Q Consensus 232 ~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~ 260 (260)
++++.++ +||++..|+ ++++.+.|.+||+
T Consensus 243 v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 243 IERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred eEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 8999998 699995555 4999999999984
No 49
>KOG1455|consensus
Probab=99.86 E-value=2.5e-21 Score=152.74 Aligned_cols=229 Identities=14% Similarity=0.135 Sum_probs=135.8
Q ss_pred cccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC------CceEEEEEeChhHHHHHH
Q psy16156 4 NAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA------WTKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 4 ~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhSmGG~ia~~ 76 (260)
++.+|..++..|+. +|.|+++|++|||.|+.. ....-+++..++|+..+.+... -.+..|.||||||+|++.
T Consensus 67 ~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl-~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll 145 (313)
T KOG1455|consen 67 SSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL-HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALL 145 (313)
T ss_pred chhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC-cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHH
Confidence 34678888888875 699999999999999974 3333478899999999888532 247899999999999999
Q ss_pred HHHhCcchhhhHHhhcccCCCCcchh-HH-HHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHH
Q psy16156 77 YAAMFPQLMDRLILLDAMNQRKTKVE-DT-LTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAE 154 (260)
Q Consensus 77 ~a~~~p~~v~~lvlid~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
++.++|+...++|++.+.+......+ .. ...+...+..++...+. . .+.. .. .....+++.+
T Consensus 146 ~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~-----v--p~~d-~~--------~~~~kdp~~r 209 (313)
T KOG1455|consen 146 IALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKI-----V--PTKD-II--------DVAFKDPEKR 209 (313)
T ss_pred HHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceee-----c--CCcc-cc--------ccccCCHHHH
Confidence 99999999999999987775432211 11 11111111111100000 0 0000 00 0111122222
Q ss_pred HHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEE
Q psy16156 155 ILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHV 234 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~ 234 (260)
..... +...+.--+++...........+....+.++++|.++++|++|.+..+. ...+..+.....+.++
T Consensus 210 ~~~~~------npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~----~Sk~Lye~A~S~DKTl 279 (313)
T KOG1455|consen 210 KILRS------DPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPK----VSKELYEKASSSDKTL 279 (313)
T ss_pred HHhhc------CCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcH----HHHHHHHhccCCCCce
Confidence 11111 1111111123222211122223556778999999999999999976652 3334444433347789
Q ss_pred EEEcC-CCCCCC----CChHHHHHHHHhhh
Q psy16156 235 EMVDS-GHDMEL----EEPEKLSGLISDFL 259 (260)
Q Consensus 235 ~~~~~-gH~~~~----e~p~~~~~~i~~fl 259 (260)
+.+|| =|.++. |+-+.+...|.+||
T Consensus 280 KlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl 309 (313)
T KOG1455|consen 280 KLYPGMWHSLLSGEPDENVEIVFGDIISWL 309 (313)
T ss_pred eccccHHHHhhcCCCchhHHHHHHHHHHHH
Confidence 99998 588876 34445555566666
No 50
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.85 E-value=2.5e-20 Score=155.83 Aligned_cols=86 Identities=20% Similarity=0.318 Sum_probs=66.9
Q ss_pred HhhhccCC-CCCeEEEEcCCCCCCCCCCC--CCCccchhhHHHHHHHHHHHcC------------------------Cce
Q psy16156 9 DKLLPLLP-ARYYYVCIDLPGHGLSSHFP--PGMLLDWLNYLLACHRVVNHFA------------------------WTK 61 (260)
Q Consensus 9 ~~~~~~L~-~~y~vi~~Dl~GhG~S~~~~--~~~~~~~~~~a~dl~~~~~~l~------------------------~~~ 61 (260)
..++..|. .+|+|+++|+||||+|+... .+...++.++++|+.++++... -.+
T Consensus 64 ~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 143 (332)
T TIGR01607 64 DSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLP 143 (332)
T ss_pred HHHHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCc
Confidence 35678885 47999999999999998532 2222368899999999998642 247
Q ss_pred EEEEEeChhHHHHHHHHHhCcc--------hhhhHHhhccc
Q psy16156 62 FIWLGHSLGGQLGTHYAAMFPQ--------LMDRLILLDAM 94 (260)
Q Consensus 62 ~~lvGhSmGG~ia~~~a~~~p~--------~v~~lvlid~~ 94 (260)
++|+||||||.|++.++.++++ .++++|++++.
T Consensus 144 ~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 144 MYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred eeEeeccCccHHHHHHHHHhccccccccccccceEEEeccc
Confidence 9999999999999999987653 58888877654
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.83 E-value=1.5e-19 Score=154.91 Aligned_cols=198 Identities=14% Similarity=0.109 Sum_probs=120.7
Q ss_pred cchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc---CCceEEEEEeChhHHHHHHHHHhC
Q psy16156 6 ASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF---AWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 6 ~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
..|..+++.|++ +|.|+++|+||||.|...+. ..+......++.+.+... +.+++.++||||||++|+.+|..+
T Consensus 209 ~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~--~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~ 286 (414)
T PRK05077 209 DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL--TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE 286 (414)
T ss_pred hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc--cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC
Confidence 468888888876 59999999999999975321 233444455666666655 568999999999999999999999
Q ss_pred cchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhcc
Q psy16156 82 PQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAV 161 (260)
Q Consensus 82 p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++|+++|+++++.............+... ....+..... ....+.+.....+.
T Consensus 287 p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~--------------------~~~~la~~lg---~~~~~~~~l~~~l~--- 340 (414)
T PRK05077 287 PPRLKAVACLGPVVHTLLTDPKRQQQVPEM--------------------YLDVLASRLG---MHDASDEALRVELN--- 340 (414)
T ss_pred CcCceEEEEECCccchhhcchhhhhhchHH--------------------HHHHHHHHhC---CCCCChHHHHHHhh---
Confidence 999999999975531110011110000000 0000000000 01111111110000
Q ss_pred eecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcCCC
Q psy16156 162 SARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGH 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~gH 241 (260)
. + ....... ...++++|+|+|+|++|.+++. .. .+.+.... |+.+++.+++.
T Consensus 341 -~----~--------------sl~~~~~--l~~~i~~PvLiI~G~~D~ivP~----~~-a~~l~~~~-~~~~l~~i~~~- 392 (414)
T PRK05077 341 -R----Y--------------SLKVQGL--LGRRCPTPMLSGYWKNDPFSPE----ED-SRLIASSS-ADGKLLEIPFK- 392 (414)
T ss_pred -h----c--------------cchhhhh--hccCCCCcEEEEecCCCCCCCH----HH-HHHHHHhC-CCCeEEEccCC-
Confidence 0 0 0000000 1257999999999999998765 22 23444333 68899999865
Q ss_pred CCCCCChHHHHHHHHhhhC
Q psy16156 242 DMELEEPEKLSGLISDFLD 260 (260)
Q Consensus 242 ~~~~e~p~~~~~~i~~fl~ 260 (260)
++.|.++.+++.|.+||+
T Consensus 393 -~~~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 393 -PVYRNFDKALQEISDWLE 410 (414)
T ss_pred -CccCCHHHHHHHHHHHHH
Confidence 577899999999999984
No 52
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.80 E-value=1.6e-18 Score=130.74 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=130.4
Q ss_pred CcccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHH---cCCceEEEEEeChhHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH---FAWTKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~---l~~~~~~lvGhSmGG~ia~~ 76 (260)
++++.+..+.+..+|.+ +|+|++|-+||||..... -..++..++-+|+....++ .|.+++.++|-||||.+|+.
T Consensus 24 FTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~--fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alk 101 (243)
T COG1647 24 FTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED--FLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALK 101 (243)
T ss_pred cCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH--HhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHH
Confidence 35778888999999975 599999999999988531 1234556666665555544 46789999999999999999
Q ss_pred HHHhCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHH
Q psy16156 77 YAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEIL 156 (260)
Q Consensus 77 ~a~~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+|..+| ++++|.++++-- ...+......+..-+.+..+++ ..+.+.+-+.+... .........++
T Consensus 102 la~~~p--~K~iv~m~a~~~-~k~~~~iie~~l~y~~~~kk~e---------~k~~e~~~~e~~~~---~~~~~~~~~~~ 166 (243)
T COG1647 102 LAYHYP--PKKIVPMCAPVN-VKSWRIIIEGLLEYFRNAKKYE---------GKDQEQIDKEMKSY---KDTPMTTTAQL 166 (243)
T ss_pred HHhhCC--ccceeeecCCcc-cccchhhhHHHHHHHHHhhhcc---------CCCHHHHHHHHHHh---hcchHHHHHHH
Confidence 999999 999999975431 1122222222211111111111 11222222222211 00000000000
Q ss_pred HHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEE
Q psy16156 157 FTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (260)
... .++.+..+..|..||+++.|.+|..++.. +..++ .........++.+
T Consensus 167 ------------------------~~~--i~~~~~~~~~I~~pt~vvq~~~D~mv~~~-sA~~I---y~~v~s~~KeL~~ 216 (243)
T COG1647 167 ------------------------KKL--IKDARRSLDKIYSPTLVVQGRQDEMVPAE-SANFI---YDHVESDDKELKW 216 (243)
T ss_pred ------------------------HHH--HHHHHhhhhhcccchhheecccCCCCCHH-HHHHH---HHhccCCcceeEE
Confidence 000 12456678899999999999999977651 11122 2222212568889
Q ss_pred Ec-CCCCC-CCCChHHHHHHHHhhhC
Q psy16156 237 VD-SGHDM-ELEEPEKLSGLISDFLD 260 (260)
Q Consensus 237 ~~-~gH~~-~~e~p~~~~~~i~~fl~ 260 (260)
+. +||.+ +-++.+.+.+.|..||+
T Consensus 217 ~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 217 LEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred EccCCceeecchhHHHHHHHHHHHhh
Confidence 98 48987 56788999999999985
No 53
>PRK10985 putative hydrolase; Provisional
Probab=99.80 E-value=1.1e-18 Score=145.74 Aligned_cols=87 Identities=15% Similarity=0.084 Sum_probs=61.9
Q ss_pred hHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccc---hhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 8 FDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLD---WLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 8 w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~---~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
++.++..|.+ +|+|+++|+||||.|..... ..|. ..+....+..+.++++..++++|||||||.++..++..+++
T Consensus 76 ~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~ 154 (324)
T PRK10985 76 AHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD 154 (324)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC
Confidence 4557777764 69999999999998754211 1222 23333333444455677899999999999999999888765
Q ss_pred h--hhhHHhhcccC
Q psy16156 84 L--MDRLILLDAMN 95 (260)
Q Consensus 84 ~--v~~lvlid~~~ 95 (260)
. |.++|+++++.
T Consensus 155 ~~~~~~~v~i~~p~ 168 (324)
T PRK10985 155 DLPLDAAVIVSAPL 168 (324)
T ss_pred CCCccEEEEEcCCC
Confidence 4 88999987653
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.80 E-value=3.2e-19 Score=150.50 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=68.2
Q ss_pred chHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHH-----HHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 7 SFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYL-----LACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 7 ~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a-----~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
.|+.++..|.+ +|+|+++|++|+|.|+. .+++.+++ +.+..+.+..+.++++++||||||.+++.+++.
T Consensus 82 ~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~ 156 (350)
T TIGR01836 82 EDRSLVRGLLERGQDVYLIDWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAAL 156 (350)
T ss_pred CCchHHHHHHHCCCeEEEEeCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHh
Confidence 45778888875 59999999999998864 23444444 335556667788999999999999999999999
Q ss_pred CcchhhhHHhhcccC
Q psy16156 81 FPQLMDRLILLDAMN 95 (260)
Q Consensus 81 ~p~~v~~lvlid~~~ 95 (260)
+|++|+++|+++++.
T Consensus 157 ~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 157 YPDKIKNLVTMVTPV 171 (350)
T ss_pred CchheeeEEEecccc
Confidence 999999999998654
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=4.3e-18 Score=136.19 Aligned_cols=91 Identities=24% Similarity=0.436 Sum_probs=73.5
Q ss_pred CcccccchHhhhccCCC---CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPA---RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~---~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~ 77 (260)
|..+...|......+.. .|+|+++|+||||.|.. . .++...+++++..++++++.++++|+||||||.+++.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~-~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~ 105 (282)
T COG0596 30 FPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDP-A---GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALAL 105 (282)
T ss_pred CCCchhhhHHHHHHhhccccceEEEEecccCCCCCCc-c---cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHH
Confidence 34566777774333332 29999999999999971 1 23444559999999999999999999999999999999
Q ss_pred HHhCcchhhhHHhhcccC
Q psy16156 78 AAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 78 a~~~p~~v~~lvlid~~~ 95 (260)
+.++|++++++|++++..
T Consensus 106 ~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 106 ALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred HHhcchhhheeeEecCCC
Confidence 999999999999998653
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.77 E-value=3.6e-18 Score=148.87 Aligned_cols=86 Identities=14% Similarity=-0.045 Sum_probs=67.3
Q ss_pred hhhccCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHH---H-HHHHhC-cc
Q psy16156 10 KLLPLLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLG---T-HYAAMF-PQ 83 (260)
Q Consensus 10 ~~~~~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia---~-~~a~~~-p~ 83 (260)
.++..|. ++|+|+++|+||||.|.......+|..+.+.+++..+++.+|.+++++|||||||.++ + .+++.+ |+
T Consensus 211 Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~ 290 (532)
T TIGR01838 211 SLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDK 290 (532)
T ss_pred HHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCC
Confidence 4667776 4699999999999999753222245555677778888888999999999999999985 2 356665 88
Q ss_pred hhhhHHhhcccC
Q psy16156 84 LMDRLILLDAMN 95 (260)
Q Consensus 84 ~v~~lvlid~~~ 95 (260)
+|+++|++++..
T Consensus 291 rv~slvll~t~~ 302 (532)
T TIGR01838 291 RIKSATFFTTLL 302 (532)
T ss_pred ccceEEEEecCc
Confidence 999999998654
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.74 E-value=6.6e-17 Score=124.46 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=64.9
Q ss_pred CcccccchHh--hhccCCC---CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHH
Q psy16156 1 MQDNAASFDK--LLPLLPA---RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 1 ~~~~~~~w~~--~~~~L~~---~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~ 75 (260)
|..+..+|+. +.+.|++ +|+|+++|+|||| .++++++.++++++++++++||||||||++|+
T Consensus 10 f~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~ 76 (190)
T PRK11071 10 FNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYAT 76 (190)
T ss_pred CCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHH
Confidence 5677888884 4466643 6999999999985 25678999999999999999999999999999
Q ss_pred HHHHhCcchhhhHHhhccc
Q psy16156 76 HYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~ 94 (260)
.+|.++|. ++|+++++
T Consensus 77 ~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 77 WLSQCFML---PAVVVNPA 92 (190)
T ss_pred HHHHHcCC---CEEEECCC
Confidence 99999994 46778754
No 58
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.70 E-value=2.8e-16 Score=121.14 Aligned_cols=207 Identities=17% Similarity=0.195 Sum_probs=127.0
Q ss_pred ccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHH-HcCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVN-HFAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~-~l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
.++..|+.....|.....++++++||+|.--..+ ...++.++|+.+.+-+. -..-+++.+.||||||+||.++|.+.
T Consensus 18 Gsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 18 GSASLFRSWSRRLPADIELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred CCHHHHHHHHhhCCchhheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHH
Confidence 4677788888889888999999999999764422 34689999999888887 45557899999999999999999874
Q ss_pred cc---hhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHH-----
Q psy16156 82 PQ---LMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESA----- 153 (260)
Q Consensus 82 p~---~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 153 (260)
-. ....+.+..+..|....... ....+-.++++.+... +..+++..
T Consensus 96 ~~~g~~p~~lfisg~~aP~~~~~~~-----------------------i~~~~D~~~l~~l~~l---gG~p~e~led~El 149 (244)
T COG3208 96 ERAGLPPRALFISGCRAPHYDRGKQ-----------------------IHHLDDADFLADLVDL---GGTPPELLEDPEL 149 (244)
T ss_pred HHcCCCcceEEEecCCCCCCcccCC-----------------------ccCCCHHHHHHHHHHh---CCCChHHhcCHHH
Confidence 22 25666666544431110000 0011112233333321 12222211
Q ss_pred HHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcE
Q psy16156 154 EILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH 233 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (260)
..++-.-++. |.++.. .+. ...-..++||+.++.|++|..++. +......+... ..++
T Consensus 150 ~~l~LPilRA---------D~~~~e----~Y~----~~~~~pl~~pi~~~~G~~D~~vs~----~~~~~W~~~t~-~~f~ 207 (244)
T COG3208 150 MALFLPILRA---------DFRALE----SYR----YPPPAPLACPIHAFGGEKDHEVSR----DELGAWREHTK-GDFT 207 (244)
T ss_pred HHHHHHHHHH---------HHHHhc----ccc----cCCCCCcCcceEEeccCcchhccH----HHHHHHHHhhc-CCce
Confidence 1111110110 111000 000 001157899999999999997664 22222333333 3789
Q ss_pred EEEEcCCCCCCCCChHHHHHHHHhhh
Q psy16156 234 VEMVDSGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 234 ~~~~~~gH~~~~e~p~~~~~~i~~fl 259 (260)
+..++|||+...++.+++...|.+.+
T Consensus 208 l~~fdGgHFfl~~~~~~v~~~i~~~l 233 (244)
T COG3208 208 LRVFDGGHFFLNQQREEVLARLEQHL 233 (244)
T ss_pred EEEecCcceehhhhHHHHHHHHHHHh
Confidence 99999999999999999998888765
No 59
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.68 E-value=7.7e-17 Score=129.59 Aligned_cols=88 Identities=18% Similarity=0.138 Sum_probs=72.7
Q ss_pred ccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHH---HHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 5 AASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRV---VNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 5 ~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~---~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
...|..+++.|++ +|+|+++|+||||+|+.... .+++..+++|+.++ +++.+.++++|+||||||.+|+.+|.+
T Consensus 42 ~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 42 RRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA--AARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANP 119 (266)
T ss_pred hHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc--cCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHh
Confidence 3568888999974 69999999999999975322 34566777887664 455577899999999999999999999
Q ss_pred CcchhhhHHhhccc
Q psy16156 81 FPQLMDRLILLDAM 94 (260)
Q Consensus 81 ~p~~v~~lvlid~~ 94 (260)
+|++++++|++++.
T Consensus 120 ~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 120 LAAKCNRLVLWQPV 133 (266)
T ss_pred CccccceEEEeccc
Confidence 99999999999754
No 60
>PLN02872 triacylglycerol lipase
Probab=99.67 E-value=1.2e-15 Score=129.63 Aligned_cols=94 Identities=14% Similarity=0.130 Sum_probs=68.6
Q ss_pred cccccchH------hhhccCCC-CCeEEEEcCCCCCCCCC----CCCCC---ccchhhHH-HHHHHHHHHc---CCceEE
Q psy16156 2 QDNAASFD------KLLPLLPA-RYYYVCIDLPGHGLSSH----FPPGM---LLDWLNYL-LACHRVVNHF---AWTKFI 63 (260)
Q Consensus 2 ~~~~~~w~------~~~~~L~~-~y~vi~~Dl~GhG~S~~----~~~~~---~~~~~~~a-~dl~~~~~~l---~~~~~~ 63 (260)
..++..|. .++..|++ +|+|+++|+||+|.|.. .+... .+++.+++ .|+.++++.+ ..++++
T Consensus 84 ~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~ 163 (395)
T PLN02872 84 FMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIF 163 (395)
T ss_pred cccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceE
Confidence 34566774 23335655 69999999999886631 11111 36788888 7999999976 347999
Q ss_pred EEEeChhHHHHHHHHHhCcc---hhhhHHhhcccCC
Q psy16156 64 WLGHSLGGQLGTHYAAMFPQ---LMDRLILLDAMNQ 96 (260)
Q Consensus 64 lvGhSmGG~ia~~~a~~~p~---~v~~lvlid~~~~ 96 (260)
+|||||||.+++.++ .+|+ +|++++++++...
T Consensus 164 ~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 164 IVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred EEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 999999999998544 6787 6889999886653
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=99.65 E-value=3.5e-15 Score=120.95 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=60.6
Q ss_pred cccchHhhhccCCC-CCeEEEEcCCCC-CCCCCCCCCCccchhhHHHHHHH---HHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 4 NAASFDKLLPLLPA-RYYYVCIDLPGH-GLSSHFPPGMLLDWLNYLLACHR---VVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 4 ~~~~w~~~~~~L~~-~y~vi~~Dl~Gh-G~S~~~~~~~~~~~~~~a~dl~~---~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
+...+.+++..|++ +|.|+.+|.||| |+|+..-. .+++.....|+.+ +++..+.+++.|+||||||.+|+..|
T Consensus 49 ~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A 126 (307)
T PRK13604 49 RMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVI 126 (307)
T ss_pred ChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHh
Confidence 33447888999975 699999999998 99975221 1222223456644 44444667999999999999997777
Q ss_pred HhCcchhhhHHhhccc
Q psy16156 79 AMFPQLMDRLILLDAM 94 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~ 94 (260)
...+ ++.+|+..+.
T Consensus 127 ~~~~--v~~lI~~sp~ 140 (307)
T PRK13604 127 NEID--LSFLITAVGV 140 (307)
T ss_pred cCCC--CCEEEEcCCc
Confidence 6443 8887776443
No 62
>PRK10566 esterase; Provisional
Probab=99.64 E-value=3e-15 Score=120.41 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=59.8
Q ss_pred cccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccc-----hhhHHHHHHHHHHH------cCCceEEEEEeCh
Q psy16156 2 QDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLD-----WLNYLLACHRVVNH------FAWTKFIWLGHSL 69 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~-----~~~~a~dl~~~~~~------l~~~~~~lvGhSm 69 (260)
..+...|..++..|++ +|+|+++|+||||.|.........+ +..-.+|+.++++. .+.+++.++||||
T Consensus 37 ~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~ 116 (249)
T PRK10566 37 TSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASM 116 (249)
T ss_pred CcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecc
Confidence 4566678889999976 6999999999999874211111110 11123343333332 2347899999999
Q ss_pred hHHHHHHHHHhCcchhhhHHhh
Q psy16156 70 GGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 70 GG~ia~~~a~~~p~~v~~lvli 91 (260)
||.+++.++.++|+...+++++
T Consensus 117 Gg~~al~~~~~~~~~~~~~~~~ 138 (249)
T PRK10566 117 GGMTALGIMARHPWVKCVASLM 138 (249)
T ss_pred cHHHHHHHHHhCCCeeEEEEee
Confidence 9999999999998754444443
No 63
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.63 E-value=7.9e-16 Score=122.33 Aligned_cols=226 Identities=15% Similarity=0.140 Sum_probs=115.5
Q ss_pred hccCCCCCeEEEEcCCCCCCCCC-CCCCCcc-chhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHH
Q psy16156 12 LPLLPARYYYVCIDLPGHGLSSH-FPPGMLL-DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLI 89 (260)
Q Consensus 12 ~~~L~~~y~vi~~Dl~GhG~S~~-~~~~~~~-~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 89 (260)
+..+.++|-++-+|.|||..-.. .|++..| +++++|++|.+++++++++.++-+|--.||.|-.+||..||++|.+||
T Consensus 49 m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLi 128 (283)
T PF03096_consen 49 MQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLI 128 (283)
T ss_dssp HHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEE
Confidence 44566789999999999965432 3455444 689999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhcceecCCceE
Q psy16156 90 LLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFV 169 (260)
Q Consensus 90 lid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (260)
|+++.+..+ .+-+|.. ..+..+ .+.. ........+-.....+..- ......+..+.+ +..+.+....
T Consensus 129 Lvn~~~~~~-gw~Ew~~---~K~~~~-~L~~----~gmt~~~~d~Ll~h~Fg~~-~~~~n~Dlv~~y-r~~l~~~~Np-- 195 (283)
T PF03096_consen 129 LVNPTCTAA-GWMEWFY---QKLSSW-LLYS----YGMTSSVKDYLLWHYFGKE-EEENNSDLVQTY-RQHLDERINP-- 195 (283)
T ss_dssp EES---S----HHHHHH---HHHH------------CTTS-HHHHHHHHHS-HH-HHHCT-HHHHHH-HHHHHT-TTH--
T ss_pred EEecCCCCc-cHHHHHH---HHHhcc-cccc----cccccchHHhhhhcccccc-cccccHHHHHHH-HHHHhcCCCH--
Confidence 999665322 2222222 111100 0000 0000011111111111110 000122222222 1111111000
Q ss_pred EeeccccccccccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-CCCCCCCCCh
Q psy16156 170 FNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-SGHDMELEEP 248 (260)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~gH~~~~e~p 248 (260)
..+...+.....+.|.....+...||+|++.|+.++.... ..+...+..+...+++.++ +|-.+..|+|
T Consensus 196 ----~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~------vv~~ns~Ldp~~ttllkv~dcGglV~eEqP 265 (283)
T PF03096_consen 196 ----KNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDD------VVEMNSKLDPTKTTLLKVADCGGLVLEEQP 265 (283)
T ss_dssp ----HHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHH------HHHHHHHS-CCCEEEEEETT-TT-HHHH-H
T ss_pred ----HHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhh------HHHHHhhcCcccceEEEecccCCcccccCc
Confidence 0000011122222233333566779999999999985432 1223333332346778887 6999999999
Q ss_pred HHHHHHHHhhhC
Q psy16156 249 EKLSGLISDFLD 260 (260)
Q Consensus 249 ~~~~~~i~~fl~ 260 (260)
+.+++.++=||+
T Consensus 266 ~klaea~~lFlQ 277 (283)
T PF03096_consen 266 GKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999999988873
No 64
>KOG2931|consensus
Probab=99.63 E-value=1.9e-14 Score=113.17 Aligned_cols=84 Identities=19% Similarity=0.321 Sum_probs=71.9
Q ss_pred hccCCCCCeEEEEcCCCCCCC-CCCCCCCcc-chhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHH
Q psy16156 12 LPLLPARYYYVCIDLPGHGLS-SHFPPGMLL-DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLI 89 (260)
Q Consensus 12 ~~~L~~~y~vi~~Dl~GhG~S-~~~~~~~~~-~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 89 (260)
+..+.++|-|+.+|.|||=.- ...|.+..| +++++|++|..++++++++.++=+|---|++|-.+||..||++|.+||
T Consensus 72 m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 72 MAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred HHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEE
Confidence 444556799999999999443 234555455 689999999999999999999999999999999999999999999999
Q ss_pred hhcccC
Q psy16156 90 LLDAMN 95 (260)
Q Consensus 90 lid~~~ 95 (260)
||+..+
T Consensus 152 LIn~~~ 157 (326)
T KOG2931|consen 152 LINCDP 157 (326)
T ss_pred EEecCC
Confidence 999654
No 65
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.59 E-value=8.1e-15 Score=138.81 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=67.1
Q ss_pred CcccccchHhh-----hccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHH---cCCceEEEEEeChhH
Q psy16156 1 MQDNAASFDKL-----LPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH---FAWTKFIWLGHSLGG 71 (260)
Q Consensus 1 ~~~~~~~w~~~-----~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~---l~~~~~~lvGhSmGG 71 (260)
|..+...|+.+ ++.|.+ +|+|+++| +|.|+.......+++.+++..+.+.++. +..++++||||||||
T Consensus 76 ~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG 152 (994)
T PRK07868 76 MMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGG 152 (994)
T ss_pred CCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhH
Confidence 56677889876 788855 69999999 5777753222234566666555555543 345789999999999
Q ss_pred HHHHHHHHhC-cchhhhHHhhccc
Q psy16156 72 QLGTHYAAMF-PQLMDRLILLDAM 94 (260)
Q Consensus 72 ~ia~~~a~~~-p~~v~~lvlid~~ 94 (260)
.+++.+|+.+ |++|++||+++++
T Consensus 153 ~~a~~~aa~~~~~~v~~lvl~~~~ 176 (994)
T PRK07868 153 MFCYQAAAYRRSKDIASIVTFGSP 176 (994)
T ss_pred HHHHHHHHhcCCCccceEEEEecc
Confidence 9999998865 5689999998755
No 66
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.59 E-value=2.8e-15 Score=127.50 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=72.3
Q ss_pred Ccccc--cchHh-hhccCC---CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc------CCceEEEEEeC
Q psy16156 1 MQDNA--ASFDK-LLPLLP---ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF------AWTKFIWLGHS 68 (260)
Q Consensus 1 ~~~~~--~~w~~-~~~~L~---~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS 68 (260)
|.++. ..|.. ++..|. ++|+||++|+||||.|... ....+ ...+++++.++++.| ++++++|||||
T Consensus 50 ~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~-~a~~~-t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHS 127 (442)
T TIGR03230 50 WTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYP-TSAAY-TKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYS 127 (442)
T ss_pred CCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCc-ccccc-HHHHHHHHHHHHHHHHHhhCCCCCcEEEEEEC
Confidence 44443 35765 555442 3699999999999998653 22223 356677777777755 47899999999
Q ss_pred hhHHHHHHHHHhCcchhhhHHhhcccCCC
Q psy16156 69 LGGQLGTHYAAMFPQLMDRLILLDAMNQR 97 (260)
Q Consensus 69 mGG~ia~~~a~~~p~~v~~lvlid~~~~~ 97 (260)
|||.||..++.++|++|.++|++|++.|.
T Consensus 128 LGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 128 LGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred HHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 99999999999999999999999987653
No 67
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.8e-13 Score=111.61 Aligned_cols=90 Identities=19% Similarity=0.386 Sum_probs=70.8
Q ss_pred cchHhhhcc---CC-CCCeEEEEcCCCCCCC-CCC----CCCC-------ccchhhHHHHHHHHHHHcCCceEE-EEEeC
Q psy16156 6 ASFDKLLPL---LP-ARYYYVCIDLPGHGLS-SHF----PPGM-------LLDWLNYLLACHRVVNHFAWTKFI-WLGHS 68 (260)
Q Consensus 6 ~~w~~~~~~---L~-~~y~vi~~Dl~GhG~S-~~~----~~~~-------~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS 68 (260)
+-|+.++.. +. .+|.||++|..|.+.. +.+ +.+. .+++.+++..-+.++++||++++. +||-|
T Consensus 76 GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgS 155 (368)
T COG2021 76 GWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGS 155 (368)
T ss_pred ccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccC
Confidence 468777543 33 4699999999999743 221 1211 246678877778899999999977 99999
Q ss_pred hhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 69 LGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 69 mGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
||||-|+..|..|||+|+++|.+.+..
T Consensus 156 mGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 156 MGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred hHHHHHHHHHHhChHHHhhhheecccc
Confidence 999999999999999999999998654
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.53 E-value=9.9e-13 Score=103.68 Aligned_cols=94 Identities=21% Similarity=0.399 Sum_probs=82.1
Q ss_pred cccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCc-eEEEEEeChhHHHHHHHHH
Q psy16156 2 QDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWT-KFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhSmGG~ia~~~a~ 79 (260)
+++..+|+.+.+.|.+ +.|+|.+.+||+|.+++.+ +..|+-.+-..-+.++++.++++ +.+.+|||.|+-.|+.+|.
T Consensus 45 PGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~-~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~ 123 (297)
T PF06342_consen 45 PGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYP-DQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAV 123 (297)
T ss_pred CCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCc-ccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHh
Confidence 4677899999999986 5899999999999999844 45788777788889999999985 8999999999999999999
Q ss_pred hCcchhhhHHhhcccCCCC
Q psy16156 80 MFPQLMDRLILLDAMNQRK 98 (260)
Q Consensus 80 ~~p~~v~~lvlid~~~~~~ 98 (260)
.+| +.+++|+++++..+
T Consensus 124 ~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 124 THP--LHGLVLINPPGLRP 140 (297)
T ss_pred cCc--cceEEEecCCcccc
Confidence 997 78999999887543
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.48 E-value=5.8e-13 Score=104.66 Aligned_cols=87 Identities=18% Similarity=0.166 Sum_probs=56.9
Q ss_pred hHhhhccC-CCCCeEEEEcCCCCCCCCCC-----C-CCCccchhhHHHHHHHHHHHcC--CceEEEEEeChhHHHHHHHH
Q psy16156 8 FDKLLPLL-PARYYYVCIDLPGHGLSSHF-----P-PGMLLDWLNYLLACHRVVNHFA--WTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 8 w~~~~~~L-~~~y~vi~~Dl~GhG~S~~~-----~-~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhSmGG~ia~~~a 78 (260)
|......| +.+|.|+.+|.||.+..... . .....++.+..+-+..+++... .+++.|+|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44556667 56799999999999854321 0 0001223344444444444432 36899999999999999999
Q ss_pred HhCcchhhhHHhhccc
Q psy16156 79 AMFPQLMDRLILLDAM 94 (260)
Q Consensus 79 ~~~p~~v~~lvlid~~ 94 (260)
.++|++++++|..++.
T Consensus 83 ~~~~~~f~a~v~~~g~ 98 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGV 98 (213)
T ss_dssp HHTCCGSSEEEEESE-
T ss_pred cccceeeeeeecccee
Confidence 9999999998887654
No 70
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.48 E-value=1.7e-12 Score=103.12 Aligned_cols=90 Identities=22% Similarity=0.239 Sum_probs=74.4
Q ss_pred ccccchHhhhccCCCC-CeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCc-eEEEEEeChhHHHHHHHHHh
Q psy16156 3 DNAASFDKLLPLLPAR-YYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWT-KFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~~-y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhSmGG~ia~~~a~~ 80 (260)
+++..|..++..|.+. +.|++++.||++.... ...++.++|++..+-+.....+ +++|+|||+||.||+.+|.+
T Consensus 11 G~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 11 GSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp CSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHH
Confidence 5678899999999997 9999999999993332 2357888999887777776655 99999999999999999976
Q ss_pred ---CcchhhhHHhhcccCC
Q psy16156 81 ---FPQLMDRLILLDAMNQ 96 (260)
Q Consensus 81 ---~p~~v~~lvlid~~~~ 96 (260)
....|..|+++|++++
T Consensus 87 Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 87 LEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHTT-SESEEEEESCSST
T ss_pred HHHhhhccCceEEecCCCC
Confidence 4556999999997764
No 71
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.48 E-value=2e-13 Score=100.41 Aligned_cols=85 Identities=25% Similarity=0.331 Sum_probs=65.0
Q ss_pred CcccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
|..+...|..++..|++ +|.|+++|+||+|.+.. .....++.+++. .+..+.+++.|+||||||.+++.++.
T Consensus 8 ~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 8 WGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG-----ADAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp TTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH-----SHHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch-----hHHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhh
Confidence 34567778899998875 59999999999998843 112333343333 12237789999999999999999999
Q ss_pred hCcchhhhHHhhcc
Q psy16156 80 MFPQLMDRLILLDA 93 (260)
Q Consensus 80 ~~p~~v~~lvlid~ 93 (260)
++ .+|+++|++++
T Consensus 81 ~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 81 RN-PRVKAVVLLSP 93 (145)
T ss_dssp HS-TTESEEEEESE
T ss_pred hc-cceeEEEEecC
Confidence 88 88999998865
No 72
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.43 E-value=1.3e-13 Score=112.17 Aligned_cols=95 Identities=15% Similarity=0.177 Sum_probs=69.0
Q ss_pred Ccccc-cchHhhh-c-cCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc------CCceEEEEEeChh
Q psy16156 1 MQDNA-ASFDKLL-P-LLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF------AWTKFIWLGHSLG 70 (260)
Q Consensus 1 ~~~~~-~~w~~~~-~-~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhSmG 70 (260)
|.++. ..|...+ . .|. ++|+||++|++|++.+.. +. ...++...++++.++++.+ +.++++|||||||
T Consensus 45 ~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~~-a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlG 122 (275)
T cd00707 45 WTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY-PQ-AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLG 122 (275)
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh-HH-HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHH
Confidence 56666 6776544 3 344 469999999999854322 11 1234445556666665554 4579999999999
Q ss_pred HHHHHHHHHhCcchhhhHHhhcccCCC
Q psy16156 71 GQLGTHYAAMFPQLMDRLILLDAMNQR 97 (260)
Q Consensus 71 G~ia~~~a~~~p~~v~~lvlid~~~~~ 97 (260)
|.||..+|.++|++|.++|++|++.|.
