Query psy16164
Match_columns 214
No_of_seqs 211 out of 2315
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 22:25:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16164.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16164hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1177|consensus 99.7 5.1E-16 1.1E-20 133.6 11.9 102 55-164 49-150 (596)
2 PTZ00342 acyl-CoA synthetase; 99.6 5.7E-15 1.2E-19 137.7 13.0 121 65-188 63-206 (746)
3 PLN02614 long-chain acyl-CoA s 99.6 6.8E-15 1.5E-19 136.0 12.7 88 74-163 57-151 (666)
4 PLN02861 long-chain-fatty-acid 99.6 6.9E-15 1.5E-19 135.7 12.1 88 74-163 55-149 (660)
5 PTZ00237 acetyl-CoA synthetase 99.6 7.2E-15 1.6E-19 135.3 11.0 87 75-163 74-164 (647)
6 PTZ00216 acyl-CoA synthetase; 99.6 3.2E-14 6.8E-19 132.2 12.1 95 67-163 73-193 (700)
7 KOG1256|consensus 99.6 6.1E-14 1.3E-18 126.5 13.4 141 61-203 73-246 (691)
8 PLN02654 acetate-CoA ligase 99.6 2.3E-14 4.9E-19 132.5 10.8 87 75-163 102-192 (666)
9 PF00501 AMP-binding: AMP-bind 99.6 2.5E-14 5.3E-19 124.2 10.5 88 73-163 6-93 (417)
10 PLN02387 long-chain-fatty-acid 99.5 4E-14 8.6E-19 131.5 12.3 82 89-172 106-189 (696)
11 PLN03102 acyl-activating enzym 99.5 7.8E-14 1.7E-18 126.8 13.9 86 74-163 26-111 (579)
12 TIGR02316 propion_prpE propion 99.5 3E-14 6.6E-19 130.6 10.9 88 74-163 64-155 (628)
13 PLN02860 o-succinylbenzoate-Co 99.5 3.3E-14 7.2E-19 128.7 10.7 86 74-163 19-104 (563)
14 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 3.1E-14 6.7E-19 130.4 10.5 88 74-163 69-160 (625)
15 PLN02736 long-chain acyl-CoA s 99.5 1.2E-13 2.6E-18 127.3 14.4 88 74-163 56-150 (651)
16 PLN02430 long-chain-fatty-acid 99.5 6.3E-14 1.4E-18 129.4 12.6 88 74-163 54-148 (660)
17 COG0318 CaiC Acyl-CoA syntheta 99.5 5E-14 1.1E-18 127.1 11.1 88 74-163 23-110 (534)
18 PLN03052 acetate--CoA ligase; 99.5 5.7E-14 1.2E-18 131.0 11.6 88 74-163 187-280 (728)
19 PRK07788 acyl-CoA synthetase; 99.5 1.6E-13 3.4E-18 123.7 13.6 86 74-163 61-146 (549)
20 PRK10524 prpE propionyl-CoA sy 99.5 8.4E-14 1.8E-18 127.6 11.0 88 74-163 65-156 (629)
21 PRK12582 acyl-CoA synthetase; 99.5 2E-13 4.2E-18 125.2 13.2 90 74-163 61-157 (624)
22 PRK08180 feruloyl-CoA synthase 99.5 2.1E-13 4.5E-18 124.8 13.2 88 74-163 51-146 (614)
23 PRK05857 acyl-CoA synthetase; 99.5 2.1E-13 4.5E-18 122.9 12.7 88 74-163 26-113 (540)
24 PRK00174 acetyl-CoA synthetase 99.5 1.1E-13 2.5E-18 127.0 10.9 88 74-163 79-170 (637)
25 PRK05852 acyl-CoA synthetase; 99.5 2.2E-13 4.8E-18 122.4 12.1 88 74-163 28-115 (534)
26 PRK13382 acyl-CoA synthetase; 99.5 1.7E-13 3.6E-18 123.4 11.1 86 74-163 55-140 (537)
27 PRK07798 acyl-CoA synthetase; 99.5 6E-13 1.3E-17 118.8 14.1 86 74-163 15-100 (533)
28 PRK09274 peptide synthase; Pro 99.5 2E-13 4.4E-18 123.0 10.9 88 74-163 18-113 (552)
29 PRK13390 acyl-CoA synthetase; 99.5 2.7E-13 5.8E-18 120.8 11.3 88 74-163 9-96 (501)
30 PRK13295 cyclohexanecarboxylat 99.5 4.5E-13 9.7E-18 120.8 12.7 88 74-163 36-127 (547)
31 PRK06155 crotonobetaine/carnit 99.5 8.4E-13 1.8E-17 119.1 14.0 86 74-163 33-118 (542)
32 PRK06087 short chain acyl-CoA 99.5 4.7E-13 1E-17 120.5 12.3 87 74-163 35-121 (547)
33 PLN02246 4-coumarate--CoA liga 99.5 8.3E-13 1.8E-17 118.7 13.8 88 74-163 35-122 (537)
34 PLN02479 acetate-CoA ligase 99.5 5.3E-13 1.2E-17 120.9 12.3 86 74-163 32-117 (567)
35 PRK03584 acetoacetyl-CoA synth 99.5 3.8E-13 8.3E-18 123.9 11.3 88 74-163 96-186 (655)
36 TIGR01217 ac_ac_CoA_syn acetoa 99.5 3.9E-13 8.4E-18 124.0 11.2 87 75-163 97-186 (652)
37 PRK12583 acyl-CoA synthetase; 99.5 1.1E-12 2.4E-17 118.1 13.9 88 74-163 30-117 (558)
38 PRK05605 long-chain-fatty-acid 99.5 6.5E-13 1.4E-17 120.3 12.4 86 74-163 44-129 (573)
39 PRK05677 long-chain-fatty-acid 99.5 4.2E-13 9E-18 121.4 10.9 86 74-163 36-122 (562)
40 PRK13388 acyl-CoA synthetase; 99.5 1E-12 2.3E-17 118.4 13.5 85 75-163 14-99 (540)
41 PLN02330 4-coumarate--CoA liga 99.5 6.8E-13 1.5E-17 119.6 11.9 88 74-163 40-127 (546)
42 TIGR03089 conserved hypothetic 99.4 4.3E-13 9.3E-18 108.5 9.4 74 73-146 7-85 (227)
43 PLN02574 4-coumarate--CoA liga 99.4 1.1E-12 2.3E-17 118.8 12.9 89 73-163 50-139 (560)
44 PRK08315 AMP-binding domain pr 99.4 1.4E-12 3.1E-17 117.5 13.6 88 74-163 28-115 (559)
45 PTZ00297 pantothenate kinase; 99.4 1.6E-12 3.4E-17 127.5 14.8 111 74-188 439-554 (1452)
46 PRK13383 acyl-CoA synthetase; 99.4 5.6E-13 1.2E-17 119.3 10.9 86 74-163 47-132 (516)
47 PRK04319 acetyl-CoA synthetase 99.4 8.8E-13 1.9E-17 119.5 12.1 88 74-163 56-145 (570)
48 PRK07529 AMP-binding domain pr 99.4 6E-13 1.3E-17 122.3 11.2 87 74-163 37-129 (632)
49 PRK06060 acyl-CoA synthetase; 99.4 5.8E-13 1.3E-17 123.7 10.9 84 75-163 19-102 (705)
50 PRK08008 caiC putative crotono 99.4 1.9E-12 4.2E-17 115.6 13.8 88 74-163 19-109 (517)
51 TIGR03443 alpha_am_amid L-amin 99.4 6.1E-13 1.3E-17 131.7 11.4 88 74-163 248-342 (1389)
52 PRK07868 acyl-CoA synthetase; 99.4 1.8E-12 3.9E-17 124.7 13.8 88 74-168 459-548 (994)
53 PRK03640 O-succinylbenzoic aci 99.4 8.1E-13 1.8E-17 116.9 10.6 86 74-163 14-99 (483)
54 PRK06018 putative acyl-CoA syn 99.4 1.6E-12 3.5E-17 117.1 12.5 88 74-163 22-111 (542)
55 COG0365 Acs Acyl-coenzyme A sy 99.4 1.1E-12 2.3E-17 117.3 11.1 86 75-163 23-112 (528)
56 TIGR03205 pimA dicarboxylate-- 99.4 1.9E-12 4E-17 116.6 12.7 86 74-163 33-118 (541)
57 PRK08314 long-chain-fatty-acid 99.4 2.9E-12 6.3E-17 115.2 13.6 86 74-163 22-108 (546)
58 PRK06334 long chain fatty acid 99.4 1.2E-12 2.6E-17 118.0 11.2 84 74-163 31-114 (539)
59 PRK06164 acyl-CoA synthetase; 99.4 1.9E-12 4.1E-17 116.4 12.1 86 74-163 22-107 (540)
60 PRK06839 acyl-CoA synthetase; 99.4 1E-12 2.2E-17 116.5 10.3 86 74-163 14-100 (496)
61 PRK08279 long-chain-acyl-CoA s 99.4 3.3E-12 7.2E-17 116.4 13.7 86 74-163 49-134 (600)
62 PRK06178 acyl-CoA synthetase; 99.4 4.6E-12 1E-16 114.6 14.5 86 74-163 45-130 (567)
63 COG1022 FAA1 Long-chain acyl-C 99.4 3E-12 6.5E-17 116.1 13.0 88 74-163 28-117 (613)
64 PRK07059 Long-chain-fatty-acid 99.4 3.3E-12 7.2E-17 115.3 13.3 86 74-163 35-120 (557)
65 PRK07514 malonyl-CoA synthase; 99.4 1.8E-12 3.9E-17 115.3 11.3 88 73-163 13-100 (504)
66 PRK07656 long-chain-fatty-acid 99.4 1.5E-12 3.3E-17 115.8 10.5 86 74-163 17-102 (513)
67 PRK08162 acyl-CoA synthetase; 99.4 1.9E-12 4.2E-17 116.4 11.2 86 74-163 30-115 (545)
68 PRK07867 acyl-CoA synthetase; 99.4 3.3E-12 7.2E-17 114.9 12.4 91 75-169 16-109 (529)
69 PRK06710 long-chain-fatty-acid 99.4 3.2E-12 7E-17 115.6 12.3 86 74-163 36-121 (563)
70 PRK07786 long-chain-fatty-acid 99.4 3.8E-12 8.2E-17 114.7 12.5 86 74-163 29-114 (542)
71 PRK12492 long-chain-fatty-acid 99.4 3.6E-12 7.7E-17 115.4 12.2 86 74-163 36-122 (562)
72 PRK05850 acyl-CoA synthetase; 99.4 4E-12 8.6E-17 115.3 12.1 87 74-163 13-109 (578)
73 PRK07638 acyl-CoA synthetase; 99.4 2.3E-12 4.9E-17 114.4 10.2 85 74-163 13-97 (487)
74 PRK06187 long-chain-fatty-acid 99.4 8.3E-12 1.8E-16 111.1 13.8 86 74-163 18-103 (521)
75 PRK06145 acyl-CoA synthetase; 99.4 2.3E-12 5.1E-17 114.5 10.2 86 74-163 14-99 (497)
76 PRK08043 bifunctional acyl-[ac 99.4 2.2E-12 4.7E-17 120.2 10.4 86 74-163 216-302 (718)
77 PRK13391 acyl-CoA synthetase; 99.4 5.4E-12 1.2E-16 112.7 12.6 88 74-163 9-96 (511)
78 PRK09088 acyl-CoA synthetase; 99.4 3.6E-12 7.8E-17 113.1 11.2 88 74-163 7-94 (488)
79 PRK08751 putative long-chain f 99.4 2.7E-12 6E-17 115.9 10.5 86 74-163 37-123 (560)
80 PRK10252 entF enterobactin syn 99.4 3.9E-12 8.5E-17 125.1 12.4 86 74-163 470-555 (1296)
81 PRK12467 peptide synthase; Pro 99.4 2.3E-12 4.9E-17 137.3 11.4 88 72-163 3105-3192(3956)
82 PRK05620 long-chain-fatty-acid 99.4 1.1E-11 2.4E-16 112.5 14.1 88 74-163 22-111 (576)
83 PRK12467 peptide synthase; Pro 99.4 2.1E-12 4.6E-17 137.5 10.7 86 74-163 1586-1671(3956)
84 PRK08316 acyl-CoA synthetase; 99.4 9.6E-12 2.1E-16 110.9 13.3 86 74-163 23-108 (523)
85 TIGR03208 cyc_hxne_CoA_lg cycl 99.4 6.9E-12 1.5E-16 112.8 12.0 88 74-163 34-125 (538)
86 PRK05691 peptide synthase; Val 99.4 2.6E-12 5.7E-17 137.7 10.6 89 71-163 3729-3817(4334)
87 PRK07470 acyl-CoA synthetase; 99.4 9.2E-12 2E-16 111.6 12.5 86 74-163 19-104 (528)
88 TIGR01734 D-ala-DACP-lig D-ala 99.3 6.2E-12 1.3E-16 111.8 11.1 86 74-163 12-97 (502)
89 PRK05691 peptide synthase; Val 99.3 4.9E-12 1.1E-16 135.7 12.2 86 74-163 2200-2285(4334)
90 PRK07008 long-chain-fatty-acid 99.3 4.3E-12 9.3E-17 114.3 9.9 88 74-163 22-111 (539)
91 TIGR02275 DHB_AMP_lig 2,3-dihy 99.3 9E-12 2E-16 111.8 11.9 86 74-163 35-120 (527)
92 TIGR03098 ligase_PEP_1 acyl-Co 99.3 1.6E-11 3.4E-16 109.4 13.3 86 74-163 12-97 (515)
93 PRK12476 putative fatty-acid-- 99.3 1.1E-11 2.4E-16 113.4 12.5 89 74-163 46-142 (612)
94 PRK12316 peptide synthase; Pro 99.3 4.6E-12 1E-16 137.1 11.2 86 74-163 3069-3154(5163)
95 PRK04813 D-alanine--poly(phosp 99.3 7.5E-12 1.6E-16 111.1 10.6 86 74-163 14-99 (503)
96 KOG1179|consensus 99.3 8.6E-12 1.9E-16 109.7 10.6 92 70-163 85-176 (649)
97 PRK12316 peptide synthase; Pro 99.3 8.9E-12 1.9E-16 134.9 12.8 86 74-163 2015-2100(5163)
98 PRK06188 acyl-CoA synthetase; 99.3 1.5E-11 3.3E-16 110.1 12.3 86 74-163 24-109 (524)
99 COG1021 EntE Peptide arylation 99.3 1E-11 2.2E-16 105.4 10.0 89 71-163 37-125 (542)
100 PRK08974 long-chain-fatty-acid 99.3 9.8E-12 2.1E-16 112.3 10.6 86 74-163 35-121 (560)
101 PRK07769 long-chain-fatty-acid 99.3 4.6E-11 9.9E-16 109.7 14.5 89 74-163 33-129 (631)
102 PRK09029 O-succinylbenzoic aci 99.3 1.3E-11 2.9E-16 108.7 10.5 86 74-163 15-100 (458)
103 TIGR02262 benz_CoA_lig benzoat 99.3 2.6E-11 5.7E-16 108.1 12.5 86 74-163 17-102 (508)
104 PRK07768 long-chain-fatty-acid 99.3 9.5E-12 2.1E-16 112.0 9.4 81 74-156 14-94 (545)
105 KOG1176|consensus 99.3 4.2E-11 9E-16 107.5 11.3 99 75-175 29-133 (537)
106 PRK08633 2-acyl-glycerophospho 99.3 3.8E-11 8.3E-16 116.6 11.8 86 74-163 627-712 (1146)
107 PRK12406 long-chain-fatty-acid 99.3 5.9E-11 1.3E-15 105.9 11.9 80 80-163 4-83 (509)
108 PRK09192 acyl-CoA synthetase; 99.2 1.3E-10 2.8E-15 105.7 13.6 94 69-163 27-128 (579)
109 PRK10946 entE enterobactin syn 99.2 4.7E-11 1E-15 107.5 10.6 89 70-163 32-120 (536)
110 PRK06814 acylglycerophosphoeth 99.2 4.4E-11 9.5E-16 116.5 10.5 86 74-163 643-729 (1140)
111 PRK08276 long-chain-fatty-acid 99.2 1.2E-10 2.6E-15 103.7 10.4 76 86-163 8-83 (502)
112 PRK07787 acyl-CoA synthetase; 99.2 1.5E-10 3.2E-15 102.5 10.3 82 73-163 11-92 (471)
113 PRK05851 long-chain-fatty-acid 99.1 4.6E-10 9.9E-15 100.9 10.6 70 74-146 14-85 (525)
114 PRK08308 acyl-CoA synthetase; 99.1 3.9E-10 8.5E-15 98.3 9.8 78 81-163 2-79 (414)
115 PRK07445 O-succinylbenzoic aci 99.1 3.4E-10 7.3E-15 100.2 8.8 73 89-163 19-92 (452)
116 TIGR01923 menE O-succinylbenzo 99.1 4.6E-10 1E-14 98.0 9.0 71 91-163 1-71 (436)
117 KOG1180|consensus 99.0 8.3E-09 1.8E-13 91.0 13.8 98 88-187 88-190 (678)
118 COG1020 EntF Non-ribosomal pep 99.0 2.9E-09 6.4E-14 97.8 10.0 90 70-163 235-324 (642)
119 TIGR01733 AA-adenyl-dom amino 98.9 3.5E-09 7.6E-14 91.5 9.0 71 91-163 1-72 (408)
120 KOG1175|consensus 98.9 5.3E-09 1.1E-13 94.7 10.2 87 75-163 78-168 (626)
121 KOG3628|consensus 98.6 1.6E-07 3.5E-12 88.2 9.5 86 64-149 771-862 (1363)
122 PLN03051 acyl-activating enzym 97.6 8.1E-05 1.8E-09 66.6 4.4 41 121-163 1-41 (499)
123 KOG1178|consensus 95.4 0.009 2E-07 57.7 2.1 62 88-149 68-129 (1032)
124 KOG3628|consensus 95.3 0.052 1.1E-06 52.4 6.7 84 75-160 107-196 (1363)
125 COG1541 PaaK Coenzyme F390 syn 94.4 0.55 1.2E-05 41.6 10.4 84 89-175 109-196 (438)
126 TIGR03335 F390_ftsA coenzyme F 83.6 8.5 0.00019 34.1 8.9 58 89-146 105-164 (445)
127 TIGR02155 PA_CoA_ligase phenyl 67.0 84 0.0018 27.3 10.5 72 89-163 94-167 (422)
128 KOG1177|consensus 63.6 48 0.001 30.2 8.0 84 75-163 232-324 (596)
129 TIGR03089 conserved hypothetic 57.6 68 0.0015 25.6 7.6 50 107-160 171-222 (227)
130 cd01445 TST_Repeats Thiosulfat 56.8 34 0.00074 25.1 5.3 43 100-142 81-126 (138)
131 PF01041 DegT_DnrJ_EryC1: DegT 54.2 30 0.00065 29.7 5.3 57 101-160 52-111 (363)
132 COG2236 Predicted phosphoribos 47.0 38 0.00081 26.7 4.3 35 88-122 5-39 (192)
133 PF09269 DUF1967: Domain of un 44.5 22 0.00047 22.9 2.2 31 89-119 32-62 (69)
134 COG0399 WecE Predicted pyridox 43.4 75 0.0016 27.8 6.0 59 100-161 60-121 (374)
135 TIGR03595 Obg_CgtA_exten Obg f 41.4 35 0.00076 22.0 2.8 23 98-120 41-63 (69)
136 COG1611 Predicted Rossmann fol 40.9 1.3E+02 0.0027 24.0 6.5 66 78-150 16-82 (205)
137 PF06277 EutA: Ethanolamine ut 38.4 3.1E+02 0.0066 24.9 10.5 115 27-145 318-441 (473)
138 PRK08315 AMP-binding domain pr 38.2 2.6E+02 0.0056 25.0 9.0 70 89-163 218-289 (559)
139 PF12646 DUF3783: Domain of un 36.8 1E+02 0.0022 19.0 4.5 31 100-131 15-45 (58)
140 cd01449 TST_Repeat_2 Thiosulfa 36.8 77 0.0017 21.9 4.4 38 102-139 66-103 (118)
141 PRK07656 long-chain-fatty-acid 36.7 2.8E+02 0.006 24.3 8.9 83 75-163 164-255 (513)
142 PRK12583 acyl-CoA synthetase; 35.5 3.2E+02 0.007 24.3 9.5 70 89-163 220-291 (558)
143 COG2885 OmpA Outer membrane pr 34.9 1.8E+02 0.004 22.3 6.6 57 61-121 101-161 (190)
144 PRK06187 long-chain-fatty-acid 33.7 3.3E+02 0.0071 23.9 9.6 69 89-163 186-255 (521)
145 PF08479 POTRA_2: POTRA domain 33.6 66 0.0014 20.7 3.3 27 86-112 27-53 (76)
146 cd01519 RHOD_HSP67B2 Member of 33.2 1.2E+02 0.0025 20.4 4.8 38 102-139 54-91 (106)
147 PRK09162 hypoxanthine-guanine 32.5 1.7E+02 0.0037 22.5 6.0 47 87-134 14-60 (181)
148 TIGR02379 ECA_wecE TDP-4-keto- 31.8 1.3E+02 0.0028 26.0 5.8 39 106-147 63-101 (376)
