BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16161
(387 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 53/220 (24%)
Query: 154 PFGQQAETTLATNFFALVTVCHMLFPLLRPHARVVNVASQYGM-LYKVPSQELKQTLLND 212
PF QAE T+ TNFF VC L PL++P RVVNV+S + K S EL+Q ++
Sbjct: 101 PFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160
Query: 213 SLTEDQLVGMMHDYVKLAKEGKDQEAGWPDDPYTVSKVGVIKLSFIQHATLSKDQTRPDI 272
++TE++LVG+M+ +V+ K+G Q+ GWP Y V+K+GV LS I LS+ + I
Sbjct: 161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKI 220
Query: 273 IVNAVHPGYVNTDLTGHKGILTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPG 332
++NA PG+V TD+ G K AT S +
Sbjct: 221 LLNACCPGWVRTDMAGPK----------------------ATKSPE-------------- 244
Query: 333 YVNTDLTGHKGILTTEQGSVSSVKGALIPPDAKEPRGQFI 372
+G+ + V AL+PPDA+ P GQF+
Sbjct: 245 ----------------EGAETPVYLALLPPDAEGPHGQFV 268
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 54/229 (23%)
Query: 154 PFGQQAETTLATNFFALVTVCHMLFPLLRPHARVVNVAS-QYGMLYKVPSQELKQTLLND 212
PF +AE TL TNFFA +C+ L P+++PH RVVN++S Q ++ S++L++ ++
Sbjct: 99 PFDIKAEMTLKTNFFATRNMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHSE 158
Query: 213 SLTEDQLVGMMHDYVKLAKEGKDQEAGWPDDPYTVSKVGVIKLSFIQHATLSKDQTRPDI 272
+LTE LV +M +V+ K + GWP+ PY VSK+GV LS I L + + I
Sbjct: 159 TLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRI 218
Query: 273 IVNAVHPGYVNTDLTGHKGILTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPG 332
+VNA PG V TD+ G I T+
Sbjct: 219 LVNACCPGPVKTDMDGKDSIRTV------------------------------------- 241
Query: 333 YVNTDLTGHKGILTTEQGSVSSVKGALIPPDAKEPRGQFIWYDGSIVDW 381
E+G+ + V AL+PPDA EP+GQ + +D + +W
Sbjct: 242 ---------------EEGAETPVYLALLPPDATEPQGQLV-HDKVVQNW 274
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 53/220 (24%)
Query: 154 PFGQQAETTLATNFFALVTVCHMLFPLLRPHARVVNVASQYGM-LYKVPSQELKQTLLND 212
PF QAE T+ TNFF V L PL++P RVVNV+S + K S EL+Q ++
Sbjct: 101 PFHIQAEVTMKTNFFGTRDVXTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160
Query: 213 SLTEDQLVGMMHDYVKLAKEGKDQEAGWPDDPYTVSKVGVIKLSFIQHATLSKDQTRPDI 272
++TE++LVG+M+ +V+ K+G Q+ GWP Y V+K+GV LS I LS+ + I
Sbjct: 161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKI 220
Query: 273 IVNAVHPGYVNTDLTGHKGILTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPG 332
++NA PG+V TD+ G K AT S +
Sbjct: 221 LLNACCPGWVRTDMAGPK----------------------ATKSPE-------------- 244
Query: 333 YVNTDLTGHKGILTTEQGSVSSVKGALIPPDAKEPRGQFI 372
+G+ + V AL+PPDA+ P GQF+
Sbjct: 245 ----------------EGAETPVYLALLPPDAEGPHGQFV 268
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 56/235 (23%)
Query: 154 PFGQQAETTLATNFFALVTVCHMLFPLLRPHARVVNVASQYGM-LYKVPSQELKQTLLND 212
PF QAE T+ TNF VC L PL++P RVVNV+S G+ S EL+Q ++
Sbjct: 101 PFHIQAELTMKTNFMGTRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSE 160
Query: 213 SLTEDQLVGMMHDYVKLAKEGKDQEAGWPDDPYTVSKVGVIKLSFIQHATLSKDQTRPDI 272
++TE++LVG+M+ +V+ K G ++ GW D Y V+K+GV LS I L + + I
Sbjct: 161 TITEEELVGLMNKFVEDTKNGVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKI 220
Query: 273 IVNAVHPGYVNTDLTGHKGILTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPG 332
++NA PG+V TD+ G K P+ V A P
Sbjct: 221 LLNACCPGWVRTDMGGPKA---------------------------PKSPE--VGAETPV 251
Query: 333 YVNTDLTGHKGILTTEQGSVSSVKGALIPPDAKEPRGQFIWYDGSIVDWNAVSPP 387
Y+ AL+P DA+ P GQF+ D +V+W PP
Sbjct: 252 YL-----------------------ALLPSDAEGPHGQFV-TDKKVVEWGV--PP 280
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 157 QQAETTLATNFFALVTVCHMLFPLLR--PHARVVNVASQYGMLYKVPSQELKQTLLN-DS 213
+ AE L N+ + +V +L PLL+ R+VNV+S G L V ++ + L + D+
Sbjct: 143 ELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDA 202
Query: 214 LTEDQLVGMMHDYVKLAKEGKDQEAGWPD--DPYTVSKVGVIKLSFIQHATLSKDQTRPD 271
LTE+++ +++ +K KE + GWP YT SK + + + + K Q
Sbjct: 203 LTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQ---- 258
Query: 272 IIVNAVHPGYVNTDL 286
VN V PG V T++
Sbjct: 259 --VNCVCPGLVKTEM 271