T Consensus 123 a~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 123 AHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHhcCccceeEEecCCccc
Confidence 999999999999999999999987653
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.35 E-value=2.6e-11 Score=99.00 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=64.3
Q ss_pred cccccchHhh--hccCCC--CCeEEEEcC--CCCCCCCCC------------------CCCCccchhh-HHHHHHHHHHH
Q psy16156 2 QDNAASFDKL--LPLLPA--RYYYVCIDL--PGHGLSSHF------------------PPGMLLDWLN-YLLACHRVVNH 56 (260)
Q Consensus 2 ~~~~~~w~~~--~~~L~~--~y~vi~~Dl--~GhG~S~~~------------------~~~~~~~~~~-~a~dl~~~~~~ 56 (260)
..+...|... +..|+. +|.||+||. +|+|.|... +....+...+ +++++..++++
T Consensus 52 ~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~ 131 (275)
T TIGR02821 52 TCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA 131 (275)
T ss_pred CCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHh
Confidence 3455666432 233432 699999998 666544310 0011233343 46788888887
Q ss_pred ---cCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 57 ---FAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 57 ---l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
++.+++.|+||||||++|+.+|.++|+.+++++++++.
T Consensus 132 ~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 132 QFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred hCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 35578999999999999999999999999999988654
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.34 E-value=2.1e-11 Score=99.91 Aligned_cols=82 Identities=12% Similarity=0.036 Sum_probs=57.1
Q ss_pred ccCCC-CCeEEEEcCCCCC-----CCCC-------------CCCC----C--ccchhhHHHHHHHHHHHcCCceEEEEEe
Q psy16156 13 PLLPA-RYYYVCIDLPGHG-----LSSH-------------FPPG----M--LLDWLNYLLACHRVVNHFAWTKFIWLGH 67 (260)
Q Consensus 13 ~~L~~-~y~vi~~Dl~GhG-----~S~~-------------~~~~----~--~~~~~~~a~dl~~~~~~l~~~~~~lvGh 67 (260)
..++. ++.|+.||.+++| .+.. ..+. . .|-..++.+.+....+.++.++++|+||
T Consensus 71 ~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~ 150 (283)
T PLN02442 71 RAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGH 150 (283)
T ss_pred HHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 44443 6999999998887 2110 0000 0 1112344445555555668889999999
Q ss_pred ChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 68 SLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 68 SmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
||||..|+.+|.++|+++++++.+++.
T Consensus 151 S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 151 SMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred ChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 999999999999999999999888755
No 75
>KOG2565|consensus
Probab=99.30 E-value=6.6e-11 Score=96.16 Aligned_cols=91 Identities=21% Similarity=0.338 Sum_probs=80.6
Q ss_pred CcccccchHhhhccCCCC----------CeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChh
Q psy16156 1 MQDNAASFDKLLPLLPAR----------YYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLG 70 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~----------y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmG 70 (260)
|+++-..|-++||.|.+. |.||+|-+||+|-|+.. ....++..+.|.-+..+|=+||..++.|-|-.+|
T Consensus 161 wPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~-sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwG 239 (469)
T KOG2565|consen 161 WPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP-SKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWG 239 (469)
T ss_pred CCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC-ccCCccHHHHHHHHHHHHHHhCcceeEeecCchH
Confidence 788888889999999643 79999999999999974 3335777788999999999999999999999999
Q ss_pred HHHHHHHHHhCcchhhhHHhhc
Q psy16156 71 GQLGTHYAAMFPQLMDRLILLD 92 (260)
Q Consensus 71 G~ia~~~a~~~p~~v~~lvlid 92 (260)
..|+..+|..||+.|.++=+..
T Consensus 240 SiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 240 SIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred HHHHHHHHhhcchhhhHhhhcc
Confidence 9999999999999999987754
No 76
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.29 E-value=7.3e-12 Score=113.13 Aligned_cols=82 Identities=24% Similarity=0.261 Sum_probs=66.4
Q ss_pred CcccccchHhhhccCC-CCCeEEEEcCCCCCCCCCC---------CC-CCcc-----------chhhHHHHHHHHHHHcC
Q psy16156 1 MQDNAASFDKLLPLLP-ARYYYVCIDLPGHGLSSHF---------PP-GMLL-----------DWLNYLLACHRVVNHFA 58 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~-~~y~vi~~Dl~GhG~S~~~---------~~-~~~~-----------~~~~~a~dl~~~~~~l~ 58 (260)
|.++...|..+++.|+ .+|+||++|+||||+|... .. ...| .+.+++.|+..+...++
T Consensus 458 ~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~ 537 (792)
T TIGR03502 458 ITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLN 537 (792)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHh
Confidence 4577889999999997 5799999999999999442 11 1113 57899999999988887
Q ss_pred ----------------CceEEEEEeChhHHHHHHHHHhCc
Q psy16156 59 ----------------WTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 59 ----------------~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
..+++++||||||+|++.++....
T Consensus 538 ~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 538 GSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred cccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 358999999999999999997643
No 77
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.29 E-value=3.9e-12 Score=109.04 Aligned_cols=91 Identities=16% Similarity=0.140 Sum_probs=70.4
Q ss_pred cccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 4 ~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
....|..+++.|.+...+...|++|+|.+.+........+.++.+.++++.++.+.++++||||||||.+++.++..+|+
T Consensus 106 ~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred hHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCH
Confidence 45789999999987656779999999999763211122345666666777777788999999999999999999999998
Q ss_pred h----hhhHHhhccc
Q psy16156 84 L----MDRLILLDAM 94 (260)
Q Consensus 84 ~----v~~lvlid~~ 94 (260)
. |+++|.++++
T Consensus 186 ~~~k~I~~~I~la~P 200 (440)
T PLN02733 186 VFEKYVNSWIAIAAP 200 (440)
T ss_pred hHHhHhccEEEECCC
Confidence 6 5666677643
No 78
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.27 E-value=5.2e-11 Score=116.56 Aligned_cols=91 Identities=22% Similarity=0.094 Sum_probs=78.3
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC-ceEEEEEeChhHHHHHHHHH
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW-TKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhSmGG~ia~~~a~ 79 (260)
+..++..|..++..|+++++|+++|+||||.+.. ..+++.++++++.+.++.+.. .+++|+||||||.||.++|.
T Consensus 1077 ~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~ 1152 (1296)
T PRK10252 1077 ASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAA 1152 (1296)
T ss_pred CCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHH
Confidence 3457789999999999999999999999997642 247899999999999988764 48999999999999999998
Q ss_pred h---CcchhhhHHhhcccC
Q psy16156 80 M---FPQLMDRLILLDAMN 95 (260)
Q Consensus 80 ~---~p~~v~~lvlid~~~ 95 (260)
+ +|+++..++++++..
T Consensus 1153 ~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1153 RLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHcCCceeEEEEecCCC
Confidence 6 688999999998643
No 79
>KOG1552|consensus
Probab=99.26 E-value=1.7e-11 Score=95.47 Aligned_cols=73 Identities=22% Similarity=0.319 Sum_probs=53.7
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHH-HHcC-CceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 18 RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVV-NHFA-WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~-~~l~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
+++|+++|.+|+|.|+..|... .+.+-++.+-+.+ +..| .++++|+|+|||......+|.++| +.++||.++.
T Consensus 88 n~nv~~~DYSGyG~S~G~psE~--n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf 162 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPSER--NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPF 162 (258)
T ss_pred cceEEEEecccccccCCCcccc--cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccc
Confidence 6899999999999998755332 2221122222333 3343 689999999999999999999999 9999998543
No 80
>PRK11460 putative hydrolase; Provisional
Probab=99.21 E-value=1.1e-10 Score=92.75 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=56.5
Q ss_pred CcccccchHhhhccCCCC-CeEEEEcCCCCCCCCCCC-------CC--Ccc---chhh----HHHHHHHHHHHcCC--ce
Q psy16156 1 MQDNAASFDKLLPLLPAR-YYYVCIDLPGHGLSSHFP-------PG--MLL---DWLN----YLLACHRVVNHFAW--TK 61 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~-y~vi~~Dl~GhG~S~~~~-------~~--~~~---~~~~----~a~dl~~~~~~l~~--~~ 61 (260)
+.++...|..+++.|.+. +.+..++++|+..+...+ .+ ... ++.+ +.+.+..+.+++++ ++
T Consensus 25 ~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 104 (232)
T PRK11460 25 VGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQQQSGVGASA 104 (232)
T ss_pred CCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 457888899999999754 455566666654332100 00 000 1122 22233334445554 57
Q ss_pred EEEEEeChhHHHHHHHHHhCcchhhhHHhh
Q psy16156 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 62 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvli 91 (260)
++|+||||||.+|+.++.++|+.+.++|.+
T Consensus 105 i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~ 134 (232)
T PRK11460 105 TALIGFSQGAIMALEAVKAEPGLAGRVIAF 134 (232)
T ss_pred EEEEEECHHHHHHHHHHHhCCCcceEEEEe
Confidence 999999999999999999999876665543
No 81
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.21 E-value=1.8e-10 Score=100.27 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=62.8
Q ss_pred hhccC-CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc----CCceEEEEEeChhHHHHHH----HHHhC
Q psy16156 11 LLPLL-PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGGQLGTH----YAAMF 81 (260)
Q Consensus 11 ~~~~L-~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ia~~----~a~~~ 81 (260)
++.+| .++|+|+.+|.++-|.++. .+++++|++.+.+.++.. |-++++++||||||.++.. ||+++
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~~r-----~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~ 313 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKAHR-----EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG 313 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChhhc-----CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC
Confidence 34444 4679999999999876653 467788887766666655 6789999999999999997 88999
Q ss_pred cc-hhhhHHhhccc
Q psy16156 82 PQ-LMDRLILLDAM 94 (260)
Q Consensus 82 p~-~v~~lvlid~~ 94 (260)
++ +|++++++.++
T Consensus 314 ~~~~V~sltllatp 327 (560)
T TIGR01839 314 QLRKVNSLTYLVSL 327 (560)
T ss_pred CCCceeeEEeeecc
Confidence 96 89999988653
No 82
>KOG4391|consensus
Probab=99.16 E-value=3.4e-11 Score=91.01 Aligned_cols=76 Identities=20% Similarity=0.235 Sum_probs=56.8
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCccchhhHHH-HHHHHHHHc--CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 18 RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLL-ACHRVVNHF--AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~-dl~~~~~~l--~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
+..|..++.||+|+|+..|.....-++ ++ .+.-++++- ...+.+|.|-|+||+||..+|++..+++.++|+.+..
T Consensus 106 ~mnv~ivsYRGYG~S~GspsE~GL~lD--s~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF 183 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPSEEGLKLD--SEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTF 183 (300)
T ss_pred CceEEEEEeeccccCCCCccccceecc--HHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechh
Confidence 468999999999999876543332232 22 233344433 3468999999999999999999999999999998754
Q ss_pred C
Q psy16156 95 N 95 (260)
Q Consensus 95 ~ 95 (260)
.
T Consensus 184 ~ 184 (300)
T KOG4391|consen 184 L 184 (300)
T ss_pred c
Confidence 3
No 83
>PLN00021 chlorophyllase
Probab=99.15 E-value=4.5e-11 Score=98.81 Aligned_cols=92 Identities=17% Similarity=0.097 Sum_probs=63.0
Q ss_pred CcccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHH-------cCCceEEEEEeChhHH
Q psy16156 1 MQDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH-------FAWTKFIWLGHSLGGQ 72 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~-------l~~~~~~lvGhSmGG~ 72 (260)
|..+...|..++..|++ +|.|+++|++|++.+.. ... ..+..+..+.+.+.++. .+.+++.|+||||||.
T Consensus 61 ~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~-~~~-i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~ 138 (313)
T PLN00021 61 YLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG-TDE-IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGK 138 (313)
T ss_pred CCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc-hhh-HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchH
Confidence 45567789999999986 49999999999754322 110 01122223333332222 3457899999999999
Q ss_pred HHHHHHHhCcc-----hhhhHHhhccc
Q psy16156 73 LGTHYAAMFPQ-----LMDRLILLDAM 94 (260)
Q Consensus 73 ia~~~a~~~p~-----~v~~lvlid~~ 94 (260)
+|+.+|..+|+ +++++|++|+.
T Consensus 139 iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 139 TAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHHHhhccccccccceeeEEeeccc
Confidence 99999999885 56777877654
No 84
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.14 E-value=6.9e-10 Score=89.58 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=50.4
Q ss_pred hhccCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc----CCceEEEEEeChhH-HHHHHHHHhCcc-
Q psy16156 11 LLPLLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGG-QLGTHYAAMFPQ- 83 (260)
Q Consensus 11 ~~~~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG-~ia~~~a~~~p~- 83 (260)
++..+. ++|.|++++.||||.+....+. -|+.- ..+|+..+++.+ .-.++..||.|||| +++..++..--+
T Consensus 96 L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~-~yh~G-~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~ 173 (345)
T COG0429 96 LMRALSRRGWLVVVFHFRGCSGEANTSPR-LYHSG-ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDL 173 (345)
T ss_pred HHHHHHhcCCeEEEEecccccCCcccCcc-eeccc-chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCc
Confidence 455555 4699999999999999763322 23211 125555555544 45799999999999 666666655333
Q ss_pred hhhhHHhhc
Q psy16156 84 LMDRLILLD 92 (260)
Q Consensus 84 ~v~~lvlid 92 (260)
.+.+.+.++
T Consensus 174 ~~~aa~~vs 182 (345)
T COG0429 174 PLDAAVAVS 182 (345)
T ss_pred ccceeeeee
Confidence 344444443
No 85
>KOG4667|consensus
Probab=99.11 E-value=1.9e-09 Score=81.64 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=59.2
Q ss_pred hhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccc-hhhHHHHHHHHHHHcCC---ceEEEEEeChhHHHHHHHHHhCcch
Q psy16156 10 KLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLD-WLNYLLACHRVVNHFAW---TKFIWLGHSLGGQLGTHYAAMFPQL 84 (260)
Q Consensus 10 ~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~-~~~~a~dl~~~~~~l~~---~~~~lvGhSmGG~ia~~~a~~~p~~ 84 (260)
.++..|.+ ++.+.-+|.+|.|+|+.. ..|. ....|+||..++.++.- -=.+++|||-||-|++.||.++++
T Consensus 53 ~vA~~~e~~gis~fRfDF~GnGeS~gs---f~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d- 128 (269)
T KOG4667|consen 53 NVAKALEKEGISAFRFDFSGNGESEGS---FYYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD- 128 (269)
T ss_pred HHHHHHHhcCceEEEEEecCCCCcCCc---cccCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-
Confidence 45666664 699999999999999862 1222 23557999999998843 346899999999999999999988
Q ss_pred hhhHHhh
Q psy16156 85 MDRLILL 91 (260)
Q Consensus 85 v~~lvli 91 (260)
++-+|.+
T Consensus 129 ~~~viNc 135 (269)
T KOG4667|consen 129 IRNVINC 135 (269)
T ss_pred chheEEc
Confidence 5544443
No 86
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.06 E-value=1.3e-10 Score=103.86 Aligned_cols=77 Identities=19% Similarity=0.066 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC-----CceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 16 PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA-----WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 16 ~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
+.+|.|+++|+||||.|+... ..++ ...++|+.++++.+. ..++.++||||||.+++.+|..+|++++++|.
T Consensus 51 ~~Gy~vv~~D~RG~g~S~g~~--~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~ 127 (550)
T TIGR00976 51 AQGYAVVIQDTRGRGASEGEF--DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAP 127 (550)
T ss_pred hCCcEEEEEeccccccCCCce--EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEee
Confidence 467999999999999998632 1232 456677777777653 25899999999999999999999999999998
Q ss_pred hcccC
Q psy16156 91 LDAMN 95 (260)
Q Consensus 91 id~~~ 95 (260)
.++..
T Consensus 128 ~~~~~ 132 (550)
T TIGR00976 128 QEGVW 132 (550)
T ss_pred cCccc
Confidence 87543
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.02 E-value=1.2e-08 Score=85.10 Aligned_cols=90 Identities=16% Similarity=0.220 Sum_probs=62.9
Q ss_pred ccccchHhhhccCCC--CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHH
Q psy16156 3 DNAASFDKLLPLLPA--RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~--~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a 78 (260)
++..+|+.++..|++ ++.|+++|.|.-.+... |.. ..+..+..+.+.+..+.+++ ++++|+|+|+||.+|+.++
T Consensus 95 g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~-p~~-~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a 172 (318)
T PRK10162 95 GNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF-PQA-IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASA 172 (318)
T ss_pred CCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC-CCc-HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHH
Confidence 455678888888874 69999999996554321 211 12233444455555566775 5899999999999999998
Q ss_pred HhC------cchhhhHHhhccc
Q psy16156 79 AMF------PQLMDRLILLDAM 94 (260)
Q Consensus 79 ~~~------p~~v~~lvlid~~ 94 (260)
.+. +.++.++|++.+.
T Consensus 173 ~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 173 LWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred HHHHhcCCCccChhheEEECCc
Confidence 763 3678888888654
No 88
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.97 E-value=3.7e-09 Score=89.47 Aligned_cols=83 Identities=8% Similarity=-0.026 Sum_probs=66.3
Q ss_pred hhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhC-----cch
Q psy16156 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMF-----PQL 84 (260)
Q Consensus 10 ~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~-----p~~ 84 (260)
.++..|-+++.|+.+|..--+.... .. ..+++++|++-|.++++++|-+ ++|+|+|+||..++.+++.+ |++
T Consensus 121 S~V~~Ll~g~dVYl~DW~~p~~vp~-~~-~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~ 197 (406)
T TIGR01849 121 STVEALLPDHDVYITDWVNARMVPL-SA-GKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQ 197 (406)
T ss_pred HHHHHHhCCCcEEEEeCCCCCCCch-hc-CCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCC
Confidence 3455554589999999988775542 12 2588999999999999999877 99999999999988777665 778
Q ss_pred hhhHHhhcccC
Q psy16156 85 MDRLILLDAMN 95 (260)
Q Consensus 85 v~~lvlid~~~ 95 (260)
++++|++.++.
T Consensus 198 ~~sltlm~~PI 208 (406)
T TIGR01849 198 PRSMTLMGGPI 208 (406)
T ss_pred cceEEEEecCc
Confidence 99999987543
No 89
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.94 E-value=3.7e-09 Score=82.31 Aligned_cols=88 Identities=24% Similarity=0.288 Sum_probs=68.4
Q ss_pred cccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHH-HHHcCCceEEEEEeChhHHHHHHHHHh--
Q psy16156 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRV-VNHFAWTKFIWLGHSLGGQLGTHYAAM-- 80 (260)
Q Consensus 4 ~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~-~~~l~~~~~~lvGhSmGG~ia~~~a~~-- 80 (260)
+...|..+...|.+.++|+++|++|+|.+.... .++..++++.... .+..+..+++++||||||.++...|.+
T Consensus 11 ~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~ 86 (212)
T smart00824 11 GPHEYARLAAALRGRRDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLE 86 (212)
T ss_pred cHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHH
Confidence 455699999999988999999999999776522 3455666654443 344456789999999999999999886
Q ss_pred -CcchhhhHHhhcccC
Q psy16156 81 -FPQLMDRLILLDAMN 95 (260)
Q Consensus 81 -~p~~v~~lvlid~~~ 95 (260)
.++.+.+++++++..
T Consensus 87 ~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 87 ARGIPPAAVVLLDTYP 102 (212)
T ss_pred hCCCCCcEEEEEccCC
Confidence 567799999998654
No 90
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.92 E-value=2.6e-09 Score=83.87 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCCCCCCCCC----CC----CccchhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhCcchhh
Q psy16156 17 ARYYYVCIDLPGHGLSSHFP----PG----MLLDWLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQLMD 86 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~----~~----~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~v~ 86 (260)
.+|.|++||.||+|.+.... .. ......++.+-+..+.+..++ +++.|+||||||.+++.+|.++|+.+.
T Consensus 42 ~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 121 (212)
T TIGR01840 42 YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFA 121 (212)
T ss_pred CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhhe
Confidence 36999999999998654210 00 001112222223333334444 589999999999999999999999999
Q ss_pred hHHhhcccC
Q psy16156 87 RLILLDAMN 95 (260)
Q Consensus 87 ~lvlid~~~ 95 (260)
+++.+++..
T Consensus 122 ~~~~~~g~~ 130 (212)
T TIGR01840 122 GGASNAGLP 130 (212)
T ss_pred EEEeecCCc
Confidence 998887554
No 91
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.87 E-value=5.2e-08 Score=89.74 Aligned_cols=76 Identities=20% Similarity=0.125 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHH---HHHHHHHc-----------------CCceEEEEEeChhHHHHH
Q psy16156 16 PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA---CHRVVNHF-----------------AWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 16 ~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~d---l~~~~~~l-----------------~~~~~~lvGhSmGG~ia~ 75 (260)
+.+|.|+..|.||.|.|+.... .++. +-.+| +++++... .-.++-++|.|+||.+++
T Consensus 277 ~rGYaVV~~D~RGtg~SeG~~~--~~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~ 353 (767)
T PRK05371 277 PRGFAVVYVSGIGTRGSDGCPT--TGDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPN 353 (767)
T ss_pred hCCeEEEEEcCCCCCCCCCcCc--cCCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHH
Confidence 4579999999999999987321 2221 22334 34444421 036999999999999999
Q ss_pred HHHHhCcchhhhHHhhccc
Q psy16156 76 HYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~ 94 (260)
..|...|+.++.+|.+.+.
T Consensus 354 ~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 354 AVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHhhCCCcceEEEeeCCC
Confidence 9999999999999986543
No 92
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.86 E-value=9.3e-09 Score=93.08 Aligned_cols=84 Identities=18% Similarity=0.199 Sum_probs=53.8
Q ss_pred chHhhhccCC-CCCeEEEEcCCCC---CCCCC--CC-CCCccchhhHHHHHHHHHHHcCC---ceEEEEEeChhHHHHHH
Q psy16156 7 SFDKLLPLLP-ARYYYVCIDLPGH---GLSSH--FP-PGMLLDWLNYLLACHRVVNHFAW---TKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 7 ~w~~~~~~L~-~~y~vi~~Dl~Gh---G~S~~--~~-~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhSmGG~ia~~ 76 (260)
.|...+..|+ .+|-|+.++.||- |+.-. .. +....+..++.+.+. ++...+. +++.|.|||.||+.++.
T Consensus 411 ~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~ 489 (620)
T COG1506 411 SFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLL 489 (620)
T ss_pred ccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHH
Confidence 3444444454 5799999999955 43311 00 101124555555555 5555553 48999999999999999
Q ss_pred HHHhCcchhhhHHhhc
Q psy16156 77 YAAMFPQLMDRLILLD 92 (260)
Q Consensus 77 ~a~~~p~~v~~lvlid 92 (260)
.+.+.| ++++.+...
T Consensus 490 ~~~~~~-~f~a~~~~~ 504 (620)
T COG1506 490 AATKTP-RFKAAVAVA 504 (620)
T ss_pred HHhcCc-hhheEEecc
Confidence 999998 666665543
No 93
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.85 E-value=2.5e-08 Score=83.91 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=58.3
Q ss_pred chHhhhccCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc---CCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 7 SFDKLLPLLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF---AWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 7 ~w~~~~~~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
.|....++|. .++.++++|+||-|.|.+.+-..+++ .+-..|...+... +-.++.++|-||||++|.++|..++
T Consensus 206 ~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~--~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~ 283 (411)
T PF06500_consen 206 LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSS--RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED 283 (411)
T ss_dssp GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CC--HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHH--HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc
Confidence 3555567775 57999999999999997643222233 3334444444444 3469999999999999999999999
Q ss_pred chhhhHHhhcccC
Q psy16156 83 QLMDRLILLDAMN 95 (260)
Q Consensus 83 ~~v~~lvlid~~~ 95 (260)
+||+++|..+++.
T Consensus 284 ~RlkavV~~Ga~v 296 (411)
T PF06500_consen 284 PRLKAVVALGAPV 296 (411)
T ss_dssp TT-SEEEEES---
T ss_pred cceeeEeeeCchH
Confidence 9999999987653
No 94
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.85 E-value=2.9e-09 Score=69.44 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=44.0
Q ss_pred cccccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q psy16156 2 QDNAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVN 55 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~ 55 (260)
.+++..|..++..|++ +|.|+++|+||||+|+. ..+..-+++++++|+..+++
T Consensus 26 ~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g-~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 26 GEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEG-KRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCC-cccccCCHHHHHHHHHHHhC
Confidence 5678899999999986 59999999999999986 33333468899999998874
No 95
>KOG1838|consensus
Probab=98.82 E-value=4.1e-08 Score=82.17 Aligned_cols=68 Identities=25% Similarity=0.307 Sum_probs=48.0
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc----CCceEEEEEeChhHHHHHHHHHhCcch
Q psy16156 15 LPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGGQLGTHYAAMFPQL 84 (260)
Q Consensus 15 L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ia~~~a~~~p~~ 84 (260)
..++|+|+++..||+|.|.-..+. .|+ ....+|+.++++++ -..+..-||.||||+|-..|...-.+.
T Consensus 151 ~~~G~r~VVfN~RG~~g~~LtTpr-~f~-ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~ 222 (409)
T KOG1838|consen 151 QRKGYRVVVFNHRGLGGSKLTTPR-LFT-AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDN 222 (409)
T ss_pred HhCCcEEEEECCCCCCCCccCCCc-eee-cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCC
Confidence 345799999999999999753322 232 12235555555544 456899999999999999998875443
No 96
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=1.9e-08 Score=80.18 Aligned_cols=89 Identities=22% Similarity=0.266 Sum_probs=72.1
Q ss_pred cccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC-CceEEEEEeChhHHHHHHHHHh--
Q psy16156 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA-WTKFIWLGHSLGGQLGTHYAAM-- 80 (260)
Q Consensus 4 ~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhSmGG~ia~~~a~~-- 80 (260)
....|..++..|.+...|+.++.||+|.-.. + .-+++++++...+.|.+.. -.+++|+|||+||.||+..|.+
T Consensus 12 ~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~-~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~ 87 (257)
T COG3319 12 SVLAYAPLAAALGPLLPVYGLQAPGYGAGEQ-P---FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLE 87 (257)
T ss_pred cHHHHHHHHHHhccCceeeccccCccccccc-c---cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHH
Confidence 3456888999999889999999999986433 1 2357788887666666665 4699999999999999999976
Q ss_pred -CcchhhhHHhhcccCC
Q psy16156 81 -FPQLMDRLILLDAMNQ 96 (260)
Q Consensus 81 -~p~~v~~lvlid~~~~ 96 (260)
..+.|..|+++|++.+
T Consensus 88 ~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 88 AQGEEVAFLGLLDAVPP 104 (257)
T ss_pred hCCCeEEEEEEeccCCC
Confidence 5678999999998764
No 97
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.73 E-value=1.2e-08 Score=84.98 Aligned_cols=80 Identities=16% Similarity=0.027 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcch-hhhHHhhcc
Q psy16156 15 LPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQL-MDRLILLDA 93 (260)
Q Consensus 15 L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~-v~~lvlid~ 93 (260)
+.++..|..+|.++=..+.......+|=.+.+.+.+..+.+..|.++++++||++||++...+++.+|.+ |++++++-+
T Consensus 136 ~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts 215 (445)
T COG3243 136 LEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTS 215 (445)
T ss_pred HHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeec
Confidence 3467899999999887776421111232234445667777788889999999999999999999999988 999999754
Q ss_pred c
Q psy16156 94 M 94 (260)
Q Consensus 94 ~ 94 (260)
+
T Consensus 216 ~ 216 (445)
T COG3243 216 P 216 (445)
T ss_pred c
Confidence 3
No 98
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.71 E-value=3.9e-08 Score=79.73 Aligned_cols=83 Identities=22% Similarity=0.316 Sum_probs=65.0
Q ss_pred hhccCCCCCeEEEEcCCCCCCCCCCC----CCCccchhhHHHHHHHHHHHcC------CceEEEEEeChhHHHHHHHHHh
Q psy16156 11 LLPLLPARYYYVCIDLPGHGLSSHFP----PGMLLDWLNYLLACHRVVNHFA------WTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 11 ~~~~L~~~y~vi~~Dl~GhG~S~~~~----~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+...|..+|.|+++.+.||-.++..+ ++..|++++.++--.++++++- -.+++|+|||+|++|++++..+
T Consensus 25 L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r 104 (266)
T PF10230_consen 25 LYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKR 104 (266)
T ss_pred HHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHh
Confidence 33444568999999999998887631 3446888888777666666553 3579999999999999999999
Q ss_pred Cc---chhhhHHhhcc
Q psy16156 81 FP---QLMDRLILLDA 93 (260)
Q Consensus 81 ~p---~~v~~lvlid~ 93 (260)
.| .+|.+++++=+
T Consensus 105 ~~~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 105 LPDLKFRVKKVILLFP 120 (266)
T ss_pred ccccCCceeEEEEeCC
Confidence 99 78999888743
No 99
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.70 E-value=5.9e-07 Score=74.61 Aligned_cols=87 Identities=24% Similarity=0.255 Sum_probs=52.4
Q ss_pred ccchHhhhccCCCCCeEEEEcCCCCC-CCCCCC-------CC----------CccchhhHHHHHHHHHHHc------CCc
Q psy16156 5 AASFDKLLPLLPARYYYVCIDLPGHG-LSSHFP-------PG----------MLLDWLNYLLACHRVVNHF------AWT 60 (260)
Q Consensus 5 ~~~w~~~~~~L~~~y~vi~~Dl~GhG-~S~~~~-------~~----------~~~~~~~~a~dl~~~~~~l------~~~ 60 (260)
...|...+..-+.+|-|+++|.||.| .|.... .+ ..+-+..+..|+...++.+ +-+
T Consensus 96 ~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~ 175 (320)
T PF05448_consen 96 SGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGK 175 (320)
T ss_dssp GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEE
T ss_pred CCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcc
Confidence 44566666655578999999999999 342210 01 0111222344544444433 236
Q ss_pred eEEEEEeChhHHHHHHHHHhCcchhhhHHhhc
Q psy16156 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD 92 (260)
Q Consensus 61 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid 92 (260)
++.+.|.|.||.+++..|+..| +|++++..-
T Consensus 176 rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 176 RIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp EEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred eEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 8999999999999999999986 588777664
No 100
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.66 E-value=5.4e-07 Score=68.81 Aligned_cols=50 Identities=16% Similarity=0.273 Sum_probs=41.3
Q ss_pred hhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 43 WLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
.....+.+.++++..+.+.+.|||.||||+.|..+|.+++ +++ ||++++.
T Consensus 42 p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 42 PEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 4466678889999988778999999999999999999996 444 7887653
No 101
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.64 E-value=9.3e-08 Score=73.40 Aligned_cols=85 Identities=15% Similarity=0.257 Sum_probs=55.2
Q ss_pred cchHhhhccCCC-CCeEEEEcCCCCCCCCCCC-CCCccchhhHHH-HHHHHHHHc----CCceEEEEEeChhHHHHHHHH
Q psy16156 6 ASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFP-PGMLLDWLNYLL-ACHRVVNHF----AWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 6 ~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~-~~~~~~~~~~a~-dl~~~~~~l----~~~~~~lvGhSmGG~ia~~~a 78 (260)
..+++++..+++ +|.|.+.|+||-|.|+... .+..+.+.+++. |+-+.++.+ .--+-..|||||||.+.-.+
T Consensus 44 ~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~- 122 (281)
T COG4757 44 YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLL- 122 (281)
T ss_pred hHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccc-
Confidence 346677777764 6999999999999998521 233466555554 554444444 44578999999999865543
Q ss_pred HhCcchhhhHHhhc
Q psy16156 79 AMFPQLMDRLILLD 92 (260)
Q Consensus 79 ~~~p~~v~~lvlid 92 (260)
..+| ++....+..
T Consensus 123 ~~~~-k~~a~~vfG 135 (281)
T COG4757 123 GQHP-KYAAFAVFG 135 (281)
T ss_pred ccCc-ccceeeEec
Confidence 3445 444444443
No 102
>COG0400 Predicted esterase [General function prediction only]
Probab=98.63 E-value=4.1e-07 Score=70.41 Aligned_cols=123 Identities=16% Similarity=0.204 Sum_probs=85.9
Q ss_pred hhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHH
Q psy16156 43 WLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEE 120 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (260)
...+++-++...++.++ ++++++|.|-||+||+....++|+.++++|++.+..+....
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------------------- 139 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------------------- 139 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc--------------------
Confidence 33455566777777787 79999999999999999999999999999998765421100
Q ss_pred hhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHHHhcceecCCceEEeeccccccccccCCCHHHHHHHHHhccccE
Q psy16156 121 KLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQT 200 (260)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 200 (260)
. . + ..-..|+
T Consensus 140 ---------------------~--~----------------------------~-------------------~~~~~pi 149 (207)
T COG0400 140 ---------------------L--L----------------------------P-------------------DLAGTPI 149 (207)
T ss_pred ---------------------c--c----------------------------c-------------------ccCCCeE
Confidence 0 0 0 0112599
Q ss_pred EEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcCCCCCCCCChHHHHHHHHh
Q psy16156 201 LCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGHDMELEEPEKLSGLISD 257 (260)
Q Consensus 201 l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~gH~~~~e~p~~~~~~i~~ 257 (260)
++++|..|++++..... ...+.++... .+++..++++||.+..|.-+...+-+.+
T Consensus 150 ll~hG~~Dpvvp~~~~~-~l~~~l~~~g-~~v~~~~~~~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 150 LLSHGTEDPVVPLALAE-ALAEYLTASG-ADVEVRWHEGGHEIPPEELEAARSWLAN 204 (207)
T ss_pred EEeccCcCCccCHHHHH-HHHHHHHHcC-CCEEEEEecCCCcCCHHHHHHHHHHHHh
Confidence 99999999987763222 2244555544 3678888889999988776666554443
No 103
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.60 E-value=1.1e-06 Score=69.14 Aligned_cols=89 Identities=24% Similarity=0.281 Sum_probs=59.2
Q ss_pred cccccchHhhhccCCCCCeEEEEcCCCCCCCCC----CCCC---------------CccchhhHHHHHHHHHHHc-----
Q psy16156 2 QDNAASFDKLLPLLPARYYYVCIDLPGHGLSSH----FPPG---------------MLLDWLNYLLACHRVVNHF----- 57 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~----~~~~---------------~~~~~~~~a~dl~~~~~~l----- 57 (260)
..+.+.|......=+.+|-|+.+|.||-|.|+. .+.+ .+|=......|+..+++.+
T Consensus 93 ~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~ 172 (321)
T COG3458 93 GGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDE 172 (321)
T ss_pred cCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCc
Confidence 345567777776666789999999999998842 1211 1111112233433333332
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhh
Q psy16156 58 -AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 58 -~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvli 91 (260)
.-+++.+.|.|.||.||+..|+..| +|++++.+
T Consensus 173 vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 173 VDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred cchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 3478999999999999998888764 77877765
No 104
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.59 E-value=9.3e-07 Score=66.13 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=47.5
Q ss_pred ccCC-CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhCcch
Q psy16156 13 PLLP-ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQL 84 (260)
Q Consensus 13 ~~L~-~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~ 84 (260)
..|. .+|.|+-+|+||-|+|+..-+...-+.++.. .+..++..... ..+.|.|.|+||+||+.+|.+.|+.
T Consensus 54 ~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~-aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~ 127 (210)
T COG2945 54 RALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAA-AALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI 127 (210)
T ss_pred HHHHhCCceEEeecccccccccCcccCCcchHHHHH-HHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc
Confidence 3344 4699999999999999863221111233432 33344444433 3457999999999999999998764
No 105
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.53 E-value=1.6e-07 Score=73.98 Aligned_cols=53 Identities=11% Similarity=0.139 Sum_probs=39.6
Q ss_pred hhhHHHHHHHHHHHc---C--CceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 43 WLNYLLACHRVVNHF---A--WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l---~--~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+...++.+.++++.. + .++++|.|.|.||++|+.++.++|+.+.++|.+++..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 334445555665543 3 3589999999999999999999999999999887543
No 106
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.48 E-value=7.5e-08 Score=77.87 Aligned_cols=78 Identities=23% Similarity=0.264 Sum_probs=47.5
Q ss_pred HhhhccCCC-CCeEEEEcCC----CCCCCCCCCCCCccchhhHHHHHHHHHHHc--------CCceEEEEEeChhHHHHH
Q psy16156 9 DKLLPLLPA-RYYYVCIDLP----GHGLSSHFPPGMLLDWLNYLLACHRVVNHF--------AWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 9 ~~~~~~L~~-~y~vi~~Dl~----GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l--------~~~~~~lvGhSmGG~ia~ 75 (260)
..++..|.+ +|.|+-+-|+ |+|.| ++++=++||.++++.+ +.++++|+|||-|.--.+
T Consensus 53 ~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl 123 (303)
T PF08538_consen 53 PDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVL 123 (303)
T ss_dssp HHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHH
T ss_pred HHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHH
Confidence 456677764 6999988664 44433 3443355555555533 457999999999999999
Q ss_pred HHHHhCc-----chhhhHHhhcccC
Q psy16156 76 HYAAMFP-----QLMDRLILLDAMN 95 (260)
Q Consensus 76 ~~a~~~p-----~~v~~lvlid~~~ 95 (260)
+|+.... ..|++.||-.+..
