Query psy16164
Match_columns 214
No_of_seqs 211 out of 2315
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 22:26:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 99.7 1.8E-16 6E-21 141.3 13.5 90 72-163 32-121 (536)
2 3g7s_A Long-chain-fatty-acid-- 99.7 2.7E-16 9.3E-21 140.5 14.1 105 51-163 14-124 (549)
3 3r44_A Fatty acyl COA syntheta 99.7 3.3E-16 1.1E-20 139.0 14.0 88 74-163 28-115 (517)
4 3ivr_A Putative long-chain-fat 99.7 2.6E-16 8.9E-21 139.2 13.1 86 74-163 18-103 (509)
5 3rix_A Luciferase, luciferin 4 99.7 1.8E-16 6E-21 141.8 11.0 103 53-163 17-122 (550)
6 1t5h_X 4-chlorobenzoyl COA lig 99.7 1.6E-16 5.5E-21 140.5 10.3 88 74-163 14-101 (504)
7 3o83_A Peptide arylation enzym 99.7 6.2E-16 2.1E-20 138.1 12.4 99 55-163 29-127 (544)
8 4gr5_A Non-ribosomal peptide s 99.7 4.2E-16 1.5E-20 139.9 11.4 86 74-163 87-172 (570)
9 4dg8_A PA1221; ANL superfamily 99.7 8.3E-16 2.8E-20 139.6 12.9 86 74-163 39-124 (620)
10 3etc_A AMP-binding protein; ad 99.7 5.5E-16 1.9E-20 139.6 11.6 95 67-163 60-158 (580)
11 1amu_A GRSA, gramicidin synthe 99.6 9.7E-16 3.3E-20 137.5 13.0 86 74-163 51-136 (563)
12 2v7b_A Benzoate-coenzyme A lig 99.6 1.2E-15 3.9E-20 135.7 13.1 90 70-163 31-120 (529)
13 3fce_A D-alanine--poly(phospho 99.6 5.3E-16 1.8E-20 137.4 10.7 86 74-163 13-98 (512)
14 1v25_A Long-chain-fatty-acid-C 99.6 2.4E-15 8.2E-20 134.2 14.0 88 74-163 30-119 (541)
15 3l8c_A D-alanine--poly(phospho 99.6 8.1E-16 2.8E-20 136.4 10.9 86 74-163 16-101 (521)
16 1mdb_A 2,3-dihydroxybenzoate-A 99.6 1.4E-15 4.8E-20 135.6 12.0 86 74-163 37-122 (539)
17 3tsy_A Fusion protein 4-coumar 99.6 1.3E-15 4.4E-20 144.6 12.4 89 73-163 72-160 (979)
18 1pg4_A Acetyl-COA synthetase; 99.6 9.5E-16 3.3E-20 139.8 11.0 96 66-163 79-179 (652)
19 1ry2_A Acetyl-coenzyme A synth 99.6 1.1E-15 3.8E-20 139.7 11.4 88 74-163 94-186 (663)
20 2d1s_A Luciferase, luciferin 4 99.6 2.1E-15 7.2E-20 134.8 11.8 87 74-163 38-124 (548)
21 3rg2_A Enterobactin synthase c 99.6 1.9E-15 6.6E-20 136.9 10.7 89 70-163 34-122 (617)
22 3ite_A SIDN siderophore synthe 99.6 3.3E-15 1.1E-19 133.7 11.8 102 53-163 17-126 (562)
23 3t5a_A Long-chain-fatty-acid-- 99.6 3.9E-15 1.3E-19 130.3 11.2 87 74-163 36-132 (480)
24 4fuq_A Malonyl COA synthetase; 99.6 2.5E-15 8.4E-20 133.0 10.0 88 74-163 12-100 (503)
25 3c5e_A Acyl-coenzyme A synthet 99.6 6.5E-15 2.2E-19 132.3 11.8 87 75-163 56-146 (570)
26 3kxw_A Saframycin MX1 syntheta 99.6 1.3E-14 4.3E-19 130.4 12.0 97 74-170 23-124 (590)
27 3e7w_A D-alanine--poly(phospho 99.6 6.8E-15 2.3E-19 130.3 9.6 86 74-163 13-99 (511)
28 2vsq_A Surfactin synthetase su 99.6 6.8E-15 2.3E-19 143.4 10.4 87 73-163 475-561 (1304)
29 3ipl_A 2-succinylbenzoate--COA 99.6 1.3E-14 4.4E-19 128.0 11.0 83 74-163 13-95 (501)
30 3gqw_A Fatty acid AMP ligase; 99.5 4.2E-14 1.4E-18 126.4 11.2 88 74-163 33-128 (576)
31 3nyq_A Malonyl-COA ligase; A/B 99.4 1E-13 3.5E-18 122.7 4.8 86 69-163 28-115 (505)
32 2y4o_A Phenylacetate-coenzyme 84.5 7.5 0.00026 32.7 10.1 80 81-163 99-184 (443)
33 2y27_A Phenylacetate-coenzyme 83.3 7.7 0.00026 32.6 9.6 85 76-163 89-182 (437)
34 3qov_A Phenylacetate-coenzyme 82.1 9 0.00031 32.1 9.6 82 77-161 86-176 (436)
35 3ipl_A 2-succinylbenzoate--COA 58.2 80 0.0027 26.7 10.2 83 75-163 161-251 (501)
36 4gs5_A Acyl-COA synthetase (AM 50.2 1E+02 0.0034 25.0 10.0 71 76-149 36-114 (358)
37 3hgu_A EHPF; phenazine, antibi 49.5 30 0.001 28.1 5.8 64 82-145 99-168 (369)
