Your job contains 1 sequence.
>psy16159
QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA
MKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNK
IIDQVLGEIGIEISGKMANAPTVSGKVGEGSKSSSKTQVPSDAEIEAQLARLLGS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16159
(175 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035589 - symbol:CHMP2B "Charged multivesicular bo... 413 1.3e-38 1
UNIPROTKB|F1NR65 - symbol:CHMP2B "Charged multivesicular ... 402 1.9e-37 1
UNIPROTKB|Q5F3A2 - symbol:CHMP2B "Charged multivesicular ... 402 1.9e-37 1
UNIPROTKB|Q3SX42 - symbol:CHMP2B "Charged multivesicular ... 402 1.9e-37 1
UNIPROTKB|E2R417 - symbol:CHMP2B "Uncharacterized protein... 402 1.9e-37 1
UNIPROTKB|Q9UQN3 - symbol:CHMP2B "Charged multivesicular ... 402 1.9e-37 1
UNIPROTKB|F2Z5Q1 - symbol:CHMP2B "Uncharacterized protein... 402 1.9e-37 1
MGI|MGI:1916192 - symbol:Chmp2b "charged multivesicular b... 402 1.9e-37 1
ZFIN|ZDB-GENE-070628-3 - symbol:chmp2ba "chromatin modify... 385 1.2e-35 1
ZFIN|ZDB-GENE-040426-2539 - symbol:chmp2bb "chromatin mod... 383 1.9e-35 1
WB|WBGene00007216 - symbol:C01A2.4 species:6239 "Caenorha... 310 1.0e-27 1
ZFIN|ZDB-GENE-040426-2922 - symbol:bc2 "putative breast a... 253 1.1e-21 1
TAIR|locus:2054612 - symbol:VPS2.1 species:3702 "Arabidop... 252 1.5e-21 1
UNIPROTKB|Q3T0U5 - symbol:CHMP2A "Chromatin modifying pro... 248 3.9e-21 1
UNIPROTKB|E2RIU2 - symbol:CHMP2A "Uncharacterized protein... 247 4.9e-21 1
DICTYBASE|DDB_G0292400 - symbol:vps2B "SNF7 family protei... 244 1.0e-20 1
FB|FBgn0039402 - symbol:vps2 "vps2" species:7227 "Drosoph... 242 1.7e-20 1
UNIPROTKB|O43633 - symbol:CHMP2A "Charged multivesicular ... 242 1.7e-20 1
MGI|MGI:1916203 - symbol:Chmp2a "charged multivesicular b... 242 1.7e-20 1
RGD|1305050 - symbol:Chmp2a "charged multivesicular body ... 242 1.7e-20 1
UNIPROTKB|Q5ZHN1 - symbol:CHMP2A "Charged multivesicular ... 240 2.7e-20 1
TAIR|locus:2024107 - symbol:VPS2.3 "vacuolar protein sort... 235 9.2e-20 1
UNIPROTKB|C9J0A7 - symbol:CHMP2B "Charged multivesicular ... 229 4.0e-19 1
TAIR|locus:2163396 - symbol:VPS2.2 species:3702 "Arabidop... 229 4.0e-19 1
RGD|1306781 - symbol:Chmp2b "charged multivesicular body ... 225 1.1e-18 1
UNIPROTKB|I3LSS2 - symbol:CHMP2A "Uncharacterized protein... 217 7.5e-18 1
POMBASE|SPAC4F8.01 - symbol:did4 "ESCRT III complex subun... 212 2.5e-17 1
WB|WBGene00012903 - symbol:vps-2 species:6239 "Caenorhabd... 209 5.3e-17 1
TAIR|locus:2172686 - symbol:VPS24.1 species:3702 "Arabido... 206 1.1e-16 1
FB|FBgn0037231 - symbol:vps24 "Charged multivesicular bod... 200 4.7e-16 1
UNIPROTKB|E1C230 - symbol:VPS24 "Uncharacterized protein"... 195 1.6e-15 1
ZFIN|ZDB-GENE-040426-2600 - symbol:chmp3 "charged multive... 193 2.6e-15 1
ASPGD|ASPL0000001940 - symbol:AN6898 species:162425 "Emer... 190 5.4e-15 1
CGD|CAL0003689 - symbol:VPS2 species:5476 "Candida albica... 189 6.9e-15 1
UNIPROTKB|Q5A501 - symbol:VPS2 "Putative uncharacterized ... 189 6.9e-15 1
SGD|S000001485 - symbol:DID4 "Class E Vps protein of the ... 187 1.1e-14 1
WB|WBGene00020866 - symbol:T27F7.1 species:6239 "Caenorha... 184 2.3e-14 1
UNIPROTKB|Q9Y3E7 - symbol:CHMP3 "Charged multivesicular b... 182 3.8e-14 1
TAIR|locus:2075924 - symbol:VPS24.2 species:3702 "Arabido... 180 6.2e-14 1
UNIPROTKB|Q58CS7 - symbol:CHMP3 "Charged multivesicular b... 177 1.3e-13 1
UNIPROTKB|F1SVC7 - symbol:CHMP3 "Uncharacterized protein"... 177 1.3e-13 1
UNIPROTKB|I3LFQ9 - symbol:CHMP3 "Uncharacterized protein"... 177 1.3e-13 1
MGI|MGI:1913950 - symbol:Chmp3 "charged multivesicular bo... 177 1.3e-13 1
RGD|708556 - symbol:Chmp3 "charged multivesicular body pr... 177 1.3e-13 1
UNIPROTKB|E2RDX0 - symbol:CHMP3 "Uncharacterized protein"... 178 1.5e-13 1
DICTYBASE|DDB_G0284769 - symbol:vps24 "SNF7 family protei... 168 1.2e-12 1
ASPGD|ASPL0000002845 - symbol:vps24 species:162425 "Emeri... 158 1.3e-11 1
SGD|S000001524 - symbol:VPS24 "Subunit of the ESCRT-III c... 153 4.5e-11 1
DICTYBASE|DDB_G0290087 - symbol:vps2A "SNF7 family protei... 151 7.4e-11 1
UNIPROTKB|H9L0W3 - symbol:CHMP2A "Charged multivesicular ... 133 5.9e-09 1
UNIPROTKB|G4MKS3 - symbol:MGG_06670 "Charged multivesicul... 126 6.2e-08 1
TAIR|locus:2007883 - symbol:VPS46.1 "vacuolar protein sor... 117 7.8e-07 1
POMBASE|SPAC9E9.14 - symbol:vps24 "ESCRT III complex subu... 117 1.3e-06 1
TAIR|locus:2032607 - symbol:VPS46.2 species:3702 "Arabido... 112 1.4e-05 1
DICTYBASE|DDB_G0267394 - symbol:vps46 "SNF7 family protei... 110 2.3e-05 1
UNIPROTKB|F1NVQ6 - symbol:CHMP1B "Charged multivesicular ... 103 0.00033 1
UNIPROTKB|Q7LBR1 - symbol:CHMP1B "Charged multivesicular ... 102 0.00045 1
MGI|MGI:1914314 - symbol:Chmp1b "charged multivesicular b... 102 0.00045 1
UNIPROTKB|Q5ZKX1 - symbol:CHMP1B "Charged multivesicular ... 101 0.00065 1
RGD|1593500 - symbol:Chmp1b "charged multivesicular body ... 102 0.00069 1
UNIPROTKB|Q5E994 - symbol:CHMP1B "Charged multivesicular ... 100 0.00088 1
>FB|FBgn0035589 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
EMBL:AE014296 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
eggNOG:NOG268821 KO:K12192 OMA:DPQKTLK EMBL:AY061433
RefSeq:NP_647947.1 UniGene:Dm.850 SMR:Q9VRJ5 STRING:Q9VRJ5
EnsemblMetazoa:FBtr0077166 GeneID:38599 KEGG:dme:Dmel_CG4618
UCSC:CG4618-RA FlyBase:FBgn0035589 InParanoid:Q9VRJ5
OrthoDB:EOG4MPG6C GenomeRNAi:38599 NextBio:809457 Uniprot:Q9VRJ5
Length = 212
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 81/140 (57%), Positives = 106/140 (75%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEI++ A G+ A ILAKQL++IRKQK+RTYAA GK+ SIG QNK MG+NI ++EAM
Sbjct: 45 ELEIRRNAAAGNNDACRILAKQLVEIRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAM 104
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM MN +M+PE I + ++FQ +M MTDEMI++ LDDML S DE+ESN +
Sbjct: 105 GTTAKTMGEMNKVMRPEAIGETVRQFQAANMKMEMTDEMINDTLDDMLNESGDEEESNAV 164
Query: 122 IDQVLGEIGIEISGKMANAP 141
+++VL EIGIEISGKM++ P
Sbjct: 165 VNKVLDEIGIEISGKMSSIP 184
>UNIPROTKB|F1NR65 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005739 GO:GO:0005634 GO:GO:0015031
GeneTree:ENSGT00550000074737 OMA:DPQKTLK IPI:IPI00591923
EMBL:AADN02042324 Ensembl:ENSGALT00000024990 Uniprot:F1NR65
Length = 214
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+Q+RKQK RTYA KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ + SD+E+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ T SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARGLPSASTSKASTI--SDEEIERQLKAL 211
>UNIPROTKB|Q5F3A2 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628 KO:K12192
OrthoDB:EOG469QW1 EMBL:AJ851748 IPI:IPI00591923
RefSeq:NP_001025963.1 UniGene:Gga.9706 ProteinModelPortal:Q5F3A2
STRING:Q5F3A2 GeneID:418461 KEGG:gga:418461 InParanoid:Q5F3A2
NextBio:20821640 Uniprot:Q5F3A2
Length = 214
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+Q+RKQK RTYA KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ + SD+E+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ T SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARGLPSASTSKASTI--SDEEIERQLKAL 211
>UNIPROTKB|Q3SX42 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 EMBL:BC104514 IPI:IPI00696266
RefSeq:NP_001030549.1 UniGene:Bt.19768 ProteinModelPortal:Q3SX42
STRING:Q3SX42 Ensembl:ENSBTAT00000010436 GeneID:615954
KEGG:bta:615954 CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628
InParanoid:Q3SX42 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
NextBio:20899880 Uniprot:Q3SX42
Length = 213
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+ +RKQKTRT+A KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARSLPSASTSKSTI---SDEEIERQLKAL 210
>UNIPROTKB|E2R417 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
KO:K12192 OMA:DPQKTLK EMBL:AAEX03016386 EMBL:AAEX03016387
RefSeq:XP_544799.3 ProteinModelPortal:E2R417 SMR:E2R417
Ensembl:ENSCAFT00000012434 GeneID:487675 KEGG:cfa:487675
NextBio:20861232 Uniprot:E2R417
Length = 213
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+ +RKQKTRT+A KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATI---SDEEIERQLKAL 210
>UNIPROTKB|Q9UQN3 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0008219 "cell death" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0005829 "cytosol" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0016197 "endosomal transport" evidence=TAS] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0031902
GO:GO:0015031 GO:GO:0008219 GO:GO:0016197 Orphanet:803
GO:GO:0016044 HOGENOM:HOG000177218 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK EMBL:AF151842