T Consensus 124 ~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 124 HYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp HHHHH-TT---CCCEEEEEEEEE--
T ss_pred HHHhccCccccccceEEEEEeCCCC
Confidence 9998753 6799999986554
No 107
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.46 E-value=9.3e-07 Score=69.82 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=51.4
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCcc-c-hhhHHHHHHHHHHHc-----CCceEEEEEeChhHHHHHHHHHhCc---chhhh
Q psy16156 18 RYYYVCIDLPGHGLSSHFPPGMLL-D-WLNYLLACHRVVNHF-----AWTKFIWLGHSLGGQLGTHYAAMFP---QLMDR 87 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~~~~~~~-~-~~~~a~dl~~~~~~l-----~~~~~~lvGhSmGG~ia~~~a~~~p---~~v~~ 87 (260)
.++++++|+......-. +... + -....+.+..+++.. +.++++||||||||.||..++...+ +.|+.
T Consensus 39 ~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~ 115 (225)
T PF07819_consen 39 HFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKT 115 (225)
T ss_pred ceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEE
Confidence 58899999887643321 1111 1 112234455555555 5689999999999999998887643 57999
Q ss_pred HHhhcccC
Q psy16156 88 LILLDAMN 95 (260)
Q Consensus 88 lvlid~~~ 95 (260)
+|.+++|.
T Consensus 116 iitl~tPh 123 (225)
T PF07819_consen 116 IITLGTPH 123 (225)
T ss_pred EEEEcCCC
Confidence 99998765
No 108
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.45 E-value=1.3e-06 Score=68.85 Aligned_cols=81 Identities=20% Similarity=0.109 Sum_probs=48.4
Q ss_pred HhhhccCCC-CCeEEEEcCCCCCC-CCCCCCCCccc--------hhhHHHHHHHHHHHc---C---CceEEEEEeChhHH
Q psy16156 9 DKLLPLLPA-RYYYVCIDLPGHGL-SSHFPPGMLLD--------WLNYLLACHRVVNHF---A---WTKFIWLGHSLGGQ 72 (260)
Q Consensus 9 ~~~~~~L~~-~y~vi~~Dl~GhG~-S~~~~~~~~~~--------~~~~a~dl~~~~~~l---~---~~~~~lvGhSmGG~ 72 (260)
+.++..|++ +|.|++||+-+-.. ....+...... .....+|+.+.++.+ . .+++-++|.|+||.
T Consensus 31 ~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~ 110 (218)
T PF01738_consen 31 RDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGK 110 (218)
T ss_dssp HHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHH
T ss_pred HHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchH
Confidence 345677764 69999999866554 11111110001 124556665555544 2 36899999999999
Q ss_pred HHHHHHHhCcchhhhHHh
Q psy16156 73 LGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 73 ia~~~a~~~p~~v~~lvl 90 (260)
+|+.+|.+. +++++.|.
T Consensus 111 ~a~~~a~~~-~~~~a~v~ 127 (218)
T PF01738_consen 111 LALLLAARD-PRVDAAVS 127 (218)
T ss_dssp HHHHHHCCT-TTSSEEEE
T ss_pred Hhhhhhhhc-cccceEEE
Confidence 999988776 55554443
No 109
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.43 E-value=5.3e-07 Score=68.01 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=46.3
Q ss_pred hccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH-HhCcchhhhHHh
Q psy16156 12 LPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA-AMFPQLMDRLIL 90 (260)
Q Consensus 12 ~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a-~~~p~~v~~lvl 90 (260)
...|...++|-.+|+ +. -+.+++...+.+-+.... ++++|||||+|+..+++++ .....+|.+++|
T Consensus 20 ~~~l~~~~~V~~~~~------~~------P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lL 86 (171)
T PF06821_consen 20 ERQLENSVRVEQPDW------DN------PDLDEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALL 86 (171)
T ss_dssp HHHHTTSEEEEEC--------TS--------HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEE
T ss_pred HHhCCCCeEEecccc------CC------CCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEE
Confidence 344444467766665 11 134555655555555442 5699999999999999999 778889999999
Q ss_pred hccc
Q psy16156 91 LDAM 94 (260)
Q Consensus 91 id~~ 94 (260)
+.++
T Consensus 87 VAp~ 90 (171)
T PF06821_consen 87 VAPF 90 (171)
T ss_dssp ES--
T ss_pred EcCC
Confidence 9754
No 110
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.42 E-value=6.9e-07 Score=70.04 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHcC-C--ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 45 NYLLACHRVVNHFA-W--TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 45 ~~a~dl~~~~~~l~-~--~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+|.++..+++.... . +++-|+|.|.||-+|+.+|..+| .|+.+|.+++..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 45566666666663 2 58999999999999999999999 999999987544
No 111
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.29 E-value=2.1e-06 Score=75.00 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=56.3
Q ss_pred CCCeEEEEcCC-CCCCCCCCCCCCccchhhHHHHHHHHHHH-------cCCceEEEEEeChhHHHHHHHHHhC---c---
Q psy16156 17 ARYYYVCIDLP-GHGLSSHFPPGMLLDWLNYLLACHRVVNH-------FAWTKFIWLGHSLGGQLGTHYAAMF---P--- 82 (260)
Q Consensus 17 ~~y~vi~~Dl~-GhG~S~~~~~~~~~~~~~~a~dl~~~~~~-------l~~~~~~lvGhSmGG~ia~~~a~~~---p--- 82 (260)
+...++.+|+| |+|.|.........+..+.++|+.++++. ++..+++|+||||||..+..+|..- .
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 45789999986 89888643222234456889999888884 3457999999999999998887652 1
Q ss_pred ----chhhhHHhhccc
Q psy16156 83 ----QLMDRLILLDAM 94 (260)
Q Consensus 83 ----~~v~~lvlid~~ 94 (260)
=.++++++-|+.
T Consensus 200 ~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 200 DGLYINLAGLAVGNGL 215 (462)
T ss_pred CCceeeeEEEEEeccc
Confidence 136777776643
No 112
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.24 E-value=2.7e-06 Score=64.16 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=53.7
Q ss_pred hhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHH----cCCceEEEEEeChhHHHHHHHHHhCcc--
Q psy16156 11 LLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH----FAWTKFIWLGHSLGGQLGTHYAAMFPQ-- 83 (260)
Q Consensus 11 ~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~----l~~~~~~lvGhSmGG~ia~~~a~~~p~-- 83 (260)
++..|++ ++.|+.+|-+=|=.+.+. .++.+.|+.+++++ .+.+++.|||.|+|+-|.-...-+-|.
T Consensus 21 ~a~~l~~~G~~VvGvdsl~Yfw~~rt-------P~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~ 93 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSLRYFWSERT-------PEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAAL 93 (192)
T ss_pred HHHHHHHCCCeEEEechHHHHhhhCC-------HHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHH
Confidence 5667764 699999997766655553 34556666666654 477899999999999888777766665
Q ss_pred --hhhhHHhhc
Q psy16156 84 --LMDRLILLD 92 (260)
Q Consensus 84 --~v~~lvlid 92 (260)
+|..++|+.
T Consensus 94 r~~v~~v~Ll~ 104 (192)
T PF06057_consen 94 RARVAQVVLLS 104 (192)
T ss_pred HhheeEEEEec
Confidence 466666664
No 113
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.23 E-value=1.1e-06 Score=70.30 Aligned_cols=94 Identities=20% Similarity=0.322 Sum_probs=56.7
Q ss_pred CcccccchHhhhccCC-CC---CeEEEEc--CCCC----CC-C--CCCC-------CCCccchhhHHHHHHHHHHHc---
Q psy16156 1 MQDNAASFDKLLPLLP-AR---YYYVCID--LPGH----GL-S--SHFP-------PGMLLDWLNYLLACHRVVNHF--- 57 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~-~~---y~vi~~D--l~Gh----G~-S--~~~~-------~~~~~~~~~~a~dl~~~~~~l--- 57 (260)
|..+..+++.++..+. +. -.++.++ --|+ |. + .+.| ....-+....+..+..++..|
T Consensus 20 ~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~~vl~~L~~~ 99 (255)
T PF06028_consen 20 YGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLKKVLKYLKKK 99 (255)
T ss_dssp TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHHHHHHHHHHC
T ss_pred CCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHHHHHHHHHHh
Confidence 5677778888888775 21 2444332 2222 11 0 1111 111113556667666666655
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhCcc-----hhhhHHhhccc
Q psy16156 58 -AWTKFIWLGHSLGGQLGTHYAAMFPQ-----LMDRLILLDAM 94 (260)
Q Consensus 58 -~~~~~~lvGhSmGG~ia~~~a~~~p~-----~v~~lvlid~~ 94 (260)
+++++.+|||||||++++.|+..+.. +|.++|.|+++
T Consensus 100 Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 100 YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred cCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 78999999999999999999998744 58999999754
No 114
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.23 E-value=1.9e-05 Score=61.46 Aligned_cols=196 Identities=15% Similarity=0.078 Sum_probs=88.2
Q ss_pred ccccchHhhhccCCC-CCeEEEEcCCCC-CCCCCCCCCCccchhhHHHHHHHHH---HHcCCceEEEEEeChhHHHHHHH
Q psy16156 3 DNAASFDKLLPLLPA-RYYYVCIDLPGH-GLSSHFPPGMLLDWLNYLLACHRVV---NHFAWTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~-~y~vi~~Dl~Gh-G~S~~~~~~~~~~~~~~a~dl~~~~---~~l~~~~~~lvGhSmGG~ia~~~ 77 (260)
..-..|..++.+|+. +|+||-+|---| |.|+... ..|++....+++..++ +..|++++-||.-|+.|.||+..
T Consensus 41 rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~V 118 (294)
T PF02273_consen 41 RRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEV 118 (294)
T ss_dssp GGGGGGHHHHHHHHTTT--EEEE---B---------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHH
Confidence 445678889999975 699999999999 9998743 3477766666665544 45588999999999999999999
Q ss_pred HHhCcchhhhHHhhcccCCCCcchhHHHHHHHHHHHHhHhHHHhhcCCCCCCCCHHHHHHHHHhccccCCCCHHHHHHHH
Q psy16156 78 AAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILF 157 (260)
Q Consensus 78 a~~~p~~v~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
|.+- + +.-||..- + ..+...+.. ...++... . .+ . +.+-.
T Consensus 119 a~~i-~-lsfLitaV--G--VVnlr~TLe-------~al~~Dyl-~---~~----i---~~lp~---------------- 158 (294)
T PF02273_consen 119 AADI-N-LSFLITAV--G--VVNLRDTLE-------KALGYDYL-Q---LP----I---EQLPE---------------- 158 (294)
T ss_dssp TTTS----SEEEEES------S-HHHHHH-------HHHSS-GG-G---S-----G---GG--S----------------
T ss_pred hhcc-C-cceEEEEe--e--eeeHHHHHH-------HHhccchh-h---cc----h---hhCCC----------------
Confidence 9843 2 44444332 2 112222222 11211100 0 00 0 00000
Q ss_pred HhcceecCCceEEeecccccccc-ccCCCHHHHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEE
Q psy16156 158 TRAVSARDGGFVFNFDQRLKNKI-YLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (260)
.+. -.|+.+..+..+.... ..+-+.+...+.++.+.+|.+...+++|..+.. . ...+.+..+..+.+++..
T Consensus 159 --dld--feGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q---~-eV~~~~~~~~s~~~klys 230 (294)
T PF02273_consen 159 --DLD--FEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQ---S-EVEELLDNINSNKCKLYS 230 (294)
T ss_dssp --EEE--ETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-H---H-HHHHHHTT-TT--EEEEE
T ss_pred --ccc--ccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccH---H-HHHHHHHhcCCCceeEEE
Confidence 000 0111111111011000 133444556778899999999999999986554 1 223445544435678888
Q ss_pred EcC-CCCCCCCChH
Q psy16156 237 VDS-GHDMELEEPE 249 (260)
Q Consensus 237 ~~~-gH~~~~e~p~ 249 (260)
++| +|-+- |+|-
T Consensus 231 l~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 231 LPGSSHDLG-ENLV 243 (294)
T ss_dssp ETT-SS-TT-SSHH
T ss_pred ecCccchhh-hChH
Confidence 887 67654 4443
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.19 E-value=1.4e-05 Score=58.17 Aligned_cols=85 Identities=22% Similarity=0.302 Sum_probs=58.1
Q ss_pred chHhhhccCCC-CCeEEEEcCCC-----CCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 7 SFDKLLPLLPA-RYYYVCIDLPG-----HGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 7 ~w~~~~~~L~~-~y~vi~~Dl~G-----hG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+-..++..|+. ++.|.-+.+|= .|.- ++|++...-...+...+.++...+.-.+.++-||||||.++...|..
T Consensus 31 ~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-kPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade 109 (213)
T COG3571 31 SMTAVAAALARRGWLVARFEFPYMAARRTGRR-KPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADE 109 (213)
T ss_pred HHHHHHHHHHhCceeEEEeecchhhhccccCC-CCcCccccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHh
Confidence 34556666664 47787777653 3322 22333222244778888888888877799999999999999998876
Q ss_pred CcchhhhHHhhc
Q psy16156 81 FPQLMDRLILLD 92 (260)
Q Consensus 81 ~p~~v~~lvlid 92 (260)
---.|.+|++++
T Consensus 110 ~~A~i~~L~clg 121 (213)
T COG3571 110 LQAPIDGLVCLG 121 (213)
T ss_pred hcCCcceEEEec
Confidence 433488888875
No 116
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.15 E-value=2.6e-05 Score=64.14 Aligned_cols=71 Identities=21% Similarity=0.191 Sum_probs=48.7
Q ss_pred hhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC---ceEEEEEeChhHHHHHHHHHhC
Q psy16156 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW---TKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 11 ~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
+...|+.+|-|+++|..|-|..--......+++-+.++...++....|+ .++.++|||-||.-++..|...
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 4566788999999999999983211111124455555555555554454 4799999999999988777553
No 117
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.02 E-value=2.2e-06 Score=73.31 Aligned_cols=85 Identities=21% Similarity=0.331 Sum_probs=54.4
Q ss_pred chHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc---CCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 7 SFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF---AWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 7 ~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
.|..++..|.+ +|. --.|++|++---+... ...+++...|+++++.. +-++++||||||||.++..+....+
T Consensus 66 ~~~~li~~L~~~GY~-~~~~l~~~pYDWR~~~---~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 66 YFAKLIENLEKLGYD-RGKDLFAAPYDWRLSP---AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred hHHHHHHHHHhcCcc-cCCEEEEEeechhhch---hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 58888888875 232 2233333332221111 12335555665555543 3579999999999999999998875
Q ss_pred c------hhhhHHhhcccC
Q psy16156 83 Q------LMDRLILLDAMN 95 (260)
Q Consensus 83 ~------~v~~lvlid~~~ 95 (260)
. .|+++|.++++.
T Consensus 142 ~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 142 QEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred chhhHHhhhhEEEEeCCCC
Confidence 4 489999987553
No 118
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.95 E-value=1.7e-05 Score=64.70 Aligned_cols=79 Identities=20% Similarity=0.125 Sum_probs=54.3
Q ss_pred cCCCCCeEEEEcCCCCCCCCCCCCCC-ccchhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 14 LLPARYYYVCIDLPGHGLSSHFPPGM-LLDWLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 14 ~L~~~y~vi~~Dl~GhG~S~~~~~~~-~~~~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
..+.+|-|+..|.||.|.|+...... .-+..+ ..|+++++..... .++-++|.|.+|+.++..|...|..++.++.
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D-~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p 131 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQD-GYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVP 131 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHH-HHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEE
T ss_pred HHhCCCEEEEECCcccccCCCccccCChhHHHH-HHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEe
Confidence 33467999999999999998633211 111112 3356666666654 4899999999999999999999999999888
Q ss_pred hcc
Q psy16156 91 LDA 93 (260)
Q Consensus 91 id~ 93 (260)
..+
T Consensus 132 ~~~ 134 (272)
T PF02129_consen 132 QSG 134 (272)
T ss_dssp ESE
T ss_pred ccc
Confidence 654
No 119
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.93 E-value=8e-06 Score=65.01 Aligned_cols=88 Identities=22% Similarity=0.258 Sum_probs=57.9
Q ss_pred cchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHH-HHHHc------CCceEEEEEeChhHHHHHHH
Q psy16156 6 ASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHR-VVNHF------AWTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 6 ~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~-~~~~l------~~~~~~lvGhSmGG~ia~~~ 77 (260)
..+..+..+++. +|-|+++|+...+...... ..-+..+.++.+.+ +-..+ +..++.|.|||-||-+|..+
T Consensus 31 s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~ 108 (259)
T PF12740_consen 31 SWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAM 108 (259)
T ss_pred HHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHH
Confidence 347778888887 4999999977654322111 01112222222222 11122 45689999999999999999
Q ss_pred HHhC-----cchhhhHHhhcccC
Q psy16156 78 AAMF-----PQLMDRLILLDAMN 95 (260)
Q Consensus 78 a~~~-----p~~v~~lvlid~~~ 95 (260)
+..+ +.+++++|++|+..
T Consensus 109 al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 109 ALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HhhhcccccccceeEEEEecccc
Confidence 9998 66899999999664
No 120
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.81 E-value=8.1e-05 Score=61.01 Aligned_cols=71 Identities=24% Similarity=0.300 Sum_probs=46.4
Q ss_pred chHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHH-HHc-CC--ceEEEEEeChhHHHHHHHHHhC
Q psy16156 7 SFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVV-NHF-AW--TKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 7 ~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~-~~l-~~--~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
.|.+++..+ +-+|+.+..||.|.|...+. ..++-.-.+.+.+.+ ++. |+ +++++-|||+||.|+...+..+
T Consensus 162 ~~~~~ak~~--~aNvl~fNYpGVg~S~G~~s--~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 162 WIQRFAKEL--GANVLVFNYPGVGSSTGPPS--RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHc--CCcEEEECCCccccCCCCCC--HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 466666655 36899999999999976331 223322222333333 322 33 7899999999999999755554
No 121
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.81 E-value=2.3e-05 Score=58.12 Aligned_cols=51 Identities=18% Similarity=0.106 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHc----CCceEEEEEeChhHHHHHHHHHhCcc----hhhhHHhhcccC
Q psy16156 45 NYLLACHRVVNHF----AWTKFIWLGHSLGGQLGTHYAAMFPQ----LMDRLILLDAMN 95 (260)
Q Consensus 45 ~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ia~~~a~~~p~----~v~~lvlid~~~ 95 (260)
.....+...++.. ...+++++||||||.||..+|...++ .+..++..+++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 3444444444443 56899999999999999999988765 455566666543
No 122
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.81 E-value=5.7e-05 Score=54.97 Aligned_cols=38 Identities=32% Similarity=0.403 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
...+.+.++++..+..++++.|||+||.+|..++....
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 45667788887777789999999999999999988643
No 123
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.80 E-value=3.4e-05 Score=64.40 Aligned_cols=84 Identities=15% Similarity=0.115 Sum_probs=49.0
Q ss_pred hhccCCC-CCeEEEEcCCCCCCCCCCCC---CCccchhhHHH---------------H---HHHHHHHc---CCceEEEE
Q psy16156 11 LLPLLPA-RYYYVCIDLPGHGLSSHFPP---GMLLDWLNYLL---------------A---CHRVVNHF---AWTKFIWL 65 (260)
Q Consensus 11 ~~~~L~~-~y~vi~~Dl~GhG~S~~~~~---~~~~~~~~~a~---------------d---l~~~~~~l---~~~~~~lv 65 (260)
....|++ +|-|+++|.+|+|+...... +..++.+.++. | +..++..+ .-+++-++
T Consensus 152 ~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~ 231 (390)
T PF12715_consen 152 YGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCM 231 (390)
T ss_dssp HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEE
T ss_pred HHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEE
Confidence 3556665 69999999999999865321 11233222222 1 12333333 23689999
Q ss_pred EeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 66 GHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 66 GhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
|+||||..++.+|+.. ++|+..|..+..+
T Consensus 232 GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 232 GFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp EEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred eecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 9999999999999995 6887777665443
No 124
>PRK10115 protease 2; Provisional
Probab=97.79 E-value=0.00092 Score=61.59 Aligned_cols=80 Identities=21% Similarity=0.247 Sum_probs=57.9
Q ss_pred ccCCCCCeEEEEcCCCCCCCCCC--C----CCCccchhhHHHHHHHHHHHcC---CceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 13 PLLPARYYYVCIDLPGHGLSSHF--P----PGMLLDWLNYLLACHRVVNHFA---WTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 13 ~~L~~~y~vi~~Dl~GhG~S~~~--~----~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
..++.+|-|+.+..||-|.=... . ....-++.++++-+..+++. | -+++.+.|-|.||+++...+.++|+
T Consensus 469 ~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd 547 (686)
T PRK10115 469 SLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPE 547 (686)
T ss_pred HHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChh
Confidence 34557899999999997654320 0 11123466666666666554 5 3689999999999999999999999
Q ss_pred hhhhHHhhcc
Q psy16156 84 LMDRLILLDA 93 (260)
Q Consensus 84 ~v~~lvlid~ 93 (260)
++++.|+..+
T Consensus 548 lf~A~v~~vp 557 (686)
T PRK10115 548 LFHGVIAQVP 557 (686)
T ss_pred heeEEEecCC
Confidence 9999998643
No 125
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.78 E-value=1.9e-05 Score=61.77 Aligned_cols=76 Identities=18% Similarity=0.171 Sum_probs=43.2
Q ss_pred cccchHhhhccCCC-CCe---EEEEcCCCCCCCCCCCCCCccc---hhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHH
Q psy16156 4 NAASFDKLLPLLPA-RYY---YVCIDLPGHGLSSHFPPGMLLD---WLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 4 ~~~~w~~~~~~L~~-~y~---vi~~Dl~GhG~S~~~~~~~~~~---~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~ 76 (260)
....|..+++.|++ +|. |++++.-....+.... ..... ..++++-|.++++.=|- ++.||||||||.++-.
T Consensus 14 ~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~-~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~ 91 (219)
T PF01674_consen 14 AYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ-NAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARY 91 (219)
T ss_dssp TCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH-HHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHH
T ss_pred hhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc-ccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHH
Confidence 45789999999974 587 7999874433322110 00101 12334444444445577 9999999999999988
Q ss_pred HHHhC
Q psy16156 77 YAAMF 81 (260)
Q Consensus 77 ~a~~~ 81 (260)
|....
T Consensus 92 yi~~~ 96 (219)
T PF01674_consen 92 YIKGG 96 (219)
T ss_dssp HHHHC
T ss_pred HHHHc
Confidence 87643
No 126
>KOG1553|consensus
Probab=97.74 E-value=6.5e-05 Score=61.37 Aligned_cols=73 Identities=22% Similarity=0.323 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHH-HHHHcCC--ceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 15 LPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHR-VVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 15 L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~-~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
+.-+|.|+.+.+|||+.|...|- +..-...++.+.+ .+..||. +.++|.|+|.||.-+...|..||+ |+++||
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvL 340 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVL 340 (517)
T ss_pred HHhCceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEe
Confidence 44579999999999999987552 1222233444444 4556664 689999999999999999999997 666665
No 127
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.73 E-value=3.9e-05 Score=61.70 Aligned_cols=50 Identities=18% Similarity=0.116 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHc-CCce--EEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 45 NYLLACHRVVNHF-AWTK--FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 45 ~~a~dl~~~~~~l-~~~~--~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
-+.++|...++.. ...+ ..|+|+||||..|+.+|.+||+.+.+++.+++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3455777776644 4332 699999999999999999999999999999855
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.71 E-value=7.2e-05 Score=64.46 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHc-----CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 45 NYLLACHRVVNHF-----AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 45 ~~a~dl~~~~~~l-----~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
.++++|.-++++. +-++..|+|+||||..|+.++.+||+++.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 4456777777654 3357899999999999999999999999999988753
No 129
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.69 E-value=0.00082 Score=55.69 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=55.0
Q ss_pred ccCCCCCeEEEEcCCCCCCCCCCCC-CCcc-chhhH----------HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 13 PLLPARYYYVCIDLPGHGLSSHFPP-GMLL-DWLNY----------LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 13 ~~L~~~y~vi~~Dl~GhG~S~~~~~-~~~~-~~~~~----------a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|.|+++...+.+..|=||.-.+... +..+ .+.++ +.-|..++++.|..++-|.|-||||.+|...|..
T Consensus 116 pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 116 PLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASN 195 (348)
T ss_pred HHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhc
Confidence 4455678888899999987643110 1000 01111 2335566667799999999999999999999999
Q ss_pred CcchhhhHHhhc
Q psy16156 81 FPQLMDRLILLD 92 (260)
Q Consensus 81 ~p~~v~~lvlid 92 (260)
+|..|..+-+++
T Consensus 196 ~p~pv~~vp~ls 207 (348)
T PF09752_consen 196 WPRPVALVPCLS 207 (348)
T ss_pred CCCceeEEEeec
Confidence 999877665555
No 130
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.64 E-value=0.00011 Score=54.39 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=38.8
Q ss_pred hhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 43 WLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
++++++.|.+-+... -++++||+||+|+..+..++.+....|++++|+.++
T Consensus 43 ~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 43 LDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCC
Confidence 445555555444444 345999999999999999999877799999999654
No 131
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.61 E-value=8e-05 Score=58.72 Aligned_cols=87 Identities=20% Similarity=0.238 Sum_probs=57.9
Q ss_pred cccchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchh---hHHHHHHHHHHHc-------CCceEEEEEeChhHH
Q psy16156 4 NAASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWL---NYLLACHRVVNHF-------AWTKFIWLGHSLGGQ 72 (260)
Q Consensus 4 ~~~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~---~~a~dl~~~~~~l-------~~~~~~lvGhSmGG~ 72 (260)
....|..+..+++. +|=|+|||+-.- .. +++. -+++ ..++.+-+-+.++ ++.++.|+|||.||-
T Consensus 58 ~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~--p~~~-~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGk 132 (307)
T PF07224_consen 58 YNSFYSQLLAHIASHGFIVVAPQLYTL--FP--PDGQ-DEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGK 132 (307)
T ss_pred hhHHHHHHHHHHhhcCeEEEechhhcc--cC--CCch-HHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccH
Confidence 34567778888876 499999999752 21 2221 1222 2233333333222 467999999999999
Q ss_pred HHHHHHHhCc-c-hhhhHHhhcccC
Q psy16156 73 LGTHYAAMFP-Q-LMDRLILLDAMN 95 (260)
Q Consensus 73 ia~~~a~~~p-~-~v~~lvlid~~~ 95 (260)
.|..+|+.|. + .+..||-+|+..
T Consensus 133 tAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 133 TAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHHhcccccCchhheecccccC
Confidence 9999999884 2 588999999654
No 132
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.59 E-value=7.6e-05 Score=62.36 Aligned_cols=79 Identities=15% Similarity=0.238 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHH----Hc--CCceEEEEEeChhHHHHHHHHHhCcc--hhhhH
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVN----HF--AWTKFIWLGHSLGGQLGTHYAAMFPQ--LMDRL 88 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~----~l--~~~~~~lvGhSmGG~ia~~~a~~~p~--~v~~l 88 (260)
+.+.||++|...--.. .... ........+..|..++. .. ..++++|||||+||.||-..+..... +|..+
T Consensus 103 ~d~NVI~VDWs~~a~~-~Y~~-a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rI 180 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASN-NYPQ-AVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRI 180 (331)
T ss_dssp S-EEEEEEE-HHHHSS--HHH-HHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEE
T ss_pred CCceEEEEcchhhccc-cccc-hhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEE
Confidence 3699999998533211 1000 00012223333333333 33 35799999999999999999988777 99999
Q ss_pred HhhcccCCC
Q psy16156 89 ILLDAMNQR 97 (260)
Q Consensus 89 vlid~~~~~ 97 (260)
+-+|++.|.
T Consensus 181 tgLDPAgP~ 189 (331)
T PF00151_consen 181 TGLDPAGPL 189 (331)
T ss_dssp EEES-B-TT
T ss_pred EecCccccc
Confidence 999988764
No 133
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.58 E-value=0.00011 Score=64.61 Aligned_cols=86 Identities=12% Similarity=0.058 Sum_probs=52.3
Q ss_pred chHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc----CCceEEEEEeChhHHHHHHHHHhC
Q psy16156 7 SFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 7 ~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
.|..+++.|++ +|. --|+.|-..--+........-++|...|+.+++.. +-++++||||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 46889998875 464 34555444332211100111235555555555533 358999999999999999987642
Q ss_pred -----------c----chhhhHHhhccc
Q psy16156 82 -----------P----QLMDRLILLDAM 94 (260)
Q Consensus 82 -----------p----~~v~~lvlid~~ 94 (260)
+ +.|++.|.|+++
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccc
Confidence 1 247888888753
No 134
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.55 E-value=8.9e-05 Score=62.26 Aligned_cols=71 Identities=15% Similarity=0.237 Sum_probs=55.4
Q ss_pred EEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc--chhhhHHhhcccC
Q psy16156 21 YVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP--QLMDRLILLDAMN 95 (260)
Q Consensus 21 vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p--~~v~~lvlid~~~ 95 (260)
++++++++-. ... + ....-+++..-|.+++...+.+++.|+||||||.+...++...+ .+|++++.+.++.
T Consensus 92 ~~~~~~~~~~-~~~-~--~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 92 VYAFELSGGD-GTY-S--LAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred cccccccccC-CCc-c--ccccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 7777777651 111 1 12334567777888888989999999999999999999999988 8999999998665
No 135
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.52 E-value=0.00037 Score=60.86 Aligned_cols=77 Identities=21% Similarity=0.209 Sum_probs=54.8
Q ss_pred CeEEEEcCCCCCCCCCCCCC----C-ccchhhHHHHHHHHHHHcC-------CceEEEEEeChhHHHHHHHHHhCcchhh
Q psy16156 19 YYYVCIDLPGHGLSSHFPPG----M-LLDWLNYLLACHRVVNHFA-------WTKFIWLGHSLGGQLGTHYAAMFPQLMD 86 (260)
Q Consensus 19 y~vi~~Dl~GhG~S~~~~~~----~-~~~~~~~a~dl~~~~~~l~-------~~~~~lvGhSmGG~ia~~~a~~~p~~v~ 86 (260)
--||++.+|=||+|.+.... . -.+.++..+|+..|++++. -.+++++|-|.||++|..+-.+||+.|.
T Consensus 60 a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ 139 (434)
T PF05577_consen 60 ALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFD 139 (434)
T ss_dssp EEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-S
T ss_pred CcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeE
Confidence 47999999999999863211 1 1367888899999988764 1379999999999999999999999999
Q ss_pred hHHhhcccC
Q psy16156 87 RLILLDAMN 95 (260)
Q Consensus 87 ~lvlid~~~ 95 (260)
+.+..+++.
T Consensus 140 ga~ASSapv 148 (434)
T PF05577_consen 140 GAWASSAPV 148 (434)
T ss_dssp EEEEET--C
T ss_pred EEEecccee
Confidence 888766443
No 136
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.51 E-value=0.00012 Score=57.73 Aligned_cols=46 Identities=22% Similarity=0.325 Sum_probs=35.8
Q ss_pred HHHHHHHcCCceEEEEEeChhHHHHHHHHHhC----cchhhhHHhhcccCC
Q psy16156 50 CHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMF----PQLMDRLILLDAMNQ 96 (260)
Q Consensus 50 l~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~----p~~v~~lvlid~~~~ 96 (260)
+..+++..+ .++++.|||.||.+|+..|+.. .++|.+++..|++++
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 445555544 3599999999999999999884 357888888998774
No 137
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.47 E-value=0.00012 Score=57.31 Aligned_cols=93 Identities=23% Similarity=0.279 Sum_probs=61.5
Q ss_pred cccccchHhhhccCCCCCe------EEEEcCCCC----CCCCCC---C------CCCccchhhHHHHHHHHHHHc----C
Q psy16156 2 QDNAASFDKLLPLLPARYY------YVCIDLPGH----GLSSHF---P------PGMLLDWLNYLLACHRVVNHF----A 58 (260)
Q Consensus 2 ~~~~~~w~~~~~~L~~~y~------vi~~Dl~Gh----G~S~~~---~------~~~~~~~~~~a~dl~~~~~~l----~ 58 (260)
.+++.+.+..+..|.++|+ ++..|-=|- |.=++. | +...-+..+++..+..+++.| +
T Consensus 55 gG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~msyL~~~Y~ 134 (288)
T COG4814 55 GGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAMSYLQKHYN 134 (288)
T ss_pred CCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHHHHHHHhcC
Confidence 3567777888888876662 445665551 111110 1 001124556677777777655 7
Q ss_pred CceEEEEEeChhHHHHHHHHHhCcc-----hhhhHHhhccc
Q psy16156 59 WTKFIWLGHSLGGQLGTHYAAMFPQ-----LMDRLILLDAM 94 (260)
Q Consensus 59 ~~~~~lvGhSmGG~ia~~~a~~~p~-----~v~~lvlid~~ 94 (260)
++++..|||||||.-...|+..|.+ .++++|.++++
T Consensus 135 i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 135 IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 8999999999999999999998754 37888888754
No 138
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.42 E-value=0.00012 Score=57.58 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~ 79 (260)
.+++.|.+.++....+ ++++|||||||.|+-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 4555666666555543 8999999999999964443
No 139
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.34 E-value=0.00044 Score=55.01 Aligned_cols=62 Identities=10% Similarity=-0.000 Sum_probs=39.3
Q ss_pred CeEEEEcCCCCCCCCCCCCC---CccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 19 YYYVCIDLPGHGLSSHFPPG---MLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 19 y~vi~~Dl~GhG~S~~~~~~---~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
..+|.+..|..|.-...... ..++-..+++-|..+.+..+.++++|++||||+.|.+.....
T Consensus 49 ~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 49 GVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred ceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHH
Confidence 48999999999864321111 012222333333333334467899999999999999977544
No 140
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.34 E-value=0.00029 Score=56.16 Aligned_cols=82 Identities=18% Similarity=0.200 Sum_probs=57.4
Q ss_pred chHhhhccCCC-CCeEEEEcCCCC-CCCCCCCCCC----c-----cchhhHHHHHHHHHHHcC------CceEEEEEeCh
Q psy16156 7 SFDKLLPLLPA-RYYYVCIDLPGH-GLSSHFPPGM----L-----LDWLNYLLACHRVVNHFA------WTKFIWLGHSL 69 (260)
Q Consensus 7 ~w~~~~~~L~~-~y~vi~~Dl~Gh-G~S~~~~~~~----~-----~~~~~~a~dl~~~~~~l~------~~~~~lvGhSm 69 (260)
..+.+...|++ +|-|++||+-+. |.+....... . .+..+...|+.+.++.|. .+++-++|.||
T Consensus 42 ~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~ 121 (236)
T COG0412 42 HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCM 121 (236)
T ss_pred HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcc
Confidence 45667788875 699999999884 5554322110 0 112466777777777663 46799999999
Q ss_pred hHHHHHHHHHhCcchhhhHH
Q psy16156 70 GGQLGTHYAAMFPQLMDRLI 89 (260)
Q Consensus 70 GG~ia~~~a~~~p~~v~~lv 89 (260)
||.+++.+|.+.| +|++.|
T Consensus 122 GG~~a~~~a~~~~-~v~a~v 140 (236)
T COG0412 122 GGGLALLAATRAP-EVKAAV 140 (236)
T ss_pred cHHHHHHhhcccC-CccEEE
Confidence 9999999999988 444444
No 141
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.32 E-value=0.00019 Score=55.96 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCcc--chhhHHHHHHHHHHH-----cCCceEEEEEeChhHHHHHHHHHhCcch----h
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLL--DWLNYLLACHRVVNH-----FAWTKFIWLGHSLGGQLGTHYAAMFPQL----M 85 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~--~~~~~a~dl~~~~~~-----l~~~~~~lvGhSmGG~ia~~~a~~~p~~----v 85 (260)
.++.|+.+|.|= + |+ ..+ .+++..+-+..+++. .+.++++|+|+|-||.+|+.++.+..+. +
T Consensus 28 ~g~~v~~~~Yrl---~---p~-~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~ 100 (211)
T PF07859_consen 28 RGFVVVSIDYRL---A---PE-APFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKP 100 (211)
T ss_dssp HTSEEEEEE------T---TT-SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHE
T ss_pred ccEEEEEeeccc---c---cc-ccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccch
Confidence 479999999992 2 21 122 244555555555555 4457999999999999999999875553 7
Q ss_pred hhHHhhccc
Q psy16156 86 DRLILLDAM 94 (260)
Q Consensus 86 ~~lvlid~~ 94 (260)
++++++.+.
