RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16158
(136 letters)
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 135 bits (341), Expect = 2e-40
Identities = 56/133 (42%), Positives = 85/133 (63%), Gaps = 3/133 (2%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNA--PFGQQA 62
+++ + RFHQLD+ + SI L D ++ ++GGLD+LVNNAGI ++ PF QA
Sbjct: 47 QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQA 106
Query: 63 ETTLATNFFALVTVCHMLFPLLRPHARVVNVASQFGML-YKVPSQELKQTLLNDSLTEDQ 121
E T+ TNFF VC L PL++P RVVNV+S + K S EL+Q ++++TE++
Sbjct: 107 EVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEE 166
Query: 122 LVGMMHDYVKLAK 134
LVG+M+ +V+ K
Sbjct: 167 LVGLMNKFVEDTK 179
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 96.2 bits (239), Expect = 4e-25
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 36/161 (22%)
Query: 10 NNDNVRFHQLDVLNET-SIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG--------- 59
N++NV FHQLDV + ++ L D I+T G LDILVNNAG+
Sbjct: 60 NHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIG 119
Query: 60 -----------------------QQAETTLATNFFALVTVCHMLFPLLR--PHARVVNVA 94
+ AE L N+ + +V +L PLL+ R+VNV+
Sbjct: 120 EDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVS 179
Query: 95 SQFGMLYKVPSQELKQTLLN-DSLTEDQLVGMMHDYVKLAK 134
S G L V ++ + L + D+LTE+++ +++ +K K
Sbjct: 180 SSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFK 220
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 75.4 bits (186), Expect = 1e-17
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 8/103 (7%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQ--- 60
K V +D N I+ ++ + G + ILVNNAG++Y
Sbjct: 72 AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS--DLFATQD 129
Query: 61 -QAETTLATNFFALVTVCHMLFPLL--RPHARVVNVASQFGML 100
Q E T N A P + H +V VAS G +
Sbjct: 130 PQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 73.5 bits (181), Expect = 5e-17
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 18/106 (16%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHG--GLDILVNNAGIIYRGNAPF---GQQAETT 65
+ V L V + S+ + G GL +L+NNAG++
Sbjct: 50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQ 109
Query: 66 LATNFFALVTVCHMLFPLLR-------------PHARVVNVASQFG 98
L N ++V + L PLL+ A V+ ++S G
Sbjct: 110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 70.3 bits (173), Expect = 6e-16
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 7/92 (7%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQ----QAETTLA 67
+ V D+ + + G +++++ AG G P G Q +
Sbjct: 49 NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFG--PVGVYTAEQIRRVME 106
Query: 68 TNFFALVTVCHMLFPLLRPHA-RVVNVASQFG 98
+N + + V L+ + NV S
Sbjct: 107 SNLVSTILVAQQTVRLIGERGGVLANVLSSAA 138
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 70.0 bits (172), Expect = 9e-16
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Query: 10 NNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAET---TL 66
N + + E I + + I ++ +D V AG GNA + ++ +
Sbjct: 57 NPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMI 116
Query: 67 ATNFFALVTVCHMLFPLLRPHARVVNVASQFGM 99
N ++ H+ LL V + +
Sbjct: 117 DMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL 149
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 69.7 bits (171), Expect = 2e-15
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHG--GLDILVNNAGIIYRGNAPFGQQA 62
+ + KN+ N+ ++D+ N + KL DI+ GL++L NNAGI + ++
Sbjct: 65 EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRS 124
Query: 63 ET---TLATNFFALVTVCHMLFPLLR-------------PHARVVNVASQFG 98
+ TL TN + + PLL+ A ++N++S G
Sbjct: 125 QELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 69.8 bits (171), Expect = 3e-15
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPF----GQQAET 64
N+ ++R +LDV ++ S+ + D I + G +D+L++NAG + G P +Q
Sbjct: 56 DNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFG--PAEAFTPEQFAE 113
Query: 65 TLATNFFALVTVCHMLFPLLRP--HARVVNVASQFGMLYKVP 104
N + V P +R H ++ ++S P
Sbjct: 114 LYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP 155
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 67.2 bits (165), Expect = 1e-14
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
L+ +L ++ + G LD L++NA II P Q + + N A
Sbjct: 72 NLENATAQQYRELAARVEHEFGRLDGLLHNASII-GPRTPLEQLPDEDFMQVMHVNVNAT 130
Query: 74 VTVCHMLFPLLR--PHARVVNVASQFG 98
+ L PLL+ A + +S G
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVG 157
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 67.2 bits (165), Expect = 1e-14
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
V + D+ + I L G +D+L NAG+ PF Q +E A
Sbjct: 54 PRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVS--ELEPFDQVSEASYDRQFA 111
Query: 68 TNFFALVTVCHMLFPLLRPHARVVNVAS 95
N L PL+R +V +S
Sbjct: 112 VNTKGAFFTVQRLTPLIREGGSIVFTSS 139
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 67.2 bits (165), Expect = 1e-14
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
Q D N + +L++ ++ + G +D+L NAG P G+ E T
Sbjct: 75 GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGG--SMLPLGEVTEEQYDDTFD 132
Query: 68 TNFFALVTVCHMLFPLLRPHARVVNVASQFG 98
N ++ PLL + VV S G
Sbjct: 133 RNVKGVLFTVQKALPLLARGSSVVLTGSTAG 163
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 66.9 bits (164), Expect = 2e-14
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPF----GQQAET 64
D LDV + I + D+ ++G +D+LVNNAG G F ++
Sbjct: 48 AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERELRD 105
Query: 65 TLATNFFALVTVCHMLFPLLRP--HARVVNVASQFG 98
+ F + L P +R VVN++S G
Sbjct: 106 LFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG 141
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 65.7 bits (161), Expect = 5e-14
Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG--QQAETTLATNF 70
+ + + + T + GGLD+L+ N N ++ NF
Sbjct: 79 SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNF 138
Query: 71 FALVTVCHMLFPLL-RPHARVVNVASQFG 98
+ V + P+L + + +V V+S G
Sbjct: 139 LSYVVLTVAALPMLKQSNGSIVVVSSLAG 167
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 63.8 bits (156), Expect = 2e-13
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 5/97 (5%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE 63
K + + DV + + + + G +DILVNNAG Q
Sbjct: 70 ILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPV 129
Query: 64 ----TTLATNFFALVTVCHMLFP-LLRPHARVVNVAS 95
T NF A++ + L++ +VNV+S
Sbjct: 130 ELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSS 166
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 64.0 bits (156), Expect = 3e-13
Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 20/102 (19%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLAT----- 68
V QLDV + D+++ + G + IL NNAG+ F E++
Sbjct: 61 VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV-----NLFQPIEESSYDDWDWLL 115
Query: 69 --NFFALVTVCHMLFPLLRPHAR--------VVNVASQFGML 100
N +V P + + VVN AS L
Sbjct: 116 GVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL 157
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 64.0 bits (156), Expect = 3e-13
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 8/96 (8%)
Query: 10 NNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRG---NAPFGQQAETTL 66
++ QLDV + S+ + + G +D+LV NAG+ G + L
Sbjct: 55 PPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGE-DAVASVL 111
Query: 67 ATNFFALVTVCHMLFPLLRP--HARVVNVASQFGML 100
N V + P ++ RV+ S G++
Sbjct: 112 DVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM 147
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 63.5 bits (155), Expect = 4e-13
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQA----ETTLAT 68
+ DV + + +L D+ GG+D++ +NAGI+ G P Q +
Sbjct: 81 DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAG--PLAQMNHDDWRWVIDI 138
Query: 69 NFFALVTVCHMLFPLLRPH---ARVVNVASQFGML 100
+ + + P L + AS G++
Sbjct: 139 DLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV 173
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 61.9 bits (151), Expect = 6e-13
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 10/86 (11%)
Query: 17 HQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQ----QAETTLATNFFA 72
+D+ N SI K+++ + G +D +V+ G P + + T+++
Sbjct: 39 VTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFS--PLTELTPEKNAVTISSKLGG 92
Query: 73 LVTVCHMLFPLLRPHARVVNVASQFG 98
+ + + L
Sbjct: 93 QINLVLLGIDSLNDKGSFTLTTGIMM 118
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 62.1 bits (152), Expect = 7e-13
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
L + +L I + LD +++NAG++ P +Q + N A
Sbjct: 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL-GDVCPMSEQNPQVWQDVMQVNVNAT 128
Query: 74 VTVCHMLFPLLR--PHARVVNVASQFG 98
+ L PLL +V +S G
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVG 155
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 61.9 bits (151), Expect = 1e-12
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG----QQAET 64
K D + D+ ++ + +L + HG +D LV NAG++ +
Sbjct: 47 KYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVL-EPVQNVNEIDVNAWKK 105
Query: 65 TLATNFFALVTVCHMLFPLLR-PHARVVNVAS 95
NFF++V++ + P L+ + VV V+S
Sbjct: 106 LYDINFFSIVSLVGIALPELKKTNGNVVFVSS 137
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 60.6 bits (148), Expect = 2e-12
Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 14/90 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQ----QAETTLATN 69
R D+ +E L + + G LD+LV+ G R + E LA +
Sbjct: 44 ARALPADLADELEAKALLE----EAGPLDLLVHAVGKAGRA--SVREAGRDLVEEMLAAH 97
Query: 70 FFALVTVC-HMLFPLLRPHARVVNVASQFG 98
V H F + AR V +
Sbjct: 98 LLTAAFVLKHARF---QKGARAVFFGAYPR 124
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 60.7 bits (148), Expect = 4e-12