EMBL:AL080122 EMBL:AK296072 EMBL:CR533456 EMBL:AK222654
EMBL:AC123511 EMBL:AC130885 EMBL:BC001553 IPI:IPI00550181
PIR:T12468 RefSeq:NP_001231573.1 RefSeq:NP_054762.2
UniGene:Hs.476930 PDB:2JQK PDBsum:2JQK ProteinModelPortal:Q9UQN3
SMR:Q9UQN3 IntAct:Q9UQN3 MINT:MINT-1430090 STRING:Q9UQN3
PhosphoSite:Q9UQN3 DMDM:73917746 PaxDb:Q9UQN3 PRIDE:Q9UQN3
DNASU:25978 Ensembl:ENST00000263780 Ensembl:ENST00000471660
GeneID:25978 KEGG:hsa:25978 UCSC:uc003dqp.4 GeneCards:GC03P087360
HGNC:HGNC:24537 HPA:HPA035069 MIM:600795 MIM:609512 MIM:614696
neXtProt:NX_Q9UQN3 Orphanet:275864 PharmGKB:PA142672112
InParanoid:Q9UQN3 PhylomeDB:Q9UQN3 ChiTaRS:CHMP2B
EvolutionaryTrace:Q9UQN3 GenomeRNAi:25978 NextBio:47630
ArrayExpress:Q9UQN3 Bgee:Q9UQN3 CleanEx:HS_CHMP2B
Genevestigator:Q9UQN3 GermOnline:ENSG00000083937 Uniprot:Q9UQN3
Length = 213
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+ +RKQKTRT+A KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATI---SDEEIERQLKAL 210
>UNIPROTKB|F2Z5Q1 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739 GO:GO:0005634
GO:GO:0015031 GeneTree:ENSGT00550000074737 OMA:DPQKTLK
EMBL:CU633644 ProteinModelPortal:F2Z5Q1 SMR:F2Z5Q1
Ensembl:ENSSSCT00000013128 Uniprot:F2Z5Q1
Length = 213
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+ +RKQKTRT+A KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATI---SDEEIERQLKAL 210
>MGI|MGI:1916192 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=ISO] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1916192 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
ChiTaRS:CHMP2B EMBL:AK004506 EMBL:AK084111 EMBL:BC042626
EMBL:BC055809 IPI:IPI00222386 RefSeq:NP_081155.1 UniGene:Mm.432944
ProteinModelPortal:Q8BJF9 SMR:Q8BJF9 STRING:Q8BJF9
PhosphoSite:Q8BJF9 PaxDb:Q8BJF9 PRIDE:Q8BJF9
Ensembl:ENSMUST00000004965 GeneID:68942 KEGG:mmu:68942
UCSC:uc007zqj.1 InParanoid:Q8BJF9 NextBio:328237 Bgee:Q8BJF9
CleanEx:MM_CHMP2B Genevestigator:Q8BJF9
GermOnline:ENSMUSG00000004843 Uniprot:Q8BJF9
Length = 213
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/171 (50%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+ +RKQKTRT+A KV S+ Q K M S +KMA AM
Sbjct: 43 ELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I
Sbjct: 103 STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA AP+ SD EIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATI---SDEEIERQLKAL 210
>ZFIN|ZDB-GENE-070628-3 [details] [associations]
symbol:chmp2ba "chromatin modifying protein 2Ba"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-070628-3 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 GeneTree:ENSGT00550000074737
HOVERGEN:HBG102628 KO:K12192 OrthoDB:EOG469QW1 EMBL:CR361551
IPI:IPI00509438 RefSeq:NP_001116769.1 UniGene:Dr.144266
Ensembl:ENSDART00000055866 GeneID:569532 KEGG:dre:569532
OMA:SADEEEC NextBio:20889725 Uniprot:B0UXH0
Length = 216
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 82/171 (47%), Positives = 108/171 (63%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
E+EIKK AK G++ A ILAKQL+Q+RKQK RTYA KV S+ Q K M S +KMA AM
Sbjct: 43 EMEIKKMAKTGNREACKILAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAM 102
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
TA TM+ +N M P++ + Q+FQ+ +M MT++M++ LD++ + S DE+E I
Sbjct: 103 STTAKTMQTVNKRMDPKKTLQTMQDFQKENMKMGMTEDMLNSTLDEIFDESADEEECQDI 162
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKM AP+ T SDAEIE QL L
Sbjct: 163 VNQVLDEIGIEISGKMVRAPSTGKILPGASPAKSKTATISDAEIERQLKAL 213
>ZFIN|ZDB-GENE-040426-2539 [details] [associations]
symbol:chmp2bb "chromatin modifying protein 2Bb"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2539
GO:GO:0015031 GeneTree:ENSGT00550000074737 EMBL:CR762462
IPI:IPI00493945 Ensembl:ENSDART00000125682 ArrayExpress:F1QLN0
Bgee:F1QLN0 Uniprot:F1QLN0
Length = 263
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 82/171 (47%), Positives = 110/171 (64%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
E+EIKK AK G++ A +LAKQL+Q+RKQKTRTYA KV S+ Q K M S +KMA AM
Sbjct: 92 EMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAM 151
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
T TM+ +N M P++ + Q FQ+ +M+MT+EM+++ LD++ E S DE+ES I
Sbjct: 152 ATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDI 211
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++QVL EIGIEISGKMA+AP+ SD +IE QL L
Sbjct: 212 VNQVLDEIGIEISGKMAHAPSAARKTPSAATAKADGI--SDEDIERQLKAL 260
>WB|WBGene00007216 [details] [associations]
symbol:C01A2.4 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 KO:K12192 EMBL:Z81029 PIR:T18795
RefSeq:NP_493357.2 ProteinModelPortal:O02208 SMR:O02208
IntAct:O02208 STRING:O02208 PaxDb:O02208 EnsemblMetazoa:C01A2.4.1
EnsemblMetazoa:C01A2.4.2 GeneID:182050 KEGG:cel:CELE_C01A2.4
UCSC:C01A2.4 CTD:182050 WormBase:C01A2.4 InParanoid:O02208
OMA:EVERNRT NextBio:916198 Uniprot:O02208
Length = 207
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 71/172 (41%), Positives = 101/172 (58%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
E EIKK A +G AA LAKQL+Q+R QKT++ ++ + QN M S KM AM
Sbjct: 42 EQEIKKLAAKGHNDAARHLAKQLVQLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAM 101
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
T TMK MN+ M E++AA+ +EFQ +M +T+EM+++ LD +L+ D E + I
Sbjct: 102 GTTVKTMKAMNAQMPLEKVAANMREFQMAQEKMGLTEEMMNDTLDSILDAPGDADEQDAI 161
Query: 122 IDQVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAE-IEAQLARL 172
++QVL EIGIE++ K+AN P P+D + +EAQLARL
Sbjct: 162 VNQVLDEIGIEMNSKLANVPALPTKVSSTA--------PADFDDLEAQLARL 205
>ZFIN|ZDB-GENE-040426-2922 [details] [associations]
symbol:bc2 "putative breast adenocarcinoma marker"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-2922 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191
OrthoDB:EOG4HMJBJ EMBL:BC045320 IPI:IPI00492134 RefSeq:NP_998682.1
UniGene:Dr.75361 ProteinModelPortal:Q7ZW25 STRING:Q7ZW25
PRIDE:Q7ZW25 GeneID:798901 KEGG:dre:798901 InParanoid:Q7ZW25
NextBio:20933600 ArrayExpress:Q7ZW25 Uniprot:Q7ZW25
Length = 220
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 54/172 (31%), Positives = 94/172 (54%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AK+G A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK
Sbjct: 46 DIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN +K QI EF++ M+M +EM+++A+DD + DDE+ES+ ++
Sbjct: 106 VTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVS 165
Query: 124 QVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQ---VPSDAEIEAQLARL 172
QVL E+G+ +S +++N P Q +DA++E +L L
Sbjct: 166 QVLDELGLTLSDELSNLPATGGSLSVAAGKKAEPQPTLADADADLEERLNNL 217
>TAIR|locus:2054612 [details] [associations]
symbol:VPS2.1 species:3702 "Arabidopsis thaliana"
[GO:0015031 "protein transport" evidence=IEA;IMP] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005771 "multivesicular body" evidence=IDA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0005771 GO:GO:0000815
eggNOG:COG5491 KO:K12191 OMA:MEWLFGK EMBL:AC006420 EMBL:AY090953
EMBL:AY088685 EMBL:AJ628449 EMBL:AJ628450 EMBL:AJ628451
EMBL:AJ628452 EMBL:AJ628453 EMBL:AJ628454 EMBL:AJ628455
EMBL:AJ628456 EMBL:AJ628457 EMBL:AJ628458 EMBL:AJ628459
EMBL:AJ628460 EMBL:AJ628461 EMBL:AJ628462 EMBL:AJ628463
EMBL:AJ628464 EMBL:AJ628465 EMBL:AJ628466 EMBL:AJ628467
EMBL:AJ628468 EMBL:AJ628469 EMBL:AJ628470 EMBL:AJ628471
EMBL:AJ628472 EMBL:AJ628473 EMBL:AJ628474 EMBL:AJ628475
EMBL:AJ628476 EMBL:AJ628477 EMBL:AJ628478 EMBL:AJ628479
EMBL:AJ628480 EMBL:AJ628481 EMBL:AJ628482 EMBL:AJ628483
EMBL:AJ628484 EMBL:AJ628485 EMBL:AJ628486 EMBL:AJ628487
EMBL:AJ628488 EMBL:AJ628489 EMBL:AJ628490 EMBL:AJ628491
EMBL:AJ628492 EMBL:AJ628493 EMBL:AJ628494 EMBL:AJ628495
EMBL:AJ628496 EMBL:AJ628497 EMBL:AJ628498 EMBL:AJ628499
EMBL:AJ628500 EMBL:AJ628501 EMBL:AJ628502 EMBL:AJ628503
EMBL:AJ628504 EMBL:AJ628505 EMBL:AJ628506 EMBL:AJ628507
EMBL:AJ628508 EMBL:AJ628509 EMBL:AJ628510 EMBL:AJ628511
EMBL:AJ628512 EMBL:AJ628513 EMBL:AJ628514 EMBL:AJ628515
EMBL:AJ628516 EMBL:AJ628517 EMBL:AJ628518 EMBL:AJ628519
EMBL:AJ628520 EMBL:AJ628521 EMBL:AJ628522 EMBL:AJ628523
EMBL:AJ628524 EMBL:AJ628525 EMBL:AJ628526 EMBL:AJ628527
EMBL:AJ628528 EMBL:AJ628529 EMBL:AJ628530 EMBL:AJ628531
EMBL:AJ628532 EMBL:AJ628533 EMBL:AJ628534 EMBL:AJ628535
EMBL:AJ628536 EMBL:AJ628537 EMBL:AJ628538 EMBL:AJ628539
EMBL:AJ628540 EMBL:AJ628541 EMBL:AJ628542 EMBL:AJ628543
EMBL:AJ628544 EMBL:AJ628545 EMBL:AJ628546 IPI:IPI00528753
PIR:D84478 RefSeq:NP_565336.1 UniGene:At.20774
ProteinModelPortal:Q9SKI2 SMR:Q9SKI2 IntAct:Q9SKI2 STRING:Q9SKI2
PaxDb:Q9SKI2 PRIDE:Q9SKI2 EnsemblPlants:AT2G06530.1 GeneID:815211
KEGG:ath:AT2G06530 TAIR:At2g06530 InParanoid:Q9SKI2
