Your job contains 1 sequence.
>psy1616
MREVKIRKLCLNICVGESGDRLTRAAKTKAVDPAKPVAKKGKKDKSKNVMREVKIRKLCL
NICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTRSKGRRNPGERASSFMKPLVVLALPG
MYLFYKYNQYKQQQQEQNRRKVTERELDHLNQKIHKAQSLCLHHSGNFGFGIQEHIDLGI
KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKEDAMKWFQTKMLFRR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1616
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0013325 - symbol:RpL11 "Ribosomal protein L11" spe... 339 3.3e-53 2
UNIPROTKB|Q5VVC8 - symbol:RPL11 "60S ribosomal protein L1... 306 9.8e-50 2
UNIPROTKB|Q3T087 - symbol:RPL11 "60S ribosomal protein L1... 305 1.3e-49 2
UNIPROTKB|E2R9G7 - symbol:RPL11 "Uncharacterized protein"... 305 1.3e-49 2
UNIPROTKB|P62913 - symbol:RPL11 "60S ribosomal protein L1... 305 1.3e-49 2
UNIPROTKB|I3LD74 - symbol:RPL11 "60S ribosomal protein L1... 305 1.3e-49 2
UNIPROTKB|Q29205 - symbol:RPL11 "60S ribosomal protein L1... 305 1.3e-49 2
UNIPROTKB|Q6QMZ8 - symbol:RPL11 "60S ribosomal protein L1... 305 1.3e-49 2
MGI|MGI:1914275 - symbol:Rpl11 "ribosomal protein L11" sp... 305 1.3e-49 2
RGD|1308681 - symbol:Rpl11 "ribosomal protein L11" specie... 305 1.3e-49 2
UNIPROTKB|F2Z3S4 - symbol:Rpl11 "60S ribosomal protein L1... 305 1.3e-49 2
UNIPROTKB|Q90YV7 - symbol:rpl11 "60S ribosomal protein L1... 304 1.6e-49 2
ZFIN|ZDB-GENE-040625-147 - symbol:rpl11 "ribosomal protei... 304 1.6e-49 2
UNIPROTKB|Q5RC11 - symbol:RPL11 "60S ribosomal protein L1... 301 3.3e-49 2
UNIPROTKB|E1C3K3 - symbol:RPL11 "Uncharacterized protein"... 300 4.2e-49 2
WB|WBGene00004423 - symbol:rpl-11.2 species:6239 "Caenorh... 260 4.1e-45 2
WB|WBGene00004422 - symbol:rpl-11.1 species:6239 "Caenorh... 257 8.6e-45 2
TAIR|locus:2052432 - symbol:RPL16A "ribosomal protein lar... 281 5.9e-44 2
DICTYBASE|DDB_G0279189 - symbol:rpl11 "S60 ribosomal prot... 280 7.6e-44 2
TAIR|locus:2099024 - symbol:AT3G58700 species:3702 "Arabi... 279 9.6e-44 2
TAIR|locus:2124112 - symbol:RPL16B "ribosomal protein L16... 279 9.6e-44 2
TAIR|locus:505006673 - symbol:AT5G45775 species:3702 "Ara... 279 9.6e-44 2
GENEDB_PFALCIPARUM|PF07_0079 - symbol:PF07_0079 "60S ribo... 261 1.1e-42 2
UNIPROTKB|Q8IBQ6 - symbol:PF07_0079 "60S ribosomal protei... 261 1.1e-42 2
UNIPROTKB|F1NYL7 - symbol:RPL11 "Uncharacterized protein"... 239 1.1e-42 2
POMBASE|SPAC26A3.07c - symbol:rpl1101 "60S ribosomal prot... 261 1.1e-40 2
POMBASE|SPBC17G9.10 - symbol:rpl1102 "60S ribosomal prote... 261 1.1e-40 2
SGD|S000006306 - symbol:RPL11A "Ribosomal 60S subunit pro... 254 1.2e-39 2
SGD|S000003317 - symbol:RPL11B "Ribosomal 60S subunit pro... 254 1.2e-39 2
ASPGD|ASPL0000072443 - symbol:AN4475 species:162425 "Emer... 233 2.2e-38 2
UNIPROTKB|E2QTG3 - symbol:E2QTG3 "Uncharacterized protein... 243 1.0e-36 2
UNIPROTKB|Q5VVC9 - symbol:RPL11 "60S ribosomal protein L1... 229 1.9e-35 2
UNIPROTKB|F1LVT8 - symbol:F1LVT8 "Uncharacterized protein... 218 4.7e-29 2
UNIPROTKB|F1LZM9 - symbol:F1LZM9 "Uncharacterized protein... 184 4.9e-24 2
UNIPROTKB|F6XQS3 - symbol:F6XQS3 "Uncharacterized protein... 163 7.3e-20 2
UNIPROTKB|E2R6N0 - symbol:E2R6N0 "Uncharacterized protein... 163 9.3e-20 2
UNIPROTKB|F1M7C1 - symbol:F1M7C1 "Uncharacterized protein... 192 2.7e-18 2
>FB|FBgn0013325 [details] [associations]
symbol:RpL11 "Ribosomal protein L11" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=IDA;NAS] [GO:0006412 "translation" evidence=IEA;NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:AE013599 GO:GO:0051298 GO:GO:0005811
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868 OMA:HMGVGES
GeneTree:ENSGT00390000013411 CTD:6135 EMBL:U15643 EMBL:AY094790
PIR:S60245 RefSeq:NP_477054.1 UniGene:Dm.700
ProteinModelPortal:P46222 SMR:P46222 DIP:DIP-18297N IntAct:P46222
MINT:MINT-767987 STRING:P46222 PaxDb:P46222 PRIDE:P46222
EnsemblMetazoa:FBtr0086533 GeneID:37235 KEGG:dme:Dmel_CG7726
FlyBase:FBgn0013325 InParanoid:P46222 OrthoDB:EOG4D7WNX
PhylomeDB:P46222 ChiTaRS:RPL11 GenomeRNAi:37235 NextBio:802670
GermOnline:CG7726 Uniprot:P46222
Length = 184
Score = 339 (124.4 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 61/68 (89%), Positives = 65/68 (95%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGFQHRLTKED
Sbjct: 107 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKED 166
Query: 225 AMKWFQTK 232
AMKWFQ K
Sbjct: 167 AMKWFQQK 174
Score = 229 (85.7 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++ IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT RS G RRN
Sbjct: 15 NPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Score = 112 (44.5 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++ IRKLCLNICVGESGDRLTR
Sbjct: 17 MRDLHIRKLCLNICVGESGDRLTR 40
>UNIPROTKB|Q5VVC8 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 HOVERGEN:HBG055214 ChiTaRS:RPL11
UniGene:Hs.719951 HGNC:HGNC:10301 EMBL:AL451000 SMR:Q5VVC8
Ensembl:ENST00000458455 Uniprot:Q5VVC8
Length = 174
Score = 306 (112.8 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 52/69 (75%), Positives = 65/69 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 100 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 159