149 PF13580 SIS_2: SIS domain; PD 31.5 1.4E+02 0.003 21.7 5.1 52 93-144 82-136 (138)
150 PF00667 FAD_binding_1: FAD bi 31.5 38 0.00083 26.9 2.2 28 110-137 41-68 (219)
151 PF08845 SymE_toxin: Toxin Sym 31.0 64 0.0014 20.0 2.7 21 103-123 30-50 (57)
152 PRK11493 sseA 3-mercaptopyruva 30.9 86 0.0019 25.9 4.3 53 89-141 201-258 (281)
153 PF14552 Tautomerase_2: Tautom 30.8 89 0.0019 20.9 3.6 52 75-126 25-77 (82)
154 PLN02723 3-mercaptopyruvate su 30.5 91 0.002 26.4 4.5 53 90-142 239-297 (320)
155 TIGR01923 menE O-succinylbenzo 28.0 3.2E+02 0.007 23.3 7.7 55 89-146 130-185 (436)
156 COG4009 Uncharacterized protei 26.1 1.6E+02 0.0035 19.7 4.0 62 89-163 9-73 (88)
157 PRK11658 UDP-4-amino-4-deoxy-L 26.0 2.1E+02 0.0046 24.6 6.1 56 102-160 61-119 (379)
158 PF00156 Pribosyltran: Phospho 25.7 1.4E+02 0.0029 20.8 4.1 51 89-142 4-54 (125)
159 PRK10595 SOS cell division inh 23.8 1.9E+02 0.0042 22.1 4.7 48 103-150 70-120 (164)
160 PF08700 Vps51: Vps51/Vps67; 23.5 29 0.00064 22.9 0.2 35 171-205 30-64 (87)
161 COG2746 Aminoglycoside N3'-ace 22.6 1E+02 0.0022 25.3 3.1 43 101-143 16-72 (251)
162 PLN02723 3-mercaptopyruvate su 22.4 2.4E+02 0.0052 23.8 5.6 40 100-139 89-129 (320)
163 cd01448 TST_Repeat_1 Thiosulfa 22.3 2.7E+02 0.0059 19.2 5.6 36 104-139 69-105 (122)
164 PRK08043 bifunctional acyl-[ac 22.1 6.7E+02 0.014 23.6 9.7 68 75-145 363-439 (718)
165 COG1223 Predicted ATPase (AAA+ 21.9 2.4E+02 0.0051 23.9 5.1 72 58-129 192-268 (368)
166 PLN02238 hypoxanthine phosphor 21.7 3.1E+02 0.0067 21.3 5.7 44 89-133 11-54 (189)
167 cd07050 BMC_EutL_repeat2 ethan 21.6 1.8E+02 0.0039 19.6 3.6 45 103-147 3-48 (87)
168 PRK09177 xanthine-guanine phos 21.5 3.5E+02 0.0077 20.2 5.9 38 89-128 9-46 (156)
169 PF04023 FeoA: FeoA domain; I 21.5 1.2E+02 0.0026 19.1 2.9 23 100-122 22-44 (74)
170 PRK11706 TDP-4-oxo-6-deoxy-D-g 21.1 2.8E+02 0.006 23.8 5.9 51 107-160 64-117 (375)
171 PRK10719 eutA reactivating fac 20.9 6.4E+02 0.014 22.9 11.2 114 27-144 320-441 (475)
172 PLN03051 acyl-activating enzym 20.4 6E+02 0.013 22.4 8.6 83 76-163 118-208 (499)
173 PRK11493 sseA 3-mercaptopyruva 20.4 3E+02 0.0066 22.6 5.7 25 100-124 73-97 (281)
174 PRK15407 lipopolysaccharide bi 20.2 2.8E+02 0.0061 24.6 5.8 49 109-160 106-157 (438)
175 TIGR01203 HGPRTase hypoxanthin 20.2 3.9E+02 0.0084 20.1 5.9 20 90-109 3-22 (166)
No 1
>KOG1177|consensus
Probab=99.67 E-value=5.1e-16 Score=133.61 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=92.7
Q ss_pred ccchhhHHHHHHHhhcccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHH
Q psy16164 55 CCMISGLILFIFQYIQPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAA 134 (214)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~ 134 (214)
..++++.+....+ ..||+.|+++...|.++||+|+.+.++.+|.+|.++|+++||+|++..||+.+|+...+||
T Consensus 49 ~~Tigq~l~~~t~------~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~ 122 (596)
T KOG1177|consen 49 SETIGQLLETTTE------RVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLAC 122 (596)
T ss_pred cccHHHHHHHHhh------ccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHH
Confidence 3467776655543 5899999998878889999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEecCCCCchhHHHHHHHhhcCce
Q psy16164 135 SLLGITVSSINPQYTEVVKELSQHCVGGLE 164 (214)
Q Consensus 135 ~~~G~i~vpl~~~~~~~~~~l~~~l~~s~~ 164 (214)
.++|.+.|++||.|.. +|+.|.+...++
T Consensus 123 A~AG~v~v~~NP~Yq~--~elr~~L~k~~~ 150 (596)
T KOG1177|consen 123 ARAGLVLVNLNPAYQS--EELRYVLKKVGC 150 (596)
T ss_pred HHhceEEeccCccccc--HHHHHHHhhcCe
Confidence 9999999999999999 999999998774
No 2
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.61 E-value=5.7e-15 Score=137.71 Aligned_cols=121 Identities=16% Similarity=0.219 Sum_probs=95.3
Q ss_pred HHHhhcccc-cCCCceEEEeCCCC---eeeeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEeCCCCc
Q psy16164 65 IFQYIQPNV-VHYRLLFQIDAVTD---ITYTYDDILQKSLQLADALQKR---GYRRG-----------DIVSICSENRLD 126 (214)
Q Consensus 65 ~~~~~~~~~-~~pd~~al~~~~~~---~~~Ty~el~~~~~~la~~L~~~---Gl~~g-----------d~V~i~~~n~~~ 126 (214)
+.+.+.+.+ .+|+++|+++...| +++||+|+.+++.++|++|.++ |+++| |+|+|+++|+++
T Consensus 63 l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e 142 (746)
T PTZ00342 63 IMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN 142 (746)
T ss_pred HHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH
Confidence 333343333 48999999864223 6899999999999999999974 99998 999999999999
Q ss_pred HHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc--eeecchHHHhhhh---hhhccccccccc
Q psy16164 127 YPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL--ELQQKRVEIGALA---EETNSLLKKNVF 188 (214)
Q Consensus 127 ~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~--~~~~~~~~~~~~~---~~~~~~l~~ii~ 188 (214)
|+++++||+++|++.||+++++++ +++.|++++++ ++.+....+..+. .+. +.+++++.
T Consensus 143 w~~~~lA~~~~Gav~Vpl~~~~~~--~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~-~~l~~ii~ 206 (746)
T PTZ00342 143 WLVADLACMLSGVTTLVMHSKFSI--DVIVDILNETKLEWLCLDLDLVEGLLERKNEL-PHLKKLII 206 (746)
T ss_pred HHHHHHHHHHcCCeEEEecCCCCH--HHHHHHHhcCCCCEEEEcHHHHHHHHHhhccC-CCceEEEE
Confidence 999999999999999999999999 99999999887 4444443333332 222 35666653
No 3
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.61 E-value=6.8e-15 Score=135.95 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=81.0
Q ss_pred cCCCceEEEeCC-----CC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDAV-----TD--ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+||++|+.+.. .+ .++||+|+.++++++|++|.++|+++||+|+|+++|+++|+++++||+++|+++||+|+
T Consensus 57 ~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~ 136 (666)
T PLN02614 57 KYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYD 136 (666)
T ss_pred hCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecC
Confidence 589999997421 12 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
.+++ +++.|++++++
T Consensus 137 ~~~~--~~l~~il~~~~ 151 (666)
T PLN02614 137 TLGA--GAVEFIISHSE 151 (666)
T ss_pred CCCH--HHHHHHHhccC
Confidence 9999 99999999887
No 4
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.60 E-value=6.9e-15 Score=135.75 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=81.1
Q ss_pred cCCCceEEEeC-----CCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDA-----VTD--ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|+++|+... ..| .++||+|+.+++.++|.+|.++|+++||+|+|+++|+++|+++++||+++|+++||+++
T Consensus 55 ~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~ 134 (660)
T PLN02861 55 KYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYD 134 (660)
T ss_pred hCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecC
Confidence 58999998642 112 47999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
.++. +++.|++++++
T Consensus 135 ~~~~--~~l~~il~~s~ 149 (660)
T PLN02861 135 TLGA--NAVEFIINHAE 149 (660)
T ss_pred CCCH--HHHHHHHHcCC
Confidence 9999 99999999877
No 5
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.59 E-value=7.2e-15 Score=135.33 Aligned_cols=87 Identities=18% Similarity=0.170 Sum_probs=81.3
Q ss_pred CCCceEEEeCCC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 75 HYRLLFQIDAVT----DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 75 ~pd~~al~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
+|+++|+++..+ .+++||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|++++|+++.+++
T Consensus 74 ~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~ 153 (647)
T PTZ00237 74 KRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSV 153 (647)
T ss_pred CCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCH
Confidence 689999987422 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 154 --~~l~~~l~~~~ 164 (647)
T PTZ00237 154 --KSLIDRIETIT 164 (647)
T ss_pred --HHHHHHHHhcC
Confidence 99999999877
No 6
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.56 E-value=3.2e-14 Score=132.20 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=85.0
Q ss_pred Hhhcccc-cCCCceEEEeCC-------------------------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q psy16164 67 QYIQPNV-VHYRLLFQIDAV-------------------------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSIC 120 (214)
Q Consensus 67 ~~~~~~~-~~pd~~al~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~ 120 (214)
+.+...+ .+||++|+.+.. .++++||+|+.++++++|++|.++|+++||+|+|+
T Consensus 73 ~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~ 152 (700)
T PTZ00216 73 QRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIY 152 (700)
T ss_pred HHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 3333333 499999998631 24689999999999999999999999999999999
Q ss_pred eCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 121 SENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 121 ~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
++|+++|+++++||+++|++++|+++.+++ +++.|++++++
T Consensus 153 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~--~~l~~il~~s~ 193 (700)
T PTZ00216 153 EETRWEWLASIYGIWSQSMVAATVYANLGE--DALAYALRETE 193 (700)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEeeCCCCCH--HHHHhhhhccC
Confidence 999999999999999999999999999999 99999999876
No 7
>KOG1256|consensus
Probab=99.55 E-value=6.1e-14 Score=126.47 Aligned_cols=141 Identities=16% Similarity=0.101 Sum_probs=112.3
Q ss_pred HHHHHHHhhccccc-CCCceEEEeCC------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHH
Q psy16164 61 LILFIFQYIQPNVV-HYRLLFQIDAV------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVA 133 (214)
Q Consensus 61 ~~~~~~~~~~~~~~-~pd~~al~~~~------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA 133 (214)
-+..+++.+.+... +|+.+++-+.. ...++||+|+.+++..+|.+|+++|+++++.|||++-|++||+++.+|
T Consensus 73 ~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a 152 (691)
T KOG1256|consen 73 GPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMA 152 (691)
T ss_pred CcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHH
Confidence 34556666666655 88889985442 235899999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCCCCchhHHHHHHHhhcCce---eecchHHHhhhhhh----hcccccccc-------------------
Q psy16164 134 ASLLGITVSSINPQYTEVVKELSQHCVGGLE---LQQKRVEIGALAEE----TNSLLKKNV------------------- 187 (214)
Q Consensus 134 ~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~~---~~~~~~~~~~~~~~----~~~~l~~ii------------------- 187 (214)
|...|++.||++.++++ +++.|++++++. +.....++..+.+. ..+.+|.+|
T Consensus 153 ~~~~~~v~VplYdTlg~--ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~ 230 (691)
T KOG1256|consen 153 CYAYSLVNVPLYDTLGA--EAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVE 230 (691)
T ss_pred HHhcCCEEeecccCCCH--HHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeE
Confidence 99999999999999999 999999999883 33435555554431 134577766
Q ss_pred ccchHHHHHhccchhh
Q psy16164 188 FHNYMLFIETAKEISR 203 (214)
Q Consensus 188 ~~~~~~~~~~~~~~~~ 203 (214)
..+|+++.+.|++..+
T Consensus 231 v~S~~e~~~lG~~~~~ 246 (691)
T KOG1256|consen 231 VYSWDEFEELGKKNQR 246 (691)
T ss_pred EEEHHHHHhhcccccC
Confidence 3678899888875433
No 8
>PLN02654 acetate-CoA ligase
Probab=99.55 E-value=2.3e-14 Score=132.48 Aligned_cols=87 Identities=23% Similarity=0.328 Sum_probs=81.5
Q ss_pred CCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 75 HYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 75 ~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
+|+++|+++.. .++++||+||.+++.++|++|++.|+++||+|++++||+++++++++||+++|++++|+++.+++
T Consensus 102 ~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~ 181 (666)
T PLN02654 102 NGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSA 181 (666)
T ss_pred CCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 79999998732 23689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 182 --~~l~~~l~~~~ 192 (666)
T PLN02654 182 --ESLAQRIVDCK 192 (666)
T ss_pred --HHHHHHHHhcC
Confidence 99999999877
No 9
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.55 E-value=2.5e-14 Score=124.22 Aligned_cols=88 Identities=25% Similarity=0.315 Sum_probs=82.7
Q ss_pred ccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 73 VVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 73 ~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
..+||++|+++ ..++++||+|+.+++.++|..|.++|+++|++|+++++|+++++++++||+++|++++|++|.++.
T Consensus 6 ~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~-- 82 (417)
T PF00501_consen 6 QRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSLSE-- 82 (417)
T ss_dssp HHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTSSH--
T ss_pred hhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccccc--
Confidence 35999999999 458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+.++.++
T Consensus 83 ~~~~~~l~~~~ 93 (417)
T PF00501_consen 83 DELRHILRQSG 93 (417)
T ss_dssp HHHHHHHHHHT
T ss_pred ccccccccccc
Confidence 99999998776
No 10
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.55 E-value=4e-14 Score=131.47 Aligned_cols=82 Identities=17% Similarity=0.243 Sum_probs=75.1
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc--eee
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL--ELQ 166 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~--~~~ 166 (214)
++||+|+.+++.++|++|.++|+++||+|+|+++|+++|+++++||+++|+++||+|+.+++ +++.|++++++ ++.