38 3o83_A Peptide arylation enzym 49.4 1.3E+02 0.0043 25.9 10.5 81 75-161 189-279 (544)
39 3r44_A Fatty acyl COA syntheta 49.4 1.2E+02 0.004 25.8 9.8 82 75-163 168-258 (517)
40 3ijw_A Aminoglycoside N3-acety 49.1 30 0.001 27.6 5.5 47 100-146 18-74 (268)
41 1mdb_A 2,3-dihydroxybenzoate-A 47.7 1.3E+02 0.0046 25.7 11.1 81 75-161 180-270 (539)
42 3rix_A Luciferase, luciferin 4 38.9 92 0.0031 26.8 7.5 85 76-163 189-281 (550)
43 2d1s_A Luciferase, luciferin 4 38.7 1.7E+02 0.0057 25.1 9.2 83 77-163 192-283 (548)
44 3fce_A D-alanine--poly(phospho 38.6 1.1E+02 0.0037 26.0 7.8 82 75-161 142-233 (512)
45 2nyg_A YOKD protein; PFAM02522 36.3 28 0.00097 27.8 3.4 21 102-122 18-38 (273)
46 3kxw_A Saframycin MX1 syntheta 35.7 1.3E+02 0.0044 25.9 8.0 69 75-146 165-242 (590)
47 1amu_A GRSA, gramicidin synthe 35.1 1.7E+02 0.0056 25.3 8.6 84 75-163 180-273 (563)
48 3sma_A FRBF; N-acetyl transfer 34.9 31 0.0011 27.8 3.4 52 87-145 19-80 (286)
49 3rg2_A Enterobactin synthase c 31.6 2.6E+02 0.0088 24.3 11.0 83 75-163 182-274 (617)
50 4fuq_A Malonyl COA synthetase; 31.0 2.3E+02 0.0079 23.9 8.7 87 75-167 153-248 (503)
51 3g7s_A Long-chain-fatty-acid-- 30.0 2.6E+02 0.0088 23.9 8.9 81 77-163 180-268 (549)
52 1ofu_X SULA, hypothetical prot 28.8 86 0.0029 21.5 4.5 42 103-144 47-88 (119)
53 3e7w_A D-alanine--poly(phospho 27.5 2.8E+02 0.0095 23.3 8.7 81 75-160 141-231 (511)
54 4dg8_A PA1221; ANL superfamily 26.4 3.3E+02 0.011 23.8 9.9 83 75-163 162-253 (620)
55 1t5h_X 4-chlorobenzoyl COA lig 25.4 2.4E+02 0.0084 23.6 7.8 81 75-161 151-242 (504)
56 1oft_A SULA, hypothetical prot 25.4 1.2E+02 0.004 22.1 4.9 42 103-144 89-130 (161)
57 3c5e_A Acyl-coenzyme A synthet 24.3 3.4E+02 0.012 23.3 9.4 84 75-163 204-297 (570)
58 3e19_A FEOA; transcriptional r 23.8 79 0.0027 19.4 3.3 21 101-121 26-46 (77)
59 2ayi_A Aminopeptidase T; metal 23.7 1.9E+02 0.0064 24.4 6.5 49 96-144 5-57 (408)
60 3ivr_A Putative long-chain-fat 22.9 3.4E+02 0.011 22.8 10.2 82 75-163 158-248 (509)
61 2v7b_A Benzoate-coenzyme A lig 22.8 1.6E+02 0.0056 24.9 6.2 84 75-163 181-274 (529)
62 3utn_X Thiosulfate sulfurtrans 22.4 1.3E+02 0.0045 24.4 5.2 27 99-125 98-124 (327)
63 3ju7_A Putative PLP-dependent 22.4 1.4E+02 0.0046 24.3 5.4 52 105-159 69-123 (377)
64 3mhx_A Putative ferrous iron t 22.3 89 0.003 19.6 3.4 22 101-122 26-47 (85)
65 4eez_A Alcohol dehydrogenase 1 21.9 1.9E+02 0.0064 23.0 6.1 59 89-147 136-197 (348)
66 3t5a_A Long-chain-fatty-acid-- 21.7 3.4E+02 0.012 22.3 8.4 84 75-163 181-282 (480)
67 3nyq_A Malonyl-COA ligase; A/B 21.7 3.6E+02 0.012 22.7 11.7 79 75-159 153-240 (505)
68 2l66_A SSO7C4, transcriptional 21.4 1.2E+02 0.0041 17.2 3.5 19 106-124 21-39 (53)
69 1v25_A Long-chain-fatty-acid-C 21.2 3.8E+02 0.013 22.7 8.3 86 75-163 174-267 (541)
70 2k5l_A FEOA; structure, NESG, 21.0 88 0.003 19.5 3.1 22 101-122 23-44 (81)
71 2h3j_A Hypothetical protein PA 20.2 88 0.003 18.9 3.0 22 101-122 22-43 (75)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=99.69 E-value=1.8e-16 Score=141.33 Aligned_cols=90 Identities=23% Similarity=0.344 Sum_probs=85.5
Q ss_pred cccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 72 NVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 72 ~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
+..+||++|++++.+++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|++++|+||.++.