Query: 225 AMKWFQTKM 233
AM+WFQ K+
Sbjct: 160 AMRWFQQKV 168
Score = 229 (85.7 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 63
Score = 118 (46.6 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 10 MRELRIRKLCLNICVGESGDRLTR 33
>UNIPROTKB|Q3T087 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0042273
GO:GO:0019843 GO:GO:0034504 GO:GO:0006364 GO:GO:0022625
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 EMBL:BC102524
IPI:IPI00688640 RefSeq:NP_001069049.1 UniGene:Bt.19271
ProteinModelPortal:Q3T087 SMR:Q3T087 STRING:Q3T087 PRIDE:Q3T087
Ensembl:ENSBTAT00000027850 GeneID:512745 KEGG:bta:512745 CTD:6135
HOVERGEN:HBG055214 InParanoid:Q3T087 OrthoDB:EOG4BG8X4
NextBio:20870541 Uniprot:Q3T087
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|E2R9G7 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135 EMBL:AAEX03001751
RefSeq:NP_001240835.1 ProteinModelPortal:E2R9G7
Ensembl:ENSCAFT00000035556 GeneID:100684296 KEGG:cfa:100684296
Uniprot:E2R9G7
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|P62913 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IMP] [GO:0006605 "protein targeting"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0042273
GO:GO:0019843 GO:GO:0034504 GO:GO:0006364 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES CTD:6135 HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4
ChiTaRS:RPL11 EMBL:X79234 EMBL:L05092 EMBL:AF101385 EMBL:BC018970
EMBL:AF432212 EMBL:AB007171 IPI:IPI00376798 IPI:IPI00746438
PIR:S45049 RefSeq:NP_000966.2 RefSeq:NP_001186731.1
UniGene:Hs.719951 ProteinModelPortal:P62913 SMR:P62913
IntAct:P62913 MINT:MINT-1140097 STRING:P62913 PhosphoSite:P62913
DMDM:51702795 SWISS-2DPAGE:P62913 PaxDb:P62913 PRIDE:P62913
DNASU:6135 Ensembl:ENST00000374550 GeneID:6135 KEGG:hsa:6135
UCSC:uc001bhk.3 UCSC:uc001bhl.3 GeneCards:GC01P024018
HGNC:HGNC:10301 HPA:HPA002734 MIM:604175 MIM:612562
neXtProt:NX_P62913 Orphanet:124 PharmGKB:PA34664 InParanoid:P62913
PhylomeDB:P62913 GenomeRNAi:6135 NextBio:23831 PMAP-CutDB:P62913
ArrayExpress:P62913 Bgee:P62913 CleanEx:HS_RPL11
Genevestigator:P62913 GermOnline:ENSG00000142676 Uniprot:P62913
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|I3LD74 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9823 "Sus
scrofa" [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:HMGVGES
GeneTree:ENSGT00390000013411 EMBL:FP475977
ProteinModelPortal:I3LD74 SMR:I3LD74 PRIDE:I3LD74
Ensembl:ENSSSCT00000022802 Uniprot:I3LD74
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|Q29205 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0005730 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0034504 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868 CTD:6135
HOVERGEN:HBG055214 EMBL:AY547313 EMBL:AY550042 EMBL:F14532
RefSeq:NP_001001638.1 UniGene:Ssc.56710 ProteinModelPortal:Q29205
SMR:Q29205 GeneID:414422 KEGG:ssc:414422 Uniprot:Q29205
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|Q6QMZ8 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:34839
"Chinchilla lanigera" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0034504 "protein localization to nucleus" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOVERGEN:HBG055214 EMBL:AY533222
ProteinModelPortal:Q6QMZ8 SMR:Q6QMZ8 MINT:MINT-6733032 PRIDE:Q6QMZ8
Uniprot:Q6QMZ8
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>MGI|MGI:1914275 [details] [associations]
symbol:Rpl11 "ribosomal protein L11" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0006605 "protein targeting"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0034504 "protein
localization to nucleus" evidence=IMP] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISO] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 MGI:MGI:1914275 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135
HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4 EMBL:AK002998 EMBL:AK008422
EMBL:AK011211 EMBL:AK011800 EMBL:AK013923 EMBL:AK088967
EMBL:AK153486 EMBL:AK164445 EMBL:AK169053 EMBL:BC025077
EMBL:BC069896 IPI:IPI00331461 RefSeq:NP_080195.1 UniGene:Mm.276856
ProteinModelPortal:Q9CXW4 SMR:Q9CXW4 IntAct:Q9CXW4 STRING:Q9CXW4
PhosphoSite:Q9CXW4 PaxDb:Q9CXW4 PRIDE:Q9CXW4
Ensembl:ENSMUST00000102536 GeneID:67025 KEGG:mmu:67025
NextBio:323340 Bgee:Q9CXW4 CleanEx:MM_RPL11 Genevestigator:Q9CXW4
GermOnline:ENSMUSG00000070343 Uniprot:Q9CXW4
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>RGD|1308681 [details] [associations]
symbol:Rpl11 "ribosomal protein L11" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0006364
"rRNA processing" evidence=IEA;ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA;ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IEA;ISO] [GO:0034504 "protein
localization to nucleus" evidence=ISO;ISS] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IEA;ISO] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 RGD:1308681 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312
GeneTree:ENSGT00390000013411 HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4
EMBL:X62146 IPI:IPI00359103 PIR:JT0606 UniGene:Rn.129770