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~--~~l~~il~~s~~~~li 183 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGE--EALCHSLNETEVTTVI 183 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCH--HHHHHHHHccCCCEEE
Confidence 48999999999999999999999999999999999999999999999999999999999999 99999999877 444
Q ss_pred cchHHH
Q psy16164 167 QKRVEI 172 (214)
Q Consensus 167 ~~~~~~ 172 (214)
+....+
T Consensus 184 ~~~~~~ 189 (696)
T PLN02387 184 CDSKQL 189 (696)
T ss_pred ECHHHH
Confidence 444333
No 11
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.55 E-value=7.8e-14 Score=126.80 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=82.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. +.++||+||.++++++|++|.+.|+++||+|+|+++|+++|+++++||+++|++++|+|+.++. +
T Consensus 26 ~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~--~ 101 (579)
T PLN03102 26 CYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRLDA--T 101 (579)
T ss_pred hCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccCCH--H
Confidence 58999999986 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.++++.++
T Consensus 102 ~l~~~l~~~~ 111 (579)
T PLN03102 102 SIAAILRHAK 111 (579)
T ss_pred HHHHHHhccC
Confidence 9999999776
No 12
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.54 E-value=3e-14 Score=130.64 Aligned_cols=88 Identities=19% Similarity=0.182 Sum_probs=82.1
Q ss_pred cCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+|+++|+++.. +++.+||+||.+++.++|++|+++|+++||+|+++++|+++++++++||+++|++++|+++.++
T Consensus 64 ~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~ 143 (628)
T TIGR02316 64 ERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFA 143 (628)
T ss_pred cCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCC
Confidence 489999998732 2468999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++++++
T Consensus 144 ~--~~l~~~l~~~~ 155 (628)
T TIGR02316 144 S--HSLALRIDDAT 155 (628)
T ss_pred H--HHHHHHHHhcC
Confidence 9 99999999876
No 13
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.54 E-value=3.3e-14 Score=128.66 Aligned_cols=86 Identities=22% Similarity=0.248 Sum_probs=82.4
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|++++ ++.+||+||.+++.++|++|.+.|+++||+|+++++|+++|+++++||+++|++++|+|+.++. +
T Consensus 19 ~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~--~ 94 (563)
T PLN02860 19 LRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPLNYRWSF--E 94 (563)
T ss_pred hcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeCCcccCH--H
Confidence 59999999875 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 95 ~l~~~l~~~~ 104 (563)
T PLN02860 95 EAKSAMLLVR 104 (563)
T ss_pred HHHHHHHhcC
Confidence 9999999777
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.54 E-value=3.1e-14 Score=130.37 Aligned_cols=88 Identities=16% Similarity=0.182 Sum_probs=82.1
Q ss_pred cCCCceEEEeCCC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAVT----DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+|+++|+++..+ .+.+||+||.+++.++|++|+++|+++||+|+++++|+++++++++||+++|++++|+++.++
T Consensus 69 ~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~ 148 (625)
T TIGR02188 69 ARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFS 148 (625)
T ss_pred cCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCC
Confidence 4899999986432 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
+ +++.+++++++
T Consensus 149 ~--~~l~~~l~~~~ 160 (625)
T TIGR02188 149 A--EALADRINDAG 160 (625)
T ss_pred H--HHHHHHHHhcC
Confidence 9 99999999776
No 15
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.54 E-value=1.2e-13 Score=127.26 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=80.4
Q ss_pred cCCCceEEEe---CCC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQID---AVT----DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~---~~~----~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|+++|+.. .+. .+.+||+|+.++++++|++|+++|+++||+|+|+++|+++|+++++||+++|+++||+++
T Consensus 56 ~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~ 135 (651)
T PLN02736 56 TFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYD 135 (651)
T ss_pred hCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeec
Confidence 5999999842 111 246999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
.+++ +++.+++++++
T Consensus 136 ~~~~--~~l~~il~~~~ 150 (651)
T PLN02736 136 TLGP--DAVKFIVNHAE 150 (651)
T ss_pred CCCH--HHHHHHHhccC
Confidence 9999 99999999776
No 16
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.54 E-value=6.3e-14 Score=129.41 Aligned_cols=88 Identities=15% Similarity=0.087 Sum_probs=80.5
Q ss_pred cCCCceEEEeCC-----CC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDAV-----TD--ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|+++|+.... .+ .++||+|+.+++.++|++|.+.|+++||+|+|+++|+++|+++++||+++|+++||+++
T Consensus 54 ~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~ 133 (660)
T PLN02430 54 KYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYD 133 (660)
T ss_pred hCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecc
Confidence 489999986421 11 35799999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
++++ +++.|++++++
T Consensus 134 ~~~~--~~l~~il~~~~ 148 (660)
T PLN02430 134 TLGP--GAVDYIVDHAE 148 (660)
T ss_pred CCCH--HHHHHHHhccC
Confidence 9999 99999999877
No 17
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.53 E-value=5e-14 Score=127.10 Aligned_cols=88 Identities=25% Similarity=0.229 Sum_probs=82.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++...+.++||+||.+++.++|..|++.|+++||+|+|+++|+++++++++||+++|++++|+||.+++ .
T Consensus 23 ~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln~~~~~--~ 100 (534)
T COG0318 23 RNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPRLTP--R 100 (534)
T ss_pred hCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecCcccCH--H
Confidence 58999999987333349999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+++++
T Consensus 101 ~l~~~l~~~~ 110 (534)
T COG0318 101 ELAYILNDAG 110 (534)
T ss_pred HHHHHHHhcC
Confidence 9999999876
No 18
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.53 E-value=5.7e-14 Score=130.98 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=82.3
Q ss_pred cCCCceEEEeCCCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC
Q psy16164 74 VHYRLLFQIDAVTD------ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 74 ~~pd~~al~~~~~~------~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
.+|+++|+++..++ +.+||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++|++++|++|.
T Consensus 187 ~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~ 266 (728)
T PLN03052 187 KTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADS 266 (728)
T ss_pred cCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCC
Confidence 47999999876432 479999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHhhcCc
Q psy16164 148 YTEVVKELSQHCVGGL 163 (214)
Q Consensus 148 ~~~~~~~l~~~l~~s~ 163 (214)
+++ +++.+++++++
T Consensus 267 ~~~--~~l~~rl~~~~ 280 (728)
T PLN03052 267 FAP--SEIATRLKISK 280 (728)
T ss_pred CCH--HHHHHHHHhcC
Confidence 999 99999999776
No 19
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.52 E-value=1.6e-13 Score=123.71 Aligned_cols=86 Identities=23% Similarity=0.259 Sum_probs=82.5
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 61 ~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 136 (549)
T PRK07788 61 RAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILLNTGFSG--P 136 (549)
T ss_pred HCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCCCCH--H
Confidence 59999999986 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+++++
T Consensus 137 ~l~~~l~~~~ 146 (549)
T PRK07788 137 QLAEVAAREG 146 (549)
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 20
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.51 E-value=8.4e-14 Score=127.60 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=82.0
Q ss_pred cCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+|+++|+++.. ..+.+||+||.+++.++|++|+++|+++||+|+++++|+++++++++||+++|++++|+++.++
T Consensus 65 ~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~ 144 (629)
T PRK10524 65 KRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFA 144 (629)
T ss_pred cCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCC
Confidence 489999998632 2468999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++.+++
T Consensus 145 ~--~~l~~~l~~~~ 156 (629)
T PRK10524 145 S--HSLAARIDDAK 156 (629)
T ss_pred H--HHHHHHHHhcC
Confidence 9 99999999877
No 21
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.51 E-value=2e-13 Score=125.24 Aligned_cols=90 Identities=20% Similarity=0.153 Sum_probs=80.5
Q ss_pred cCCCceEEEeCCC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAVT----DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+||++|+++.+. .+++||+||.++++++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|++|.++
T Consensus 61 ~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~ 140 (624)
T PRK12582 61 EAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYS 140 (624)
T ss_pred HCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccc
Confidence 5899999986421 268999999999999999999999999999999999999999999999999999999999987
Q ss_pred h---hHHHHHHHhhcCc
Q psy16164 150 E---VVKELSQHCVGGL 163 (214)
Q Consensus 150 ~---~~~~l~~~l~~s~ 163 (214)
. ..+++.+++++++
T Consensus 141 ~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 141 LMSHDHAKLKHLFDLVK 157 (624)
T ss_pred cccCCHHHHHHHHHhcC
Confidence 3 1278999998776
No 22
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.51 E-value=2.1e-13 Score=124.83 Aligned_cols=88 Identities=22% Similarity=0.230 Sum_probs=81.2
Q ss_pred cCCCceEEEeCC---CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc-
Q psy16164 74 VHYRLLFQIDAV---TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT- 149 (214)
Q Consensus 74 ~~pd~~al~~~~---~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~- 149 (214)
.+|+++|+++.. ..+++||+||.++++++|++|.+.|+++||+|+++++|+++|+++++||+++|++++|++|.++
T Consensus 51 ~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~ 130 (614)
T PRK08180 51 EAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVSPAYSL 130 (614)
T ss_pred HCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeecccccc
Confidence 589999998742 1368999999999999999999999999999999999999999999999999999999999998
Q ss_pred ----hhHHHHHHHhhcCc
Q psy16164 150 ----EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ----~~~~~l~~~l~~s~ 163 (214)
. +++.+++++++
T Consensus 131 ~~~~~--~~l~~~l~~~~ 146 (614)
T PRK08180 131 VSQDF--GKLRHVLELLT 146 (614)
T ss_pred ccCCH--HHHHHHHhcCC
Confidence 6 89999999776
No 23
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.50 E-value=2.1e-13 Score=122.92 Aligned_cols=88 Identities=15% Similarity=0.152 Sum_probs=82.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++.+.+..+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 26 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~--~ 103 (540)
T PRK05857 26 QQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMADGNLPI--A 103 (540)
T ss_pred hCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCH--H
Confidence 58999999865445689999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++..++
T Consensus 104 ~l~~~~~~~~ 113 (540)
T PRK05857 104 AIERFCQITD 113 (540)
T ss_pred HHHHHHHhcC
Confidence 9999988665
No 24
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.50 E-value=1.1e-13 Score=126.98 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=82.0
Q ss_pred cCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+|+++|+++.. .++.+||+||.+++.++|..|++.|+++||+|+++++|+++++++++||+++|++++|+++.++
T Consensus 79 ~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~ 158 (637)
T PRK00174 79 TRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFS 158 (637)
T ss_pred cCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCC
Confidence 489999998642 2358999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++++++
T Consensus 159 ~--~~l~~~l~~~~ 170 (637)
T PRK00174 159 A--EALADRIIDAG 170 (637)
T ss_pred H--HHHHHHHHhcC
Confidence 9 99999999776
No 25
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.49 E-value=2.2e-13 Score=122.37 Aligned_cols=88 Identities=19% Similarity=0.217 Sum_probs=82.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++..+++.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 28 ~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~--~ 105 (534)
T PRK05852 28 RLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPI--A 105 (534)
T ss_pred hCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEEeecCCCCCc--H
Confidence 58999999886455689999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+.+++
T Consensus 106 ~l~~~l~~~~ 115 (534)
T PRK05852 106 EQRVRSQAAG 115 (534)
T ss_pred HHHHHHHhCC
Confidence 9999999776
No 26
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.49 E-value=1.7e-13 Score=123.44 Aligned_cols=86 Identities=21% Similarity=0.161 Sum_probs=82.4
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++.+||.||.++++++|++|.++|+++|++|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 55 ~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 130 (537)
T PRK13382 55 RCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLLNTSFAG--P 130 (537)
T ss_pred hCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEecCcccCH--H
Confidence 59999999985 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 131 ~l~~~l~~~~ 140 (537)
T PRK13382 131 ALAEVVTREG 140 (537)
T ss_pred HHHHHHHhcC
Confidence 9999999777
No 27
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.49 E-value=6e-13 Score=118.82 Aligned_cols=86 Identities=23% Similarity=0.263 Sum_probs=82.5
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+.+. ++.+||.||.++++++|..|.+.|+++||+|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 15 ~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~--~ 90 (533)
T PRK07798 15 AVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVNYRYVE--D 90 (533)
T ss_pred hCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecCcCCCH--H
Confidence 58999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 91 ~l~~~l~~~~ 100 (533)
T PRK07798 91 ELRYLLDDSD 100 (533)
T ss_pred HHHHHHhhcC
Confidence 9999999766
No 28
>PRK09274 peptide synthase; Provisional
Probab=99.48 E-value=2e-13 Score=123.02 Aligned_cols=88 Identities=17% Similarity=0.121 Sum_probs=81.7
Q ss_pred cCCCceEEEeCCCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecC
Q psy16164 74 VHYRLLFQIDAVTD--------ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 74 ~~pd~~al~~~~~~--------~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~ 145 (214)
.+|+++|+++...+ +++||+||.+++.++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|++
T Consensus 18 ~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 18 ERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVLVD 97 (552)
T ss_pred hCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEEcC
Confidence 58999999875322 2799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
|.++. +++.+++.+++
T Consensus 98 ~~~~~--~~l~~~l~~~~ 113 (552)
T PRK09274 98 PGMGI--KNLKQCLAEAQ 113 (552)
T ss_pred CCccH--HHHHHHHHhcC
Confidence 99999 99999999776
No 29
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.48 E-value=2.7e-13 Score=120.76 Aligned_cols=88 Identities=26% Similarity=0.246 Sum_probs=83.6
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+.++++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.+++ +
T Consensus 9 ~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~~--~ 86 (501)
T PRK13390 9 IAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLTA--P 86 (501)
T ss_pred hCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCCH--H
Confidence 48999999876567899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 87 ~~~~~~~~~~ 96 (501)
T PRK13390 87 EADYIVGDSG 96 (501)
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 30
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.48 E-value=4.5e-13 Score=120.80 Aligned_cols=88 Identities=24% Similarity=0.272 Sum_probs=82.2
Q ss_pred cCCCceEEEeCCC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAVT----DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+|+++|+++... .+.+||.||.++++++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|++|.++
T Consensus 36 ~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~~~~ 115 (547)
T PRK13295 36 SCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMPIFR 115 (547)
T ss_pred HCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEeccccccC
Confidence 5899999987532 278999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++.+++
T Consensus 116 ~--~~l~~~l~~~~ 127 (547)
T PRK13295 116 E--RELSFMLKHAE 127 (547)
T ss_pred H--HHHHHHHHhcC
Confidence 9 99999999776
No 31
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.47 E-value=8.4e-13 Score=119.08 Aligned_cols=86 Identities=20% Similarity=0.269 Sum_probs=82.3
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. +..+||+||.+++.++|..|.+.|+++|++|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 33 ~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 108 (542)
T PRK06155 33 RYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPINTALRG--P 108 (542)
T ss_pred HCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEeccccCH--H
Confidence 59999999986 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++...+.+++
T Consensus 109 ~l~~~l~~~~ 118 (542)
T PRK06155 109 QLEHILRNSG 118 (542)
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 32
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.47 E-value=4.7e-13 Score=120.50 Aligned_cols=87 Identities=20% Similarity=0.263 Sum_probs=82.4
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. +++.+||+|+.+++.++|+.|.+.|+++||+|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 35 ~~pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~--~ 111 (547)
T PRK06087 35 AMPDKIAVVDN-HGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLPSWRE--A 111 (547)
T ss_pred HCCCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccchhcCH--H
Confidence 58999999875 45799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 112 ~l~~~l~~~~ 121 (547)
T PRK06087 112 ELVWVLNKCQ 121 (547)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 33
>PLN02246 4-coumarate--CoA ligase
Probab=99.47 E-value=8.3e-13 Score=118.72 Aligned_cols=88 Identities=28% Similarity=0.372 Sum_probs=82.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++...++++||.||.++++++|+.|.+.|+++||+|+++++|+++|+++++||+++|++++|++|.++. +
T Consensus 35 ~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 112 (537)
T PLN02246 35 EFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTP--A 112 (537)
T ss_pred hCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCH--H
Confidence 58999999986556789999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++..+++.++
T Consensus 113 ~l~~~l~~~~ 122 (537)
T PLN02246 113 EIAKQAKASG 122 (537)
T ss_pred HHHHHHHhcC
Confidence 9999998665
No 34
>PLN02479 acetate-CoA ligase
Probab=99.46 E-value=5.3e-13 Score=120.93 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=82.6
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.++ +..+||+||..+++++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 32 ~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~--~ 107 (567)
T PLN02479 32 VHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVNIRLNA--P 107 (567)
T ss_pred hCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEeccccCH--H
Confidence 58999999985 6789999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 108 ~l~~~l~~~~ 117 (567)
T PLN02479 108 TIAFLLEHSK 117 (567)
T ss_pred HHHHHHhhcC
Confidence 9999999877
No 35
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.46 E-value=3.8e-13 Score=123.94 Aligned_cols=88 Identities=19% Similarity=0.118 Sum_probs=81.4
Q ss_pred cCCCceEEEeCCC---CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 74 VHYRLLFQIDAVT---DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 74 ~~pd~~al~~~~~---~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
.+|+++|+++..+ .+++||+||.+++.++|+.|++.|+++||+|+++++|+++++++++||+++|++++|+++.+++
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~ 175 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGV 175 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCH
Confidence 4789999987532 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 176 --~~l~~~l~~~~ 186 (655)
T PRK03584 176 --QGVLDRFGQIE 186 (655)
T ss_pred --HHHHHHHHHcC
Confidence 99999999766
No 36
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.46 E-value=3.9e-13 Score=123.98 Aligned_cols=87 Identities=21% Similarity=0.148 Sum_probs=80.3
Q ss_pred CCCceEEEeCCC-C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 75 HYRLLFQIDAVT-D--ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 75 ~pd~~al~~~~~-~--~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.++++|+++... + +.+||+||..++.++|++|+++|+++||+|+++++|+++++++++||+++|++++|+++.+++
T Consensus 97 ~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~- 175 (652)
T TIGR01217 97 AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGA- 175 (652)
T ss_pred CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCH-
Confidence 468889876432 2 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 176 -~~l~~~l~~~~ 186 (652)
T TIGR01217 176 -RGVLDRFQQIE 186 (652)
T ss_pred -HHHHHHHHhcC
Confidence 99999999776
No 37
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.46 E-value=1.1e-12 Score=118.14 Aligned_cols=88 Identities=22% Similarity=0.235 Sum_probs=83.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++.+.++.+||.||.+++.++|..|.+.|+++|++|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 30 ~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~--~ 107 (558)
T PRK12583 30 RFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINPAYRA--S 107 (558)
T ss_pred HCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCCCCCH--H
Confidence 58999999886567899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 108 ~~~~~l~~~~ 117 (558)
T PRK12583 108 ELEYALGQSG 117 (558)
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 38
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.46 E-value=6.5e-13 Score=120.33 Aligned_cols=86 Identities=27% Similarity=0.162 Sum_probs=82.3
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||.||.+.+.++|+.|.+.|+++||+|+++++|+++|+++++||+++|++++|++|.++. +
T Consensus 44 ~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~--~ 119 (573)
T PRK05605 44 RFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTA--H 119 (573)
T ss_pred HCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCH--H
Confidence 58999999885 6789999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 120 ~l~~~l~~~~ 129 (573)
T PRK05605 120 ELEHPFEDHG 129 (573)
T ss_pred HHHHHHhccC
Confidence 9999999766
No 39
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.46 E-value=4.2e-13 Score=121.45 Aligned_cols=86 Identities=26% Similarity=0.320 Sum_probs=81.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++|+++++||+++|++++|++|.++.
T Consensus 36 ~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~-- 111 (562)
T PRK05677 36 RFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTA-- 111 (562)
T ss_pred hCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeecCCCCCH--
Confidence 48999999985 6799999999999999999997 699999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 112 ~~l~~~l~~~~ 122 (562)
T PRK05677 112 REMEHQFNDSG 122 (562)
T ss_pred HHHHHHHhccC
Confidence 99999999776
No 40
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.46 E-value=1e-12 Score=118.40 Aligned_cols=85 Identities=19% Similarity=0.121 Sum_probs=81.2
Q ss_pred CCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 75 HYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGY-RRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 75 ~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.|+++|+++. +..+||.||.+++.++|..|.+.|+ .+||+|+++++|+++|+++++||+++|++++|++|.++. +
T Consensus 14 ~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~--~ 89 (540)
T PRK13388 14 GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNTTRRG--A 89 (540)
T ss_pred cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecccCCh--H
Confidence 6999999885 7799999999999999999999999 799999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 90 ~l~~~l~~~~ 99 (540)
T PRK13388 90 ALAADIRRAD 99 (540)
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 41
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.45 E-value=6.8e-13 Score=119.58 Aligned_cols=88 Identities=23% Similarity=0.357 Sum_probs=83.3
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++..+++.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 40 ~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 117 (546)
T PLN02330 40 LYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALE--S 117 (546)
T ss_pred cCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCH--H
Confidence 58999999876557899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 118 ~l~~~l~~~~ 127 (546)
T PLN02330 118 EIKKQAEAAG 127 (546)
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 42
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.45 E-value=4.3e-13 Score=108.46 Aligned_cols=74 Identities=14% Similarity=0.007 Sum_probs=66.9
Q ss_pred ccCCCceEEEeC-C---CCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 73 VVHYRLLFQIDA-V---TDITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 73 ~~~pd~~al~~~-~---~~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
+.+|+++|+++. + ++.++||+|+.+++.++|+.|++ +|+++||+|+|+++|+++++++++|++++|++++|+|.