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQA---ETTLA 67
V +LD+ + +S+ + D + G D+L+NNAGI+ P+ E+ +
Sbjct: 61 AGQVEVRELDLQDLSSVRRFADGVS----GADVLINNAGIM---AVPYALTVDGFESQIG 113
Query: 68 TNF---FALVTVCHMLFPLLRPHARVVNVAS 95
TN FAL ++L P L RVV V+S
Sbjct: 114 TNHLGHFALT---NLLLPRLT--DRVVTVSS 139
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 60.2 bits (147), Expect = 4e-12
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTL 66
+N++F + D+ + I + D ++ D + NAGI+ +G L
Sbjct: 43 AENLKFIKADLTKQQDITNVLD--IIKNVSFDGIFLNAGILIKG--SIFDIDIESIKKVL 98
Query: 67 ATNFFALVTVCHMLFPLLRPHARVVNVASQFGM 99
N ++ + L L+ A +V S
Sbjct: 99 DLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF 131
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 60.3 bits (147), Expect = 4e-12
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRG--NAPFGQQ 61
+ NV DV + ++ + G LDILVNNAG + Q
Sbjct: 50 ILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQ 109
Query: 62 AE----TTLATNFFALVTVCHMLFPLLRPHA-RVVNVAS 95
+ TL N +++ + P L +VN++S
Sbjct: 110 SIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISS 148
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 59.6 bits (145), Expect = 5e-12
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 37 QHGGLDILVNNAGIIYRGNAP---FGQQAETTLATNFFALVTVCHMLFPLLRPHARVVNV 93
Q +D + AG G+A F + A+ + + ++ + L+P +
Sbjct: 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 128
Query: 94 ASQFGM 99
+ M
Sbjct: 129 GAAAAM 134
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 59.8 bits (146), Expect = 6e-12
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLAT 68
D ++F Q D +E KL D + G + LVNNAGI A ETT A
Sbjct: 51 GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-----AVNKSVEETTTA- 104
Query: 69 NFFALVTV--------CHMLFPLLRPH---ARVVNVASQFGM 99
+ L+ V + ++ A ++N++S G
Sbjct: 105 EWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF 146
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 59.6 bits (145), Expect = 7e-12
Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 7/87 (8%)
Query: 32 DDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFFALVTVCHMLFPLLRP--HAR 89
D + G+D LV AG+ P + ++ N+F + P L+
Sbjct: 54 DVLAKCSKGMDGLVLCAGL-----GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPA 108
Query: 90 VVNVASQFGMLYKVPSQELKQTLLNDS 116
V ++S L L
Sbjct: 109 AVVISSVASAHLAFDKNPLALALEAGE 135
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 59.5 bits (145), Expect = 8e-12
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
D+ +E +L + LDILVNNAG + A + N ++
Sbjct: 83 PADLSSEAGARRLAQALGELSARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSV 140
Query: 74 VTVCHMLFPLLRPHA------RVVNVAS 95
+ L PLLR A RV+N+ S
Sbjct: 141 FSCIQQLLPLLRRSASAENPARVINIGS 168
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 59.5 bits (145), Expect = 9e-12
Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 11/102 (10%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLAT 68
V +DV + + + +++ GG DILVNNAG + A+
Sbjct: 58 RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE--TIMEAADEKWQFYWEL 115
Query: 69 NFFALVTVCHMLFPLLRP--HARVVNVASQFGMLYKVPSQEL 108
A V + L P +R +++ AS P
Sbjct: 116 LVMAAVRLARGLVPGMRARGGGAIIHNASICA---VQPLWYE 154
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 59.5 bits (145), Expect = 9e-12
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFF 71
D+ ++ + L D+ +G +D+++NNA + PF + F
Sbjct: 64 SVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVF 122
Query: 72 ALVTVCHMLFPLLRPHA-RVVNVASQFG 98
+ + P L VVNV S
Sbjct: 123 GALRLIQGFTPALEESKGAVVNVNSMVV 150
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE---TTLATNFFALV 74
D ET I D ++TQ L +V+NA G++A+ + + A
Sbjct: 77 YGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAE--TPGEEADNFTRMFSVHMLAPY 134
Query: 75 TVCHMLFPLLRPHA--RVVNVASQFG 98
+ PLL +V+++
Sbjct: 135 LINLHCEPLLTASEVADIVHISDDVT 160
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 58.7 bits (143), Expect = 1e-11
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+ DVL+ + + + G ILVNNAG F + + L
Sbjct: 61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS--TFAETTDEAWSEELQLK 118
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVAS 95
FF+++ P L R A +V V S
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNS 146
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 58.5 bits (142), Expect = 2e-11
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Query: 37 QHGGLDILVNNAGIIYRGNAPFGQQAET---TLATNFFALVTVCHMLFPLLRPHARVVNV 93
+D ++ AG GNA + + + H+ L+ +
Sbjct: 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLA 132
Query: 94 ASQFGM 99
++ +
Sbjct: 133 GAKAAL 138
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 58.4 bits (142), Expect = 2e-11
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 9 KNNDNVRFH--QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE--T 64
+ D+ NE I + I++QH G+DI +NNAG+ G +
Sbjct: 78 SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKD 137
Query: 65 TLATNFFALVTVCHMLFPLLR----PHARVVNVAS 95
N AL + ++ ++N+ S
Sbjct: 138 MFNVNVLALSICTREAYQSMKERNVDDGHIININS 172
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 58.4 bits (142), Expect = 2e-11
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 12/96 (12%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT-------LATNF 70
Q D+ + + L D + GGLD +++N+G+ + + E T N
Sbjct: 77 QADISKPSEVVALFDKAVSHFGGLDFVMSNSGM-----EVWCDELEVTQELFDKVFNLNT 131
Query: 71 FALVTVCHMLFPLLRPHARVVNVASQFGMLYKVPSQ 106
V R R++ +S ++ +P+
Sbjct: 132 RGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH 167
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 57.6 bits (140), Expect = 3e-11
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQA----ETTL 66
DN+ QLDV N +I ++ + + +DILVNNAG+ G P + + ET +
Sbjct: 45 GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLA-LGMEPAHKASVEDWETMI 103
Query: 67 ATNFFALVTVCHMLFPLL--RPHARVVNVAS 95
TN LV + + P + R H ++N+ S
Sbjct: 104 DTNNKGLVYMTRAVLPGMVERNHGHIINIGS 134
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 58.0 bits (141), Expect = 3e-11
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 12/96 (12%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT-------LATNF 70
+ D+ I KL D G LDI V+N+G+ FG + T + N
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-----VSFGHLKDVTEEEFDRVFSLNT 128
Query: 71 FALVTVCHMLFPLLRPHARVVNVASQFGMLYKVPSQ 106
V + L R+V +S + VP
Sbjct: 129 RGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKH 164
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 57.5 bits (140), Expect = 4e-11
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE 63
+ + + DV +E +I + + +DIL+NNAGI YR P +
Sbjct: 50 VDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR--KPMVELEL 107
Query: 64 ----TTLATNFFALVTVCHMLFPLLRPHA---RVVNVASQFGML 100
+ TN + V + +++N+ S
Sbjct: 108 ENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA 151
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 57.2 bits (139), Expect = 5e-11
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
+ D+ N + + G + LV+ AG + + E L N +L
Sbjct: 64 KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARK-TIAEMDEAFWHQVLDVNLTSL 122
Query: 74 VTVCHMLFPLLRPHARVVNVASQFGML 100
P + +V +SQ G
Sbjct: 123 FLTAKTALPKMAKGGAIVTFSSQAGRD 149
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 57.4 bits (139), Expect = 5e-11
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 17/98 (17%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHG----GLDILVNNAGIIYRGNAPFGQQAETTLA- 67
V D+ E + +L ++ +L+NNA + G+ G LA
Sbjct: 61 KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATL--GDVSKGFLNVNDLAE 118
Query: 68 ------TNFFALVTVCHMLFPLLR----PHARVVNVAS 95
N +++ + + VVN++S
Sbjct: 119 VNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS 156
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 57.2 bits (139), Expect = 5e-11
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGG-LDILVNNAGIIYRGNAPFGQQAETT------ 65
NV D+L+ T KL + G L+ILVNNAG++ A + T
Sbjct: 71 NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA-----KDFTEKDYNI 125
Query: 66 -LATNFFALVTVCHMLFPLLRP--HARVVNVASQFGML 100
+ TNF A + + +PLL+ + V+ ++S G
Sbjct: 126 IMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS 163
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 57.2 bits (139), Expect = 6e-11
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE- 63
++ LDV + S+ G +D+LVNNAG++ + E
Sbjct: 46 TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEW 105
Query: 64 -TTLATNFFALVTVCHMLFPLL--RPHARVVNVAS 95
+ N ++ + P++ + +++N+ S
Sbjct: 106 ERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGS 140
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 56.7 bits (138), Expect = 8e-11
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFF 71
+ F + DV +E + +Q + G L++LVNNAGI G L F
Sbjct: 52 ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI-----LLPGDMETGRLED-FS 105
Query: 72 ALVTV--------CHMLFPLLRPH-ARVVNVASQFGM 99
L+ + C ++ ++N+AS
Sbjct: 106 RLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW 142
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 56.8 bits (138), Expect = 9e-11
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V +D+ + +L GGLD+LVNNAGI + P T+A N
Sbjct: 72 VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVN 129
Query: 70 FFALVTVCHMLFPLLRPHA---RVVNVASQFGML 100
A + + + ++ VAS +
Sbjct: 130 LRAPALLASAVGKAMVAAGEGGAIITVASAAALA 163
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 56.8 bits (138), Expect = 9e-11
Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 6/94 (6%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
H +D+ NE S+ L D G LDI+ NNA + Q T
