RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16156
(260 letters)
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 146 bits (371), Expect = 5e-43
Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 22/261 (8%)
Query: 3 DNAASFDKLLP-LLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTK 61
+ ++ ++ L Y V DL GHG SSH L +L RV+
Sbjct: 37 EQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQP 96
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEK 121
+ +GHS+G L T A++ P+ + LIL++ + +++ L+
Sbjct: 97 LLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQL-----TTCLDYL 151
Query: 122 LNNRTQPVY-TKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKI 180
+ P++ S+L R + +S E + IL R GG +++D ++ +
Sbjct: 152 SSTPQHPIFPDVATAASRL--RQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRS 209
Query: 181 YLVMT-----EDQQHSIIRNIQCQTLCIL-SQDSFNRVWIVNENYIGTYCLYSRHPKFHV 234
L + Q ++++IQ T + NR + + +
Sbjct: 210 ILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQ-------QKMTMTQAKR 262
Query: 235 EMVDSGHDMELEEPEKLSGLI 255
+ GH++ ++ L+ LI
Sbjct: 263 VFLSGGHNLHIDAAAALASLI 283
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 101 bits (254), Expect = 6e-26
Identities = 31/258 (12%), Positives = 79/258 (30%), Gaps = 24/258 (9%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
A +F ++ LP + ID P G S + +++ A + HF + +
Sbjct: 54 STADNFANIIDKLPDSIGILTIDAPNSGYSPV-SNQANVGLRDWVNAILMIFEHFKFQSY 112
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKL 122
+ HS+GG + I L+ + + L + +
Sbjct: 113 LLCVHSIGGFAALQIMNQSSKACLGFIGLE-PTTVMIYRAGFSSDLYPQLALRRQKLKTA 171
Query: 123 NNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYL 182
+R + + L + S++ + L+ + N Q L +
Sbjct: 172 ADRLNYL-----------KDLSRSHFSSQQFKQLWRGYDYCQR---QLNDVQSLPDFKIR 217
Query: 183 VMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGHD 242
+ ++ + + ++ + ++ +E ++H + + + H
Sbjct: 218 LALGEEDFKTGISEKIPSIVFSESFR-EKEYLESE-------YLNKHTQTKLILCGQHHY 269
Query: 243 MELEEPEKLSGLISDFLD 260
+ E + + L
Sbjct: 270 LHWSETNSILEKVEQLLS 287
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 94.7 bits (236), Expect = 3e-23
Identities = 46/266 (17%), Positives = 86/266 (32%), Gaps = 30/266 (11%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
NA F+ L L + +C ++ G G S + M + YL ++ +F
Sbjct: 40 RNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERF 99
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKL 122
+ +G SLGG L AA P + +L D + + L ++R +
Sbjct: 100 VAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSP---EGLERIRGYV---------- 146
Query: 123 NNRTQPVYTKEQVVSKLKQRL---LLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNK 179
+ + T L++ + T+ V G F++D ++
Sbjct: 147 -GQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEP 205
Query: 180 IYLVMTEDQQHS----IIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVE 235
+ Q L + + S I++ P +
Sbjct: 206 FEAPVGATPQVDMWPLFDALATRPLLVLRGETS----DILSAQTAAKMA---SRPGVELV 258
Query: 236 MV-DSGHDMELEEPEKLSGLISDFLD 260
+ GH L+EPE ++ I L+
Sbjct: 259 TLPRIGHAPTLDEPESIA-AIGRLLE 283
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 85.2 bits (211), Expect = 1e-19
Identities = 52/268 (19%), Positives = 95/268 (35%), Gaps = 41/268 (15%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACH-----RVVNHF 57
NA ++D ++ L + +DLPGHG S+ G NY + V+
Sbjct: 92 QNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDG------NYSPQLNSETLAPVLREL 143
Query: 58 AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD---AMNQRKTKVEDTLTKVRDILTN 114
A +G SLGG AAM P L+ L+L+D + QR ++ ++
Sbjct: 144 APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALM-- 201
Query: 115 QMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQ 174
+ + Q + L + +F + +G +V+ +D
Sbjct: 202 ----------HGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDA 251
Query: 175 RLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKF-H 233
+ + +D + + + S V + L+ R F
Sbjct: 252 IRTFGDFAGLWDD-----VDALSAPITLVRGGSS----GFVTDQDTAE--LHRRATHFRG 300
Query: 234 VEMV-DSGHDMELEEPEKLSGLISDFLD 260
V +V SGH ++ ++P L ++ LD
Sbjct: 301 VHIVEKSGHSVQSDQPRALIEIVRGVLD 328
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 82.0 bits (203), Expect = 8e-19
Identities = 35/260 (13%), Positives = 78/260 (30%), Gaps = 46/260 (17%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA-CHRVVNHFAWTKF 62
N F +L L Y + +DL GHG S P + +++ +
Sbjct: 28 NLKIFGELEKYL-EDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVTKHQKNI 86
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKL 122
+G+S+GG + A + +++ L + +D + K+ + L E +
Sbjct: 87 TLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECI 146
Query: 123 NNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYL 182
P+ K E + +I+ ++ + + LK
Sbjct: 147 GGIDNPLSEK------------YFETLEKDPDIMINDLIACKL----IDLVDNLK----- 185
Query: 183 VMTEDQQHSIIRNIQCQTLCIL-SQDSFNRVWIVNE--NYIGTYCLYSRHPKFHVEMVDS 239
NI I+ + V + + + +
Sbjct: 186 ------------NIDIPVKAIVAKDELLTLVEYSEIIKKEV-------ENSELKI-FETG 225
Query: 240 GHDMELEEPEKLSGLISDFL 259
H + + + ++ I +F+
Sbjct: 226 KHFLLVVNAKGVAEEIKNFI 245
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 81.9 bits (203), Expect = 8e-19
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
NA + + L + + +DLPG G S F L D +L A K I
Sbjct: 25 NAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ-------APDKAI 77
Query: 64 WLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
WLG SLGG + + A P+ + L+ + +
Sbjct: 78 WLGWSLGGLVASQIALTHPERVRALVTVAS 107
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 82.1 bits (203), Expect = 2e-18
Identities = 52/260 (20%), Positives = 92/260 (35%), Gaps = 27/260 (10%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
N+A F+ L+ L R+ + +D GHGLS G + +Y ++ A
Sbjct: 79 SNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEAN--DYADDIAGLIRTLARGHA 136
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKL 122
I +GHSLG + AA +P L+ ++ +D +T+ D LE ++
Sbjct: 137 ILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDA-------------LEARV 183
Query: 123 NNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYL 182
N +Q + V + L R I ++ I DGG +
Sbjct: 184 NAGSQLFEDIKAVEAYLAGR--YPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTAR 241
Query: 183 VMTEDQQHSIIRNIQCQTLCIL-SQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV-DSG 240
+ D + R++ L + + + P V +V +
Sbjct: 242 GLRSDLVPA-YRDVTKPVLIVRGESSKLVSAAALAK-------TSRLRPDLPVVVVPGAD 293
Query: 241 HDMELEEPEKLSGLISDFLD 260
H + PE I++F+D
Sbjct: 294 HYVNEVSPEITLKAITNFID 313
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 81.3 bits (201), Expect = 2e-18
Identities = 43/265 (16%), Positives = 83/265 (31%), Gaps = 39/265 (14%)
Query: 4 NAASFDKLLPLLPARYYY--VCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTK 61
+ S L Y + +DLPG G S P + L L+ + +
Sbjct: 33 DKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIE--AIEEIIGARR 90
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM---NQRKTKVEDTLTKVRDILTNQMNL 118
FI GHS GG L A + L + + K + + + + N
Sbjct: 91 FILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENK 150
Query: 119 EEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKN 178
E + + V Q + ++ + + + F F+++LKN
Sbjct: 151 EYFADFLSMNVIINNQAWHDYQNLII------PGLQKEDKTFIDQLQNNYSFTFEEKLKN 204
Query: 179 KIYLVMTEDQQHSIIRNIQCQTLCIL--SQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236
N Q I+ D + L + + + +
Sbjct: 205 ---------------INYQFPFK-IMVGRNDQVVGYQEQLK-------LINHNENGEIVL 241
Query: 237 VD-SGHDMELEEPEKLSGLISDFLD 260
++ +GH++ +++ E + FLD
Sbjct: 242 LNRTGHNLMIDQREAVGFHFDLFLD 266
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 76.2 bits (188), Expect = 1e-16
Identities = 44/264 (16%), Positives = 96/264 (36%), Gaps = 36/264 (13%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
++ ++ + Y+ + IDLPGHG ++ R+++ +
Sbjct: 28 DSRTYHNHIEKFTDNYHVITIDLPGHGEDQS-SMDETWNFDYITTLLDRILDKYKDKSIT 86
Query: 64 WLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKL- 122
G+S+GG++ +YA + LIL K + ++ D ++ +
Sbjct: 87 LFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIE 146
Query: 123 ----NNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKN 178
+ P++ + + Q + + ++S + +A+ G + N RLK
Sbjct: 147 LFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMA-KALRDYGTGQMPNLWPRLK- 204
Query: 179 KIYLVMTEDQQHSIIRNIQCQTLCIL--SQDSFNRVWIVNENYIGTYCLYSRHPKFHVEM 236
I+ TL IL D V I + + + P ++
Sbjct: 205 ----------------EIKVPTL-ILAGEYDE-KFVQIAKK-------MANLIPNSKCKL 239
Query: 237 V-DSGHDMELEEPEKLSGLISDFL 259
+ +GH + +E+ ++ +I FL
Sbjct: 240 ISATGHTIHVEDSDEFDTMILGFL 263
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A,
alternative splicing, hydrolase, phosphoprotein, serine
esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Length = 316
Score = 73.7 bits (181), Expect = 2e-15
Identities = 49/280 (17%), Positives = 92/280 (32%), Gaps = 52/280 (18%)
Query: 3 DNAASFDKLLPLLPARYYY--VCIDLPGHGLSSHFPPGMLLDWLNYLLA-----CHRVVN 55
+A S+ + +R V +DL HG + P + VV
Sbjct: 49 HSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPE------DLSAETMAKDVGNVVE 102
Query: 56 HFAW---TKFIWLGHSLGGQLGTHYAAM-FPQLMDRLILLDAMNQRKTKVEDTLTKVRDI 111
+ +GHS+GG + H A+ + L ++D VE T +
Sbjct: 103 AMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDV-------VEGTAMDALNS 155
Query: 112 LTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFN 171
+ N + R + + E + + + + ESA + V +G
Sbjct: 156 MQNFLR------GRPKTFKSLENAIEWSVKSGQIRNL--ESARVSMVGQVKQCEGITSPE 207
Query: 172 ---FDQRLKNKIYLVMTEDQQHSIIR-------NIQCQTLCILSQDSFNRVWIVNENYIG 221
D +I L TE R + L +L+ + + IG
Sbjct: 208 GSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVD----RLDKDLTIG 263
Query: 222 TYCLYSRHPKFHVEMV-DSGHDMELEEPEKLSGLISDFLD 260
KF ++++ GH + + P+K++ ++ FL
Sbjct: 264 Q-----MQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLI 298
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 72.5 bits (178), Expect = 2e-15
Identities = 52/263 (19%), Positives = 95/263 (36%), Gaps = 41/263 (15%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPG----MLLDWLNYLLACHRVVNHFA 58
+ + L L + + +D+ HGLS P M D ++ L +
Sbjct: 27 GSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTL-------DALQ 79
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNL 118
K ++GHS+GG+ A+ P +D+L+ +D V+ + + +I +