T Consensus 7 ~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~n~ 85 (227)
T TIGR03089 7 AADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLAGD 85 (227)
T ss_pred hhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeCCC
Confidence 358999999753 2 23479999999999999999998 79999999999999999999999999999999999985
No 43
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.45 E-value=1.1e-12 Score=118.81 Aligned_cols=89 Identities=26% Similarity=0.364 Sum_probs=83.5
Q ss_pred ccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 73 VVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 73 ~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
..+|+++|+++..++.++||+||.+++.++|++|.+ .|+++||+|+++++|+++|+++++||+++|++++|++|.++.
T Consensus 50 ~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~- 128 (560)
T PLN02574 50 HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSL- 128 (560)
T ss_pred cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCH-
Confidence 468999999987556689999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 129 -~~l~~~l~~~~ 139 (560)
T PLN02574 129 -GEIKKRVVDCS 139 (560)
T ss_pred -HHHHHHHHhcC
Confidence 99999999776
No 44
>PRK08315 AMP-binding domain protein; Validated
Probab=99.45 E-value=1.4e-12 Score=117.50 Aligned_cols=88 Identities=22% Similarity=0.230 Sum_probs=83.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++.+.+..+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|++|.++. .
T Consensus 28 ~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 105 (559)
T PRK08315 28 RYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTINPAYRL--S 105 (559)
T ss_pred HCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecCccCCH--H
Confidence 58999999886567789999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++..++..++
T Consensus 106 ~~~~~l~~~~ 115 (559)
T PRK08315 106 ELEYALNQSG 115 (559)
T ss_pred HHHHHHHhcC
Confidence 9999888666
No 45
>PTZ00297 pantothenate kinase; Provisional
Probab=99.45 E-value=1.6e-12 Score=127.49 Aligned_cols=111 Identities=18% Similarity=0.190 Sum_probs=88.2
Q ss_pred cCCCceEEEeC---CCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 74 VHYRLLFQIDA---VTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 74 ~~pd~~al~~~---~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
.+|+++|+... .+.+++||+|+.+++.++|.+|.++|+++||+|+|+++|+++|+++++||+.+|++.||+++ +.
T Consensus 439 ~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~ 516 (1452)
T PTZ00297 439 RHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLVG--KG 516 (1452)
T ss_pred HCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CH
Confidence 58999998642 12368999999999999999999999999999999999999999999999999999999975 45
Q ss_pred hHHHHHHHhhcCc--eeecchHHHhhhhhhhccccccccc
Q psy16164 151 VVKELSQHCVGGL--ELQQKRVEIGALAEETNSLLKKNVF 188 (214)
Q Consensus 151 ~~~~l~~~l~~s~--~~~~~~~~~~~~~~~~~~~l~~ii~ 188 (214)
.++.|++++++ ++......+..+.+...+.++++|.
T Consensus 517 --~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv 554 (1452)
T PTZ00297 517 --STMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVY 554 (1452)
T ss_pred --HHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEE
Confidence 78999999777 4444444444443322224666553
No 46
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.44 E-value=5.6e-13 Score=119.27 Aligned_cols=86 Identities=21% Similarity=0.277 Sum_probs=81.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. +..+||.|+.+++.++|++|.+.|+++||+|+++++|+++++++++||+.+|++++|+++.++. +
T Consensus 47 ~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~--~ 122 (516)
T PRK13383 47 RWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPISTEFRS--D 122 (516)
T ss_pred HCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcCccCCH--H
Confidence 58999999885 5689999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 123 ~l~~~l~~~~ 132 (516)
T PRK13383 123 ALAAALRAHH 132 (516)
T ss_pred HHHHHHhcCC
Confidence 9999998776
No 47
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.44 E-value=8.8e-13 Score=119.51 Aligned_cols=88 Identities=17% Similarity=0.159 Sum_probs=81.7
Q ss_pred cCCCceEEEeCC--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 74 VHYRLLFQIDAV--TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 74 ~~pd~~al~~~~--~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.+|+++|+.+.. .++++||+||.+++.++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|+++.+++
T Consensus 56 ~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~- 134 (570)
T PRK04319 56 GRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFME- 134 (570)
T ss_pred CCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEcccccccCH-
Confidence 368999998642 24689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 135 -~~l~~~l~~~~ 145 (570)
T PRK04319 135 -EAVRDRLEDSE 145 (570)
T ss_pred -HHHHHHHHccC
Confidence 99999999776
No 48
>PRK07529 AMP-binding domain protein; Validated
Probab=99.44 E-value=6e-13 Score=122.25 Aligned_cols=87 Identities=18% Similarity=0.198 Sum_probs=80.1
Q ss_pred cCCCceEEEeCC------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC
Q psy16164 74 VHYRLLFQIDAV------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 74 ~~pd~~al~~~~------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
.+|+++|+++.. .++++||+||.+++.++|+.|+++|+++||+|+++++|+++++++++||+++| +++|+|+.
T Consensus 37 ~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~~~ 115 (632)
T PRK07529 37 RHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPINPL 115 (632)
T ss_pred HCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCCCc
Confidence 499999997631 35689999999999999999999999999999999999999999999999999 67999999
Q ss_pred CchhHHHHHHHhhcCc
Q psy16164 148 YTEVVKELSQHCVGGL 163 (214)
Q Consensus 148 ~~~~~~~l~~~l~~s~ 163 (214)
+++ +++.+++++++
T Consensus 116 ~~~--~~i~~~l~~~~ 129 (632)
T PRK07529 116 LEP--EQIAELLRAAG 129 (632)
T ss_pred CCH--HHHHHHHHhcC
Confidence 999 99999999776
No 49
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.44 E-value=5.8e-13 Score=123.75 Aligned_cols=84 Identities=21% Similarity=0.254 Sum_probs=80.1
Q ss_pred CCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHH
Q psy16164 75 HYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKE 154 (214)
Q Consensus 75 ~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~ 154 (214)
+||++|+++. ..+||+||.++++++|+.|.+.|+++|++|+++++|+++|+++++||+++|++++|++|.++. ++
T Consensus 19 ~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~--~~ 93 (705)
T PRK06060 19 WYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELHR--DD 93 (705)
T ss_pred CCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCCCCH--HH
Confidence 7999999874 479999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHhhcCc
Q psy16164 155 LSQHCVGGL 163 (214)
Q Consensus 155 l~~~l~~s~ 163 (214)
+.+++++++
T Consensus 94 l~~~l~~~~ 102 (705)
T PRK06060 94 HALAARNTE 102 (705)
T ss_pred HHHHHhcCC
Confidence 999998776
No 50
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.44 E-value=1.9e-12 Score=115.61 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=82.1
Q ss_pred cCCCceEEEeCC---CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 74 VHYRLLFQIDAV---TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 74 ~~pd~~al~~~~---~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
.+|+++|+++.+ +.+.+||.||.++++++|.+|.++|+++||+|+++++|+++|+++++||+++|++++|+++.++.
T Consensus 19 ~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~ 98 (517)
T PRK08008 19 VYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLR 98 (517)
T ss_pred HCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcCcccCH
Confidence 599999998753 13689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+.+.+++
T Consensus 99 --~~l~~~l~~~~ 109 (517)
T PRK08008 99 --EESAWILQNSQ 109 (517)
T ss_pred --HHHHHHHHhcC
Confidence 99999999777
No 51
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.44 E-value=6.1e-13 Score=131.68 Aligned_cols=88 Identities=26% Similarity=0.312 Sum_probs=81.9
Q ss_pred cCCCceEEEeCC-------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDAV-------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+||++|+++.. .++++||+||.+++.++|.+|.+.|+++|++|+++++|+++|+++++||+++|++++|++|
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCC
Confidence 499999998631 3568999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
.+++ +++.+++.+++
T Consensus 328 ~~p~--~~~~~~l~~~~ 342 (1389)
T TIGR03443 328 AYPP--ARQTIYLSVAK 342 (1389)
T ss_pred CCcH--HHHHHHHHhcC
Confidence 9999 99999998776
No 52
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.43 E-value=1.8e-12 Score=124.67 Aligned_cols=88 Identities=24% Similarity=0.235 Sum_probs=79.6
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++.+||+||.++++++|++|.+.|+++||+|+|+++|+++|+++++||+++|++++|+||. .
T Consensus 459 ~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~-----~ 531 (994)
T PRK07868 459 DAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD-----T 531 (994)
T ss_pred HCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----h
Confidence 59999999985 6799999999999999999999999999999999999999999999999999999999983 6
Q ss_pred HHHHHhhcCc--eeecc
Q psy16164 154 ELSQHCVGGL--ELQQK 168 (214)
Q Consensus 154 ~l~~~l~~s~--~~~~~ 168 (214)
++.+++++++ .+.+.
T Consensus 532 ~l~~il~~s~~~~li~~ 548 (994)
T PRK07868 532 DLAAAVRLGGVTEIITD 548 (994)
T ss_pred hHHHHHhccCCeEEEEC
Confidence 7788888766 44443
No 53
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.43 E-value=8.1e-13 Score=116.90 Aligned_cols=86 Identities=17% Similarity=0.196 Sum_probs=82.1
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++.+||.|+.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 14 ~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~~~~~~--~ 89 (483)
T PRK03640 14 LTPDRTAIEFE--EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLNTRLSR--E 89 (483)
T ss_pred hCCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecCcCCCH--H
Confidence 58999999986 6899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+.+++
T Consensus 90 ~~~~~~~~~~ 99 (483)
T PRK03640 90 ELLWQLDDAE 99 (483)
T ss_pred HHHHHHHhCC
Confidence 9999998766
No 54
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.43 E-value=1.6e-12 Score=117.05 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=81.5
Q ss_pred cCCCceEEEeCCC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 74 VHYRLLFQIDAVT--DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 74 ~~pd~~al~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.+||+++++.... .+++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~- 100 (542)
T PRK06018 22 IHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVNPRLFP- 100 (542)
T ss_pred hCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccccccCH-
Confidence 5899999985322 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.++++.++
T Consensus 101 -~~l~~~l~~~~ 111 (542)
T PRK06018 101 -EQIAWIINHAE 111 (542)
T ss_pred -HHHHHHHhccC
Confidence 99999998766
No 55
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.42 E-value=1.1e-12 Score=117.29 Aligned_cols=86 Identities=20% Similarity=0.219 Sum_probs=79.0
Q ss_pred CCCceEEEeCCC---CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 75 HYRLLFQIDAVT---DITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 75 ~pd~~al~~~~~---~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
.+|+.|+++..+ .+.+||+||.+.+.++|+.|++ .|+ +||+|+|++||.+|.++++|||+++|+|.+|+++.+++
T Consensus 23 ~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 23 RPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred CCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeecccCCCH
Confidence 478899887643 2689999999999999999986 578 99999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 102 --~al~~Ri~d~~ 112 (528)
T COG0365 102 --EAVADRIADLG 112 (528)
T ss_pred --HHHHHHHHccC
Confidence 99999999877
No 56
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.42 E-value=1.9e-12 Score=116.56 Aligned_cols=86 Identities=22% Similarity=0.167 Sum_probs=82.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||.||.++++++|.+|.+.|+.+|++|+++++|+++++++++||+++|++++|++|.++. .
T Consensus 33 ~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 108 (541)
T TIGR03205 33 DYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLSPLDGE--R 108 (541)
T ss_pred HcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCCCCCH--H
Confidence 58999999885 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 109 ~l~~~i~~~~ 118 (541)
T TIGR03205 109 ALSHKLSDSG 118 (541)
T ss_pred HHHHHHhhcC
Confidence 9999999777
No 57
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.42 E-value=2.9e-12 Score=115.20 Aligned_cols=86 Identities=22% Similarity=0.247 Sum_probs=82.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKR-GYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+++|+++. ++.+||+||.+++.++|..|.+. |+++|++|+++++|+++|+++++||+++|++++|++|.++.
T Consensus 22 ~~~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~-- 97 (546)
T PRK08314 22 RYPDKTAIVFY--GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNRE-- 97 (546)
T ss_pred HcCCCcceeec--CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeecCcCcCH--
Confidence 58999999986 67999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++...+++++
T Consensus 98 ~~l~~~l~~~~ 108 (546)
T PRK08314 98 EELAHYVTDSG 108 (546)
T ss_pred HHHHHHHHhCC
Confidence 99999999776
No 58
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.42 E-value=1.2e-12 Score=118.05 Aligned_cols=84 Identities=14% Similarity=0.006 Sum_probs=77.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. .++++||+||.++++++|..|.+ .+||+|+++++|+++|+++++||+++|++++|+|+.++. +
T Consensus 31 ~~p~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~--~ 104 (539)
T PRK06334 31 EMTTATVCWDE-QLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKIPVMINWSQGL--R 104 (539)
T ss_pred hCCCceEEEeC-CCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCeeEecCcccch--H
Confidence 58999999875 34689999999999999999986 389999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 105 ~l~~~l~~~~ 114 (539)
T PRK06334 105 EVTACANLVG 114 (539)
T ss_pred HHHHHHHHcC
Confidence 9999999776
No 59
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.41 E-value=1.9e-12 Score=116.37 Aligned_cols=86 Identities=28% Similarity=0.368 Sum_probs=81.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||.||.+++.++|..|.+.|+++||+|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 22 ~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 97 (540)
T PRK06164 22 ARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVNTRYRS--H 97 (540)
T ss_pred hCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCc--H
Confidence 58999999864 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 98 ~l~~~i~~~~ 107 (540)
T PRK06164 98 EVAHILGRGR 107 (540)
T ss_pred HHHHHHHhcC
Confidence 9999998776
No 60
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.41 E-value=1e-12 Score=116.54 Aligned_cols=86 Identities=23% Similarity=0.280 Sum_probs=81.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+||++|++++ ++.+||.|+.++++++|.+|++ .|+.+|++|+++++|+++|+++++||+++|++++|+++.+++
T Consensus 14 ~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~-- 89 (496)
T PRK06839 14 LHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIRLTE-- 89 (496)
T ss_pred HCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecCcccCH--
Confidence 58999999985 7899999999999999999985 799999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++..++
T Consensus 90 ~~~~~~l~~~~ 100 (496)
T PRK06839 90 NELIFQLKDSG 100 (496)
T ss_pred HHHHHHHHhcC
Confidence 99999998665
No 61
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.41 E-value=3.3e-12 Score=116.44 Aligned_cols=86 Identities=22% Similarity=0.228 Sum_probs=82.3
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 49 ~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~--~ 124 (600)
T PRK08279 49 RHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRG--A 124 (600)
T ss_pred hCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCH--H
Confidence 58999999986 6899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+++++
T Consensus 125 ~l~~~l~~~~ 134 (600)
T PRK08279 125 VLAHSLNLVD 134 (600)
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 62
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.41 E-value=4.6e-12 Score=114.61 Aligned_cols=86 Identities=22% Similarity=0.228 Sum_probs=81.8
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||.||.+++.++|..|.+.|+++|++|+++++|+++|+++++||+++|++++|++|.++. .
T Consensus 45 ~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~--~ 120 (567)
T PRK06178 45 ERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFRE--H 120 (567)
T ss_pred HCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCH--H
Confidence 48999999886 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++..++
T Consensus 121 ~~~~~l~~~~ 130 (567)
T PRK06178 121 ELSYELNDAG 130 (567)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 63
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.41 E-value=3e-12 Score=116.07 Aligned_cols=88 Identities=20% Similarity=0.162 Sum_probs=81.1
Q ss_pred cCCCceEEEeCCC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 74 VHYRLLFQIDAVT--DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 74 ~~pd~~al~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.+|+.+++..... .+.+||+|+.+++.++|++|+.+|+.+||+|+|++.|+++|+++.+||+.+|++.||+++++++
T Consensus 28 ~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~- 106 (613)
T COG1022 28 DRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYSTSTP- 106 (613)
T ss_pred cCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEecCCCCCH-
Confidence 4777778875543 4589999999999999999999999779999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.|++++++
T Consensus 107 -~~~~~iL~~se 117 (613)
T COG1022 107 -EQLAYILNESE 117 (613)
T ss_pred -HHHHHHHhcCC
Confidence 99999999887
No 64
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.41 E-value=3.3e-12 Score=115.31 Aligned_cols=86 Identities=33% Similarity=0.347 Sum_probs=82.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++. +
T Consensus 35 ~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~--~ 110 (557)
T PRK07059 35 QYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTP--R 110 (557)
T ss_pred HcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccCcccCH--H
Confidence 58999999985 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 111 ~~~~~~~~~~ 120 (557)
T PRK07059 111 ELEHQLKDSG 120 (557)
T ss_pred HHHHHHHccC
Confidence 9999998766
No 65
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.41 E-value=1.8e-12 Score=115.31 Aligned_cols=88 Identities=25% Similarity=0.274 Sum_probs=82.2
Q ss_pred ccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 73 VVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 73 ~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
+.+|+++++.+. +++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.
T Consensus 13 ~~~~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~~~~-- 89 (504)
T PRK07514 13 FADRDAPFIETP-DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTAYTL-- 89 (504)
T ss_pred hhCCCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCCCCH--
Confidence 378999998874 46799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++...++.++
T Consensus 90 ~~~~~~l~~~~ 100 (504)
T PRK07514 90 AELDYFIGDAE 100 (504)
T ss_pred HHHHHHHHhCC
Confidence 99999998665
No 66
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.40 E-value=1.5e-12 Score=115.77 Aligned_cols=86 Identities=23% Similarity=0.237 Sum_probs=81.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++++||+||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 17 ~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 92 (513)
T PRK07656 17 RFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNTRYTA--D 92 (513)
T ss_pred HCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCcccCH--H
Confidence 58999999996 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++...++.++
T Consensus 93 ~~~~~l~~~~ 102 (513)
T PRK07656 93 EAAYILARGD 102 (513)
T ss_pred HHHHHHhhcC
Confidence 9999988666
No 67
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.40 E-value=1.9e-12 Score=116.41 Aligned_cols=86 Identities=21% Similarity=0.236 Sum_probs=82.4
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. +..+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 30 ~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 105 (545)
T PRK08162 30 VYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNTRLDA--A 105 (545)
T ss_pred HCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccccccCh--H
Confidence 58999999885 6789999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 106 ~~~~~l~~~~ 115 (545)
T PRK08162 106 SIAFMLRHGE 115 (545)
T ss_pred HHHHHHHhCC
Confidence 9999999777
No 68
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.40 E-value=3.3e-12 Score=114.95 Aligned_cols=91 Identities=20% Similarity=0.164 Sum_probs=82.7
Q ss_pred CCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 75 HYRLLFQIDAVTDITYTYDDILQKSLQLADALQKR-GYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 75 ~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.++++++++. ++++||.||.+++.++|.+|++. |++++++|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 16 ~~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~--~ 91 (529)
T PRK07867 16 EDDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRG--A 91 (529)
T ss_pred ccCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCCCCh--H
Confidence 4788999885 78999999999999999999987 89999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc--eeecch
Q psy16164 154 ELSQHCVGGL--ELQQKR 169 (214)
Q Consensus 154 ~l~~~l~~s~--~~~~~~ 169 (214)
++.+++++++ .+.+..