Sbjct: 57 RGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116
Query: 68 TNFFALVTVCHMLFPLLRPHAR--VVNVASQFGM 99
N + +C P L +VN++S
Sbjct: 117 VNARGTMLMCKYAIPRLISAGGGAIVNISSATAH 150
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 56.8 bits (138), Expect = 9e-11
Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
+ D + +I + + GGLDILVN+AGI + P + +A NF A
Sbjct: 87 RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA--PLEETTVADFDEVMAVNFRAP 144
Query: 74 VTVCHMLFPLLRPHARVVNVASQFGMLYKVPSQ 106
L R++ + S L P
Sbjct: 145 FVAIRSASRHLGDGGRIITIGSNLAELVPWPGI 177
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 56.5 bits (137), Expect = 1e-10
Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 12/96 (12%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT-------LATNF 70
+ +V I ++ ++ G LDI+ +N+G+ FG + T N
Sbjct: 85 KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-----VSFGHVKDVTPEEFDRVFTINT 139
Query: 71 FALVTVCHMLFPLLRPHARVVNVASQFGMLYKVPSQ 106
V + L R++ + S G VP
Sbjct: 140 RGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKH 175
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 56.4 bits (137), Expect = 1e-10
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 11/101 (10%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE 63
K + V DV E ++ + Q G +D+LVNNAG FG
Sbjct: 50 ILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD--AFGTTGT 107
Query: 64 --------TTLATNFFALVTVCHMLFP-LLRPHARVVNVAS 95
TL N A++ + + P L+ +VNV+S
Sbjct: 108 DQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSS 148
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 56.4 bits (137), Expect = 1e-10
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+ DV N + KL + ++ + G LD +VN AGI R P + + N
Sbjct: 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVN 130
Query: 70 FFALVTVC-----HMLFPLLRPHARVVNVAS 95
F VC + + ++N+ S
Sbjct: 131 LFGTYYVCREAFSLL---RESDNPSIINIGS 158
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 56.0 bits (136), Expect = 1e-10
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE--TTL 66
+ V +H LDV S+ + + + G +D++V NAG+ Y + E +
Sbjct: 49 EQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMI 108
Query: 67 ATNFFALVTVCHMLFPLLRPHAR--VVNVAS 95
N + L+ +V +
Sbjct: 109 EVNLLGVWRTLKAFLDSLKRTGGLALVTTSD 139
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 56.0 bits (136), Expect = 1e-10
Identities = 22/88 (25%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE--TTLATN 69
+ DV E + ++ G L LVNNAG+ E L TN
Sbjct: 50 EGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTN 109
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVAS 95
P L R +VNV S
Sbjct: 110 LTGAFLGIRHAVPALLRRGGGTIVNVGS 137
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 56.0 bits (136), Expect = 2e-10
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 15/98 (15%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQ-HGGLDILVNNAGIIYRGNAPFGQQAETT------ 65
V D+ + + +L + + HG L+ILVNNAGI+ A + T
Sbjct: 59 KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEA-----KDYTVEDYSL 113
Query: 66 -LATNFFALVTVCHMLFPLLRP--HARVVNVASQFGML 100
++ NF A + + P L+ VV ++S G L
Sbjct: 114 IMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 151
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 56.0 bits (136), Expect = 2e-10
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFF 71
D R+ LDV D T GGL +LVNNAGI+ G + L +
Sbjct: 53 DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI-----EDYALT-EWQ 106
Query: 72 ALVTV--------CHMLFPLLRPHAR--VVNVASQFGM 99
++ V + ++ R ++N++S G+
Sbjct: 107 RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL 144
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 55.6 bits (135), Expect = 2e-10
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
D+ + + +++ +D+LVNNAGII R AP + + L N
Sbjct: 81 AEAVVADLADLEGAANVAEELA-ATRRVDVLVNNAGIIAR--APAEEVSLGRWREVLTVN 137
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVASQFGML 100
A + + R+V +AS
Sbjct: 138 LDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ 170
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 55.4 bits (134), Expect = 3e-10
Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 8/95 (8%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
D+ + ++ Q GG+DI VNNA I G +
Sbjct: 71 VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLG--SIEEVPLKRFDLMNGIQVRGT 128
Query: 74 VTVCHMLFPLLR--PHARVVNVASQFGMLYKVPSQ 106
V P ++ + ++ ++ + K
Sbjct: 129 YAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRP 163
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 55.6 bits (135), Expect = 3e-10
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+R+ D+ NE + D + HG L +V+ AG P Q T+ N
Sbjct: 65 IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS-ENIGPITQVDSEAWRRTVDLN 123
Query: 70 FFALVTVCHMLFPLLRPHA--RVVNVASQFGML 100
+ V + V ++S
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAASN 156
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 55.2 bits (134), Expect = 3e-10
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFF 71
D R+ LDV E ++ + + G +D LVNNAGI + ++ F
Sbjct: 51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI-----STGMFLETESVE-RFR 104
Query: 72 ALVTV--------CHMLFPLLRPH--ARVVNVASQFGM 99
+V + + P ++ +VN++S G+
Sbjct: 105 KVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 55.3 bits (134), Expect = 3e-10
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT-------LAT 68
D+ L + G LDI+VNNAG+I RG ETT L
Sbjct: 70 HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRI-----TETTDADWSLSLGV 124
Query: 69 NFFALVTVCHMLFPLLRP--HARVVNVASQFGM 99
N A +C PL+ +VNVAS +G+
Sbjct: 125 NVEAPFRICRAAIPLMAAAGGGAIVNVASCWGL 157
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 55.2 bits (134), Expect = 3e-10
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE- 63
++ V +LDV + + GGLDILVNNAGI+ G +
Sbjct: 49 DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDW 108
Query: 64 -TTLATNFFALVTVCHMLFP-LLRPHARVVNVAS 95
+ TN L+ + P LLR VV ++S
Sbjct: 109 TRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSS 142
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 54.9 bits (133), Expect = 3e-10
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 12/96 (12%)
Query: 18 QLDVLNETSIHKLHDDIQT-QHGGLDILVNNAGIIYRG-----NAPFGQQAE----TTLA 67
D E+ + L + + Q G LD+LVNNA + N F +
Sbjct: 60 VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119
Query: 68 TNFFALVTVCHMLFPLL--RPHARVVNVASQFGMLY 101
L+ +V ++S + Y
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY 155
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 54.9 bits (133), Expect = 3e-10
Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE--TTLATNF 70
V + D++ E D ++ +D LV+ A + G AE L N
Sbjct: 49 GVEPIESDIVKEVLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNV 107
Query: 71 FALVTVCHMLFPLLRP-HARVVNVAS 95
+ L P LR V+ + S
Sbjct: 108 IVPAELSRQLLPALRAASGCVIYINS 133
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 55.2 bits (133), Expect = 4e-10
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
+DV +E I + + GG+DILVNNA I + N
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT--NTLDTPTKRLDLMMNVNTRGT 164
Query: 74 VTVCHMLFPLLR--PHARVVNVASQFGM 99
P L+ A ++N++ +
Sbjct: 165 YLASKACIPYLKKSKVAHILNISPPLNL 192
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 54.9 bits (133), Expect = 4e-10
Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 10/87 (11%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
DV N I + + Q G LD LVNNAG I + + L N
Sbjct: 82 PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG-IVDYPQRVDEMSVERIERMLRVNVTGS 140
Query: 74 VTVC-----HMLFPLLRPHARVVNVAS 95
+ M +VNV+S
Sbjct: 141 ILCAAEAVRRMSRLYSGQGGAIVNVSS 167
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 54.9 bits (133), Expect = 4e-10
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 9/96 (9%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
+ VR DV + + L ++ + LD+LVNNAG P + +A
Sbjct: 83 NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN-VPPVPLEEVTFEQWNGIVA 141
Query: 68 TNFFALVTVCHMLFPLLRPHA----RVVNVASQFGM 99
N F +++ R++N S
Sbjct: 142 ANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ 177
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 54.5 bits (132), Expect = 5e-10
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE 63
+ K+ LD+ + T DI ++G +DILVN A + G + +
Sbjct: 51 IMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG--SLSEPVD 108
Query: 64 ---TTLATNFFALVTVCHMLFPLL--RPHARVVNVAS 95
+ N A + + ++ + + + NVAS
Sbjct: 109 NFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVAS 145
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 54.5 bits (132), Expect = 5e-10
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT-------LATNF 70
Q DV + ++ +L + GG+D+LVNNAGI P AET +A N
Sbjct: 83 QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI-----MPLTTIAETGDAVFDRVIAVNL 137
Query: 71 FALVTVCHMLFPLLRPHARVVNVAS 95
LR R++N+++
Sbjct: 138 KGTFNTLREAAQRLRVGGRIINMST 162
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 54.6 bits (132), Expect = 5e-10
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQA----ETTL 66
N V QLD+ I +++ + +DILVNNAG G+ GQ A +
Sbjct: 86 NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA-LGSDRVGQIATEDIQDVF 144
Query: 67 ATNFFALVTVCHMLFPLL--RPHARVVNVAS 95
TN AL+ + + P+ + +VN+ S
Sbjct: 145 DTNVTALINITQAVLPIFQAKNSGDIVNLGS 175
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 54.4 bits (132), Expect = 6e-10
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGG-LDILVNNAGIIYRGNAPFGQQAETT------ 65
V D KL + + GG LDIL+NN G I + T
Sbjct: 64 QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPT-----LDYTAEDFSF 118