UniGene:Rn.14687 ProteinModelPortal:P62914 SMR:P62914 IntAct:P62914
STRING:P62914 PRIDE:P62914 Ensembl:ENSRNOT00000030043
UCSC:RGD:1308681 InParanoid:P62914 ArrayExpress:P62914
Genevestigator:P62914 GermOnline:ENSRNOG00000026260 Uniprot:P62914
Length = 178
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|F2Z3S4 [details] [associations]
symbol:Rpl11 "60S ribosomal protein L11" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 RGD:1308681
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
IPI:IPI00779353 ProteinModelPortal:F2Z3S4
Ensembl:ENSRNOT00000039585 Uniprot:F2Z3S4
Length = 176
Score = 305 (112.4 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR++KE+
Sbjct: 100 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEE 159
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 160 AMRWFQQK 167
Score = 229 (85.7 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 63
Score = 118 (46.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 10 MRELRIRKLCLNICVGESGDRLTR 33
>UNIPROTKB|Q90YV7 [details] [associations]
symbol:rpl11 "60S ribosomal protein L11" species:7998
"Ictalurus punctatus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0034504 "protein localization to nucleus" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOVERGEN:HBG055214 EMBL:AF401565
RefSeq:NP_001187040.1 UniGene:Ipu.322 ProteinModelPortal:Q90YV7
SMR:Q90YV7 GeneID:100304527 Uniprot:Q90YV7
Length = 178
Score = 304 (112.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 53/68 (77%), Positives = 62/68 (91%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++RK G +GF+HR+ K +
Sbjct: 102 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRKRGRIGFKHRIRKRE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>ZFIN|ZDB-GENE-040625-147 [details] [associations]
symbol:rpl11 "ribosomal protein L11" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IMP] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
ZFIN:ZDB-GENE-040625-147 GO:GO:0006917 GO:GO:0006412 GO:GO:0042593
GO:GO:0005840 GO:GO:0009790 GO:GO:0030218 GO:GO:0003735
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135
HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4 EMBL:CABZ01086825
EMBL:BC071420 EMBL:AY648841 IPI:IPI00492905 RefSeq:NP_001002139.1
UniGene:Dr.32573 SMR:Q6IQI6 STRING:Q6IQI6
Ensembl:ENSDART00000063870 GeneID:415229 KEGG:dre:415229
InParanoid:Q6IQI6 NextBio:20818895 Uniprot:Q6IQI6
Length = 178
Score = 304 (112.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 53/68 (77%), Positives = 63/68 (92%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++RKTG +G +HR+ KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRKTGRIGAKHRIRKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|Q5RC11 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9601
"Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504
"protein localization to nucleus" evidence=ISS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 GO:GO:0034504 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868
CTD:6135 HOVERGEN:HBG055214 EMBL:CR858471 RefSeq:NP_001125385.1
UniGene:Pab.13400 HSSP:P41201 ProteinModelPortal:Q5RC11 SMR:Q5RC11
GeneID:100172290 KEGG:pon:100172290 Uniprot:Q5RC11
Length = 178
Score = 301 (111.0 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 51/68 (75%), Positives = 63/68 (92%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG +G +HR++KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSITDKKRRTGCIGAKHRISKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>UNIPROTKB|E1C3K3 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:HMGVGES
GeneTree:ENSGT00390000013411 EMBL:AADN02043724 IPI:IPI00602500
PRIDE:E1C3K3 Ensembl:ENSGALT00000006305 ArrayExpress:E1C3K3
Uniprot:E1C3K3
Length = 178
Score = 300 (110.7 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 52/68 (76%), Positives = 63/68 (92%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G +HR+ KE+
Sbjct: 102 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGNIGAKHRIGKEE 161
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 162 AMRWFQQK 169
Score = 229 (85.7 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Score = 118 (46.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTR 35
>WB|WBGene00004423 [details] [associations]
symbol:rpl-11.2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 HSSP:P41201 EMBL:FO080099
PIR:T29860 RefSeq:NP_508413.1 ProteinModelPortal:Q19162 SMR:Q19162
DIP:DIP-26065N MINT:MINT-1118628 STRING:Q19162 PaxDb:Q19162
EnsemblMetazoa:F07D10.1.1 EnsemblMetazoa:F07D10.1.2 GeneID:180535
KEGG:cel:CELE_F07D10.1 UCSC:F07D10.1.1 CTD:180535 WormBase:F07D10.1
InParanoid:Q19162 NextBio:909780 Uniprot:Q19162
Length = 196
Score = 260 (96.6 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 47/68 (69%), Positives = 56/68 (82%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFG+QEHIDLGIKYDPSIGIYG+DFYVVL R G +A RRR G VG HR+ +E+
Sbjct: 109 TGNFGFGVQEHIDLGIKYDPSIGIYGMDFYVVLDRAGRRIAKRRRAPGRVGPSHRVEREE 168
Query: 225 AMKWFQTK 232
++KWFQ K
Sbjct: 169 SIKWFQQK 176
Score = 231 (86.4 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