T Consensus 92 ~l~~~l~~~~~~~li~~~ 109 (529)
T PRK07867 92 ALARDIAHADCQLVLTES 109 (529)
T ss_pred HHHHHHHhCCCeEEEECH
Confidence 9999999776 444443
No 69
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.39 E-value=3.2e-12 Score=115.56 Aligned_cols=86 Identities=26% Similarity=0.159 Sum_probs=82.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|++|.++. +
T Consensus 36 ~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~--~ 111 (563)
T PRK06710 36 RYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNPLYTE--R 111 (563)
T ss_pred HCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccCcccCH--H
Confidence 58999999985 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+..++
T Consensus 112 ~l~~~l~~~~ 121 (563)
T PRK06710 112 ELEYQLHDSG 121 (563)
T ss_pred HHHHHHhccC
Confidence 9999998765
No 70
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.39 E-value=3.8e-12 Score=114.65 Aligned_cols=86 Identities=24% Similarity=0.212 Sum_probs=82.1
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||.||.+.++++|.+|.+.|+++|++|+++++|+++|+++++||+++|++++|+++.++. .
T Consensus 29 ~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~--~ 104 (542)
T PRK07786 29 MQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRLTP--P 104 (542)
T ss_pred HCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEEcCccCCH--H
Confidence 58999999986 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 105 ~~~~~l~~~~ 114 (542)
T PRK07786 105 EIAFLVSDCG 114 (542)
T ss_pred HHHHHHHhCC
Confidence 9999998766
No 71
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.39 E-value=3.6e-12 Score=115.38 Aligned_cols=86 Identities=23% Similarity=0.337 Sum_probs=81.3
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKR-GYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+++|+++. +..+||.||.++++++|+.|.+. |+++||+|+++++|+++|+++++||+++|++++|+++.++.
T Consensus 36 ~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~-- 111 (562)
T PRK12492 36 KFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTA-- 111 (562)
T ss_pred hCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeccCccCCH--
Confidence 58999999875 67999999999999999999984 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 112 ~~l~~~l~~~~ 122 (562)
T PRK12492 112 REMRHQFKDSG 122 (562)
T ss_pred HHHHHHHhccC
Confidence 99999999766
No 72
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.38 E-value=4e-12 Score=115.32 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=77.8
Q ss_pred cCCCceEEEeCC-------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDAV-------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|+++|+++.+ .++++||.||..++.++|.+|.+.| .+||+|+++++|+++|+++++||+++|++++|+++
T Consensus 13 ~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~~ 91 (578)
T PRK05850 13 LQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGALQAGLIAVPLSV 91 (578)
T ss_pred cCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHHHcCceEEecCC
Confidence 589999998632 1368999999999999999999999 68999999999999999999999999999999997
Q ss_pred C---CchhHHHHHHHhhcCc
Q psy16164 147 Q---YTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~---~~~~~~~l~~~l~~s~ 163 (214)
. ++. +++.+++++++
T Consensus 92 ~~~~~~~--~~l~~~l~~~~ 109 (578)
T PRK05850 92 PQGGAHD--ERVSAVLRDTS 109 (578)
T ss_pred CCccchH--HHHHHHHHhcC
Confidence 4 456 89999998776
No 73
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.38 E-value=2.3e-12 Score=114.42 Aligned_cols=85 Identities=19% Similarity=0.323 Sum_probs=79.8
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. +..+||.||.+++.++|++|.+.| .+|++|+|+++|+++|+++++||+++|++++|+++.+++ +
T Consensus 13 ~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~-~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 87 (487)
T PRK07638 13 LQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKE-SKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDIKWKQ--D 87 (487)
T ss_pred hCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCH--H
Confidence 58999999986 789999999999999999999988 489999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++..++
T Consensus 88 ~~~~~~~~~~ 97 (487)
T PRK07638 88 ELKERLAISN 97 (487)
T ss_pred HHHHHHHhCC
Confidence 9999988765
No 74
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.38 E-value=8.3e-12 Score=111.06 Aligned_cols=86 Identities=21% Similarity=0.216 Sum_probs=81.5
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||+||.+.+.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 18 ~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~--~ 93 (521)
T PRK06187 18 KHPDKEAVYFD--GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPINIRLKP--E 93 (521)
T ss_pred HCCCceEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEecccCCCH--H
Confidence 58999999986 6679999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++...++.++
T Consensus 94 ~~~~~i~~~~ 103 (521)
T PRK06187 94 EIAYILNDAE 103 (521)
T ss_pred HHHHHHHhcC
Confidence 9999998665
No 75
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.38 E-value=2.3e-12 Score=114.45 Aligned_cols=86 Identities=26% Similarity=0.269 Sum_probs=81.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||.||.+++.++|.+|.+.|+.+|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 14 ~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 89 (497)
T PRK06145 14 RTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPINYRLAA--D 89 (497)
T ss_pred HCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCH--H
Confidence 48999999886 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 90 ~~~~~l~~~~ 99 (497)
T PRK06145 90 EVAYILGDAG 99 (497)
T ss_pred HHHHHHHhcC
Confidence 9999998666
No 76
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.38 E-value=2.2e-12 Score=120.20 Aligned_cols=86 Identities=19% Similarity=0.091 Sum_probs=78.3
Q ss_pred cCCC-ceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYR-LLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd-~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+ ++|+.+. .++++||+||.++++++|++|.+. +++||+|+++++|+++|+++++||+++|++++|+|+.+++
T Consensus 216 ~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~-- 291 (718)
T PRK08043 216 RYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRIPAMMNYTAGV-- 291 (718)
T ss_pred HhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccccCcCH--
Confidence 4887 5777653 246899999999999999999987 5999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 292 ~~l~~~l~~s~ 302 (718)
T PRK08043 292 KGLTSAITAAE 302 (718)
T ss_pred HHHHHHHHHcC
Confidence 99999999877
No 77
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.38 E-value=5.4e-12 Score=112.72 Aligned_cols=88 Identities=27% Similarity=0.255 Sum_probs=83.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++..++..+||.||..++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 9 ~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~~~--~ 86 (511)
T PRK13391 9 TTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHLTP--A 86 (511)
T ss_pred hCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccccCH--H
Confidence 58999999876567889999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 87 ~l~~~l~~~~ 96 (511)
T PRK13391 87 EAAYIVDDSG 96 (511)
T ss_pred HHHHHHhccC
Confidence 9999998766
No 78
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.38 E-value=3.6e-12 Score=113.09 Aligned_cols=88 Identities=19% Similarity=0.236 Sum_probs=82.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+.+...+..+||.|+.+.+.++|.+|.+.|+++|++|+++++|+++|+++++||+++|++++|+++.+++ +
T Consensus 7 ~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~--~ 84 (488)
T PRK09088 7 LQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSA--S 84 (488)
T ss_pred hCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCH--H
Confidence 58999999875457899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 85 ~~~~~~~~~~ 94 (488)
T PRK09088 85 ELDALLQDAE 94 (488)
T ss_pred HHHHHHHhCC
Confidence 9999998766
No 79
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.37 E-value=2.7e-12 Score=115.86 Aligned_cols=86 Identities=27% Similarity=0.305 Sum_probs=81.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQ-KRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~-~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+++|+++. ++.+||+||.+++.++|..|. +.|+++|++|+++++|+++++++++||+++|++++|++|.++.
T Consensus 37 ~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~-- 112 (560)
T PRK08751 37 KFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTP-- 112 (560)
T ss_pred hCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCH--
Confidence 58999999875 789999999999999999996 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 113 ~~~~~~l~~~~ 123 (560)
T PRK08751 113 RELKHQLIDSG 123 (560)
T ss_pred HHHHHHHHhcC
Confidence 99999998766
No 80
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.37 E-value=3.9e-12 Score=125.05 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=82.6
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. +..+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|++|.++. +
T Consensus 470 ~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~--~ 545 (1296)
T PRK10252 470 KTPDAPALADA--RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPD--D 545 (1296)
T ss_pred hCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHH--H
Confidence 48999999986 6789999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 546 ~~~~~l~~~~ 555 (1296)
T PRK10252 546 RLKMMLEDAR 555 (1296)
T ss_pred HHHHHHHhCC
Confidence 9999999876
No 81
>PRK12467 peptide synthase; Provisional
Probab=99.37 E-value=2.3e-12 Score=137.32 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=84.0
Q ss_pred cccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 72 NVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 72 ~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
+..+||++|++++ ++++||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++||++|.++.
T Consensus 3105 a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~- 3181 (3956)
T PRK12467 3105 VARTPEAPALVFG--DQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPR- 3181 (3956)
T ss_pred HHhCCCcceEeeC--CcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChH-
Confidence 3359999999996 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 3182 -~rl~~il~~~~ 3192 (3956)
T PRK12467 3182 -ERLAYMIEDSG 3192 (3956)
T ss_pred -HHHHHHHhCCC
Confidence 99999999877
No 82
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.37 E-value=1.1e-11 Score=112.52 Aligned_cols=88 Identities=17% Similarity=0.118 Sum_probs=81.4
Q ss_pred cCCCceEEEeCC-CCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 74 VHYRLLFQIDAV-TDITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 74 ~~pd~~al~~~~-~~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.+|+++|+++.. .++.+||+||.+++.++|.+|.. .|+++||+|+++++|+++++++++||+++|++++|++|.++.
T Consensus 22 ~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~- 100 (576)
T PRK05620 22 VHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLNKQLMN- 100 (576)
T ss_pred hCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecccccCH-
Confidence 589999988643 24689999999999999999986 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.++++.++
T Consensus 101 -~~l~~~l~~~~ 111 (576)
T PRK05620 101 -DQIVHIINHAE 111 (576)
T ss_pred -HHHHHHHhccC
Confidence 99999999766
No 83
>PRK12467 peptide synthase; Provisional
Probab=99.37 E-value=2.1e-12 Score=137.54 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=83.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|++++ ++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|++|.++. +
T Consensus 1586 ~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~--~ 1661 (3956)
T PRK12467 1586 ATPEAVALVFG--EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPR--E 1661 (3956)
T ss_pred hCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCH--H
Confidence 59999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 1662 rl~~il~~~~ 1671 (3956)
T PRK12467 1662 RLAYMIEDSG 1671 (3956)
T ss_pred HHHHHHHhCC
Confidence 9999999887
No 84
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.37 E-value=9.6e-12 Score=110.92 Aligned_cols=86 Identities=22% Similarity=0.189 Sum_probs=81.8
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. +..+||.||.+.+.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 23 ~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~--~ 98 (523)
T PRK08316 23 RYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVNFMLTG--E 98 (523)
T ss_pred HCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCH--H
Confidence 58999999986 6899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.++.++
T Consensus 99 ~i~~~l~~~~ 108 (523)
T PRK08316 99 ELAYILDHSG 108 (523)
T ss_pred HHHHHHHhCC
Confidence 9999998655
No 85
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.36 E-value=6.9e-12 Score=112.79 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=81.2
Q ss_pred cCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 74 VHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 74 ~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.+|+++|+++.. .+..+||+||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|++|.++
T Consensus 34 ~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~ 113 (538)
T TIGR03208 34 NCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMPIFR 113 (538)
T ss_pred HCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccCcccC
Confidence 589999987521 2468999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++..++
T Consensus 114 ~--~~l~~~l~~~~ 125 (538)
T TIGR03208 114 E--RELSFMLNHAD 125 (538)
T ss_pred H--HHHHHHHHhcC
Confidence 9 99999998766
No 86
>PRK05691 peptide synthase; Validated
Probab=99.35 E-value=2.6e-12 Score=137.69 Aligned_cols=89 Identities=18% Similarity=0.205 Sum_probs=84.3
Q ss_pred ccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 71 PNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 71 ~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
++..+||++|+++. +..+||+||.++++++|..|.+.|+++|++|+|+++++++++++++|++++|+++||++|.+|.
T Consensus 3729 ~~~~~p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~ 3806 (4334)
T PRK05691 3729 QVAAHPQRIAASCL--DQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPA 3806 (4334)
T ss_pred HHHhCCCceEEEcC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChH
Confidence 34459999999986 7789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 3807 --~r~~~il~~~~ 3817 (4334)
T PRK05691 3807 --QRLQRIIELSR 3817 (4334)
T ss_pred --HHHHHHHHhcC
Confidence 99999999877
No 87
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.35 E-value=9.2e-12 Score=111.61 Aligned_cols=86 Identities=24% Similarity=0.187 Sum_probs=82.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. +..+||+|+.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++. +
T Consensus 19 ~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~--~ 94 (528)
T PRK07470 19 RFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNFRQTP--D 94 (528)
T ss_pred HCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCccCCH--H
Confidence 58999999985 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++..++
T Consensus 95 ~~~~~~~~~~ 104 (528)
T PRK07470 95 EVAYLAEASG 104 (528)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 88
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.35 E-value=6.2e-12 Score=111.78 Aligned_cols=86 Identities=12% Similarity=0.061 Sum_probs=80.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. +..+||.||.+++.++|..|.+.|+++|++|+++++|+.+|+++++||+++|++++|+++.++. +
T Consensus 12 ~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~--~ 87 (502)
T TIGR01734 12 TYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVDTSIPS--E 87 (502)
T ss_pred HCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCCCcChH--H
Confidence 48999999875 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+...+
T Consensus 88 ~~~~~~~~~~ 97 (502)
T TIGR01734 88 RIEMIIEAAG 97 (502)
T ss_pred HHHHHHHhcC
Confidence 9988888655
No 89
>PRK05691 peptide synthase; Validated
Probab=99.35 E-value=4.9e-12 Score=135.66 Aligned_cols=86 Identities=21% Similarity=0.179 Sum_probs=83.1
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|+++||++|.++. +
T Consensus 2200 ~~p~~~Av~~~--~~~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~l~~~~s~~~vv~~lailkaG~~~vpld~~~p~--~ 2275 (4334)
T PRK05691 2200 RTPQAPALTFA--GQTLSYAELDARANRLARALRERGVGPQVRVGLALERSLEMVVGLLAILKAGGAYVPLDPEYPL--E 2275 (4334)
T ss_pred HCCCCeEEEeC--CeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcEeecCCCCChH--H
Confidence 49999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 2276 rl~~il~~~~ 2285 (4334)
T PRK05691 2276 RLHYMIEDSG 2285 (4334)
T ss_pred HHHHHHHhcC
Confidence 9999999877
No 90
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=4.3e-12 Score=114.29 Aligned_cols=88 Identities=23% Similarity=0.147 Sum_probs=79.6
Q ss_pred cCCCceEEEeCCC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 74 VHYRLLFQIDAVT--DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 74 ~~pd~~al~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.+|+..++.+... .+.+||.||.++++++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|++|.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~- 100 (539)
T PRK07008 22 HAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINPRLFP- 100 (539)
T ss_pred hCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecccccCH-
Confidence 3677777765322 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.++++.++
T Consensus 101 -~~l~~~l~~~~ 111 (539)
T PRK07008 101 -EQIAYIVNHAE 111 (539)
T ss_pred -HHHHHHHhccC
Confidence 99999998766
No 91
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.34 E-value=9e-12 Score=111.78 Aligned_cols=86 Identities=20% Similarity=0.164 Sum_probs=82.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||+|+..+++++|..|.+.|+++|++|+++++|+++|+++++||+++|++++++++.++. +
T Consensus 35 ~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~--~ 110 (527)
T TIGR02275 35 RYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLALFSHRK--S 110 (527)
T ss_pred HCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccccccCH--H
Confidence 58999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.+..++
T Consensus 111 ~~~~~l~~~~ 120 (527)
T TIGR02275 111 ELTAYAQQIE 120 (527)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 92
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.34 E-value=1.6e-11 Score=109.43 Aligned_cols=86 Identities=24% Similarity=0.303 Sum_probs=81.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++++.+. ++++||+|+..++.++|..|.+.|+.+|++|+++++|+++++++++||+.+|++++|+++.++. +
T Consensus 12 ~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~--~ 87 (515)
T TIGR03098 12 RLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLKA--E 87 (515)
T ss_pred HCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCCCCCH--H
Confidence 58999999986 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++..+++.++
T Consensus 88 ~~~~~l~~~~ 97 (515)
T TIGR03098 88 QVAHILADCN 97 (515)
T ss_pred HHHHHHHcCC
Confidence 9999998765
No 93
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.34 E-value=1.1e-11 Score=113.37 Aligned_cols=89 Identities=16% Similarity=0.103 Sum_probs=77.7
Q ss_pred cCCCceEEEeCC-------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEec-C
Q psy16164 74 VHYRLLFQIDAV-------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSI-N 145 (214)
Q Consensus 74 ~~pd~~al~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl-~ 145 (214)
.+|+++|+++.+ ..+.+||+||.+++.++|++|.+. +++||+|+++++|+++|+++++||+++|++++|+ +
T Consensus 46 ~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 46 NVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred hCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCC
Confidence 589999988632 124899999999999999999986 9999999999999999999999999999999999 5
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
+.++...+++.+++++++
T Consensus 125 ~~~~~~~~~l~~~l~~~~ 142 (612)
T PRK12476 125 PELPGHAERLDTALRDAE 142 (612)
T ss_pred CCcchhHHHHHHHHHhCC
Confidence 777621289999999876
No 94
>PRK12316 peptide synthase; Provisional
Probab=99.34 E-value=4.6e-12 Score=137.08 Aligned_cols=86 Identities=19% Similarity=0.225 Sum_probs=83.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||+||.++++++|..|.+.|+++|++|+++++++++|+++++|++++|+++||++|.+|. +
T Consensus 3069 ~~p~~~Av~~~--~~~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l~~~~s~~~iv~~lail~aGa~~vpld~~~p~--~ 3144 (5163)
T PRK12316 3069 RTPDAVALAFG--EQRLSYAELNRRANRLAHRLIERGVGPDVLVGVAVERSLEMVVGLLAILKAGGAYVPLDPEYPE--E 3144 (5163)
T ss_pred hCCCCeeEeeC--CeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHHHHhCceeeecCCCCcH--H
Confidence 49999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 3145 rl~~il~~~~ 3154 (5163)
T PRK12316 3145 RLAYMLEDSG 3154 (5163)
T ss_pred HHHHHHHhcC
Confidence 9999999887
No 95
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.33 E-value=7.5e-12 Score=111.10 Aligned_cols=86 Identities=8% Similarity=-0.023 Sum_probs=81.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++++.+. ++.+||.||.+.+.++|..|.+.|+++|++|+++++|+.+|+++++||+++|++++|+++.++. +
T Consensus 14 ~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~--~ 89 (503)
T PRK04813 14 TQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDVSSPA--E 89 (503)
T ss_pred hCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCCCChH--H
Confidence 48999999875 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+.++.++
T Consensus 90 ~~~~~~~~~~ 99 (503)
T PRK04813 90 RIEMIIEVAK 99 (503)
T ss_pred HHHHHHHhcC
Confidence 9988888654
No 96
>KOG1179|consensus
Probab=99.33 E-value=8.6e-12 Score=109.65 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=86.1
Q ss_pred cccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 70 QPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 70 ~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.++.++|+++|+++.++++.+||+|+.+++.++|+.|...|++.||.|+++++|++|++.+++|..++|++..-+|++..