Query: 66 -LATNFFALVTVCHMLFPLLRP--HARVVNVASQFGML 100
++TN + + + PLL+ ++ ++S G++
Sbjct: 119 HISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV 156
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 54.5 bits (132), Expect = 6e-10
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 20 DVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG---QQAETTLATNFFALVTV 76
D+ +E + + Q G L+ILVNN Y +Q E T N F+ V
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164
Query: 77 CHMLFPLLRPHARVVNVAS 95
L+ ++N AS
Sbjct: 165 TKAALSHLKQGDVIINTAS 183
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 54.1 bits (131), Expect = 8e-10
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 20 DVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG---QQAETTLATNFFALVTV 76
D+ +E+ L + GGLDIL AG +Q + T A N FAL +
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167
Query: 77 CHMLFPLLRPHARVVNVAS 95
PLL A ++ +S
Sbjct: 168 TQEAIPLLPKGASIITTSS 186
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 54.1 bits (131), Expect = 8e-10
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 18 QLDVLNETSIHKLHDDI------QTQHGGLDILVNNAGIIYRGNAPFGQQAETT------ 65
++ + + L+ + +T DIL+NNAGI P ETT
Sbjct: 63 GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-----GPGAFIEETTEQFFDR 117
Query: 66 -LATNFFALVTVCHMLFPLLRPHARVVNVAS 95
++ N A + LR ++R++N++S
Sbjct: 118 MVSVNAKAPFFIIQQALSRLRDNSRIINISS 148
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 54.1 bits (131), Expect = 8e-10
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAET 64
+ + + F DV E + L + + G LD +VNNAG P A+
Sbjct: 47 RALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG 106
Query: 65 ---TLATNFFALVTVCHMLFPLLRP-HARVVNVASQFGM 99
L N T+ + P LR V+N++S G
Sbjct: 107 FRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA 145
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 54.1 bits (131), Expect = 8e-10
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 13/96 (13%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V +DV N S+ + Q G +DILV AGI + + N
Sbjct: 64 VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICIS-EVKAEDMTDGQWLKQVDIN 122
Query: 70 ----FFALVTVC-HMLFPLLRPHARVVNVASQFGML 100
F + V M L + +V + S G++
Sbjct: 123 LNGMFRSCQAVGRIM---LEQKQGVIVAIGSMSGLI 155
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 53.3 bits (129), Expect = 1e-09
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQA----ETTLA 67
+NV + D+ + + +L + + +V++AG Y G +Q +T +
Sbjct: 47 NNVGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFG--LLQEQDPEQIQTLIE 101
Query: 68 TNFFALVTVCHMLFPLLRPHAR-VVNVASQFG 98
N + + V L + VV + S
Sbjct: 102 NNLSSAINVLRELVKRYKDQPVNVVMIMSTAA 133
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 53.7 bits (130), Expect = 1e-09
Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 12/104 (11%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
F D+ + +L D+ + GG+D+L+NNAG + P + + + N
Sbjct: 59 AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRK-PLPEIDDTFYDAVMDAN 117
Query: 70 FFALVTVC-----HML--FPLLRPHARVVNVASQFGMLYKVPSQ 106
++V H+ + V++ S G P
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA 161
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 53.4 bits (129), Expect = 1e-09
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
Query: 11 NDNVRFHQLDV-LNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATN 69
N+ FH DV + KL I Q +DIL+N AGI+ Q E T+A N
Sbjct: 54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD------HQIERTIAIN 107
Query: 70 FFALVTVCHMLFPLLRPH-----ARVVNVASQFG 98
F LV + + N+ S G
Sbjct: 108 FTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG 141
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 53.3 bits (129), Expect = 1e-09
Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLAT 68
R + DV +E ++ D + G +D L NNAG AP L
Sbjct: 57 EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ-GAFAPVQDYPSDDFARVLTI 115
Query: 69 NFFALVTVCHMLFPLLRP--HARVVNVASQFGML 100
N V + + + R+VN AS G+
Sbjct: 116 NVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK 149
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 53.3 bits (129), Expect = 1e-09
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLA 67
+ D + F DV + + L D +HG LDI+ N G++ E
Sbjct: 61 GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSI---LEAGNE 116
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 53.3 bits (129), Expect = 1e-09
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 15/96 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
DV + ++ + + + ILVN+AGI + + +A N
Sbjct: 60 AARIVADVTDAEAMTAAAAEAE-AVAPVSILVNSAGIARL--HDALETDDATWRQVMAVN 116
Query: 70 FFALVTVC-----HMLFPLLRPHARVVNVASQFGML 100
+ M + R +VN+ S G +
Sbjct: 117 VDGMFWASRAFGRAM---VARGAGAIVNLGSMSGTI 149
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 53.4 bits (129), Expect = 1e-09
Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 9/96 (9%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
D+ DV + S+ L + G +D+L NNAG P +
Sbjct: 74 DDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTG-APAIPMEDLTFAQWKQVVD 132
Query: 68 TNFFALVTVCHMLFPLLRPHA----RVVNVASQFGM 99
TN F +++ R++N S
Sbjct: 133 TNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT 168
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 53.4 bits (129), Expect = 2e-09
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPF----GQQAETTLATN 69
V F + D+ + +S D + + G +D LVNNAGI F + +T + N
Sbjct: 81 VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVN 140
Query: 70 ----FFALVTVC-HMLFPLLRPHARVVNVAS 95
F V ML R ++N+ S
Sbjct: 141 LRGTVFFTQAVLKAMLASDARASRSIINITS 171
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 53.4 bits (129), Expect = 2e-09
Identities = 19/96 (19%), Positives = 28/96 (29%), Gaps = 10/96 (10%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFF 71
N DV + + + G +D L+ NAGI + E + F
Sbjct: 51 GNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIW-DYSTALADLPEDKIDAAFD 109
Query: 72 ALVTV-------C--HMLFPLLRPHARVVNVASQFG 98
+ V L L+ VV S G
Sbjct: 110 DIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAG 145
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 53.0 bits (128), Expect = 2e-09
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQA-- 62
V LDV + ++ D++ + L L+NNAG+ G P
Sbjct: 62 AGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLA-LGTDPAQSCDLD 120
Query: 63 --ETTLATNFFALVTVCHMLFPLLRPHAR---VVNVAS 95
+T + TN L+ +L P L H +VN+ S
Sbjct: 121 DWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 52.9 bits (128), Expect = 2e-09
Identities = 20/102 (19%), Positives = 28/102 (27%), Gaps = 13/102 (12%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
DV +E L + + GGLD NNAG + + TL TN
Sbjct: 59 AAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAM-GEISSLSVEGWRETLDTN 117
Query: 70 ----FFALVTVC-HMLFPLLRPHARVVNVASQFGMLYKVPSQ 106
F A + + +S G
Sbjct: 118 LTSAFLAAKYQVPAI---AALGGGSLTFTSSFVGHTAGFAGV 156
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 52.6 bits (127), Expect = 2e-09
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE--TTLATN 69
N Q+DV ++ + + +G D +VNNAG++ G + E N
Sbjct: 59 PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVN 118
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVAS 95
L+ + + R ++N++S
Sbjct: 119 VLGLLNGMQAVLAPMKARNCGTIINISS 146
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 52.5 bits (127), Expect = 2e-09
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
K N+ + DV + ++ K + + +D+LVNNA
Sbjct: 40 ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACR 85
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 52.6 bits (127), Expect = 3e-09
Identities = 10/100 (10%), Positives = 32/100 (32%), Gaps = 12/100 (12%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+ ++ ++ + S+ + + G +D+ V NAG+ + ++ +
Sbjct: 85 SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD 144
Query: 70 FFALVTVC-----HMLFPLLRPHARVVNVASQFGMLYKVP 104
+ ++ +S G + +P
Sbjct: 145 LNGVYYCSHNIGKIF---KKNGKGSLIITSSISGKIVNIP 181
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 52.5 bits (127), Expect = 3e-09
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 16/98 (16%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
++DV +E I + D GG+D LV NAG++ A +A
Sbjct: 75 CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV--HLASLIDTTVEDFDRVIA 132
Query: 68 TN----FFALVTVCHMLFPLLRPHA--RVVNVASQFGM 99
N + P + +VN++S G
Sbjct: 133 INLRGAWLC----TKHAAPRMIERGGGAIVNLSSLAGQ 166
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 52.6 bits (127), Expect = 3e-09
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAP-FGQQA-ETTLATNF 70
N + DV +E I + I+++ G +DILVNNAGII R + +
Sbjct: 84 NAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDL 143
Query: 71 FALVTVC-----HMLFPLLRPHARVVNVAS 95
A V M + + H +++N+ S
Sbjct: 144 NAPFIVSKAVIPSM---IKKGHGKIINICS 170
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 52.1 bits (126), Expect = 3e-09
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT------- 65
++ LDV + I + +++ LD+L N AG ++ G +
Sbjct: 51 GIQTRVLDVTKKKQIDQFANEV----ERLDVLFNVAGFVHHGTV-----LDCEEKDWDFS 101
Query: 66 LATNFFALVTVCHMLFPLLRPH--ARVVNVASQFGMLYKVPSQ 106
+ N ++ + P + ++N++S + V ++
Sbjct: 102 MNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNR 144
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 52.6 bits (127), Expect = 3e-09
Identities = 19/86 (22%), Positives = 35/86 (40%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFFAL 73
++DV + ++ + + + G LD++V NAGI G Q +F +
Sbjct: 73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGV 132