T Consensus 32 a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~- 110 (536)
T 3ni2_A 32 LSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTP- 110 (536)
T ss_dssp GGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCH-
T ss_pred hhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCH-
Confidence 3359999999997667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 111 -~~l~~~l~~~~ 121 (536)
T 3ni2_A 111 -AELAKHAKASR 121 (536)
T ss_dssp -HHHHHHHHHHT
T ss_pred -HHHHHHHHhcC
Confidence 99999999776
No 2
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=99.69 E-value=2.7e-16 Score=140.48 Aligned_cols=105 Identities=22% Similarity=0.275 Sum_probs=92.0
Q ss_pred ccccccchhhHHHHHHHhhcccccCCCceEEEeCCCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC
Q psy16164 51 VFATCCMISGLILFIFQYIQPNVVHYRLLFQIDAVTD------ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENR 124 (214)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~pd~~al~~~~~~------~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~ 124 (214)
...+..++.+++....+ .+||++|+++.+.+ +++||+||.++++++|.+|++.|+++||+|+++++|+
T Consensus 14 ~~~~~~~l~~~l~~~a~------~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~ 87 (549)
T 3g7s_A 14 LYYPKISLADRIDAAAE------KFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNS 87 (549)
T ss_dssp CCCCCCCTTHHHHHHHH------HHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSS
T ss_pred CCcCCCCHHHHHHHHHH------hCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC
Confidence 34455677776544432 58999999987421 7899999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 125 LDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 125 ~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
++|+++++||+++|+++||+||.++. +++.+++++++
T Consensus 88 ~~~~~~~lA~~~~G~~~vpl~~~~~~--~~l~~il~~~~ 124 (549)
T 3g7s_A 88 IDYVMTIYALWRVAATPVPINPMYKS--FELEHILNDSE 124 (549)
T ss_dssp HHHHHHHHHHHHTTCEEEECCTTCCH--HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCEEEccCCCCCH--HHHHHHHHhcC
Confidence 99999999999999999999999999 99999999877
No 3
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=99.68 E-value=3.3e-16 Score=139.05 Aligned_cols=88 Identities=26% Similarity=0.323 Sum_probs=83.5
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+|+++|+++...+.++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||+||.++. +
T Consensus 28 ~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 105 (517)
T 3r44_A 28 VSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAA--P 105 (517)
T ss_dssp HSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCH--H
T ss_pred hCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCcccCH--H
Confidence 59999999997445599999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 106 ~l~~~l~~~~ 115 (517)
T 3r44_A 106 EVSFILSDSG 115 (517)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 4
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=99.68 E-value=2.6e-16 Score=139.24 Aligned_cols=86 Identities=24% Similarity=0.266 Sum_probs=83.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.+++.++|.+|++.|+++||+|+++++|+++|+++++||+++|++++|++|.++. +
T Consensus 18 ~~pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~--~ 93 (509)
T 3ivr_A 18 LFPDRTAFMVD--GVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAILLPVNYRLNA--D 93 (509)
T ss_dssp HSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTSCH--H
T ss_pred HCCCceEEEEC--CcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCH--H
Confidence 59999999996 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 94 ~l~~~l~~~~ 103 (509)
T 3ivr_A 94 EIAFVLGDGA 103 (509)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 5
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=99.67 E-value=1.8e-16 Score=141.75 Aligned_cols=103 Identities=22% Similarity=0.328 Sum_probs=88.6
Q ss_pred ccccchhhHHHHHHHhhcccccCCCceEEE---eCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH
Q psy16164 53 ATCCMISGLILFIFQYIQPNVVHYRLLFQI---DAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV 129 (214)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~pd~~al~---~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~ 129 (214)
.+..++++++....+ .+|+++|++ +...++++||+||.++++++|.+|++.|+++||+|+++++|+++|++
T Consensus 17 ~~~~tl~~~l~~~a~------~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~ 90 (550)
T 3rix_A 17 LEDGTAGEQLHKAMK------RYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFM 90 (550)
T ss_dssp CCCSCHHHHHHHHHH------HHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHH
T ss_pred cccCCHHHHHHHHHH------hCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHH
Confidence 344567766544433 466776654 65557899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 130 LIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 130 ~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
+++||+++|++++|+|+.++. +++.+++++++
T Consensus 91 ~~lA~~~~Gav~vpl~~~~~~--~~l~~~l~~~~ 122 (550)
T 3rix_A 91 PVLGALFIGVAVAPANDIYNE--RELLNSMNISQ 122 (550)
T ss_dssp HHHHHHHHTCEEEECCTTCCH--HHHHHHHHHHC
T ss_pred HHHHHHHcCCEEeecCCcCCH--HHHHHHHHhcC
Confidence 999999999999999999999 99999999766
No 6
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=99.67 E-value=1.6e-16 Score=140.51 Aligned_cols=88 Identities=19% Similarity=0.203 Sum_probs=84.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++...++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|++++|+||.++. +