Sbjct: 80 IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI-----APVDYHVRRHDEIFAAINAV 134
Query: 119 EEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKN 178
E T++Q + ++Q L E I F S DG + FN
Sbjct: 135 SE------SDAQTRQQAAAIMRQHL------NEEGVIQFLLK-SFVDGEWRFNVPVLWDQ 181
Query: 179 KIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV- 237
I L I +S V+E Y L ++ P+ ++
Sbjct: 182 -----YPHIVGWEKIPAWDHPALFIPGGNS----PYVSEQYRDD--LLAQFPQARAHVIA 230
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
+GH + E+P+ + I +L+
Sbjct: 231 GAGHWVHAEKPDAVLRAIRRYLN 253
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 72.1 bits (176), Expect = 1e-14
Identities = 38/277 (13%), Positives = 85/277 (30%), Gaps = 30/277 (10%)
Query: 8 FDKLLPLLPARYYYV----CIDLPGHGLSSHFPPGMLLD---WLNYLLACHRVVNHFAWT 60
+L+ Y + ID HG S+ G L W++ ++ +
Sbjct: 72 LPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGS 131
Query: 61 KF------IWLGHSLGGQLGTHYAAMFPQLMDRLILLD--AMNQRKTKVEDTLTKVRDIL 112
+ +GHS+GG + P L LIL++ + ++
Sbjct: 132 IDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQ 191
Query: 113 TNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTE------SAEILFTRAVSARDG 166
+ + + V ++ ++ E G
Sbjct: 192 IPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGG 251
Query: 167 GFVFNFDQRLKNKIYLVMTEDQQH--SIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYC 224
+Q Y+ M S ++ ++ +T+ I+ S W +N +
Sbjct: 252 PVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARS---NWCPPQNQLF--- 305
Query: 225 LYSRHPKFHVEMV-DSGHDMELEEPEKLSGLISDFLD 260
L +H++++ H + +E P+ + I+ +
Sbjct: 306 LQKTLQNYHLDVIPGGSHLVNVEAPDLVIERINHHIH 342
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 71.0 bits (174), Expect = 1e-14
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWT 60
+ + L+ L A + + + GHGLS P +++
Sbjct: 38 HDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQ----EQVKDALEILDQLGVE 93
Query: 61 KFIWLGHSLGGQLGTHYAAM-FPQLMDRLILLDA 93
F+ + HS GG + P+ R I++D
Sbjct: 94 TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127
Score = 27.8 bits (62), Expect = 3.0
Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 228 RHPKFHVEMV-DSGHDMELEEPEKLSGLISDFLD 260
+HP F + H ++ P++ + I +F
Sbjct: 237 QHPWFSYAKLGGPTHFPAIDVPDRAAVHIREFAT 270
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 70.0 bits (172), Expect = 2e-14
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPG-----MLLDWLNYLLACHRVVNHFA 58
+ + + L +L Y VC D G G + + L+ L
Sbjct: 27 SGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALV------AAG 80
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+ +GH+LG +G A +P + LI ++
Sbjct: 81 IEHYAVVGHALGALVGMQLALDYPASVTVLISVNG 115
Score = 26.8 bits (60), Expect = 6.4
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 233 HVEMVDSGHDMELEEPEKLSGLISDFLD 260
+ M GH + +PE + L+ + L
Sbjct: 231 KMVMPYGGHACNVTDPETFNALLLNGLA 258
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism;
1.90A {Burkholderia xenovorans}
Length = 266
Score = 69.6 bits (171), Expect = 3e-14
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWTK 61
+ + + + L + + D GHG S ++ L +++ +
Sbjct: 38 DLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIE----QLTGDVLGLMDTLKIAR 93
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+ G S+GG G AA ++R+ L +
Sbjct: 94 ANFCGLSMGGLTGVALAARHADRIERVALCNT 125
Score = 27.6 bits (62), Expect = 4.3
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 234 VEMVDSGHDMELEEPEKLSGLISDFLD 260
+D+ H +E + + + DFL
Sbjct: 237 YVELDASHISNIERADAFTKTVVDFLT 263
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure
initiative, MI center for structural genomics, MCSG;
HET: MES; 2.25A {Pseudomonas aeruginosa}
Length = 266
Score = 69.2 bits (170), Expect = 5e-14
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWTK 61
+D LP L + + D GHG SS P L L +++ +
Sbjct: 39 TLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLA----RLGEDVLELLDALEVRR 94
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+LG SLGG +G A PQ ++RL+L +
Sbjct: 95 AHFLGLSLGGIVGQWLALHAPQRIERLVLANT 126
Score = 28.0 bits (63), Expect = 3.3
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 235 EMVDSGHDMELEEPEKLSGLISDFLD 260
+ + H +E P+ G + FL
Sbjct: 240 VTLPAVHLSNVEFPQAFEGAVLSFLG 265
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 68.7 bits (168), Expect = 9e-14
Identities = 46/270 (17%), Positives = 89/270 (32%), Gaps = 26/270 (9%)
Query: 3 DNAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTK 61
A ++++ + +L Y V +D G SS P + H ++ +
Sbjct: 57 FCAGTWERTIDVLADAGYRVIAVDQVGFCKSSK-PAHYQYSFQQLAANTHALLERLGVAR 115
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEK 121
+GHS+GG L T YA ++P+ ++RL+L++ + K + D
Sbjct: 116 ASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWY-------- 167
Query: 122 LNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIY 181
R + E + + E E + +A R G Y
Sbjct: 168 ---RRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALT--Y 222
Query: 182 LVMTEDQQHSIIRNIQCQTLCI---------LSQDSFNRVWIVNENYIGT-YCLYSRHPK 231
++ + +Q TL + + + NY R P+
Sbjct: 223 DMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQ 282
Query: 232 FHVEMV-DSGHDMELEEPEKLSGLISDFLD 260
+ D GH +++ PE+ + + L
Sbjct: 283 ATLVEFPDLGHTPQIQAPERFHQALLEGLQ 312
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 68.1 bits (167), Expect = 1e-13
Identities = 36/263 (13%), Positives = 89/263 (33%), Gaps = 26/263 (9%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDW-LNYLLA-CHRVVNHFAWTK 61
+ + Y ++L G G S ++ + + + K
Sbjct: 35 YNDNGNTFANPFTDHYSVYLVNLKGCGNSD--SAKNDSEYSMTETIKDLEAIREALYINK 92
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVE-DTLTKVRDILTNQM-NLE 119
+ + GHS GG L YA + + ++I+ A ++ D++ +++ N++ ++
Sbjct: 93 WGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152
Query: 120 EKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNK 179
LN+ + ++ + + +E E A L + + F
Sbjct: 153 NALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYF--------- 203
Query: 180 IYLVMTEDQQHSIIRNIQCQTLCILS--QDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV 237
+ + ++ ++ + I D E + + P +
Sbjct: 204 RQVEYKDYDVRQKLKFVKIPSF-IYCGKHDVQCPYIFSCE-------IANLIPNATLTKF 255
Query: 238 -DSGHDMELEEPEKLSGLISDFL 259
+S H+ +EE +K + ++D L
Sbjct: 256 EESNHNPFVEEIDKFNQFVNDTL 278
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta
hydrolase, signaling protein; 2.50A {Bacillus subtilis}
PDB: 1wpr_A*
Length = 271
Score = 67.6 bits (166), Expect = 1e-13
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLAC--HRVVNHFAWTK 61
+ + ++ + P + + D G G S + A V +
Sbjct: 32 DQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKE 91
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+++GHS+G +G + P+L L+++
Sbjct: 92 TVFVGHSVGALIGMLASIRRPELFSHLVMVGP 123
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 67.7 bits (166), Expect = 2e-13
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFP-PGMLLDWLNYLLACHRVVNHFAWTK 61
+ +F + + +L ++ + +D PG+G S G + L + + +
Sbjct: 50 ASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALK--GLFDQLGLGR 107
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+G++LGG +A +P RL+L+
Sbjct: 108 VPLVGNALGGGTAVRFALDYPARAGRLVLMGP 139
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 67.4 bits (165), Expect = 2e-13
Identities = 37/261 (14%), Positives = 90/261 (34%), Gaps = 37/261 (14%)
Query: 6 ASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWL 65
A++ +P L Y + D+ G G + P +++ +++ K +
Sbjct: 42 ANWRLTIPALSKFYRVIAPDMVGFGFTDR-PENYNYSKDSWVDHIIGIMDALEIEKAHIV 100
Query: 66 GHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNR 125
G++ GG L A + + +DR++L+ A +T+ + + E + N
Sbjct: 101 GNAFGGGLAIATALRYSERVDRMVLMGAAG-----TRFDVTEGLNAVWGYTPSIENMRNL 155
Query: 126 TQPVYTKEQVVSK-LKQRLLLNEISTESAEILFT--RAVSARDGGFVFNFDQRLKNKIYL 182
+V+ L + I E + R + + D+ +
Sbjct: 156 LDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDI------ 209
Query: 183 VMTEDQQHSIIRNIQCQTLCIL--SQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV-DS 239
+ + +TL I+ +D + + L + + +
Sbjct: 210 -----------KTLPNETL-IIHGREDQVVPLS-------SSLRLGELIDRAQLHVFGRC 250
Query: 240 GHDMELEEPEKLSGLISDFLD 260
GH ++E+ ++ + L+ +F +
Sbjct: 251 GHWTQIEQTDRFNRLVVEFFN 271
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 67.0 bits (164), Expect = 3e-13
Identities = 37/266 (13%), Positives = 84/266 (31%), Gaps = 43/266 (16%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSS----HFPPGMLLDWLNYLLACHRVVNHFA 58
++ ++ ++P+L Y + +D+ G G ++ + + L+ +
Sbjct: 50 ESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNF----- 104
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNL 118
K +G+S+GG G + + +L++ L+L+ + ED + T
Sbjct: 105 DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFT----- 159
Query: 119 EEKLNNRTQPVYTKEQVVSK-LKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLK 177
E + + + + + + + + R+ G +F + +
Sbjct: 160 REGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFI- 218
Query: 178 NKIYLVMTEDQQHSIIRNIQCQTLCIL-SQDSFNRVWIVNENYIGTYCLYSRHP--KFHV 234
R +Q TL + D V Y ++
Sbjct: 219 ----------------RKVQVPTLVVQGKDDKVVPVE-------TAYKFLDLIDDSWGYI 255
Query: 235 EMVDSGHDMELEEPEKLSGLISDFLD 260
+ GH +E PE + FL
Sbjct: 256 -IPHCGHWAMIEHPEDFANATLSFLS 280
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 66.6 bits (163), Expect = 4e-13
Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 38/261 (14%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSH--FPPGMLLDWLNYLLACHRVVNHFAWTK 61
++ + + ++Y +D+ G S G D+ N+LL V ++ K
Sbjct: 79 SSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLD---VFDNLGIEK 135
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEK 121
+G SLGG ++ P+ + +L D K LT +E
Sbjct: 136 SHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHD-FYKYALGLTASNGVETF 194
Query: 122 LNNRT-QPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNKI 180
LN V + K ++ + DG D+ L
Sbjct: 195 LNWMMNDQNVLHPIFVKQFKAGVM--------WQDGSRNPNPNADGFPYVFTDEEL---- 242
Query: 181 YLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMV-DS 239
R+ + L +L + ++ + + S P E++ ++
Sbjct: 243 -------------RSARVPILLLLGEHE--VIYDPHS---ALHRASSFVPDIEAEVIKNA 284
Query: 240 GHDMELEEPEKLSGLISDFLD 260
GH + +E+P ++ + F +
Sbjct: 285 GHVLSMEQPTYVNERVMRFFN 305
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 65.4 bits (160), Expect = 9e-13