Query: 74 VTVCHMLFPLLRPHARVVNVASQFGM 99
+ H P L A ++ S G+
Sbjct: 133 INTVHAALPYLTSGASIITTGSVAGL 158
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 52.2 bits (126), Expect = 3e-09
Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 8/91 (8%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
+ D+ E + GG+DILVNNA I+ N
Sbjct: 68 KCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLR--GTLDTPMKRFDLMQQVNARGS 125
Query: 74 VTVCHMLFPLLRP--HARVVNVASQFGMLYK 102
P L + ++ +A +
Sbjct: 126 FVCAQACLPHLLQAPNPHILTLAPPPSLNPA 156
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 51.8 bits (125), Expect = 4e-09
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+ DV +E + D+ + G LDI+V NAGI AP T+A N
Sbjct: 79 AIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGIN-GVWAPIDDLKPFEWDETIAVN 137
Query: 70 ----FFALVTVCHMLFPLLRPHA--RVVNVASQFGM 99
F H+ P L+ +V V+S G
Sbjct: 138 LRGTFLT----LHLTVPYLKQRGGGAIVVVSSINGT 169
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 51.7 bits (125), Expect = 5e-09
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 19/101 (18%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT------ 65
D V + DV +E ++ Q G +D+LVNNAGI GN+ G T
Sbjct: 52 DKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGIT--GNSEAGVLHTTPVEQFDK 109
Query: 66 -LATN----FFALVTVCHMLFPLLRPHA--RVVNVASQFGM 99
+A N F C + P + +VN+AS +
Sbjct: 110 VMAVNVRGIFL----GCRAVLPHMLLQGAGVIVNIASVASL 146
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 51.8 bits (125), Expect = 5e-09
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGN 55
+ QL ++E +L + + + +G +D+LV+N
Sbjct: 46 ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQ 87
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 51.8 bits (125), Expect = 5e-09
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 14/97 (14%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT------ 65
++DV + + + + G +D+LVNNAG GN
Sbjct: 73 SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNV-----VTIPEETWDR 127
Query: 66 -LATNFFALVTVCHMLFPLLRPH--ARVVNVASQFGM 99
++ N + + P++R + ++N S
Sbjct: 128 IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT 164
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 51.8 bits (125), Expect = 5e-09
Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 11/98 (11%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
D D+ E + + ++ G +DILVNNAGI ++ +
Sbjct: 55 DAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHK-PQNAELVEPEEFDRIVG 113
Query: 68 TNFFALVTVCHMLFPLLRPH------ARVVNVASQFGM 99
N + + L P + + ++NVAS
Sbjct: 114 VNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG 151
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 51.7 bits (125), Expect = 5e-09
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG-------QQAETT 65
+V V +L HGG+DILV+NA + N FG + +
Sbjct: 64 SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV----NPFFGNIIDATEEVWDKI 119
Query: 66 LATNFFALVTVCHMLFPLL--RPHARVVNVAS 95
L N A V + + P + R V+ V+S
Sbjct: 120 LHVNVKATVLMTKAVVPEMEKRGGGSVLIVSS 151
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 51.4 bits (124), Expect = 6e-09
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
H D+ + I L + + GG+DILVNNAGI + AP Q +A N
Sbjct: 53 AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGI--QHVAPVEQFPLESWDKIIALN 110
Query: 70 FFALVTVCHMLFPLLRP-----HARVVNVAS 95
L V H L R++N+AS
Sbjct: 111 ---LSAVFHGTRLALPGMRARNWGRIINIAS 138
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 51.4 bits (124), Expect = 6e-09
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFAL 73
Q D+ NE + KL D + + G +DI +N G + + P + +E N
Sbjct: 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK--PIVETSEAEFDAMDTINNKVA 126
Query: 74 VTVCHMLFPLLRPHARVVNVAS 95
+ P+ ++ +A+
Sbjct: 127 YFFIKQAAKHMNPNGHIITIAT 148
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 51.3 bits (124), Expect = 7e-09
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 13/103 (12%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE- 63
+ K + +D+ + + K G +D+LVNNA ++ PF + +
Sbjct: 45 VSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIM--QPFLEVTKE 98
Query: 64 ---TTLATNFFALVTVCHMLFPLLRPHA---RVVNVASQFGML 100
+ + N ++ V M+ + +VNV+S +
Sbjct: 99 AFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV 141
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 51.0 bits (123), Expect = 8e-09
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
++DV NE + + + ++G +DILVNNAGI +P + N
Sbjct: 55 SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE--QYSPLHLTPTEIWRRIIDVN 112
Query: 70 ----FFALVTVCHMLFPLLRPH--ARVVNVASQFGM 99
+ P++ ++N+AS
Sbjct: 113 VNGSYLM----AKYTIPVMLAIGHGSIINIASVQSY 144
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 51.0 bits (123), Expect = 8e-09
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE---TTLATNFFA 72
+ D+ +E + L D ++ G +DILVNNAG G PF N F+
Sbjct: 64 ACRCDITSEQELSALADFAISKLGKVDILVNNAGGG--GPKPFDMPMADFRRAYELNVFS 121
Query: 73 LVTVCHMLFPLLRP--HARVVNVASQFGML 100
+ ++ P + ++ + S
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMAAEN 151
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 50.9 bits (123), Expect = 8e-09
Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 13/100 (13%)
Query: 6 KVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE-- 63
+ + + +D+ + + + G +D+LVNNA + PF + +
Sbjct: 46 SLVRECPGIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALL--QPFLEVTKEA 99
Query: 64 --TTLATNFFALVTVCHMLFPLLRPHAR---VVNVASQFG 98
+ N A++ V ++ L +VNV+SQ
Sbjct: 100 FDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS 139
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 51.1 bits (123), Expect = 1e-08
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 12/102 (11%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V Q DV + + ++ G +I++NNA + +P + + T
Sbjct: 78 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIV 135
Query: 70 FFALVTVCHMLFP-LLRPH--ARVVNVAS---QFGMLYKVPS 105
V + L++ A +++ + + G + VPS
Sbjct: 136 LNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS 177
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 50.7 bits (122), Expect = 1e-08
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V H D+ + I + + + GG DILVNNAG+ + +A N
Sbjct: 78 VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVN 135
Query: 70 FFALVTVCHMLFPLLRPHA--RVVNVAS 95
+ P ++ R++N+AS
Sbjct: 136 LSSSFHTIRGAIPPMKKKGWGRIINIAS 163
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 50.6 bits (122), Expect = 1e-08
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNA 56
+ DV + + D + + GG+DI V NAGI+
Sbjct: 83 ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM 125
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 50.7 bits (122), Expect = 1e-08
Identities = 12/88 (13%), Positives = 24/88 (27%), Gaps = 9/88 (10%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFG----QQAETTLATN 69
+ LD NE + + H L++ + N G P +
Sbjct: 58 IVARSLDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNF--PILETTDRVFRKVWEMA 114
Query: 70 FFALVTVCHMLFPLLRPHA--RVVNVAS 95
+A L+ H ++ +
Sbjct: 115 CWAGFVSGRESARLMLAHGQGKIFFTGA 142
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 50.2 bits (121), Expect = 1e-08
Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 7/88 (7%)
Query: 20 DVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGN-APFGQQAE----TTLATNFFALV 74
L E +L D +D +V+N I N P +E +
Sbjct: 52 IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111
Query: 75 TVCHMLFPLLRP--HARVVNVASQFGML 100
+ LR A V+ + S G
Sbjct: 112 LLLQSAIAPLRAAGGASVIFITSSVGKK 139
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 50.2 bits (121), Expect = 1e-08
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 15 RFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT-------LA 67
F Q+D+ +E + ++ G +D+LVNNA I A G L
Sbjct: 52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAI-----AAPGSALTVRLPEWRRVLE 106
Query: 68 TNFFALVTVCHMLFPLLRPHA--RVVNVASQFGM 99
N A + + + +R +VNVAS G+
Sbjct: 107 VNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL 140
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 50.3 bits (121), Expect = 2e-08
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V + D+ ++ L D+ Q G +DILVNNAGI + A LA N
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALN 114
Query: 70 FFALVTVCHMLFPLLRP--HARVVNVAS 95
A+ P ++ R++N+AS
Sbjct: 115 LSAVFHGTAAALPHMKKQGFGRIINIAS 142
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 50.2 bits (121), Expect = 2e-08
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLA 67
+ DV N + D I ++G + +LVNNAGI G ++
Sbjct: 48 YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKI-----ESMSMG 96
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 49.8 bits (120), Expect = 3e-08
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 15/96 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V DV +E + + G +D NNAGI + P ++ N
Sbjct: 66 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSIN 124
Query: 70 ----FFALVTVCHMLFPLLRPHA--RVVNVASQFGM 99
F + ++R VVN AS G+
Sbjct: 125 LRGVFLG----LEKVLKIMREQGSGMVVNTASVGGI 156
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 49.5 bits (119), Expect = 3e-08
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+V ++ + SI +L + + + G+DILVNNAGI
Sbjct: 73 KDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta
protein, NAD(P)-binding rossmann fold, csgid,
oxidoreductase; 1.95A {Francisella tularensis subsp}
Length = 247
Score = 49.4 bits (119), Expect = 3e-08
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ R L++ + SI +I+ ++ +DILVNNAGI
Sbjct: 51 EKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGI 92