T Consensus 101 ~~~~~~~p~ 109 (211)
T PF07859_consen 101 KGIILISPW 109 (211)
T ss_dssp SEEEEESCH
T ss_pred hhhhccccc
Confidence 888888754
No 142
>KOG2369|consensus
Probab=97.31 E-value=0.00033 Score=59.80 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc--------hhhhHHhhccc
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ--------LMDRLILLDAM 94 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~--------~v~~lvlid~~ 94 (260)
.+..-++...+.-|-+|++||||||||.+.+.+...+++ -|++.|-++++
T Consensus 167 kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 167 KLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 334444444444466999999999999999999999887 37777777643
No 143
>KOG3724|consensus
Probab=97.25 E-value=0.00027 Score=63.63 Aligned_cols=36 Identities=22% Similarity=0.425 Sum_probs=27.5
Q ss_pred ceEEEEEeChhHHHHHHHHHh---CcchhhhHHhhcccC
Q psy16156 60 TKFIWLGHSLGGQLGTHYAAM---FPQLMDRLILLDAMN 95 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~~~a~~---~p~~v~~lvlid~~~ 95 (260)
..++||||||||+||...+.. .++.|.-+|..+++.
T Consensus 182 ~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred ceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 359999999999999877654 355677777777654
No 144
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.11 E-value=0.00094 Score=52.98 Aligned_cols=29 Identities=34% Similarity=0.491 Sum_probs=22.7
Q ss_pred HHHHcCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 53 VVNHFAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 53 ~~~~l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
.++.....++++.||||||.+|..+|...
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 33333456899999999999999988764
No 145
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.11 E-value=0.0006 Score=53.51 Aligned_cols=49 Identities=16% Similarity=0.317 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 46 YLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 46 ~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
++.-+.++..+.++ .++.+.|+|.||+.+..++..|||.+.++.++...
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 34445556666666 48999999999999999999999999998777644
No 146
>KOG4840|consensus
Probab=97.09 E-value=0.0055 Score=47.36 Aligned_cols=72 Identities=17% Similarity=0.111 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC----ceEEEEEeChhHHHHHHHHH--hCcchhhhHHhh
Q psy16156 18 RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW----TKFIWLGHSLGGQLGTHYAA--MFPQLMDRLILL 91 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhSmGG~ia~~~a~--~~p~~v~~lvli 91 (260)
.|..+-+-++-+ . ..-..+++.+=++|++.++++++. ++++|+|||-|..=.++|.. ..|..|+..|+.
T Consensus 66 ~wslVq~q~~Ss----y-~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlq 140 (299)
T KOG4840|consen 66 SWSLVQPQLRSS----Y-NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQ 140 (299)
T ss_pred cceeeeeecccc----c-cccccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHh
Confidence 477777766521 1 111134566668999999998864 38999999999998888873 357788888887
Q ss_pred ccc
Q psy16156 92 DAM 94 (260)
Q Consensus 92 d~~ 94 (260)
.+.
T Consensus 141 ApV 143 (299)
T KOG4840|consen 141 APV 143 (299)
T ss_pred Ccc
Confidence 544
No 147
>PRK04940 hypothetical protein; Provisional
Probab=97.09 E-value=0.00074 Score=50.91 Aligned_cols=33 Identities=15% Similarity=0.282 Sum_probs=27.5
Q ss_pred ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 60 TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+++.|||+||||+-|.++|.+|. + +.||+|++.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 67999999999999999999987 4 456677553
No 148
>KOG1515|consensus
Probab=97.08 E-value=0.012 Score=49.24 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=55.5
Q ss_pred ccchHhhhccCCC--CCeEEEEcCCCCCCCCCCCCC-CccchhhHHHHHHHHHHH------cCCceEEEEEeChhHHHHH
Q psy16156 5 AASFDKLLPLLPA--RYYYVCIDLPGHGLSSHFPPG-MLLDWLNYLLACHRVVNH------FAWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 5 ~~~w~~~~~~L~~--~y~vi~~Dl~GhG~S~~~~~~-~~~~~~~~a~dl~~~~~~------l~~~~~~lvGhSmGG~ia~ 75 (260)
+..++.+...++. +.-|+.+|.| ++ |+. .+-.+++-.+.+..+.++ .+..++.|+|-|-||.||.
T Consensus 108 ~~~y~~~~~~~a~~~~~vvvSVdYR---LA---PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~ 181 (336)
T KOG1515|consen 108 SPAYDSFCTRLAAELNCVVVSVDYR---LA---PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAH 181 (336)
T ss_pred CchhHHHHHHHHHHcCeEEEecCcc---cC---CCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHH
Confidence 4455555555543 4677888887 22 211 122344555555555553 2457899999999999999
Q ss_pred HHHHhC------cchhhhHHhhcccC
Q psy16156 76 HYAAMF------PQLMDRLILLDAMN 95 (260)
Q Consensus 76 ~~a~~~------p~~v~~lvlid~~~ 95 (260)
.+|.+- +-++++.||+-+..
T Consensus 182 ~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 182 VVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred HHHHHHhhccCCCcceEEEEEEeccc
Confidence 998763 35789999986543
No 149
>PLN02571 triacylglycerol lipase
Probab=97.01 E-value=0.0011 Score=56.52 Aligned_cols=36 Identities=31% Similarity=0.336 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~ 80 (260)
++.++|..+++...-+ ++++.||||||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 5667777888776543 68999999999999998875
No 150
>KOG2281|consensus
Probab=96.97 E-value=0.00083 Score=59.35 Aligned_cols=74 Identities=18% Similarity=0.131 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCCCCCCCCCCCC------CccchhhHHHHHHHHHHHcC---CceEEEEEeChhHHHHHHHHHhCcchhhh
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPG------MLLDWLNYLLACHRVVNHFA---WTKFIWLGHSLGGQLGTHYAAMFPQLMDR 87 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~------~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhSmGG~ia~~~a~~~p~~v~~ 87 (260)
.+|-|+.+|-||-..-...-++ ...++++.++-+.-++++.| ..++.+-|||.||++++....+||+.++.
T Consensus 675 lGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifrv 754 (867)
T KOG2281|consen 675 LGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRV 754 (867)
T ss_pred cceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeE
Confidence 5799999999998765431111 12457788888888888886 46899999999999999999999998876
Q ss_pred HHh
Q psy16156 88 LIL 90 (260)
Q Consensus 88 lvl 90 (260)
.|.
T Consensus 755 AIA 757 (867)
T KOG2281|consen 755 AIA 757 (867)
T ss_pred Eec
Confidence 664
No 151
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.96 E-value=0.011 Score=51.46 Aligned_cols=53 Identities=25% Similarity=0.240 Sum_probs=40.7
Q ss_pred chhhHHHHHHHHHHHc-----CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 42 DWLNYLLACHRVVNHF-----AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 42 ~~~~~a~dl~~~~~~l-----~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
++.+.+....+++++. +..+++|||..-||..++.+|+.+|+.+..+|+-.++
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 4555555445555543 2348999999999999999999999999999987654
No 152
>PLN02454 triacylglycerol lipase
Probab=96.96 E-value=0.0015 Score=55.65 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHHh
Q psy16156 46 YLLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~ 80 (260)
+...|.++++...-+ ++++.||||||.+|+..|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344455556555444 49999999999999998864
No 153
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.91 E-value=0.00023 Score=60.67 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=27.5
Q ss_pred CceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccCC
Q psy16156 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQ 96 (260)
Q Consensus 59 ~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~~ 96 (260)
.+++.++|||+||..+...+... .+++..|++|++..
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~~ 263 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWMF 263 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH--TT--EEEEES---T
T ss_pred hhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCccc
Confidence 56899999999999999877776 88999999998763
No 154
>PLN00413 triacylglycerol lipase
Probab=96.88 E-value=0.0019 Score=55.62 Aligned_cols=35 Identities=34% Similarity=0.528 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
++.+.+.++++.....++++.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45667888888877789999999999999998875
No 155
>KOG4627|consensus
Probab=96.86 E-value=0.0047 Score=47.19 Aligned_cols=81 Identities=16% Similarity=0.180 Sum_probs=54.8
Q ss_pred hhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC-CceEEEEEeChhHHHHHHHHH-hCcchhhh
Q psy16156 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA-WTKFIWLGHSLGGQLGTHYAA-MFPQLMDR 87 (260)
Q Consensus 10 ~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhSmGG~ia~~~a~-~~p~~v~~ 87 (260)
.+-+.+..+|+|..+ |||.+..... ..-++.++..-+.-+++... .+.+.+-|||-|+.+|+.... .+..+|.+
T Consensus 89 iv~~a~~~gY~vasv---gY~l~~q~ht-L~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~g 164 (270)
T KOG4627|consen 89 IVGPAVRRGYRVASV---GYNLCPQVHT-LEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWG 164 (270)
T ss_pred hhhhhhhcCeEEEEe---ccCcCccccc-HHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHH
Confidence 455666678998887 6888864210 11234455555555566553 457888899999999987755 46779999
Q ss_pred HHhhccc
Q psy16156 88 LILLDAM 94 (260)
Q Consensus 88 lvlid~~ 94 (260)
++|..+.
T Consensus 165 l~l~~Gv 171 (270)
T KOG4627|consen 165 LILLCGV 171 (270)
T ss_pred HHHHhhH
Confidence 9998643
No 156
>KOG2183|consensus
Probab=96.82 E-value=0.0044 Score=52.21 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=63.4
Q ss_pred cccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCC-------Ccc-chhhHHHHHHHHHHHcC------CceEEEEEeCh
Q psy16156 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPG-------MLL-DWLNYLLACHRVVNHFA------WTKFIWLGHSL 69 (260)
Q Consensus 4 ~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~-------~~~-~~~~~a~dl~~~~~~l~------~~~~~lvGhSm 69 (260)
+.+.--.++|.|. --+|.+..|=||+|-+.-.. ..| +.++..+|-.+++.++. ..+++.+|-|.
T Consensus 99 ntGFm~D~Ap~~~--AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSY 176 (492)
T KOG2183|consen 99 NTGFMWDLAPELK--ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSY 176 (492)
T ss_pred ccchHHhhhHhhC--ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCch
Confidence 3344445677774 46899999999999642111 112 34455556666666653 24899999999
Q ss_pred hHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 70 GGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 70 GG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
|||+|..+-.+||..|.+.+.-+++
T Consensus 177 GGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 177 GGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hhHHHHHHHhcChhhhhhhhhccCc
Confidence 9999999999999999998876543
No 157
>PLN02162 triacylglycerol lipase
Probab=96.82 E-value=0.0022 Score=55.23 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
++-+.+.++++...-.++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 33455666676666678999999999999998765
No 158
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.77 E-value=0.0063 Score=49.16 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=62.5
Q ss_pred ccccchHhhhccCCCCCeEEEEcC-------CCCCCCCCC---CCCCccchhhHHHHHHHHHHHcCCc--eEEEEEeChh
Q psy16156 3 DNAASFDKLLPLLPARYYYVCIDL-------PGHGLSSHF---PPGMLLDWLNYLLACHRVVNHFAWT--KFIWLGHSLG 70 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~~y~vi~~Dl-------~GhG~S~~~---~~~~~~~~~~~a~dl~~~~~~l~~~--~~~lvGhSmG 70 (260)
++..-|+++++. ++|=|..||- .|.|.+... ..+ .-+...+.+-+..++.+.+++ ++.+.|.|-|
T Consensus 78 ~~~sg~d~lAd~--~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g-~ddVgflr~lva~l~~~~gidp~RVyvtGlS~G 154 (312)
T COG3509 78 LHGTGWDALADR--EGFLVAYPDGYDRAWNANGCGNWFGPADRRRG-VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNG 154 (312)
T ss_pred hcccchhhhhcc--cCcEEECcCccccccCCCcccccCCcccccCC-ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcH
Confidence 456678888885 3699998852 122222110 111 113445555666777777886 8999999999
Q ss_pred HHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 71 GQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 71 G~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
|..+..++..+|+.+.++-.+.+..
T Consensus 155 G~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 155 GRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHhcCcccccceeeeeccc
Confidence 9999999999999998888876543
No 159
>PLN02408 phospholipase A1
Probab=96.73 E-value=0.0025 Score=53.52 Aligned_cols=37 Identities=24% Similarity=0.222 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHHhC
Q psy16156 45 NYLLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~~ 81 (260)
+..+.|..+++..+-+ ++++.||||||.+|...|..-
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445667777766543 599999999999999888753
No 160
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.71 E-value=0.0035 Score=55.37 Aligned_cols=77 Identities=18% Similarity=0.113 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCCccc--hhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhCcchhhhHHhh
Q psy16156 16 PARYYYVCIDLPGHGLSSHFPPGMLLD--WLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 16 ~~~y~vi~~Dl~GhG~S~~~~~~~~~~--~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvli 91 (260)
+.+|-||..|.||-|.|+..-+. .++ ..+ .-|+++++..+-. .+|-.+|-|.+|+..+.+|+..|.-++.++-.
T Consensus 78 a~GYavV~qDvRG~~~SeG~~~~-~~~~E~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~ 155 (563)
T COG2936 78 AQGYAVVNQDVRGRGGSEGVFDP-ESSREAED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPT 155 (563)
T ss_pred cCceEEEEecccccccCCcccce-eccccccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccc
Confidence 46799999999999999863221 122 122 3467777777643 68999999999999999999999998888876
Q ss_pred ccc
Q psy16156 92 DAM 94 (260)
Q Consensus 92 d~~ 94 (260)
.+.
T Consensus 156 ~~~ 158 (563)
T COG2936 156 EGL 158 (563)
T ss_pred ccc
Confidence 543
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=96.70 E-value=0.0046 Score=45.60 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=50.3
Q ss_pred EEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 23 CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 23 ~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
..|-|-++-|..-+ ..++.+.++.|+.++..++-+...|||-|+||+-|.+++.++. ++++++ |++
T Consensus 25 ~~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--irav~~-NPa 90 (191)
T COG3150 25 DEDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRAVVF-NPA 90 (191)
T ss_pred hccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chhhhc-CCC
Confidence 34444455554322 3457888999999999999888999999999999999999987 666664 544
No 162
>KOG1551|consensus
Probab=96.70 E-value=0.017 Score=45.91 Aligned_cols=74 Identities=14% Similarity=0.248 Sum_probs=46.8
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHH--------HHHHH------HcCCceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 18 RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLAC--------HRVVN------HFAWTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl--------~~~~~------~l~~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
+--.+.+.-|=||+... +....++..++.|+ .++.+ +.|..++.|+|-||||.+|...-..++.
T Consensus 141 ~i~tmvle~pfYgqr~p--~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~ 218 (371)
T KOG1551|consen 141 EIATMVLEKPFYGQRVP--EEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQK 218 (371)
T ss_pred cchheeeecccccccCC--HHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCC
Confidence 33445566666776643 21112233344443 33333 4467899999999999999999998888
Q ss_pred hhhhHHhhcc
Q psy16156 84 LMDRLILLDA 93 (260)
Q Consensus 84 ~v~~lvlid~ 93 (260)
-|.-+=++++
T Consensus 219 Pva~~p~l~~ 228 (371)
T KOG1551|consen 219 PVATAPCLNS 228 (371)
T ss_pred Cccccccccc
Confidence 7776666553
No 163
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.69 E-value=0.0019 Score=51.55 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=38.6
Q ss_pred HHHHHHHHHH-c--CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 47 LLACHRVVNH-F--AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 47 a~dl~~~~~~-l--~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
.++|+-++++ . +-++-.++||||||.+++...+.+|+.+...+++++.
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 3455556665 2 3456899999999999999999999999999998654
No 164
>PLN02934 triacylglycerol lipase
Probab=96.56 E-value=0.0041 Score=54.12 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
+....+.++++.....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45667788888877789999999999999998874
No 165
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.55 E-value=0.0089 Score=41.02 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=41.1
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCCCCChHHHHHHHHhhh
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~~e~p~~~~~~i~~fl 259 (260)
..|+|+|.++.|++.+. .......+.+ ++..++.+++ ||-.....-.-+.+.|.+||
T Consensus 34 ~~piL~l~~~~Dp~TP~----~~a~~~~~~l--~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl 91 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPY----EGARAMAARL--PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYL 91 (103)
T ss_pred CCCEEEEecCcCCCCcH----HHHHHHHHHC--CCceEEEEeccCcceecCCChHHHHHHHHHH
Confidence 58999999999997664 2323333344 5789999986 99988644456677777887
No 166
>PLN02310 triacylglycerol lipase
Probab=96.50 E-value=0.0046 Score=52.62 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHcC----CceEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFA----WTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~----~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
++.+.|..+++... ..++++.||||||.+|+..|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666776552 2379999999999999988854
No 167
>COG0627 Predicted esterase [General function prediction only]
Probab=96.50 E-value=0.0024 Score=52.94 Aligned_cols=55 Identities=16% Similarity=0.223 Sum_probs=40.6
Q ss_pred cchhhH-HHHHHHHHH-HcCC----ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 41 LDWLNY-LLACHRVVN-HFAW----TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 41 ~~~~~~-a~dl~~~~~-~l~~----~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
|.++++ ...|-..++ ++.. ++-.++||||||.=|+.+|++||++++++.-+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 555544 345553444 4332 268999999999999999999999999998877543
No 168
>PLN02324 triacylglycerol lipase
Probab=96.48 E-value=0.0046 Score=52.69 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~ 80 (260)
++.+.|..+++...-+ ++++.||||||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4455677777766543 69999999999999988864
No 169
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.43 E-value=0.0058 Score=51.00 Aligned_cols=81 Identities=23% Similarity=0.218 Sum_probs=52.6
Q ss_pred ccchHhhhccCCC-CCeEEEEcCCCC--CCCCCCCCC-----------CccchhhHHHHHHHH------HHHcCCceEEE
Q psy16156 5 AASFDKLLPLLPA-RYYYVCIDLPGH--GLSSHFPPG-----------MLLDWLNYLLACHRV------VNHFAWTKFIW 64 (260)
Q Consensus 5 ~~~w~~~~~~L~~-~y~vi~~Dl~Gh--G~S~~~~~~-----------~~~~~~~~a~dl~~~------~~~l~~~~~~l 64 (260)
-..|+.+++.|+. +|-|.++|.||- |..+....+ ..+++..+.+.|.+. -.+++..++-+
T Consensus 84 ~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv 163 (365)
T COG4188 84 VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGV 163 (365)
T ss_pred ccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEE
Confidence 4567888899986 599999999993 555431111 112233333333332 22345678999
Q ss_pred EEeChhHHHHHHHHHhCcchh
Q psy16156 65 LGHSLGGQLGTHYAAMFPQLM 85 (260)
Q Consensus 65 vGhSmGG~ia~~~a~~~p~~v 85 (260)
+|||+||+.+|..+..+.+..
T Consensus 164 ~GhS~GG~T~m~laGA~~~~~ 184 (365)
T COG4188 164 LGHSFGGYTAMELAGAELDAE 184 (365)
T ss_pred EecccccHHHHHhccccccHH
Confidence 999999999999987765543
No 170
>KOG2624|consensus
Probab=96.40 E-value=0.16 Score=43.73 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=58.9
Q ss_pred CC-CCCeEEEEcCCCCCCCCC---C-CC-CC---ccchhhHHH-HHHHHHHH----cCCceEEEEEeChhHHHHHHHHHh
Q psy16156 15 LP-ARYYYVCIDLPGHGLSSH---F-PP-GM---LLDWLNYLL-ACHRVVNH----FAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 15 L~-~~y~vi~~Dl~GhG~S~~---~-~~-~~---~~~~~~~a~-dl~~~~~~----l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|+ .+|.|..-..||--.|.+ . +. .. .+|+.+++. ||-+.++. =+-++.+.||||-|+.+....+..
T Consensus 102 LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~ 181 (403)
T KOG2624|consen 102 LADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE 181 (403)
T ss_pred HHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcc
Confidence 44 469999999999888853 1 11 11 245555544 55555553 367899999999999999999998
Q ss_pred Ccc---hhhhHHhhcccC
Q psy16156 81 FPQ---LMDRLILLDAMN 95 (260)
Q Consensus 81 ~p~---~v~~lvlid~~~ 95 (260)
.|+ +|+..+++.++.
T Consensus 182 ~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 182 RPEYNKKIKSFIALAPAA 199 (403)
T ss_pred cchhhhhhheeeeecchh
Confidence 877 688888887655
No 171
>PLN02753 triacylglycerol lipase
Probab=96.38 E-value=0.0058 Score=53.41 Aligned_cols=36 Identities=31% Similarity=0.317 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHcCC-----ceEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFAW-----TKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~-----~~~~lvGhSmGG~ia~~~a~~ 80 (260)
++...|..+++..+. .++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344556667766543 489999999999999988854
No 172
>PLN02802 triacylglycerol lipase
Probab=96.36 E-value=0.006 Score=53.10 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHh
Q psy16156 46 YLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 46 ~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+.+.|..+++...- .++++.||||||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 44556667766543 368999999999999988765
No 173
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.31 E-value=0.0058 Score=46.17 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHcC-----CceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccCC
Q psy16156 45 NYLLACHRVVNHFA-----WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQ 96 (260)
Q Consensus 45 ~~a~dl~~~~~~l~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~~ 96 (260)
.-+.+|..|++.|. -.+.+++|||+|+.++-..+...+..+..+|++.|++.
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 44667777777663 34799999999999999888777889999999988763
No 174
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.24 E-value=0.0075 Score=52.65 Aligned_cols=36 Identities=33% Similarity=0.412 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHcC----CceEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFA----WTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~----~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+..++|..+++... -.++++.||||||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34456777776553 2379999999999999988854
No 175
>PLN02719 triacylglycerol lipase
Probab=96.22 E-value=0.008 Score=52.41 Aligned_cols=36 Identities=31% Similarity=0.369 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHcCC-----ceEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFAW-----TKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~-----~~~~lvGhSmGG~ia~~~a~~ 80 (260)
++...|..+++...- .++++.||||||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344556666665532 379999999999999988854
No 176
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.19 E-value=0.065 Score=41.77 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=28.8
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 58 AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 58 ~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+.++++||++|||=.+|..+....| +++-|.|++.+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 4689999999999999988766544 77778888654
No 177
>KOG2182|consensus
Probab=96.19 E-value=0.032 Score=48.36 Aligned_cols=87 Identities=17% Similarity=0.132 Sum_probs=68.5
Q ss_pred chHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCc-----cchhhHHHHHHHHHHHcCC-------ceEEEEEeChhHHHH
Q psy16156 7 SFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGML-----LDWLNYLLACHRVVNHFAW-------TKFIWLGHSLGGQLG 74 (260)
Q Consensus 7 ~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~-----~~~~~~a~dl~~~~~~l~~-------~~~~lvGhSmGG~ia 74 (260)
.|-..+..+. -.|+-+.+|=||+|.+...... .+..+...|+++++++++. .+.+..|-|.-|.++
T Consensus 109 ~~~~~Akkfg--A~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLs 186 (514)
T KOG2182|consen 109 TWLQWAKKFG--ATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLS 186 (514)
T ss_pred hHHHHHHHhC--CeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHH
Confidence 4555555553 4899999999999976443321 2567888999999998863 279999999999999
Q ss_pred HHHHHhCcchhhhHHhhcccC
Q psy16156 75 THYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 75 ~~~a~~~p~~v~~lvlid~~~ 95 (260)
..+-.+||+.|.+-|..+++.
T Consensus 187 AW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 187 AWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHHHHhCchhheeecccccce
Confidence 999999999999988776543
No 178
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.16 E-value=0.007 Score=50.65 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=29.4
Q ss_pred cCCceEEEEEeChhHHHHHHHHHhCcc-----hhhhHHhhcccC
Q psy16156 57 FAWTKFIWLGHSLGGQLGTHYAAMFPQ-----LMDRLILLDAMN 95 (260)
Q Consensus 57 l~~~~~~lvGhSmGG~ia~~~a~~~p~-----~v~~lvlid~~~ 95 (260)
+|..+++|||||||+.|.......-++ .|..++|+.++.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 366789999999999998866544333 378888887554
No 179
>PLN02761 lipase class 3 family protein
Probab=96.12 E-value=0.0094 Score=52.09 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHcC------CceEEEEEeChhHHHHHHHHHh
Q psy16156 45 NYLLACHRVVNHFA------WTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 45 ~~a~dl~~~~~~l~------~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
++...|..+++..+ .-++++.||||||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44556666776652 1379999999999999988753
No 180
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.10 E-value=0.042 Score=48.82 Aligned_cols=77 Identities=16% Similarity=0.061 Sum_probs=51.3
Q ss_pred CeEEEEcCC----CCCCCCCCCCCCccchhhH---HHHHHHHHHHcC--CceEEEEEeChhHHHHHHHHHh--Ccchhhh
Q psy16156 19 YYYVCIDLP----GHGLSSHFPPGMLLDWLNY---LLACHRVVNHFA--WTKFIWLGHSLGGQLGTHYAAM--FPQLMDR 87 (260)
Q Consensus 19 y~vi~~Dl~----GhG~S~~~~~~~~~~~~~~---a~dl~~~~~~l~--~~~~~lvGhSmGG~ia~~~a~~--~p~~v~~ 87 (260)
+-|++++.| |++.+........+.+.+. .+.|.+-++.+| ..+++|+|||-||..++.++.. .+..+++
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~ 205 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHR 205 (493)
T ss_pred EEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHH
Confidence 788899988 5544432111112334433 444555566665 4599999999999999988776 3567999
Q ss_pred HHhhcccC
Q psy16156 88 LILLDAMN 95 (260)
Q Consensus 88 lvlid~~~ 95 (260)
+|++++..
T Consensus 206 ~i~~sg~~ 213 (493)
T cd00312 206 AISQSGSA 213 (493)
T ss_pred HhhhcCCc
Confidence 99998543
No 181
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.06 E-value=0.02 Score=49.53 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=51.7
Q ss_pred CCCeEEEEcCC-CCCCCCCCCCC-CccchhhHHHHHHHHHHHc-------CCceEEEEEeChhHHHHHHHHHh----C--
Q psy16156 17 ARYYYVCIDLP-GHGLSSHFPPG-MLLDWLNYLLACHRVVNHF-------AWTKFIWLGHSLGGQLGTHYAAM----F-- 81 (260)
Q Consensus 17 ~~y~vi~~Dl~-GhG~S~~~~~~-~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhSmGG~ia~~~a~~----~-- 81 (260)
+...++.+|+| |-|.|...... ...+..+.|+|+.+++..+ .-.+++|.|.|.||.-+-.+|.. .
T Consensus 84 ~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~ 163 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKK 163 (415)
T ss_dssp GTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC
T ss_pred cccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccc
Confidence 44789999966 99999653322 2346678888887777755 44589999999999876666543 3
Q ss_pred ----cchhhhHHhhccc
Q psy16156 82 ----PQLMDRLILLDAM 94 (260)
Q Consensus 82 ----p~~v~~lvlid~~ 94 (260)
+=.++++++.|+.
T Consensus 164 ~~~~~inLkGi~IGng~ 180 (415)
T PF00450_consen 164 GDQPKINLKGIAIGNGW 180 (415)
T ss_dssp --STTSEEEEEEEESE-
T ss_pred ccccccccccceecCcc
Confidence 2247888887754
No 182
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.00 E-value=0.0094 Score=48.20 Aligned_cols=48 Identities=15% Similarity=0.176 Sum_probs=39.8
Q ss_pred HHHHH-HHHHHcCCc--eEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 47 LLACH-RVVNHFAWT--KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 47 a~dl~-~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
.+-+. .+.++.+|+ ++.++|.|+||+-++.++.++|+.+.+.++|.+.
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 33333 466677774 8999999999999999999999999999999754
No 183
>KOG3101|consensus
Probab=96.00 E-value=0.00079 Score=51.47 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=40.0
Q ss_pred cchhhHHH-HHHHHHHH----cCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 41 LDWLNYLL-ACHRVVNH----FAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 41 ~~~~~~a~-dl~~~~~~----l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
|-|.+|+- .|-+++.. +...++-|.||||||.=|+..+++.|.+.+++-...+.+
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 55565542 34444441 224579999999999999999999999999988776544
No 184
>PLN02847 triacylglycerol lipase
Probab=95.91 E-value=0.015 Score=51.61 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=21.8
Q ss_pred HHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 53 VVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 53 ~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
.++...--+++++||||||.+|..++..
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3344444589999999999999988765
No 185
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.89 E-value=0.0097 Score=45.28 Aligned_cols=51 Identities=14% Similarity=0.106 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh------CcchhhhHHhhccc
Q psy16156 44 LNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM------FPQLMDRLILLDAM 94 (260)
Q Consensus 44 ~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~------~p~~v~~lvlid~~ 94 (260)
....+.+.+.....--.+++|+|+|.|+.|+..++.. ..++|.++|++.-+
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 3444555555566566799999999999999999877 34567777777543
No 186
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.81 E-value=0.018 Score=47.87 Aligned_cols=63 Identities=13% Similarity=0.020 Sum_probs=40.3
Q ss_pred CCeEEEEcCCCCCCCCCC---CCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 18 RYYYVCIDLPGHGLSSHF---PPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~---~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
...+|.+-.|--|.--.. .+...|+-..++.-|..+.+..+.++++|++||||.++.+....+
T Consensus 146 ~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 146 DGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred CcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHH
Confidence 356677777766543211 111234444555555566666678899999999999999976543
No 187
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.78 E-value=0.15 Score=43.21 Aligned_cols=43 Identities=19% Similarity=0.126 Sum_probs=34.7
Q ss_pred HHHHHHHHHc---CCceEEEEEeChhHHHHHHHHHhCcchhhhHHhh
Q psy16156 48 LACHRVVNHF---AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 48 ~dl~~~~~~l---~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvli 91 (260)
+-+.+++++. ++++|++.|.|==|..++..|+ -.+||.+++=+
T Consensus 157 D~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~ 202 (367)
T PF10142_consen 157 DAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPI 202 (367)
T ss_pred HHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeE
Confidence 3455666665 7899999999999999999888 67898887654
No 188
>KOG3253|consensus
Probab=95.73 E-value=0.016 Score=51.29 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=46.4
Q ss_pred chHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHH--------HHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 7 SFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACH--------RVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 7 ~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~--------~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
.|...+....+.-.|-++|++---.- -.+...++-++ ++-.++...+++|||.|||+.|+....
T Consensus 197 ~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVS 268 (784)
T KOG3253|consen 197 SWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVS 268 (784)
T ss_pred hHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEec
Confidence 46655555554456777887743111 12223333333 333455667999999999988887776
Q ss_pred HhCc-chhhhHHhhc
Q psy16156 79 AMFP-QLMDRLILLD 92 (260)
Q Consensus 79 ~~~p-~~v~~lvlid 92 (260)
.... ..|+.+|.|+
T Consensus 269 psnsdv~V~~vVCig 283 (784)
T KOG3253|consen 269 PSNSDVEVDAVVCIG 283 (784)
T ss_pred cccCCceEEEEEEec
Confidence 5433 3477777663
No 189
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.61 E-value=0.032 Score=43.15 Aligned_cols=39 Identities=18% Similarity=0.136 Sum_probs=30.9
Q ss_pred hhhHHHHHHHHHHHcCC-ceEEEEEeChhHHHHHHHHHhC
Q psy16156 43 WLNYLLACHRVVNHFAW-TKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~-~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
..+..+....++++.+- ++++|+|||-|+++..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34555666777777764 5999999999999999998775
No 190
>KOG4569|consensus
Probab=95.45 E-value=0.027 Score=47.36 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 44 LNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 44 ~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
..+.+++..+++...--++++-||||||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4667888899999887799999999999999988764
No 191
>KOG2551|consensus
Probab=95.43 E-value=0.037 Score=42.93 Aligned_cols=60 Identities=17% Similarity=0.087 Sum_probs=39.4
Q ss_pred HHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcCCCCCCCCChHHHHHHHHhhh
Q psy16156 192 IIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 192 ~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 259 (260)
....+++|+|-|.|+.|.+++. .......... ++..++.=+|||.++-.+ ...+.|.+|+
T Consensus 158 ~~~~i~~PSLHi~G~~D~iv~~----~~s~~L~~~~--~~a~vl~HpggH~VP~~~--~~~~~i~~fi 217 (230)
T KOG2551|consen 158 YKRPLSTPSLHIFGETDTIVPS----ERSEQLAESF--KDATVLEHPGGHIVPNKA--KYKEKIADFI 217 (230)
T ss_pred hccCCCCCeeEEecccceeecc----hHHHHHHHhc--CCCeEEecCCCccCCCch--HHHHHHHHHH
Confidence 3468999999999999997764 2222233334 355444446899998766 4445566665
No 192
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.35 E-value=0.029 Score=46.65 Aligned_cols=47 Identities=23% Similarity=0.372 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc-hhhhHHhhcccC
Q psy16156 49 ACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ-LMDRLILLDAMN 95 (260)
Q Consensus 49 dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~-~v~~lvlid~~~ 95 (260)
.+.+++...+..+++||||++|+..+..|....+. .+++||+|++..
T Consensus 182 Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 182 AAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 34455556666779999999999999999887765 699999998765
No 193
>KOG4372|consensus
Probab=95.26 E-value=0.011 Score=49.87 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=47.0
Q ss_pred cccchHhhhccCCCCCeEEEEcCCCC-CCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHH
Q psy16156 4 NAASFDKLLPLLPARYYYVCIDLPGH-GLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 4 ~~~~w~~~~~~L~~~y~vi~~Dl~Gh-G~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~ 76 (260)
+...|...+...++.+.=..+..+|+ |.+..+..|..+==...++++.+.+....++++..||||+||.++-.
T Consensus 93 ~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 93 DMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLGGLVARY 166 (405)
T ss_pred cHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeecCCeeeeE
Confidence 45667777777765543335555555 33333223332222366777777777778999999999999998763
No 194
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.12 E-value=0.011 Score=48.02 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=30.0
Q ss_pred eEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 61 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
.-+|.|-|+||.+++..+.+||+++..++.-++.
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 4689999999999999999999999988876543
No 195
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.94 E-value=0.11 Score=43.56 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=45.7
Q ss_pred CeEEEEcCC-CCCCCCCCCCCCccch-hhHHHHHHHHHHH----c---CCceEEEEEeChhHHHHHHHHHh----Cc---
Q psy16156 19 YYYVCIDLP-GHGLSSHFPPGMLLDW-LNYLLACHRVVNH----F---AWTKFIWLGHSLGGQLGTHYAAM----FP--- 82 (260)
Q Consensus 19 y~vi~~Dl~-GhG~S~~~~~~~~~~~-~~~a~dl~~~~~~----l---~~~~~~lvGhSmGG~ia~~~a~~----~p--- 82 (260)
..++.+|.| |-|-|-...+. .+.- ...|+|+..++.. + .-.+++|.|-|.||.-+-.+|.. ..