Identities = 40/264 (15%), Positives = 80/264 (30%), Gaps = 54/264 (20%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSH----FPPGMLLDWLNYLLACHRVVNHFA 58
F L L + + V D G+G S FP + ++
Sbjct: 36 GETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVD---LMKALK 92
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNL 118
+ K LG S GG AA +P + ++++ A + +RD+
Sbjct: 93 FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSK----- 147
Query: 119 EEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKN 178
+E + + E L+ AR + ++ K+
Sbjct: 148 --------------------------WSERTRKPLEALYGYDYFARTCEKWVDGIRQFKH 181
Query: 179 KIYLVMTEDQQHSIIRNIQCQTLCIL-SQDSFNRVWIVNENYIGTYCLYSRHP--KFHVE 235
+ + +QC L + +D + ++ + H+
Sbjct: 182 LPDGNICRHL----LPRVQCPALIVHGEKDPLVPRF-------HADFIHKHVKGSRLHL- 229
Query: 236 MVDSGHDMELEEPEKLSGLISDFL 259
M + H++ L ++ + L DFL
Sbjct: 230 MPEGKHNLHLRFADEFNKLAEDFL 253
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 65.4 bits (160), Expect = 1e-12
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 11 LLPLLPARYYYVCIDLPGHGLSSHFPPG--MLLDWLNYLLACHRVVNHFAWTKFIWLGHS 68
+ P + A Y + D PG S L + +++ + +G++
Sbjct: 56 VGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG---LMDALDIDRAHLVGNA 112
Query: 69 LGGQLGTHYAAMFPQLMDRLILLDA 93
+GG ++A +P + +LIL+
Sbjct: 113 MGGATALNFALEYPDRIGKLILMGP 137
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 65.0 bits (159), Expect = 1e-12
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPG---MLLDWLNYLLACHRVVNHFAW 59
+ A + +L L +DLPGHG + ++ + + H +
Sbjct: 28 SGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVT----SE 83
Query: 60 TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD 92
I +G+SLGG+L H A L
Sbjct: 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAI 116
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase;
2.60A {Pseudomonas putida}
Length = 264
Score = 64.8 bits (158), Expect = 1e-12
Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 13/114 (11%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPG-----MLLDWLNYLLACHRVVNHF 57
+ F L PLL ++ +C D GH G L L ++
Sbjct: 32 QDHRLFKNLAPLLARDFHVICPDWRGHDAKQT-DSGDFDSQTLAQDL------LAFIDAK 84
Query: 58 AWTKFIWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVEDTLTKVRD 110
F + S G + + + I++D + Q L + +
Sbjct: 85 GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQH 138
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 65.0 bits (159), Expect = 2e-12
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 5 AASFDKLLPLLPARYYYVCIDLPGHGLSSH--FPPGMLLDWLNYLLAC-HRVVNHFAWTK 61
A+++ ++P L ++ V DL G G S + PG ++ W+ + ++NHF K
Sbjct: 45 ASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEK 104
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
+G+S+GG + P+ D++ L+ ++
Sbjct: 105 SHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV 137
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 63.4 bits (154), Expect = 2e-12
Identities = 18/88 (20%), Positives = 27/88 (30%)
Query: 6 ASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWL 65
+ L L A Y V IDLPG G S + L VV+ + +
Sbjct: 49 QNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVI 108
Query: 66 GHSLGGQLGTHYAAMFPQLMDRLILLDA 93
SL G + + + +
Sbjct: 109 SPSLSGMYSLPFLTAPGSQLPGFVPVAP 136
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 64.0 bits (155), Expect = 3e-12
Identities = 36/270 (13%), Positives = 86/270 (31%), Gaps = 46/270 (17%)
Query: 1 MQDNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFA 58
+ + + V +D PG + P LA ++ +
Sbjct: 50 SCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLN 109
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQR-------KTKVEDTLTKVRDI 111
++ I +G G + + YA P ++ L+L++ K+ + + D+
Sbjct: 110 FSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDM 169
Query: 112 LTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFN 171
+ + +E+L+ ++ + R ++ L+ + + R
Sbjct: 170 ILGHLFSQEELSGNSELIQK---------YRGIIQHAPNLENIELYWNSYNNRRD----- 215
Query: 172 FDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDS--FNRVWIVNENYIGTYCLYSRH 229
+ + ++C + ++ + + V N T +
Sbjct: 216 --------------LNFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSF--- 258
Query: 230 PKFHVEMVDSGHDMELEEPEKLSGLISDFL 259
++M DSG +L +P KL+ FL
Sbjct: 259 ----LKMADSGGQPQLTQPGKLTEAFKYFL 284
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 63.9 bits (156), Expect = 4e-12
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLG 70
+ PL+ A Y + +D PG G S VV+ K LG+S+G
Sbjct: 59 IDPLVEAGYRVILLDCPGWGKSDS-VVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMG 117
Query: 71 GQLGTHYAAMFPQLMDRLILLDA 93
G + +P+ + +L+L+
Sbjct: 118 GHSSVAFTLKWPERVGKLVLMGG 140
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 63.6 bits (155), Expect = 5e-12
Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA-CHRVVNHFAWTKF 62
NA + L + V D G G S P L ++ L+ + +F
Sbjct: 38 NAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEALGVERF 97
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKT 99
L H G + FPQ ++L +N
Sbjct: 98 GLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWL 134
Score = 31.6 bits (72), Expect = 0.18
Identities = 6/32 (18%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 229 HPKFHVEMVDSGHDMELEEPEKLSGLISDFLD 260
V + ++GH + ++ PE + L
Sbjct: 244 RAPIRV-LPEAGHYLWIDAPEAFEEAFKEALA 274
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, alpha-beta hydrolase fold,
hydrolase; 2.00A {Oleispira antarctica}
Length = 282
Score = 63.4 bits (155), Expect = 6e-12
Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNY-LLAC--HRVVNHFAWT 60
+ + +LP L ++ + D G G S + + A ++
Sbjct: 40 DQNMWRFMLPELEKQFTVIVFDYVGSGQSDL-ESFSTKRYSSLEGYAKDVEEILVALDLV 98
Query: 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+GHS+ + + + + ++
Sbjct: 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICP 131
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Length = 291
Score = 62.6 bits (153), Expect = 9e-12
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNY---LLA--CHRVVNHFA 58
+ K+ PLL + V DL G+G SS P + +NY ++A V++
Sbjct: 37 THVMWHKIAPLLANNFTVVATDLRGYGDSSR-PAS-VPHHINYSKRVMAQDQVEVMSKLG 94
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+ +F +GH G ++ A P + +L LLD
Sbjct: 95 YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129
Score = 30.7 bits (70), Expect = 0.43
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 230 PKFHVEMVDSGHDMELEEPEKLSGLISDFL 259
+ + GH + E PE+ I +FL
Sbjct: 259 IDVSGQSLPCGHFLPEEAPEETYQAIYNFL 288
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta
hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris}
PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Length = 306
Score = 62.3 bits (152), Expect = 2e-11
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 6 ASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNY---LLA--CHRVVNHFAWT 60
+ ++ P L R+ + DLPG+G S P Y +A +
Sbjct: 47 VMWHRVAPKLAERFKVIVADLPGYGWSDM-PES-DEQHTPYTKRAMAKQLIEAMEQLGHV 104
Query: 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
F GH+ G ++ A P + +L +LD
Sbjct: 105 HFALAGHNRGARVSYRLALDSPGRLSKLAVLDI 137
Score = 30.7 bits (70), Expect = 0.47
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 230 PKFHVEMVDSGHDMELEEPEKLSGLISDFL 259
++SGH + E P++ + + F
Sbjct: 271 SDVQGAPIESGHFLPEEAPDQTAEALVRFF 300
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A
{Burkholderia SP} PDB: 1y37_A
Length = 304
Score = 60.8 bits (148), Expect = 4e-11
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 6 ASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNY---LLA--CHRVVNHFAWT 60
+ ++ PLL Y VC DL G+G SS P D NY +A ++ +
Sbjct: 39 HMWARVAPLLANEYTVVCADLRGYGGSSK--PVGAPDHANYSFRAMASDQRELMRTLGFE 96
Query: 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+F +GH+ GG+ G A P + L +LD
Sbjct: 97 RFHLVGHARGGRTGHRMALDHPDSVLSLAVLDI 129
Score = 29.9 bits (68), Expect = 0.65
Identities = 5/31 (16%), Positives = 11/31 (35%)
Query: 230 PKFHVEMVDSGHDMELEEPEKLSGLISDFLD 260
+ GH P+ + ++ +FL
Sbjct: 260 ANMRFASLPGGHFFVDRFPDDTARILREFLS 290
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 60.5 bits (147), Expect = 6e-11
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Query: 16 PARYYYVCIDLPGHGLSSHFPPGMLLDW-LNYLLA-CHRVVNHFAWTKFIWLGHSLGGQL 73
+ D G G S+H P W + H V ++ LG S GG L
Sbjct: 80 ETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGML 139
Query: 74 GTHYAAMFPQLMDRLILLDAM 94
G A P + L + ++
Sbjct: 140 GAEIAVRQPSGLVSLAICNSP 160
Score = 28.5 bits (64), Expect = 2.2
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
+ H LE+PE+ +++ FL
Sbjct: 298 GTSHCTHLEKPEEFRAVVAQFLH 320
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid
indole alkaloids, PNAE, hydrolase, serine esterase; HET:
CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Length = 264
Score = 58.4 bits (141), Expect = 2e-10
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 5 AASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
A + KL PLL + + V +DL G++ + + +Y V+ + +
Sbjct: 23 AWIWYKLKPLLESAGHKVTAVDLSAAGINPR-RLDEIHTFRDYSEPLMEVMASIPPDEKV 81
Query: 64 WL-GHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
L GHS GG +P+ + + + AM
Sbjct: 82 VLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 58.6 bits (142), Expect = 3e-10
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
+ S++ +P L Y V D G G SS G D L ++
Sbjct: 39 SGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQ--LLEQLELQNV 96
Query: 63 IWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEK 121
+G S+GG Y + + +++++ A+ K ED D T +
Sbjct: 97 TLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGV 156
Query: 122 LNNRTQ 127
+N+R
Sbjct: 157 INDRLA 162
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase,
hydrolase; 1.90A {Mycobacterium tuberculosis} PDB:
3e3a_A 3hys_A 3hzo_A
Length = 293
Score = 57.4 bits (139), Expect = 6e-10
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 7/85 (8%)
Query: 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWTKFIWLGHS 68
+ L A Y + D G G + + G + ++ +G S
Sbjct: 64 VPAFLAAGYRCITFDNRGIGATEN-AEGFTTQ----TMVADTAALIETLDIAPARVVGVS 118
Query: 69 LGGQLGTHYAAMFPQLMDRLILLDA 93
+G + + P+L+ +L+
Sbjct: 119 MGAFIAQELMVVAPELVSSAVLMAT 143
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase,
polyketide, tailoring enzyme, structural proteomics in