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 49.5 bits (119), Expect = 3e-08
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ ++ V + S KL D+ G +D + NAG
Sbjct: 74 KAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGA 111
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 49.5 bits (119), Expect = 4e-08
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
V Q DV + L + GG+D++ NAG+
Sbjct: 61 KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV 98
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 49.0 bits (118), Expect = 4e-08
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLAT 68
V + DV + + + + +D+L NNAGI+ G P + ++ LA
Sbjct: 57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIM-DGVTPVAEVSDELWERVLAV 115
Query: 69 N----FFALVTVC-HMLFPLLRPHARVVNVASQFGM 99
N F++ V M L + +VN AS G+
Sbjct: 116 NLYSAFYSSRAVIPIM---LKQGKGVIVNTASIAGI 148
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 49.0 bits (118), Expect = 4e-08
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 15/91 (16%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
D+ + L GGL +LV+ A + R P + + L +
Sbjct: 45 AVPLPTDL-EKDDPKGLVKRALEALGGLHVLVHAAAVNVR--KPALELSYEEWRRVLYLH 101
Query: 70 FFALVTVC-----HMLFPLLRPHARVVNVAS 95
+ HM RV+ + S
Sbjct: 102 LDVAFLLAQAAAPHM---AEAGWGRVLFIGS 129
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 49.1 bits (118), Expect = 4e-08
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ +Q DV N + K I G + L+ NAG+
Sbjct: 66 TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGV 102
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 49.1 bits (118), Expect = 4e-08
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE--TTLATNFF 71
D+ + + +L I ++G +D LVNNAG+ G + + T+ TN
Sbjct: 60 TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 119
Query: 72 ALVTVCHMLFPLL--RPHARVVNVAS 95
+ LF L+ + + + S
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITS 145
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 48.8 bits (117), Expect = 5e-08
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
VRF DV NE + + G + LVN AG
Sbjct: 53 AAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGT 91
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 49.2 bits (118), Expect = 5e-08
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
NV +LDV + S + G LD++ NAGI
Sbjct: 92 NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 48.6 bits (117), Expect = 5e-08
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
DN + L+V N SI + I + GG+DILVNNAGI
Sbjct: 54 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 48.6 bits (117), Expect = 6e-08
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
++++L+E SI+K ++I G+DILVNNAGI
Sbjct: 58 KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 48.8 bits (117), Expect = 6e-08
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+ Q+DV + ++ DD TQ G LDI++ NA + + + N
Sbjct: 91 IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA-SEGTRLNRMDPKTWRDMIDVN 149
Query: 70 ----FFAL-VTVCHMLFPLLRPHARVVNVASQFGM 99
+ V + H++ + +V +S G+
Sbjct: 150 LNGAWITARVAIPHIM--AGKRGGSIVFTSSIGGL 182
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 48.4 bits (116), Expect = 7e-08
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+N F DV +E + + + G +D+ VN AGI
Sbjct: 58 NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGI 96
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 48.3 bits (116), Expect = 8e-08
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+DV + + ++ + + LD LVN AGI
Sbjct: 47 PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGI 84
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 48.3 bits (116), Expect = 8e-08
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE---TTLATNF 70
+ +V +E + Q G + +LVNNAG PF N
Sbjct: 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG-GGGPK-PFDMPMSDFEWAFKLNL 120
Query: 71 FALVTVCHMLFPLLRP--HARVVNVAS 95
F+L + + P ++ ++N++S
Sbjct: 121 FSLFRLSQLAAPHMQKAGGGAILNISS 147
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 48.3 bits (116), Expect = 8e-08
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
++ D+ + ++ + + G +D LVNNAG+
Sbjct: 69 DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGV 106
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 48.4 bits (116), Expect = 8e-08
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
F Q DV ++ + + G LDILVNNAG+
Sbjct: 58 QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV 96
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ R L+V + T++ L + + G L++LVNNAGI
Sbjct: 69 GAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI 115
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 48.4 bits (116), Expect = 9e-08
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+DV ++ D + G +DIL+N A + P G + T + +
Sbjct: 79 CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFL--CPAGALSFNAFKTVMDID 136
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVAS---QFGMLYKVPS 105
V +L+ +VN+ + G +V +
Sbjct: 137 TSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHA 177
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus
anthracis}
Length = 246
Score = 48.2 bits (116), Expect = 9e-08
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ + DV N + + G +DILVNNAG+
Sbjct: 55 DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 48.0 bits (115), Expect = 1e-07
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
V Q ++ NE ++ L G ++ LVNN G
Sbjct: 74 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural
genomics, secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
V ++L + L GGLD LVNNAGI
Sbjct: 54 VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
NV + DV N + + G +DILVNNAGI
Sbjct: 56 NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 48.0 bits (115), Expect = 1e-07
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
+ ++DV + ++ D Q G LDI+V NAGI G+ + +E + N
Sbjct: 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGD-TLDKTSEEDWTEMIDIN 136
Query: 70 ----FFAL-VTVCHMLFPLLRPHARVVNVASQFGM 99
+ + V HM+ ++ +S G+
Sbjct: 137 LAGVWKTVKAGVPHMI--AGGRGGSIILTSSVGGL 169
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium
loti} PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
R D+ + S+ L +IQ GG+DILVNNA I
Sbjct: 53 KARAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 47.9 bits (115), Expect = 1e-07
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ +V I ++ I G LD+ VNNA
Sbjct: 60 KANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS 92
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 47.9 bits (115), Expect = 1e-07
Identities = 21/96 (21%), Positives = 29/96 (30%), Gaps = 13/96 (13%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLA 67
+ ++DV S+ GG D+L NAG+ P +
Sbjct: 58 NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVS--TMRPAVDITDEEWDFNFD 115
Query: 68 TN----FFALVTVC-HMLFPLLRPHARVVNVASQFG 98
N F A C H L +VN AS
Sbjct: 116 VNARGVFLANQIACRHFL--ASNTKGVIVNTASLAA 149
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
V DV + ++ L + G LD+LVNNAG+
Sbjct: 73 GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 9 KNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ Q +V + + + ++ +Q G LD+LVNNAGI
Sbjct: 51 AKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold,
rossmann fold, oxidoreductase; HET: NAP; 2.30A
{Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 47.9 bits (115), Expect = 1e-07
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
DV E + + G +D++VNNAGI
Sbjct: 57 GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 47.5 bits (114), Expect = 1e-07
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ + +V + S + D ++ + G +D+LVNNAGI
Sbjct: 64 DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 47.6 bits (114), Expect = 1e-07
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ + + +DV + S + + + G +D+L+NNAGI
Sbjct: 76 DFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGI 113
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 47.5 bits (114), Expect = 2e-07
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ DV E+ + L + G LD+++NNAG+
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 47.5 bits (114), Expect = 2e-07
Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 15/92 (16%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETT------- 65
V D+ I +L + + GG DILV + G G+ E
Sbjct: 59 QVDIVAGDIREPGDIDRLFEKAR-DLGGADILVYSTGG-----PRPGRFMELGVEDWDES 112
Query: 66 LATNFFALVTVCHMLFPLL--RPHARVVNVAS 95
+ V V + + R+V + S
Sbjct: 113 YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGS 144
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 47.6 bits (114), Expect = 2e-07
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ DV + I ++ + I T+H +DILVNNAGI
Sbjct: 94 ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+DV + S + D + GG+D LVNNA I
Sbjct: 60 AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAI 96
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 47.6 bits (114), Expect = 2e-07
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ DV E+ + L + + G LD+LVNNAGI
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 47.2 bits (113), Expect = 2e-07
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
H D+ + +I + HG D+LVNNAG+ P +A N
Sbjct: 80 AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVG-WFGGPLHTMKPAEWDALIAVN 138
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVAS 95
A + P + ++N++S
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRGHIINISS 166
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas;
oxidoreductase; 1.99A {Streptomyces coelicolor}
Length = 253
Score = 47.2 bits (113), Expect = 2e-07