PhylomeDB:Q9SKI2 ProtClustDB:CLSN2688018 Genevestigator:Q9SKI2
Uniprot:Q9SKI2
Length = 225
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 51/139 (36%), Positives = 83/139 (59%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
EIKK AK+G A ++AK LI+ R Q + Y + ++ + ++ +T+ S M EAMK
Sbjct: 47 EIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKG 106
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN M + QEF++ +M M E++ +A+DD LEG ++E+E+ ++
Sbjct: 107 VTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVS 166
Query: 124 QVLGEIGIEISGKMANAPT 142
QVL EIGI+I+ ++ NAP+
Sbjct: 167 QVLDEIGIDINQELVNAPS 185
>UNIPROTKB|Q3T0U5 [details] [associations]
symbol:CHMP2A "Chromatin modifying protein 2A" species:9913
"Bos taurus" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK GeneTree:ENSGT00550000074737 EMBL:DAAA02047921
EMBL:BC102258 IPI:IPI00705335 RefSeq:NP_001029722.1 UniGene:Bt.5624
STRING:Q3T0U5 Ensembl:ENSBTAT00000018429 GeneID:523847
KEGG:bta:523847 InParanoid:Q3T0U5 NextBio:20873841 Uniprot:Q3T0U5
Length = 222
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 53/174 (30%), Positives = 95/174 (54%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AK+G A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK
Sbjct: 46 DIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN +K QI EF++ M+M +EM+++A+DD + DDE+ES+ ++
Sbjct: 106 VTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVA 165
Query: 124 QVLGEIGIEISGKMANAPTXXXXXXXXXX-----XXXXTQVPSDAEIEAQLARL 172
QVL E+G+ ++ +++N P+ V +DA++E +L L
Sbjct: 166 QVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALVDADADLEERLKNL 219
>UNIPROTKB|E2RIU2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 CTD:27243 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AAEX03000690 RefSeq:XP_850536.1
ProteinModelPortal:E2RIU2 Ensembl:ENSCAFT00000003684 GeneID:476364
KEGG:cfa:476364 NextBio:20852037 Uniprot:E2RIU2
Length = 222
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/174 (29%), Positives = 95/174 (54%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AK+G A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK
Sbjct: 46 DIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN +K QI EF++ M+M +EM+++A+DD + +DE+ES+ ++
Sbjct: 106 VTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVS 165
Query: 124 QVLGEIGIEISGKMANAPTXXXXXXXXXX-----XXXXTQVPSDAEIEAQLARL 172
QVL E+G+ ++ +++N P+ V +DA++E +L L
Sbjct: 166 QVLDELGLSLTDELSNLPSTGGSLSVAASGKKAEAAASALVDADADLEERLKNL 219
>DICTYBASE|DDB_G0292400 [details] [associations]
symbol:vps2B "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0292400 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0010008 EMBL:AAFI02000190 eggNOG:COG5491 KO:K12191
OMA:MEWLFGK RefSeq:XP_629585.1 ProteinModelPortal:Q54DB1
STRING:Q54DB1 EnsemblProtists:DDB0234176 GeneID:8628645
KEGG:ddi:DDB_G0292400 ProtClustDB:CLSZ2429397 Uniprot:Q54DB1
Length = 198
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 49/140 (35%), Positives = 87/140 (62%)
Query: 3 LEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMK 62
L+IKK AK+G +A I+AK L++ R + Y + ++ ++ ++ +T+ S MAEAMK
Sbjct: 44 LDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMK 103
Query: 63 NTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKII 122
M MN M Q EF+Q +M+M +EM+++ +D ++E +E++S +I+
Sbjct: 104 GVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEIL 163
Query: 123 DQVLGEIGIEISGKMANAPT 142
+QVL EIGI+++ ++ +APT
Sbjct: 164 NQVLDEIGIDLASQLVDAPT 183
>FB|FBgn0039402 [details] [associations]
symbol:vps2 "vps2" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014297 GO:GO:0015031 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 FlyBase:FBgn0039402 EMBL:BT003747
RefSeq:NP_651455.1 UniGene:Dm.10330 SMR:Q9VBI3 IntAct:Q9VBI3
MINT:MINT-1674416 STRING:Q9VBI3 EnsemblMetazoa:FBtr0084967
GeneID:43164 KEGG:dme:Dmel_CG14542 UCSC:CG14542-RA CTD:43164
InParanoid:Q9VBI3 GenomeRNAi:43164 NextBio:832507 Uniprot:Q9VBI3
Length = 256
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 46/139 (33%), Positives = 85/139 (61%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AKEG A I+AK L++ R+ + + + ++ ++ +T+ S MA+AMK
Sbjct: 46 DIKKMAKEGQMDAVKIMAKDLVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M+NMN + QI Q+F++ M+M +EMI++A+DD +E DE+E++ ++
Sbjct: 106 VTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVS 165
Query: 124 QVLGEIGIEISGKMANAPT 142
QVL E+G+++ ++ + P+
Sbjct: 166 QVLDELGLQLGEQLGDLPS 184
>UNIPROTKB|O43633 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0016197 GO:GO:0016044
EMBL:CH471135 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ EMBL:AF042384
EMBL:AJ277113 EMBL:AY364248 EMBL:BT007298 EMBL:CR457002
EMBL:AK311974 EMBL:BC002502 IPI:IPI00004416 RefSeq:NP_055268.1
RefSeq:NP_940818.1 UniGene:Hs.12107 ProteinModelPortal:O43633
SMR:O43633 DIP:DIP-48533N IntAct:O43633 MINT:MINT-5005843
STRING:O43633 PhosphoSite:O43633 OGP:O43633 PaxDb:O43633
PeptideAtlas:O43633 PRIDE:O43633 DNASU:27243
Ensembl:ENST00000312547 GeneID:27243 KEGG:hsa:27243 UCSC:uc002qti.3
GeneCards:GC19M059062 HGNC:HGNC:30216 HPA:HPA041153 HPA:HPA042031
MIM:610893 neXtProt:NX_O43633 PharmGKB:PA142672111
InParanoid:O43633 OMA:MEWLFGK PhylomeDB:O43633 ChiTaRS:CHMP2A
GenomeRNAi:27243 NextBio:50143 Bgee:O43633 CleanEx:HS_CHMP2A
Genevestigator:O43633 GermOnline:ENSG00000130724 Uniprot:O43633
Length = 222
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 52/174 (29%), Positives = 94/174 (54%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AK+G A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK
Sbjct: 46 DIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN +K QI EF++ M+M +EM+++A+DD + +DE+ES+ ++
Sbjct: 106 VTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVS 165
Query: 124 QVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPS-----DAEIEAQLARL 172
QVL E+G+ ++ +++N P+ S DA++E +L L
Sbjct: 166 QVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAAASALADADADLEERLKNL 219
>MGI|MGI:1916203 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1916203 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK EMBL:AK005267 EMBL:BC012230 IPI:IPI00119020
RefSeq:NP_081161.1 UniGene:Mm.295670 ProteinModelPortal:Q9DB34
SMR:Q9DB34 STRING:Q9DB34 PaxDb:Q9DB34 PRIDE:Q9DB34
Ensembl:ENSMUST00000005711 GeneID:68953 KEGG:mmu:68953
UCSC:uc009ffc.2 GeneTree:ENSGT00550000074737 InParanoid:Q9DB34
NextBio:328271 Bgee:Q9DB34 CleanEx:MM_CHMP2A Genevestigator:Q9DB34
GermOnline:ENSMUSG00000033916 Uniprot:Q9DB34
Length = 222
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 52/174 (29%), Positives = 94/174 (54%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AK+G A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK
Sbjct: 46 DIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN +K QI EF++ M+M +EM+++A+DD + +DE+ES+ ++
Sbjct: 106 VTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVS 165
Query: 124 QVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPS-----DAEIEAQLARL 172
QVL E+G+ ++ +++N P+ S DA++E +L L
Sbjct: 166 QVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADADADLEERLKNL 219
>RGD|1305050 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1305050 GO:GO:0005829
GO:GO:0015031 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
GeneTree:ENSGT00550000074737 EMBL:BC167093 EMBL:CH474090
IPI:IPI00360875 RefSeq:NP_001102376.1 UniGene:Rn.203178 SMR:B2RZB5
STRING:B2RZB5 Ensembl:ENSRNOT00000030931 GeneID:365191
KEGG:rno:365191 UCSC:RGD:1305050 NextBio:686824
Genevestigator:B2RZB5 Uniprot:B2RZB5
Length = 222
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 52/174 (29%), Positives = 94/174 (54%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK AK+G A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK
Sbjct: 46 DIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN +K QI EF++ M+M +EM+++A+DD + +DE+ES+ ++
Sbjct: 106 VTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVS 165
Query: 124 QVLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPS-----DAEIEAQLARL 172
QVL E+G+ ++ +++N P+ S DA++E +L L
Sbjct: 166 QVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADADADLEERLKNL 219
>UNIPROTKB|Q5ZHN1 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 EMBL:AJ721103 IPI:IPI00594797 RefSeq:NP_001074361.1
UniGene:Gga.7026 ProteinModelPortal:Q5ZHN1 STRING:Q5ZHN1
PRIDE:Q5ZHN1 GeneID:776036 KEGG:gga:776036 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 InParanoid:Q5ZHN1 KO:K12191
OrthoDB:EOG4HMJBJ NextBio:20922661 Uniprot:Q5ZHN1
Length = 220
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 52/173 (30%), Positives = 92/173 (53%)