NVMRE+KI+KLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT R+ G RRN
Sbjct: 17 NVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRN 72
Score = 117 (46.2 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE+KI+KLCLNICVGESGDRLTR
Sbjct: 19 MRELKIQKLCLNICVGESGDRLTR 42
>WB|WBGene00004422 [details] [associations]
symbol:rpl-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0009792
GO:GO:0040010 GO:GO:0006412 GO:GO:0005840 GO:GO:0040035
GO:GO:0003735 GO:GO:0040039 GO:GO:0007276 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:KPKTKKN
GeneTree:ENSGT00390000013411 EMBL:FO081343 PIR:T30978
RefSeq:NP_504008.1 ProteinModelPortal:Q94300 SMR:Q94300
DIP:DIP-25364N MINT:MINT-1088988 STRING:Q94300 PaxDb:Q94300
PRIDE:Q94300 EnsemblMetazoa:T22F3.4.1 EnsemblMetazoa:T22F3.4.2
GeneID:178778 KEGG:cel:CELE_T22F3.4 UCSC:T22F3.4.1 CTD:178778
WormBase:T22F3.4 InParanoid:Q94300 NextBio:902506 Uniprot:Q94300
Length = 196
Score = 257 (95.5 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFG+QEHIDLGIKYDP IGIYG+DFYVVL R G V+ RRR G +G HR+ KE+
Sbjct: 109 TGNFGFGVQEHIDLGIKYDPGIGIYGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEE 168
Query: 225 AMKWFQTK 232
+KWFQ K
Sbjct: 169 TIKWFQQK 176
Score = 231 (86.4 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
NVMRE+KI+KLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT R+ G RRN
Sbjct: 17 NVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRN 72
Score = 117 (46.2 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE+KI+KLCLNICVGESGDRLTR
Sbjct: 19 MRELKIQKLCLNICVGESGDRLTR 42
>TAIR|locus:2052432 [details] [associations]
symbol:RPL16A "ribosomal protein large subunit 16A"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;IDA;TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0009506
GO:GO:0009507 GO:GO:0005773 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:AC006931
GO:GO:0019843 GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 EMBL:X81799
EMBL:AY074636 IPI:IPI00547807 PIR:F84857 RefSeq:NP_850376.2
UniGene:At.50823 ProteinModelPortal:P42795 SMR:P42795 STRING:P42795
PRIDE:P42795 ProMEX:P42795 EnsemblPlants:AT2G42740.1 GeneID:818874
KEGG:ath:AT2G42740 GeneFarm:167 TAIR:At2g42740 HOGENOM:HOG000231312
InParanoid:P42795 KO:K02868 OMA:HMGVGES PhylomeDB:P42795
ProtClustDB:CLSN2684740 Genevestigator:P42795 GermOnline:AT2G42740
Uniprot:P42795
Length = 182
Score = 281 (104.0 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 52/68 (76%), Positives = 57/68 (83%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+G FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RPG+ VA RRR VG QHR+TK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDD 160
Query: 225 AMKWFQTK 232
AMKWFQ K
Sbjct: 161 AMKWFQVK 168
Score = 199 (75.1 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++K++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYT RS G RRN
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Score = 95 (38.5 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++K++KL LNI VGESGDRLTR
Sbjct: 11 MRDIKVQKLVLNISVGESGDRLTR 34
>DICTYBASE|DDB_G0279189 [details] [associations]
symbol:rpl11 "S60 ribosomal protein L11"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 dictyBase:DDB_G0279189
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 EMBL:AAFI02000030 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 KO:K02868 OMA:HMGVGES EMBL:X15382 PIR:S07562
RefSeq:XP_641729.1 ProteinModelPortal:P16168 SMR:P16168
STRING:P16168 PRIDE:P16168 EnsemblProtists:DDB0214853
GeneID:8621925 KEGG:ddi:DDB_G0279189 ProtClustDB:PTZ00156
Uniprot:P16168
Length = 202
Score = 280 (103.6 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 49/66 (74%), Positives = 58/66 (87%)
Query: 166 GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKEDA 225
G+FGFGIQEHIDLGIKYDPSIGIYG+DF+VVL RPGF VAH++R VGFQH++ KEDA
Sbjct: 126 GSFGFGIQEHIDLGIKYDPSIGIYGMDFFVVLSRPGFRVAHKKRAGAKVGFQHKIGKEDA 185
Query: 226 MKWFQT 231
+ WF+T
Sbjct: 186 VNWFKT 191
Score = 199 (75.1 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 44/56 (78%), Positives = 47/56 (83%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
NVMR ++I KL LNICVGESGDRL RAAKVLEQLTGQ PV+SKARYT RS RRN
Sbjct: 33 NVMRGLRIEKLVLNICVGESGDRLVRAAKVLEQLTGQTPVYSKARYTVRSFNIRRN 88
Score = 91 (37.1 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR ++I KL LNICVGESGDRL R
Sbjct: 35 MRGLRIEKLVLNICVGESGDRLVR 58
>TAIR|locus:2099024 [details] [associations]
symbol:AT3G58700 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS;IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 EMBL:AL161549 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL035526 EMBL:AL353032 EMBL:AB012245
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
ProtClustDB:CLSN2684740 EMBL:X81798 EMBL:X81800 EMBL:AF326876
EMBL:AF339697 EMBL:AY039570 EMBL:AY129487 EMBL:AF385722
EMBL:AY078021 EMBL:AY085232 EMBL:AY086211 EMBL:AY086300 EMBL:Z29034
IPI:IPI00537168 IPI:IPI00541507 PIR:S49033 PIR:T49153
RefSeq:NP_191429.1 RefSeq:NP_567563.1 RefSeq:NP_568649.2
RefSeq:NP_851137.1 UniGene:At.18929 UniGene:At.22889
ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 279 (103.3 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 52/68 (76%), Positives = 57/68 (83%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+G FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RPG+ VA RRR VG QHR+TK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDD 160
Query: 225 AMKWFQTK 232
AMKWFQ K
Sbjct: 161 AMKWFQVK 168
Score = 199 (75.1 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++K++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYT RS G RRN
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Score = 95 (38.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++K++KL LNI VGESGDRLTR
Sbjct: 11 MRDIKVQKLVLNISVGESGDRLTR 34
>TAIR|locus:2124112 [details] [associations]
symbol:RPL16B "ribosomal protein L16B" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;IDA;TAS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 EMBL:AL161549 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL035526 EMBL:AL353032 EMBL:AB012245
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
ProtClustDB:CLSN2684740 EMBL:X81798 EMBL:X81800 EMBL:AF326876
EMBL:AF339697 EMBL:AY039570 EMBL:AY129487 EMBL:AF385722
EMBL:AY078021 EMBL:AY085232 EMBL:AY086211 EMBL:AY086300 EMBL:Z29034
IPI:IPI00537168 IPI:IPI00541507 PIR:S49033 PIR:T49153
RefSeq:NP_191429.1 RefSeq:NP_567563.1 RefSeq:NP_568649.2
RefSeq:NP_851137.1 UniGene:At.18929 UniGene:At.22889
ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 279 (103.3 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 52/68 (76%), Positives = 57/68 (83%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+G FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RPG+ VA RRR VG QHR+TK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDD 160
Query: 225 AMKWFQTK 232
AMKWFQ K
Sbjct: 161 AMKWFQVK 168
Score = 199 (75.1 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++K++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYT RS G RRN
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Score = 95 (38.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++K++KL LNI VGESGDRLTR
Sbjct: 11 MRDIKVQKLVLNISVGESGDRLTR 34
>TAIR|locus:505006673 [details] [associations]
symbol:AT5G45775 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:AL161549 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 EMBL:AL035526 EMBL:AL353032
EMBL:AB012245 GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 KO:K02868 ProtClustDB:CLSN2684740 EMBL:X81798
EMBL:X81800 EMBL:AF326876 EMBL:AF339697 EMBL:AY039570 EMBL:AY129487
EMBL:AF385722 EMBL:AY078021 EMBL:AY085232 EMBL:AY086211
EMBL:AY086300 EMBL:Z29034 IPI:IPI00537168 IPI:IPI00541507
PIR:S49033 PIR:T49153 RefSeq:NP_191429.1 RefSeq:NP_567563.1
RefSeq:NP_568649.2 RefSeq:NP_851137.1 UniGene:At.18929
UniGene:At.22889 ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 279 (103.3 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 52/68 (76%), Positives = 57/68 (83%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+G FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RPG+ VA RRR VG QHR+TK+D
Sbjct: 101 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDD 160
Query: 225 AMKWFQTK 232
AMKWFQ K
Sbjct: 161 AMKWFQVK 168
Score = 199 (75.1 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++K++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYT RS G RRN
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Score = 95 (38.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++K++KL LNI VGESGDRLTR
Sbjct: 11 MRDIKVQKLVLNISVGESGDRLTR 34
>GENEDB_PFALCIPARUM|PF07_0079 [details] [associations]
symbol:PF07_0079 "60S ribosomal protein L11a,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002132 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
GO:GO:0006412 GO:GO:0003735 EMBL:AL844506 GO:GO:0022625
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
ProtClustDB:PTZ00156 HSSP:P41201 RefSeq:XP_001349097.1
ProteinModelPortal:Q8IBQ6 SMR:Q8IBQ6 PRIDE:Q8IBQ6
EnsemblProtists:PF07_0079:mRNA GeneID:2655123 KEGG:pfa:PF07_0079
EuPathDB:PlasmoDB:PF3D7_0719600 Uniprot:Q8IBQ6
Length = 173
Score = 261 (96.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPS GIYG+DFYV L R G+ V R R+ + H++TKED
Sbjct: 99 TGNFGFGIQEHIDLGIKYDPSTGIYGMDFYVHLSRSGYRVTRRTRRRSKISKTHKVTKED 158
Query: 225 AMKWFQTK 232
AMKWFQTK
Sbjct: 159 AMKWFQTK 166
Score = 207 (77.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 45/65 (69%), Positives = 53/65 (81%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRNPGER 105
NVMRE+K+ KL LNICVGESGDRLTRAA+VLEQLT Q+P+F K R+T RS G RRN E+
Sbjct: 7 NVMREIKVNKLVLNICVGESGDRLTRAARVLEQLTEQKPIFGKCRFTIRSFGVRRN--EK 64
Query: 106 ASSFM 110
S F+
Sbjct: 65 ISCFV 69
Score = 107 (42.7 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 20/24 (83%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE+K+ KL LNICVGESGDRLTR
Sbjct: 9 MREIKVNKLVLNICVGESGDRLTR 32
>UNIPROTKB|Q8IBQ6 [details] [associations]
symbol:PF07_0079 "60S ribosomal protein L11a, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002132