europe, spine; HET: AKT 1PE; 1.45A {Streptomyces
purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Length = 298
Score = 57.2 bits (138), Expect = 9e-10
Identities = 35/270 (12%), Positives = 72/270 (26%), Gaps = 35/270 (12%)
Query: 9 DKLLPLLPARYYYV-CIDLPGHGLSSHFPPGM----LLDWLNYLLACHRVVNHFAWTKFI 63
D+ L +V D G S+ + +A V++ + +
Sbjct: 41 DEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVA---VLDGWGVDRAH 97
Query: 64 WLGHSLGGQLGTHYAAMFPQLMDRLILLDA------MNQRKTKVEDTLTKVRDILTNQMN 117
+G S+G + A + L +L + +V + + Q
Sbjct: 98 VVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQP 157
Query: 118 LEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLK 177
+ L QP + V+K + + + + R
Sbjct: 158 FLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPY 217
Query: 178 NKIYLVMTEDQQHSIIRNIQCQTLCIL-SQDSFNRVWIVNENYIGTYCLYSRH-----P- 230
L + + + +R + TL I D + +H P
Sbjct: 218 AHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAP------------HGKHLAGLIPT 265
Query: 231 -KFHVEMVDSGHDMELEEPEKLSGLISDFL 259
+ E+ GH + L+ +I
Sbjct: 266 ARL-AEIPGMGHALPSSVHGPLAEVILAHT 294
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold,
epoxide degradation, epichlorohydrin; 2.10A
{Agrobacterium tumefaciens} SCOP: c.69.1.11
Length = 294
Score = 56.9 bits (138), Expect = 1e-09
Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNY---LLA--CHRVVNHFAWTKFIW 64
K++ L Y + DL G G S P L Y A +++ K
Sbjct: 47 KVIGPLAEHYDVIVPDLRGFGDSEK-PDLNDLS--KYSLDKAADDQAALLDALGIEKAYV 103
Query: 65 LGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+GH + + + + + + D
Sbjct: 104 VGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 56.3 bits (136), Expect = 1e-09
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
+ S+++ L A+ Y V D G G SS G D L V+
Sbjct: 35 DGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHT--VLETLDLRDV 92
Query: 63 IWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ +G S+G Y A + + + +L L ++ + +D
Sbjct: 93 VLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDD 134
Score = 26.6 bits (59), Expect = 9.4
Identities = 3/22 (13%), Positives = 10/22 (45%)
Query: 238 DSGHDMELEEPEKLSGLISDFL 259
+ H + ++++ + FL
Sbjct: 256 GAPHGLLWTHADEVNAALKTFL 277
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase,
hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F}
PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Length = 267
Score = 55.8 bits (134), Expect = 2e-09
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 5 AASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF-AWTKF 62
A + K++ L+ + + V +DL G++ + ++ +YL + A K
Sbjct: 25 AWCWYKIVALMRSSGHNVTALDLGASGINPK-QALQIPNFSDYLSPLMEFMASLPANEKI 83
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
I +GH+LGG + FP+ + + L +
Sbjct: 84 ILVGHALGGLAISKAMETFPEKISVAVFLSGL 115
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein,
structural genomics, protein structure initiative, PSI;
HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB:
1y7i_A* 1y7h_A*
Length = 273
Score = 55.7 bits (134), Expect = 2e-09
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
S+ KL PLL A + V +DL G L +Y L ++ + +
Sbjct: 16 GGWSWYKLKPLLEAAGHKVTALDLAASGTDLR-KIEELRTLYDYTLPLMELMESLSADEK 74
Query: 63 IWL-GHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
+ L GHSLGG +PQ + + L A
Sbjct: 75 VILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAF 107
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase,
catalysis, protonation state, AB initio calculations,
substrate bindin; 1.05A {Hevea brasiliensis} SCOP:
c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A
3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A
7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A
1dwp_A ...
Length = 257
Score = 55.5 bits (133), Expect = 2e-09
Identities = 33/265 (12%), Positives = 77/265 (29%), Gaps = 39/265 (14%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWT-K 61
A + KL PLL A + V +DL G+ + + Y + K
Sbjct: 15 GAWIWHKLKPLLEALGHKVTALDLAASGVDPR-QIEEIGSFDEYSEPLLTFLEALPPGEK 73
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA-MNQRKTKVEDTLTKVRDILTNQMNLEE 120
I +G S GG A + + + + ++ + + + K+ ++ + +
Sbjct: 74 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTY 133
Query: 121 KLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRL---- 176
+ T ++ L + L E E+ +
Sbjct: 134 FTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEG 193
Query: 177 ---KNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFH 233
KIY+ +D + Q +
Sbjct: 194 YGSIKKIYVWTDQD-----------EIFLPEFQLW----------------QIENYKPDK 226
Query: 234 V-EMVDSGHDMELEEPEKLSGLISD 257
V ++ H ++L + ++++ ++ +
Sbjct: 227 VYKVEGGDHKLQLTKTKEIAEILQE 251
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei
structural genomics consortium, TBSGC, hydrolase; 1.19A
{Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Length = 297
Score = 55.5 bits (134), Expect = 3e-09
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 13/94 (13%)
Query: 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPG--------MLLDWLNYLLACHRVVNHFAWTK 61
++P L V DL G G S P D+L L + +
Sbjct: 46 NIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGD-----H 100
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMN 95
+ + H G LG +A + + ++A+
Sbjct: 101 VVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV 134
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 55.6 bits (134), Expect = 4e-09
Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWT 60
+ S+++ L Y V D G G SS G D A + V+
Sbjct: 36 SGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYD----TFAADLNTVLETLDLQ 91
Query: 61 KFIWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ +G S+G Y + + + + L ++ K +D
Sbjct: 92 DAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDD 135
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 54.6 bits (132), Expect = 4e-09
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWT 60
+A ++ + L +R Y D G G S G D A +++ H
Sbjct: 31 DADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD----TFADDIAQLIEHLDLK 86
Query: 61 KFIWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ +G S+GG Y A + L+LL A+ + D
Sbjct: 87 EVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPD 130
Score = 26.9 bits (60), Expect = 6.8
Identities = 5/22 (22%), Positives = 11/22 (50%)
Query: 238 DSGHDMELEEPEKLSGLISDFL 259
D+ H + ++L+ + FL
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFL 269
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 54.6 bits (132), Expect = 5e-09
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWT 60
+A +D L A Y V D GHG SS G +D A VV H
Sbjct: 34 SADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHY----ADDVAAVVAHLGIQ 89
Query: 61 KFIWLGHSLGGQLGTHYAAMFPQ-LMDRLILLDAMNQRKTKVED 103
+ +GHS GG Y A P+ + + +L+ A+ +
Sbjct: 90 GAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPG 133
Score = 27.2 bits (61), Expect = 5.5
Identities = 3/23 (13%), Positives = 8/23 (34%)
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
H M + ++ + F+
Sbjct: 253 GYPHGMPTTHADVINADLLAFIR 275
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Length = 273
Score = 54.3 bits (131), Expect = 7e-09
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 4 NAASFDKLLPLLPARYY-YVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
NA S++ + L A+ Y + D GHG SS G +D LA ++ H
Sbjct: 31 NADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQ--LIEHLDLRDA 88
Query: 63 IWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ G S GG Y + + L+ A+ K E
Sbjct: 89 VLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEA 130
Score = 26.9 bits (60), Expect = 7.3
Identities = 3/23 (13%), Positives = 10/23 (43%)
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
+ H + ++L+ + F+
Sbjct: 250 GAPHGLTDTHKDQLNADLLAFIK 272
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase;
1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A
3pi6_A
Length = 301
Score = 54.2 bits (131), Expect = 7e-09
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 13/90 (14%)
Query: 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNY---LLA--CHRVVNHFAWTKFIW 64
+L+P L R+ + DLPG G S P Y +A H++ F+ +
Sbjct: 48 QLMPELAKRFTVIAPDLPGLGQSEP-PKT------GYSGEQVAVYLHKLARQFSPDRPFD 100
Query: 65 L-GHSLGGQLGTHYAAMFPQLMDRLILLDA 93
L H +G + RL+ ++A
Sbjct: 101 LVAHDIGIWNTYPMVVKNQADIARLVYMEA 130
Score = 26.4 bits (59), Expect = 8.6
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 230 PKFHVEMV-DSGHDMELEEPEKLSGLISDFL 259
++ GH + E ++ L+ DFL
Sbjct: 261 EDVEGHVLPGCGHWLPEECAAPMNRLVIDFL 291
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like
hydrolase, structural genomi center for structural
genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm
1728}
Length = 207
Score = 53.3 bits (128), Expect = 9e-09
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 5/100 (5%)
Query: 3 DNAASFDK--LLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHF 57
+ +DK L Y V D PG G S+ + A +
Sbjct: 38 FTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKAN 97
Query: 58 AWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQR 97
+ + +G S+GG + +P ++D +I +
Sbjct: 98 GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE 137
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A
{Streptomyces aureofaciens} SCOP: c.69.1.12
Length = 274
Score = 52.7 bits (127), Expect = 2e-08
Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 4 NAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKF 62
N ++ L + Y D GHG S+ G D L ++
Sbjct: 31 NGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLND--LLTDLDLRDV 88
Query: 63 IWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ HS+GG Y + +LL A+ K +
Sbjct: 89 TLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDK 130
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold,
cyanogenesis; 2.50A {Arabidopsis thaliana}
Length = 258
Score = 52.3 bits (125), Expect = 3e-08
Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 49/267 (18%)
Query: 5 AASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHF-AWTKF 62
A + KL PLL + + V ++L G+ P + Y + +
Sbjct: 17 AWIWYKLKPLLESAGHRVTAVELAASGIDPR-PIQAVETVDEYSKPLIETLKSLPENEEV 75
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTK-VEDTLTKVRDILTNQMNLEEK 121
I +G S GG A +FP + L+ L+A T L K ++ + E