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~-~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPI-DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCC-CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccccc
Confidence 368999999 88998542221 2221 1334565555554 2 34689999999999866655543 11
Q ss_pred ---chhhhHHhhcc
Q psy16156 83 ---QLMDRLILLDA 93 (260)
Q Consensus 83 ---~~v~~lvlid~ 93 (260)
=.++|+++-|+
T Consensus 81 ~~~inLkGi~IGNg 94 (319)
T PLN02213 81 EPPINLQGYMLGNP 94 (319)
T ss_pred CCceeeeEEEeCCC
Confidence 14677777664
No 196
>KOG3975|consensus
Probab=94.86 E-value=0.17 Score=40.09 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=54.9
Q ss_pred hccCCCCCeEEEEcCCCCCCCCC---C-C---CCCccchhhHHHHHHHHHHHcC--CceEEEEEeChhHHHHHHHHHh-C
Q psy16156 12 LPLLPARYYYVCIDLPGHGLSSH---F-P---PGMLLDWLNYLLACHRVVNHFA--WTKFIWLGHSLGGQLGTHYAAM-F 81 (260)
Q Consensus 12 ~~~L~~~y~vi~~Dl~GhG~S~~---~-~---~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhSmGG~ia~~~a~~-~ 81 (260)
...|-++.+++.+-.-||-.-.. . + ...-|++++.++.=.++++..- -.+++++|||.|+++.+.+..- .
T Consensus 53 ~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k 132 (301)
T KOG3975|consen 53 HLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIK 132 (301)
T ss_pred HHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcc
Confidence 33444557788888888855431 0 0 1124788888887778888763 4689999999999999988763 2
Q ss_pred cc-hhhhHHhh
Q psy16156 82 PQ-LMDRLILL 91 (260)
Q Consensus 82 p~-~v~~lvli 91 (260)
++ .|.+.+++
T Consensus 133 ~~~~vqKa~~L 143 (301)
T KOG3975|consen 133 LVFSVQKAVLL 143 (301)
T ss_pred cccceEEEEEe
Confidence 22 47777665
No 197
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.76 E-value=0.21 Score=43.55 Aligned_cols=52 Identities=19% Similarity=0.140 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHh--CcchhhhHHhhcccCC
Q psy16156 45 NYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAM--FPQLMDRLILLDAMNQ 96 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~--~p~~v~~lvlid~~~~ 96 (260)
...+.+.+-|+++|- +.++|.|+|-||+.++.+.+. ....++++|+.++.+.
T Consensus 163 lALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 163 LALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 335577888889974 689999999999998877654 3447999999987654
No 198
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.76 E-value=0.069 Score=42.36 Aligned_cols=79 Identities=19% Similarity=0.166 Sum_probs=49.8
Q ss_pred cchHhhhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHH--------HHHHHHHHcCC----ceEEEEEeChhHH
Q psy16156 6 ASFDKLLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLL--------ACHRVVNHFAW----TKFIWLGHSLGGQ 72 (260)
Q Consensus 6 ~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~--------dl~~~~~~l~~----~~~~lvGhSmGG~ 72 (260)
-+|+.+.+.|++ +|.|||.=.. .+ ++=...|+ -+.++.+.-+. -++.-||||||+.
T Consensus 34 itYr~lLe~La~~Gy~ViAtPy~---------~t--fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGck 102 (250)
T PF07082_consen 34 ITYRYLLERLADRGYAVIATPYV---------VT--FDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCK 102 (250)
T ss_pred HHHHHHHHHHHhCCcEEEEEecC---------CC--CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchH
Confidence 467888888875 5999987321 11 11112222 22233333222 2567899999999
Q ss_pred HHHHHHHhCcchhhhHHhhcccC
Q psy16156 73 LGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 73 ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+-+.+...++..-++.|+|+-..
T Consensus 103 lhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 103 LHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred HHHHHhhhccCcccceEEEecCC
Confidence 99998888876667888886443
No 199
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.55 E-value=0.12 Score=42.88 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=45.8
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHH---cC--CceEEEEEeChhHHHHHHHHHhCcc----hhhh
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH---FA--WTKFIWLGHSLGGQLGTHYAAMFPQ----LMDR 87 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~---l~--~~~~~lvGhSmGG~ia~~~a~~~p~----~v~~ 87 (260)
.++.|+.+|.|=--+-. .+..+++..+-+..+.++ ++ .+++.++|+|-||.+|+.++..-.+ ...+
T Consensus 109 ~g~~vv~vdYrlaPe~~-----~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~ 183 (312)
T COG0657 109 AGAVVVSVDYRLAPEHP-----FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAA 183 (312)
T ss_pred cCCEEEecCCCCCCCCC-----CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceE
Confidence 46999999998332221 112233433333333333 44 4789999999999999999987654 3556
Q ss_pred HHhhccc
Q psy16156 88 LILLDAM 94 (260)
Q Consensus 88 lvlid~~ 94 (260)
.+++.+.
T Consensus 184 ~~li~P~ 190 (312)
T COG0657 184 QVLISPL 190 (312)
T ss_pred EEEEecc
Confidence 6666443
No 200
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.35 E-value=0.041 Score=43.07 Aligned_cols=38 Identities=18% Similarity=-0.047 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 43 WLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
+.+..+.|.+.+++.|. =.-|+|.|.||.+|..++...
T Consensus 86 ~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~ 123 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQ 123 (212)
T ss_dssp -HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHH
Confidence 55667777778877663 235999999999999888653
No 201
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.26 E-value=0.053 Score=44.46 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=32.3
Q ss_pred ceEEEEEeChhHHHHHHHHHhCcc--hhhhHHhhcccC
Q psy16156 60 TKFIWLGHSLGGQLGTHYAAMFPQ--LMDRLILLDAMN 95 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~~~a~~~p~--~v~~lvlid~~~ 95 (260)
+-+++||+|-||.++-.++.+.|+ .|+.+|-++++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 469999999999999999999998 599999998654
No 202
>KOG2112|consensus
Probab=94.05 E-value=0.15 Score=39.14 Aligned_cols=87 Identities=16% Similarity=0.234 Sum_probs=57.3
Q ss_pred ccccchHhhhccCC-CCCeEEEE-------------------cCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc---CC
Q psy16156 3 DNAASFDKLLPLLP-ARYYYVCI-------------------DLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF---AW 59 (260)
Q Consensus 3 ~~~~~w~~~~~~L~-~~y~vi~~-------------------Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l---~~ 59 (260)
|++..|..++..|. ++-+-|+| |..+.+.+.. + ..-++...++-+.+++++. |+
T Consensus 14 Dsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~--~-d~~~~~~aa~~i~~Li~~e~~~Gi 90 (206)
T KOG2112|consen 14 DSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAP--E-DEEGLHRAADNIANLIDNEPANGI 90 (206)
T ss_pred CCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccc--h-hhhHHHHHHHHHHHHHHHHHHcCC
Confidence 56667776666665 34556665 3333322221 1 1224556677788888765 43
Q ss_pred --ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhc
Q psy16156 60 --TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD 92 (260)
Q Consensus 60 --~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid 92 (260)
.++.+-|-||||++|++.+..+|..+.+..-..
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s 125 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPKALGGIFALS 125 (206)
T ss_pred CccceeEcccCchHHHHHHHHhccccccceeeccc
Confidence 578999999999999999999988877766554
No 203
>PLN02606 palmitoyl-protein thioesterase
Probab=93.71 E-value=0.072 Score=43.65 Aligned_cols=36 Identities=8% Similarity=0.085 Sum_probs=32.3
Q ss_pred ceEEEEEeChhHHHHHHHHHhCcc--hhhhHHhhcccC
Q psy16156 60 TKFIWLGHSLGGQLGTHYAAMFPQ--LMDRLILLDAMN 95 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~~~a~~~p~--~v~~lvlid~~~ 95 (260)
+-+++||+|-||.++-.++.+.|+ .|+.+|-++++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 469999999999999999999998 499999998654
No 204
>KOG2100|consensus
Probab=93.70 E-value=0.14 Score=48.01 Aligned_cols=89 Identities=13% Similarity=0.120 Sum_probs=61.7
Q ss_pred ccchHhhhccCCCCCeEEEEcCCCCCCCCCC-----C-CCCccchhhHHHHHHHHHHHcCC--ceEEEEEeChhHHHHHH
Q psy16156 5 AASFDKLLPLLPARYYYVCIDLPGHGLSSHF-----P-PGMLLDWLNYLLACHRVVNHFAW--TKFIWLGHSLGGQLGTH 76 (260)
Q Consensus 5 ~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~-----~-~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~ 76 (260)
...|..++- -..++-|+.+|-||-|-.... + .....++.+....+..+++..-+ +++.|.|+|.||++++.
T Consensus 546 ~~~~~~~~~-s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~ 624 (755)
T KOG2100|consen 546 SVDWNEVVV-SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLK 624 (755)
T ss_pred EecHHHHhh-ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHH
Confidence 345666621 134689999999998766531 1 11124556666666666665533 58999999999999999
Q ss_pred HHHhCcchhhhH-Hhhccc
Q psy16156 77 YAAMFPQLMDRL-ILLDAM 94 (260)
Q Consensus 77 ~a~~~p~~v~~l-vlid~~ 94 (260)
.+..+|+.+.+. +.+++.
T Consensus 625 ~l~~~~~~~fkcgvavaPV 643 (755)
T KOG2100|consen 625 LLESDPGDVFKCGVAVAPV 643 (755)
T ss_pred HhhhCcCceEEEEEEecce
Confidence 999999877776 766543
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=93.63 E-value=0.14 Score=43.44 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=45.6
Q ss_pred hhccCCC-CCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc----CCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 11 LLPLLPA-RYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF----AWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 11 ~~~~L~~-~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
+...|++ ++.||.+|-.=|=-|.+. .++.++|+..+++.. |..++.|+|+|.|+=|--....+-|
T Consensus 279 v~~~l~~~gvpVvGvdsLRYfW~~rt-------Pe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 279 VAEALQKQGVPVVGVDSLRYFWSERT-------PEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHHCCCceeeeehhhhhhccCC-------HHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 5677765 599999995555445442 446677877777754 6689999999999987654444433
No 206
>KOG3847|consensus
Probab=93.15 E-value=0.02 Score=46.69 Aligned_cols=42 Identities=21% Similarity=0.239 Sum_probs=30.5
Q ss_pred HHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 53 VVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 53 ~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+-..++-.++.++|||+||+.+...... -.+++.-|++|.+-
T Consensus 234 ~K~nl~~s~~aViGHSFGgAT~i~~ss~-~t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 234 LKGNLDTSQAAVIGHSFGGATSIASSSS-HTDFRCAIALDAWM 275 (399)
T ss_pred Hhcchhhhhhhheeccccchhhhhhhcc-ccceeeeeeeeeee
Confidence 3334444578999999999988765544 35688888899764
No 207
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.09 E-value=0.11 Score=44.27 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=39.6
Q ss_pred ccchhhHHHHHHHHHH---Hc---CC-ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 40 LLDWLNYLLACHRVVN---HF---AW-TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 40 ~~~~~~~a~dl~~~~~---~l---~~-~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
.|++++..+-+.++.. .+ +. -+++++|+|.||++|...|.-.|-.++++|=.++.+
T Consensus 157 N~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 157 NFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 4566654444333333 22 22 389999999999999999999999999987655443
No 208
>KOG2029|consensus
Probab=92.30 E-value=0.25 Score=43.91 Aligned_cols=16 Identities=44% Similarity=1.126 Sum_probs=13.1
Q ss_pred ceEEEEEeChhHHHHH
Q psy16156 60 TKFIWLGHSLGGQLGT 75 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~ 75 (260)
.++++|||||||..+=
T Consensus 526 RPivwI~HSmGGLl~K 541 (697)
T KOG2029|consen 526 RPIVWIGHSMGGLLAK 541 (697)
T ss_pred CceEEEecccchHHHH
Confidence 5899999999995443
No 209
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=91.72 E-value=0.45 Score=41.57 Aligned_cols=77 Identities=14% Similarity=0.096 Sum_probs=46.6
Q ss_pred CCCeEEEEc-CCCCCCCCCCCCCCccchh-hHHHHHHHHHHH----c---CCceEEEEEeChhHHHHHHHHHh----C--
Q psy16156 17 ARYYYVCID-LPGHGLSSHFPPGMLLDWL-NYLLACHRVVNH----F---AWTKFIWLGHSLGGQLGTHYAAM----F-- 81 (260)
Q Consensus 17 ~~y~vi~~D-l~GhG~S~~~~~~~~~~~~-~~a~dl~~~~~~----l---~~~~~~lvGhSmGG~ia~~~a~~----~-- 81 (260)
+...++.+| ..|.|.|....+. .++-+ +.|+|+.+++.. . .-.+++|.|.|.||.-+-.+|.. .
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~-~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~ 192 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPI-DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 192 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCC-CccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhccc
Confidence 457899999 6789999642221 12111 223555554443 3 23579999999999865555543 1
Q ss_pred ----cchhhhHHhhccc
Q psy16156 82 ----PQLMDRLILLDAM 94 (260)
Q Consensus 82 ----p~~v~~lvlid~~ 94 (260)
+=.++++++-|+.
T Consensus 193 ~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 193 CCEPPINLQGYMLGNPV 209 (433)
T ss_pred ccCCcccceeeEecCCC
Confidence 1146788877653
No 210
>PLN02209 serine carboxypeptidase
Probab=90.69 E-value=0.7 Score=40.45 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=46.9
Q ss_pred CCCeEEEEc-CCCCCCCCCCCCCCccchhhHHHHHHHHHHHc-------CCceEEEEEeChhHHHHHHHHHh----Cc--
Q psy16156 17 ARYYYVCID-LPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF-------AWTKFIWLGHSLGGQLGTHYAAM----FP-- 82 (260)
Q Consensus 17 ~~y~vi~~D-l~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhSmGG~ia~~~a~~----~p-- 82 (260)
+...++.+| ..|.|.|-...+....+-.+.++|+.+++..+ .-.+++|.|.|.||.-+-.+|.. ..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~ 195 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYIC 195 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccc
Confidence 457899999 66889985322111112223456666655543 23489999999999755555432 21
Q ss_pred ----chhhhHHhhccc
Q psy16156 83 ----QLMDRLILLDAM 94 (260)
Q Consensus 83 ----~~v~~lvlid~~ 94 (260)
=.++++++.|+.
T Consensus 196 ~~~~inl~Gi~igng~ 211 (437)
T PLN02209 196 CNPPINLQGYVLGNPI 211 (437)
T ss_pred cCCceeeeeEEecCcc
Confidence 146777777653
No 211
>PRK10279 hypothetical protein; Provisional
Probab=90.51 E-value=0.42 Score=39.55 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhH
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRL 88 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~l 88 (260)
+.-+. .+++.|+..-.++|-|+|+.+|..||..+.+.+..+
T Consensus 21 iGVL~-aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~~~ 61 (300)
T PRK10279 21 IGVIN-ALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDW 61 (300)
T ss_pred HHHHH-HHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHHHH
Confidence 33444 444578998999999999999999998776554443
No 212
>KOG3043|consensus
Probab=90.41 E-value=0.75 Score=35.98 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=31.5
Q ss_pred HHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCC
Q psy16156 192 IIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDME 244 (260)
Q Consensus 192 ~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~ 244 (260)
..+.+++|+|++.|+.|..++.... ....+.++....-+.+++++++ ||-..
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v-~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDV-KAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHH-HHHHHHHhcCcccceeEEEcCCccchhh
Confidence 4678899999999999987665111 0112233322111246888887 77654
No 213
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.74 E-value=0.56 Score=38.01 Aligned_cols=28 Identities=25% Similarity=0.440 Sum_probs=22.4
Q ss_pred HHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 55 NHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 55 ~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
+..--.++.|-|||+||.+|..+-.++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334568999999999999998877764
No 214
>KOG4540|consensus
Probab=89.74 E-value=0.56 Score=38.01 Aligned_cols=28 Identities=25% Similarity=0.440 Sum_probs=22.4
Q ss_pred HHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 55 NHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 55 ~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
+..--.++.|-|||+||.+|..+-.++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334568999999999999998877764
No 215
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.40 E-value=2.6 Score=33.34 Aligned_cols=39 Identities=10% Similarity=0.027 Sum_probs=27.0
Q ss_pred chhhHHHHHHHHHHHc--CCceEEEEEeChhHHHHHHHHHh
Q psy16156 42 DWLNYLLACHRVVNHF--AWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 42 ~~~~~a~dl~~~~~~l--~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
|+.+=++.+.+.++.. .-++++++|+|.|+.||...+.+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 3444445555555542 23689999999999999987765
No 216
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.02 E-value=0.21 Score=37.29 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=32.1
Q ss_pred CceEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 59 ~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
..+.++-|-||||+-|..+..+||+...++|.+++.
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 356788999999999999999999999999988654
No 217
>KOG3967|consensus
Probab=88.97 E-value=0.28 Score=37.92 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=51.0
Q ss_pred CCCCeEEEEcC---CCCCCCCCCCCCC-ccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc--hhhhHH
Q psy16156 16 PARYYYVCIDL---PGHGLSSHFPPGM-LLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ--LMDRLI 89 (260)
Q Consensus 16 ~~~y~vi~~Dl---~GhG~S~~~~~~~-~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~--~v~~lv 89 (260)
+.+|-||...- |-+-++...|-.. ........--...++.-...+.+.+|.||.||..-+.+..++|+ +|-++.
T Consensus 142 ~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aia 221 (297)
T KOG3967|consen 142 AEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIA 221 (297)
T ss_pred HcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEE
Confidence 35688887642 2233332212111 11223333344566666678899999999999999999999876 688888
Q ss_pred hhccc
Q psy16156 90 LLDAM 94 (260)
Q Consensus 90 lid~~ 94 (260)
|-|++
T Consensus 222 lTDs~ 226 (297)
T KOG3967|consen 222 LTDSA 226 (297)
T ss_pred eeccc
Confidence 88866
No 218
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=88.39 E-value=0.38 Score=40.21 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=25.2
Q ss_pred HHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 50 CHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 50 l~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
+.++++..|+++-.++|||+|=+.|+..|-
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 567778889999999999999888886654
No 219
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=88.30 E-value=1.5 Score=35.50 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=37.7
Q ss_pred HHHHhcc-ccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-CCCCCCCCChH---HHHHHHHhhh
Q psy16156 191 SIIRNIQ-CQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-SGHDMELEEPE---KLSGLISDFL 259 (260)
Q Consensus 191 ~~~~~i~-~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~gH~~~~e~p~---~~~~~i~~fl 259 (260)
..+.++. +|+|+++|.+|..++. ....+........+.+...++ ++|......+. +..+.+.+|+
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~----~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~ 294 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPL----RDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFL 294 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccch----hhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHH
Confidence 3455666 7999999999987764 233333333321124555555 57887754443 4444555665
No 220
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=88.20 E-value=0.65 Score=37.77 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=28.5
Q ss_pred ceEEEEEeChhHHHHHHHHHhCcc-hhhhHHhhcccC
Q psy16156 60 TKFIWLGHSLGGQLGTHYAAMFPQ-LMDRLILLDAMN 95 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~~~a~~~p~-~v~~lvlid~~~ 95 (260)
+-+++||+|-||.+.-.++.++|+ .|+.+|-++++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 569999999999999999999976 699999988654
No 221
>KOG2541|consensus
Probab=88.11 E-value=1.2 Score=35.83 Aligned_cols=80 Identities=20% Similarity=0.291 Sum_probs=49.5
Q ss_pred hHhhhccCCCCCeEEEEcCCCCC--CCCCCCCCCccchhhHHHHHHHHHHHcC--CceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 8 FDKLLPLLPARYYYVCIDLPGHG--LSSHFPPGMLLDWLNYLLACHRVVNHFA--WTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 8 w~~~~~~L~~~y~vi~~Dl~GhG--~S~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
+..++..++ +..|+++|. |-| .|.- -.+.+.++-+.+.+.... -+-+++||.|-||.+|-.++...|+
T Consensus 44 ~~q~l~~~~-g~~v~~lei-g~g~~~s~l------~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 44 LTQLLEELP-GSPVYCLEI-GDGIKDSSL------MPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred HHHHHHhCC-CCeeEEEEe-cCCcchhhh------ccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCC
Confidence 344444454 467888885 445 2221 113333433333333221 2569999999999999999998766
Q ss_pred -hhhhHHhhcccC
Q psy16156 84 -LMDRLILLDAMN 95 (260)
Q Consensus 84 -~v~~lvlid~~~ 95 (260)
.|+.+|-++++.
T Consensus 116 ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 116 PPVKNFISLGGPH 128 (296)
T ss_pred CCcceeEeccCCc
Confidence 588888887654
No 222
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=87.93 E-value=0.66 Score=38.23 Aligned_cols=31 Identities=23% Similarity=0.218 Sum_probs=25.4
Q ss_pred HHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 50 CHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 50 l~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+.+++..+|+++-.++|||+|-+.|+..+-.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 4456678899999999999999998876643
No 223
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=87.48 E-value=0.51 Score=41.67 Aligned_cols=63 Identities=19% Similarity=0.271 Sum_probs=43.2
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhh-------------h--h-CC---------C-----CcEEEEEc-CCCCCCC
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCL-------------Y--S-RH---------P-----KFHVEMVD-SGHDMEL 245 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~-------------~--~-~~---------p-----~~~~~~~~-~gH~~~~ 245 (260)
.+++|+..|+.|.+++..-.+.... .++ . . .. . +..++.+. +||+++.
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~-~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~ 442 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTL-ALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM 442 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHH-hCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh
Confidence 5899999999998766532222211 111 0 0 00 1 45667776 6999999
Q ss_pred CChHHHHHHHHhhhC
Q psy16156 246 EEPEKLSGLISDFLD 260 (260)
Q Consensus 246 e~p~~~~~~i~~fl~ 260 (260)
++|+...+.|.+|+.
T Consensus 443 d~P~~~~~~i~~fl~ 457 (462)
T PTZ00472 443 DQPAVALTMINRFLR 457 (462)
T ss_pred hHHHHHHHHHHHHHc
Confidence 999999999999974
No 224
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=87.08 E-value=0.9 Score=41.12 Aligned_cols=50 Identities=24% Similarity=0.349 Sum_probs=41.1
Q ss_pred chhhHHHHHHHHHHHcC--CceEEEEEeChhHHHHHHHHHhCcchhhhHHhh
Q psy16156 42 DWLNYLLACHRVVNHFA--WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 42 ~~~~~a~dl~~~~~~l~--~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvli 91 (260)
++.++++....|++.-- -+.+.++|-|-||++.-..|-..|+.++++|+-
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~ 558 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQ 558 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeec
Confidence 56777777666666532 257999999999999999999999999999975
No 225
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=86.93 E-value=0.82 Score=37.70 Aligned_cols=31 Identities=16% Similarity=0.044 Sum_probs=25.4
Q ss_pred HHHHHHHcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 50 CHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 50 l~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
+.+++...|+++..++|||+|-+.|...+-.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 4566778899999999999999888877643
No 226
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=86.36 E-value=1.3 Score=35.20 Aligned_cols=64 Identities=14% Similarity=0.177 Sum_probs=43.7
Q ss_pred HhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCC-CCChHHHHHHHHhhh
Q psy16156 194 RNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDME-LEEPEKLSGLISDFL 259 (260)
Q Consensus 194 ~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~-~e~p~~~~~~i~~fl 259 (260)
...++|-|+|.++.|.++++...++. .+..+... -+++.+.+++ +|..| -++|++-.++|.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~-~~~~~~~G-~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEH-AEEARRKG-WDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHH-HHHHHHcC-CeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 45568999999999998776322222 22333322 2455566664 79976 599999999999885
No 227
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=86.35 E-value=0.97 Score=37.56 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=27.7
Q ss_pred HHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 51 HRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 51 ~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
.+.+++.|++.-.|.|-|||+.||..||..+.+
T Consensus 30 l~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 30 LKALEEAGIPIDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred HHHHHHcCCCccEEEecCHHHHHHHHHHcCCCh
Confidence 355667789999999999999999999997544
No 228
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=86.22 E-value=1 Score=37.39 Aligned_cols=64 Identities=16% Similarity=0.179 Sum_probs=40.9
Q ss_pred cchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 6 ASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 6 ~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
..|++++..|...-.-++++ . |..-.+ ..+.-| ..+++.|+.--.++|-|+|+.+|..||..++
T Consensus 2 ~d~~rl~r~l~~~~~gLvL~-------G----GG~RG~-ahiGvL-~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 2 SDFSRLARVLTGNSIALVLG-------G----GGARGC-AHIGVI-KALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred ChHHHHHHHhcCCCEEEEEC-------C----hHHHHH-HHHHHH-HHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 46778888887654444442 1 111111 223333 4445558888899999999999999998753
No 229
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=86.22 E-value=0.76 Score=40.69 Aligned_cols=83 Identities=20% Similarity=0.233 Sum_probs=54.5
Q ss_pred hhccCCCCCeEEEEcCCCCCCCCC---CCCCCc------c---chhhHHHHHHHHHHHc---CCceEEEEEeChhHHHHH
Q psy16156 11 LLPLLPARYYYVCIDLPGHGLSSH---FPPGML------L---DWLNYLLACHRVVNHF---AWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 11 ~~~~L~~~y~vi~~Dl~GhG~S~~---~~~~~~------~---~~~~~a~dl~~~~~~l---~~~~~~lvGhSmGG~ia~ 75 (260)
+...|+.+|-+++=| =||..+.. ...+.+ | ++...+.--+++++.+ ..+.-...|.|-||.=++
T Consensus 52 ~~~~~~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 455677788888777 47755532 111111 1 1222223334555544 456789999999999999
Q ss_pred HHHHhCcchhhhHHhhccc
Q psy16156 76 HYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 76 ~~a~~~p~~v~~lvlid~~ 94 (260)
..|.+||+..+++|.-.++
T Consensus 131 ~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHhChhhcCeEEeCCch
Confidence 9999999999999876543
No 230
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=86.19 E-value=0.87 Score=37.32 Aligned_cols=32 Identities=19% Similarity=0.042 Sum_probs=25.2
Q ss_pred HHHHHHHcC-CceEEEEEeChhHHHHHHHHHhC
Q psy16156 50 CHRVVNHFA-WTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 50 l~~~~~~l~-~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
+..++...| +++..++|||+|=+.|+..|-..
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 345566777 99999999999999888777543
No 231
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=85.64 E-value=3.3 Score=35.34 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=50.3
Q ss_pred CeEEEEcCCCCC---CCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHh--Ccc---hhhhHHh
Q psy16156 19 YYYVCIDLPGHG---LSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAM--FPQ---LMDRLIL 90 (260)
Q Consensus 19 y~vi~~Dl~GhG---~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~--~p~---~v~~lvl 90 (260)
-.++++|..--. .+.. .++-+.+.++--..+++..|.+.++|+|-|-||.+++.+... .+. .=+++||
T Consensus 155 ~SILvLDYsLt~~~~~~~~----yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iL 230 (374)
T PF10340_consen 155 VSILVLDYSLTSSDEHGHK----YPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAIL 230 (374)
T ss_pred CeEEEEeccccccccCCCc----CchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEE
Confidence 377788765433 1111 223355777777788877899999999999999999987653 211 2468888
Q ss_pred hcccC
Q psy16156 91 LDAMN 95 (260)
Q Consensus 91 id~~~ 95 (260)
|+++.
T Consensus 231 ISPWv 235 (374)
T PF10340_consen 231 ISPWV 235 (374)
T ss_pred ECCCc
Confidence 88765
No 232
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=85.30 E-value=1.1 Score=39.24 Aligned_cols=75 Identities=20% Similarity=0.182 Sum_probs=46.4
Q ss_pred CeEEEEc-CCCCCCCCCCCCCCccchhhHHHHHHHHHHHc-------C--CceEEEEEeChhHHHHHHHHHhCcc---hh
Q psy16156 19 YYYVCID-LPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF-------A--WTKFIWLGHSLGGQLGTHYAAMFPQ---LM 85 (260)
Q Consensus 19 y~vi~~D-l~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l-------~--~~~~~lvGhSmGG~ia~~~a~~~p~---~v 85 (260)
-.+|.+| --|-|-|....+...-++.....|+..+.+.+ . ..+.+|+|-|.||.=+-.+|..--+ ..
T Consensus 147 adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~ 226 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL 226 (498)
T ss_pred CceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc
Confidence 4689999 56889887421222234445555655554432 2 2589999999999888777754222 35
Q ss_pred hhHHhhcc
Q psy16156 86 DRLILLDA 93 (260)
Q Consensus 86 ~~lvlid~ 93 (260)
+++|++.+
T Consensus 227 ~~~~nlss 234 (498)
T COG2939 227 NGNVNLSS 234 (498)
T ss_pred CCceEeee
Confidence 55655543
No 233
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=84.92 E-value=1.3 Score=38.60 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
+.-+.++.++ |+.+-+++|-|.|+.||..+|...++++..++.
T Consensus 89 iGVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~eel~~~l~ 131 (421)
T cd07230 89 IGVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEEIPELLE 131 (421)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHHH
Confidence 4555555544 777779999999999999999988888766654
No 234
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=84.79 E-value=2.9 Score=32.43 Aligned_cols=52 Identities=17% Similarity=0.186 Sum_probs=40.1
Q ss_pred eEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeCh----hHHHHHHHHHhC
Q psy16156 20 YYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSL----GGQLGTHYAAMF 81 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSm----GG~ia~~~a~~~ 81 (260)
+|+..|.++.. .|+.+.+++.+.+++++.+ -.++|+|||- |+.++-++|.+-
T Consensus 79 ~V~~~~~~~~~---------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 79 RAILVSDRAFA---------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred EEEEEeccccc---------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 67766644322 3567788999999998887 6799999999 889999988873
No 235
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=84.51 E-value=1.5 Score=32.96 Aligned_cols=37 Identities=14% Similarity=-0.094 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcch
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQL 84 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~ 84 (260)
+.-+.++.+ .++..-.++|-|+|+.+|..+|...+.+
T Consensus 14 ~Gvl~aL~e-~gi~~d~v~GtSaGAi~aa~~a~g~~~~ 50 (172)
T cd07198 14 VGVAKALRE-RGPLIDIIAGTSAGAIVAALLASGRDLE 50 (172)
T ss_pred HHHHHHHHH-cCCCCCEEEEECHHHHHHHHHHcCCCHH
Confidence 334444444 4788889999999999999999976443
No 236
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=83.71 E-value=2.2 Score=38.15 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=39.2
Q ss_pred ccchhhH---HHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHHHhC--cchhhhHHhhccc
Q psy16156 40 LLDWLNY---LLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYAAMF--PQLMDRLILLDAM 94 (260)
Q Consensus 40 ~~~~~~~---a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a~~~--p~~v~~lvlid~~ 94 (260)
.+.+.|. .+.|.+=|..+|- ++++|.|||-||..+......- ...+++.|+.++.
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 3554443 4456777777874 5899999999999888776652 3479999998864
No 237
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=83.66 E-value=1.7 Score=35.44 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
+.-+.++ ++.|+.-=.++|-|+|+.+|..||..+
T Consensus 26 iGVL~aL-eE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 26 IGILQAL-EEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHH-HHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 3344444 666888889999999999999999874
No 238
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=82.92 E-value=1.9 Score=37.06 Aligned_cols=43 Identities=12% Similarity=0.006 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
+..++++ .+.|+.+=+|.|-|.|+.||..+|...++.+..+..
T Consensus 99 ~Gv~kaL-~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 99 LGVVKAL-WLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHHHHH-HHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 4444444 445888888999999999999999987888877765
No 239
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=82.53 E-value=1.5 Score=39.41 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=26.4
Q ss_pred HHHHH-HHcCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 50 CHRVV-NHFAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 50 l~~~~-~~l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
+.+++ +.+|+++-.++|||||=+.|+..|--.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 44556 588999999999999999998887654
No 240
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=82.43 E-value=2.7 Score=32.81 Aligned_cols=50 Identities=16% Similarity=0.094 Sum_probs=26.1
Q ss_pred HhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcCCCCCCCCCh
Q psy16156 194 RNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGHDMELEEP 248 (260)
Q Consensus 194 ~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~gH~~~~e~p 248 (260)
.+|++|||-|+|.+|..+++. ......+... +..+++..++||.++...+
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~----~s~~L~~~~~-~~~~v~~h~gGH~vP~~~~ 207 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPE----RSEALAEMFD-PDARVIEHDGGHHVPRKKE 207 (212)
T ss_dssp TT---EEEEEEETT-SSS-HH----HHHHHHHHHH-HHEEEEEESSSSS----HH
T ss_pred ccCCCCeEEEEeCCCCCcchH----HHHHHHHhcc-CCcEEEEECCCCcCcCChh
Confidence 678999999999999987641 2222233332 1256666778999987654
No 241
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=82.37 E-value=2 Score=32.83 Aligned_cols=42 Identities=14% Similarity=0.073 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc-chhhhHH
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP-QLMDRLI 89 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p-~~v~~lv 89 (260)
+.-+.++ ++.++..=.++|-|.||.+|..+|..++ +.+..++
T Consensus 15 ~Gvl~~L-~e~~~~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~ 57 (194)
T cd07207 15 IGALKAL-EEAGILKKRVAGTSAGAITAALLALGYSAADIKDIL 57 (194)
T ss_pred HHHHHHH-HHcCCCcceEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 3444444 4457777899999999999999998654 4454444
No 242
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=81.76 E-value=0.78 Score=39.66 Aligned_cols=70 Identities=16% Similarity=0.204 Sum_probs=43.1
Q ss_pred HHHHHHHhccccEEEEEeCCCCcchhhcchhhHHHHhh-----------h-----------hCCCCcEEEEEc-CCCCCC
Q psy16156 188 QQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCL-----------Y-----------SRHPKFHVEMVD-SGHDME 244 (260)
Q Consensus 188 ~~~~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~-----------~-----------~~~p~~~~~~~~-~gH~~~ 244 (260)
.....+.+ .+++|+..|+.|.+++..-.+..+ +.+. . .. .+..++.+. +||+++
T Consensus 322 ~l~~lL~~-~irVLiy~Gd~D~i~n~~Gt~~~i-~~L~w~~~~~f~~~~~~~~~~~~G~~k~~-~~ltf~~V~~AGHmvP 398 (415)
T PF00450_consen 322 DLPELLDN-GIRVLIYNGDLDLICNFLGTERWI-DNLNWSGKDGFRQWPRKVNGQVAGYVKQY-GNLTFVTVRGAGHMVP 398 (415)
T ss_dssp HHHHHHHT-T-EEEEEEETT-SSS-HHHHHHHH-HCTECTEEEEEEEEEEETTCSEEEEEEEE-TTEEEEEETT--SSHH
T ss_pred hhhhhhhc-cceeEEeccCCCEEEEeccchhhh-hccccCcccccccccccccccccceeEEe-ccEEEEEEcCCcccCh
Confidence 33444443 389999999999987753222221 1111 0 01 246778887 599999
Q ss_pred CCChHHHHHHHHhhhC
Q psy16156 245 LEEPEKLSGLISDFLD 260 (260)
Q Consensus 245 ~e~p~~~~~~i~~fl~ 260 (260)
.++|+...+.|.+|++
T Consensus 399 ~dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 399 QDQPEAALQMFRRFLK 414 (415)
T ss_dssp HHSHHHHHHHHHHHHC
T ss_pred hhCHHHHHHHHHHHhc
Confidence 9999999999999985
No 243
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=81.46 E-value=2.3 Score=35.32 Aligned_cols=43 Identities=14% Similarity=0.147 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLI 89 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 89 (260)
.+..++++.++ |+.+-++.|-|.|+.+|..++...++.+..+.
T Consensus 83 h~GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 83 HVGVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 34555555554 88878899999999999999998787887766
No 244
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=80.93 E-value=2.4 Score=36.84 Aligned_cols=44 Identities=9% Similarity=0.101 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
.+..+.++.++ |+.+=+++|-|.|+.+|..+|...++++..++.
T Consensus 82 h~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~~~ 125 (407)
T cd07232 82 HFGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHHh
Confidence 35566666665 777778999999999999999988888877754
No 245
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=80.86 E-value=2.8 Score=33.09 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
+.-+.++. +.+++.-.++|-|.|+.+|..+|..++
T Consensus 16 ~GvL~aL~-e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 16 LGFLAALL-EMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHH-HcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 33444444 447777789999999999999997653
No 246
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=80.44 E-value=2.9 Score=32.79 Aligned_cols=34 Identities=21% Similarity=0.085 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc
Q psy16156 48 LACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 48 ~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
.-+.++. +.++.-=.++|.|+|+.+|..+|...+
T Consensus 15 Gvl~aL~-e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALA-EAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHH-HcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3344444 457777799999999999999999885
No 247
>KOG1282|consensus
Probab=79.36 E-value=6.8 Score=34.48 Aligned_cols=64 Identities=14% Similarity=0.198 Sum_probs=42.8
Q ss_pred ccccEEEEEeCCCCcchhhcchhhHHHHhhh---------hCC-----------CCcEEEEEc-CCCCCCCCChHHHHHH
Q psy16156 196 IQCQTLCILSQDSFNRVWIVNENYIGTYCLY---------SRH-----------PKFHVEMVD-SGHDMELEEPEKLSGL 254 (260)
Q Consensus 196 i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~---------~~~-----------p~~~~~~~~-~gH~~~~e~p~~~~~~ 254 (260)
-..|++|..|+.|.+++.......+ +.+.. +.+ .+..++.+. +||+++..+|+.....