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412
GO:GO:0003735 EMBL:AL844506 GO:GO:0022625 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES ProtClustDB:PTZ00156
HSSP:P41201 RefSeq:XP_001349097.1 ProteinModelPortal:Q8IBQ6
SMR:Q8IBQ6 PRIDE:Q8IBQ6 EnsemblProtists:PF07_0079:mRNA
GeneID:2655123 KEGG:pfa:PF07_0079 EuPathDB:PlasmoDB:PF3D7_0719600
Uniprot:Q8IBQ6
Length = 173
Score = 261 (96.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPS GIYG+DFYV L R G+ V R R+ + H++TKED
Sbjct: 99 TGNFGFGIQEHIDLGIKYDPSTGIYGMDFYVHLSRSGYRVTRRTRRRSKISKTHKVTKED 158
Query: 225 AMKWFQTK 232
AMKWFQTK
Sbjct: 159 AMKWFQTK 166
Score = 207 (77.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 45/65 (69%), Positives = 53/65 (81%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRNPGER 105
NVMRE+K+ KL LNICVGESGDRLTRAA+VLEQLT Q+P+F K R+T RS G RRN E+
Sbjct: 7 NVMREIKVNKLVLNICVGESGDRLTRAARVLEQLTEQKPIFGKCRFTIRSFGVRRN--EK 64
Query: 106 ASSFM 110
S F+
Sbjct: 65 ISCFV 69
Score = 107 (42.7 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 20/24 (83%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE+K+ KL LNICVGESGDRLTR
Sbjct: 9 MREIKVNKLVLNICVGESGDRLTR 32
>UNIPROTKB|F1NYL7 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
GeneTree:ENSGT00390000013411 EMBL:AADN02043724 IPI:IPI00819936
Ensembl:ENSGALT00000040531 ArrayExpress:F1NYL7 Uniprot:F1NYL7
Length = 156
Score = 239 (89.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 42/51 (82%), Positives = 49/51 (96%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVG 215
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 101 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGNIG 151
Score = 229 (85.7 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 9 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 64
Score = 118 (46.6 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 11 MRELRIRKLCLNICVGESGDRLTR 34
>POMBASE|SPAC26A3.07c [details] [associations]
symbol:rpl1101 "60S ribosomal protein L11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 PomBase:SPBC17G9.10
PomBase:SPAC26A3.07c EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0022627 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
OrthoDB:EOG4M0JB6 EMBL:AB016005 EMBL:AF201080 PIR:T38395
RefSeq:NP_594150.1 RefSeq:NP_595899.1 ProteinModelPortal:Q10157
SMR:Q10157 STRING:Q10157 EnsemblFungi:SPAC26A3.07c.1
EnsemblFungi:SPBC17G9.10.1 GeneID:2539846 GeneID:2541591
KEGG:spo:SPAC26A3.07c KEGG:spo:SPBC17G9.10 NextBio:20800993
Uniprot:Q10157
Length = 174
Score = 261 (96.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 45/68 (66%), Positives = 55/68 (80%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYG+DFYVV+ RPG VA R+ + G VG+ H++ ED
Sbjct: 99 TGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAED 158
Query: 225 AMKWFQTK 232
+ WF+ K
Sbjct: 159 TINWFKQK 166
Score = 188 (71.2 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N M+E++I KL LNI +GESGDRLTRAAKVLEQL+GQ PVFSKARYT R G RRN
Sbjct: 7 NPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRN 62
Score = 86 (35.3 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
M+E++I KL LNI +GESGDRLTR
Sbjct: 9 MKELRISKLVLNISLGESGDRLTR 32
>POMBASE|SPBC17G9.10 [details] [associations]
symbol:rpl1102 "60S ribosomal protein L11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
PomBase:SPBC17G9.10 PomBase:SPAC26A3.07c EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022627 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES OrthoDB:EOG4M0JB6 EMBL:AB016005 EMBL:AF201080
PIR:T38395 RefSeq:NP_594150.1 RefSeq:NP_595899.1
ProteinModelPortal:Q10157 SMR:Q10157 STRING:Q10157
EnsemblFungi:SPAC26A3.07c.1 EnsemblFungi:SPBC17G9.10.1
GeneID:2539846 GeneID:2541591 KEGG:spo:SPAC26A3.07c
KEGG:spo:SPBC17G9.10 NextBio:20800993 Uniprot:Q10157
Length = 174
Score = 261 (96.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 45/68 (66%), Positives = 55/68 (80%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYDPSIGIYG+DFYVV+ RPG VA R+ + G VG+ H++ ED
Sbjct: 99 TGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAED 158
Query: 225 AMKWFQTK 232
+ WF+ K
Sbjct: 159 TINWFKQK 166
Score = 188 (71.2 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N M+E++I KL LNI +GESGDRLTRAAKVLEQL+GQ PVFSKARYT R G RRN
Sbjct: 7 NPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRN 62
Score = 86 (35.3 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
M+E++I KL LNI +GESGDRLTR
Sbjct: 9 MKELRISKLVLNISLGESGDRLTR 32
>SGD|S000006306 [details] [associations]
symbol:RPL11A "Ribosomal 60S subunit protein L11A"
species:4932 "Saccharomyces cerevisiae" [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 SGD:S000006306 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0000027 EMBL:U32445 GO:GO:0022625
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES EMBL:X01029 EMBL:AY693151 PIR:S59767 RefSeq:NP_015427.1
ProteinModelPortal:P0C0W9 SMR:P0C0W9 DIP:DIP-4764N IntAct:P0C0W9
MINT:MINT-564921 STRING:P0C0W9 PRIDE:P0C0W9 EnsemblFungi:YPR102C
GeneID:856217 KEGG:sce:YPR102C GeneTree:ENSGT00390000013411
OrthoDB:EOG4M0JB6 EvolutionaryTrace:P0C0W9 NextBio:981438