Query: 3 LEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMK 62
++IKK AK+G A I+AK L++ R+ + + V ++ ++ +T+ SN MA AMK
Sbjct: 45 IDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMK 104
Query: 63 NTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKII 122
M MN +K QI EF++ M+M +E++++A+DD + DDE+ES+ ++
Sbjct: 105 GVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVV 164
Query: 123 DQVLGEIGIEISGKMANAPT---XXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
QVL E+G+ ++ ++A P +DA++E +L L
Sbjct: 165 SQVLDELGLNLTDELATLPPPGGSLAAGEGRAAEAAAALADADADLEERLKNL 217
>TAIR|locus:2024107 [details] [associations]
symbol:VPS2.3 "vacuolar protein sorting-associated
protein 2.3" species:3702 "Arabidopsis thaliana" [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003027 GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12192 OMA:DPQKTLK
EMBL:AY052238 EMBL:AY060501 IPI:IPI00517467 PIR:D86170
RefSeq:NP_563696.1 UniGene:At.26425 ProteinModelPortal:Q941D5
SMR:Q941D5 IntAct:Q941D5 PRIDE:Q941D5 EnsemblPlants:AT1G03950.1
GeneID:839362 KEGG:ath:AT1G03950 TAIR:At1g03950 InParanoid:Q941D5
PhylomeDB:Q941D5 ProtClustDB:CLSN2687652 Genevestigator:Q941D5
Uniprot:Q941D5
Length = 210
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 48/139 (34%), Positives = 85/139 (61%)
Query: 3 LEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMK 62
LEIK+ AK G++ A ILA+QLI++R+Q ++ ++ I + M ++ +A M+
Sbjct: 44 LEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQ 103
Query: 63 NTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKII 122
M M+ M P + A +EFQ+ +M+MT EM+ +++DD L+ + E E+ +
Sbjct: 104 GATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLT 163
Query: 123 DQVLGEIGIEISGKMANAP 141
+QVL EIGI+I+ ++++AP
Sbjct: 164 NQVLDEIGIDIASQLSSAP 182
>UNIPROTKB|C9J0A7 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOGENOM:HOG000177218 EMBL:AC123511 EMBL:AC130885 HGNC:HGNC:24537
ChiTaRS:CHMP2B IPI:IPI00947040 ProteinModelPortal:C9J0A7
STRING:C9J0A7 PRIDE:C9J0A7 Ensembl:ENST00000494980
ArrayExpress:C9J0A7 Bgee:C9J0A7 Uniprot:C9J0A7
Length = 183
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 57/149 (38%), Positives = 80/149 (53%)
Query: 27 IRKQKTRTYAAQGKVHSIGIQN--KTMGSNIKMAEAMKN-TADTMKNMNSIMKPEQIAAS 83
+ KQ+ + K+ IG + K + + K T TM+ +N M P++ +
Sbjct: 35 LEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFATMQAVNKKMDPQKTLQT 94
Query: 84 AQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQVLGEIGIEISGKMANAPTX 143
Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I++QVL EIGIEISGKMA AP+
Sbjct: 95 MQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSA 154
Query: 144 XXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
SD EIE QL L
Sbjct: 155 ARSLPSASTSKATI---SDEEIERQLKAL 180
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/107 (36%), Positives = 57/107 (53%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
ELEIKK AK G+K A +LAKQL+ +RKQKTRT+A V NK M K + M
Sbjct: 43 ELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFATMQAV------NKKMDPQ-KTLQTM 95
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDM 108
+N +NM M E I + + G + +++++ LD++
Sbjct: 96 QNFQK--ENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI 140
>TAIR|locus:2163396 [details] [associations]
symbol:VPS2.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AB017065 EMBL:AB024024 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 EMBL:AK227410 EMBL:BT005848
IPI:IPI00548186 IPI:IPI00892046 RefSeq:NP_001119371.1
RefSeq:NP_199269.1 UniGene:At.30067 ProteinModelPortal:Q0WTY4
IntAct:Q0WTY4 STRING:Q0WTY4 PaxDb:Q0WTY4 PRIDE:Q0WTY4
EnsemblPlants:AT5G44560.1 GeneID:834483 KEGG:ath:AT5G44560
TAIR:At5g44560 InParanoid:Q0WTY4 OMA:APKGRIG PhylomeDB:Q0WTY4
ProtClustDB:CLSN2916725 Genevestigator:Q0WTY4 Uniprot:Q0WTY4
Length = 222
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 44/138 (31%), Positives = 85/138 (61%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
EIKK AK G++ A ILA+QL+++R+Q T ++ ++ + + + ++ ++ MK
Sbjct: 45 EIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKG 104
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN M P + A ++FQ+ +++MT EM+ EA+D+ L+ + E+E+ + +
Sbjct: 105 ATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTN 164
Query: 124 QVLGEIGIEISGKMANAP 141
QVL EIG+ ++ ++++AP
Sbjct: 165 QVLDEIGVGVASQLSSAP 182
>RGD|1306781 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1306781 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737
IPI:IPI00766292 Ensembl:ENSRNOT00000000904 Uniprot:F1M8B7
Length = 107
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 49/106 (46%), Positives = 65/106 (61%)
Query: 67 TMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQVL 126
TM+ +N M P++ + Q FQ+ +M MT+EMI++ LDD+ +GSDDE+ES I++QVL
Sbjct: 2 TMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVL 61
Query: 127 GEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
EIGIEISGKMA AP+ SD EIE QL L
Sbjct: 62 DEIGIEISGKMAKAPSAARSLPSASTSKATI---SDEEIERQLKAL 104
>UNIPROTKB|I3LSS2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0015031 GeneTree:ENSGT00550000074737
Ensembl:ENSSSCT00000030728 OMA:FITMRAN Uniprot:I3LSS2
Length = 167
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 46/162 (28%), Positives = 87/162 (53%)
Query: 16 AATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNTADTMKNMNSIM 75
A I+AK L++ R+ + + + ++ ++ +T+ SN MA+AMK M MN +
Sbjct: 3 AVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQL 62
Query: 76 KPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQVLGEIGIEISG 135
K QI EF++ M+M +EM+++A+DD + +DE+ES+ ++ QVL E+G+ ++
Sbjct: 63 KLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVAQVLDELGLSLTD 122
Query: 136 KMANAPTXXXXXXXXXX-----XXXXTQVPSDAEIEAQLARL 172
+++N P+ V +DA++E +L L
Sbjct: 123 ELSNLPSTGGSLSVAASGKKAEAAASALVDADADLEERLKNL 164
>POMBASE|SPAC4F8.01 [details] [associations]
symbol:did4 "ESCRT III complex subunit Did4" species:4896
"Schizosaccharomyces pombe" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC4F8.01 EMBL:CU329670
GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491 HOGENOM:HOG000177218
KO:K12191 OMA:MEWLFGK GO:GO:0006900 PIR:T38831 RefSeq:NP_593871.3
ProteinModelPortal:O14177 STRING:O14177 EnsemblFungi:SPAC4F8.01.1
GeneID:2543521 KEGG:spo:SPAC4F8.01 OrthoDB:EOG4WT0M1
NextBio:20804531 GO:GO:0045053 Uniprot:O14177
Length = 210
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/139 (33%), Positives = 86/139 (61%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
EIK +AK G+ AA I A+ L+++R + + A+ ++ +I ++ +TM ++ +M ++M+
Sbjct: 49 EIKGSAKAGNTGAARIQARDLMRLRNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRG 108
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
+ MN M +A Q+F++ M EMIDE +DD LE DDE+E++++++
Sbjct: 109 ATRLLTGMNKSMNIPAMARITQQFERENEIMEQRQEMIDENMDDALE-EDDEEEADELVN 167
Query: 124 QVLGEIGIEISGKMANAPT 142
+VL EIG+++S + +A T
Sbjct: 168 KVLDEIGVDLSQGLPDAAT 186
>WB|WBGene00012903 [details] [associations]
symbol:vps-2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0009792 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AL110485 RefSeq:NP_496717.1
ProteinModelPortal:Q9U2F6 SMR:Q9U2F6 IntAct:Q9U2F6 STRING:Q9U2F6
PaxDb:Q9U2F6 EnsemblMetazoa:Y46G5A.12.1 EnsemblMetazoa:Y46G5A.12.2
EnsemblMetazoa:Y46G5A.12.3 GeneID:174908 KEGG:cel:CELE_Y46G5A.12
UCSC:Y46G5A.12.1 CTD:174908 WormBase:Y46G5A.12 InParanoid:Q9U2F6
NextBio:885996 Uniprot:Q9U2F6
Length = 237
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 42/139 (30%), Positives = 82/139 (58%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IK AK+ + ++AK L++ R+ + + + ++ ++ +T+ S MA AMK
Sbjct: 46 DIKNMAKKNQMDSVKVMAKDLVRTRRYIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKG 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M++MN + QI EF++ M+M +E++ +A+DD L + DE+E+++I++
Sbjct: 106 VTKAMQSMNRQLNLPQIQKIMMEFEKQSEIMDMKEEVMGDAIDDALGDAGDEEETDQIVN 165
Query: 124 QVLGEIGIEISGKMANAPT 142
QVL E+GI++ +MA P+
Sbjct: 166 QVLDELGIQMGEEMAGLPS 184
>TAIR|locus:2172686 [details] [associations]
symbol:VPS24.1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AB005243
EMBL:AY054614 EMBL:AY128742 EMBL:AF083749 EMBL:AK220831
IPI:IPI00546218 RefSeq:NP_197686.1 UniGene:At.8736
ProteinModelPortal:Q9FFB3 SMR:Q9FFB3 IntAct:Q9FFB3 STRING:Q9FFB3
PaxDb:Q9FFB3 PRIDE:Q9FFB3 EnsemblPlants:AT5G22950.1 GeneID:832359
KEGG:ath:AT5G22950 TAIR:At5g22950 InParanoid:Q9FFB3 OMA:MKIVNNL
PhylomeDB:Q9FFB3 ProtClustDB:CLSN2686097 Genevestigator:Q9FFB3
Uniprot:Q9FFB3
Length = 229
