BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16163
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50238|CRIP1_HUMAN Cysteine-rich protein 1 OS=Homo sapiens GN=CRIP1 PE=1 SV=3
Length = 77
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 12 HKGVPYCHVPCYGALFGPQLFGHGTRVESHT 42
H+G PYC+ PCY A+FGP+ FG G ESHT
Sbjct: 46 HEGKPYCNHPCYAAMFGPKGFGRGG-AESHT 75
>sp|Q56K04|CRIP1_BOVIN Cysteine-rich protein 1 OS=Bos taurus GN=CRIP1 PE=3 SV=3
Length = 77
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 12 HKGVPYCHVPCYGALFGPQLFGHGTRVESHT 42
H+G PYC+ PCY A+FGP+ FG G ESHT
Sbjct: 46 HEGKPYCNHPCYAAMFGPKGFGRGG-AESHT 75
>sp|P63255|CRIP1_RAT Cysteine-rich protein 1 OS=Rattus norvegicus GN=Crip1 PE=1 SV=2
Length = 77
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 12 HKGVPYCHVPCYGALFGPQLFGHGTRVESHT 42
H+G PYC+ PCY A+FGP+ FG G ESHT
Sbjct: 46 HEGKPYCNHPCYSAMFGPKGFGRGG-AESHT 75
>sp|P63254|CRIP1_MOUSE Cysteine-rich protein 1 OS=Mus musculus GN=Crip1 PE=2 SV=2
Length = 77
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 12 HKGVPYCHVPCYGALFGPQLFGHGTRVESHT 42
H+G PYC+ PCY A+FGP+ FG G ESHT
Sbjct: 46 HEGKPYCNHPCYSAMFGPKGFGRGG-AESHT 75
>sp|Q6Q6R5|CRIP3_HUMAN Cysteine-rich protein 3 OS=Homo sapiens GN=CRIP3 PE=2 SV=2
Length = 217
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/19 (84%), Positives = 17/19 (89%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H GVPYCHVPCYG LFGP+
Sbjct: 166 HDGVPYCHVPCYGYLFGPK 184
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYGALFGP+
Sbjct: 47 HNGRPYCHKPCYGALFGPR 65
>sp|Q6Q6R3|CRIP3_MOUSE Cysteine-rich protein 3 OS=Mus musculus GN=Crip3 PE=2 SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G+PYCH+PCYG LFGP+
Sbjct: 165 HDGMPYCHIPCYGYLFGPK 183
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYGALFGP+
Sbjct: 47 HNGRPYCHKPCYGALFGPR 65
>sp|Q9DCT8|CRIP2_MOUSE Cysteine-rich protein 2 OS=Mus musculus GN=Crip2 PE=1 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYG LFGP+
Sbjct: 168 HDGQPYCHKPCYGILFGPK 186
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G P+CH PCY LFGP+
Sbjct: 47 HDGKPFCHKPCYATLFGPK 65
>sp|Q0VFX8|CRIP2_BOVIN Cysteine-rich protein 2 OS=Bos taurus GN=CRIP2 PE=2 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYG LFGP+
Sbjct: 168 HDGQPYCHKPCYGILFGPK 186
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G P+CH PCY LFGP+
Sbjct: 47 HDGKPFCHKPCYATLFGPK 65
>sp|P36201|CRIP2_RAT Cysteine-rich protein 2 OS=Rattus norvegicus GN=Crip2 PE=2 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYG LFGP+
Sbjct: 168 HDGQPYCHKPCYGILFGPK 186
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G P+CH PCY LFGP+
Sbjct: 47 HDGKPFCHKPCYATLFGPK 65
>sp|P52943|CRIP2_HUMAN Cysteine-rich protein 2 OS=Homo sapiens GN=CRIP2 PE=1 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYG LFGP+
Sbjct: 168 HDGQPYCHKPCYGILFGPK 186
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G P+CH PCY LFGP+
Sbjct: 47 HDGKPFCHKPCYATLFGPK 65
>sp|Q5R7Y1|CRIP2_PONAB Cysteine-rich protein 2 OS=Pongo abelii GN=CRIP2 PE=2 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G PYCH PCYG LFGP+
Sbjct: 168 HDGQPYCHKPCYGILFGPK 186
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 12 HKGVPYCHVPCYGALFGPQ 30
H G P+CH PCY LFGP+
Sbjct: 47 HDGKPFCHKPCYATLFGPK 65
>sp|Q3B7D5|RASF2_RAT Ras association domain-containing protein 2 OS=Rattus norvegicus
GN=Rassf2 PE=2 SV=1
Length = 326
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 51 PCGSN--MPRSHLESKLNLYNQYYDGKSGEIRSRE 83
PCG + MP+S L L YN YY+G++ ++R RE
Sbjct: 11 PCGQDKYMPKSELLLHLKTYNLYYEGQNLQLRHRE 45
>sp|Q8BMS9|RASF2_MOUSE Ras association domain-containing protein 2 OS=Mus musculus
GN=Rassf2 PE=2 SV=1
Length = 326
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 51 PCGSN--MPRSHLESKLNLYNQYYDGKSGEIRSRE 83
PCG + MP+S L L YN YY+G++ ++R RE
Sbjct: 11 PCGQDKYMPKSELLLHLKTYNLYYEGQNLQLRHRE 45
>sp|Q9J5S2|DPOL_HBVOR Protein P OS=Orangutan hepatitis B virus (isolate Somad) GN=P PE=3
SV=1
Length = 832
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 30 QLFGHGTRVESHTSFGKVENKPCGSNMPRSHLESKLNLYNQY------YDGKSGEIRSR 82
Q HG H FG + G +P H +S+L L +Q + G+SG I +R
Sbjct: 177 QELQHGAEPFCHQPFGILPRASIGPAVPSQHKQSRLGLQSQQGHLARSHQGRSGSIWAR 235
>sp|Q54WZ0|CDC5L_DICDI Cell division cycle 5-like protein OS=Dictyostelium discoideum
GN=cdc5l PE=3 SV=1
Length = 800
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 44 FGKVENKPCGSNMPRSHLESKLNLYNQYYDGKSGEI 79
+ K NK S+M +LE KLN+YN Y +S I
Sbjct: 691 YDKTLNKIKNSSMKSVNLEKKLNIYNGGYQNRSNTI 726
>sp|Q09SZ7|ENV_HTL3P Envelope glycoprotein gp63 OS=Human T-cell leukemia virus 3
(strain Pyl43) GN=env PE=3 SV=1
Length = 493
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 17 YCHVPCYGALFGPQLFGHGTRVESHTSFGKVENKPCGSNMPR 58
Y + C+ LF P FG+ +R + PCGSN PR
Sbjct: 7 YFSLICFYTLF-PSSFGNPSRCTLFIGASSYHSDPCGSNHPR 47
>sp|Q0WV13|GAUTD_ARATH Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana
GN=GAUT13 PE=2 SV=1
Length = 533
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 11 THKGVPYCH-VPCYGALFGPQLFGHGTRVESH--TSFGKVENK------PCGSNMPRSHL 61
T +GV C C+G GP+L G E F K+ N+ P G +P S
Sbjct: 60 TLEGVNKCSSFDCFGRRLGPRLLGRIDDSEQRLVRDFYKILNEVSTQEIPDGLKLPESFS 119
Query: 62 ESKLNLYNQYYDGKS 76
+ ++ N +YD K+
Sbjct: 120 QLVSDMKNNHYDAKT 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,564,452
Number of Sequences: 539616
Number of extensions: 1249716
Number of successful extensions: 2223
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2202
Number of HSP's gapped (non-prelim): 29
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)