Sbjct: 76 ILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFS 135
Query: 122 LNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKN--- 178
+ + ++ K + L E E+ + ++
Sbjct: 136 SHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGY 195
Query: 179 ----KIYLVMTEDQ------QHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSR 228
++Y++ +ED+ +I N
Sbjct: 196 GSVQRVYVMSSEDKAIPCDFIRWMIDNF-------------------------------- 223
Query: 229 HPKFHVEMVDSGHDMELEEPEKLSGLI 255
+ E+ H + L +P+KL +
Sbjct: 224 NVSKVYEIDGGDHMVMLSKPQKLFDSL 250
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane
dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase;
0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB:
1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A
1iz8_A* 1k5p_A 1k63_A 1k6e_A
Length = 302
Score = 52.5 bits (126), Expect = 3e-08
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 13/96 (13%)
Query: 7 SFDKLLPLLPARYYYVCIDLPGHGLSSHFPPG--------MLLDWLNYLLACHRVVNHFA 58
+ ++P + DL G G S P D+L+ L + +
Sbjct: 44 LWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGD--- 100
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
+ + + H G LG +A + + + ++A+
Sbjct: 101 --RVVLVVHDWGSALGFDWARRHRERVQGIAYMEAI 134
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 52.3 bits (126), Expect = 3e-08
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
Query: 4 NAASFDKLLPLLPARYY-YVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWT 60
+ S+++ L Y + D G G SS G D A + V+
Sbjct: 35 SGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYD----TFAADLNTVLETLDLQ 90
Query: 61 KFIWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ +G S G Y + + + ++ L ++ K +D
Sbjct: 91 DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD 134
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 52.3 bits (124), Expect = 4e-08
Identities = 32/219 (14%), Positives = 64/219 (29%), Gaps = 28/219 (12%)
Query: 14 LLPARYYYVCIDLPGHGLSSHFPPGML-----LDWLNYLLACHRVVN----HFAWTKFIW 64
L + ID H + L W ++ VV+ +
Sbjct: 89 LARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYL 148
Query: 65 LGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVEDTLT----KVRDILTNQMNLE 119
G S GG +Y++++ + LILLD + T + ++ + +
Sbjct: 149 AGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVI 208
Query: 120 EKLNNRTQPVYTK----------EQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFV 169
P+++ + + L+ + T SA D +
Sbjct: 209 PSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPI 268
Query: 170 F-NFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQD 207
+FD ++ L E I T+ +S+
Sbjct: 269 LASFDPYWPYRLSL---ERDLKFDYEGILVPTIAFVSER 304
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain,
catalytic triad (A His272, Glu130), mutant, I135F,
haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A
3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A
Length = 299
Score = 51.5 bits (124), Expect = 7e-08
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 12/89 (13%)
Query: 10 KLLPLLPARYYYVCIDLPGHGLSSHFPPG-----MLLDWLNYLLACHRVVNHFAWTKFIW 64
++P + + + DL G G S P + +L+ + + +
Sbjct: 50 NIIPHVAPSHRCIAPDLIGMGKSDK-PDLDYFFDDHVRYLDAFI------EALGLEEVVL 102
Query: 65 LGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+ H G LG H+A P+ + + ++
Sbjct: 103 VIHDWGSALGFHWAKRNPERVKGIACMEF 131
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 50.6 bits (121), Expect = 9e-08
Identities = 24/185 (12%), Positives = 45/185 (24%), Gaps = 24/185 (12%)
Query: 3 DNAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA--W 59
+ + + L Y V GHG + + V H +
Sbjct: 33 GSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKY 92
Query: 60 TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLE 119
K G SLGG P + + + K + K + +
Sbjct: 93 AKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKS 152
Query: 120 EKLNNRTQPVYTKEQVVS-------------KLKQRLLL------NEISTESAEILFTRA 160
++ Y Q+ + +KQ + + A L
Sbjct: 153 DESTQILA--YLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDAL 210
Query: 161 VSARD 165
++A
Sbjct: 211 INAAR 215
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 50.8 bits (122), Expect = 1e-07
Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
A L L + +C D G G S PP + + L A +++ F+
Sbjct: 35 TRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVEREIEDLAA---IIDAAGGAAFV 91
Query: 64 WLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
G S G L AA + RL + +
Sbjct: 92 -FGMSSGAGLSLLAAASGLPI-TRLAVFEP 119
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase,
luciferase, oxidoreductase; 1.40A {Renilla reniformis}
PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Length = 318
Score = 50.9 bits (122), Expect = 1e-07
Identities = 42/274 (15%), Positives = 82/274 (29%), Gaps = 48/274 (17%)
Query: 7 SFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACH-----RVVNHFAWTK 61
+ ++P + + DL G G S G +Y L H K
Sbjct: 58 LWRHVVPHIEPVARCIIPDLIGMGKSGKSGNG------SYRLLDHYKYLTAWFELLNLPK 111
Query: 62 FIWL-GHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEE 120
I GH G L HYA + ++ ++++ ++ DI + E
Sbjct: 112 KIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGE 171
Query: 121 KL---NNRTQPVYTKEQVVSKLK-------QRLLLNEISTESAEILFTRAVSARDGGFVF 170
K+ NN +++ KL+ + + + R + GG
Sbjct: 172 KMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPD 231
Query: 171 NFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENYIGTYCL--YSR 228
YL ++D L +I ++ + + ++
Sbjct: 232 VVQIVRNYNAYLRASDD----------LPKL-----------FIESDPGFFSNAIVEGAK 270
Query: 229 H-PKFHVEMVDSGHDMELEE-PEKLSGLISDFLD 260
P V H E+ P+++ I F++
Sbjct: 271 KFPNTEFVKVKGLH-FLQEDAPDEMGKYIKSFVE 303
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A
{Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Length = 316
Score = 49.2 bits (118), Expect = 3e-07
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 7 SFDKLLPLLPARYYYVCIDLPGHGLSSHFPPG----MLLDWLNYLLACHRVVNHFAWTKF 62
+ +LPL+ + + DL G G S + +L + T
Sbjct: 44 IWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHVRYL------DAFIEQRGVTSA 97
Query: 63 IWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
+ G L H AA P + L ++ +
Sbjct: 98 YLVAQDWGTALAFHLAARRPDFVRGLAFMEFI 129
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 48.6 bits (116), Expect = 4e-07
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 3 DNAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLL-----DWLNYLLACHRVVNH 56
N+A L L ++ Y GHG+ P L+ DW ++ + + +
Sbjct: 27 GNSADVRMLGRFLESKGYTCHAPIYKGHGVP----PEELVHTGPDDWWQDVMNGYEFLKN 82
Query: 57 FAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAM 94
+ K G SLGG P ++ ++ + A
Sbjct: 83 KGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAP 118
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 48.6 bits (116), Expect = 6e-07
Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 33/267 (12%)
Query: 7 SFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPG------MLLDWLNYLLACHRVVNHFAW 59
+ K++P+ V D G G S ++L L+
Sbjct: 62 LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALI------ERLDL 115
Query: 60 TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLE 119
+ GG LG P RLI+++A + +
Sbjct: 116 RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPA-DGFTA 174
Query: 120 EKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTRAVSARDGGFVFNFDQRLKNK 179
K + T +Q + + L E S +A F S + G F +++
Sbjct: 175 WKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAP--FPDT-SYQAGVRKFPKMVAQRDQ 231
Query: 180 IYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVW-----IVNENYIGTYCLYSRHPKFHV 234
+ ++ + + QT ++ + + +
Sbjct: 232 AXIDISTEAISFWQNDWNGQTFMA---------IGMKDKLLGPDVMYPMKALINGCPEPL 282
Query: 235 EMVDSGHDMELEE-PEKLSGLISDFLD 260
E+ D+GH E + + F +
Sbjct: 283 EIADAGH-FVQEFGEQVAREALKHFAE 308
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 48.0 bits (115), Expect = 8e-07
Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 8/104 (7%)
Query: 4 NAASFDKLLPLLPARYY-YVCIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAWT 60
+A +D + + Y + D GHG S G +D A +
Sbjct: 33 SADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDT----YAADVAALTEALDLR 88
Query: 61 KFIWLGHSLGGQLGTHYAAMF-PQLMDRLILLDAMNQRKTKVED 103
+ +GHS GG Y A P + + +L+ A+ K +
Sbjct: 89 GAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDT 132
Score = 27.2 bits (61), Expect = 5.4
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
H M PE L+ + F+
Sbjct: 252 GLPHGMLSTHPEVLNPDLLAFVK 274
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged
active site, prolyl peptidase; 1.80A {Thermoplasma
acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A
1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A*
1xqx_A* 1xqy_A 1xqv_A
Length = 293
Score = 47.2 bits (113), Expect = 2e-06
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 6/90 (6%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDW-LNYLLA-CHRVVNHFA-WT 60
+ L + + D G G S + ++Y + + +
Sbjct: 41 SHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQS---KFTIDYGVEEAEALRSKLFGNE 97
Query: 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90
K +G S GG L YA + + LI+
Sbjct: 98 KVFLMGSSYGGALALAYAVKYQDHLKGLIV 127
Score = 27.2 bits (61), Expect = 5.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
D H E+ E + L+SDF+
Sbjct: 268 DCSHLTMWEDREGYNKLLSDFIL 290
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 47.1 bits (112), Expect = 2e-06
Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 12/134 (8%)
Query: 7 SFDKLLPLLPARYY-YVCIDLPGHGLSSHFPPGMLLDWLNYLLACHR-----VVNHFAWT 60
+ K+LP+ A V DL G G S D Y HR ++
Sbjct: 61 LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT-----DDAVYTFGFHRRSLLAFLDALQLE 115
Query: 61 KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEE 120
+ + GG LG PQL+DRLI+++ RD + N +L+
Sbjct: 116 RVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDV 175
Query: 121 -KLNNRTQPVYTKE 133
KL R P T
Sbjct: 176 GKLMQRAIPGITDA 189
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 46.5 bits (111), Expect = 2e-06
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 20 YYVC-IDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH----FAWTKFIWLGHSLGGQLG 74
V D GHG S ++ D+ ++ + V+ + LGHS+GG +
Sbjct: 70 LLVFAHDHVGHGQSEG-ERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA 128
Query: 75 THYAAMFPQLMDRLILLDAM 94
AA P ++L+ +