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/136 (31%), Positives = 85/136 (62%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA---M 61
IK+AAK D ++A LAK+++ R+ R Y + +++SI + +G ++ +A +
Sbjct: 50 IKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMH---LGESVAIARTVGHL 106
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
+A+ MK +N++MK Q+AA+ QEF + +T+ + +E ++EA+D+ L+ D E+E ++
Sbjct: 107 SKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEE 166
Query: 122 IDQVLGEIGIEISGKM 137
+D+VL I E + ++
Sbjct: 167 VDKVLTAIAGETAAEL 182
>FB|FBgn0037231 [details] [associations]
symbol:vps24 "Charged multivesicular body protein 3"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 EMBL:AE014297
GO:GO:0006911 GO:GO:0015031 eggNOG:COG5491
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:AY058381
RefSeq:NP_649451.1 UniGene:Dm.20141 SMR:Q9VN02 IntAct:Q9VN02
MINT:MINT-896357 STRING:Q9VN02 EnsemblMetazoa:FBtr0078958
GeneID:40542 KEGG:dme:Dmel_CG9779 UCSC:CG9779-RA CTD:40542
FlyBase:FBgn0037231 InParanoid:Q9VN02 OrthoDB:EOG4Z614S
GenomeRNAi:40542 NextBio:819274 Uniprot:Q9VN02
Length = 223
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 39/137 (28%), Positives = 84/137 (61%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K+AA++ D+ ILAK+++ RK R Y ++ ++SI +Q K S +++A +++ +
Sbjct: 48 LKQAAQKNDRDTCVILAKEIVNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ ++ M S+++ ++A ++ + + + + +EM+DE +D + E + E+E++K +D+
Sbjct: 108 TEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLDETMDSLEESEELEEEASKEVDK 167
Query: 125 VLGEIGIEISGKMANAP 141
VL EI GK+ AP
Sbjct: 168 VLWEI---TDGKLGEAP 181
>UNIPROTKB|E1C230 [details] [associations]
symbol:VPS24 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK CTD:40542
EMBL:AADN02014773 IPI:IPI00579079 RefSeq:XP_420858.2
UniGene:Gga.12935 Ensembl:ENSGALT00000025484 GeneID:422918
KEGG:gga:422918 NextBio:20825474 Uniprot:E1C230
Length = 218
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 47/169 (27%), Positives = 93/169 (55%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
IK AAK+G K ILAK+LI+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 48 IKDAAKKGQKDVCVILAKELIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+E+ ID+
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMEDEEEMEEEAEMEIDK 167
Query: 125 VLGEIGIEISGKMANAPTXXXXXXXX-XXXXXXTQVPSDAEIEAQLARL 172
+L EI +G + AP+ V + +IEA +RL
Sbjct: 168 ILFEI---TAGALGKAPSKVTDALPEPEAMGAAAAVDEEEDIEAMQSRL 213
>ZFIN|ZDB-GENE-040426-2600 [details] [associations]
symbol:chmp3 "charged multivesicular body protein
3" species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2600
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:BC066696 IPI:IPI00491816 RefSeq:NP_998485.1 UniGene:Dr.48763
ProteinModelPortal:Q6NY88 SMR:Q6NY88 STRING:Q6NY88 PRIDE:Q6NY88
Ensembl:ENSDART00000055487 GeneID:406621 KEGG:dre:406621
InParanoid:Q6NY88 NextBio:20818164 Bgee:Q6NY88 Uniprot:Q6NY88
Length = 221
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 44/139 (31%), Positives = 84/139 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
IK AAK+G K ILAK++IQ ++ + YA++ +++S+ + K S +++A A++ +
Sbjct: 48 IKDAAKKGQKDVCIILAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ ++ + + + + +EM L+D LEG DDE+E + +
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRDLSKEMMKAGIIEEM----LEDTLEGMDDEEEMEEAAEA 163
Query: 125 VLGEIGIEIS-GKMANAPT 142
+ +I EI+ G + AP+
Sbjct: 164 EVDKILFEITAGALGKAPS 182
>ASPGD|ASPL0000001940 [details] [associations]
symbol:AN6898 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0015031 EMBL:BN001301 GO:GO:0000815 OMA:MEWLFGK GO:GO:0070676
EnsemblFungi:CADANIAT00007700 Uniprot:C8V2X5
Length = 226
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 42/139 (30%), Positives = 78/139 (56%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK+AK G A I AK L++ R+ + Y + ++ +I ++ +T+ SN +M ++MK
Sbjct: 49 DIKKSAKNGQIGACKIQAKDLVRTRRYIQKFYQMRTQLQAISLRIQTVRSNEQMMQSMKG 108
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
+ +MN M + A EF++ M+ EM+D+A+D+ +E+E I+
Sbjct: 109 ATMLLGSMNRQMNLPALQRIAMEFERENDIMDQRQEMMDDAIDEATGIEGEEEEGEDIVK 168
Query: 124 QVLGEIGIEISGKMANAPT 142
+VL EIG+++S + P+
Sbjct: 169 EVLDEIGVDLSQALGETPS 187
>CGD|CAL0003689 [details] [associations]
symbol:VPS2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0006623 "protein targeting to
vacuole" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689 GO:GO:0006623
EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 42/143 (29%), Positives = 85/143 (59%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK+AK G +A I AK LI+ + ++ + + ++ +I ++ +++ SN +MA +M++
Sbjct: 50 DIKKSAKSGQISSAKIQAKDLIRTKSYVSKFTSMKTQLQAISLRIQSVRSNQQMAMSMRD 109
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDE----QESN 119
+ MN M Q++ AQEF + M+ E +D+A+DD + +DE ++ +
Sbjct: 110 ATRVLGGMNRSMNLPQLSRIAQEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVD 169
Query: 120 KIIDQVLGEIGIEISGKMANAPT 142
+I+ +VL EIG++++ + + PT
Sbjct: 170 EILSKVLDEIGVDLNTTLKDTPT 192
>UNIPROTKB|Q5A501 [details] [associations]
symbol:VPS2 "Putative uncharacterized protein DID4"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689
GO:GO:0006623 EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 42/143 (29%), Positives = 85/143 (59%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IKK+AK G +A I AK LI+ + ++ + + ++ +I ++ +++ SN +MA +M++
Sbjct: 50 DIKKSAKSGQISSAKIQAKDLIRTKSYVSKFTSMKTQLQAISLRIQSVRSNQQMAMSMRD 109
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDE----QESN 119
+ MN M Q++ AQEF + M+ E +D+A+DD + +DE ++ +
Sbjct: 110 ATRVLGGMNRSMNLPQLSRIAQEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVD 169
Query: 120 KIIDQVLGEIGIEISGKMANAPT 142
+I+ +VL EIG++++ + + PT
Sbjct: 170 EILSKVLDEIGVDLNTTLKDTPT 192
>SGD|S000001485 [details] [associations]
symbol:DID4 "Class E Vps protein of the ESCRT-III complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0000815 "ESCRT III complex" evidence=IDA] [GO:0045324 "late
endosome to vacuole transport" evidence=IPI] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000001485 GO:GO:0015031
EMBL:BK006944 GO:GO:0045324 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 GO:GO:0043162 OrthoDB:EOG4WT0M1
GO:GO:0045053 EMBL:Z28002 PIR:S37812 RefSeq:NP_012924.2 PDB:2V6X
PDBsum:2V6X ProteinModelPortal:P36108 SMR:P36108 DIP:DIP-1916N
IntAct:P36108 MINT:MINT-404147 STRING:P36108 PaxDb:P36108
EnsemblFungi:YKL002W GeneID:853868 KEGG:sce:YKL002W CYGD:YKL002w
EvolutionaryTrace:P36108 NextBio:975133 Genevestigator:P36108
GermOnline:YKL002W GO:GO:0070676 Uniprot:P36108
Length = 232
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 38/139 (27%), Positives = 81/139 (58%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
EIKK+AK G AA + AK L++ R + + ++ +I ++ + + S+ +M +M
Sbjct: 49 EIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSE 108
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDML-EGSDDEQESNKII 122
+ MN M Q+ + EF++ M E +DEA+D+++ + D+++E+++I+
Sbjct: 109 ATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIV 168
Query: 123 DQVLGEIGIEISGKMANAP 141
++VL EIG++++ ++ + P
Sbjct: 169 NKVLDEIGVDLNSQLQSTP 187
>WB|WBGene00020866 [details] [associations]
symbol:T27F7.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0015031
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0019915
eggNOG:COG5491 GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
KO:K12193 OMA:MSKEMMK EMBL:FO081509 NextBio:881441
RefSeq:NP_494919.1 ProteinModelPortal:Q9GYK4 SMR:Q9GYK4
IntAct:Q9GYK4 STRING:Q9GYK4 PaxDb:Q9GYK4 EnsemblMetazoa:T27F7.1.1
EnsemblMetazoa:T27F7.1.2 EnsemblMetazoa:T27F7.1.3 GeneID:173863
KEGG:cel:CELE_T27F7.1 UCSC:T27F7.1.1 CTD:173863 WormBase:T27F7.1
InParanoid:Q9GYK4 Uniprot:Q9GYK4
Length = 208
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 39/138 (28%), Positives = 85/138 (61%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
EIK+AAK+GDK ILAK +IQ RK ++ + ++ +++S+ + + + I+MA +++
Sbjct: 45 EIKEAAKKGDKDVCLILAKSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQK 104
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
+ + MK+M ++K +I + +E + ++ + +EMI+E L+ + E + E+++ + ++
Sbjct: 105 STEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEETLESV-EPAGLEEKAQEEVE 163
Query: 124 QVLGEIGIEISGKMANAP 141
+L E+ G++ AP
Sbjct: 164 NILWEV---TQGELGKAP 178
>UNIPROTKB|Q9Y3E7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0006915 EMBL:CH471053 GO:GO:0031902 GO:GO:0015031
GO:GO:0016197 GO:GO:0007049 GO:GO:0000910 GO:GO:0005546
GO:GO:0008333 GO:GO:0030496 GO:GO:0005769 GO:GO:0051036
GO:GO:0016044 EMBL:AC064848 eggNOG:COG5491 CTD:51652