T Consensus 14 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 91 (504)
T 1t5h_X 14 RAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKS--A 91 (504)
T ss_dssp HCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEEECTTSCH--H
T ss_pred hCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCccCh--H
Confidence 59999999986557899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 92 ~l~~~l~~~~ 101 (504)
T 1t5h_X 92 ELAELIKRGE 101 (504)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHhhcC
Confidence 9999999776
No 7
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=99.65 E-value=6.2e-16 Score=138.12 Aligned_cols=99 Identities=18% Similarity=0.151 Sum_probs=89.3
Q ss_pred ccchhhHHHHHHHhhcccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHH
Q psy16164 55 CCMISGLILFIFQYIQPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAA 134 (214)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~ 134 (214)
+.++.+++....+ .+||++|++++ ++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||
T Consensus 29 ~~tl~~~l~~~a~------~~p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~ 100 (544)
T 3o83_A 29 DQPLTRILTVGVQ------SHPHSLAIICG--ERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFAL 100 (544)
T ss_dssp CCCTTHHHHHHHH------HCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH------hCCCceEEEcC--CCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3456665444332 59999999996 889999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 135 SLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 135 ~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
+++|++++|+++.++. +++.+++++++
T Consensus 101 ~~~Gav~vpl~~~~~~--~~l~~~l~~~~ 127 (544)
T 3o83_A 101 LKAGVVVLNALYSHRQ--YELNAFIKQIQ 127 (544)
T ss_dssp HHHTCEEEECCTTCCH--HHHHHHHHHHC
T ss_pred HHhCcEEecCCCCCCH--HHHHHHHHhcC
Confidence 9999999999999999 99999999766
No 8
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=99.65 E-value=4.2e-16 Score=139.89 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=83.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||+||.++. +
T Consensus 87 ~~pd~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~--~ 162 (570)
T 4gr5_A 87 RAPDAVALLHE--ADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGYTMLDPQFPV--E 162 (570)
T ss_dssp HCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCH--H
T ss_pred HCCCCeEEECC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEEEEcCCCChH--H
Confidence 59999999996 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 163 ~l~~~l~~~~ 172 (570)
T 4gr5_A 163 RLALSLEDTG 172 (570)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 9
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=99.65 E-value=8.3e-16 Score=139.59 Aligned_cols=86 Identities=17% Similarity=0.077 Sum_probs=83.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||+||.++. +
T Consensus 39 ~~Pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~vpld~~~p~--~ 114 (620)
T 4dg8_A 39 LHPHREAIRDR--FGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPA--A 114 (620)
T ss_dssp HCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEEEECCTTSCH--H
T ss_pred hCCCCeEEEcC--CCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeCccChH--H
Confidence 59999999996 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 115 ~l~~il~~~~ 124 (620)
T 4dg8_A 115 WNAELCRQVD 124 (620)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhCC
Confidence 9999999776
No 10
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=99.65 E-value=5.5e-16 Score=139.63 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=84.8
Q ss_pred Hhhcccc-cCCCceEEEeCC---CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEE
Q psy16164 67 QYIQPNV-VHYRLLFQIDAV---TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVS 142 (214)
Q Consensus 67 ~~~~~~~-~~pd~~al~~~~---~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~v 142 (214)
+.+++.+ .+||++|+++.+ .++++||+||.++++++|.+|+++|+++||+|+++++|+++|+++++||+++|++++
T Consensus 60 ~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~~Gav~v 139 (580)
T 3etc_A 60 DVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLHKLGAIAV 139 (580)
T ss_dssp HTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhCCEEEE
Confidence 3344333 499999998632 246899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCchhHHHHHHHhhcCc
Q psy16164 143 SINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 143 pl~~~~~~~~~~l~~~l~~s~ 163 (214)
|+++.++. +++.+++++++
T Consensus 140 pl~~~~~~--~~l~~~l~~~~ 158 (580)
T 3etc_A 140 PATHMLKT--RDIVYRIEKAG 158 (580)
T ss_dssp ECCTTCCH--HHHHHHHHHHT
T ss_pred eCCccCCH--HHHHHHHHhcC
Confidence 99999999 99999999766
No 11
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=99.65 E-value=9.7e-16 Score=137.53 Aligned_cols=86 Identities=19% Similarity=0.200 Sum_probs=82.8
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.+++.++|.+|.+.|+++||+|+++++|+++|+++++||+++|+++||+|+.++. +
T Consensus 51 ~~p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~--~ 126 (563)
T 1amu_A 51 KRPNNVAIVCE--NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPK--E 126 (563)
T ss_dssp HCTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCH--H
T ss_pred HCCCCeEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEeCCCCcH--H
Confidence 59999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 127 ~l~~il~~~~ 136 (563)