Sbjct: 129 ILTAAERPGHFAGMVLISPL 148
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 46.6 bits (111), Expect = 3e-06
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 20 YYVC-IDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNH----FAWTKFIWLGHSLGGQLG 74
V D GHG S ++ D+ ++ + V+ + LGHS+GG +
Sbjct: 88 LLVFAHDHVGHGQSEG-ERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA 146
Query: 75 THYAAMFPQLMDRLILLDAM 94
AA P ++L+ +
Sbjct: 147 ILTAAERPGHFAGMVLISPL 166
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 46.3 bits (110), Expect = 3e-06
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 19 YYYVCIDLPGHGLSS-HFPPGMLLDWLNYLLACHRVVNHFA----WTKFIWLGHSLGGQL 73
V D GHG S F +L+ + A ++N+ +GH+ GG +
Sbjct: 76 IASVRFDFNGHGDSDGKFENMTVLNEIEDANA---ILNYVKTDPHVRNIYLVGHAQGGVV 132
Query: 74 GTHYAAMFPQLMDRLILL 91
+ A ++P L+ +++LL
Sbjct: 133 ASMLAGLYPDLIKKVVLL 150
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
2.20A {Unidentified}
Length = 309
Score = 45.4 bits (108), Expect = 6e-06
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 13 PLLPARYYYVCIDLPGHGLSSHFPPG----MLLDWLNYLLACHRVVNHFAWTKFIWLGHS 68
++ A Y V DL G G S+ + +++ + + + + H
Sbjct: 51 YVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDGFI------DALGLDDMVLVIHD 104
Query: 69 LGGQLGTHYAAMFPQLMDRLILLDAM 94
G +G +A + P + + ++A+
Sbjct: 105 WGSVIGMRHARLNPDRVAAVAFMEAL 130
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 45.8 bits (108), Expect = 9e-06
Identities = 45/257 (17%), Positives = 84/257 (32%), Gaps = 91/257 (35%)
Query: 33 SHFPPGMLLD-----------W--------LNYLLACHRVVNHFAWTKFIWLGHSLGGQL 73
S GM +D W Y + +V + I G G ++
Sbjct: 1626 SQEQ-GMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRI 1684
Query: 74 GTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQM--NLEEKLNNRTQPVYT 131
+Y+AM + + + K K E ++ + T+ + + L+ TQ +T
Sbjct: 1685 RENYSAM---------IFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLS-ATQ--FT 1732
Query: 132 KEQ----VVSK-----LKQRLLLNE---------------------ISTESA-EILFTR- 159
Q ++ K LK + L+ +S ES E++F R
Sbjct: 1733 --QPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRG 1790
Query: 160 -----AVSARDGGFVFNFDQRLKN--KIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRV 212
AV RD N+ N ++ +++ ++ + +T ++
Sbjct: 1791 MTMQVAV-PRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVE------- 1842
Query: 213 WIVNEN-----YI--GT 222
IVN N Y+ G
Sbjct: 1843 -IVNYNVENQQYVAAGD 1858
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 44.8 bits (106), Expect = 9e-06
Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 11/81 (13%)
Query: 19 YYYVCIDLPGHGLSSHFPPGMLL-----DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQL 73
Y L GHG + DW+ + + + G S+GG L
Sbjct: 68 YTVCLPRLKGHGTH----YEDMERTTFHDWVASVEEGYGWLKQ-RCQTIFVTGLSMGGTL 122
Query: 74 GTHYAAMFPQLMDRLILLDAM 94
+ A P + ++ ++A
Sbjct: 123 TLYLAEHHPDI-CGIVPINAA 142
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein,
structural genomics, NPPSFA; 2.00A {Thermus
thermophilus} SCOP: c.69.1.39
Length = 131
Score = 42.4 bits (99), Expect = 2e-05
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 5 AASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIW 64
A + LP Y + +DLPG+G + P + +++
Sbjct: 29 AEEASRWPEALPEGYAFYLLDLPGYGR-TEGPRMAPEELAHFVAG---FAVMMNLGAPWV 84
Query: 65 LGHSLGGQLGTHYAAM 80
L LG LG H A+
Sbjct: 85 LLRGLGLALGPHLEAL 100
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 41.1 bits (96), Expect = 2e-04
Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 26/191 (13%)
Query: 14 LLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAW---TKFIWLGHSLG 70
+L D PG G + D+ Y A ++ LG SLG
Sbjct: 175 VLDRGMATATFDGPGQGEMFE-YKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLG 233
Query: 71 GQLGTHYAAMFPQLMDRLILLDAM-NQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPV 129
G AA P+L I + +E LTK ++++ E+
Sbjct: 234 GNYALKSAACEPRL-AACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAA 292
Query: 130 YTKEQVVSKLKQRLLL-----NEISTESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVM 184
V+S++ + +E+ + + + + LV+
Sbjct: 293 LETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAE---------------HLNLVV 337
Query: 185 TEDQQHSIIRN 195
+D H
Sbjct: 338 EKDGDHCCHNL 348
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural
mycobacterium tuberculosis structural proteomics
project, X hydrolase; 2.10A {Mycobacterium tuberculosis}
PDB: 2zjf_A*
Length = 356
Score = 41.1 bits (96), Expect = 2e-04
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 11 LLPLLPARYYYVCIDLPGHGLSSHFPPGM----LLDWLNYLLACHRVVNHFAWTKFIWLG 66
+ L A Y V ID G+G SS + + + ++ V++ + + +G
Sbjct: 47 IPALAGAGYRVVAIDQRGYGRSSK-YRVQKAYRIKELVGDVVG---VLDSYGAEQAFVVG 102
Query: 67 HSLGGQLGTHYAAMFPQLMDRLILLDA 93
H G + +A + P ++ +
Sbjct: 103 HDWGAPVAWTFAWLHPDRCAGVVGISV 129
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 40.4 bits (95), Expect = 2e-04
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 19 YYYVCIDLPGHGLSS-HFPPGMLLDWLNYLLACHRVVNHFAWTKFI----WLGHSLGGQL 73
+ D+ GHG S F L WL +LA VV++ F+ GHS GG
Sbjct: 57 VATLRADMYGHGKSDGKFEDHTLFKWLTNILA---VVDYAKKLDFVTDIYMAGHSQGGLS 113
Query: 74 GTHYAAMFPQLMDRLILL 91
AAM ++ LI L
Sbjct: 114 VMLAAAMERDIIKALIPL 131
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic
residues, glycoprotein, hydrolase, lipid degradation,
zymogen, disulf; HET: NAG BTB; 1.49A {Candida
antarctica} PDB: 3icw_A*
Length = 316
Score = 40.5 bits (94), Expect = 3e-04
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 11 LLPLLPARYYYVC-IDLPGHGLSSHFPPG-MLLDWLNYLLACHRVVNHFAWTKFIWLGHS 68
+PL Y C I P L+ +++ + L A K L S
Sbjct: 86 WIPLSAQLGYTPCWISPPPFMLNDTQVNTEYMVNAITTLYA------GSGNNKLPVLTWS 139
Query: 69 LGGQLGTHYAAMFP---QLMDRLILLDAMNQ 96
GG + FP +DRL+ +
Sbjct: 140 QGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism,
detoxification, magnesium, metal-binding, peroxisome;
HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P*
1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A*
1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Length = 555
Score = 40.3 bits (94), Expect = 4e-04
Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Query: 3 DNAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPG--------MLLDWLNYLLACHRV 53
++ S+ +P L Y V +D+ G+G SS PP + + ++
Sbjct: 269 ESWYSWRYQIPALAQAGYRVLAMDMKGYGESSA-PPEIEEYCMEVLCKE----MVT---F 320
Query: 54 VNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91
++ ++ +++GH GG L + A +P+ + + L
Sbjct: 321 LDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASL 358
Score = 27.2 bits (60), Expect = 6.1
Identities = 7/32 (21%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 230 PKFHVEMV-DSGHDMELEEPEKLSGLISDFLD 260
P + D GH ++++P +++ ++ +LD
Sbjct: 512 PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida
antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A*
1tcc_A*
Length = 317
Score = 39.4 bits (91), Expect = 7e-04
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 11 LLPLLPARYYYVC-IDLPGHGLSSHFPPG-MLLDWLNYLLACHRVVNHFAWTKFIWLGHS 68
+PL Y C I P L+ +++ + L A K L S
Sbjct: 52 WIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYA------GSGNNKLPVLTWS 105
Query: 69 LGGQLGTHYAAMFP---QLMDRLILLDAMNQ 96
GG + FP +DRL+ +
Sbjct: 106 QGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic
acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET:
2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D
1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A
2es4_A 1tah_B 1qge_D 1qge_E
Length = 320
Score = 39.3 bits (91), Expect = 8e-04
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 8 FDKLLPLLPARYYYVCI-DLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLG 66
+ + L R V + +L G S P G L Y+ V+ TK +G
Sbjct: 30 WYGIQEDLQQRGATVYVANLSGFQ-SDDGPNGRGEQLLAYV---KTVLAATGATKVNLVG 85
Query: 67 HSLGGQLGTHYAAMFPQLMDRLILLDAMNQ 96
HS GG + AA+ P L+ + + ++
Sbjct: 86 HSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta
hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces
venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A
1mnq_A
Length = 319
Score = 37.6 bits (87), Expect = 0.003
Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACH--RVVNHFAWTK 61
F +L ++ + LPG+G + +L L+ L ++
Sbjct: 103 GPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAP 162
Query: 62 FIWLGHSLGGQLGTHYAAMFPQLMDR----LILLDA 93
+ LGH+ G L A + ++L+D
Sbjct: 163 VVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDP 198
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus
subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A*
2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A
3qmm_A
Length = 181
Score = 36.3 bits (84), Expect = 0.004
Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 8/98 (8%)
Query: 3 DNAASFDKLLPLLPARYYYVC-IDLPGHGLSSHFPPGMLLDWLNYLLAC-HRVVNHFAWT 60
+ +F + L ++ + + G + L +V++
Sbjct: 14 GASFNFAGIKSYLVSQGWSRDKLYAVDFW----DKTGTNYNNGPVLSRFVQKVLDETGAK 69
Query: 61 KFIWLGHSLGGQLGTHYAAMF--PQLMDRLILLDAMNQ 96
K + HS+GG +Y + ++ L N+
Sbjct: 70 KVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANR 107
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB:
3cxu_A*
Length = 328
Score = 37.0 bits (86), Expect = 0.004
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 3 DNAASFDKLLPLLPARYYYV-CIDLPGHGLSSHFPPGMLLDWLNYLLA--CHRVVNHFAW 59
+ S+ + L R Y DL G+G ++ P + L ++ A
Sbjct: 42 ELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAP 101
Query: 60 T--KFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
K + H G + H P + L+ L
Sbjct: 102 NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A
{Amycolatopsis mediterranei} PDB: 3flb_A*
Length = 267
Score = 36.8 bits (85), Expect = 0.005
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
+A+ F L L + + PG H PP + V+ F
Sbjct: 32 SASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPP--VDSIGGLTNRLLEVLRPFGDRPLA 89
Query: 64 WLGHSLGGQLG 74
GHS+G +G
Sbjct: 90 LFGHSMGAIIG 100
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 36.5 bits (84), Expect = 0.006
Identities = 16/168 (9%), Positives = 48/168 (28%), Gaps = 22/168 (13%)
Query: 19 YYYVCIDLPGH-GLSS-HFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTH 76
++ D H GLSS + N L + + + SL ++
Sbjct: 63 FHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYE 122