T Consensus 85 ~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~iNtNlR 164 (649)
T KOG1179|consen 85 SQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFINTNLR 164 (649)
T ss_pred HHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeeeccccc
Confidence 44446999999999866789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +.+.+.++-|+
T Consensus 165 ~--~~LlHsi~~s~ 176 (649)
T KOG1179|consen 165 G--EPLLHSITVSG 176 (649)
T ss_pred c--chhhhhhhhcC
Confidence 9 99999999766
No 97
>PRK12316 peptide synthase; Provisional
Probab=99.33 E-value=8.9e-12 Score=134.92 Aligned_cols=86 Identities=19% Similarity=0.233 Sum_probs=83.1
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. ++.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|+++||++|.++. +
T Consensus 2015 ~~p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~--~ 2090 (5163)
T PRK12316 2015 RAPEAIAVVFG--DQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPA--E 2090 (5163)
T ss_pred hCCCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCH--H
Confidence 59999999986 7799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 2091 rl~~il~~~~ 2100 (5163)
T PRK12316 2091 RLAYMLEDSG 2100 (5163)
T ss_pred HHHHHHHhcC
Confidence 9999999877
No 98
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.33 E-value=1.5e-11 Score=110.07 Aligned_cols=86 Identities=20% Similarity=0.183 Sum_probs=81.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. +..+||.||.+.+.+++..|.+.|+++|++|+++++|+++++++++||+++|++++|++|.++. +
T Consensus 24 ~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~ 99 (524)
T PRK06188 24 RYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHPLGSL--D 99 (524)
T ss_pred HCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecccCCCH--H
Confidence 58999999986 6799999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++..++
T Consensus 100 ~~~~~l~~~~ 109 (524)
T PRK06188 100 DHAYVLEDAG 109 (524)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 99
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.32 E-value=1e-11 Score=105.36 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=79.1
Q ss_pred ccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 71 PNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 71 ~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
.++.+||++|++++ ++.+||+||.++++++|.+|+++|+++||+|.+-+||..++.+++||.+++|.++|..-|....
T Consensus 37 ~A~~~pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlALpsHr~ 114 (542)
T COG1021 37 HAARYPDRIAVIDG--ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLALPSHRA 114 (542)
T ss_pred HHhhcCCceEEecC--cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhccchhhH
Confidence 34469999999997 6789999999999999999999999999999999999999999999999999998877776666
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
.|+.+-...++
T Consensus 115 --~Ei~~f~~~~e 125 (542)
T COG1021 115 --SELGAFASQIE 125 (542)
T ss_pred --HHHHHHHHhhc
Confidence 88877666544
No 100
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.32 E-value=9.8e-12 Score=112.35 Aligned_cols=86 Identities=26% Similarity=0.352 Sum_probs=81.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQ-KRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~-~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+++|+++. ++.+||.||.+++.++|..|. +.|+++|++|+++++|+++++++++||+++|++++|++|.++.
T Consensus 35 ~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~-- 110 (560)
T PRK08974 35 RYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPLYTP-- 110 (560)
T ss_pred hCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccCccCCH--
Confidence 58999999985 789999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++..++
T Consensus 111 ~~~~~~l~~~~ 121 (560)
T PRK08974 111 RELEHQLNDSG 121 (560)
T ss_pred HHHHHHHHhcC
Confidence 99999998765
No 101
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.31 E-value=4.6e-11 Score=109.71 Aligned_cols=89 Identities=19% Similarity=0.145 Sum_probs=76.4
Q ss_pred cCCCceEEEeCC-------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEec-C
Q psy16164 74 VHYRLLFQIDAV-------TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSI-N 145 (214)
Q Consensus 74 ~~pd~~al~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl-~ 145 (214)
.+|+++|+++.+ ..+.+||+||.+++.++|++|.+. +++||+|+++++|+++|+++++||+++|++++|+ +
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~ 111 (631)
T PRK07769 33 VRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFD 111 (631)
T ss_pred hCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCC
Confidence 589999998631 125899999999999999999986 8999999999999999999999999999999999 4
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
+..+...+++.+++++++
T Consensus 112 ~~~~~~~~~l~~~l~~~~ 129 (631)
T PRK07769 112 PAEPGHVGRLHAVLDDCT 129 (631)
T ss_pred CCccchHHHHHHHHHhCC
Confidence 555422278999998766
No 102
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.30 E-value=1.3e-11 Score=108.75 Aligned_cols=86 Identities=20% Similarity=0.175 Sum_probs=81.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+.+. ++.+||.||.+.++++|..|.+.|+.+|++|+++++|+++++++++||+++|++++|+++.+++ +
T Consensus 15 ~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~--~ 90 (458)
T PRK09029 15 VRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQ--P 90 (458)
T ss_pred hCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCH--H
Confidence 58999999875 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++.+++
T Consensus 91 ~~~~~~~~~~ 100 (458)
T PRK09029 91 LLEELLPSLT 100 (458)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 103
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.30 E-value=2.6e-11 Score=108.15 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=81.9
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. +..+||.|+.++++++|..|.+.|+++|++|+++++|+++|+++++||+++|++++|+++.++. +
T Consensus 17 ~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~--~ 92 (508)
T TIGR02262 17 GRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLLTA--D 92 (508)
T ss_pred ccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccCCCCH--H
Confidence 48999999885 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.++++.++
T Consensus 93 ~l~~~~~~~~ 102 (508)
T TIGR02262 93 DYAYMLEDSR 102 (508)
T ss_pred HHHHHHHhcC
Confidence 9999998766
No 104
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=9.5e-12 Score=112.01 Aligned_cols=81 Identities=12% Similarity=0.224 Sum_probs=74.5
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
..|+.+++.+.+.+..+||.||..++.++|++|.+.|+++||+|+++++|+++|+++++||+++|++++|+++..+. +
T Consensus 14 ~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~~~~~--~ 91 (545)
T PRK07768 14 TSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQPTPR--T 91 (545)
T ss_pred CCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCCCCCc--c
Confidence 47899999877667799999999999999999999999999999999999999999999999999999999998886 5
Q ss_pred HHH
Q psy16164 154 ELS 156 (214)
Q Consensus 154 ~l~ 156 (214)
++.
T Consensus 92 ~~~ 94 (545)
T PRK07768 92 DLA 94 (545)
T ss_pred hhH
Confidence 443
No 105
>KOG1176|consensus
Probab=99.26 E-value=4.2e-11 Score=107.53 Aligned_cols=99 Identities=19% Similarity=0.297 Sum_probs=83.6
Q ss_pred CCCc-eEEEeCCC-CeeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 75 HYRL-LFQIDAVT-DITYTYDDILQKSLQLADALQKRG--YRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 75 ~pd~-~al~~~~~-~~~~Ty~el~~~~~~la~~L~~~G--l~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
++++ +.+++... |+.+||.|+.+++.++|.+|.++| +++||+|++++||++++..+++||+..|++..|+||.+.+
T Consensus 29 ~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~ 108 (537)
T KOG1176|consen 29 YLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTA 108 (537)
T ss_pred cccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCH
Confidence 4444 66666532 689999999999999999999775 8889999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc--eeecchHHHhhh
Q psy16164 151 VVKELSQHCVGGL--ELQQKRVEIGAL 175 (214)
Q Consensus 151 ~~~~l~~~l~~s~--~~~~~~~~~~~~ 175 (214)
.++.+.+.+++ .+.+.......+
T Consensus 109 --~ei~~~~~~s~~kiif~d~~~~~~i 133 (537)
T KOG1176|consen 109 --SEIAKQLKDSKPKLIFVDEDFYDKI 133 (537)
T ss_pred --HHHHHHHHhcCCeEEEEcCchHHHH
Confidence 99999999877 444544444444
No 106
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.26 E-value=3.8e-11 Score=116.63 Aligned_cols=86 Identities=20% Similarity=0.171 Sum_probs=80.5
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++. .++++||+|+.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|++++|+|+.+++ +
T Consensus 627 ~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~--~ 702 (1146)
T PRK08633 627 RNWSRLAVADS-TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNYTASE--A 702 (1146)
T ss_pred hcCCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCCCcCH--H
Confidence 58999999875 46799999999999999999987 58999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 703 ~~~~~l~~~~ 712 (1146)
T PRK08633 703 ALKSAIEQAQ 712 (1146)
T ss_pred HHHHHHHHcC
Confidence 9999999776
No 107
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.25 E-value=5.9e-11 Score=105.95 Aligned_cols=80 Identities=23% Similarity=0.278 Sum_probs=75.3
Q ss_pred EEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHh
Q psy16164 80 FQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHC 159 (214)
Q Consensus 80 al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l 159 (214)
|++++ ++.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++|++++|++++|+++.++. +++.+.+
T Consensus 4 ~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~--~~~~~~l 79 (509)
T PRK12406 4 TIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKP--EEIAYIL 79 (509)
T ss_pred EEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCH--HHHHHHH
Confidence 45554 7899999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred hcCc
Q psy16164 160 VGGL 163 (214)
Q Consensus 160 ~~s~ 163 (214)
+.++
T Consensus 80 ~~~~ 83 (509)
T PRK12406 80 EDSG 83 (509)
T ss_pred hccC
Confidence 9766
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.24 E-value=1.3e-10 Score=105.66 Aligned_cols=94 Identities=14% Similarity=0.144 Sum_probs=75.8
Q ss_pred hccccc-CCCceEEEeCCC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecC
Q psy16164 69 IQPNVV-HYRLLFQIDAVT--DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 69 ~~~~~~-~pd~~al~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~ 145 (214)
+...+. +|+. ++++... .+.+||.||..++.++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|++
T Consensus 27 ~~~~~~~~~~~-~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~ 105 (579)
T PRK09192 27 LDYAALGEAGM-NFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLP 105 (579)
T ss_pred HHHhhccCCce-EEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEecc
Confidence 334444 4544 4444322 26799999999999999999999999999999999999999999999999999999998
Q ss_pred CCCch-----hHHHHHHHhhcCc
Q psy16164 146 PQYTE-----VVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~-----~~~~l~~~l~~s~ 163 (214)
+.++. ..+++.++++.++
T Consensus 106 ~~~~~~~~~~~~~~l~~~i~~~~ 128 (579)
T PRK09192 106 LPMGFGGRESYIAQLRGMLASAQ 128 (579)
T ss_pred CCcccccchHHHHHHHHHHHhcC
Confidence 75431 1278899998765
No 109
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.24 E-value=4.7e-11 Score=107.48 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=78.5
Q ss_pred cccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 70 QPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 70 ~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
...+. ||++|+++. ++.+||.||.+++.++|..|.+.|+++|++|+++++|+++|+++++||+++|+++++..+..+
T Consensus 32 ~~~a~-p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~ 108 (536)
T PRK10946 32 TRHAA-SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQ 108 (536)
T ss_pred HHhhC-CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCcccc
Confidence 33334 999999986 778999999999999999999999999999999999999999999999999998777776666
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. .++...+.+++
T Consensus 109 ~--~~~~~~~~~~~ 120 (536)
T PRK10946 109 R--SELNAYASQIE 120 (536)
T ss_pred H--HHHHHHHhhcC
Confidence 6 78887777655
No 110
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.23 E-value=4.4e-11 Score=116.50 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=77.9
Q ss_pred cCC-CceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHY-RLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~p-d~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
++| ++.++.+. +++++||+|+.++++++|+.|++ |+++||+|+++++|+++++++++||+++|++++|+|+.+++
T Consensus 643 ~~~~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~-- 718 (1140)
T PRK06814 643 IHGFKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINFSAGI-- 718 (1140)
T ss_pred HcCCCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCCCCCH--
Confidence 465 56777653 36789999999999999999976 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 719 ~~l~~~l~~~~ 729 (1140)
T PRK06814 719 ANILSACKAAQ 729 (1140)
T ss_pred HHHHHHHHHcC
Confidence 99999999776
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.19 E-value=1.2e-10 Score=103.71 Aligned_cols=76 Identities=28% Similarity=0.321 Sum_probs=73.1
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 86 TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 86 ~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
.+..+||.||.+.+.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++. +++.+++.+++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~--~~~~~~~~~~~ 83 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTA--AEIAYIVDDSG 83 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCH--HHHHHHHhcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999 99999998766
No 112
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.17 E-value=1.5e-10 Score=102.54 Aligned_cols=82 Identities=12% Similarity=0.063 Sum_probs=76.1
Q ss_pred ccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 73 VVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 73 ~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
++.++++|+++. ++++||.||.++++++|..|+ ++|+|+++++|+++|+++++||+++|++++|+++.++.
T Consensus 11 ~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~-- 81 (471)
T PRK07787 11 AAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGV-- 81 (471)
T ss_pred cccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCh--
Confidence 457899999885 789999999999999999996 46999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++.+++
T Consensus 82 ~~l~~~l~~~~ 92 (471)
T PRK07787 82 AERRHILADSG 92 (471)
T ss_pred HHHHHHHHhcC
Confidence 99999998776
No 113
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.11 E-value=4.6e-10 Score=100.91 Aligned_cols=70 Identities=24% Similarity=0.281 Sum_probs=62.6
Q ss_pred cCCCceEEEeCCCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDAVTD--ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~~~~--~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|+++|+++.+.+ +++||+||.++++++|..|.+. ++||+|+++++|+++|+++++||+++|++++ +++
T Consensus 14 ~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~ 85 (525)
T PRK05851 14 ASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILP 85 (525)
T ss_pred CCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCC
Confidence 48999999987433 6899999999999999999987 8999999999999999999999999999864 454
No 114
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.11 E-value=3.9e-10 Score=98.32 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=71.2
Q ss_pred EEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhh
Q psy16164 81 QIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCV 160 (214)
Q Consensus 81 l~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~ 160 (214)
+++. ++++||.||.++++++|..|. .|+++|++|+++++|+++++.+++|++++|++++|+++..+. +++.+++.
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~--~~~~~~~~ 76 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPK--EAAIRMAK 76 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCH--HHHHHHHH
Confidence 4443 679999999999999999985 689999999999999999999999999999999999999999 88888887
Q ss_pred cCc
Q psy16164 161 GGL 163 (214)
Q Consensus 161 ~s~ 163 (214)
+++
T Consensus 77 ~~~ 79 (414)
T PRK08308 77 RAG 79 (414)
T ss_pred hCC
Confidence 655
No 115
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.10 E-value=3.4e-10 Score=100.22 Aligned_cols=73 Identities=22% Similarity=0.192 Sum_probs=69.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 89 TYTYDDILQKSLQLADALQKRGY-RRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
.+.|+||.+++.++|.+|.+.|+ .+|++|+++++|+++++++++||+++|++++|+||.++. .++.+++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~--~~~~~~~~~~~ 92 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQ--QEWQQVLNLVQ 92 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCH--HHHHHHHHhcC
Confidence 47899999999999999999988 579999999999999999999999999999999999999 99999999776
No 116
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.08 E-value=4.6e-10 Score=97.99 Aligned_cols=71 Identities=28% Similarity=0.426 Sum_probs=68.4
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 91 TYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 91 Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
||+|+.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++. +++..++.+++
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~--~~~~~~~~~~~ 71 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTE--NERTNQLEDLD 71 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCH--HHHHHHHHhcC
Confidence 799999999999999999999999999999999999999999999999999999999999 99998888666
No 117
>KOG1180|consensus
Probab=99.02 E-value=8.3e-09 Score=90.99 Aligned_cols=98 Identities=13% Similarity=0.190 Sum_probs=83.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCE-EEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc--e
Q psy16164 88 ITYTYDDILQKSLQLADALQKRGYRRGDI-VSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL--E 164 (214)
Q Consensus 88 ~~~Ty~el~~~~~~la~~L~~~Gl~~gd~-V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~--~ 164 (214)
.++||.|+..++..+|++|.++|+++++. +.|+++.+.+|+++++||++.+..+|.++.++++ +.+.|-+++++ .
T Consensus 88 ~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGe--eal~hsl~Et~~~~ 165 (678)
T KOG1180|consen 88 KWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGE--EALIHSLNETESTA 165 (678)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcCh--hhhhhhhccccceE
Confidence 58999999999999999999999997776 9999999999999999999999999999999999 99999999776 4
Q ss_pred eecchHHHhhhhh--hhcccccccc
Q psy16164 165 LQQKRVEIGALAE--ETNSLLKKNV 187 (214)
Q Consensus 165 ~~~~~~~~~~~~~--~~~~~l~~ii 187 (214)
+.+....+.++.. ...+.++.+|
T Consensus 166 i~T~~~LL~kl~~~l~~~~~vk~II 190 (678)
T KOG1180|consen 166 IFTDSELLPKLKAPLKQAKTVKHII 190 (678)
T ss_pred EEeCHHHHHHHHHHHhccCceeEEE
Confidence 5555444443332 3345677777
No 118
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.97 E-value=2.9e-09 Score=97.83 Aligned_cols=90 Identities=18% Similarity=0.252 Sum_probs=84.2
Q ss_pred cccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 70 QPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 70 ~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.++...|+..|+.+. +.++||+|+..++.++|..|...|+.+++.|+++.+++++++++.+|++++|+.++|++|.++
T Consensus 235 ~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P 312 (642)
T COG1020 235 EQAATTPDAVALVRG--GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYP 312 (642)
T ss_pred HHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCCh
Confidence 334469999999886 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++.++.
T Consensus 313 ~--~r~~~~l~~~~ 324 (642)
T COG1020 313 A--ERLAYILEDSR 324 (642)
T ss_pred H--HHHHHHHhhcC
Confidence 9 99999999887
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=98.95 E-value=3.5e-09 Score=91.47 Aligned_cols=71 Identities=24% Similarity=0.328 Sum_probs=68.1
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 91 TYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 91 Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
||.|+.+.+.++|..|.+ .|+++||+|+++++|+++++++++||++.|++++|+++.++. +++.+.++.++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~--~~~~~~l~~~~ 72 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPA--ERLAFILEDAG 72 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCH--HHHHHHHHhcC
Confidence 799999999999999998 899999999999999999999999999999999999999999 99999988766
No 120
>KOG1175|consensus
Probab=98.94 E-value=5.3e-09 Score=94.71 Aligned_cols=87 Identities=23% Similarity=0.303 Sum_probs=78.7
Q ss_pred CCCceEEEeCCC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 75 HYRLLFQIDAVT----DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 75 ~pd~~al~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
.++.++.++... ...+||.|+.+.+.++|..|.+.|+++||+|++++|+.++++++++||.++|++.+++...+++
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~ 157 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSA 157 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCH
Confidence 467888765421 2358999999999999999998899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
.++++++.+++
T Consensus 158 --~~l~~Rl~~~~ 168 (626)
T KOG1175|consen 158 --KELLDRLQDSK 168 (626)
T ss_pred --HHHHHHHHhcC
Confidence 99999999877
No 121
>KOG3628|consensus
Probab=98.63 E-value=1.6e-07 Score=88.21 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=72.0
Q ss_pred HHHHhh-cccccCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCCcHHHHHHHHHHc
Q psy16164 64 FIFQYI-QPNVVHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKR-GYRRGDIVSICSENRLDYPVLIVAASLL 137 (214)
Q Consensus 64 ~~~~~~-~~~~~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~-Gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 137 (214)
.+.+.+ .+++++||.+|+.... ++..+||+++..++.+++..|.+. -+++||.|+++.+++.|++++++||+.+
T Consensus 771 ~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~ 850 (1363)
T KOG3628|consen 771 TILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYL 850 (1363)
T ss_pred HHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhc
Confidence 334444 4555799999987532 245899999999999999999866 5999999999999999999999999999
Q ss_pred CCEEEecCCCCc
Q psy16164 138 GITVSSINPQYT 149 (214)
Q Consensus 138 G~i~vpl~~~~~ 149 (214)
|++++|+-|.-.