T Consensus 362 ~~~rvliysGD~D~~~p~~gt~~~i-~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m 440 (454)
T KOG1282|consen 362 GGYRVLIYSGDHDLVVPFLGTQAWI-KSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIM 440 (454)
T ss_pred CceEEEEEeCCcceeCcchhhHHHH-HhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHH
Confidence 3479999999999987764322211 11110 000 124456776 5999999999999999
Q ss_pred HHhhhC
Q psy16156 255 ISDFLD 260 (260)
Q Consensus 255 i~~fl~ 260 (260)
+.+|+.
T Consensus 441 ~~~fl~ 446 (454)
T KOG1282|consen 441 FQRFLN 446 (454)
T ss_pred HHHHHc
Confidence 999974
No 248
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=78.07 E-value=3.6 Score=33.02 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=26.7
Q ss_pred HHHHHHHHHHcCCc---eE-EEEEeChhHHHHHHHHHhCcchhhhH
Q psy16156 47 LLACHRVVNHFAWT---KF-IWLGHSLGGQLGTHYAAMFPQLMDRL 88 (260)
Q Consensus 47 a~dl~~~~~~l~~~---~~-~lvGhSmGG~ia~~~a~~~p~~v~~l 88 (260)
+..+..+.+ .|+. ++ .++|-|+|+.+|..||. .|+++..+
T Consensus 15 iGVl~~L~e-~g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~~~~ 58 (246)
T cd07222 15 LGAAKALLR-HGKKLLKRVKRFAGASAGSLVAAVLLT-APEKIEEC 58 (246)
T ss_pred HHHHHHHHH-cCchhhccCCEEEEECHHHHHHHHHhc-ChHHHHHH
Confidence 344444544 4543 33 89999999999999994 46555443
No 249
>KOG1283|consensus
Probab=77.68 E-value=5.5 Score=33.12 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=51.0
Q ss_pred eEEEEcCC-CCCCCCCC-CCCCccchhhHHHHHHHHHHHc-------CCceEEEEEeChhHHHHHHHHHhCcc-------
Q psy16156 20 YYVCIDLP-GHGLSSHF-PPGMLLDWLNYLLACHRVVNHF-------AWTKFIWLGHSLGGQLGTHYAAMFPQ------- 83 (260)
Q Consensus 20 ~vi~~Dl~-GhG~S~~~-~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhSmGG~ia~~~a~~~p~------- 83 (260)
.++.+|-| |-|.|--. ...+.-+..+.|.|+.++++.+ +-.+++|+-.|.||-+|..+|..--+
T Consensus 73 dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i 152 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEI 152 (414)
T ss_pred cEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCce
Confidence 46677765 78888531 1112224668899999999865 23489999999999999888765322
Q ss_pred --hhhhHHhhccc
Q psy16156 84 --LMDRLILLDAM 94 (260)
Q Consensus 84 --~v~~lvlid~~ 94 (260)
...+++|=|+.
T Consensus 153 ~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 153 KLNFIGVALGDSW 165 (414)
T ss_pred eecceeEEccCcc
Confidence 24566666654
No 250
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=77.21 E-value=4.6 Score=30.43 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcch
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQL 84 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~ 84 (260)
+.-+.++ ++.++.-=.++|-|.|+.+|..+|..++.+
T Consensus 16 ~Gvl~~L-~e~g~~~d~i~GtSaGAi~aa~~a~g~~~~ 52 (175)
T cd07228 16 IGVLRAL-EEEGIEIDIIAGSSIGALVGALYAAGHLDA 52 (175)
T ss_pred HHHHHHH-HHCCCCeeEEEEeCHHHHHHHHHHcCCCHH
Confidence 3444445 445777789999999999999999876543
No 251
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=76.56 E-value=0.71 Score=39.50 Aligned_cols=73 Identities=23% Similarity=0.245 Sum_probs=59.5
Q ss_pred eEEEEcCCCCCCCCCCCC-CCccchhhHHHHHHHHHHHcC---CceEEEEEeChhHHHHHHHHHhCcchhhhHHhhc
Q psy16156 20 YYVCIDLPGHGLSSHFPP-GMLLDWLNYLLACHRVVNHFA---WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD 92 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~~~~-~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid 92 (260)
+-+.+..|=||.|.+.|. ....++.+.|+|.+++++++. -++.+=-|-|=||+.++.+=.-||+-|++.|---
T Consensus 90 NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 90 NQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred ceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 457899999999976432 223468899999999999985 2578888999999999999989999999888753
No 252
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=75.40 E-value=4.7 Score=33.63 Aligned_cols=34 Identities=15% Similarity=-0.045 Sum_probs=23.3
Q ss_pred HHHHHHHHHcCCc----eEEEEEeChhHHHHHHHHHhC
Q psy16156 48 LACHRVVNHFAWT----KFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 48 ~dl~~~~~~l~~~----~~~lvGhSmGG~ia~~~a~~~ 81 (260)
.-|.++-+.+|.. -=.++|.|+||.||..+|..+
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 3344444445642 126899999999999999754
No 253
>KOG3043|consensus
Probab=74.56 E-value=1.5 Score=34.41 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=46.9
Q ss_pred hhhccCCC-CCeEEEEcCC-CCCCCCCCC-CC-----CccchhhHHHHHH---HHHHHcC-CceEEEEEeChhHHHHHHH
Q psy16156 10 KLLPLLPA-RYYYVCIDLP-GHGLSSHFP-PG-----MLLDWLNYLLACH---RVVNHFA-WTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 10 ~~~~~L~~-~y~vi~~Dl~-GhG~S~~~~-~~-----~~~~~~~~a~dl~---~~~~~l~-~~~~~lvGhSmGG~ia~~~ 77 (260)
..++.++. +|.|+.||+- |-=.|...+ .. ...+.+..-.++. ++++..| .+++=++|..|||.++..+
T Consensus 58 ~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~ 137 (242)
T KOG3043|consen 58 EGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTL 137 (242)
T ss_pred HHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEe
Confidence 44556654 6999999975 411121100 00 0112222223333 3444445 6789999999999999988
Q ss_pred HHhCcchhhhHHhh
Q psy16156 78 AAMFPQLMDRLILL 91 (260)
Q Consensus 78 a~~~p~~v~~lvli 91 (260)
-...| .+.+.+..
T Consensus 138 ~~~~~-~f~a~v~~ 150 (242)
T KOG3043|consen 138 SAKDP-EFDAGVSF 150 (242)
T ss_pred eccch-hheeeeEe
Confidence 88877 55555543
No 254
>KOG1516|consensus
Probab=74.00 E-value=10 Score=34.26 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=39.7
Q ss_pred ccchhhH---HHHHHHHHHHcC--CceEEEEEeChhHHHHHHHHHh--CcchhhhHHhhcccC
Q psy16156 40 LLDWLNY---LLACHRVVNHFA--WTKFIWLGHSLGGQLGTHYAAM--FPQLMDRLILLDAMN 95 (260)
Q Consensus 40 ~~~~~~~---a~dl~~~~~~l~--~~~~~lvGhSmGG~ia~~~a~~--~p~~v~~lvlid~~~ 95 (260)
.+.+.+. .+.+..-+..+| .++++|+|||-||..+..+..- ....+.+.|.+++..
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 3544433 344566666665 5799999999999999877653 235788999988654
No 255
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=73.12 E-value=7.2 Score=31.22 Aligned_cols=41 Identities=12% Similarity=-0.006 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCc--e--EEEEEeChhHHHHHHHHHhCc-chhhhH
Q psy16156 47 LLACHRVVNHFAWT--K--FIWLGHSLGGQLGTHYAAMFP-QLMDRL 88 (260)
Q Consensus 47 a~dl~~~~~~l~~~--~--~~lvGhSmGG~ia~~~a~~~p-~~v~~l 88 (260)
+..+..+.++ ++. + -.++|-|.|+.+|..||...+ +.+...
T Consensus 15 ~GVl~~L~e~-g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~ 60 (243)
T cd07204 15 VGVASALREH-APRLLQNARRIAGASAGAIVAAVVLCGVSMEEACSF 60 (243)
T ss_pred HHHHHHHHHc-CcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHH
Confidence 3444455544 543 2 389999999999999999765 554433
No 256
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=72.89 E-value=7 Score=31.07 Aligned_cols=36 Identities=14% Similarity=0.013 Sum_probs=26.7
Q ss_pred HHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHHhCcc
Q psy16156 47 LLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 47 a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
+.-+..+.+ .|+. .-.++|-|.|+.+|..||...+.
T Consensus 15 ~GVl~~L~e-~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 15 LGVLSLLIE-AGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHHH-cCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 444555554 4665 34899999999999999997654
No 257
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=72.25 E-value=12 Score=29.92 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=33.0
Q ss_pred HHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCCCC
Q psy16156 193 IRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDMELE 246 (260)
Q Consensus 193 ~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~~e 246 (260)
..++++|+|++.|+.|..++..... ...+.+.... .+++++.+++ .|..+-+
T Consensus 154 ~~~~~~pvl~~~~~~D~~~p~~~~~-~~~~~~~~~~-~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 154 APKIKVPVLLHLAGEDPYIPAADVD-ALAAALEDAG-VKVDLEIYPGAGHGFAND 206 (236)
T ss_pred cccccCcEEEEecccCCCCChhHHH-HHHHHHHhcC-CCeeEEEeCCCccccccC
Confidence 5699999999999999876652111 1122222221 1577888886 5877644
No 258
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=72.11 E-value=7.2 Score=31.31 Aligned_cols=41 Identities=12% Similarity=-0.052 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcC-CceEEEEEeChhHHHHHHHHHhCc-chhhh
Q psy16156 47 LLACHRVVNHFA-WTKFIWLGHSLGGQLGTHYAAMFP-QLMDR 87 (260)
Q Consensus 47 a~dl~~~~~~l~-~~~~~lvGhSmGG~ia~~~a~~~p-~~v~~ 87 (260)
+.-+..+.++-. +..-.+.|-|+|+.+|..+|...+ +++..
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~~~~~~~ 58 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLPLGEMTS 58 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCcHHHHHH
Confidence 444555555521 223349999999999999998755 45443
No 259
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=71.51 E-value=13 Score=27.54 Aligned_cols=53 Identities=19% Similarity=0.231 Sum_probs=34.4
Q ss_pred hHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChh
Q psy16156 8 FDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLG 70 (260)
Q Consensus 8 w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmG 70 (260)
...+...+.++-.+|++|-.| ..++..++|+-+..+...-.-+=+.+||-|.|
T Consensus 57 ~~~il~~i~~~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 57 GERILKKIPPNDYVILLDERG----------KQLSSEEFAKKLERWMNQGKSDIVFIIGGADG 109 (155)
T ss_dssp HHHHHCTSHTTSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB
T ss_pred HHHHHhhccCCCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCceEEEEEecCCC
Confidence 345667777777899998554 34666788888777776633355788999988
No 260
>KOG2237|consensus
Probab=70.97 E-value=8 Score=35.24 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCCCCCCCC--CCCC----ccchhhHHHHHHHHHHHc--CCceEEEEEeChhHHHHHHHHHhCcchhhhHH
Q psy16156 18 RYYYVCIDLPGHGLSSHF--PPGM----LLDWLNYLLACHRVVNHF--AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLI 89 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~~--~~~~----~~~~~~~a~dl~~~~~~l--~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 89 (260)
++-....|.||=|+=+.. ..|. .-+++++..-.+-+++.- ...+..+.|.|-||.++...+-++|+.++.+|
T Consensus 499 G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avi 578 (712)
T KOG2237|consen 499 GWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVI 578 (712)
T ss_pred ceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhh
Confidence 343445589997755420 1121 124555555544554431 23589999999999999999999999999998
Q ss_pred hh
Q psy16156 90 LL 91 (260)
Q Consensus 90 li 91 (260)
+-
T Consensus 579 a~ 580 (712)
T KOG2237|consen 579 AK 580 (712)
T ss_pred hc
Confidence 74
No 261
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=70.64 E-value=6.4 Score=30.28 Aligned_cols=42 Identities=12% Similarity=-0.049 Sum_probs=27.1
Q ss_pred ccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCC
Q psy16156 198 CQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDM 243 (260)
Q Consensus 198 ~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~ 243 (260)
.||+++.|++|...+.. . ...+.+++.. -+++++.+++ +|..
T Consensus 167 Pp~~i~~g~~D~l~~~~--~-~~~~~L~~~g-v~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVDDS--L-RFAEKLKKAG-VDVELHVYPGMPHGF 209 (211)
T ss_dssp HEEEEEEETTSTTHHHH--H-HHHHHHHHTT--EEEEEEETTEETTG
T ss_pred CCeeeeccccccchHHH--H-HHHHHHHHCC-CCEEEEEECCCeEEe
Confidence 39999999999875431 1 2244455543 2567788886 6864
No 262
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=69.88 E-value=8.8 Score=28.77 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCc-chhhhH
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFP-QLMDRL 88 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p-~~v~~l 88 (260)
+.-+.++. +.++..-.++|-|.|+.+|..++.... +.+...
T Consensus 16 ~Gvl~~L~-~~~~~~d~i~GtSaGal~a~~~a~g~~~~~~~~~ 57 (175)
T cd07205 16 IGVLKALE-EAGIPIDIVSGTSAGAIVGALYAAGYSPEEIEER 57 (175)
T ss_pred HHHHHHHH-HcCCCeeEEEEECHHHHHHHHHHcCCCHHHHHHH
Confidence 33444443 446777799999999999999997653 344443
No 263
>KOG2385|consensus
Probab=69.46 E-value=5.3 Score=35.36 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=28.8
Q ss_pred HcCCceEEEEEeChhHHHHHHHHHh-----CcchhhhHHhhcccC
Q psy16156 56 HFAWTKFIWLGHSLGGQLGTHYAAM-----FPQLMDRLILLDAMN 95 (260)
Q Consensus 56 ~l~~~~~~lvGhSmGG~ia~~~a~~-----~p~~v~~lvlid~~~ 95 (260)
.+|..+++|||.|+|+.+...-... .-..|.-+||+.+|.
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 4578899999999999998843332 223577788887554
No 264
>KOG1202|consensus
Probab=69.23 E-value=7.8 Score=38.24 Aligned_cols=70 Identities=23% Similarity=0.155 Sum_probs=44.1
Q ss_pred cCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC-CceEEEEEeChhHHHHHHHHHh--CcchhhhHHhhcccC
Q psy16156 25 DLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA-WTKFIWLGHSLGGQLGTHYAAM--FPQLMDRLILLDAMN 95 (260)
Q Consensus 25 Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhSmGG~ia~~~a~~--~p~~v~~lvlid~~~ 95 (260)
..|-||.-.... -..-++++.|.--..-++.+. ..++.|+|+|+|+-+|..+|.. ..+....+|++|+.+
T Consensus 2147 e~PaYglQ~T~~-vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2147 EIPAYGLQCTEA-VPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred CCcchhhhcccc-CCcchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 345666543211 111346666654444444444 4689999999999999999865 344566699999653
No 265
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=68.98 E-value=9.8 Score=30.80 Aligned_cols=40 Identities=13% Similarity=-0.039 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCc-eEEEEEeChhHHHHHHHHHhCcchhhh
Q psy16156 47 LLACHRVVNHFAWT-KFIWLGHSLGGQLGTHYAAMFPQLMDR 87 (260)
Q Consensus 47 a~dl~~~~~~l~~~-~~~lvGhSmGG~ia~~~a~~~p~~v~~ 87 (260)
+.-+.++.+. ++. -=.++|-|.|+.+|..++...+.+...
T Consensus 14 ~Gvl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~~~~~~ 54 (266)
T cd07208 14 AGVLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQRGRALR 54 (266)
T ss_pred HHHHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCcchHHH
Confidence 3444444444 555 448999999999999999987665443
No 266
>KOG1282|consensus
Probab=68.90 E-value=13 Score=32.85 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=37.9
Q ss_pred CeEEEEcCC-CCCCCCCCCC-CCccchhhHHHHHHHHHHH----c---CCceEEEEEeChhHHHHHHHHHh
Q psy16156 19 YYYVCIDLP-GHGLSSHFPP-GMLLDWLNYLLACHRVVNH----F---AWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 19 y~vi~~Dl~-GhG~S~~~~~-~~~~~~~~~a~dl~~~~~~----l---~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
-.++.+|.| |-|-|-...+ ....+-+..|.|+.+++.. + .-.++.|.|-|.+|...-.+|..
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 468899988 7788753111 1111223456665555543 3 34689999999999665555543
No 267
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=68.89 E-value=9.5 Score=30.77 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCc----eEEEEEeChhHHHHHHHHHhCc-chhhhHH
Q psy16156 47 LLACHRVVNHFAWT----KFIWLGHSLGGQLGTHYAAMFP-QLMDRLI 89 (260)
Q Consensus 47 a~dl~~~~~~l~~~----~~~lvGhSmGG~ia~~~a~~~p-~~v~~lv 89 (260)
+.-+..+.++ ++. .-.++|-|.|+.+|..||...+ +++...+
T Consensus 16 ~GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~ 62 (252)
T cd07221 16 VGVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLPLDQILQIL 62 (252)
T ss_pred HHHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHH
Confidence 4455555555 443 3469999999999999998766 5555543
No 268
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=67.72 E-value=3.4 Score=30.69 Aligned_cols=49 Identities=16% Similarity=0.097 Sum_probs=28.6
Q ss_pred EcCCCCCCCCCCCC-CCccchhhHHHHH----HHHHHHcC----CceEEEEEeChhHH
Q psy16156 24 IDLPGHGLSSHFPP-GMLLDWLNYLLAC----HRVVNHFA----WTKFIWLGHSLGGQ 72 (260)
Q Consensus 24 ~Dl~GhG~S~~~~~-~~~~~~~~~a~dl----~~~~~~l~----~~~~~lvGhSmGG~ 72 (260)
+-+-|||....... -..++..++|.-+ ..+.+..+ .++++|||.||+..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 45679998832111 1135677888877 45555543 46899999999977
No 269
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=66.18 E-value=8.1 Score=32.35 Aligned_cols=61 Identities=11% Similarity=0.211 Sum_probs=41.6
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhh---------------------hhCCCCcEEEEEc-CCCCCCCCChHHHHHH
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCL---------------------YSRHPKFHVEMVD-SGHDMELEEPEKLSGL 254 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~---------------------~~~~p~~~~~~~~-~gH~~~~e~p~~~~~~ 254 (260)
.+++|+..|+.|.++++.-.+... +.++ ... .+.+++.+. +||+++ .+|+...+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi-~~L~w~~~~~~~~w~~~~~~~G~vk~y~-~~ltf~~V~~AGHmV~-~qP~~al~m 309 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWI-RSLNYSPIHNWRPWMINNQIAGYTRAYS-NKMTFATIKAGGHTAE-YRPNETFIM 309 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHH-HhcCCCCCCCCccccCCCEeeeEEEEec-CcceEEEEcCCCCCCC-cCHHHHHHH
Confidence 479999999999776653222221 1111 111 137777776 699997 599999999
Q ss_pred HHhhhC
Q psy16156 255 ISDFLD 260 (260)
Q Consensus 255 i~~fl~ 260 (260)
+.+|++
T Consensus 310 ~~~fi~ 315 (319)
T PLN02213 310 FQRWIS 315 (319)
T ss_pred HHHHHc
Confidence 999974
No 270
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=65.84 E-value=8.3 Score=26.19 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=51.8
Q ss_pred cchHhhhccCCC-CCeEEEEcCCCCCCCCC--CCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhH--HHHHHHHHh
Q psy16156 6 ASFDKLLPLLPA-RYYYVCIDLPGHGLSSH--FPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGG--QLGTHYAAM 80 (260)
Q Consensus 6 ~~w~~~~~~L~~-~y~vi~~Dl~GhG~S~~--~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG--~ia~~~a~~ 80 (260)
+.|..+...|.. +|--=.+.|+..|.+-. ...+.. ..=..-+..+++.+--.+++|||-|=-. -+-..+|.+
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~---~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAE---EHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCCch---hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHH
Confidence 345555555544 36555677887766532 111111 1224567789999988999999987544 344467888
Q ss_pred CcchhhhHH
Q psy16156 81 FPQLMDRLI 89 (260)
Q Consensus 81 ~p~~v~~lv 89 (260)
||++|.++.
T Consensus 88 ~P~~i~ai~ 96 (100)
T PF09949_consen 88 FPGRILAIY 96 (100)
T ss_pred CCCCEEEEE
Confidence 999998764
No 271
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=65.03 E-value=9.9 Score=31.46 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchh
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLM 85 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v 85 (260)
+.-+.++.+ .++..-++.|-|.|+.+|..++....+++
T Consensus 85 ~Gvl~aL~e-~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 85 LGVVKALWE-QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHHH-cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 455556655 46777789999999999999999876665
No 272
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=64.02 E-value=23 Score=26.08 Aligned_cols=50 Identities=20% Similarity=0.316 Sum_probs=32.6
Q ss_pred hhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChh
Q psy16156 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLG 70 (260)
Q Consensus 10 ~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmG 70 (260)
++.+.+.++-+||+.|.+|=- ++.+++|+.+..+-+. |-+=..+||-|.|
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~----------~sSe~fA~~l~~~~~~-G~~i~f~IGG~~G 108 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKA----------LSSEEFADFLERLRDD-GRDISFLIGGADG 108 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCc----------CChHHHHHHHHHHHhc-CCeEEEEEeCccc
Confidence 456778877789999988643 3444666555544433 4334677888887
No 273
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=60.74 E-value=17 Score=27.75 Aligned_cols=40 Identities=28% Similarity=0.263 Sum_probs=24.3
Q ss_pred eEEEEcCCCCCCCCCCCCC-C-cc--ch-hhHHHHHHHHHHHcCCc
Q psy16156 20 YYVCIDLPGHGLSSHFPPG-M-LL--DW-LNYLLACHRVVNHFAWT 60 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~~~~~-~-~~--~~-~~~a~dl~~~~~~l~~~ 60 (260)
++|++| ||||-++.-..+ . .. ++ .+++.-+...++..|.+
T Consensus 1 k~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~~ 45 (189)
T TIGR02883 1 KIIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGAL 45 (189)
T ss_pred CEEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCE
Confidence 468888 999987642111 0 11 22 25667777888887754
No 274
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=60.29 E-value=36 Score=25.23 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=29.2
Q ss_pred hhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCC-ceEEEEEeChh
Q psy16156 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW-TKFIWLGHSLG 70 (260)
Q Consensus 11 ~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhSmG 70 (260)
+...++.+-.+|++|-+|- .++..++|+-+...... |. +=+.+||-+.|
T Consensus 60 il~~l~~~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~-g~~~i~F~IGGa~G 109 (157)
T PRK00103 60 ILAALPKGARVIALDERGK----------QLSSEEFAQELERWRDD-GRSDVAFVIGGADG 109 (157)
T ss_pred HHhhCCCCCEEEEEcCCCC----------cCCHHHHHHHHHHHHhc-CCccEEEEEcCccc
Confidence 3445555556888886542 35556777766666333 33 45677777766
No 275
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=57.63 E-value=30 Score=27.98 Aligned_cols=47 Identities=11% Similarity=-0.096 Sum_probs=26.4
Q ss_pred HHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCC---cEEEEEcCCCC
Q psy16156 191 SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPK---FHVEMVDSGHD 242 (260)
Q Consensus 191 ~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~gH~ 242 (260)
..+.++++|+|++.|..|..... .. .+.++....+. .+++.-|.+|.
T Consensus 222 ~~~~~i~vP~l~v~Gw~D~~~~~----~~-~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 222 ERLDKIDVPVLIVGGWYDTLFLR----GA-LRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp HHHGG--SEEEEEEETTCSSTSH----HH-HHHHHHHCTTSTC-EEEEEESESTT
T ss_pred HHHhhCCCCEEEecccCCcccch----HH-HHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 34699999999999999943222 11 23334333223 25655567885
No 276
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=57.61 E-value=24 Score=28.66 Aligned_cols=45 Identities=13% Similarity=-0.060 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhh
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvli 91 (260)
|..|.+++...++.=--++|-|+|+.-+..|..+.+.+-++.++-
T Consensus 27 AGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~~ 71 (292)
T COG4667 27 AGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRVIVE 71 (292)
T ss_pred HHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHHHHH
Confidence 567778886655544468899999999999999999999988873
No 277
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=56.84 E-value=11 Score=33.37 Aligned_cols=39 Identities=18% Similarity=0.271 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHcCCc--eEEEEEeChhHHHHHHHHHh-Ccc
Q psy16156 45 NYLLACHRVVNHFAWT--KFIWLGHSLGGQLGTHYAAM-FPQ 83 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~--~~~lvGhSmGG~ia~~~a~~-~p~ 83 (260)
...+-|.+-++.||.. ..+|-|-|||.+=|+.|++. .|.
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 5566778888899874 79999999999999999886 454
No 278
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=56.46 E-value=11 Score=31.74 Aligned_cols=29 Identities=17% Similarity=0.088 Sum_probs=20.2
Q ss_pred HHHHHcCCce------EEEEEeChhHHHHHHHHHh
Q psy16156 52 RVVNHFAWTK------FIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 52 ~~~~~l~~~~------~~lvGhSmGG~ia~~~a~~ 80 (260)
+++...|+.. -.++|||+|=+.|+..|-.
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHhCC
Confidence 4455666432 3579999999998887744
No 279
>COG0218 Predicted GTPase [General function prediction only]
Probab=55.89 E-value=18 Score=27.97 Aligned_cols=15 Identities=33% Similarity=0.521 Sum_probs=12.6
Q ss_pred eEEEEcCCCCCCCCC
Q psy16156 20 YYVCIDLPGHGLSSH 34 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~ 34 (260)
.+..+||||||...-
T Consensus 71 ~~~lVDlPGYGyAkv 85 (200)
T COG0218 71 ELRLVDLPGYGYAKV 85 (200)
T ss_pred cEEEEeCCCcccccC
Confidence 377899999998875
No 280
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=55.39 E-value=13 Score=32.82 Aligned_cols=28 Identities=14% Similarity=0.411 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCCCCChHHHHHHHHhhh
Q psy16156 232 FHVEMVDSGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 232 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl 259 (260)
..+..+++|||++.++|+...+.+..++
T Consensus 461 ~~~r~y~aGHMvp~d~P~~~~~~~~~~~ 488 (498)
T COG2939 461 TFLRIYEAGHMVPYDRPESSLEMVNLWI 488 (498)
T ss_pred eEEEEecCcceeecCChHHHHHHHHHHH
Confidence 4456678999999999999988877654
No 281
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=55.26 E-value=23 Score=28.49 Aligned_cols=36 Identities=17% Similarity=-0.001 Sum_probs=26.1
Q ss_pred HHHHHHHHHHcCCc----eEEEEEeChhHHHHHHHHHhCcc
Q psy16156 47 LLACHRVVNHFAWT----KFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 47 a~dl~~~~~~l~~~----~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
+..+..+.++ ++. .-.++|-|.|+.+|..||...+-
T Consensus 20 ~GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~~~ 59 (249)
T cd07220 20 VGVASCLLEH-APFLVANARKIYGASAGALTATALVTGVCL 59 (249)
T ss_pred HHHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCCCH
Confidence 4455555555 433 35689999999999999987653
No 282
>PLN02209 serine carboxypeptidase
Probab=53.96 E-value=16 Score=32.07 Aligned_cols=61 Identities=15% Similarity=0.230 Sum_probs=42.0
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhh--------------------hhCCCC-cEEEEEc-CCCCCCCCChHHHHHH
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCL--------------------YSRHPK-FHVEMVD-SGHDMELEEPEKLSGL 254 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~--------------------~~~~p~-~~~~~~~-~gH~~~~e~p~~~~~~ 254 (260)
.+++|+..|+.|.+++..-.+... +.++ +.. .+ .+++.+. +||+++ .+|++..+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi-~~L~w~~~~~~~~w~~~~q~aG~vk~y-~n~Ltfv~V~~AGHmVp-~qP~~al~m 427 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWI-KSLNYSIIDDWRPWMIKGQIAGYTRTY-SNKMTFATVKGGGHTAE-YLPEESSIM 427 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHH-HhcCCccCCCeeeeEECCEeeeEEEEe-CCceEEEEEcCCCCCcC-cCHHHHHHH
Confidence 479999999999877763222222 1111 001 23 7777776 699997 599999999
Q ss_pred HHhhhC
Q psy16156 255 ISDFLD 260 (260)
Q Consensus 255 i~~fl~ 260 (260)
+.+|++
T Consensus 428 ~~~fi~ 433 (437)
T PLN02209 428 FQRWIS 433 (437)
T ss_pred HHHHHc
Confidence 999974
No 283
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=53.50 E-value=17 Score=31.87 Aligned_cols=61 Identities=11% Similarity=0.211 Sum_probs=41.7
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhh---------------------hhCCCCcEEEEEc-CCCCCCCCChHHHHHH
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCL---------------------YSRHPKFHVEMVD-SGHDMELEEPEKLSGL 254 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~---------------------~~~~p~~~~~~~~-~gH~~~~e~p~~~~~~ 254 (260)
..++|+..|+.|.+++..-.+... +.++ ... .+.+++.+. +||+++ .+|++..+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi-~~L~w~~~~~~~~w~~~~~~~G~vk~y~-n~ltfv~V~~AGHmVp-~qP~~al~m 423 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWI-RSLNYSPIHNWRPWMINNQIAGYTRAYS-NKMTFATIKAGGHTAE-YRPNETFIM 423 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHH-HhCCCCCCCCcccccCCCEeeeEEEEeC-CceEEEEEcCCCCCCC-CCHHHHHHH
Confidence 479999999999877663222221 1111 111 136777776 699997 599999999
Q ss_pred HHhhhC
Q psy16156 255 ISDFLD 260 (260)
Q Consensus 255 i~~fl~ 260 (260)
+.+|++
T Consensus 424 ~~~Fi~ 429 (433)
T PLN03016 424 FQRWIS 429 (433)
T ss_pred HHHHHc
Confidence 999974
No 284
>KOG2214|consensus
Probab=53.37 E-value=11 Score=33.26 Aligned_cols=43 Identities=12% Similarity=0.118 Sum_probs=35.1
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHh
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl 90 (260)
...+..++++ ++-+=+|.|-|+||.||..++.+.-|.+++|.-
T Consensus 190 ~GVlrtL~e~-dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll~ 232 (543)
T KOG2214|consen 190 IGVLRTLLEQ-DLLPNIISGSSAGAIVASLVGVRSNEELKQLLT 232 (543)
T ss_pred HHHHHHHHHc-cccchhhcCCchhHHHHHHHhhcchHHHHHHhc
Confidence 4555566655 667779999999999999999999998888764
No 285
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=53.14 E-value=15 Score=30.64 Aligned_cols=22 Identities=27% Similarity=0.154 Sum_probs=19.0
Q ss_pred CCceEEEEEeChhHHHHHHHHH
Q psy16156 58 AWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 58 ~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
+.++..+.|||+|=+-|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4788899999999999887765
No 286
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=52.99 E-value=12 Score=31.75 Aligned_cols=19 Identities=21% Similarity=0.134 Sum_probs=16.8
Q ss_pred EEEEeChhHHHHHHHHHhC
Q psy16156 63 IWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 63 ~lvGhSmGG~ia~~~a~~~ 81 (260)
.+.|.|.||.||..+|..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 7899999999999998753
No 287
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=52.74 E-value=19 Score=29.85 Aligned_cols=52 Identities=17% Similarity=0.006 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCc---e-EEEEEeChhHHHHHHHHH
Q psy16156 16 PARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWT---K-FIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 16 ~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~---~-~~lvGhSmGG~ia~~~a~ 79 (260)
.+.++|+++| | |..-.+ ..+.-|.++.+.++.. . =.++|-|.||.||..++.
T Consensus 5 ~~~~riLsLd--G---------GGirG~-~~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 5 GRGIRILSID--G---------GGTRGV-VALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred CCCcEEEEEC--C---------ChHHHH-HHHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 3468888887 1 111111 1234445555555432 1 248899999999999986
No 288
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=52.51 E-value=18 Score=33.95 Aligned_cols=32 Identities=22% Similarity=0.124 Sum_probs=24.5
Q ss_pred HHHHHHHH---HcCCceEEEEEeChhHHHHHHHHH
Q psy16156 48 LACHRVVN---HFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 48 ~dl~~~~~---~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
.++...++ .+++.--+|+|.|+||.+|..+|.
T Consensus 51 ~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 51 GALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 34445554 446677799999999999999997
No 289
>PRK12467 peptide synthase; Provisional
Probab=52.36 E-value=35 Score=39.03 Aligned_cols=84 Identities=17% Similarity=0.052 Sum_probs=53.1
Q ss_pred hHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHc-CCceEEEEEeChhHHHHHHHHHh---Ccc
Q psy16156 8 FDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF-AWTKFIWLGHSLGGQLGTHYAAM---FPQ 83 (260)
Q Consensus 8 w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhSmGG~ia~~~a~~---~p~ 83 (260)
+..+...|..+..|+.+..++.-.-.. . ..++..++..-.+.+... ...++.+.|+|+||.+|..++.. ..+
T Consensus 3708 ~~~l~~~l~~~~~~~~l~~~~~~~d~~-~---~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~ 3783 (3956)
T PRK12467 3708 YEPLAVILEGDRHVLGLTCRHLLDDGW-Q---DTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGE 3783 (3956)
T ss_pred hHHHHHHhCCCCcEEEEeccccccccC-C---ccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCC
Confidence 445556676667888888776532222 1 123444444444444433 34579999999999999988764 566
Q ss_pred hhhhHHhhcccC
Q psy16156 84 LMDRLILLDAMN 95 (260)
Q Consensus 84 ~v~~lvlid~~~ 95 (260)
.+.-+.+++...
T Consensus 3784 ~~~~~~~~~~~~ 3795 (3956)
T PRK12467 3784 SEAFLGLFDNTL 3795 (3956)
T ss_pred ceeEEEEEeccc
Confidence 677676776544
No 290
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=52.02 E-value=48 Score=27.46 Aligned_cols=82 Identities=9% Similarity=-0.028 Sum_probs=54.7
Q ss_pred hhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeCh-----hHHHHHHHHHhCcchh
Q psy16156 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSL-----GGQLGTHYAAMFPQLM 85 (260)
Q Consensus 11 ~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSm-----GG~ia~~~a~~~p~~v 85 (260)
.+..|-....|+.-|.----.-. ..+ ..+++++|++-+.+++..+|.. .++++-.- =+.|++.-+...|..-
T Consensus 123 TV~alLp~~~vyitDW~dAr~Vp-~~~-G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~P 199 (415)
T COG4553 123 TVEALLPYHDVYITDWVDARMVP-LEA-GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVP 199 (415)
T ss_pred HHHHhccccceeEeeccccceee-ccc-CCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCC
Confidence 34444444566666654322211 122 3689999999999999999965 67666553 3566676677788888
Q ss_pred hhHHhhcccC
Q psy16156 86 DRLILLDAMN 95 (260)
Q Consensus 86 ~~lvlid~~~ 95 (260)
.++++++++.