Query: 77 YAAM--------------FPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKL 122
+ +++ + D ++ ++ + L L +++ + +
Sbjct: 123 VISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCF 182
Query: 123 NNRTQPVYTKEQVVSKLKQRLLL------NEISTESAEILFTRAVSAR 164
+ + + V+ L+ + + E + +
Sbjct: 183 EHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGH 230
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 36.8 bits (84), Expect = 0.007
Identities = 39/253 (15%), Positives = 78/253 (30%), Gaps = 84/253 (33%)
Query: 69 LGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLN-NRTQ 127
+ L +Y LM + ++ + + + RD L N + K N +R Q
Sbjct: 83 VEEVLRINY----KFLMSPI---KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135
Query: 128 PVYTKEQVVSKLK--QRLLLNEI-----STESAEILFTRAVSARDGGFVF---------- 170
P Q + +L+ + +L++ + + + ++ + V + +F
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195
Query: 171 ----------------NFDQR---------------------LKNKIY----LVMTEDQQ 189
N+ R LK+K Y LV+ Q
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 190 HSIIR--NIQCQTLCILSQDSFNRVWIVNENYIGTYCLYSRHPKFHVEMVDSGHDMELEE 247
N+ C+ L + ++ ++ H+ + H M L
Sbjct: 256 AKAWNAFNLSCKIL-LTTRFKQVTDFLSAATT------------THISLDH--HSMTLTP 300
Query: 248 PEKLSGLISDFLD 260
E S L+ +LD
Sbjct: 301 DEVKS-LLLKYLD 312
Score = 32.5 bits (73), Expect = 0.17
Identities = 22/161 (13%), Positives = 46/161 (28%), Gaps = 46/161 (28%)
Query: 102 EDTL--TKVRDILTNQMNLEEKLNNRTQPVYTKEQVVSKLKQRLLLNEISTESAEILFTR 159
T + ++ + + VV+KL + L+ + ES +
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDV-----------MVVVNKLHKYSLVEKQPKESTISIP-- 429
Query: 160 AVSARDGGFVFNFDQRLKNKIYLVMTEDQQHSIIRNIQCQTLCILSQDSFNRVWIVNENY 219
+L+N+ L H I + D ++ + Y
Sbjct: 430 -------SIYLELKVKLENEYAL-------HRSIVD-HYNIPKTFDSDDLIPPYL--DQY 472
Query: 220 IGTYCLYSRHPKFHVEMVDSGHDMELEEPEKLSGLISDFLD 260
++ + H +E PE+++ FLD
Sbjct: 473 FYSHIGH--------------HLKNIEHPERMTLFRMVFLD 499
Score = 32.1 bits (72), Expect = 0.21
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 37/161 (22%)
Query: 37 PGMLLDW---LNYLLACHR-VVNHFAWTK----------------FIWLGHSLGGQLGTH 76
P + L+ L A HR +V+H+ K + +GH L
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488
Query: 77 YAAMFPQL-MD-RLILLDAMNQRKTKVEDTLTKVRDILTN---QMNLEEKLNNRTQPVYT 131
+F + +D R + ++K + + T + N Q+ + P Y
Sbjct: 489 RMTLFRMVFLDFRFL------EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY- 541
Query: 132 KEQVVSKLKQRLLLNE---ISTESAEILFTRAVSARDGGFV 169
E++V+ + L E I ++ ++L A+ A D
Sbjct: 542 -ERLVNAILDFLPKIEENLICSKYTDLL-RIALMAEDEAIF 580
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease,
xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP:
c.69.1.7
Length = 313
Score = 35.6 bits (81), Expect = 0.013
Identities = 18/69 (26%), Positives = 26/69 (37%)
Query: 15 LPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLG 74
PA+Y V D G G S+ + + + R+ H ++ G S G L
Sbjct: 57 DPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLA 116
Query: 75 THYAAMFPQ 83
YA PQ
Sbjct: 117 LAYAQTHPQ 125
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 35.4 bits (81), Expect = 0.014
Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 13 PLLPARYYYVCIDLPGHGLSSHFP--PGMLLDW---LNYLLACHRVVNHFAWTKFIWLGH 67
L + +D+P G SS +P LN L + V + + +G
Sbjct: 216 HLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDH----HRVGLIGF 271
Query: 68 SLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVRDILTNQM 116
GG + + + + ++L A L ++ + + +
Sbjct: 272 RFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVL 320
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET:
PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB:
1qtr_A* 1x2b_A* 1x2e_A*
Length = 317
Score = 35.1 bits (80), Expect = 0.018
Identities = 16/76 (21%), Positives = 27/76 (35%)
Query: 15 LPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLG 74
P RY + D G G S + + R+ +++ G S G L
Sbjct: 60 DPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLA 119
Query: 75 THYAAMFPQLMDRLIL 90
YA P+ + ++L
Sbjct: 120 LAYAQTHPERVSEMVL 135
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.4 bits (75), Expect = 0.034
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Query: 132 KEQVVSKLKQRLLLNEISTESAEILFTRAVSA 163
++Q + KL+ L L + +SA L A+ A
Sbjct: 18 EKQALKKLQASLKL--YADDSAPAL---AIKA 44
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 33.6 bits (76), Expect = 0.043
Identities = 17/103 (16%), Positives = 27/103 (26%), Gaps = 13/103 (12%)
Query: 4 NAASFDKLLPLLPAR-YYYVCIDLPGHGLSS---------HFPPGMLLDWLNYLLACHRV 53
+ LLP R + + D P HG + + L + RV
Sbjct: 36 SKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRV 95
Query: 54 VNHFAW---TKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
G SLG + A + L + +
Sbjct: 96 AEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGS 138
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein,
alpha/beta-hydrolases fold, structur genomics; HET: MSE;
1.66A {Pectobacterium atrosepticum SCRI1043}
Length = 191
Score = 32.3 bits (73), Expect = 0.090
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 42 DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKV 101
W+ + V I +GHS G H + + ++L+ + ++
Sbjct: 60 RWVLAIRRELSVCTQ----PVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI 115
Query: 102 EDTLTKVRDI 111
+D +
Sbjct: 116 DDRIQASPLS 125
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the
alpha/beta superfamily, structural genomics; HET: MSE
TLA P6G; 1.35A {Xanthomonas campestris PV}
Length = 176
Score = 32.2 bits (73), Expect = 0.098
Identities = 13/75 (17%), Positives = 21/75 (28%), Gaps = 7/75 (9%)
Query: 19 YYYVCIDLPGHGLSSH-FPPGMLLDWLNYLLACHRVVNHFAWTKFIWL-GHSLGGQLGTH 76
+ + D G + L LL + + L G SLG +
Sbjct: 34 WTHERPDFTDLDARRDLGQLGDVRGRLQRLLE---IARAATEKGPVVLAGSSLGSYIAAQ 90
Query: 77 YAAMFPQLMDRLILL 91
+ P L L+
Sbjct: 91 VSLQVPT--RALFLM 103
Score = 26.4 bits (58), Expect = 8.2
Identities = 6/35 (17%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 226 YSRHPKFHVEMVDSGHDMELEEPEKLSGLISDFLD 260
+++ + +VD GH + S ++ L
Sbjct: 141 WAQARSARLLLVDDGHRLGAHVQA-ASRAFAELLQ 174
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS,
non-ribosomal peptide synthetase, type II thioesterase,
antibiotic biosynthesis; NMR {Bacillus subtilis} PDB:
2ron_A
Length = 242
Score = 32.5 bits (74), Expect = 0.11
Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
+ASF L L + + PGHG + + D + +N F+
Sbjct: 25 YSASFRPLHAFLQGECEMLAAEPPGHGTNQT-SA--IEDLEELTDLYKQELNLRPDRPFV 81
Query: 64 WLGHSLGGQLGTHYAAMFPQLMDRLILL 91
GHS+GG + A + +
Sbjct: 82 LFGHSMGGMITFRLAQKLEREGIFPQAV 109
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 32.0 bits (72), Expect = 0.17
Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 17/89 (19%)
Query: 11 LLPLLPARYYYVCIDLP----GHGLSSHFPPGMLLDW---LNYLLACHRVVNHFAWTKFI 63
L L + +V +++P G G H D + LL H + +
Sbjct: 60 LAEELQGDWAFVQVEVPSGKIGSGPQDH--AHDAEDVDDLIGILLRDHCM------NEVA 111
Query: 64 WLGHSLGGQLGTHYAAMF--PQLMDRLIL 90
S G QL + R+IL
Sbjct: 112 LFATSTGTQLVFELLENSAHKSSITRVIL 140
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A
{Streptomyces coelicolor} PDB: 3qmw_A*
Length = 280
Score = 31.9 bits (72), Expect = 0.19
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 4 NAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFI 63
++F L V + LPG GL P ++ L +A + H +
Sbjct: 63 TVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVA-DALEEHRLTHDYA 121
Query: 64 WLGHSLGGQLG 74
GHS+G L
Sbjct: 122 LFGHSMGALLA 132
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix
bundle, structural genomics protein structure
initiative; HET: PGE; 2.12A {Streptococcus mutans}
Length = 405
Score = 32.0 bits (72), Expect = 0.19
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 13 PLLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFA--WTKFIWLGHSLG 70
Y + +DLPG G + + +D + A +++ + K G S G
Sbjct: 182 SGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAAISA---ILDWYQAPTEKIAIAGFSGG 238
Query: 71 GQLGTHYAAMFPQL 84
G ++
Sbjct: 239 GYFTAQAVEKDKRI 252
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG,
P structure initiative; 1.80A {Listeria innocua}
Length = 254
Score = 31.3 bits (70), Expect = 0.22
Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 7/101 (6%)
Query: 42 DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQL-----MDRLILLDAMNQ 96
WL + + + + +T+ +GHS GG T+YA + + +L+ + +
Sbjct: 78 KWLKIAM--EDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFN 135
Query: 97 RKTKVEDTLTKVRDILTNQMNLEEKLNNRTQPVYTKEQVVS 137
++ + L N + V +V++
Sbjct: 136 DLDPNDNGMDLSFKKLPNSTPQMDYFIKNQTEVSPDLEVLA 176
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A
4ao8_A
Length = 259
Score = 31.0 bits (69), Expect = 0.33
Identities = 16/90 (17%), Positives = 25/90 (27%), Gaps = 27/90 (30%)
Query: 19 YYYVCIDLPGHGLSSHFPPG------------------------MLLDWLNYLLACHRVV 54
+ ID PGHG + G ++ DW L +
Sbjct: 86 ISAMAIDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAAL---DFIE 142
Query: 55 NHFAWTKFIWLGHSLGGQLGTHYAAMFPQL 84
W G S+G +G A ++
Sbjct: 143 AEEGPRPTGWWGLSMGTMMGLPVTASDKRI 172
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2
function project, S2F, structural genomics, transferase;
HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Length = 206
Score = 30.2 bits (69), Expect = 0.45
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 19/79 (24%)
Query: 83 QLMDRLILLDAMNQRKTKVE-----DTLTK--VRDILTNQMNLEEKL-------NNRTQP 128
L DR++++D +T++ D ++ I+ +Q++ +E+L NN +
Sbjct: 122 ALCDRILVVDV--SPQTQLARSAQRDNNNFEQIQRIMNSQVSQQERLKWADDVINNDAEL 179
Query: 129 VYTKEQV---VSKLKQRLL 144
+ V +L Q L
Sbjct: 180 AQNLPHLQQKVLELHQFYL 198
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein
structure initiative, MCSG, midwest center for
structural genomics; 1.8A {Bacillus subtilis} SCOP:
c.69.1.31
Length = 192
Score = 29.0 bits (64), Expect = 1.2
Identities = 12/70 (17%), Positives = 20/70 (28%), Gaps = 10/70 (14%)
Query: 14 LLPARYYYVCIDLPGHGLSSHFPPGMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQL 73
LL +++P L DWL+ L ++ + HSLG
Sbjct: 29 LLADGVQADILNMPNPLQPR------LEDWLDTLSLYQHTLHENT----YLVAHSLGCPA 78
Query: 74 GTHYAAMFPQ 83
+
Sbjct: 79 ILRFLEHLQL 88
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway,
coenzyme A, structure-functi studies, alpha-beta
hydrolase fold; 1.65A {Haemophilus influenzae} SCOP:
c.69.1.40
Length = 377
Score = 29.2 bits (66), Expect = 1.3
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 33 SHFPPGMLLDWLNYLLACHRVVNHFAWTK-FIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91
S FP ++ D + ++ H + +G S GG +A +P MD ++ L
Sbjct: 129 SQFPNIVVQDIVK---VQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNL 185
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation,
pancreas, glycoprotein, chimeric; 2.01A {Cavia
porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B*
1n8s_A
Length = 432
Score = 28.4 bits (63), Expect = 2.3
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
+GHSLG L+ R+ LD
Sbjct: 145 PENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDP 179
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3;
1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A*
1viy_A 1t3h_A 1n3b_A
Length = 218
Score = 28.3 bits (64), Expect = 2.4
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 16/77 (20%)
Query: 83 QLMDRLILLDAMNQRKTKVE-----DTLTK--VRDILTNQMNLEEKL-------NNRTQP 128
+ +R++++D +T+++ D +T+ V IL Q E +L +N P
Sbjct: 124 KKANRVLVVDV--SPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAP 181
Query: 129 VYTKEQVVSKLKQRLLL 145
V L L
Sbjct: 182 DAIASDVARLHAHYLQL 198
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase,
enantioselectivity, directed evolution variant; HET:
FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Length = 495
Score = 28.4 bits (63), Expect = 2.5
Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 18/55 (32%)
Query: 33 SHFPPGMLLDWLNYLLA-CHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMD 86
PGM+ + L L V FA + +A + +D
Sbjct: 431 FFSRPGMVSECLQGLREKHGGV--VFA---------------NSDWALGWRSFID 468
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids
binding, glycosylation, extracellular, hydrolase; HET:
NAG; 1.70A {Yarrowia lipolytica}
Length = 301
Score = 28.1 bits (62), Expect = 2.7
Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 6/51 (11%)
Query: 40 LLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLIL 90
+ L+ ++ + + GHSLGG + ++
Sbjct: 140 IGPKLDSVIEQY------PDYQIAVTGHSLGGAAALLFGINLKVNGHDPLV 184
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa
transferase; 2.20A {Leptospira interrogans} SCOP:
c.69.1.40
Length = 366
Score = 28.4 bits (64), Expect = 2.8
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 33 SHFPPGMLLDWLNYLLACHRVVNHFAWTK-FIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91
S FP + D + A +V K F G S+GG ++ +P + I++
Sbjct: 120 SRFPFVSIQDMVK---AQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVM 176
Score = 27.2 bits (61), Expect = 6.4
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 238 DSGHDMELEEPEKLSGLISDFLD 260
GHD L + K ++ FL+
Sbjct: 341 GEGHDSFLLKNPKQIEILKGFLE 363
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates,
flavoenzymes, nicotine degradation, oxidoreductase; HET:
FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB:
3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X*
3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Length = 431
Score = 27.9 bits (62), Expect = 3.4
Identities = 8/55 (14%), Positives = 13/55 (23%), Gaps = 18/55 (32%)
Query: 33 SHFPPGMLLDWLNYLLACH-RVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMD 86
G L R+ HF G+ + FP ++
Sbjct: 372 VAPRVGQFSRVHKELGEPAGRI--HFV---------------GSDVSLEFPGYIE 409
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B-
hydrolase fold, acyltransferase, acetyl coenzyme A,
antibiotic biosynthesis; HET: COA; 2.2A {Acremonium
chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Length = 444
Score = 27.7 bits (62), Expect = 4.1
Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 33 SHFPPGMLLDWLNYLLACHRVVNHFAWTK-FIWLGHSLGGQLGTHYAAMFPQLMDRLILL 91
+ FP + D + +V++ + +G S+GG +A P+ + +++ +
Sbjct: 175 AKFPRTTIRDDVR---IHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPI 231
Score = 27.0 bits (60), Expect = 7.6
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 233 HVEMVDS--GHDMELEEPEKLSGLISDFLD 260
+ +VD+ GHD + E +K++ + FLD
Sbjct: 411 RLCVVDTNEGHDFFVMEADKVNDAVRGFLD 440
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation;
HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2
c.69.1.19 PDB: 2ppl_A
Length = 450
Score = 27.7 bits (61), Expect = 4.5
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDA 93
++ +GHSLG + A + R+ LD
Sbjct: 145 PSQVQLIGHSLGAHV-AGEAGSRTPGLGRITGLDP 178
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural
genomics, joint CE structural genomics, JCSG, protein
structure initiative; 1.75A {Mesorhizobium loti} SCOP:
c.69.1.14
Length = 223
Score = 27.2 bits (60), Expect = 4.7
Identities = 15/120 (12%), Positives = 26/120 (21%), Gaps = 13/120 (10%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLP-----GHGLSSHFPPGML--------LDWLNYLLA 49
+ + L + V G P
Sbjct: 41 VDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTN 100
Query: 50 CHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVEDTLTKVR 109
+ +LG+S G L + + P ++ LL M L +R
Sbjct: 101 EAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVPATDLAGIR 160
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker
complexed with non-BRCT protein, three-helix bundle,
parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4
c.15.1.4 PDB: 1gzh_B
Length = 259
Score = 27.1 bits (59), Expect = 5.2
Identities = 15/120 (12%), Positives = 36/120 (30%), Gaps = 13/120 (10%)
Query: 38 GMLLDWLNYLLACHRVVNHFAWTKFIWLGHSLGGQ---LGTHYAAMFPQLMDRLIL---- 90
L ++ NYLL + + + L + F +L +++
Sbjct: 125 NQLQNYRNYLLPAGYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGA 184
Query: 91 --LDAMNQRKTKVEDTLTKVRDILTNQMNLEEKLNNRTQ---PVYTKEQVV-SKLKQRLL 144
+ + + L ++T+ L PV ++E V+ + +
Sbjct: 185 ASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERI 244
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849,
bifunctional coenzyme A synthase (COA synthase), S
genomics; HET: ACO UNL; 1.70A {Mus musculus}
Length = 281
Score = 27.2 bits (61), Expect = 5.8
Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 19/78 (24%)
Query: 83 QLMDRLILLDAMNQRKTKVE-----DTLTK--VRDILTNQMNLEEKL-------NNRTQP 128
++ + + V D L++ + L +QM+ ++ + + +
Sbjct: 198 SMVHEVWTVVI--PETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWES 255
Query: 129 VYTKEQV---VSKLKQRL 143
T+ QV + L++RL
Sbjct: 256 HVTQSQVEKAWNLLQKRL 273
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET:
DDQ; 2.99A {Equus caballus}
Length = 452
Score = 27.3 bits (60), Expect = 5.9
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 59 WTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLD 92
+GHSLG + R+ LD
Sbjct: 145 PENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLD 178
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450
fold, carrier protein, 4-helix bundle, cytoplasm; HET:
ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1
PDB: 3ejd_A* 3eje_A*
Length = 97
Score = 25.8 bits (57), Expect = 6.2
Identities = 4/27 (14%), Positives = 14/27 (51%)
Query: 94 MNQRKTKVEDTLTKVRDILTNQMNLEE 120
+ R + + +V+ I+ Q+ +++
Sbjct: 13 LVPRGSHMSTIEERVKKIIGEQLGVKQ 39
>2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP}
Length = 346
Score = 27.1 bits (59), Expect = 6.6
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 8/43 (18%)
Query: 40 LLDWLNYLLACHRVVNHFAWTKFIWL-GHSLGGQLGTHYAAMF 81
+L +LN + I + GHS GG L + A
Sbjct: 152 ILQFLNEKIGPEGKAK-------ICVTGHSKGGALSSTLALWL 187
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct
initiative, midwest center for structural genomics,
MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP:
c.69.1.14
Length = 226
Score = 26.3 bits (58), Expect = 8.5
Identities = 13/126 (10%), Positives = 30/126 (23%), Gaps = 25/126 (19%)
Query: 3 DNAASFDKLLPLLPARYYYVCIDLPGHGLSSHFPPGM----------LLDWLNYLLACHR 52
N L ++ + + + GM + D + +
Sbjct: 49 GNELDLLPLAEIVDSEASVLSVRGN------VLENGMPRFFRRLAEGIFDEEDLIFRTKE 102
Query: 53 VVN---------HFAWTKFIWLGHSLGGQLGTHYAAMFPQLMDRLILLDAMNQRKTKVED 103
+ F + +G+S G + + + +L M R+
Sbjct: 103 LNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQLA 162
Query: 104 TLTKVR 109
L
Sbjct: 163 NLAGKS 168
>3n8b_A Uncharacterized protein; PUR-alpha, PUR repeat, PUR domain, whirly
fold, RNA binding, binding, nucleic acid binding
protein; HET: MSE; 1.90A {Borrelia burgdorferi}
Length = 98
Score = 25.6 bits (56), Expect = 8.8
Identities = 6/36 (16%), Positives = 14/36 (38%)
Query: 151 ESAEILFTRAVSARDGGFVFNFDQRLKNKIYLVMTE 186
E E+ + + + + N + K +L + E
Sbjct: 1 ERGEVYSEKMFTESERTYFMNVKENRKGDYFLNIVE 36
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A
{Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Length = 269
Score = 26.4 bits (58), Expect = 9.1
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 63 IWL-GHSLGGQLGTHYAAMFPQLMDRL 88
+ + GHSLGG Q RL
Sbjct: 139 VIVTGHSLGGAQALLAGMDLYQREPRL 165
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein
structure in midwest center for structural genomics,
MCSG; 2.01A {Staphylococcus epidermidis}
Length = 249
Score = 26.3 bits (57), Expect = 9.4
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 42 DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQ 83
W+ +L+ + F+ GHS+G Y +
Sbjct: 81 YWIKEVLSQLKSQFGIQQFNFV--GHSMGNMSFAFYMKNYGD 120
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG,
protein structure initiative, midwest center FO
structural genomics; 2.00A {Lactobacillus plantarum}
Length = 250
Score = 26.2 bits (57), Expect = 9.6
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 42 DWLNYLLACHRVVNHFAWTKFIWLGHSLGGQLGTHYAAMFPQL-----MDRLILL 91
WLN A +V + + F LGHS GG + T + + + +DRL+ +
Sbjct: 82 VWLNT--AFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTI 134
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.138 0.421
Gapped
Lambda K H
0.267 0.0518 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,931,354
Number of extensions: 223485
Number of successful extensions: 751
Number of sequences better than 10.0: 1
Number of HSP's gapped: 661
Number of HSP's successfully gapped: 179
Length of query: 260
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 168
Effective length of database: 4,133,061
Effective search space: 694354248
Effective search space used: 694354248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (25.8 bits)