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AF219226 EMBL:AY364249 EMBL:AF151907
EMBL:AK290725 EMBL:AK294389 EMBL:AK312353 EMBL:AK315835
EMBL:AC015971 EMBL:AC068288 EMBL:BC004419 IPI:IPI00100673
IPI:IPI00478935 IPI:IPI00979305 IPI:IPI00981241
RefSeq:NP_001005753.1 RefSeq:NP_001180446.1 RefSeq:NP_001185883.1
RefSeq:NP_057163.1 UniGene:Hs.591582 PDB:2GD5 PDB:2XZE PDB:3FRT
PDB:3FRV PDBsum:2GD5 PDBsum:2XZE PDBsum:3FRT PDBsum:3FRV
ProteinModelPortal:Q9Y3E7 SMR:Q9Y3E7 DIP:DIP-48532N IntAct:Q9Y3E7
MINT:MINT-1185988 STRING:Q9Y3E7 PhosphoSite:Q9Y3E7 DMDM:73917763
PaxDb:Q9Y3E7 PRIDE:Q9Y3E7 DNASU:51652 Ensembl:ENST00000263856
Ensembl:ENST00000409225 Ensembl:ENST00000409727
Ensembl:ENST00000439940 GeneID:100526767 GeneID:51652
KEGG:hsa:100526767 KEGG:hsa:51652 UCSC:uc002srj.3 CTD:100526767
GeneCards:GC02M086730 HGNC:HGNC:29865 HPA:HPA015673 MIM:610052
neXtProt:NX_Q9Y3E7 PharmGKB:PA134920495 PhylomeDB:Q9Y3E7
ChiTaRS:CHMP3 EvolutionaryTrace:Q9Y3E7 NextBio:55614 Bgee:Q9Y3E7
CleanEx:HS_VPS24 Genevestigator:Q9Y3E7 GermOnline:ENSG00000115561
Uniprot:Q9Y3E7
Length = 222
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 38/138 (27%), Positives = 84/138 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 48 VKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+E+ ID+
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDR 167
Query: 125 VLGEIGIEISGKMANAPT 142
+L EI +G + AP+
Sbjct: 168 ILFEI---TAGALGKAPS 182
>TAIR|locus:2075924 [details] [associations]
symbol:VPS24.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0000815
"ESCRT III complex" evidence=ISS] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AL353992
IPI:IPI00548688 PIR:T48976 RefSeq:NP_190086.1 UniGene:At.53746
ProteinModelPortal:Q9LXH5 SMR:Q9LXH5 EnsemblPlants:AT3G45000.1
GeneID:823635 KEGG:ath:AT3G45000 TAIR:At3g45000 InParanoid:Q9LXH5
OMA:AFSKEMT PhylomeDB:Q9LXH5 ArrayExpress:Q9LXH5
Genevestigator:Q9LXH5 Uniprot:Q9LXH5
Length = 200
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 41/139 (29%), Positives = 78/139 (56%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN- 63
IK + K D + A LA++++ R+ R Y + +V+SI + +G +I A + N
Sbjct: 21 IKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMH---LGESIATAVTVGNL 77
Query: 64 --TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
+ + MK +NS+MK +IA + Q F + +T+ + +E + +A+D+ L+ D E+E +
Sbjct: 78 SKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEEEIEEE 137
Query: 122 IDQVLGEIGIEISGKMANA 140
+D+VL I E + ++ A
Sbjct: 138 VDKVLTAIAGETAAELPEA 156
>UNIPROTKB|Q58CS7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491
EMBL:BT021870 EMBL:BC114072 IPI:IPI00688889 RefSeq:NP_001030223.2
UniGene:Bt.28232 ProteinModelPortal:Q58CS7 SMR:Q58CS7 STRING:Q58CS7
Ensembl:ENSBTAT00000018071 GeneID:507722 KEGG:bta:507722 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 InParanoid:Q58CS7 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB NextBio:20868194 Uniprot:Q58CS7
Length = 222
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/138 (26%), Positives = 83/138 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 48 VKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+ + ID+
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDR 167
Query: 125 VLGEIGIEISGKMANAPT 142
+L EI +G + AP+
Sbjct: 168 ILFEI---TAGALGKAPS 182
>UNIPROTKB|F1SVC7 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 EMBL:CU467088
Ensembl:ENSSSCT00000009004 Uniprot:F1SVC7
Length = 217
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/138 (26%), Positives = 83/138 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 44 VKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 103
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+ + ID+
Sbjct: 104 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDK 163
Query: 125 VLGEIGIEISGKMANAPT 142
+L EI +G + AP+
Sbjct: 164 ILFEI---TAGALGKAPS 178
>UNIPROTKB|I3LFQ9 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:CU467088
RefSeq:XP_003354782.1 Ensembl:ENSSSCT00000031530 GeneID:100522249
KEGG:ssc:100522249 Uniprot:I3LFQ9
Length = 221
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/138 (26%), Positives = 83/138 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 48 VKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+ + ID+
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDK 167
Query: 125 VLGEIGIEISGKMANAPT 142
+L EI +G + AP+
Sbjct: 168 ILFEI---TAGALGKAPS 182
>MGI|MGI:1913950 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005770 "late endosome" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030496 "midbody" evidence=ISO]
[GO:0051036 "regulation of endosome size" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1913950 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:AK009414 EMBL:AK014818 EMBL:AK016677 EMBL:AK018611
EMBL:AK083562 EMBL:BC049964 IPI:IPI00347275 RefSeq:NP_080059.2
UniGene:Mm.181278 ProteinModelPortal:Q9CQ10 SMR:Q9CQ10
IntAct:Q9CQ10 STRING:Q9CQ10 PhosphoSite:Q9CQ10 PaxDb:Q9CQ10
PRIDE:Q9CQ10 Ensembl:ENSMUST00000059462 Ensembl:ENSMUST00000065364
GeneID:66700 KEGG:mmu:66700 UCSC:uc009cgw.1 InParanoid:Q9CQ10
NextBio:322405 Bgee:Q9CQ10 CleanEx:MM_VPS24 Genevestigator:Q9CQ10
GermOnline:ENSMUSG00000053119 Uniprot:Q9CQ10
Length = 224
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/138 (26%), Positives = 83/138 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 48 VKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+ + ID+
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDR 167
Query: 125 VLGEIGIEISGKMANAPT 142
+L EI +G + AP+
Sbjct: 168 ILFEI---TAGALGKAPS 182
>RGD|708556 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IC] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IMP]
[GO:0005769 "early endosome" evidence=IDA] [GO:0005770 "late
endosome" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030496 "midbody" evidence=IDA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0051036 "regulation of
endosome size" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
RGD:708556 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0005770
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 GO:GO:0000815
eggNOG:COG5491 CTD:51652 GeneTree:ENSGT00550000074896
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AY150169 IPI:IPI00192445 RefSeq:NP_758834.1
UniGene:Rn.162751 ProteinModelPortal:Q8CGS4 SMR:Q8CGS4
STRING:Q8CGS4 PhosphoSite:Q8CGS4 Ensembl:ENSRNOT00000010253
GeneID:282834 KEGG:rno:282834 UCSC:RGD:708556 InParanoid:Q8CGS4
NextBio:624897 Genevestigator:Q8CGS4 GermOnline:ENSRNOG00000007356
Uniprot:Q8CGS4
Length = 223
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/138 (26%), Positives = 83/138 (60%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 48 VKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 107
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+ + ID+
Sbjct: 108 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDR 167
Query: 125 VLGEIGIEISGKMANAPT 142
+L EI +G + AP+
Sbjct: 168 ILFEI---TAGALGKAPS 182
>UNIPROTKB|E2RDX0 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 OMA:NIDRQIR EMBL:AAEX03010929
Ensembl:ENSCAFT00000011979 NextBio:20851539 Uniprot:E2RDX0
Length = 292
Score = 178 (67.7 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 42/169 (24%), Positives = 91/169 (53%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
+K AAK+G K +LAK++I+ RK ++ YA++ ++S+ + K + +++A +++ +
Sbjct: 119 VKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKS 178
Query: 65 ADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQ 124
+ MK M S++K +I A+ +E + + + + +EM+++ + M + + E+ + ID+
Sbjct: 179 TEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDK 238
Query: 125 VLGEIGIEISGKMANAPTXXXXXXXXXXXXXXTQVPSDAE-IEAQLARL 172
+L EI GK + T ++ + E +EA +RL
Sbjct: 239 ILFEITAGALGKAPSKVTDALPEPEPSGAMAASEDEEEEEALEAMQSRL 287
>DICTYBASE|DDB_G0284769 [details] [associations]
symbol:vps24 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0284769 GenomeReviews:CM000153_GR EMBL:AAFI02000071
GO:GO:0015031 GO:GO:0000815 eggNOG:COG5491 KO:K12193 OMA:MSKEMMK
RefSeq:XP_638395.1 ProteinModelPortal:Q54P63 STRING:Q54P63
PRIDE:Q54P63 EnsemblProtists:DDB0234036 GeneID:8624764
KEGG:ddi:DDB_G0284769 InParanoid:Q54P63 ProtClustDB:CLSZ2437297
Uniprot:Q54P63
Length = 207
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/141 (29%), Positives = 81/141 (57%)
Query: 5 IKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNT 64
IK+ K GD+ +A LAK+++ RK K R Y A+ +++S+ +Q + SN+ M + N
Sbjct: 46 IKERVKAGDQKSAKTLAKEIVNSRKAKERIYTAKAQMNSVSMQ---LQSNLAMTKVQGNL 102