T Consensus 200 ssMtlmGgPI 209 (415)
T COG4553 200 SSMTLMGGPI 209 (415)
T ss_pred ceeeeecCcc
Confidence 9999997553
No 291
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=51.67 E-value=8.8 Score=31.04 Aligned_cols=15 Identities=40% Similarity=0.565 Sum_probs=12.7
Q ss_pred CCceEEEEEeChhHH
Q psy16156 58 AWTKFIWLGHSLGGQ 72 (260)
Q Consensus 58 ~~~~~~lvGhSmGG~ 72 (260)
++..++++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 467899999999964
No 292
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=51.02 E-value=16 Score=33.15 Aligned_cols=46 Identities=20% Similarity=0.354 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCceEEEEEe------ChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 47 LLACHRVVNHFAWTKFIWLGH------SLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGh------SmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
...+.+++.. .++++++|| ++|+.||+..-+..-.+ .+-+++|+.-
T Consensus 327 s~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 327 STALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred HHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 3344445544 589999999 89999999765544444 5666677543
No 293
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=50.03 E-value=33 Score=28.33 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=25.6
Q ss_pred CeEEEEcCCCCCCCCCCCCC--Ccc--ch-hhHHHHHHHHHHHcCCc
Q psy16156 19 YYYVCIDLPGHGLSSHFPPG--MLL--DW-LNYLLACHRVVNHFAWT 60 (260)
Q Consensus 19 y~vi~~Dl~GhG~S~~~~~~--~~~--~~-~~~a~dl~~~~~~l~~~ 60 (260)
-++|++| ||||-.+.-..+ ..+ ++ .++|..|.+.++..|.+
T Consensus 56 ~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~~ 101 (287)
T PRK10319 56 KRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGID 101 (287)
T ss_pred CeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCCE
Confidence 4799999 899977642111 112 22 26677778888777643
No 294
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=49.91 E-value=39 Score=21.67 Aligned_cols=41 Identities=22% Similarity=0.165 Sum_probs=27.3
Q ss_pred cchhhHHHHHHHHHHH----cCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 41 LDWLNYLLACHRVVNH----FAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 41 ~~~~~~a~dl~~~~~~----l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
......+++..+.++. -|.+++.++|-|-|=.+|.++++.+
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3445445554555554 3457999999999999998888765
No 295
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=49.61 E-value=17 Score=39.39 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=24.6
Q ss_pred HHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 50 CHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 50 l~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
+..++..+|+++-.++|||+|=+.|+..|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 34567788999999999999999988776
No 296
>PF03283 PAE: Pectinacetylesterase
Probab=48.91 E-value=34 Score=29.29 Aligned_cols=38 Identities=21% Similarity=0.105 Sum_probs=27.3
Q ss_pred CceEEEEEeChhHHHHHHHH----HhCcchhhhHHhhcccCC
Q psy16156 59 WTKFIWLGHSLGGQLGTHYA----AMFPQLMDRLILLDAMNQ 96 (260)
Q Consensus 59 ~~~~~lvGhSmGG~ia~~~a----~~~p~~v~~lvlid~~~~ 96 (260)
.++++|-|.|-||.=++..+ .+.|..++-..+.|+..+
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 47899999999999888654 346765555666676543
No 297
>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.
Probab=47.18 E-value=35 Score=28.72 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=39.5
Q ss_pred EcCCCCCCCCCCC------------CCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhH
Q psy16156 24 IDLPGHGLSSHFP------------PGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRL 88 (260)
Q Consensus 24 ~Dl~GhG~S~~~~------------~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~l 88 (260)
+.+|||+-.+... ....|+..+|++-+..+++..++.+.. |-|=.|.=|..|....|.+++++
T Consensus 231 f~MPg~~m~dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W~i~~~~--gL~~eg~~Ard~l~~l~~r~~r~ 305 (330)
T PF03405_consen 231 FRMPGHLMPDGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRWKIESRT--GLSGEGEKARDYLCALPARLRRF 305 (330)
T ss_dssp ---TTTT---SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHTTGGG----S--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhcccCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCccc--CCChHHHHHHHHHHhhHHHHHHH
Confidence 6789987654211 012478888888777799999998776 88888888888888888887776
No 298
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.12 E-value=7.6 Score=28.86 Aligned_cols=34 Identities=6% Similarity=0.078 Sum_probs=28.4
Q ss_pred ceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcccC
Q psy16156 60 TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95 (260)
Q Consensus 60 ~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~~ 95 (260)
+.+.||.+|||=.||-+.....+ +++.+.|++.+
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 56789999999999999887766 88888888654
No 299
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=46.20 E-value=34 Score=25.15 Aligned_cols=31 Identities=10% Similarity=-0.067 Sum_probs=22.2
Q ss_pred HHHHHHHHHHcCC--ceEEEEEeChhHHHHHHHH
Q psy16156 47 LLACHRVVNHFAW--TKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 47 a~dl~~~~~~l~~--~~~~lvGhSmGG~ia~~~a 78 (260)
+.-+.++.+ .++ .--.+.|.|.|+.+|..++
T Consensus 14 ~gvl~~l~~-~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAE-RGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHH-hCCccCCCEEEEEcHHHHHHHHHh
Confidence 334444444 344 5568889999999999999
No 300
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=44.80 E-value=55 Score=28.04 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=50.0
Q ss_pred EcCCCCCCCCCCC------------CCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHH
Q psy16156 24 IDLPGHGLSSHFP------------PGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLI 89 (260)
Q Consensus 24 ~Dl~GhG~S~~~~------------~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 89 (260)
+.+|||+-.+... ....|+..+|++-|.-+++..++.+. -|-|==|.=|..|....|.++++|-
T Consensus 288 i~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W~v~~l--~gLs~eg~kArd~l~~l~~rirr~~ 363 (390)
T PLN00179 288 ITMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRWKVEEL--TGLSGEGRRAQDYVCGLPPRIRRLE 363 (390)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCcCcc--cCCCHHHHHHHHHHHHhHHHHHHHH
Confidence 6889998776211 11358888999888888888888865 5889889999999999999988875
No 301
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=44.32 E-value=28 Score=26.36 Aligned_cols=43 Identities=9% Similarity=0.006 Sum_probs=29.2
Q ss_pred HhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-CCCCC
Q psy16156 194 RNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-SGHDM 243 (260)
Q Consensus 194 ~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~gH~~ 243 (260)
.++.-|.+++.+++|++++. +.+....+.. +..++.+. +||..
T Consensus 114 ~~lpfps~vvaSrnDp~~~~----~~a~~~a~~w---gs~lv~~g~~GHiN 157 (181)
T COG3545 114 EPLPFPSVVVASRNDPYVSY----EHAEDLANAW---GSALVDVGEGGHIN 157 (181)
T ss_pred ccCCCceeEEEecCCCCCCH----HHHHHHHHhc---cHhheecccccccc
Confidence 56778999999999998765 3333333333 45677765 68874
No 302
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.14 E-value=20 Score=29.54 Aligned_cols=19 Identities=21% Similarity=0.375 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHhC
Q psy16156 63 IWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 63 ~lvGhSmGG~ia~~~a~~~ 81 (260)
.++|-|.||.+|..+|..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7899999999999998765
No 303
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=43.69 E-value=22 Score=26.77 Aligned_cols=61 Identities=11% Similarity=0.004 Sum_probs=37.4
Q ss_pred HhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcCCCCCC-CCChHHHHHHHHhh
Q psy16156 194 RNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGHDME-LEEPEKLSGLISDF 258 (260)
Q Consensus 194 ~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~gH~~~-~e~p~~~~~~i~~f 258 (260)
..+.+|+.++.|.+|..... ... .+..+.......+...++|+|+.+ .+++..+.+.|..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~---~~~-~~~W~~~~~~~~~~~~~~g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 150 GPVAAPTLLVRASEPLAEWP---DED-PDGWRAHWPLPHTVVDVPGDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCCEEEEeccCCCCCCC---CCC-cccccCCCCCCceeEEccCchHHHHHHhHHHHHHHHHhh
Confidence 35788999999998864211 001 112222221357778888899875 56677777766654
No 304
>PRK04940 hypothetical protein; Provisional
Probab=43.07 E-value=90 Score=23.78 Aligned_cols=50 Identities=12% Similarity=-0.065 Sum_probs=31.2
Q ss_pred EEEEEeCCCCcchhhcchhhHHHHhhhhCCCCc-EEEEEcCCCCCCCCChHHHHHHHHhhh
Q psy16156 200 TLCILSQDSFNRVWIVNENYIGTYCLYSRHPKF-HVEMVDSGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 200 ~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~gH~~~~e~p~~~~~~i~~fl 259 (260)
.+++..+.|.+.+. ++..+++. ++ +.+..+||+|-...- +.....|.+|+
T Consensus 127 ~~vllq~gDEvLDy-------r~a~~~y~--~~y~~~v~~GGdH~f~~f-e~~l~~I~~F~ 177 (180)
T PRK04940 127 CLVILSRNDEVLDS-------QRTAEELH--PYYEIVWDEEQTHKFKNI-SPHLQRIKAFK 177 (180)
T ss_pred EEEEEeCCCcccCH-------HHHHHHhc--cCceEEEECCCCCCCCCH-HHHHHHHHHHH
Confidence 48999999997664 22333332 45 666777876655444 33556677876
No 305
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=41.62 E-value=48 Score=29.69 Aligned_cols=38 Identities=8% Similarity=0.110 Sum_probs=28.2
Q ss_pred hhhHHHHHH-HHHHHcCCceEEEEEe-ChhHHHHHHHHHh
Q psy16156 43 WLNYLLACH-RVVNHFAWTKFIWLGH-SLGGQLGTHYAAM 80 (260)
Q Consensus 43 ~~~~a~dl~-~~~~~l~~~~~~lvGh-SmGG~ia~~~a~~ 80 (260)
++.+++|+. ++.+.++-.+-.|+|| |=||.+|..++.+
T Consensus 383 Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 383 LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 678999885 4556777777788887 8899999888765
No 306
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=41.49 E-value=60 Score=26.53 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=43.6
Q ss_pred hhhccCC--CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEE-eChhHHHHHHHHHhCcc-hh
Q psy16156 10 KLLPLLP--ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLG-HSLGGQLGTHYAAMFPQ-LM 85 (260)
Q Consensus 10 ~~~~~L~--~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvG-hSmGG~ia~~~a~~~p~-~v 85 (260)
..+..++ .+|.++.+|-+|....+. ...+.+.++++.......+||- -++++.-+...+..+.. .+
T Consensus 144 ~~l~~l~~~~~~D~ViIDt~Gr~~~~~----------~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~ 213 (270)
T PRK06731 144 RALTYFKEEARVDYILIDTAGKNYRAS----------ETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHI 213 (270)
T ss_pred HHHHHHHhcCCCCEEEEECCCCCcCCH----------HHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCC
Confidence 3344454 368999999998853321 2233444555555554556654 56888888888887543 45
Q ss_pred hhHHh
Q psy16156 86 DRLIL 90 (260)
Q Consensus 86 ~~lvl 90 (260)
.++|+
T Consensus 214 ~~~I~ 218 (270)
T PRK06731 214 DGIVF 218 (270)
T ss_pred CEEEE
Confidence 66665
No 307
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=41.44 E-value=65 Score=28.49 Aligned_cols=44 Identities=18% Similarity=0.113 Sum_probs=26.7
Q ss_pred eEEEEcCCCCCCCCCCCCC--Ccc--ch-hhHHHHHHHHHHHcCCceEEE
Q psy16156 20 YYVCIDLPGHGLSSHFPPG--MLL--DW-LNYLLACHRVVNHFAWTKFIW 64 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~~~~~--~~~--~~-~~~a~dl~~~~~~l~~~~~~l 64 (260)
-+|++| ||||-.+.-..+ ..+ ++ .++|..|.+.++..+.-++++
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~~g~~Vvl 240 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVL 240 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 489999 999987642211 112 22 267778888888764333443
No 308
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=41.37 E-value=36 Score=23.83 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~ 75 (260)
.....+.-.+..++.+.+.++|||=-|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3456677788999999999999988887665
No 309
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=41.30 E-value=96 Score=22.91 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=27.7
Q ss_pred hhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChh
Q psy16156 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLG 70 (260)
Q Consensus 11 ~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmG 70 (260)
+...+.+ -.||++|-+|- .++..++|+-+..+.+. |-+=+.+||-+.|
T Consensus 59 il~~~~~-~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G 106 (153)
T TIGR00246 59 ILAAIGK-AHVVTLDIPGK----------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEG 106 (153)
T ss_pred HHHhCCC-CeEEEEcCCCC----------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCc
Confidence 3444543 45788886542 34555677766666433 3245667777766
No 310
>PLN00021 chlorophyllase
Probab=41.01 E-value=58 Score=27.20 Aligned_cols=53 Identities=11% Similarity=-0.052 Sum_probs=30.1
Q ss_pred hccccEEEEEeCCCC-----cchhhcchhh-HHHHhhhhCCCCcEEEEEc-CCCCCCCCCh
Q psy16156 195 NIQCQTLCILSQDSF-----NRVWIVNENY-IGTYCLYSRHPKFHVEMVD-SGHDMELEEP 248 (260)
Q Consensus 195 ~i~~P~l~i~G~~d~-----~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~-~gH~~~~e~p 248 (260)
++.+|+|+|.+..|. ..+...+... ..+.++... ++..+..++ +||+-++|+.
T Consensus 187 ~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 187 NLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred cCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCC
Confidence 478999999988653 1110011111 134555544 355666665 6999876665
No 311
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=38.98 E-value=26 Score=26.00 Aligned_cols=25 Identities=16% Similarity=-0.068 Sum_probs=19.3
Q ss_pred HcCCceEEEEEeChhHHHHHHHHHh
Q psy16156 56 HFAWTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 56 ~l~~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
..+..--.+.|-|.||.+|..++..
T Consensus 23 ~~~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 23 GLGERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp TGCCT-SEEEEECCHHHHHHHHHTC
T ss_pred hhCCCccEEEEcChhhhhHHHHHhC
Confidence 3344556899999999999888876
No 312
>PRK15219 carbonic anhydrase; Provisional
Probab=37.55 E-value=64 Score=25.96 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
+...-|+-.+..|+.+.++++|||-=|.|...+.
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 3455677888899999999999999888776554
No 313
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.61 E-value=52 Score=23.83 Aligned_cols=31 Identities=16% Similarity=0.077 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGT 75 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~ 75 (260)
+....+.-.+..++.+.++++||+-=|++..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 4556777888899999999999987666554
No 314
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=35.54 E-value=43 Score=25.65 Aligned_cols=27 Identities=11% Similarity=0.012 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHHcCCceEEEEEeCh
Q psy16156 43 WLNYLLACHRVVNHFAWTKFIWLGHSL 69 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~~~~~lvGhSm 69 (260)
+..++.-+..++++.++..-.|+|||-
T Consensus 132 ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 345567778888888887779999974
No 315
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=35.48 E-value=78 Score=25.45 Aligned_cols=17 Identities=29% Similarity=0.239 Sum_probs=13.9
Q ss_pred CCCeEEEEcCCCCCCCC
Q psy16156 17 ARYYYVCIDLPGHGLSS 33 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~ 33 (260)
+++++..+|.||+|.+.
T Consensus 77 ~g~~i~vIDTPGl~~~~ 93 (249)
T cd01853 77 DGFKLNIIDTPGLLESV 93 (249)
T ss_pred CCeEEEEEECCCcCcch
Confidence 35678899999999774
No 316
>PRK14974 cell division protein FtsY; Provisional
Probab=34.15 E-value=75 Score=26.93 Aligned_cols=64 Identities=23% Similarity=0.260 Sum_probs=42.0
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc--hhhhHHh
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ--LMDRLIL 90 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~--~v~~lvl 90 (260)
.+|.+|.+|-+|...++. .+.+.+..+.+..+....+||.-++-|.=+..-|..+.+ .+.++|+
T Consensus 221 ~~~DvVLIDTaGr~~~~~----------~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 221 RGIDVVLIDTAGRMHTDA----------NLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred CCCCEEEEECCCccCCcH----------HHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 468899999887764321 233555566666667778888888877766766655432 4555555
No 317
>KOG2382|consensus
Probab=33.76 E-value=3.4 Score=34.27 Aligned_cols=65 Identities=14% Similarity=0.033 Sum_probs=41.0
Q ss_pred CCCCeEEEEcCCCCCCCC-CCCCCCccchhhHHHHHHHHHHHc---CCceEEEEEeChhHHHHHHHHHhCcchhhhH
Q psy16156 16 PARYYYVCIDLPGHGLSS-HFPPGMLLDWLNYLLACHRVVNHF---AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRL 88 (260)
Q Consensus 16 ~~~y~vi~~Dl~GhG~S~-~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~l 88 (260)
...+++..+|+.|||-+. .. ...++.. .-+ +++.+ ++.+. .+|+|+|-...+.-+.++++.+.+.
T Consensus 117 ~~~~~~~~~~l~GHsmGG~~~--~m~~t~~--~p~---~~~rliv~D~sP~-~~~~~~~e~~e~i~~m~~~d~~~~~ 185 (315)
T KOG2382|consen 117 GGSTRLDPVVLLGHSMGGVKV--AMAETLK--KPD---LIERLIVEDISPG-GVGRSYGEYRELIKAMIQLDLSIGV 185 (315)
T ss_pred ccccccCCceecccCcchHHH--HHHHHHh--cCc---ccceeEEEecCCc-cCCcccchHHHHHHHHHhccccccc
Confidence 334689999999999887 21 0001110 011 11222 22333 8999999999999999998887555
No 318
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=33.25 E-value=39 Score=17.12 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=10.0
Q ss_pred hhHHHHH------HHHHhCcchh
Q psy16156 69 LGGQLGT------HYAAMFPQLM 85 (260)
Q Consensus 69 mGG~ia~------~~a~~~p~~v 85 (260)
.||.++. -+|..+||++
T Consensus 7 l~~~va~~L~vYL~~ALlrPErF 29 (29)
T PRK14759 7 LAGAVSLGLLIYLTYALLRPERF 29 (29)
T ss_pred HHHHHHHHHHHHHHHHHhCcccC
Confidence 4555554 4566788763
No 319
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=33.16 E-value=11 Score=34.04 Aligned_cols=78 Identities=15% Similarity=0.122 Sum_probs=53.1
Q ss_pred hccCCCCCeEEEEcCCCCCCCCCC------CCCCccchhhHHHHHHHHHHHcCC---ceEEEEEeChhHHHHHHHHHhCc
Q psy16156 12 LPLLPARYYYVCIDLPGHGLSSHF------PPGMLLDWLNYLLACHRVVNHFAW---TKFIWLGHSLGGQLGTHYAAMFP 82 (260)
Q Consensus 12 ~~~L~~~y~vi~~Dl~GhG~S~~~------~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhSmGG~ia~~~a~~~p 82 (260)
...|.++...+...+||=|+=... .....-.+++++...+.++++ |+ ++.-+-|-|-||.+.-....++|
T Consensus 444 ~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrP 522 (648)
T COG1505 444 KLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRP 522 (648)
T ss_pred HHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccCh
Confidence 344566777778899998876530 111112244555544444444 55 57889999999999988888999
Q ss_pred chhhhHHh
Q psy16156 83 QLMDRLIL 90 (260)
Q Consensus 83 ~~v~~lvl 90 (260)
|.+.++|+
T Consensus 523 elfgA~v~ 530 (648)
T COG1505 523 ELFGAAVC 530 (648)
T ss_pred hhhCceee
Confidence 99888875
No 320
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=32.88 E-value=1.4e+02 Score=22.47 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=27.2
Q ss_pred cchhhHHHHHHHHHHHcCCceEEEEEeC-hhHHHHHHHHHh
Q psy16156 41 LDWLNYLLACHRVVNHFAWTKFIWLGHS-LGGQLGTHYAAM 80 (260)
Q Consensus 41 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS-mGG~ia~~~a~~ 80 (260)
|+.+.+++-|.++++..+ -..+|+|+| .|+.++-++|.+
T Consensus 74 ~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~ 113 (181)
T cd01985 74 YDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAAL 113 (181)
T ss_pred CChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHH
Confidence 556677888888888776 456666664 566777777765
No 321
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.68 E-value=79 Score=24.04 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
...-++-.+..|+.+.++++|||==|+|...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 345667778899999999999999888777553
No 322
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=32.44 E-value=47 Score=25.59 Aligned_cols=64 Identities=22% Similarity=0.190 Sum_probs=41.6
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc--hhhhHHh
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ--LMDRLIL 90 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~--~v~~lvl 90 (260)
++|.+|.+|=+|....+ ....+.+.++++......++||=-+..+.-.+..+..+-+ .+.++|+
T Consensus 82 ~~~D~vlIDT~Gr~~~d----------~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIl 147 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSPRD----------EELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLIL 147 (196)
T ss_dssp TTSSEEEEEE-SSSSTH----------HHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEE
T ss_pred cCCCEEEEecCCcchhh----------HHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEE
Confidence 46899999988766221 2445667777777776677777777766766665555433 3566665
No 323
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.43 E-value=78 Score=24.30 Aligned_cols=33 Identities=18% Similarity=0.117 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
....|+-.+..|+.+.++++|||-=|.|...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 445677778999999999999998888776554
No 324
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=32.32 E-value=1.1e+02 Score=25.00 Aligned_cols=55 Identities=9% Similarity=0.004 Sum_probs=37.5
Q ss_pred HHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-C-CCCCCCCChHHHHHHHHh
Q psy16156 191 SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-S-GHDMELEEPEKLSGLISD 257 (260)
Q Consensus 191 ~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~-gH~~~~e~p~~~~~~i~~ 257 (260)
.....+.+|++++.|++-.. . ..+... |+++.+.++ + |..----.|+...+.|++
T Consensus 141 ~~Ag~~gVPV~lvsGD~~~~----------~-ea~~~~-P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~ 197 (263)
T cd08770 141 YTAAYLGVPVVFVSGDAGLC----------A-EAKELN-PNIVTVPVKEGFGGATISIHPGLACKEIRK 197 (263)
T ss_pred HHHhhcCCCEEEEecCHHHH----------H-HHHHhC-CCceEEEeeeeeccccccCCHHHHHHHHHH
Confidence 44578999999999986541 1 223223 788888886 5 655555678877777754
No 325
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.07 E-value=31 Score=28.66 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=15.2
Q ss_pred EEEEeChhHHHHHHHHH
Q psy16156 63 IWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 63 ~lvGhSmGG~ia~~~a~ 79 (260)
.++|-|.||.||..++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 78899999999998874
No 326
>PF06073 DUF934: Bacterial protein of unknown function (DUF934); InterPro: IPR008318 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=31.96 E-value=1.8e+02 Score=20.21 Aligned_cols=29 Identities=21% Similarity=0.218 Sum_probs=23.2
Q ss_pred CcccccchHhhhccCCCCCeEEEEcCCCCC
Q psy16156 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHG 30 (260)
Q Consensus 1 ~~~~~~~w~~~~~~L~~~y~vi~~Dl~GhG 30 (260)
|-.+......+.+.|. +..+|+++.|.+.
T Consensus 3 ~l~~d~~~~~l~~~L~-~l~lI~i~FP~F~ 31 (110)
T PF06073_consen 3 WLAPDDDPEELADDLD-RLPLIAIDFPKFT 31 (110)
T ss_pred ecCCCCCHHHHHhhcc-CCCEEEEECCCcC
Confidence 4556677788888886 5799999999886
No 327
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=31.86 E-value=30 Score=25.48 Aligned_cols=20 Identities=30% Similarity=0.777 Sum_probs=17.1
Q ss_pred eChhHHHHHHHHHhCcchhh
Q psy16156 67 HSLGGQLGTHYAAMFPQLMD 86 (260)
Q Consensus 67 hSmGG~ia~~~a~~~p~~v~ 86 (260)
.+||+.||..+..++|+..+
T Consensus 29 g~mG~GIA~~~k~~~P~~~~ 48 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQILE 48 (154)
T ss_pred CcCChHHHHHHHHHcChHHH
Confidence 37999999999999997543
No 328
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=31.60 E-value=2e+02 Score=20.80 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
.....+.-.+..++.+.++++|||==|++...+.
T Consensus 40 ~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 40 SALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred chhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 4456677788899999999999999888885444
No 329
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=31.59 E-value=1.6e+02 Score=23.58 Aligned_cols=61 Identities=16% Similarity=0.263 Sum_probs=42.5
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCccc-hhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhC
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLLD-WLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~~-~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~ 81 (260)
..|.-|.+.+-|-..+....-+.+.+ +..+|.++.++.+. +.+=.++|| ||.++-.|....
T Consensus 3 ~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~-g~eV~iVvG---GGni~Rg~~~~~ 64 (238)
T COG0528 3 PKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDL-GVEVAVVVG---GGNIARGYIGAA 64 (238)
T ss_pred cceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhc-CcEEEEEEC---CCHHHHhHHHHH
Confidence 35888899999988887422222222 56888888888876 666568887 888887776554
No 330
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=31.51 E-value=1.4e+02 Score=24.65 Aligned_cols=45 Identities=16% Similarity=-0.023 Sum_probs=28.5
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCCC
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDMEL 245 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~~ 245 (260)
-.|++++.|+.|...+.. ..+ .+.++... -.+++..+++ .|....
T Consensus 245 lPP~~i~~a~~D~l~~~~--~~~-a~~L~~ag-v~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 245 LPPTLIQTAEFDPLRDEG--EAY-AERLRAAG-VPVELRVYPGMIHGFDL 290 (312)
T ss_pred CCCEEEEecCCCcchhHH--HHH-HHHHHHcC-CeEEEEEeCCcceeccc
Confidence 468999999999976631 222 34444433 2467778886 686543
No 331
>KOG2112|consensus
Probab=31.00 E-value=63 Score=25.16 Aligned_cols=47 Identities=9% Similarity=-0.045 Sum_probs=28.6
Q ss_pred cccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCCC
Q psy16156 197 QCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDMEL 245 (260)
Q Consensus 197 ~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~~ 245 (260)
..|.+..+|+.|.+++..-.+ ...+.++.... .++++.+++ +|..--
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~-~s~~~l~~~~~-~~~f~~y~g~~h~~~~ 191 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGE-KSAQFLKSLGV-RVTFKPYPGLGHSTSP 191 (206)
T ss_pred cchhheecccCCceeehHHHH-HHHHHHHHcCC-ceeeeecCCccccccH
Confidence 679999999999987752111 11233344332 356677776 776543
No 332
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=30.40 E-value=1.5e+02 Score=23.54 Aligned_cols=38 Identities=26% Similarity=0.243 Sum_probs=25.5
Q ss_pred eEEEEcCCCCCCCCCCCCC-Cc-c--c-hhhHHHHHHHHHHHcC
Q psy16156 20 YYVCIDLPGHGLSSHFPPG-ML-L--D-WLNYLLACHRVVNHFA 58 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~~~~~-~~-~--~-~~~~a~dl~~~~~~l~ 58 (260)
.+|++| ||||-.+.-.-+ .. . + ..+.+.-+...++..+
T Consensus 43 ~~I~ID-pGHGG~D~GAig~~g~~EKdvtL~ia~~l~~~L~~~g 85 (231)
T COG0860 43 KTIVID-PGHGGKDPGAIGPNGTLEKDVTLDIAKRLRDLLRAEG 85 (231)
T ss_pred eEEEEc-CCCCCCCCCccCCCCCccceeHHHHHHHHHHHHHhCC
Confidence 688999 999987642211 11 1 1 3367788888888888
No 333
>PRK10437 carbonic anhydrase; Provisional
Probab=30.30 E-value=76 Score=25.06 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
...-+.-.+..|+.+.++++|||==|+|...+.
T Consensus 77 ~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 77 CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred hHHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 345566677889999999999998888776553
No 334
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=29.71 E-value=1.4e+02 Score=24.17 Aligned_cols=57 Identities=21% Similarity=0.185 Sum_probs=32.6
Q ss_pred cccEEEEEeC------CCCcchhhcchhhHHHHhhhhCCC---CcEEEEEcC---CCCCCCCChHHHHHHHHhhh
Q psy16156 197 QCQTLCILSQ------DSFNRVWIVNENYIGTYCLYSRHP---KFHVEMVDS---GHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 197 ~~P~l~i~G~------~d~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~---gH~~~~e~p~~~~~~i~~fl 259 (260)
++.+|-|.|+ .|..++.. ....++....+ ..+-+.+.| .|.-..|+|+ +.+.|.+||
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~-----Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNA-----SSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-VDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHH-----HHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-HHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHH-----HHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH-HHHHHHHHh
Confidence 3678999998 45555541 12233332221 344455643 5887678875 557788887
No 335
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=29.49 E-value=87 Score=27.03 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCc----eEEEEEeChhHHHHHHHHHhC-cchhhhHH
Q psy16156 47 LLACHRVVNHFAWT----KFIWLGHSLGGQLGTHYAAMF-PQLMDRLI 89 (260)
Q Consensus 47 a~dl~~~~~~l~~~----~~~lvGhSmGG~ia~~~a~~~-p~~v~~lv 89 (260)
+.-+..+.+ .++. --.++|-|.|+.+|..|+... ++.+..++
T Consensus 28 vGVl~aL~E-~gp~ll~~~d~IaGtSAGALvAAl~asG~s~de~~r~~ 74 (382)
T cd07219 28 AGVVDALRD-LAPRMLETAHRVAGTSAGSVIAALVVCGISMDEYLRVL 74 (382)
T ss_pred HHHHHHHHh-cCCcccccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHH
Confidence 445555555 3422 246999999999999998863 33444443
No 336
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=29.46 E-value=56 Score=20.62 Aligned_cols=31 Identities=23% Similarity=0.520 Sum_probs=19.2
Q ss_pred eEEEEEeChhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 61 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
++.+|| ||.+++.+|....+.=..++++...
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEecc
Confidence 456777 5667777766554444566777643
No 337
>PF12083 DUF3560: Domain of unknown function (DUF3560); InterPro: IPR021944 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.
Probab=29.26 E-value=45 Score=23.74 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=15.8
Q ss_pred HHHHHHHHHHcCCceEEEEEeC
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHS 68 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhS 68 (260)
......+.+.+-..+++||||.
T Consensus 29 ~~~a~~~~~~ip~GQPIlVGHH 50 (126)
T PF12083_consen 29 YEAANRMAEAIPFGQPILVGHH 50 (126)
T ss_pred HHHHHHHHhccCCCCCeecccc
Confidence 3445566667777889999985
No 338
>PF01520 Amidase_3: N-acetylmuramoyl-L-alanine amidase; InterPro: IPR002508 The cell wall envelope of Gram-positive bacteria is a macromolecular, exoskeletal organelle that is assembled and turned over at designated sites. The cell wall also functions as a surface organelle that allows Gram-positive pathogens to interact with their environment, in particular the tissues of the infected host. All of these functions require that surface proteins and enzymes be properly targeted to the cell wall envelope. Two basic mechanisms, cell wall sorting and targeting, have been identified. Cell well sorting is the covalent attachment of surface proteins to the peptidoglycan via a C-terminal sorting signal that contains a consensus LPXTG sequence. More than 100 proteins that possess cell wall-sorting signals, including the M proteins of Streptococcus pyogenes, protein A of Staphylococcus aureus, and several internalins of Listeria monocytogenes, have been identified. Cell wall targeting involves the noncovalent attachment of proteins to the cell surface via specialised binding domains. Several of these wall-binding domains appear to interact with secondary wall polymers that are associated with the peptidoglycan, for example teichoic acids and polysaccharides. Proteins that are targeted to the cell surface include muralytic enzymes such as autolysins, lysostaphin, and phage lytic enzymes. Other examples for targeted proteins are the surface S-layer proteins of bacilli and clostridia, as well as virulence factors required for the pathogenesis of L. monocytogenes (internalin B) and Streptococcus pneumoniae (PspA) infections []. Autolysin 3.5.1.28 from EC hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell wall glycopeptides.; GO: 0008745 N-acetylmuramoyl-L-alanine amidase activity, 0009253 peptidoglycan catabolic process; PDB: 3QAY_A 3CZX_A 1JWQ_A 1XOV_A 3NE8_A.
Probab=29.07 E-value=53 Score=24.39 Aligned_cols=45 Identities=24% Similarity=0.286 Sum_probs=25.1
Q ss_pred EEEcCCCCCCCCCCCCC-Cc---cc-hhhHHHHHHHHHHHcCCceEEEEEeC
Q psy16156 22 VCIDLPGHGLSSHFPPG-ML---LD-WLNYLLACHRVVNHFAWTKFIWLGHS 68 (260)
Q Consensus 22 i~~Dl~GhG~S~~~~~~-~~---~~-~~~~a~dl~~~~~~l~~~~~~lvGhS 68 (260)
|++| ||||..++-..+ .. ++ ..+++.-|.+.++..| -++.+.--+
T Consensus 1 I~id-pGHgg~d~Ga~~~~g~~E~~~~l~ia~~l~~~L~~~g-~~V~~tr~~ 50 (175)
T PF01520_consen 1 IVID-PGHGGNDPGAVGPNGIREKDINLDIALRLKKELEKHG-IKVYLTRDN 50 (175)
T ss_dssp EEEE-EEEBTTBTSSBCTTSCBHHHHHHHHHHHHHHHHHHTT-EEEEESSSS
T ss_pred CEEE-CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhcCC-cEEEEeCCC
Confidence 3455 899877542111 11 12 2256777788888887 445555443
No 339
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.92 E-value=88 Score=25.12 Aligned_cols=18 Identities=28% Similarity=0.309 Sum_probs=16.6
Q ss_pred EEEEeChhHHHHHHHHHh
Q psy16156 63 IWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 63 ~lvGhSmGG~ia~~~a~~ 80 (260)
.++|-|.||.||..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999987
No 340
>KOG2486|consensus
Probab=28.24 E-value=1.3e+02 Score=24.92 Aligned_cols=15 Identities=33% Similarity=0.569 Sum_probs=11.8
Q ss_pred eEEEEcCCCCCCCCC
Q psy16156 20 YYVCIDLPGHGLSSH 34 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~ 34 (260)
+.+.+|+||+|...-
T Consensus 184 ~~~~vDlPG~~~a~y 198 (320)
T KOG2486|consen 184 SWYEVDLPGYGRAGY 198 (320)
T ss_pred eEEEEecCCcccccC
Confidence 456899999997753
No 341
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=28.06 E-value=34 Score=29.13 Aligned_cols=58 Identities=12% Similarity=-0.170 Sum_probs=36.4
Q ss_pred HHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-CCCCCCCCChHHH
Q psy16156 191 SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-SGHDMELEEPEKL 251 (260)
Q Consensus 191 ~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~gH~~~~e~p~~~ 251 (260)
.-+.+++.|++++.|..|...+. .. .+..-+..+.++...+..++ +.|.-..|-..++
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~-~~--~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPP-VT--EQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCc-cc--ccccccccCCcchhheeecCCCccccccccCccc
Confidence 34789999999999999985333 11 11222333422222566677 4799888777664
No 342
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=28.05 E-value=41 Score=28.63 Aligned_cols=19 Identities=26% Similarity=0.307 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHHhC
Q psy16156 63 IWLGHSLGGQLGTHYAAMF 81 (260)
Q Consensus 63 ~lvGhSmGG~ia~~~a~~~ 81 (260)
.++|-|.||.||..++...
T Consensus 46 liaGTStGgiiA~~la~~~ 64 (349)
T cd07214 46 VIAGTSTGGLITAMLTAPN 64 (349)
T ss_pred EEeeCCHHHHHHHHHhcCC
Confidence 6789999999999999853
No 343
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.04 E-value=43 Score=28.13 Aligned_cols=17 Identities=35% Similarity=0.493 Sum_probs=15.1
Q ss_pred EEEEeChhHHHHHHHHH
Q psy16156 63 IWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 63 ~lvGhSmGG~ia~~~a~ 79 (260)
.++|-|.||.||+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 78999999999998764
No 344
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.79 E-value=1.5e+02 Score=24.30 Aligned_cols=55 Identities=5% Similarity=-0.031 Sum_probs=36.3
Q ss_pred HHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-C-CCC-CCCCChHHHHHHHHh
Q psy16156 191 SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-S-GHD-MELEEPEKLSGLISD 257 (260)
Q Consensus 191 ~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~-gH~-~~~e~p~~~~~~i~~ 257 (260)
.......+|+.++.|++-. .. ..+... |+++.+.++ + |++ ----.|+...+.|++
T Consensus 141 ~~Ag~~gVPV~lVsGDd~~----------~~-ea~~~~-P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 141 AYAGEFGVPVVLVAGDSEL----------EK-EVKEET-PWAVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred HHHhhcCCCEEEEecCHHH----------HH-HHHHhC-CCceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 4457899999999998742 12 223222 789988887 6 744 455667776666653
No 345
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=27.44 E-value=57 Score=24.71 Aligned_cols=13 Identities=31% Similarity=0.603 Sum_probs=10.4
Q ss_pred ceEEEEEeChhHH
Q psy16156 60 TKFIWLGHSLGGQ 72 (260)
Q Consensus 60 ~~~~lvGhSmGG~ 72 (260)
...+|||||+--=
T Consensus 101 ~~tILVGHsL~nD 113 (174)
T cd06143 101 LGCIFVGHGLAKD 113 (174)
T ss_pred CCCEEEeccchhH
Confidence 4579999999863
No 346
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=26.68 E-value=1.4e+02 Score=24.33 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=37.1
Q ss_pred HHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-C-C-CCCCCCChHHHHHHHHh
Q psy16156 191 SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-S-G-HDMELEEPEKLSGLISD 257 (260)
Q Consensus 191 ~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~-g-H~~~~e~p~~~~~~i~~ 257 (260)
.......+|+.++.|++-.. . ..+... |+++.+.++ + | +.----.|++..+.|++
T Consensus 141 ~~Ag~~gVPV~lVsGDd~~~----------~-ea~~~~-p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~ 198 (266)
T cd08663 141 AVAGEYGVPVVLVTGDDAAC----------A-EARELG-PGVETVAVKEAIGRFAARCLPPAEARALIRE 198 (266)
T ss_pred HHHhhcCCCEEEEecCHHHH----------H-HHHhhC-CCcEEEEEecccCCCccccCCHHHHHHHHHH
Confidence 34578999999999976531 1 222223 789988887 5 7 44556677777777654
No 347
>KOG1578|consensus
Probab=26.53 E-value=44 Score=27.13 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=25.7
Q ss_pred HHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 48 LACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 48 ~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
.-|+-.+..|+.+++.++|||.=|.|+..+.