T 1amu_A 127 RIQYILDDSQ 136 (563)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 12
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=99.65 E-value=1.2e-15 Score=135.70 Aligned_cols=90 Identities=17% Similarity=0.174 Sum_probs=83.9
Q ss_pred cccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 70 QPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 70 ~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
+..+.+||++|+++. ++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||+|+.++
T Consensus 31 ~~~~~~p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~ 108 (529)
T 2v7b_A 31 RLNETRAGKTAYIDD--TGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLT 108 (529)
T ss_dssp HHTGGGTTSEEEECS--SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEECCTTCC
T ss_pred HhhhccCCceEEEeC--CCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEecCcccC
Confidence 333338999999986 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++++++
T Consensus 109 ~--~~l~~~l~~~~ 120 (529)
T 2v7b_A 109 P--ADYVYMLTHSH 120 (529)
T ss_dssp H--HHHHHHHHHHT
T ss_pred H--HHHHHHHhccC
Confidence 9 99999999766
No 13
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=99.64 E-value=5.3e-16 Score=137.36 Aligned_cols=86 Identities=8% Similarity=0.001 Sum_probs=83.1
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.++++++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|+|+.++. +
T Consensus 13 ~~p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vpl~~~~~~--~ 88 (512)
T 3fce_A 13 ETPDQTAFVWR--DAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIPVDLSIPA--D 88 (512)
T ss_dssp HSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEEEETTSCH--H
T ss_pred HCCCceEEEeC--CceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeCCCCcH--H
Confidence 59999999996 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 89 ~l~~il~~~~ 98 (512)
T 3fce_A 89 RVQRIAENSG 98 (512)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 14
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=99.64 E-value=2.4e-15 Score=134.20 Aligned_cols=88 Identities=19% Similarity=0.159 Sum_probs=82.2
Q ss_pred cCCCceEEEeC--CCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchh
Q psy16164 74 VHYRLLFQIDA--VTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEV 151 (214)
Q Consensus 74 ~~pd~~al~~~--~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~ 151 (214)
.+||++|+++. ..++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||+||.++.
T Consensus 30 ~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~- 108 (541)
T 1v25_A 30 LFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSP- 108 (541)
T ss_dssp HSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCH-
T ss_pred hCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEEecCcccCH-
Confidence 59999999852 135789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc
Q psy16164 152 VKELSQHCVGGL 163 (214)
Q Consensus 152 ~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 109 -~~l~~~l~~~~ 119 (541)
T 1v25_A 109 -KEIAYILNHAE 119 (541)
T ss_dssp -HHHHHHHHHHT
T ss_pred -HHHHHHHHhCC
Confidence 99999999766
No 15
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=99.64 E-value=8.1e-16 Score=136.36 Aligned_cols=86 Identities=10% Similarity=0.001 Sum_probs=83.2
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+.+. ++++||+||.++++++|.+|.+.|+++||+|+++++|+++|+++++||+++|++++|+|+.++. +
T Consensus 16 ~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~--~ 91 (521)
T 3l8c_A 16 TQADFPVYDCL--GERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYIPVDVHSAP--E 91 (521)
T ss_dssp HSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCEEEEETTSCH--H
T ss_pred HCCCCcceecC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccccH--H
Confidence 59999999986 8899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 92 ~l~~il~~~~ 101 (521)
T 3l8c_A 92 RILAIIEIAK 101 (521)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHhCC
Confidence 9999999777
No 16
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=99.63 E-value=1.4e-15 Score=135.63 Aligned_cols=86 Identities=19% Similarity=0.163 Sum_probs=83.0
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||++|.++. +
T Consensus 37 ~~p~~~A~~~~--~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~--~ 112 (539)
T 1mdb_A 37 KYGDRIAITCG--NTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRS--S 112 (539)
T ss_dssp HHTTSEEEEET--TEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECCTTCCH--H
T ss_pred HCCCCEEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEEecCCCCCCH--H
Confidence 58999999986 7899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 113 ~l~~~l~~~~ 122 (539)
T 1mdb_A 113 EITYFCEFAE 122 (539)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhCC
Confidence 9999999777
No 17
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.63 E-value=1.3e-15 Score=144.64 Aligned_cols=89 Identities=26% Similarity=0.334 Sum_probs=85.1
Q ss_pred ccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 73 VVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 73 ~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
..+||++|+++..+++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|+++||+||.+++
T Consensus 72 ~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~-- 149 (979)
T 3tsy_A 72 SEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTP-- 149 (979)
T ss_dssp GGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCH--