Genevestigator:P0C0W9 Uniprot:P0C0W9
Length = 174
Score = 254 (94.5 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGI EHIDLGIKYDPSIGI+G+DFYVV+ RPG V R+R G VG H+ TKED
Sbjct: 99 TGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKED 158
Query: 225 AMKWFQTK 232
+ WF+ K
Sbjct: 159 TVSWFKQK 166
Score = 185 (70.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++KI KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYT R+ G RRN
Sbjct: 7 NPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRN 62
Score = 93 (37.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++KI KL LNI VGESGDRLTR
Sbjct: 9 MRDLKIEKLVLNISVGESGDRLTR 32
>SGD|S000003317 [details] [associations]
symbol:RPL11B "Ribosomal 60S subunit protein L11B"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 SGD:S000003317 EMBL:BK006941 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 PDB:4B6A PDBsum:4B6A GO:GO:0000027
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:KPKTKKN GeneTree:ENSGT00390000013411 OrthoDB:EOG4M0JB6
EMBL:Z72870 EMBL:M12933 PIR:A02764 RefSeq:NP_011599.1 PDB:2NOQ
PDBsum:2NOQ ProteinModelPortal:Q3E757 SMR:Q3E757 DIP:DIP-29386N
IntAct:Q3E757 MINT:MINT-564941 STRING:Q3E757 PaxDb:Q3E757
PRIDE:Q3E757 EnsemblFungi:YGR085C GeneID:852976 KEGG:sce:YGR085C
EvolutionaryTrace:Q3E757 NextBio:972774 Genevestigator:Q3E757
Uniprot:Q3E757
Length = 174
Score = 254 (94.5 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGI EHIDLGIKYDPSIGI+G+DFYVV+ RPG V R+R G VG H+ TKED
Sbjct: 99 TGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKED 158
Query: 225 AMKWFQTK 232
+ WF+ K
Sbjct: 159 TVSWFKQK 166
Score = 185 (70.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MR++KI KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYT R+ G RRN
Sbjct: 7 NPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRN 62
Score = 93 (37.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MR++KI KL LNI VGESGDRLTR
Sbjct: 9 MRDLKIEKLVLNISVGESGDRLTR 32
>ASPGD|ASPL0000072443 [details] [associations]
symbol:AN4475 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BN001303 EMBL:AACD01000078 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
OrthoDB:EOG4M0JB6 RefSeq:XP_662079.1 ProteinModelPortal:Q5B4Q5
SMR:Q5B4Q5 STRING:Q5B4Q5 EnsemblFungi:CADANIAT00005971
GeneID:2872274 KEGG:ani:AN4475.2 Uniprot:Q5B4Q5
Length = 175
Score = 233 (87.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 150 LNQKIHKAQSLCLHHSGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRR 209
L K ++ + +GNFGFGI EHIDLGIKYDP+IGIYG+DFY + RPG VA RRR
Sbjct: 87 LKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPNIGIYGMDFYCCMTRPGERVAKRRR 146
Query: 210 KTGIVGFQHRLTKEDAMKWFQTK 232
+G HR+ + + M+WF+ +
Sbjct: 147 CKSTIGASHRINQTETMRWFKQR 169
Score = 194 (73.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++++KL LNI VGESGDRLTRAAKVLEQL+GQ PV+SKARYT R+ G RRN
Sbjct: 10 NPMRELRVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRN 65
Score = 93 (37.8 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++++KL LNI VGESGDRLTR
Sbjct: 12 MRELRVQKLVLNISVGESGDRLTR 35
>UNIPROTKB|E2QTG3 [details] [associations]
symbol:E2QTG3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002132 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
GeneTree:ENSGT00390000013411 EMBL:AAEX03002730
Ensembl:ENSCAFT00000019464 Uniprot:E2QTG3
Length = 174
Score = 243 (90.6 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQEHIDLGIKYD S GIY LDFYVVL F++A ++ +TG +G +HR++KE+
Sbjct: 99 TGNFGFGIQEHIDLGIKYDSS-GIYSLDFYVVLACKAFSIADKKHRTGCMGAKHRISKEE 157
Query: 225 AMKWFQTK 232
AM+WFQ K
Sbjct: 158 AMRWFQQK 165
Score = 168 (64.2 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 41/56 (73%), Positives = 44/56 (78%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARY-TRSKG-RRN 101
N M E++I K CLNICVGESGDRLTR AKVLEQL G PVFSKARY RS G +RN
Sbjct: 10 NPMWELRICKFCLNICVGESGDRLTRTAKVLEQL-G--PVFSKARYMVRSFGIKRN 62
Score = 98 (39.6 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
M E++I K CLNICVGESGDRLTR
Sbjct: 12 MWELRICKFCLNICVGESGDRLTR 35
>UNIPROTKB|Q5VVC9 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PROSITE:PS00358 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312
HOVERGEN:HBG055214 ChiTaRS:RPL11 UniGene:Hs.719951 HGNC:HGNC:10301
EMBL:AL451000 SMR:Q5VVC9 Ensembl:ENST00000443624 Uniprot:Q5VVC9
Length = 131
Score = 229 (85.7 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYT RS G RRN
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 63
Score = 170 (64.9 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 196
+GNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV
Sbjct: 100 TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 131
Score = 118 (46.6 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGESGDRLTR
Sbjct: 10 MRELRIRKLCLNICVGESGDRLTR 33
>UNIPROTKB|F1LVT8 [details] [associations]
symbol:F1LVT8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 GeneTree:ENSGT00390000013411
IPI:IPI00367378 Ensembl:ENSRNOT00000005511 Uniprot:F1LVT8
Length = 169
Score = 218 (81.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTKED 224