Query: 65 A---DTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKI 121
A + MK MN ++K ++ +T+ + +EMI + D ++G D E+E+
Sbjct: 103 AKSTEIMKMMNDLIKLPELNKVMMAMGSEMTKAGIMEEMISDVFD--MQGEDLEEEAEME 160
Query: 122 IDQVLGEIGIEISG-KMANAP 141
+++++ EI +SG ++++AP
Sbjct: 161 VNKIMDEI--LVSGPQVSSAP 179
>ASPGD|ASPL0000002845 [details] [associations]
symbol:vps24 species:162425 "Emericella nidulans"
[GO:0071467 "cellular response to pH" evidence=IMP;IPI] [GO:0043936
"asexual sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0030448 "hyphal growth" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 EMBL:BN001301 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 OMA:MSKEMMK EMBL:AACD01000115
OrthoDB:EOG4F7RVD RefSeq:XP_664524.1 ProteinModelPortal:Q5AXR0
STRING:Q5AXR0 EnsemblFungi:CADANIAT00007726 GeneID:2870630
KEGG:ani:AN6920.2 Uniprot:Q5AXR0
Length = 228
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/132 (25%), Positives = 85/132 (64%)
Query: 9 AKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNTADTM 68
AK+ + + A +LA++L+++R+Q TR ++ ++ S+ +Q + K+ +++ + M
Sbjct: 63 AKQAN-LEAKMLARELVRVRRQTTRLTTSRAQLQSVQMQVNEAFAVRKIQGSLQKSTGIM 121
Query: 69 KNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEAL--DDMLEGSDDEQESNKIIDQVL 126
K++N++++ Q++A+ + + R + +EM+D+A+ +++LE D+E E+++ +D++L
Sbjct: 122 KDVNTLIRLPQLSATMHQLATELVRAGIIEEMVDDAIPNNELLE--DEEAEADEEVDKIL 179
Query: 127 GEIGIEISGKMA 138
EI + GK++
Sbjct: 180 QEI---LQGKLS 188
>SGD|S000001524 [details] [associations]
symbol:VPS24 "Subunit of the ESCRT-III complex" species:4932
"Saccharomyces cerevisiae" [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000815
"ESCRT III complex" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0070676 "intralumenal vesicle formation" evidence=IMP]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
SGD:S000001524 GO:GO:0015031 GO:GO:0012505 EMBL:BK006944
GO:GO:0045324 GO:GO:0000815 EMBL:X71621 eggNOG:COG5491
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219 KO:K12193
GO:GO:0043162 GO:GO:0070676 OrthoDB:EOG4F7RVD EMBL:Z28041
EMBL:AY557901 PIR:S37862 RefSeq:NP_012883.1
ProteinModelPortal:P36095 SMR:P36095 DIP:DIP-7295N IntAct:P36095
MINT:MINT-468346 STRING:P36095 PaxDb:P36095 EnsemblFungi:YKL041W
GeneID:853825 KEGG:sce:YKL041W CYGD:YKL041w OMA:NIDRQIR
NextBio:975014 Genevestigator:P36095 GermOnline:YKL041W
Uniprot:P36095
Length = 224
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 38/134 (28%), Positives = 79/134 (58%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQ-NKTMGSNIKMAE 59
Q+L IKK+AK+ D + AK+L QI KQ R Y ++ ++ S+ ++ ++ + N ++
Sbjct: 46 QQL-IKKSAKKNDVRTVRLYAKELYQINKQYDRMYTSRAQLDSVRMKIDEAIRMNT-LSN 103
Query: 60 AMKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALD---DMLEGSDD-- 114
M ++A M+ +NS+++ Q+ + E ++ + + + EM+D+ ++ D+ E D+
Sbjct: 104 QMADSAGLMREVNSLVRLPQLRNTMIELEKELMKSGIISEMVDDTMESVGDVGEEMDEAV 163
Query: 115 EQESNKIIDQVLGE 128
++E NKI++Q E
Sbjct: 164 DEEVNKIVEQYTNE 177
>DICTYBASE|DDB_G0290087 [details] [associations]
symbol:vps2A "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0290087 GO:GO:0015031 GenomeReviews:CM000154_GR
GO:GO:0000815 eggNOG:COG5491 KO:K12191 EMBL:AAFI02000152
RefSeq:XP_635908.2 ProteinModelPortal:Q54GK9 STRING:Q54GK9
EnsemblProtists:DDB0234032 GeneID:8627474 KEGG:ddi:DDB_G0290087
OMA:QDMFEDD Uniprot:Q54GK9
Length = 206
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 4 EIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKN 63
+IK+ AK G A +A L+++R Q R A + + ++ + T+ +N MA AM +
Sbjct: 46 KIKQLAKAGRNDEAKRMANDLVKLRGQMERMRATKTTLSAVSTKTTTIKANQTMANAMAS 105
Query: 64 TADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIID 123
M MN Q+ + E+++ R+ MT+EM + DM E + ++E++ I+
Sbjct: 106 ATKAMSTMNKQTDLVQLQKTMMEYEKQTQRVEMTEEM----MQDMFEDDEVDEEADDILS 161
Query: 124 QVLGEIGIEISGKM 137
+V+ E+ ++ KM
Sbjct: 162 KVVDEVCLDNYQKM 175
>UNIPROTKB|H9L0W3 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 GeneTree:ENSGT00550000074737
EMBL:AADN02053084 EMBL:AADN02053085 Ensembl:ENSGALT00000029274
OMA:EMMNDAT Uniprot:H9L0W3
Length = 104
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 75 MKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNKIIDQVLGEIGIEIS 134
+K QI EF++ M+M +E++++A+DD + DDE+ES+ ++ QVL E+G+ ++
Sbjct: 1 LKLPQIQKIMMEFEKQAEIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLT 60
Query: 135 GKMANAPT---XXXXXXXXXXXXXXTQVPSDAEIEAQLARL 172
++A P +DA++E +L L
Sbjct: 61 DELATLPPPGGSLAAGEGRAAEAAAALADADADLEERLKNL 101
>UNIPROTKB|G4MKS3 [details] [associations]
symbol:MGG_06670 "Charged multivesicular body protein 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:CM001231 KO:K12193 RefSeq:XP_003709375.1
ProteinModelPortal:G4MKS3 EnsemblFungi:MGG_06670T0 GeneID:2684843
KEGG:mgr:MGG_06670 Uniprot:G4MKS3
Length = 234
Score = 126 (49.4 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 32/139 (23%), Positives = 77/139 (55%)
Query: 7 KAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAMKNTAD 66
+AA+ ++ A A++L++ RK R ++ ++ S+ +Q + K+ +++ +
Sbjct: 62 QAAQAQKEVRA--FARELVRARKTSARLVTSKAQLSSVQMQVNEAFAVRKIEGSIRASVG 119
Query: 67 TMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNK-IIDQV 125
M+ +NS+++ ++A + Q+ + + + +EM+ E+ + ++ E+E+ + +D+V
Sbjct: 120 VMREVNSLVRLPELAGTMQQLSVELMKAGIIEEMVQESFPEADALAEYEEEAGEGEVDKV 179
Query: 126 LGEI---GIEISGKMANAP 141
LGEI E +GK+ AP
Sbjct: 180 LGEILKDKTETTGKLPTAP 198
>TAIR|locus:2007883 [details] [associations]
symbol:VPS46.1 "vacuolar protein sorting 46.1"
species:3702 "Arabidopsis thaliana" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
[GO:0032509 "endosome transport via multivesicular body sorting
pathway" evidence=IGI] [GO:0040007 "growth" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002684 GO:GO:0040007 GO:GO:0015031
GO:GO:0000578 eggNOG:COG5491 KO:K12197 GO:GO:0032509 OMA:AKMATIT
EMBL:AY085606 EMBL:AK118350 IPI:IPI00533081 RefSeq:NP_173215.1
UniGene:At.41817 IntAct:Q8LE58 STRING:Q8LE58
EnsemblPlants:AT1G17730.1 GeneID:838349 KEGG:ath:AT1G17730
TAIR:At1g17730 InParanoid:Q8LE58 ProtClustDB:CLSN2682103
Genevestigator:Q8LE58 Uniprot:Q8LE58
Length = 203
Score = 117 (46.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/134 (20%), Positives = 66/134 (49%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA 60
++L++KKA ++G+ A I A+ I+ R ++ ++ ++ + T + ++
Sbjct: 35 EKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLSSRLDAVVARLDTQAKMATITKS 94
Query: 61 MKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNK 120
M N ++++ + ++++ + F++ M + E +D A+ S E E N
Sbjct: 95 MTNIVKSLESSLTTGNLQKMSETMDSFEKQFVNMEVQAEFMDNAMAGSTSLSTPEGEVNS 154
Query: 121 IIDQVLGEIGIEIS 134
++ QV + G+E+S
Sbjct: 155 LMQQVADDYGLEVS 168
>POMBASE|SPAC9E9.14 [details] [associations]
symbol:vps24 "ESCRT III complex subunit Vps24"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006900 "membrane budding" evidence=IC]
[GO:0012505 "endomembrane system" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IMP] [GO:0045324 "late endosome to vacuole
transport" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
PomBase:SPAC9E9.14 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0012505 GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 GO:GO:0006900 OMA:MKIVNNL PIR:T39221
RefSeq:NP_594587.1 ProteinModelPortal:O14296 STRING:O14296
EnsemblFungi:SPAC9E9.14.1 GeneID:2542234 KEGG:spo:SPAC9E9.14
OrthoDB:EOG4F7RVD NextBio:20803301 Uniprot:O14296
Length = 231
Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/127 (21%), Positives = 71/127 (55%)
Query: 2 ELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEAM 61
E+++K+ AK+ D ILAK++ + + R ++ + S+ +Q + +K+ M
Sbjct: 46 EVQLKQLAKQSDITNMRILAKEIARANRHGKRLAESKALLGSLSLQLNDQMAMLKIQGTM 105
Query: 62 KNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEAL----DD--MLEGSDDE 115
+++ M++++S+++ Q++ + + +T+ + +EM DE DD +++ +D++
Sbjct: 106 QSSTKIMQDVSSLIRLPQLSETMRNLSMELTKAGVLEEMRDEMFLPVEDDEELMDLADED 165
Query: 116 QESNKII 122
+E +I+
Sbjct: 166 EEVQEIL 172
>TAIR|locus:2032607 [details] [associations]
symbol:VPS46.2 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS;RCA] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0032509 "endosome transport via
multivesicular body sorting pathway" evidence=IGI] [GO:0040007
"growth" evidence=IGI] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002684 GO:GO:0040007 GO:GO:0015031 GO:GO:0009793
EMBL:AC008017 GO:GO:0000578 KO:K12197 OMA:EHLFNLK GO:GO:0032509
ProtClustDB:CLSN2682103 UniGene:At.22952 UniGene:At.71264
EMBL:AY059851 EMBL:AY081673 IPI:IPI00527973 PIR:G96755