T ss_pred HhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCH--
Confidence 359999999997667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 150 ~~l~~~l~~~~ 160 (979)
T 3tsy_A 150 AEIAKQAKASN 160 (979)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 99999999776
No 18
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=99.63 E-value=9.5e-16 Score=139.84 Aligned_cols=96 Identities=15% Similarity=0.190 Sum_probs=85.6
Q ss_pred HHhhcccc-cCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCE
Q psy16164 66 FQYIQPNV-VHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGIT 140 (214)
Q Consensus 66 ~~~~~~~~-~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i 140 (214)
.+.+++.+ .+||++|+++.. +++++||+||.+++.++|++|+++|+++||+|+++++|+++++++++||+++|++
T Consensus 79 ~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav 158 (652)
T 1pg4_A 79 ANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAV 158 (652)
T ss_dssp HHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCcE
Confidence 34444443 489999999732 2468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCchhHHHHHHHhhcCc
Q psy16164 141 VSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 141 ~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
++|+++.+++ +++.+++.+++
T Consensus 159 ~vpl~~~~~~--~~l~~~l~~~~ 179 (652)
T 1pg4_A 159 HSVIFGGFSP--EAVAGCIIDSS 179 (652)
T ss_dssp EEECCTTSCH--HHHHHHHHHHT
T ss_pred EEecCCCCCH--HHHHHHHHhcC
Confidence 9999999999 99999999776
No 19
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=99.63 E-value=1.1e-15 Score=139.71 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=82.3
Q ss_pred cCCCceEEEeCC----CCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCC
Q psy16164 74 VHYRLLFQIDAV----TDITYTYDDILQKSLQLADALQ-KRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQY 148 (214)
Q Consensus 74 ~~pd~~al~~~~----~~~~~Ty~el~~~~~~la~~L~-~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~ 148 (214)
.+||++|+++.. +++++||+||.+++.++|+.|+ ++|+++||+|+++++|+++++++++||+++|++++|+++.+
T Consensus 94 ~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~~~ 173 (663)
T 1ry2_A 94 KTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGF 173 (663)
T ss_dssp TCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTS
T ss_pred cCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCCCC
Confidence 489999999732 3578999999999999999999 99999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHhhcCc
Q psy16164 149 TEVVKELSQHCVGGL 163 (214)
Q Consensus 149 ~~~~~~l~~~l~~s~ 163 (214)
+. +++.+++++++
T Consensus 174 ~~--~~l~~~l~~~~ 186 (663)
T 1ry2_A 174 SS--NSLRDRINDGD 186 (663)
T ss_dssp CH--HHHHHHHHHHT
T ss_pred CH--HHHHHHHHhcC
Confidence 99 99999999766
No 20
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=99.62 E-value=2.1e-15 Score=134.83 Aligned_cols=87 Identities=29% Similarity=0.405 Sum_probs=82.4
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+ |++|+++..+++++||+||.++++++|..|++.|+++||+|+++++|+++|+++++||+++|++++|+|+.++. +
T Consensus 38 ~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~--~ 114 (548)
T 2d1s_A 38 KL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTL--R 114 (548)
T ss_dssp HH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCH--H
T ss_pred cc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCH--H
Confidence 47 99999985457899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 115 ~l~~~l~~~~ 124 (548)
T 2d1s_A 115 ELVHSLGISK 124 (548)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999999766
No 21
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=99.61 E-value=1.9e-15 Score=136.86 Aligned_cols=89 Identities=17% Similarity=0.153 Sum_probs=83.5
Q ss_pred cccccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc
Q psy16164 70 QPNVVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT 149 (214)
Q Consensus 70 ~~~~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~ 149 (214)
++.+. ||++|++++ ++++||+||.++++++|.+|++.|+++||+|+++++|+++++++++||+++|+++||+++.++
T Consensus 34 ~~~a~-pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~~vpl~~~~~ 110 (617)
T 3rg2_A 34 TRHAA-SDSIAVIDG--ERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQ 110 (617)
T ss_dssp HTTTT-CCSEEEEET--TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEECTTCC
T ss_pred HHhhC-CCCeEEecC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeEEccCCcccc
Confidence 44444 999999996 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCc
Q psy16164 150 EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ~~~~~l~~~l~~s~ 163 (214)
. +++.+++++++
T Consensus 111 ~--~~l~~~l~~~~ 122 (617)
T 3rg2_A 111 R--SELNAYASQIE 122 (617)
T ss_dssp H--HHHHHHHHHHC
T ss_pred H--HHHHHHHhhcC
Confidence 9 99999998766
No 22
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=99.61 E-value=3.3e-15 Score=133.65 Aligned_cols=102 Identities=16% Similarity=0.063 Sum_probs=87.2
Q ss_pred ccccchhhHHHHHHHhhcccccCCCceEEEeCCC--------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC
Q psy16164 53 ATCCMISGLILFIFQYIQPNVVHYRLLFQIDAVT--------DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENR 124 (214)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~pd~~al~~~~~--------~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~ 124 (214)
.+..++.+++.... ..+||++|+++... ++++||+||.++++++|+.|.+.|+ +||+|+++++|+
T Consensus 17 ~~~~tl~~~l~~~a------~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~ 89 (562)