+GNFGFGIQ DLG+KYDPSI YGL+FYVVL RP F++A ++ +TG +G +HR+ KE+
Sbjct: 96 TGNFGFGIQ---DLGLKYDPSIETYGLEFYVVLFRPDFSIADKKCRTGCIGAKHRINKEE 152
Query: 225 AMKWFQTK 232
AM+ FQ K
Sbjct: 153 AMRLFQQK 160
Score = 120 (47.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 36/64 (56%), Positives = 41/64 (64%)
Query: 52 EVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRNPGERASSF 109
E+ I KL L+ICVGES D LT A KVLE LT + VF ARYT RS G RRN SS
Sbjct: 9 ELCICKLFLSICVGESRDGLTWAVKVLEHLTERTRVFFIARYTVRSFGIRRNELLFISSS 68
Query: 110 MKPL 113
M+ +
Sbjct: 69 MESI 72
Score = 59 (25.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 3 EVKIRKLCLNICVGESGDRLT 23
E+ I KL L+ICVGES D LT
Sbjct: 9 ELCICKLFLSICVGESRDGLT 29
>UNIPROTKB|F1LZM9 [details] [associations]
symbol:F1LZM9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 IPI:IPI00388941
Ensembl:ENSRNOT00000037860 Uniprot:F1LZM9
Length = 161
Score = 184 (69.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 39/89 (43%), Positives = 57/89 (64%)
Query: 142 VTERELDHLNQKIHKAQSLCLHHSGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG 201
+ E+ L ++ K SL SGN G GIQEHIDL SIG + LDF +VLGRP
Sbjct: 72 ILEKVLKIQEYELQKNNSL---DSGNIGCGIQEHIDLD-----SIGTHRLDFNMVLGRPS 123
Query: 202 FNVAHRRRKTGIVGFQHRLTKEDAMKWFQ 230
F ++ ++R+TG + +HR++K++ M+WFQ
Sbjct: 124 FTISGKKRRTGCIVAKHRISKDETMRWFQ 152
Score = 106 (42.4 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 29/56 (51%), Positives = 35/56 (62%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARY-TRSKG-RRN 101
N MRE+ I K CLNICV E+ KVLEQ GQ +FSK +Y T+S G +RN
Sbjct: 8 NTMRELHIYKPCLNICVRET--------KVLEQFNGQIRIFSKEKYITKSFGIKRN 55
Score = 59 (25.8 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 1 MREVKIRKLCLNICVGES 18
MRE+ I K CLNICV E+
Sbjct: 10 MRELHIYKPCLNICVRET 27
>UNIPROTKB|F6XQS3 [details] [associations]
symbol:F6XQS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 Pfam:PF00281
PIRSF:PIRSF002161 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 GeneTree:ENSGT00390000013411
Ensembl:ENSCAFT00000036018 EMBL:AAEX03009970 Uniprot:F6XQS3
Length = 164
Score = 163 (62.4 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQ-LTGQQPVFSKARYT-RSKG-RRN 101
N M+E+ I +LCLNICV E + LT+AAKVLEQ LTGQ PVFSKARYT RS G +RN
Sbjct: 10 NPMQELCIHQLCLNICVQEFRESLTQAAKVLEQQLTGQTPVFSKARYTVRSFGIKRN 66
Score = 87 (35.7 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 150 LNQKIHKAQSLCLHHSGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRR 209
L K+ + + L +GNFG GIQEHI + D + + + + V P ++ ++
Sbjct: 84 LGLKVQEYE-LNFFDTGNFGLGIQEHI---WESDMTQALVSMAWISVWYYPVLSITDKQH 139
Query: 210 KTGIVGFQHRLTK 222
+TG VG HR+ K
Sbjct: 140 RTGCVGTSHRMGK 152
Score = 64 (27.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
M+E+ I +LCLNICV E + LT+
Sbjct: 12 MQELCIHQLCLNICVQEFRESLTQ 35
>UNIPROTKB|E2R6N0 [details] [associations]
symbol:E2R6N0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002132
Pfam:PF00281 PIRSF:PIRSF002161 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 Ensembl:ENSCAFT00000036018
Uniprot:E2R6N0
Length = 167
Score = 163 (62.4 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQ-LTGQQPVFSKARYT-RSKG-RRN 101
N M+E+ I +LCLNICV E + LT+AAKVLEQ LTGQ PVFSKARYT RS G +RN
Sbjct: 10 NPMQELCIHQLCLNICVQEFRESLTQAAKVLEQQLTGQTPVFSKARYTVRSFGIKRN 66
Score = 86 (35.3 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 165 SGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGIVGFQHRLTK 222
+GNFG GIQEHI + D + + + + V P ++ ++ +TG VG HR+ K
Sbjct: 101 TGNFGLGIQEHI---WESDMTQALVSMAWISVWYYPVLSITDKQHRTGCVGTSHRMGK 155
Score = 64 (27.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
M+E+ I +LCLNICV E + LT+
Sbjct: 12 MQELCIHQLCLNICVQEFRESLTQ 35
>UNIPROTKB|F1M7C1 [details] [associations]
symbol:F1M7C1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 PROSITE:PS00358 GO:GO:0006605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0042273
GO:GO:0006364 GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 IPI:IPI00781571
Ensembl:ENSRNOT00000060517 Uniprot:F1M7C1
Length = 123
Score = 192 (72.6 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 44/56 (78%), Positives = 47/56 (83%)
Query: 48 NVMREVKIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT-RSKG-RRN 101
N MRE++IRKLCLNICVGES RL RAAKVLEQLTGQ P+FSKARYT RS RRN
Sbjct: 5 NPMRELRIRKLCLNICVGES-TRLARAAKVLEQLTGQTPMFSKARYTVRSFDIRRN 59
Score = 91 (37.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 1 MREVKIRKLCLNICVGESGDRLTR 24
MRE++IRKLCLNICVGES RL R
Sbjct: 7 MRELRIRKLCLNICVGES-TRLAR 29
Score = 43 (20.2 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 195 VVLGRPGFNV 204
+VLGRPGF++
Sbjct: 113 MVLGRPGFSI 122
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.142 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 197 0.00082 111 3 11 22 0.40 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 589 (63 KB)
Total size of DFA: 156 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.73u 0.07s 14.80t Elapsed: 00:00:15
Total cpu time: 14.74u 0.07s 14.81t Elapsed: 00:00:15
Start: Thu Aug 15 13:48:52 2013 End: Thu Aug 15 13:49:07 2013