RefSeq:NP_565053.1 ProteinModelPortal:Q9SSM4 IntAct:Q9SSM4
STRING:Q9SSM4 PRIDE:Q9SSM4 EnsemblPlants:AT1G73030.1 GeneID:843634
KEGG:ath:AT1G73030 TAIR:At1g73030 InParanoid:Q9SSM4
PhylomeDB:Q9SSM4 ArrayExpress:Q9SSM4 Genevestigator:Q9SSM4
Uniprot:Q9SSM4
Length = 203
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/134 (19%), Positives = 66/134 (49%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA 60
++L++KKA ++G+ A I A+ I+ R ++ ++ ++ + T + ++
Sbjct: 35 EKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLASRLDAVVARLDTQAKMTTITKS 94
Query: 61 MKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQESNK 120
M N ++++ + ++++ + F++ M + E ++ A+ S E E N
Sbjct: 95 MTNIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNS 154
Query: 121 IIDQVLGEIGIEIS 134
++ QV + G+E+S
Sbjct: 155 LMQQVADDYGLEVS 168
>DICTYBASE|DDB_G0267394 [details] [associations]
symbol:vps46 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0045324 "late endosome to vacuole transport" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0267394 GenomeReviews:CM000150_GR EMBL:AAFI02000003
GO:GO:0010008 GO:GO:0005770 GO:GO:0006623 GO:GO:0045324
eggNOG:COG5491 KO:K12197 OMA:EHLFNLK EMBL:AF081802
RefSeq:XP_647634.1 ProteinModelPortal:O96552 STRING:O96552
PRIDE:O96552 EnsemblProtists:DDB0191317 GeneID:8616449
KEGG:ddi:DDB_G0267394 Uniprot:O96552
Length = 192
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/145 (20%), Positives = 71/145 (48%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA 60
Q++++KKA ++G+ A I A+ I+ + Q ++ ++ + +T I+M
Sbjct: 29 QKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYLRLASRIDAVASRVETA---IRMKSV 85
Query: 61 MKNTADTMKNMNSIMKP---EQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQE 117
+ A+ +K+M M+ E+I +F++ +++ ++ A++ S +
Sbjct: 86 TGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDLDVQSVYVENAMNQTTTLSTPADQ 145
Query: 118 SNKIIDQVLGEIGIEISGKMANAPT 142
+ +I QV E G+ + +M +AP+
Sbjct: 146 VDLLISQVADEHGLNVGMQMGSAPS 170
>UNIPROTKB|F1NVQ6 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074957 IPI:IPI00582566 OMA:EHLFNLK
EMBL:AADN02013150 Ensembl:ENSGALT00000006500 Uniprot:F1NVQ6
Length = 199
Score = 103 (41.3 bits), Expect = 0.00033, P = 0.00033
Identities = 30/146 (20%), Positives = 74/146 (50%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIG--IQNK-TMGSNIK- 56
++ +IKKA ++G+ A I A+ I+ + Q +V ++ +Q TMG K
Sbjct: 32 EKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKS 91
Query: 57 MAEAMKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQ 116
MA +K+ T+K+MN E+I+A +F+ +++ + +++ + + + +
Sbjct: 92 MAGVVKSMDATLKSMNL----EKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQN 147
Query: 117 ESNKIIDQVLGEIGIEISGKMANAPT 142
+ + ++ ++ E G++++ ++ T
Sbjct: 148 QVDMLLQEMADEAGLDLNMELPQGQT 173
>UNIPROTKB|Q7LBR1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9606 "Homo sapiens" [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 CTD:57132 HOVERGEN:HBG080200 KO:K12197 OMA:EHLFNLK
EMBL:AF306520 EMBL:AF281064 EMBL:BC065933 EMBL:BC012733
IPI:IPI00156984 RefSeq:NP_065145.2 UniGene:Hs.656244 PDB:3EAB
PDBsum:3EAB ProteinModelPortal:Q7LBR1 SMR:Q7LBR1 DIP:DIP-48534N
IntAct:Q7LBR1 MINT:MINT-6946813 PhosphoSite:Q7LBR1 DMDM:73917735
PeptideAtlas:Q7LBR1 PRIDE:Q7LBR1 DNASU:57132
Ensembl:ENST00000526991 GeneID:57132 KEGG:hsa:57132 UCSC:uc002kqe.3
GeneCards:GC18P011851 HGNC:HGNC:24287 MIM:606486 neXtProt:NX_Q7LBR1
PharmGKB:PA142672110 EvolutionaryTrace:Q7LBR1 GenomeRNAi:57132
NextBio:63047 ArrayExpress:Q7LBR1 Bgee:Q7LBR1 CleanEx:HS_C18orf2
CleanEx:HS_CHMP1B Genevestigator:Q7LBR1 Uniprot:Q7LBR1
Length = 199
Score = 102 (41.0 bits), Expect = 0.00045, P = 0.00045
Identities = 25/145 (17%), Positives = 73/145 (50%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA 60
++ +IKKA ++G+ A I A+ I+ + Q +V ++ + +T + M +
Sbjct: 32 EKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTA---VTMGKV 88
Query: 61 MKNTADTMKNMNSIMKP---EQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQE 117
K+ A +K+M++ +K E+I+A +F+ +++ + +++ + + + +
Sbjct: 89 TKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQ 148
Query: 118 SNKIIDQVLGEIGIEISGKMANAPT 142
+ ++ ++ E G++++ ++ T
Sbjct: 149 VDMLLQEMADEAGLDLNMELPQGQT 173
>MGI|MGI:1914314 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1914314 GO:GO:0005829 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0007049 EMBL:AK014091 EMBL:AK151071
EMBL:CT010307 EMBL:BC002229 IPI:IPI00117187 RefSeq:NP_077152.1
UniGene:Mm.73777 ProteinModelPortal:Q99LU0 SMR:Q99LU0 IntAct:Q99LU0
STRING:Q99LU0 PhosphoSite:Q99LU0 PaxDb:Q99LU0 PRIDE:Q99LU0
GeneID:67064 KEGG:mmu:67064 UCSC:uc008flu.2 CTD:57132
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200
InParanoid:Q99LU0 KO:K12197 OrthoDB:EOG4PVP0T NextBio:323464
CleanEx:MM_CHMP1B Genevestigator:Q99LU0
GermOnline:ENSMUSG00000031242 Uniprot:Q99LU0
Length = 199
Score = 102 (41.0 bits), Expect = 0.00045, P = 0.00045
Identities = 30/146 (20%), Positives = 73/146 (50%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIG--IQNK-TMGSNIK- 56
++ +IKKA ++G+ A I A+ I+ + Q +V ++ +Q TMG K
Sbjct: 32 EKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMSARVDAVAARVQTAVTMGKVTKS 91
Query: 57 MAEAMKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQ 116
MA +K+ T+K+MN E+I+A +F+ +++ + +++ + + +
Sbjct: 92 MAGVVKSMDATLKSMNL----EKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQN 147
Query: 117 ESNKIIDQVLGEIGIEISGKMANAPT 142
+ + ++ ++ E G++++ ++ T
Sbjct: 148 QVDMLLQEMADEAGLDLNMELPQGQT 173
>UNIPROTKB|Q5ZKX1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
EMBL:AJ719963 IPI:IPI00582566 RefSeq:NP_001006428.1
UniGene:Gga.6697 ProteinModelPortal:Q5ZKX1 STRING:Q5ZKX1
GeneID:422143 KEGG:gga:422143 InParanoid:Q5ZKX1 NextBio:20824822
Uniprot:Q5ZKX1
Length = 199
Score = 101 (40.6 bits), Expect = 0.00065, P = 0.00065
Identities = 30/146 (20%), Positives = 73/146 (50%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIG--IQNK-TMGSNIK- 56
++ +IKKA ++G+ A I A+ I+ + Q +V ++ +Q TMG K
Sbjct: 32 EKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKS 91
Query: 57 MAEAMKNTADTMKNMNSIMKPEQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQ 116
MA +K+ T+K+MN E+I+A +F+ +++ + ++ + + + +
Sbjct: 92 MAGVVKSMDATLKSMNL----EKISALMDKFEHQFETLDVQTQQMENTMSNTTTLTTPQN 147
Query: 117 ESNKIIDQVLGEIGIEISGKMANAPT 142
+ + ++ ++ E G++++ ++ T
Sbjct: 148 QVDMLLQEMADEAGLDLNMELPQGQT 173
>RGD|1593500 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1593500
GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T EMBL:BC168175 IPI:IPI00764309
UniGene:Rn.39132 STRING:B4F787 UCSC:RGD:1593500
Genevestigator:B4F787 Uniprot:B4F787
Length = 230
Score = 102 (41.0 bits), Expect = 0.00069, P = 0.00069
Identities = 25/145 (17%), Positives = 73/145 (50%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA 60
++ +IKKA ++G+ A I A+ I+ + Q +V ++ + +T + M +
Sbjct: 63 EKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTA---VTMGKV 119
Query: 61 MKNTADTMKNMNSIMKP---EQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQE 117
K+ A +K+M++ +K E+I+A +F+ +++ + +++ + + + +
Sbjct: 120 TKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQ 179
Query: 118 SNKIIDQVLGEIGIEISGKMANAPT 142
+ ++ ++ E G++++ ++ T
Sbjct: 180 VDMLLQEMADEAGLDLNMELPQGQT 204
>UNIPROTKB|Q5E994 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0007049 CTD:57132
HOVERGEN:HBG080200 KO:K12197 EMBL:BT021026 EMBL:BC105547
IPI:IPI00713299 RefSeq:NP_001014904.1 UniGene:Bt.803
ProteinModelPortal:Q5E994 GeneID:512033 KEGG:bta:512033
NextBio:20870218 Uniprot:Q5E994
Length = 199
Score = 100 (40.3 bits), Expect = 0.00088, P = 0.00088
Identities = 25/145 (17%), Positives = 73/145 (50%)
Query: 1 QELEIKKAAKEGDKIAATILAKQLIQIRKQKTRTYAAQGKVHSIGIQNKTMGSNIKMAEA 60
++ +IKKA ++G+ A I A+ I+ + Q +V ++ + +T + M +
Sbjct: 32 EKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTA---VTMGKV 88
Query: 61 MKNTADTMKNMNSIMKP---EQIAASAQEFQQGITRMNMTDEMIDEALDDMLEGSDDEQE 117
K+ A +K+M++ +K E+I+A +F+ +++ + +++ + + + +
Sbjct: 89 TKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQGQ 148
Query: 118 SNKIIDQVLGEIGIEISGKMANAPT 142
+ ++ ++ E G++++ ++ T
Sbjct: 149 VDMLLQEMADEAGLDLNMELPQGQT 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.124 0.314 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 175 161 0.00074 107 3 10 23 0.45 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 526 (56 KB)
Total size of DFA: 148 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.56u 0.09s 24.65t Elapsed: 00:00:51
Total cpu time: 24.57u 0.09s 24.66t Elapsed: 00:00:51
Start: Thu Aug 15 13:46:50 2013 End: Thu Aug 15 13:47:41 2013