T Consensus 851 GliPIpv~p~~~ 862 (1363)
T KOG3628|consen 851 GLIPIPVPPPHA 862 (1363)
T ss_pred CeeeeccCCccH
Confidence 999999977543
No 122
>PLN03051 acyl-activating enzyme; Provisional
Probab=97.56 E-value=8.1e-05 Score=66.63 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=39.5
Q ss_pred eCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 121 SENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 121 ~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
++|+++++++++||+++|+++||+|+.++. +++.|++++++
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~--~el~~~l~~~~ 41 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSA--KEIATRLDISG 41 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCH--HHHHHHHHhcC
Confidence 589999999999999999999999999999 99999999877
No 123
>KOG1178|consensus
Probab=95.36 E-value=0.009 Score=57.72 Aligned_cols=62 Identities=29% Similarity=0.324 Sum_probs=60.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 88 ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 88 ~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
.++||+.....+..+++.|...|...|+.|++++..+.++++..++++++|..++|++|.++
T Consensus 68 ~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~ 129 (1032)
T KOG1178|consen 68 DSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWP 129 (1032)
T ss_pred cchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999
No 124
>KOG3628|consensus
Probab=95.27 E-value=0.052 Score=52.42 Aligned_cols=84 Identities=20% Similarity=0.315 Sum_probs=70.2
Q ss_pred CCCceEEEeCC-CC--eeeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEeCCC--CcHHHHHHHHHHcCCEEEecCCCC
Q psy16164 75 HYRLLFQIDAV-TD--ITYTYDDILQKSLQLAD-ALQKRGYRRGDIVSICSENR--LDYPVLIVAASLLGITVSSINPQY 148 (214)
Q Consensus 75 ~pd~~al~~~~-~~--~~~Ty~el~~~~~~la~-~L~~~Gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~i~vpl~~~~ 148 (214)
++...|.++-+ .| ..+||..+..++.++|. .|.+-|++++|+|.++...+ .++++..++|...|.+.+|+++.+
T Consensus 107 s~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~ 186 (1363)
T KOG3628|consen 107 SATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELS 186 (1363)
T ss_pred CCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhh
Confidence 55566765432 23 47999999999999999 67778999999999998865 799999999999999999999988
Q ss_pred chhHHHHHHHhh
Q psy16164 149 TEVVKELSQHCV 160 (214)
Q Consensus 149 ~~~~~~l~~~l~ 160 (214)
+. +++.-.++
T Consensus 187 s~--~el~~i~~ 196 (1363)
T KOG3628|consen 187 SS--EELKDIVN 196 (1363)
T ss_pred hh--hhhhcccC
Confidence 88 88766665
No 125
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.37 E-value=0.55 Score=41.57 Aligned_cols=84 Identities=24% Similarity=0.109 Sum_probs=61.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC--CcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc--e
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENR--LDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL--E 164 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~--~ 164 (214)
.+|..|+...+..+|+.|...|..+||+|..+..-+ ..-+...+|+.++|+.+.|+++... +.....+.+-+ +
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~---~~~~~l~~df~~tv 185 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNT---ERQLELMKDFKPTV 185 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccH---HHHHHHHHhcCCcE
Confidence 589999999999999999999999999988776611 1226789999999999999999665 34444444433 4
Q ss_pred eecchHHHhhh
Q psy16164 165 LQQKRVEIGAL 175 (214)
Q Consensus 165 ~~~~~~~~~~~ 175 (214)
+......+..+
T Consensus 186 I~~tps~~l~l 196 (438)
T COG1541 186 IAATPSYLLYL 196 (438)
T ss_pred EEEChHHHHHH
Confidence 54444443333
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=83.60 E-value=8.5 Score=34.11 Aligned_cols=58 Identities=21% Similarity=0.393 Sum_probs=45.9
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCc--HHHHHHHHHHcCCEEEecCC
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLD--YPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|..++...+...++.+...|+.+||++.++.+-... .....+++...|+..+|...
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~ 164 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK 164 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc
Confidence 47889998888888888888899999999998875543 23456788899999887653
No 127
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=66.98 E-value=84 Score=27.31 Aligned_cols=72 Identities=26% Similarity=0.157 Sum_probs=50.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC--cHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL--DYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
.+|..++......+++.+...|+.+||++....+... ..+...++....|+..+++.+..+ +.+...+.+-+
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~i~~~~ 167 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQT---EKQVQLIQDFK 167 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCCH---HHHHHHHHHHC
Confidence 4677787776666777777789999999887665443 223345678889999999887654 55555555433
No 128
>KOG1177|consensus
Probab=63.55 E-value=48 Score=30.18 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=57.7
Q ss_pred CCCceEE---EeCCCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC--CCCcHHHHHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQ---IDAVTD----ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSE--NRLDYPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al---~~~~~~----~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~--n~~~~~~~~lA~~~~G~i~vpl~ 145 (214)
.||.++- ..+.+| ..+|--.+.+.+..++..+ |+...+++++-.| .+.-+++..+|++..|+..|--.
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~ 308 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPA 308 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeC
Confidence 5665553 345444 3788888888887666554 6666566665544 33445677889999999999889
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
|.+.+ .+....+..-+
T Consensus 309 ~~f~~--k~alqai~~ek 324 (596)
T KOG1177|consen 309 PSFDP--KDALQAISNEK 324 (596)
T ss_pred CCCCh--HHHHHHHHhhc
Confidence 99988 77766665433
No 129
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=57.62 E-value=68 Score=25.58 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=37.2
Q ss_pred HHcCCCCCCEEEEEeCCCC--cHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhh
Q psy16164 107 QKRGYRRGDIVSICSENRL--DYPVLIVAASLLGITVSSINPQYTEVVKELSQHCV 160 (214)
Q Consensus 107 ~~~Gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~ 160 (214)
...|+.++|++. .+|-.- -....+++++..|+..+.. +.+.+ ++....++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~--~~~l~~i~ 222 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDP--ARLDQIAE 222 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCH--HHHHHHHH
Confidence 556899999999 888443 2234688999999998877 68887 77665554
No 130
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=56.83 E-value=34 Score=25.10 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCC---CCcHHHHHHHHHHcCCEEE
Q psy16164 100 LQLADALQKRGYRRGDIVSICSEN---RLDYPVLIVAASLLGITVS 142 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n---~~~~~~~~lA~~~~G~i~v 142 (214)
..+...|.++|+.+++.|.+++.. ......+++.+-.+|.--|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467777888999999999999865 4455566667777775533
No 131
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=54.18 E-value=30 Score=29.69 Aligned_cols=57 Identities=19% Similarity=0.164 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC---CchhHHHHHHHhh
Q psy16164 101 QLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ---YTEVVKELSQHCV 160 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~---~~~~~~~l~~~l~ 160 (214)
.+-..|..+|+++||.|.+- ..-|....-|+..+|+.+|.++.. +..+.+.+...++
T Consensus 52 Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~ 111 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAIT 111 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHH
T ss_pred HHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhc
Confidence 34456667899999999887 566777788899999998877654 2223366666665
No 132
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=46.97 E-value=38 Score=26.70 Aligned_cols=35 Identities=20% Similarity=0.431 Sum_probs=30.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC
Q psy16164 88 ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSE 122 (214)
Q Consensus 88 ~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~ 122 (214)
.-+||.++...+.++|..+.+-|.+|+-.|++.-.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRG 39 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARG 39 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCC
Confidence 46899999999999999999999999877777644
No 133
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=44.49 E-value=22 Score=22.95 Aligned_cols=31 Identities=29% Similarity=0.357 Sum_probs=19.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSI 119 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i 119 (214)
.+.|-+-.-+...+-..|++.|++.||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 3444444445555667888899999999976
No 134
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=43.39 E-value=75 Score=27.80 Aligned_cols=59 Identities=15% Similarity=0.037 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCC---chhHHHHHHHhhc
Q psy16164 100 LQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQY---TEVVKELSQHCVG 161 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~---~~~~~~l~~~l~~ 161 (214)
..+.-.|+.+|+++||-|.+- +.-|+...=++...|+.+|-+|..- .-+.+.+...++.
T Consensus 60 ~AL~laL~al~ig~GDeVI~p---s~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~ 121 (374)
T COG0399 60 AALHLALLALAIGPGDEVIVP---SFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP 121 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEec---CCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc
Confidence 345556677789999976654 6778889999999999998877652 2222666666654
No 135
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=41.42 E-value=35 Score=22.00 Aligned_cols=23 Identities=48% Similarity=0.667 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEE
Q psy16164 98 KSLQLADALQKRGYRRGDIVSIC 120 (214)
Q Consensus 98 ~~~~la~~L~~~Gl~~gd~V~i~ 120 (214)
+...+-..|++.|++.||.|-|.
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 41 KKLGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHCCHHHHHHHcCCCCCCEEEEc
Confidence 33345567788999999999875
No 136
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=40.86 E-value=1.3e+02 Score=23.96 Aligned_cols=66 Identities=17% Similarity=0.123 Sum_probs=45.6
Q ss_pred ceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCCCCch
Q psy16164 78 LLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 78 ~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
++++++++ .....-.++.+.+.++++.|.+.| ..|++.-.+-. =.+.=++...|+.++-++|.+..
T Consensus 16 ~i~V~~gs-~~~~~~~~~~~~a~~lg~~la~~g------~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~~~~ 82 (205)
T COG1611 16 QIVVICGS-ARGIEPEEYYELARELGRELAKRG------LLVITGGGPGVMEAVARGALEAGGLVVGILPGLLH 82 (205)
T ss_pred eEEEEEeC-CCCCCCHHHHHHHHHHHHHHHhCC------cEEEeCCchhhhhHHHHHHHHcCCeEEEecCCCch
Confidence 55666651 222334448899999999998876 44444444433 35677888999999999998876
No 137
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=38.41 E-value=3.1e+02 Score=24.91 Aligned_cols=115 Identities=7% Similarity=0.039 Sum_probs=64.6
Q ss_pred EeeeCCeeEeeecCCCCcccccc---cccccc----cchhhHHHHHHHhhcccccCCCceEEEeCCCCeeeeHHHHHHHH
Q psy16164 27 NITLSGVVVHTVDSGSGAVAQLK---SVFATC----CMISGLILFIFQYIQPNVVHYRLLFQIDAVTDITYTYDDILQKS 99 (214)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~pd~~al~~~~~~~~~Ty~el~~~~ 99 (214)
+.+.+|+.++.. ....+....| +..... ..+.+.+......+... ..-+..|+... .....+|.++...+
T Consensus 318 Tt~iSGSTI~~~-~~~LPlkNiPVl~~~~~~~~~~~~~l~~~i~~~l~~~~~~-~~~~~~Alal~-g~~~~~f~~iq~lA 394 (473)
T PF06277_consen 318 TTEISGSTITYT-EDILPLKNIPVLKPSLEEEEESFEELAEAIREALEWFDLE-GEDQPVALALP-GKPNPSFAEIQELA 394 (473)
T ss_pred EEEEeeeeEEec-CCcCccCCCcEEeeccchhhcchHHHHHHHHHHHHhhccc-CCCCcEEEEeC-CCCCCCHHHHHHHH
Confidence 466777777744 3333322221 111111 23444444443333321 12345566554 23478999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHH--cCCEEEecC
Q psy16164 100 LQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASL--LGITVSSIN 145 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~--~G~i~vpl~ 145 (214)
..++..+... ..++..+.+++++..-=+....--.+ .+.-.+++|
T Consensus 395 ~~i~~~~~~~-~~~~~Plivv~e~D~aKvLGq~l~~~l~~~~~licID 441 (473)
T PF06277_consen 395 EAIAEGMAEL-INPDQPLIVVVEQDMAKVLGQTLQALLPKKRPLICID 441 (473)
T ss_pred HHHHHHHHhh-ccCCCCEEEEECchHHHHHHHHHHHhcCCCCCEEEEe
Confidence 9999999975 57777888888887766654433332 234444443
No 138
>PRK08315 AMP-binding domain protein; Validated
Probab=38.21 E-value=2.6e+02 Score=25.04 Aligned_cols=70 Identities=13% Similarity=0.019 Sum_probs=45.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC--CCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSEN--RLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
.+|...+...+..+.. ..++.++|++....|- +..++...++.+..|+..+.......+ .++...+...+
T Consensus 218 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~--~~~~~~l~~~~ 289 (559)
T PRK08315 218 TLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDP--LATLAAVEEER 289 (559)
T ss_pred EeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCH--HHHHHHHHHcC
Confidence 5788877655544333 3488999998877764 334445668888889888744455556 66666665444
No 139
>PF12646 DUF3783: Domain of unknown function (DUF3783); InterPro: IPR016621 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.82 E-value=1e+02 Score=18.96 Aligned_cols=31 Identities=16% Similarity=0.260 Sum_probs=18.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHH
Q psy16164 100 LQLADALQKRGYRRGDIVSICSENRLDYPVLI 131 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~ 131 (214)
.++-..+++.|+ +...-++..|++..|-+..
T Consensus 15 ~~~l~~~r~~~~-~~~~kAvlT~tN~~Wt~~~ 45 (58)
T PF12646_consen 15 DKFLDALRKAGI-PIPLKAVLTPTNINWTLKD 45 (58)
T ss_pred HHHHHHHHHcCC-CcceEEEECCCcccCcHHH
Confidence 334445566666 5666666767666665543
No 140
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=36.76 E-value=77 Score=21.91 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=23.2
Q ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCC
Q psy16164 102 LADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGI 139 (214)
Q Consensus 102 la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 139 (214)
+...+...|+.+++.|.+++.++.....+...+...|.
T Consensus 66 ~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 66 LRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 44445566777777777777765554555555555564
No 141
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.75 E-value=2.8e+02 Score=24.35 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC--cHHHHHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL--DYPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~i~vpl~ 145 (214)
.++.++++ .+.+|. .+|+..+...+...... .++..+|++....+-.- .+...+++++..|+.+++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 34566654 233332 57888887665544333 47889999887776432 3345578889999988875
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
+.+.+ +++...+...+
T Consensus 240 ~~~~~--~~~~~~i~~~~ 255 (513)
T PRK07656 240 PVFDP--DEVFRLIETER 255 (513)
T ss_pred CcCCH--HHHHHHHHHhC
Confidence 45556 77766666444
No 142
>PRK12583 acyl-CoA synthetase; Provisional
Probab=35.51 E-value=3.2e+02 Score=24.34 Aligned_cols=70 Identities=13% Similarity=0.098 Sum_probs=45.4
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC--CCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSEN--RLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
.+|+..+...+..+... .|+.++|++....|- ...++...++++..|+.++.......+ .++...+..-+
T Consensus 220 ~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~--~~~~~~i~~~~ 291 (558)
T PRK12583 220 TLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDP--LATLQAVEEER 291 (558)
T ss_pred EeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCH--HHHHHHHHHcC
Confidence 67888886555544333 478899998776653 234556677888889888844444555 66665555433
No 143
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=34.91 E-value=1.8e+02 Score=22.27 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=37.9
Q ss_pred HHHHHHHhhcccccCCCceEEEeCCCCe--eeeHHH--HHHHHHHHHHHHHHcCCCCCCEEEEEe
Q psy16164 61 LILFIFQYIQPNVVHYRLLFQIDAVTDI--TYTYDD--ILQKSLQLADALQKRGYRRGDIVSICS 121 (214)
Q Consensus 61 ~~~~~~~~~~~~~~~pd~~al~~~~~~~--~~Ty~e--l~~~~~~la~~L~~~Gl~~gd~V~i~~ 121 (214)
.+..+.+.++ .+|+....+.+.++. +-.|.+ =..|+..++.+|.+.|+.++ +|.+.+
T Consensus 101 ~L~~~a~~L~---~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G 161 (190)
T COG2885 101 TLDELAKYLK---KNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVG 161 (190)
T ss_pred HHHHHHHHHH---hCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEE
Confidence 3444545444 578888888776543 223442 24579999999999998888 776654
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.74 E-value=3.3e+02 Score=23.86 Aligned_cols=69 Identities=12% Similarity=-0.058 Sum_probs=47.3
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
.+|+..+...+..... ..|+.++|++....|-.-.+ +...++++..|+..+..+.. ++ ..+...+...+
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~--~~~~~~l~~~~ 255 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DP--ENLLDLIETER 255 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CH--HHHHHHHHHhC
Confidence 5788888876665544 44889999998887744322 33345578889988877664 66 77777776554
No 145
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=33.56 E-value=66 Score=20.71 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=22.9
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHHcCCC
Q psy16164 86 TDITYTYDDILQKSLQLADALQKRGYR 112 (214)
Q Consensus 86 ~~~~~Ty~el~~~~~~la~~L~~~Gl~ 112 (214)
.|+.+|..++.+.++++...+++.|.-
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~ 53 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYI 53 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-T
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCce
Confidence 388999999999999999999998854
No 146
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=33.22 E-value=1.2e+02 Score=20.41 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=21.8
Q ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCC
Q psy16164 102 LADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGI 139 (214)
Q Consensus 102 la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 139 (214)
+...+...|..+++.|.+++.+......+...+...|.
T Consensus 54 ~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 91 (106)
T cd01519 54 FEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGY 91 (106)
T ss_pred HHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCC
Confidence 44445455666667777777766554444455555554
No 147
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=32.48 E-value=1.7e+02 Score=22.48 Aligned_cols=47 Identities=9% Similarity=0.010 Sum_probs=33.5
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHH
Q psy16164 87 DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAA 134 (214)
Q Consensus 87 ~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~ 134 (214)
..-+||.|+...+.++|..+.+. +...+.+.+...+.-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 45689999999999999999874 222234556666777666666664
No 148
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=31.76 E-value=1.3e+02 Score=26.01 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=27.2
Q ss_pred HHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC
Q psy16164 106 LQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 106 L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
+..+++++||.|.+-. +.|.....++...|+.++.++..
T Consensus 63 l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d 101 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIR 101 (376)
T ss_pred HHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecC
Confidence 3445789999988754 44555566677889888777643
No 149
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=31.49 E-value=1.4e+02 Score=21.73 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCCEEEEEeC--CCCcHHHHHHHHHHcCCEEEec
Q psy16164 93 DDILQKSLQLADALQK-RGYRRGDIVSICSE--NRLDYPVLIVAASLLGITVSSI 144 (214)
Q Consensus 93 ~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~--n~~~~~~~~lA~~~~G~i~vpl 144 (214)
..-.+.-..++..+.. ..+++||.+.+++. |++..+-+...+-..|+..+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 82 SNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3333334455555553 46899999988886 6777777888888899887754
No 150
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=31.48 E-value=38 Score=26.88 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=19.8
Q ss_pred CCCCCCEEEEEeCCCCcHHHHHHHHHHc
Q psy16164 110 GYRRGDIVSICSENRLDYPVLIVAASLL 137 (214)
Q Consensus 110 Gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 137 (214)
-.++||.++|+.+|..+.+-.++..+..