Identities = 8/33 (24%), Positives = 21/33 (63%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ D+ + + + + +I+ HG +++L+ NAG+
Sbjct: 65 KCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus
SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
V + DV + + + G DILVNNAGI
Sbjct: 55 RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGI 92
>3imf_A Short chain dehydrogenase; structural genomics, infectious D
center for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ Q+DV N I K+ + I + G +DIL+NNA
Sbjct: 57 ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAG 93
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 47.2 bits (113), Expect = 2e-07
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 16/93 (17%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATN 69
V DV + +H + G + ILVN+AG G + L TN
Sbjct: 75 VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN-GGG-ETADLDDALWADVLDTN 132
Query: 70 ----FF---ALVTVCHMLFPLLRPHARVVNVAS 95
F ++ M R+VN+AS
Sbjct: 133 LTGVFRVTREVLRAGGM---REAGWGRIVNIAS 162
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 47.1 bits (113), Expect = 2e-07
Identities = 6/38 (15%), Positives = 15/38 (39%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
DV + ++ + + + G L + + AG+
Sbjct: 53 EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 47.2 bits (113), Expect = 2e-07
Identities = 8/33 (24%), Positives = 21/33 (63%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
++DV + ++ + ++ G +++LV+NAG+
Sbjct: 59 EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 46.7 bits (112), Expect = 2e-07
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+DV + S+ + + G LD +V+ AGI
Sbjct: 55 VMDVADPASVERGFAEALAHLGRLDGVVHYAGI 87
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 46.9 bits (112), Expect = 2e-07
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
DV + I L + ++G +D+LVNNAG
Sbjct: 73 ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 46.7 bits (112), Expect = 3e-07
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLAT 68
Q+DV + SI GGLDILVNNA + AP + A
Sbjct: 55 AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALF--DLAPIVEITRESYEKLFAI 112
Query: 69 NFFALVTVCHMLFPLLRPHAR---VVNVASQFGM 99
N + + R ++N+ASQ G
Sbjct: 113 NVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR 146
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 46.5 bits (111), Expect = 4e-07
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 31/96 (32%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGG-LDILVNNAGIIYRGNAPFGQQAET------------ 64
LDV + ++ K+ + HGG +DILVNNAGI T
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI-------------TRDKLLANMDEKR 311
Query: 65 ---TLATNFFALVTVCHMLFP--LLRPHARVVNVAS 95
+A N A + L + RV+ ++S
Sbjct: 312 WDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSS 347
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 46.0 bits (110), Expect = 5e-07
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLA 67
LDV ++ ++ +L D Q G LD++V NAG+ +G+ E T
Sbjct: 79 ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGV-----LSWGRVWELTDE 127
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 45.6 bits (109), Expect = 6e-07
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLA 67
+ +D + + K+ DD G LDI+V NAG+ A + T
Sbjct: 75 IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGV-----AAPQAWDDITPE 123
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAG 49
++F Q DV + +HK+ ++ + G +D L+NNAG
Sbjct: 58 RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 45.8 bits (109), Expect = 8e-07
Identities = 16/123 (13%), Positives = 27/123 (21%), Gaps = 24/123 (19%)
Query: 2 CNCKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRG------- 54
+ V + V T +L T G D+LVNNA Y
Sbjct: 67 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126
Query: 55 ---------NAPFGQQAETTLATNFFALVTVC-----HMLFPLLRPHA---RVVNVASQF 97
+N A + + + ++N+
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 186
Query: 98 GML 100
Sbjct: 187 TNQ 189
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 45.2 bits (108), Expect = 9e-07
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGII 51
F LDV ++ + D+ + GG D+LVNNAGI
Sbjct: 54 KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIA 92
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD;
1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 45.2 bits (108), Expect = 1e-06
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
++DV + + + + GG D++VNNAG+
Sbjct: 53 AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGV 89
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 45.3 bits (108), Expect = 1e-06
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 24/102 (23%)
Query: 18 QLDVLNETSIH----KLHDDIQTQHGGLDILVNNAGIIYRG------NAPFGQQAETT-- 65
+ D+ +S+ + D G D+LVNNA Y + A+
Sbjct: 68 KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA 127
Query: 66 -----LATNFFALVTVCHMLFPLLRPHA-------RVVNVAS 95
+N A + + VVN+
Sbjct: 128 QVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 44.9 bits (107), Expect = 1e-06
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE---TTLATN- 69
+ Q DV + S+ + G LDI+V NAGI AP + + N
Sbjct: 76 IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI-----APMSAGDDGWHDVIDVNL 130
Query: 70 ---FFAL-VTVCHMLFPLLRPHARVVNVASQFGM 99
+ + V + ++ +V ++S G+
Sbjct: 131 TGVYHTIKVAIPTLV--KQGTGGSIVLISSSAGL 162
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 44.9 bits (107), Expect = 1e-06
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 13 NVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE---TTLATN 69
++ D+ E + + ++ +DIL+NN G I+ F E N
Sbjct: 62 ILQPVVADLGTEQGCQDVIE----KYPKVDILINNLG-IFEPVEYFDIPDEDWFKLFEVN 116
Query: 70 FFALVTVCHMLFPLL--RPHARVVNVAS 95
+ V + + R RV+ +AS
Sbjct: 117 IMSGVRLTRSYLKKMIERKEGRVIFIAS 144
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 44.9 bits (107), Expect = 2e-06
Identities = 18/105 (17%), Positives = 27/105 (25%), Gaps = 24/105 (22%)
Query: 18 QLDVLNE----TSIHKLHDDIQTQHGGLDILVNNAGIIYRG------------NAPFGQQ 61
Q D+ N S ++ + G D+LVNNA Y Q
Sbjct: 80 QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 62 AETTLATN----FF----ALVTVCHMLFPLLRPHARVVNVASQFG 98
+ TN F + +VN+
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV 184
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 44.1 bits (105), Expect = 2e-06
Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 6 KVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGG-LDILVNNAGI 50
K N Q DV + L + +Q ++V+ AGI
Sbjct: 57 KEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 44.1 bits (105), Expect = 2e-06
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 17 HQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
++DV + ++ + + GG+DI + NAGI
Sbjct: 76 AKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI 109
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 44.4 bits (105), Expect = 3e-06
Identities = 16/123 (13%), Positives = 27/123 (21%), Gaps = 24/123 (19%)
Query: 2 CNCKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRG------- 54
+ V + V T +L T G D+LVNNA Y
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163
Query: 55 ---------NAPFGQQAETTLATNFFALVTVC-----HMLFPLLRPHA---RVVNVASQF 97
+N A + + + ++N+
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 223
Query: 98 GML 100
Sbjct: 224 TNQ 226
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 44.2 bits (105), Expect = 3e-06
Identities = 6/39 (15%), Positives = 13/39 (33%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+ F +V +E S+ + +V + G
Sbjct: 76 NRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGF 114
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 43.8 bits (104), Expect = 3e-06
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
D RF DV +E ++ D + G L I+VN AG
Sbjct: 52 DRARFAAADVTDEAAVASALDLAE-TMGTLRIVVNCAGT 89
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 242
Score = 43.8 bits (104), Expect = 3e-06
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
+++ + + DV E + + Q + L +V+ AG+
Sbjct: 38 GEDLIYVEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGV 76
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 43.8 bits (104), Expect = 3e-06
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 14 VRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGII 51
+ Q DV + S+ + D+ + G +DILV+N GI
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS 146
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 41.3 bits (98), Expect = 2e-05
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGI 50
DN ++ N+ L + LDILV NAGI
Sbjct: 60 DNYTIEVCNLANKEECSNLIS----KTSNLDILVCNAGI 94
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 41.2 bits (97), Expect = 2e-05
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 39 GGLDILVNNAGIIYRGNAPFG----QQAETTLATNFFALVTVCHMLFPLLRP--HARVVN 92
G +D++VNNAGI+ R + F + + + V + ++ + R++
Sbjct: 91 GRIDVVVNNAGIL-R-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM 148
Query: 93 VASQFGML 100
AS G+
Sbjct: 149 TASASGIY 156
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 40.2 bits (94), Expect = 8e-05
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Query: 39 GGLDILVNNAGIIYRGNAPFG----QQAETTLATNFFALVTVCHMLFPLLR--PHARVVN 92
G +DILVNNAGI+ R + Q + FP ++ + R++
Sbjct: 101 GRVDILVNNAGIL-R-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIM 158
Query: 93 VASQFGML 100
+S G+
Sbjct: 159 TSSNSGIY 166
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 40.1 bits (94), Expect = 9e-05
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 39 GGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFALVTVCHMLFPLLRP--HARVVN 92
G +DILVNNAGI+ R + F + ++ + + + + +P R++N