T Consensus 142 AalE~aV~~lkvenIiv~ghs~cgGik~~m~ 172 (276)
T KOG1578|consen 142 AALEYAVTTLKVENIIVIGHSLCGGIKGLMS 172 (276)
T ss_pred chHHHHHHHhccceEEEeccccCCchhhccc
Confidence 5567888999999999999999888776543
No 348
>PLN03019 carbonic anhydrase
Probab=26.45 E-value=1e+02 Score=26.01 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
....|+-.+.+|+.+.++++|||-=|.|...+.
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 346677788999999999999998777766543
No 349
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.28 E-value=1.3e+02 Score=25.07 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCC----ceEEEEEeC--hhHHHHHHHHHh
Q psy16156 47 LLACHRVVNHFAW----TKFIWLGHS--LGGQLGTHYAAM 80 (260)
Q Consensus 47 a~dl~~~~~~l~~----~~~~lvGhS--mGG~ia~~~a~~ 80 (260)
+.-+.+++++.++ +++.+||.| ||--+|..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5667889998875 589999997 999999988765
No 350
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=26.25 E-value=1.3e+02 Score=25.17 Aligned_cols=76 Identities=20% Similarity=0.136 Sum_probs=43.8
Q ss_pred hHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHH---cCCceEEEEEeChhHHHHHHHHHhCcc-
Q psy16156 8 FDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH---FAWTKFIWLGHSLGGQLGTHYAAMFPQ- 83 (260)
Q Consensus 8 w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~---l~~~~~~lvGhSmGG~ia~~~a~~~p~- 83 (260)
++.+...+.++|.++.+|-+|....+. --+.+ ...+..+++. ......+||-.+.-|.-++.-|..+-+
T Consensus 186 ~~~l~~~~~~~~D~ViIDTaGr~~~~~------~l~~e-L~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~ 258 (318)
T PRK10416 186 FDAIQAAKARGIDVLIIDTAGRLHNKT------NLMEE-LKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEA 258 (318)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcCCH------HHHHH-HHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhh
Confidence 444545566789999999999875432 11222 2233333332 123457888888888877766655422
Q ss_pred -hhhhHHh
Q psy16156 84 -LMDRLIL 90 (260)
Q Consensus 84 -~v~~lvl 90 (260)
.+.++|+
T Consensus 259 ~~~~giIl 266 (318)
T PRK10416 259 VGLTGIIL 266 (318)
T ss_pred CCCCEEEE
Confidence 2444544
No 351
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=26.06 E-value=1.6e+02 Score=25.66 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=16.0
Q ss_pred CCeEEEEcCCCCCCCCC
Q psy16156 18 RYYYVCIDLPGHGLSSH 34 (260)
Q Consensus 18 ~y~vi~~Dl~GhG~S~~ 34 (260)
.|.||.+|.|.|++|.+
T Consensus 290 ~fDlIilDPPsF~r~k~ 306 (393)
T COG1092 290 KFDLIILDPPSFARSKK 306 (393)
T ss_pred cccEEEECCcccccCcc
Confidence 79999999999999986
No 352
>PRK03031 rnpA ribonuclease P; Reviewed
Probab=26.05 E-value=1.8e+02 Score=20.35 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=28.9
Q ss_pred hHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCce
Q psy16156 8 FDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTK 61 (260)
Q Consensus 8 w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~ 61 (260)
++...+.|..+|.+|.+=-+|- ...++.++.+++..+++..++-+
T Consensus 75 ~R~~~~~l~~g~diVvi~r~~~---------~~~~~~~l~~~l~~ll~k~~~~~ 119 (122)
T PRK03031 75 LRQLLPRIAPGWDLVIIVKPTA---------AECNYEQFLQELEQLLIQAEIIH 119 (122)
T ss_pred HHHhhhccCCCceEEEEECCCc---------ccCCHHHHHHHHHHHHHHccCcc
Confidence 4445566666677776633321 13456688899999999887543
No 353
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=26.05 E-value=95 Score=17.96 Aligned_cols=27 Identities=11% Similarity=0.148 Sum_probs=22.5
Q ss_pred cchhhHHHHHHHHHHHcCCceEEEEEe
Q psy16156 41 LDWLNYLLACHRVVNHFAWTKFIWLGH 67 (260)
Q Consensus 41 ~~~~~~a~dl~~~~~~l~~~~~~lvGh 67 (260)
++.+.+-.|+...+..+.|..+.++|-
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipGs 32 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPGS 32 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEeccc
Confidence 455677799999999999999999883
No 354
>PF13289 SIR2_2: SIR2-like domain
Probab=25.70 E-value=1.5e+02 Score=20.88 Aligned_cols=15 Identities=13% Similarity=0.370 Sum_probs=11.3
Q ss_pred HcCCceEEEEEeChh
Q psy16156 56 HFAWTKFIWLGHSLG 70 (260)
Q Consensus 56 ~l~~~~~~lvGhSmG 70 (260)
.+.-..+.++|.|++
T Consensus 83 ~l~~~~~lfiGys~~ 97 (143)
T PF13289_consen 83 LLRSKTLLFIGYSFN 97 (143)
T ss_pred HHcCCCEEEEEECCC
Confidence 344568999999976
No 355
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=25.35 E-value=1.7e+02 Score=23.82 Aligned_cols=55 Identities=7% Similarity=0.051 Sum_probs=36.5
Q ss_pred HHHHhccccEEEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEc-C-CCC-CCCCChHHHHHHHHh
Q psy16156 191 SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVD-S-GHD-MELEEPEKLSGLISD 257 (260)
Q Consensus 191 ~~~~~i~~P~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~-gH~-~~~e~p~~~~~~i~~ 257 (260)
.....+.+|+.++.|++-.. . ..+... |+++.+.++ + |++ ----.|+...+.|++
T Consensus 140 ~~Ag~~gVPV~lvsGDd~~~----------~-ea~~~~-P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~ 197 (265)
T cd00281 140 LTAGYYGVPVVMVAGDAEVC----------K-EAKAYD-AQVETVVTKKGMGRFSVKAPSPQKVLRAIRE 197 (265)
T ss_pred HHHhhcCCCEEEEecCHHHH----------H-HHHHhC-CCceEEEEeeeeCCCccccCCHHHHHHHHHH
Confidence 44578999999999986541 1 222222 789988887 6 754 455677777666653
No 356
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=25.30 E-value=1.1e+02 Score=26.95 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=42.6
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc--hhhhHHh
Q psy16156 17 ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ--LMDRLIL 90 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~--~v~~lvl 90 (260)
.+|.+|.+|-+|.-..+ ..+.+.+..+.+..+...++||--++-|.-+...|..+-+ .+.++|+
T Consensus 181 ~~~DvViIDTaGr~~~d----------~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 181 ENFDIIIVDTSGRHKQE----------DSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCCEEEEECCCCCcch----------HHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 36999999999853221 1233445566666666788999888888777777766543 3566666
No 357
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=25.28 E-value=1.3e+02 Score=20.76 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=32.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCc-eEEEEEeChhH
Q psy16156 20 YYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWT-KFIWLGHSLGG 71 (260)
Q Consensus 20 ~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhSmGG 71 (260)
..|.+.+-|.+.... + ..-.+..+++-+..++++.++. .-.|+||....
T Consensus 68 ~sigIe~~g~~~~~~-~--~~~q~~~~~~L~~~l~~~~~i~~~~~i~~H~~~~ 117 (126)
T cd06583 68 YSIGIELIGNFDGGP-P--TAAQLEALAELLAYLVKRYGIPPDYRIVGHRDVS 117 (126)
T ss_pred ceEEEEEEeCCCCCC-C--CHHHHHHHHHHHHHHHHhCCCCCCCEEEecccCC
Confidence 446666666654422 1 1123557778888899999987 78999998753
No 358
>PLN03006 carbonate dehydratase
Probab=24.68 E-value=94 Score=25.84 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~ 77 (260)
...-|+-.+.+|+.+.++++|||-=|+|...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 34567788899999999999999988777433
No 359
>PLN00416 carbonate dehydratase
Probab=24.41 E-value=1.2e+02 Score=24.64 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
...-|+-.+..|+.+.++++|||-=|+|...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 345677788899999999999998888766554
No 360
>PRK07281 methionine aminopeptidase; Reviewed
Probab=24.28 E-value=73 Score=26.25 Aligned_cols=26 Identities=15% Similarity=0.206 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHcCCceE-EEEEeChh
Q psy16156 45 NYLLACHRVVNHFAWTKF-IWLGHSLG 70 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~-~lvGhSmG 70 (260)
++.+.+.++++..|...+ +.+||++|
T Consensus 176 di~~a~~~~~~~~G~~~~~~~~GHGIG 202 (286)
T PRK07281 176 DIGAAIQEYAESRGYGVVRDLVGHGVG 202 (286)
T ss_pred HHHHHHHHHHHHcCCccCCCeeeeeCC
Confidence 333344555666665543 56888888
No 361
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=24.26 E-value=1e+02 Score=25.89 Aligned_cols=47 Identities=15% Similarity=0.272 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCceEEEEEeChh--HHHHHHHHHhCcchhhhHHhhccc
Q psy16156 48 LACHRVVNHFAWTKFIWLGHSLG--GQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 48 ~dl~~~~~~l~~~~~~lvGhSmG--G~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
.-+.+++..+...+++|||-|== =-|=..++..+|+||.++-+=|..
T Consensus 266 ~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 266 QSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred cHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 34557888888899999997721 123345567899999998887743
No 362
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=24.22 E-value=1.2e+02 Score=26.54 Aligned_cols=44 Identities=11% Similarity=0.026 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhcc
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid~ 93 (260)
+..+.+.+.....+++.+|| ||.+++.+|....+.=..+.+++.
T Consensus 136 ~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~ 179 (438)
T PRK13512 136 TDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHR 179 (438)
T ss_pred HHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEec
Confidence 33444444444457999999 889999998765444446667663
No 363
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B.
Probab=24.12 E-value=1.3e+02 Score=22.28 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=40.7
Q ss_pred ccccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHH---HHH
Q psy16156 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTH---YAA 79 (260)
Q Consensus 3 ~~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~---~a~ 79 (260)
+|+++|+.+-+.|.+ .+++++|.-=-..++..|+....=+-+ +++....+...| .++.|+=.++|+..--. .|.
T Consensus 38 GNGRTydHLRe~~p~-R~I~vfDR~l~~hp~~~P~~~~~ilGd-i~~tl~~~~~~g-~~a~laHaD~G~g~~~~d~a~a~ 114 (160)
T PF12692_consen 38 GNGRTYDHLREIFPD-RRIYVFDRALACHPSSTPPEEDLILGD-IRETLPALARFG-AGAALAHADIGTGDKEKDDATAA 114 (160)
T ss_dssp TTSHHHHHHHHH--S-S-EEEEESS--S-GGG---GGGEEES--HHHHHHHHHHH--S-EEEEEE----S-HHHHHHHHH
T ss_pred CCCccHHHHHHhCCC-CeEEEEeeecccCCCCCCchHheeecc-HHHHhHHHHhcC-CceEEEEeecCCCCcchhHHHHH
Confidence 688999999999975 689999965444444334332221123 333333366666 56889989999875432 233
Q ss_pred hCcchhhhHHhh
Q psy16156 80 MFPQLMDRLILL 91 (260)
Q Consensus 80 ~~p~~v~~lvli 91 (260)
.-+..|..+...
T Consensus 115 ~lspli~~~la~ 126 (160)
T PF12692_consen 115 WLSPLIAPVLAP 126 (160)
T ss_dssp HHHHHHGGGEEE
T ss_pred hhhHHHHHHhcC
Confidence 334555555443
No 364
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=24.11 E-value=62 Score=26.67 Aligned_cols=28 Identities=18% Similarity=0.173 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHHcCCce-EEEEEeChhH
Q psy16156 44 LNYLLACHRVVNHFAWTK-FIWLGHSLGG 71 (260)
Q Consensus 44 ~~~a~dl~~~~~~l~~~~-~~lvGhSmGG 71 (260)
.+..+.+.+.++..|..+ .++.|||+|=
T Consensus 127 ~dV~~ai~~~i~~~G~~~~~~~~GHgig~ 155 (291)
T cd01088 127 GEIGEAIEEVIESYGFKPIRNLTGHSIER 155 (291)
T ss_pred HHHHHHHHHHHHHcCCEEeecCCccCccC
Confidence 344555677788888765 3788999984
No 365
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=23.54 E-value=2.3e+02 Score=23.14 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcC------CceEEEEEeChhHHHHHHHHHh
Q psy16156 15 LPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA------WTKFIWLGHSLGGQLGTHYAAM 80 (260)
Q Consensus 15 L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhSmGG~ia~~~a~~ 80 (260)
..++|.++.+|-+|....+. ...+.+..+.+... ...++||--+..|.=++.-+..
T Consensus 151 ~~~~~D~ViIDT~G~~~~d~----------~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~ 212 (272)
T TIGR00064 151 KARNIDVVLIDTAGRLQNKV----------NLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKV 212 (272)
T ss_pred HHCCCCEEEEeCCCCCcchH----------HHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHH
Confidence 34679999999999875431 12233333333322 4456666555555544444443
No 366
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=23.35 E-value=67 Score=24.83 Aligned_cols=41 Identities=22% Similarity=0.329 Sum_probs=31.2
Q ss_pred HHHHHHcCCceEEEEEeC-hhHHHHHHHHHhCcchhhhHHhhccc
Q psy16156 51 HRVVNHFAWTKFIWLGHS-LGGQLGTHYAAMFPQLMDRLILLDAM 94 (260)
Q Consensus 51 ~~~~~~l~~~~~~lvGhS-mGG~ia~~~a~~~p~~v~~lvlid~~ 94 (260)
.+..+.|...++.|+|-. ||+.||..+|.. .|..++++|.-
T Consensus 13 ~~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 13 PKIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 355667777889999975 888888888765 37788888854
No 367
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=23.34 E-value=74 Score=25.05 Aligned_cols=27 Identities=15% Similarity=0.225 Sum_probs=15.5
Q ss_pred HHHHHHHHHHcCCce-EEEEEeChhHHH
Q psy16156 47 LLACHRVVNHFAWTK-FIWLGHSLGGQL 73 (260)
Q Consensus 47 a~dl~~~~~~l~~~~-~~lvGhSmGG~i 73 (260)
.+.+.+++++.|... .+.+||++|-.+
T Consensus 138 ~~~~~~~~~~~G~~~~~~~~GHgiG~~~ 165 (238)
T cd01086 138 GHAIEKYAEKNGYSVVREFGGHGIGRKF 165 (238)
T ss_pred HHHHHHHHHHcCcceecCccccCCCCcc
Confidence 333455566666543 256788887653
No 368
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=23.28 E-value=1.1e+02 Score=23.94 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=18.8
Q ss_pred HHHHHHHHcCCceEEEEEeChhHHHHHHH
Q psy16156 49 ACHRVVNHFAWTKFIWLGHSLGGQLGTHY 77 (260)
Q Consensus 49 dl~~~~~~l~~~~~~lvGhSmGG~ia~~~ 77 (260)
.+...++..+--..+++=|||||..+.-+
T Consensus 113 ~ir~~~e~~d~~~~~~i~~slgGGTGSG~ 141 (216)
T PF00091_consen 113 QIRKEIEKCDSLDGFFIVHSLGGGTGSGL 141 (216)
T ss_dssp HHHHHHHTSTTESEEEEEEESSSSHHHHH
T ss_pred ccchhhccccccccceecccccceecccc
Confidence 34444444455678999999998865433
No 369
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=22.89 E-value=47 Score=18.72 Aligned_cols=14 Identities=36% Similarity=0.380 Sum_probs=11.6
Q ss_pred CCCeEEEEcCCCCC
Q psy16156 17 ARYYYVCIDLPGHG 30 (260)
Q Consensus 17 ~~y~vi~~Dl~GhG 30 (260)
+.|.+.+||+||.-
T Consensus 12 ~~y~~~~pdlpg~~ 25 (48)
T PF03681_consen 12 GGYVAYFPDLPGCF 25 (48)
T ss_dssp SSEEEEETTCCTCE
T ss_pred CeEEEEeCCccChh
Confidence 45899999999774
No 370
>PRK08671 methionine aminopeptidase; Provisional
Probab=22.75 E-value=60 Score=26.76 Aligned_cols=29 Identities=10% Similarity=0.066 Sum_probs=19.6
Q ss_pred hhhHHHHHHHHHHHcCCce-EEEEEeChhH
Q psy16156 43 WLNYLLACHRVVNHFAWTK-FIWLGHSLGG 71 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~~~-~~lvGhSmGG 71 (260)
..++.+.+.++++..|..+ .++.||++|=
T Consensus 127 ~~dv~~~i~~vi~~~G~~~~~~~~GHgiG~ 156 (291)
T PRK08671 127 VGEIGRVIEETIRSYGFKPIRNLTGHGLER 156 (291)
T ss_pred HHHHHHHHHHHHHHcCCcccCCCcccCcCC
Confidence 3344455667777887764 3689999983
No 371
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=22.65 E-value=1.5e+02 Score=22.01 Aligned_cols=39 Identities=21% Similarity=0.136 Sum_probs=27.6
Q ss_pred cchhhHHHHHHHHHHHcCCceEEEEEeC-hhHHHHHHHHHh
Q psy16156 41 LDWLNYLLACHRVVNHFAWTKFIWLGHS-LGGQLGTHYAAM 80 (260)
Q Consensus 41 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS-mGG~ia~~~a~~ 80 (260)
|+...+++-+.++++..+ -..+|+|+| .|.-++-++|.+
T Consensus 66 ~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~ 105 (168)
T cd01715 66 YLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAK 105 (168)
T ss_pred cChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHH
Confidence 556678888888888877 467777765 455666666665
No 372
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=22.62 E-value=4.7e+02 Score=22.09 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=53.1
Q ss_pred cccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcc
Q psy16156 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ 83 (260)
Q Consensus 4 ~~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~ 83 (260)
-.-.|..+...++++-++|.+ +|-.|.+.+ | .+++.+ ++.+..+++..+..-+.+|-...|-+|-- +-|-
T Consensus 151 gkiD~~~v~~~i~~~tkli~I-QRS~GY~~R-p---S~~I~e-I~~~i~~vk~inpn~ivFVDNCYGEFvE~----~EPt 220 (416)
T COG4100 151 GKIDIQAVKTAISDRTKLIGI-QRSKGYAWR-P---SLSIAE-IEEMITFVKEINPNVIVFVDNCYGEFVEE----KEPT 220 (416)
T ss_pred CcccHHHHHHhcCccceEEEE-EeccCcCCC-C---cccHHH-HHHHHHHHHhcCCCEEEEEeccchhhhhc----cCcc
Confidence 455799999999988899988 577777765 2 245555 44566778888878889999999987643 4455
Q ss_pred hhhh
Q psy16156 84 LMDR 87 (260)
Q Consensus 84 ~v~~ 87 (260)
.|..
T Consensus 221 ~vGa 224 (416)
T COG4100 221 HVGA 224 (416)
T ss_pred ccch
Confidence 4433
No 373
>KOG2100|consensus
Probab=22.59 E-value=2.4e+02 Score=27.04 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=39.1
Q ss_pred HHHHhccccE-EEEEeCCCCcchhhcchhhHHHHhhhhCCCCcEEEEEcC-CCCCCCCC-hHHHHHHHHhhh
Q psy16156 191 SIIRNIQCQT-LCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDS-GHDMELEE-PEKLSGLISDFL 259 (260)
Q Consensus 191 ~~~~~i~~P~-l~i~G~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-gH~~~~e~-p~~~~~~i~~fl 259 (260)
.....++.|. |+|+|..|..+...-+. ...+.++.... .+++.++|+ .|.+-.-. -..+...+..|+
T Consensus 675 ~~~~~~~~~~~LliHGt~DdnVh~q~s~-~~~~aL~~~gv-~~~~~vypde~H~is~~~~~~~~~~~~~~~~ 744 (755)
T KOG2100|consen 675 SPANNIKTPKLLLIHGTEDDNVHFQQSA-ILIKALQNAGV-PFRLLVYPDENHGISYVEVISHLYEKLDRFL 744 (755)
T ss_pred chhhhhccCCEEEEEcCCcCCcCHHHHH-HHHHHHHHCCC-ceEEEEeCCCCcccccccchHHHHHHHHHHH
Confidence 3456777787 99999998866431110 11233444332 377788885 89976533 234444555554
No 374
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional
Probab=22.58 E-value=3e+02 Score=23.63 Aligned_cols=41 Identities=10% Similarity=-0.138 Sum_probs=31.6
Q ss_pred ccchhhHHHHHHHHHHHcCCceEEEEEeChhH-HHHHHHHHhC
Q psy16156 40 LLDWLNYLLACHRVVNHFAWTKFIWLGHSLGG-QLGTHYAAMF 81 (260)
Q Consensus 40 ~~~~~~~a~dl~~~~~~l~~~~~~lvGhSmGG-~ia~~~a~~~ 81 (260)
.|..+.|++.+.+++++.+ -.++|+|+|.=| -+|-++|.+-
T Consensus 99 ~y~~e~~a~al~~li~~~~-P~~vL~~~T~~GrdlApRlAarL 140 (356)
T PLN00022 99 HPLAEPWAKLVVLAQQKGG-YSHILAASTSFGKNVLPRAAALL 140 (356)
T ss_pred ccChHHHHHHHHHHHHhcC-CCEEEECCCCchhHHHHHHHHHh
Confidence 4667889999999999987 567777776544 7888888763
No 375
>PRK04148 hypothetical protein; Provisional
Probab=22.55 E-value=1.8e+02 Score=20.93 Aligned_cols=43 Identities=12% Similarity=-0.052 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHHhCcchhhhHHhhc
Q psy16156 46 YLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD 92 (260)
Q Consensus 46 ~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvlid 92 (260)
+++-+.+-+......++..||--.|..+|..++... ..++.+|
T Consensus 4 i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaID 46 (134)
T PRK04148 4 IAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVID 46 (134)
T ss_pred HHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEE
Confidence 343333333332336799999998888998888542 2445555
No 376
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=22.52 E-value=1e+02 Score=24.02 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHcCCceEEEEEeChhHHHHHHHHH
Q psy16156 45 NYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAA 79 (260)
Q Consensus 45 ~~a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a~ 79 (260)
.....++-.+..|+.+.++++||+==|++...+..
T Consensus 77 ~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 77 SVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred chhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 55677788889999999999999998888765543
No 377
>KOG2248|consensus
Probab=22.37 E-value=88 Score=27.00 Aligned_cols=44 Identities=20% Similarity=0.306 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhH-HHHHHHHHhCcchhhhHHhhc
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGG-QLGTHYAAMFPQLMDRLILLD 92 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG-~ia~~~a~~~p~~v~~lvlid 92 (260)
.+||..-+..+=-...+|||||+=- .-|+.+ .||.-|+--++..
T Consensus 280 l~dvq~~l~~~~~~~TILVGHSLenDL~aLKl--~H~~ViDTa~lf~ 324 (380)
T KOG2248|consen 280 LEDVQKELLELISKNTILVGHSLENDLKALKL--DHPSVIDTAVLFK 324 (380)
T ss_pred HHHHHHHHHhhcCcCcEEEeechhhHHHHHhh--hCCceeeeeEEEe
Confidence 4556555655545678999999973 334443 5776655555544
No 378
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=22.32 E-value=2.1e+02 Score=24.00 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=30.4
Q ss_pred cchhhHHHHHHHHHHHcCCceEEEEEeCh-hHHHHHHHHHh
Q psy16156 41 LDWLNYLLACHRVVNHFAWTKFIWLGHSL-GGQLGTHYAAM 80 (260)
Q Consensus 41 ~~~~~~a~dl~~~~~~l~~~~~~lvGhSm-GG~ia~~~a~~ 80 (260)
|+.+.|++.+.+++++.+...++|+|+|- |--+|-++|.+
T Consensus 62 ~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~ 102 (313)
T PRK03363 62 RMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR 102 (313)
T ss_pred cChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHH
Confidence 66678889999999887655689998886 44566677665
No 379
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=21.86 E-value=13 Score=15.10 Aligned_cols=6 Identities=50% Similarity=1.165 Sum_probs=2.1
Q ss_pred EEeChh
Q psy16156 65 LGHSLG 70 (260)
Q Consensus 65 vGhSmG 70 (260)
|||=||
T Consensus 6 vGh~Mg 11 (14)
T PF02044_consen 6 VGHFMG 11 (14)
T ss_dssp HHCT--
T ss_pred eeeeec
Confidence 455555
No 380
>PRK12318 methionine aminopeptidase; Provisional
Probab=21.76 E-value=68 Score=26.48 Aligned_cols=20 Identities=15% Similarity=0.627 Sum_probs=9.6
Q ss_pred HHHHHHcCCceE-EEEEeChh
Q psy16156 51 HRVVNHFAWTKF-IWLGHSLG 70 (260)
Q Consensus 51 ~~~~~~l~~~~~-~lvGhSmG 70 (260)
.++++..|...+ +.+||++|
T Consensus 192 ~~~~~~~G~~~~~~~~GHgIG 212 (291)
T PRK12318 192 ENCADKYGFSVVDQFVGHGVG 212 (291)
T ss_pred HHHHHHcCCccCCCcccCCcC
Confidence 344444444321 35666666
No 381
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=21.57 E-value=1e+02 Score=18.69 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCCCCCCChHHHHHHHHhhh
Q psy16156 230 PKFHVEMVDSGHDMELEEPEKLSGLISDFL 259 (260)
Q Consensus 230 p~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 259 (260)
|+.......|-+.+-.|.++++.+.|.+|-
T Consensus 26 PDTvItL~~G~k~vV~Es~~eVi~ki~~y~ 55 (60)
T PF06289_consen 26 PDTVITLTNGKKYVVKESVEEVIEKIIEYR 55 (60)
T ss_pred CCeEEEEeCCCEEEEECCHHHHHHHHHHHH
Confidence 675555555567788999999999998874
No 382
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=21.47 E-value=2e+02 Score=21.10 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=27.1
Q ss_pred cchhhHHHHHHHHHHHcCCceEEEEEeC-hhHHHHHHHHHh
Q psy16156 41 LDWLNYLLACHRVVNHFAWTKFIWLGHS-LGGQLGTHYAAM 80 (260)
Q Consensus 41 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS-mGG~ia~~~a~~ 80 (260)
|+...+++-+.+++++.+.+ .+|+|+| .|.-++-++|.+
T Consensus 73 ~~~~~~a~~l~~~~~~~~~~-lVl~~~t~~g~~la~~lA~~ 112 (164)
T PF01012_consen 73 YDPEAYADALAELIKEEGPD-LVLFGSTSFGRDLAPRLAAR 112 (164)
T ss_dssp C-HHHHHHHHHHHHHHHT-S-EEEEESSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCC-EEEEcCcCCCCcHHHHHHHH
Confidence 55667888888999987644 7788876 555666666655
No 383
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.30 E-value=1.9e+02 Score=25.18 Aligned_cols=72 Identities=8% Similarity=-0.010 Sum_probs=39.4
Q ss_pred HhhhccCC--CCCeEEEEcCCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeC-hhHHHHHHHHHhCc-ch
Q psy16156 9 DKLLPLLP--ARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHS-LGGQLGTHYAAMFP-QL 84 (260)
Q Consensus 9 ~~~~~~L~--~~y~vi~~Dl~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS-mGG~ia~~~a~~~p-~~ 84 (260)
...+..+. ++|.+|.+|-+|....+ .+..+.+..+.+.......+||+-+ +++.-...++..+. -.
T Consensus 274 ~~al~~l~~~~~~D~VLIDTAGr~~~d----------~~~l~EL~~l~~~~~p~~~~LVLsag~~~~d~~~i~~~f~~l~ 343 (407)
T PRK12726 274 EEAVQYMTYVNCVDHILIDTVGRNYLA----------EESVSEISAYTDVVHPDLTCFTFSSGMKSADVMTILPKLAEIP 343 (407)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCccC----------HHHHHHHHHHhhccCCceEEEECCCcccHHHHHHHHHhcCcCC
Confidence 33344453 46899999999886422 1334555566666555555666643 33333334444442 23
Q ss_pred hhhHHh
Q psy16156 85 MDRLIL 90 (260)
Q Consensus 85 v~~lvl 90 (260)
+.++|+
T Consensus 344 i~glI~ 349 (407)
T PRK12726 344 IDGFII 349 (407)
T ss_pred CCEEEE
Confidence 566665
No 384
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=20.97 E-value=75 Score=17.75 Aligned_cols=13 Identities=31% Similarity=0.376 Sum_probs=10.4
Q ss_pred eEEEEcCCCCCCC
Q psy16156 20 YYVCIDLPGHGLS 32 (260)
Q Consensus 20 ~vi~~Dl~GhG~S 32 (260)
.+-+-|.||||+-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 4668899999974
No 385
>PRK13506 formate--tetrahydrofolate ligase; Provisional
Probab=20.87 E-value=1.6e+02 Score=26.80 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=48.9
Q ss_pred ccchHhhhccCCCCCeEEEEcCCCCCCCCCCCCCCccc-------hhhHHHHHHHHHHHcCCceEEEEEeCh--------
Q psy16156 5 AASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLD-------WLNYLLACHRVVNHFAWTKFIWLGHSL-------- 69 (260)
Q Consensus 5 ~~~w~~~~~~L~~~y~vi~~Dl~GhG~S~~~~~~~~~~-------~~~~a~dl~~~~~~l~~~~~~lvGhSm-------- 69 (260)
.-.|+++++.=.+.-|=|.+.+=|-...-...+++..+ +..++.|+..+-++++ =++||++.
T Consensus 174 ~I~w~Rv~DmNDR~LR~I~vglg~~~~G~~Re~gFdITvASEiMAIlcLa~dl~Dlk~Rl~---~ivv~~~~~g~pVta~ 250 (578)
T PRK13506 174 QILWKRVVDHNDRALRMITVGLGENGNGPEREDGFDITAASELMAILALSRDLKDMRQRIG---RLVLAYNLQGQPITAE 250 (578)
T ss_pred eeEEeecccccchhhhceeeCcCCCCCCCcccCCceeeHHHHHHHHHHHcCCHHHHHHHhh---cEEEEEcCCCCceeHH
Confidence 34789998866555677888775543222222333332 2245667777777775 27788876
Q ss_pred -----hHHHHHHHHHhCcchhhhH
Q psy16156 70 -----GGQLGTHYAAMFPQLMDRL 88 (260)
Q Consensus 70 -----GG~ia~~~a~~~p~~v~~l 88 (260)
|++.++.--+..|..|+.+
T Consensus 251 DL~~~GAm~~LLkDAikPNLvQTl 274 (578)
T PRK13506 251 DLGVAGAMTVIMKDAIEPTLMQTL 274 (578)
T ss_pred HccchHhHHHHHHHhccchhheec
Confidence 4555555455678887754
No 386
>PLN02154 carbonic anhydrase
Probab=20.69 E-value=1.5e+02 Score=24.50 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCCceEEEEEeChhHHHHHHHH
Q psy16156 47 LLACHRVVNHFAWTKFIWLGHSLGGQLGTHYA 78 (260)
Q Consensus 47 a~dl~~~~~~l~~~~~~lvGhSmGG~ia~~~a 78 (260)
...|+-.+..|+.+.++++|||==|.|...+.
T Consensus 153 ~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 153 NSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 45677788899999999999998777776554
No 387
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=20.66 E-value=1.4e+02 Score=22.62 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHHcCCceEEEEEeC
Q psy16156 43 WLNYLLACHRVVNHFAWTKFIWLGHS 68 (260)
Q Consensus 43 ~~~~a~dl~~~~~~l~~~~~~lvGhS 68 (260)
.....+.+..+++.....++.|.||.
T Consensus 98 ~~~~L~~~a~~L~~~p~~~i~V~GHT 123 (190)
T COG2885 98 AQATLDELAKYLKKNPITRILVEGHT 123 (190)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEecC
Confidence 44667777788888888999999994
No 388
>KOG2492|consensus
Probab=20.65 E-value=1.5e+02 Score=25.96 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCCCCccchhhHHHHHHHHHHHcCCceEEEEEeCh
Q psy16156 26 LPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSL 69 (260)
Q Consensus 26 l~GhG~S~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhSm 69 (260)
+||-|.|++.-.+.--...+--++...++.+.+..=+.+...||
T Consensus 391 iPgVglssdfitgfCgeTeedhq~t~sLlrqVgYdv~~lFaysm 434 (552)
T KOG2492|consen 391 IPGVGLSSDFITGFCGETEEDHQYTVSLLRQVGYDVVFLFAYSM 434 (552)
T ss_pred CCCCcceeeeEecccCCChHHHHHHHHHHHHhccCeeeeEEeee
Confidence 46666666533332111223345566777777777777777887
No 389
>PRK06193 hypothetical protein; Provisional
Probab=20.46 E-value=1.6e+02 Score=22.92 Aligned_cols=28 Identities=11% Similarity=-0.021 Sum_probs=21.6
Q ss_pred chhhHHHHHHHHHHHcC--CceEEEEEeCh
Q psy16156 42 DWLNYLLACHRVVNHFA--WTKFIWLGHSL 69 (260)
Q Consensus 42 ~~~~~a~dl~~~~~~l~--~~~~~lvGhSm 69 (260)
+...|.+++..+++.+. .+++.||||..
T Consensus 136 ~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp 165 (206)
T PRK06193 136 RNALLKAGLRPLLTTPPDPGTNTVLVGHDD 165 (206)
T ss_pred hHHHHHHHHHHHHhhCCCCCCeEEEEeCch
Confidence 34456688888888874 46899999995
No 390
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.11 E-value=79 Score=26.00 Aligned_cols=48 Identities=17% Similarity=0.065 Sum_probs=29.8
Q ss_pred HHHHHHHHHcCC---ceEEEEEeChhHHHHHHHHHh---CcchhhhHHhhcccC
Q psy16156 48 LACHRVVNHFAW---TKFIWLGHSLGGQLGTHYAAM---FPQLMDRLILLDAMN 95 (260)
Q Consensus 48 ~dl~~~~~~l~~---~~~~lvGhSmGG~ia~~~a~~---~p~~v~~lvlid~~~ 95 (260)
+.|.+-++.+-- -+.+|.|.|+|++-+...-.. .-+++.+.++..++.
T Consensus 94 ~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 94 EAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 334444445532 379999999998877654322 335677777776544
No 391
>PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Probab=20.02 E-value=2.1e+02 Score=27.81 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHHcCCceEEEEEe------ChhHHHHHHHHH
Q psy16156 44 LNYLLACHRVVNHFAWTKFIWLGH------SLGGQLGTHYAA 79 (260)
Q Consensus 44 ~~~a~dl~~~~~~l~~~~~~lvGh------SmGG~ia~~~a~ 79 (260)
...+..+.++++. .+++.|+|| ++|+++|+.-.+
T Consensus 354 Rvia~~L~elI~~--~d~ViI~gH~nPD~DAlGSalaL~~~l 393 (838)
T PRK14538 354 RVNAQNLVDILKK--NPHCFIMGHNHTDLDSLGSMIAFYKIA 393 (838)
T ss_pred HHHHHHHHHHHhc--CCeEEEEecCCCCchHHHHHHHHHHHH
Confidence 3455566666644 479999999 689999988755
Done!