T Consensus 41 ~Y~pGD~l~V~P~N~~~~V~~~l~~lgl 68 (219)
T PF00667_consen 41 SYQPGDHLGVYPPNDPEEVERLLKRLGL 68 (219)
T ss_dssp ---TT-EEEEE-SSEHHHHHHHHHHHTS
T ss_pred cccCCCEEEEEccCCHHHHHHHHHHhCC
Confidence 3578999999999999988888887764
No 151
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=30.96 E-value=64 Score=20.03 Aligned_cols=21 Identities=24% Similarity=0.351 Sum_probs=16.4
Q ss_pred HHHHHHcCCCCCCEEEEEeCC
Q psy16164 103 ADALQKRGYRRGDIVSICSEN 123 (214)
Q Consensus 103 a~~L~~~Gl~~gd~V~i~~~n 123 (214)
+.+|.+.|+..|+.|-|-...
T Consensus 30 G~WL~~aGF~~G~~v~V~v~~ 50 (57)
T PF08845_consen 30 GKWLEEAGFTIGDPVKVRVMP 50 (57)
T ss_pred hhhhHHhCCCCCCEEEEEEEC
Confidence 457888899999998776543
No 152
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=30.86 E-value=86 Score=25.90 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=41.4
Q ss_pred eeeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEE
Q psy16164 89 TYTYDDILQ-----KSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITV 141 (214)
Q Consensus 89 ~~Ty~el~~-----~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~ 141 (214)
.+.|.++.+ ....+...|.+.|+.+++.|.++|.+......+++++-.+|.--
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~ 258 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPN 258 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 456777653 24566677778899999999999999988888888888888753
No 153
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=30.84 E-value=89 Score=20.87 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=28.3
Q ss_pred CCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCCc
Q psy16164 75 HYRLLFQIDAVTDITYTYDDILQKSLQLADALQK-RGYRRGDIVSICSENRLD 126 (214)
Q Consensus 75 ~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gl~~gd~V~i~~~n~~~ 126 (214)
..++..++.-.-+..-|-.+=.+.-..++..|.. .|+.+.|...++.+|..+
T Consensus 25 Rs~~~v~I~It~~~gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~e 77 (82)
T PF14552_consen 25 RSDDFVIIQITSGAGRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPRE 77 (82)
T ss_dssp S-TT-EEEEEEECS---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-GG
T ss_pred CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCcc
Confidence 3444444432223344556666666777888875 799999999999887764
No 154
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=30.47 E-value=91 Score=26.43 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=40.1
Q ss_pred eeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEE
Q psy16164 90 YTYDDILQK------SLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVS 142 (214)
Q Consensus 90 ~Ty~el~~~------~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~v 142 (214)
+.|.++.+. ...+...+.+.|+.+++.|.++|.+......+++++-.+|.--+
T Consensus 239 ip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 239 VPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred cCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 556655432 35666777788999999999999998888888888888886533
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=28.00 E-value=3.2e+02 Score=23.34 Aligned_cols=55 Identities=9% Similarity=0.080 Sum_probs=38.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC-cHHHHHHHHHHcCCEEEecCC
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL-DYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~-~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+|+..+...+...... .|++++|++....+-.- ..+...++.+..|+..+..++
T Consensus 130 ~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 185 (436)
T TIGR01923 130 PHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK 185 (436)
T ss_pred EEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch
Confidence 67898888776665544 47899999887766432 222346778889998887643
No 156
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.06 E-value=1.6e+02 Score=19.68 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=41.9
Q ss_pred eeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 89 TYTYDDILQKSLQLAD---ALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~---~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
..||+||......+++ +|.+..+..+|.++|+.-++.. .--++-++...+. +++...+.+.+
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~--eev~~ele~mg 73 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESE--EEVERELEDMG 73 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCH--HHHHHHHHHhC
Confidence 5789999888766654 5666678899999999766542 1233455666666 77766665433
No 157
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=26.02 E-value=2.1e+02 Score=24.60 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC---CchhHHHHHHHhh
Q psy16164 102 LADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ---YTEVVKELSQHCV 160 (214)
Q Consensus 102 la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~---~~~~~~~l~~~l~ 160 (214)
+...+..+++++||.|.+-. +.|.....++...|+.++.++.. +..+.+++...+.
T Consensus 61 l~lal~al~~~~Gd~Viv~~---~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~ 119 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPS---LTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAIT 119 (379)
T ss_pred HHHHHHHcCCCCCCEEEECC---CcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcc
Confidence 33455556789999987764 44555556677789888776542 1111255555554
No 158
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=25.68 E-value=1.4e+02 Score=20.77 Aligned_cols=51 Identities=24% Similarity=0.302 Sum_probs=32.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEE
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVS 142 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~v 142 (214)
.++|.++.+.+..+|..|...+......|++.. --+..+..-+...+....
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~~~ivgi~~---~G~~~a~~la~~l~~~~~ 54 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDFDVIVGIPR---GGIPLAAALARALGIPLV 54 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTSSEEEEETT---TTHHHHHHHHHHHTHEEE
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCCCEEEeehh---ccHHHHHHHHHHhCCCcc
Confidence 468999999999999999988765555333332 223444444444454443
No 159
>PRK10595 SOS cell division inhibitor; Provisional
Probab=23.81 E-value=1.9e+02 Score=22.14 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=35.7
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecC--C-CCch
Q psy16164 103 ADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSIN--P-QYTE 150 (214)
Q Consensus 103 a~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~--~-~~~~ 150 (214)
+.+|...|+..+..+.|-..+..+.+.++--+++.|..-+-+- | ....
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~ 120 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTE 120 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCH
Confidence 4567788999888887877788899999999999986444443 4 4543
No 160
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1 [].
Probab=23.48 E-value=29 Score=22.95 Aligned_cols=35 Identities=37% Similarity=0.514 Sum_probs=24.8
Q ss_pred HHhhhhhhhccccccccccchHHHHHhccchhhhh
Q psy16164 171 EIGALAEETNSLLKKNVFHNYMLFIETAKEISRIL 205 (214)
Q Consensus 171 ~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~l~ 205 (214)
.+..........++..|+.+|.+|+....++..++
T Consensus 30 ~L~~~i~~~~~eLr~~V~~nY~~fI~as~~I~~m~ 64 (87)
T PF08700_consen 30 KLRQEIEEKDEELRKLVYENYRDFIEASDEISSME 64 (87)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333344445788999999999999988776544
No 161
>COG2746 Aminoglycoside N3'-acetyltransferase [Defense mechanisms]
Probab=22.64 E-value=1e+02 Score=25.35 Aligned_cols=43 Identities=23% Similarity=0.261 Sum_probs=29.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEeCCCC---------cHHHHHHH-----HHHcCCEEEe
Q psy16164 101 QLADALQKRGYRRGDIVSICSENRL---------DYPVLIVA-----ASLLGITVSS 143 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~~n~~---------~~~~~~lA-----~~~~G~i~vp 143 (214)
.+...|.++|++.|+.|.+.+.++- ..+-.++. +...|..++|
T Consensus 16 ~l~~~l~~lG~k~G~~v~vHssl~~~g~~~gg~~~vi~~l~~~~~~vV~~egtlimP 72 (251)
T COG2746 16 DLKDDLYKLGLKEGDTVIVHSSLSSFGWVEGGRNTVLQALLDEFKGVVGPEGTLIMP 72 (251)
T ss_pred HHHHHHHHhcCCCCCEEEEehhhhhhccccCchHHHHHHHHHHhhceeccCccEEcc
Confidence 3455677899999999999987553 23334444 3336777777
No 162
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=22.40 E-value=2.4e+02 Score=23.85 Aligned_cols=40 Identities=15% Similarity=0.087 Sum_probs=21.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCCCcHH-HHHHHHHHcCC
Q psy16164 100 LQLADALQKRGYRRGDIVSICSENRLDYP-VLIVAASLLGI 139 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n~~~~~-~~~lA~~~~G~ 139 (214)
..++..|.++|+.+++.|.+++.+...+. -+++.+...|.
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~ 129 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGH 129 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCC
Confidence 34555666667777777777765554332 23344444554
No 163
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=22.27 E-value=2.7e+02 Score=19.19 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=23.5
Q ss_pred HHHHHcCCCCCCEEEEEeCC-CCcHHHHHHHHHHcCC
Q psy16164 104 DALQKRGYRRGDIVSICSEN-RLDYPVLIVAASLLGI 139 (214)
Q Consensus 104 ~~L~~~Gl~~gd~V~i~~~n-~~~~~~~~lA~~~~G~ 139 (214)
..+...|+.++..|.+++.. +.....+...+...|.
T Consensus 69 ~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~ 105 (122)
T cd01448 69 ELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGH 105 (122)
T ss_pred HHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCC
Confidence 33455677888888888877 3555555555666664
No 164
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=22.07 E-value=6.7e+02 Score=23.58 Aligned_cols=68 Identities=12% Similarity=-0.003 Sum_probs=44.0
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC--CcHHHHHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENR--LDYPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~i~vpl~ 145 (214)
.++.++++ .+.+|. .+|...+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 45666654 343443 6888888766654443 34788999988877742 333445678888999887554
No 165
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=21.95 E-value=2.4e+02 Score=23.90 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=44.3
Q ss_pred hhhHHHHHHHhhcccccCCCceEEEeCCC--CeeeeHHHHHHHHHHHHHHHH-Hc-CCCCCCE-EEEEeCCCCcHHH
Q psy16164 58 ISGLILFIFQYIQPNVVHYRLLFQIDAVT--DITYTYDDILQKSLQLADALQ-KR-GYRRGDI-VSICSENRLDYPV 129 (214)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~pd~~al~~~~~--~~~~Ty~el~~~~~~la~~L~-~~-Gl~~gd~-V~i~~~n~~~~~~ 129 (214)
+|+--..+.+..+++.+....+.+++.-+ +-...|.+|+-.+..+-++|. ++ |++.++- |.|.+.|.++.+-
T Consensus 192 VGdgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~LD 268 (368)
T COG1223 192 VGDGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELLD 268 (368)
T ss_pred hhhHHHHHHHHHHHHHhcCCeEEEehhhhhhhhhhhHHHhcccHHHHHHHHHHhccCcccCCceEEEeecCChhhcC
Confidence 34444445555555444333444444322 124569999999988888886 34 8887775 5666778888764
No 166
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=21.75 E-value=3.1e+02 Score=21.27 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=27.3
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHH
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVA 133 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA 133 (214)
-+|+.|+..++.++|..+.+. .+....+.+...+.-..+...++
T Consensus 11 lis~~~I~~~i~~lA~~I~~~-~~~~~~vivgi~~Gg~~fa~~L~ 54 (189)
T PLN02238 11 LWTAEDISARVAELAAQIASD-YAGKSPVVLGVATGAFMFLADLV 54 (189)
T ss_pred EcCHHHHHHHHHHHHHHHHHH-cCCCCcEEEEEccCCHHHHHHHH
Confidence 589999999999999999864 22222333333444444444343
No 167
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=21.64 E-value=1.8e+02 Score=19.57 Aligned_cols=45 Identities=16% Similarity=-0.006 Sum_probs=37.0
Q ss_pred HHHHHH-cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC
Q psy16164 103 ADALQK-RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 103 a~~L~~-~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
+.+|.+ .|++.|+-++.+...-.|.+...=++++++-+-+.....
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~~~~ 48 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELATFFP 48 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEeeeC
Confidence 456664 599999999999999999999999999998887655443
No 168
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=21.54 E-value=3.5e+02 Score=20.20 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=26.1
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHH
Q psy16164 89 TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYP 128 (214)
Q Consensus 89 ~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~ 128 (214)
-+||.++.+.+.++|..+.+.| + -+.|.-.+..+.-+.
T Consensus 9 ~is~~~i~~~i~~la~~I~~~~-~-~d~vvgv~~GG~~fa 46 (156)
T PRK09177 9 PVSWDQLHRDARALAWRLLPAG-Q-WKGIIAVTRGGLVPA 46 (156)
T ss_pred EcCHHHHHHHHHHHHHHHHhhC-C-CCEEEEEecCCeehH
Confidence 5799999999999999998765 3 344444444444333
No 169
>PF04023 FeoA: FeoA domain; InterPro: IPR007167 This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble SH3-domain protein probably located in the cytosol; FeoB, a large protein with a cytosolic N-terminal G-protein domain and a C-terminal integral inner-membrane domain containing two 'Gate' motifs which likely functions as the Fe2+ permease; and FeoC, a small protein apparently functioning as an [Fe-S]-dependent transcriptional repressor [, ]. Feo allows the bacterial cell to acquire iron from its environment. ; GO: 0005506 iron ion binding; PDB: 3HRT_B 3HRS_A 3HRU_B 1G3T_A 1C0W_B 1BI3_A 1QVP_A 1BI1_A 1BYM_A 2QQB_A ....
Probab=21.54 E-value=1.2e+02 Score=19.11 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeC
Q psy16164 100 LQLADALQKRGYRRGDIVSICSE 122 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~ 122 (214)
..+.+.|.++|+.+|..|-+...
T Consensus 22 ~~~~~~L~~lGl~~G~~i~v~~~ 44 (74)
T PF04023_consen 22 PELLRRLADLGLTPGSEITVIRK 44 (74)
T ss_dssp HHHHHHHHHCT-STTEEEEEEEE
T ss_pred HHHHHHHHHCCCCCCCEEEEEEe
Confidence 45667888999999999988853
No 170
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=21.06 E-value=2.8e+02 Score=23.78 Aligned_cols=51 Identities=14% Similarity=0.019 Sum_probs=31.6
Q ss_pred HHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC---CchhHHHHHHHhh
Q psy16164 107 QKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ---YTEVVKELSQHCV 160 (214)
Q Consensus 107 ~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~---~~~~~~~l~~~l~ 160 (214)
...++++||.|.+-.+ .|.....++...|+.++.++.. +..+.+++...+.
T Consensus 64 ~~~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~ 117 (375)
T PRK11706 64 LLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAIT 117 (375)
T ss_pred HHhCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcC
Confidence 3347889999887654 4445556677889987776542 1211266665554
No 171
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=20.93 E-value=6.4e+02 Score=22.94 Aligned_cols=114 Identities=11% Similarity=0.048 Sum_probs=64.2
Q ss_pred EeeeCCeeEeeecCCCCcccccc---ccccc---ccchhhHHHHHHHhhcccccCCCceEEEeCCCCeeeeHHHHHHHHH
Q psy16164 27 NITLSGVVVHTVDSGSGAVAQLK---SVFAT---CCMISGLILFIFQYIQPNVVHYRLLFQIDAVTDITYTYDDILQKSL 100 (214)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~ 100 (214)
+.+.+|+.++... ...+....| +.... ...+.+.+.+....|+... .-+..|+... .....+|.++.+.+.
T Consensus 320 tt~iSGSTI~~~~-~~LPlkNiPVl~~~~~~e~~~~~l~~~i~~~l~~f~~~~-~~~~~alal~-g~~~~~y~~iq~la~ 396 (475)
T PRK10719 320 TTELSGSTIWLEG-VQLPLKNLPVLIPSDDEQEDEEDLVAAIQQALAWFDLDP-ETDAYALALP-GSLPPSYAAIQTLAK 396 (475)
T ss_pred eeEEEeeeEEecC-CccccCCCcEeecccccccchHhHHHHHHHHHHHhhccC-CcCcEEEEcC-CCCCCCHHHHHHHHH
Confidence 4667777777443 333322211 11111 1244444444444443211 2234555543 346889999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcC--CEEEec
Q psy16164 101 QLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLG--ITVSSI 144 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G--~i~vpl 144 (214)
.++.++... ..++..+.+++++..-=+..+.--...+ ...+.+
T Consensus 397 ~i~~~~~~~-~~~~~Pliiv~e~D~aK~LGq~l~~~l~~~~~iicI 441 (475)
T PRK10719 397 ALVDGVARF-PNKPHPLIVVAEQDMGKALGQLLRPQLPKQLPLICI 441 (475)
T ss_pred HHHHHHHhh-ccCCCCEEEEEcccHHHHHHHHHHHhcCCCCCEEEE
Confidence 999999875 4557788888888876665544333333 444444
No 172
>PLN03051 acyl-activating enzyme; Provisional
Probab=20.40 E-value=6e+02 Score=22.45 Aligned_cols=83 Identities=16% Similarity=0.064 Sum_probs=48.2
Q ss_pred CCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC-cHHHHHHHHHHcCCEEEecCCC
Q psy16164 76 YRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL-DYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 76 pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~-~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
++.++++ .+.+|. .+|...+...+... ....++.++|++...+|-+- ..+..+++.+..|+..+.....
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 4566654 333443 57777665443222 23357889998876666332 1233567788899998876544
Q ss_pred CchhHHHHHHHhhcCc
Q psy16164 148 YTEVVKELSQHCVGGL 163 (214)
Q Consensus 148 ~~~~~~~l~~~l~~s~ 163 (214)
+.+ ..+...+.+.+
T Consensus 195 ~~~--~~~~~~i~~~~ 208 (499)
T PLN03051 195 PLG--RGFGKFVQDAG 208 (499)
T ss_pred CCc--HHHHHHHHHhC
Confidence 444 55555555444
No 173
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=20.39 E-value=3e+02 Score=22.59 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=14.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCC
Q psy16164 100 LQLADALQKRGYRRGDIVSICSENR 124 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n~ 124 (214)
..+...+.++|+.+++.|.+++...
T Consensus 73 ~~~~~~~~~~Gi~~d~~VVvyc~~~ 97 (281)
T PRK11493 73 ETFAVAMRELGVNQDKHLVVYDEGN 97 (281)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCC
Confidence 3444555556666666666666543
No 174
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=20.24 E-value=2.8e+02 Score=24.59 Aligned_cols=49 Identities=16% Similarity=0.228 Sum_probs=31.2
Q ss_pred cCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC---CchhHHHHHHHhh
Q psy16164 109 RGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ---YTEVVKELSQHCV 160 (214)
Q Consensus 109 ~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~---~~~~~~~l~~~l~ 160 (214)
.++++||.|.+-. +.|.....++...|+.+++++.. +..+.+.+...+.
T Consensus 106 ~~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~ 157 (438)
T PRK15407 106 RALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVS 157 (438)
T ss_pred cCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcC
Confidence 3789999988774 44555566777889987766543 3222255555553
No 175
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=20.19 E-value=3.9e+02 Score=20.15 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=18.1
Q ss_pred eeHHHHHHHHHHHHHHHHHc
Q psy16164 90 YTYDDILQKSLQLADALQKR 109 (214)
Q Consensus 90 ~Ty~el~~~~~~la~~L~~~ 109 (214)
+||.++.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999864
Done!