Sbjct: 394 GTIDILVNNAGIL-R-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIIN 451
Query: 93 VASQFGML 100
+ S G+
Sbjct: 452 ITSTSGIY 459
Score = 40.1 bits (94), Expect = 9e-05
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 39 GGLDILVNNAGIIYRGNAPFG----QQAETTLATNFFALVTVCHMLFPLLRP--HARVVN 92
G + +++NNAGI+ R +A + + + + V +P + + R+VN
Sbjct: 90 GTVHVIINNAGIL-R-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVN 147
Query: 93 VASQFGML 100
+S G+
Sbjct: 148 TSSPAGLY 155
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 39.4 bits (93), Expect = 1e-04
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 27 IHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE---TTLATNFFALVTVCHMLFPL 83
+ K D + + +DILV NAG + E + + F ++ + P
Sbjct: 68 LRKDLDLLFEKVKEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 126
Query: 84 L--RPHARVVNVASQFG 98
+ + R+V + S
Sbjct: 127 MKEKGWGRIVAITSFSV 143
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 39.1 bits (92), Expect = 1e-04
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 7/70 (10%)
Query: 33 DIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLATNFFALVTVCHMLFPLLRP--HARV 90
+ G LD LV AG+ + +A N+F + + L L
Sbjct: 55 VLDRCGGVLDGLVCCAGV-----GVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAA 109
Query: 91 VNVASQFGML 100
V V S
Sbjct: 110 VIVGSIAATQ 119
Score = 38.0 bits (89), Expect = 3e-04
Identities = 7/70 (10%), Positives = 16/70 (22%), Gaps = 6/70 (8%)
Query: 32 DDIQTQHGGLDILVNNAGIIYRGNAPFGQQAE----TTLATNFFALVTVCHMLFPLLRP- 86
+ + GL + VN G+ + + + A P++
Sbjct: 72 VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAM 131
Query: 87 -HARVVNVAS 95
Sbjct: 132 LAGDEARAIE 141
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 35.8 bits (83), Expect = 0.002
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 12/73 (16%)
Query: 39 GGLDILVNNAGIIYRGNAPFG---QQAETTLATNFFALVTVCHMLFPLLRP--------H 87
GGLD+LVNNAGI+ R ++ + +A + R
Sbjct: 113 GGLDVLVNNAGIV-RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVD 171
Query: 88 ARVVNVASQFGML 100
R++N +S G+
Sbjct: 172 GRIINTSSGAGLQ 184
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 33.4 bits (77), Expect = 0.015
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 10 NNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
N +Q+DV ++ + + I G +D +
Sbjct: 82 NQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVY 117
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A*
1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A*
1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 32.5 bits (75), Expect = 0.029
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
Q DV + SI + ++ D V
Sbjct: 63 VLQCDVAEDASIDTMFAELGKVWPKFDGFV 92
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 32.5 bits (75), Expect = 0.029
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 10 NNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
+ ++ DV N+ I I+ Q G + +
Sbjct: 57 DRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIA 92
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty
acid biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 32.2 bits (74), Expect = 0.032
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
+K+ + + DV + + L ++ GGLD LV
Sbjct: 51 EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLV 91
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 32.2 bits (74), Expect = 0.034
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
++LDV E L++ ++ G LD +V
Sbjct: 60 VYELDVSKEEHFKSLYNSVKKDLGSLDFIV 89
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 32.3 bits (73), Expect = 0.042
Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 30/132 (22%)
Query: 4 CKKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGN--APFGQQ 61
K + +R L + H ++ A I + F
Sbjct: 253 AKLLGFTPGELR----SYLKGATGH-----------SQGLVT--AVAIAETDSWESFFVS 295
Query: 62 AETTLATNFFALVTVCHMLFPLLRPHARVVNVASQFG------ML--YKVPSQELKQTL- 112
+ FF + C+ +P ++ + + ML + ++++ +
Sbjct: 296 VRKAITVLFF-IGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVN 354
Query: 113 -LNDSLTEDQLV 123
N L + V
Sbjct: 355 KTNSHLPAGKQV 366
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 31.8 bits (73), Expect = 0.046
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 5 KKVCKNNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
+K+C + DV+++ I L ++ GLD +V
Sbjct: 68 EKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIV 108
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 31.8 bits (73), Expect = 0.048
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
DV + S+ + + + G LD +V
Sbjct: 84 TVPCDVSDAESVDNMFKVLAEEWGSLDFVV 113
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 31.8 bits (73), Expect = 0.050
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
+ DV + I L ++ G LDI+V
Sbjct: 75 VVKCDVSLDEDIKNLKKFLEENWGSLDIIV 104
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 31.8 bits (73), Expect = 0.051
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
DV + SI + + ++ + G LD LV
Sbjct: 85 AGHCDVADAASIDAVFETLEKKWGKLDFLV 114
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A
{Burkholderia pseudomallei 1710B}
Length = 271
Score = 31.8 bits (73), Expect = 0.053
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 16 FHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
DV ++ I L ++T LD LV
Sbjct: 68 VFPCDVADDAQIDALFASLKTHWDSLDGLV 97
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.8 bits (66), Expect = 0.26
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 10/57 (17%)
Query: 11 NDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPFGQQAETTLA 67
NDN F + +V S + + ++ L L ++ G G+ T +A
Sbjct: 121 NDNQVFAKYNV----SRLQPYLKLRQ---ALLELRPAKNVLIDGVLGSGK---TWVA 167
Score = 29.4 bits (65), Expect = 0.41
Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 46/141 (32%)
Query: 1 MCNCKKVCKNNDNVRFHQLDV---LNETSIHKLHDDIQTQHGGLDIL--VNNAGIIYRGN 55
N ++ N++ + L K +++ L +L V NA N
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN------CLLVLLNVQNAKAW---N 260
Query: 56 APFGQQAETTLATNFFALVTVCHMLFPLLRPHARVVNVASQF-GMLYKVPSQELKQTLLN 114
A F + L+T R V S + +
Sbjct: 261 A-FNLSCKI--------LLT------------TRFKQVTDFLSAATTTHISLDH----HS 295
Query: 115 DSLTEDQLVGMMHDYVKLAKY 135
+LT D++ + L KY
Sbjct: 296 MTLTPDEVKSL------LLKY 310
Score = 27.5 bits (60), Expect = 1.8
Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 22/119 (18%)
Query: 26 SIHKLHDDIQTQ-------HGGLDILVNNAGIIYRGNAPFGQQAETTLAT-NFFALVTVC 77
SI ++ +++ + H +V++ Y F +F
Sbjct: 427 SIPSIYLELKVKLENEYALH---RSIVDH----YNIPKTFDSDDLIPPYLDQYFYSHIGH 479
Query: 78 HMLFPLLRPHARVVNVASQFGMLYKVPSQELKQTLLNDSLTEDQLVGMMHDYVKLAKYR 136
H+ + + F M++ + + L+Q + +DS + +++ +L Y+
Sbjct: 480 HL------KNIEHPERMTLFRMVF-LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu
P.falciparum; HET: NAD FT1; 1.96A {Plasmodium
falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A*
3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A*
2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A*
2foi_A* ...
Length = 329
Score = 28.3 bits (63), Expect = 0.67
Identities = 6/34 (17%), Positives = 18/34 (52%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILV 45
+ + ++L +I + + I ++G +++LV
Sbjct: 85 ETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLV 118
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl
reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica
napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Length = 297
Score = 25.8 bits (57), Expect = 5.0
Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 16/90 (17%)
Query: 12 DNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAPF--GQQAETTLATN 69
D + + ++ + + ++ G +DILV++ N P ET+
Sbjct: 91 DVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSL-----ANGPEVSKPLLETS-RKG 144
Query: 70 F--------FALVTVCHMLFPLLRPHARVV 91
+ ++ V++ P++ P +
Sbjct: 145 YLAAISASSYSFVSLLSHFLPIMNPGGASI 174
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 24.4 bits (54), Expect = 5.4
Identities = 4/29 (13%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 102 KVPSQELKQTL--LNDSLTEDQLVGMMHD 128
K+ E ++ + T++ +V +
Sbjct: 17 KLSLDEFREVALAFSPYFTQEDIVKFFEE 45
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3-
hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A
{Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Length = 317
Score = 25.8 bits (57), Expect = 5.7
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 10 NNDNVRFHQLDVLNETSIHKLHDDIQTQHGGLDILVNNAGII 51
+ ++F LDV N I + + +D + + AGI+
Sbjct: 37 DTGGIKFITLDVSNRDEIDRA-----VEKYSIDAIFHLAGIL 73
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P
reductase, oxidoreductase; 2.60A {Eimeria tenella}
Length = 319
Score = 25.6 bits (56), Expect = 7.3
Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 16/84 (19%)
Query: 18 QLDVLNETSIHKLHDDIQTQHGGLDILVNNAGIIYRGNAP--FGQQAETTLATNF----- 70
+ + +I ++ + ++ G +DILV++ N P +T+ +
Sbjct: 111 RYAGVGGFTISEVAEAVRADVGQIDILVHSL-----ANGPEVTKPLLQTSRK-GYLAAVS 164
Query: 71 ---FALVTVCHMLFPLLRPHARVV 91
++ V++ PL++ +
Sbjct: 165 SSSYSFVSLLQHFLPLMKEGGSAL 188
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.137 0.411
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,930,248
Number of extensions: 98516
Number of successful extensions: 571
Number of sequences better than 10.0: 1
Number of HSP's gapped: 519
Number of HSP's successfully gapped: 209
Length of query: 136
Length of database: 6,701,793
Length adjustment: 84
Effective length of query: 52
Effective length of database: 4,356,429
Effective search space: 226534308
Effective search space used: 226534308
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (23.6 bits)