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 322 PDIIVNAVHPGYVNTDLTGHKGILTTEQGSVSSVKGALIPPDAKEPRGQFIWYDGS 377
P VN V PG V T++ G T E+G+ V+ AL P D P G F YD S
Sbjct: 255 PKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDG--PSGFF--YDCS 306
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y+ +K GVI L+ T++K+ I VNAV PG++ TD+T
Sbjct: 178 YSAAKAGVIGLT----KTVAKELASRGITVNAVAPGFIATDMT 216
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 21/93 (22%)
Query: 301 KVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKGILTTEQ----------G 350
K GVI L+ T++K+ I VNAV PG++ TD+T L E+ G
Sbjct: 182 KAGVIGLT----KTVAKELASRGITVNAVAPGFIATDMTSE---LAAEKLLEVIPLGRYG 234
Query: 351 SVSSVKGAL----IPPDAKEPRGQFIWYDGSIV 379
+ V G + P A GQ I DG +V
Sbjct: 235 EAAEVAGVVRFLAADPAAAYITGQVINIDGGLV 267
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y SK GVI ++ +++++ ++ ++ N V PGY++TD+T
Sbjct: 153 YAASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 301 KVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
K GVI ++ +++++ ++ ++ N V PGY++TD+T
Sbjct: 157 KAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y SK GVI ++ +++++ ++ ++ N V PGY++TD+T
Sbjct: 153 YAASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 301 KVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
K GVI ++ +++++ ++ ++ N V PGY++TD+T
Sbjct: 157 KAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y SK GVI ++ +++++ ++ ++ N V PGY++TD+T
Sbjct: 173 YAASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 211
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 301 KVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
K GVI ++ +++++ ++ ++ N V PGY++TD+T
Sbjct: 177 KAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 211
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 24/97 (24%)
Query: 210 LNDSLTED----QLVGMMHDYVKLAKEGKDQEAGWPD----------------DPYTVSK 249
L+D+L D L G+ ++ + G +EAGW PYT SK
Sbjct: 120 LDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK 179
Query: 250 VGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
GV+ + ++ + + I VNAV PGYV T +
Sbjct: 180 HGVVGFT----KSVGFELAKTGITVNAVCPGYVETPM 212
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y+ SK GVI + +L+K+ +I VNA+ PG++++D+T
Sbjct: 193 YSSSKAGVIGFT----KSLAKELASRNITVNAIAPGFISSDMT 231
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 286 LTGHKGILTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
LTG+ G + K GVI + +L+K+ +I VNA+ PG++++D+T
Sbjct: 184 LTGNVG--QANYSSSKAGVIGFT----KSLAKELASRNITVNAIAPGFISSDMT 231
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y+ +K G+I + +L+K+ +++VNAV PG++ TD+T
Sbjct: 157 YSTTKAGLIGFT----KSLAKELAPRNVLVNAVAPGFIETDMT 195
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 299 TLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
T K G+I + +L+K+ +++VNAV PG++ TD+T
Sbjct: 159 TTKAGLIGFT----KSLAKELAPRNVLVNAVAPGFIETDMT 195
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y +K GVI L+ T +K+ +I VNA+ PG++ TD+T
Sbjct: 154 YVAAKAGVIGLT----KTSAKELASRNITVNAIAPGFIATDMT 192
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 301 KVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
K GVI L+ T +K+ +I VNA+ PG++ TD+T
Sbjct: 158 KAGVIGLT----KTSAKELASRNITVNAIAPGFIATDMT 192
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKGI 292
Y SK GV LS + L D+ R VN+VHPG T +T GI
Sbjct: 151 YGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGI 194
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 293 LTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKGI 344
LT + K GV LS + L D+ R VN+VHPG T +T GI
Sbjct: 147 LTSSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGI 194
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKGI 292
Y SK GV LS + L D+ R VN+VHPG T +T GI
Sbjct: 151 YGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGI 194
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 293 LTMTIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKGI 344
LT + K GV LS + L D+ R VN+VHPG T +T GI
Sbjct: 147 LTSSYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGI 194
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKGILTMTIHTLK 301
Y SK GV L +L+ + R +I VN+V+PG VNT++ ++ +L M + L+
Sbjct: 208 YAASKHGVQGLML----SLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLE 260
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y +K G+I S +L+++ I VN V PG++ TD+T
Sbjct: 151 YAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMT 189
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 238 AGWPDDP-YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
AG P Y SK G+I ++ +LS + I VNAV PG++ +D+T
Sbjct: 148 AGNPGQANYCASKAGLIGMT----KSLSYEVATRGITVNAVAPGFIKSDMT 194
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y SK G+I + ++K+ + I VNAV PG++ T++T
Sbjct: 152 YVASKAGLIGFT----RAVAKEYAQRGITVNAVAPGFIETEMT 190
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 263 LSKDQTRPDIIVNAVHPGYVNTDLTGH 289
L+ + I VNA+ PGYVNTD T H
Sbjct: 186 LAAEWASAGIRVNALSPGYVNTDQTAH 212
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 315 LSKDQTRPDIIVNAVHPGYVNTDLTGH 341
L+ + I VNA+ PGYVNTD T H
Sbjct: 186 LAAEWASAGIRVNALSPGYVNTDQTAH 212
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 176 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 214
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 176 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 214
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 176 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 214
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 176 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 214
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 172 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 210
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLTGHKG 291
Y +K GVI S T +++ +I VN V PG++ +D+T G
Sbjct: 151 YAAAKAGVIGFS----KTAAREGASRNINVNVVCPGFIASDMTAKLG 193
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 172 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 210
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 156 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPM 194
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
+ +K G+I S +L+++ I VN V PG++ TD+T
Sbjct: 151 FAAAKAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMT 189
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PY+ SK GV+ + L + R I VNAV PG+V T +
Sbjct: 176 PYSASKHGVVGFT----KALGLELARTGITVNAVCPGWVETPM 214
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 319 QTRPDIIVNAVHPGYVNTDLTGHKGILTTEQGSVSSVKGA-----LIP----PDAKEPRG 369
+ P + VN V PG +NTDL G + +EQ S+SSV A ++P P +E G
Sbjct: 172 ELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQ-SISSVPLADMLKSVLPIGRMPALEEYTG 230
Query: 370 QFIWY 374
++++
Sbjct: 231 AYVFF 235
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y +K GVI + +++++ + VN V PG++ TD+T
Sbjct: 158 YAAAKAGVIGFT----KSMAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y +K GVI + +++++ + VN V PG++ TD+T
Sbjct: 158 YAAAKAGVIGFT----KSMAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y +K GVI + +++++ + VN V PG++ TD+T
Sbjct: 158 YAAAKAGVIGFT----KSMAREVASRGVTVNTVAPGFIETDMT 196
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y SK G++ + +L+++ +I N V PG+V+TD+T
Sbjct: 159 YAASKAGLVGFA----RSLARELGSRNITFNVVAPGFVDTDMT 197
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y +K GVI L+ + +++ I VNAV PG++ +D+T
Sbjct: 160 YVATKAGVIGLT----KSAARELASRGITVNAVAPGFIVSDMT 198
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 49/164 (29%)
Query: 184 HARVVNVASQYGMLYKVPSQELKQTLLNDS-LTEDQLVGMMHDYVKLAKEGKDQEAGWPD 242
A + V SQ+G L L+N++ +T D L+ M K+QE W D
Sbjct: 76 KAMIKEVVSQFGSL---------DVLVNNAGITRDNLLMRM----------KEQE--W-D 113
Query: 243 DPYTVSKVGVIKLSFIQHATLSKDQTRPDIIVN------AV-HPGYVNTDLTGHKGILTM 295
D + GV + IQ AT + R I+N AV +PG N T
Sbjct: 114 DVIDTNLKGV--FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT-------- 163
Query: 296 TIHTLKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 339
K GVI L+ + +++ I VNAV PG++ +D+T
Sbjct: 164 -----KAGVIGLT----KSAARELASRGITVNAVAPGFIVSDMT 198
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
Y SK V+ L+ L+ Q R VN+V PGY+ T+L
Sbjct: 184 YCTSKAAVVHLTKAMAVELAPHQIR----VNSVSPGYIRTEL 221
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PYT +K G+ L+ +++ + + +I NA+ PGY+ TD+
Sbjct: 158 PYTAAKGGIKMLT----CSMAAEWAQFNIQTNAIGPGYILTDM 196
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNT 284
Y SK G++ F + A L+ + + +NA+ PG+VNT
Sbjct: 153 YCASKHGIV--GFTRSAALAANLMNSGVRLNAICPGFVNT 190
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
YT SK V L+ A L K R VN+VHPG VNT +
Sbjct: 174 YTASKHAVTGLARAFAAELGKHSIR----VNSVHPGPVNTPM 211
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 214 LTEDQLVGMMHDYVKLAKEGKDQEAGWPD-DPYTVSKVGVIKLSFIQHATLSKDQTRPDI 272
L D+L+ + +A Q PD + Y +K G++ L+ +L PD+
Sbjct: 116 LCRDELIKNKGRIINIASTRAFQSE--PDSEAYASAKGGIVALTHALAMSLG-----PDV 168
Query: 273 IVNAVHPGYVNT 284
+VN + PG++N
Sbjct: 169 LVNCIAPGWINV 180
>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster
Length = 267
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 314 TLSKDQTRPDIIVNAVHPGYVNTDLTGHKGILT--TEQGSVSSVKGALIPPDAKEPRGQF 371
+LS D I ++HPG+V TD G L T G + L ++ G F
Sbjct: 202 SLSVDLYPQRIXCVSLHPGWVKTDXGGSSAPLDVPTSTGQIVQTISKL----GEKQNGGF 257
Query: 372 IWYDGSIVDW 381
+ YDG+ + W
Sbjct: 258 VNYDGTPLAW 267
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
Y +K GV + + LSK+ DI VNAV PG TDL
Sbjct: 175 YAAAKAGVEAXTHV----LSKELRGRDITVNAVAPGPTATDL 212
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 244 PYTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDL 286
PYTV+K G+ L+ ++ + + I NA+ PGY+ TD+
Sbjct: 174 PYTVAKGGIKMLT----RAMAAEWAQYGIQANAIGPGYMLTDM 212
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 245 YTVSKVGVIKLSFIQHATLSKDQTRPDIIVNAVHPGYVNTDLT 287
Y SK G+I + +++K+ I NAV PG + TD+T
Sbjct: 155 YAASKAGLIGFT----KSIAKEFAAKGIYCNAVAPGIIKTDMT 193
>pdb|2QLA|A Chain A, Crystal Structure Of A 16-Helix Bundle Architecture
Produced By The Zinc-Mediated Self Assembly Of Four
Cytochrome Cb562 Molecules
pdb|2QLA|B Chain B, Crystal Structure Of A 16-Helix Bundle Architecture
Produced By The Zinc-Mediated Self Assembly Of Four
Cytochrome Cb562 Molecules
pdb|2QLA|C Chain C, Crystal Structure Of A 16-Helix Bundle Architecture
Produced By The Zinc-Mediated Self Assembly Of Four
Cytochrome Cb562 Molecules
pdb|2QLA|D Chain D, Crystal Structure Of A 16-Helix Bundle Architecture
Produced By The Zinc-Mediated Self Assembly Of Four
Cytochrome Cb562 Molecules
pdb|3DE8|A Chain A, Crystal Structure Of A Dimeric Cytochrome Cb562 Assembly
Induced By Copper Coordination
pdb|3DE8|B Chain B, Crystal Structure Of A Dimeric Cytochrome Cb562 Assembly
Induced By Copper Coordination
pdb|3DE8|C Chain C, Crystal Structure Of A Dimeric Cytochrome Cb562 Assembly
Induced By Copper Coordination
pdb|3DE8|D Chain D, Crystal Structure Of A Dimeric Cytochrome Cb562 Assembly
Induced By Copper Coordination
pdb|3DE9|A Chain A, Crystal Structure Of A Trimeric Cytochrome Cb562 Assembly
Induced By Nickel Coordination
Length = 106
Score = 28.5 bits (62), Expect = 7.4, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 217 DQLVGMMHDYVKLAKEGKDQEA 238
D LVG +HD + LA EGK +EA
Sbjct: 66 DILVGQIHDALHLANEGKVKEA 87
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,673,638
Number of Sequences: 62578
Number of extensions: 425220
Number of successful extensions: 1339
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1274
Number of HSP's gapped (non-prelim): 93
length of query: 387
length of database: 14,973,337
effective HSP length: 101
effective length of query: 286
effective length of database: 8,652,959
effective search space: 2474746274
effective search space used: 2474746274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)