T 3ite_A 17 TSTVPPSHYIETWA------KTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRS 89 (562)
T ss_dssp -CCCCTTHHHHHHH------HHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSC
T ss_pred cccCCHHHHHHHHH------HHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCC
Confidence 34455555543332 25999999987521 2689999999999999999999999 799999999999
Q ss_pred CcHHHHHHHHHHcCCEEEecCCCCchhHHHHHHHhhcCc
Q psy16164 125 LDYPVLIVAASLLGITVSSINPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 125 ~~~~~~~lA~~~~G~i~vpl~~~~~~~~~~l~~~l~~s~ 163 (214)
++|+++++||+++|+++||+|+.++. +++.+++++++
T Consensus 90 ~~~~~~~lA~~~~Gav~vpl~~~~~~--~~l~~~l~~~~ 126 (562)
T 3ite_A 90 LIAFAIIVGIMKSGNTYVPIEAGLPN--DRKSFLLRDSR 126 (562)
T ss_dssp HHHHHHHHHHHHTTCEEEECCTTSCH--HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCEEEecCCcCHH--HHHHHHHHhcC
Confidence 99999999999999999999999999 99999999766
No 23
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=99.60 E-value=3.9e-15 Score=130.34 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=79.9
Q ss_pred cCCCceEEEeCC-----CC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 74 VHYRLLFQIDAV-----TD--ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 74 ~~pd~~al~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
.+||++|+++.+ ++ +++||+||.++++++|.+|++.|+ +||+|+++++|+++|+++++||+++|+++||+|+
T Consensus 36 ~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~ 114 (480)
T 3t5a_A 36 LQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFLGALQAGRIAVPLSV 114 (480)
T ss_dssp HSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECS
T ss_pred hCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEeeCC
Confidence 599999998753 22 689999999999999999999996 9999999999999999999999999999999999
Q ss_pred ---CCchhHHHHHHHhhcCc
Q psy16164 147 ---QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ---~~~~~~~~l~~~l~~s~ 163 (214)
.++. +++.+++++++
T Consensus 115 ~~~~~~~--~~l~~il~~~~ 132 (480)
T 3t5a_A 115 PQGGVTD--ERSDSVLSDSS 132 (480)
T ss_dssp CCSCTTC--CHHHHHHHHHC
T ss_pred CCccchH--HHHHHHHHhCC
Confidence 7788 99999999766
No 24
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=99.60 E-value=2.5e-15 Score=133.00 Aligned_cols=88 Identities=20% Similarity=0.202 Sum_probs=80.4
Q ss_pred cCCCceEEEe-CCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQID-AVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~-~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+|+++++.. ..+++++||+||.++++++|.+|++.|+++||+|+++++|+++|+++++||+++|++++|+|+.++.
T Consensus 12 ~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~~~-- 89 (503)
T 4fuq_A 12 KLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNTAYTL-- 89 (503)
T ss_dssp CCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTCCH--
T ss_pred hCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEecCCCCCH--
Confidence 4777777653 1247899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 90 ~~l~~il~~~~ 100 (503)
T 4fuq_A 90 HELDYFITDAE 100 (503)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999999766
No 25
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=99.59 E-value=6.5e-15 Score=132.33 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=81.4
Q ss_pred CCCceEEEeCC---CCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch
Q psy16164 75 HYRLLFQIDAV---TDITYTYDDILQKSLQLADALQKR-GYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE 150 (214)
Q Consensus 75 ~pd~~al~~~~---~~~~~Ty~el~~~~~~la~~L~~~-Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~ 150 (214)
+||++|+++.+ .++++||+||.++++++|.+|++. |+++||+|+++++|+++|+++++||+++|+++||+|+.++.
T Consensus 56 ~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga~~vpl~~~~~~ 135 (570)
T 3c5e_A 56 RPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKS 135 (570)
T ss_dssp SCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEECCTTCCH
T ss_pred CCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCCCCCH
Confidence 89999998742 236899999999999999999998 99999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCc
Q psy16164 151 VVKELSQHCVGGL 163 (214)
Q Consensus 151 ~~~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 136 --~~l~~~l~~~~ 146 (570)
T 3c5e_A 136 --TDILYRLQMSK 146 (570)
T ss_dssp --HHHHHHHHHHT
T ss_pred --HHHHHHHHhcC
Confidence 99999999766
No 26
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=99.57 E-value=1.3e-14 Score=130.37 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=82.9
Q ss_pred cCCCceEEEeCC--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCch-
Q psy16164 74 VHYRLLFQIDAV--TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTE- 150 (214)
Q Consensus 74 ~~pd~~al~~~~--~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~- 150 (214)
.+||++|+++.+ .++++||+||.+++.++|.+|++.|+++||+|+++++|+++|+++++||+++|++++|++|.++.
T Consensus 23 ~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~ 102 (590)
T 3kxw_A 23 HSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIYPPAQEK 102 (590)
T ss_dssp HCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECCCCSHH
T ss_pred hCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCcEEEEecCCCchH
Confidence 599999998642 25799999999999999999999999999999999999999999999999999999999998843
Q ss_pred hHHHHHHHhhcCc--eeecchH
Q psy16164 151 VVKELSQHCVGGL--ELQQKRV 170 (214)
Q Consensus 151 ~~~~l~~~l~~s~--~~~~~~~ 170 (214)
..+++.+++.+++ ++.....
T Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~ 124 (590)
T 3kxw_A 103 LLDKAQRIVTNSKPVIVLMIAD 124 (590)
T ss_dssp HHHHHHHHHHHHCCSEEEECHH
T ss_pred HHHHHHHHHHhCCCCEEEeCHH
Confidence 1277888888655 4444333
No 27
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=99.56 E-value=6.8e-15 Score=130.25 Aligned_cols=86 Identities=12% Similarity=0.071 Sum_probs=81.7
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKR-GYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
.+||++|+++. ++++||+||.++++++|.+|.+. |.++|++|+++++|+++|+++++||+++|++++|+|+.++.
T Consensus 13 ~~p~~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~-- 88 (511)
T 3e7w_A 13 TYPQTDAFRSQ--GQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPVDLSIPS-- 88 (511)
T ss_dssp HSTTSEEEEET--TEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEEETTSCH--
T ss_pred HCCCCeEEEcC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEEecCCCChH--
Confidence 59999999986 78999999999999999999874 88899999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 89 ~~l~~~l~~~~ 99 (511)
T 3e7w_A 89 ERIAKIIESSG 99 (511)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhCC
Confidence 99999999766
No 28
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.56 E-value=6.8e-15 Score=143.37 Aligned_cols=87 Identities=17% Similarity=0.260 Sum_probs=83.5
Q ss_pred ccCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhH
Q psy16164 73 VVHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVV 152 (214)
Q Consensus 73 ~~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~ 152 (214)
..+||++|+++. ++++||+||.++++++|..|++.|+++|++|+|+++|+++++++++||+++|+++||++|.++.
T Consensus 475 ~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~-- 550 (1304)
T 2vsq_A 475 NANPDAPALTYS--GQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPE-- 550 (1304)
T ss_dssp HHCTTSEEEESS--SCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCH--
T ss_pred HhCCCCeEEEEC--CeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHH--
Confidence 359999999986 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCc
Q psy16164 153 KELSQHCVGGL 163 (214)
Q Consensus 153 ~~l~~~l~~s~ 163 (214)
+++.+++++++
T Consensus 551 ~rl~~il~~~~ 561 (1304)
T 2vsq_A 551 DRISYMLADSA 561 (1304)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 99999999776
No 29
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.56 E-value=1.3e-14 Score=128.04 Aligned_cols=83 Identities=22% Similarity=0.263 Sum_probs=79.3
Q ss_pred cCCCceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCchhHH
Q psy16164 74 VHYRLLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYTEVVK 153 (214)
Q Consensus 74 ~~pd~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~~~~~ 153 (214)
.+||++|+++. ++++||+||.+++.++|.+|++. +||+|+++++|+++|+++++||+++|++++|+|+.++. +
T Consensus 13 ~~pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~--~ 85 (501)
T 3ipl_A 13 QNGHHIAITDG--QESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTP--N 85 (501)
T ss_dssp HHTTSEEEECS--SCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCH--H
T ss_pred hcCCceEEEeC--CcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCccCCH--H
Confidence 58999999986 78999999999999999999986 89999999999999999999999999999999999999 9
Q ss_pred HHHHHhhcCc
Q psy16164 154 ELSQHCVGGL 163 (214)
Q Consensus 154 ~l~~~l~~s~ 163 (214)
++.+++++++
T Consensus 86 ~l~~~l~~~~ 95 (501)
T 3ipl_A 86 EMTNQMRSID 95 (501)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999999776
No 30
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=99.52 E-value=4.2e-14 Score=126.44 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=79.5
Q ss_pred cCCCceEEEeCC-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCCCc---
Q psy16164 74 VHYRLLFQIDAV-TDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQYT--- 149 (214)
Q Consensus 74 ~~pd~~al~~~~-~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~~~--- 149 (214)
.+|+.+++.+.. .++++||+||.+++.++|.+|++.|+++||+|+++++|+++|+++++||+++|++++|+++.++
T Consensus 33 ~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~ 112 (576)
T 3gqw_A 33 SSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYAGLVAVPLAIPMGVGQ 112 (576)
T ss_dssp SSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEECCCSSSSS
T ss_pred CCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCeEeecCCCCcccc
Confidence 588887775532 2468999999999999999999999999999999999999999999999999999999999998
Q ss_pred ----hhHHHHHHHhhcCc
Q psy16164 150 ----EVVKELSQHCVGGL 163 (214)
Q Consensus 150 ----~~~~~l~~~l~~s~ 163 (214)
. +++.+++.+++
T Consensus 113 ~~~~~--~~l~~~l~~~~ 128 (576)
T 3gqw_A 113 RDSWS--AKLQGLLASCQ 128 (576)
T ss_dssp HHHHH--HHHHHHHHHHC
T ss_pred hhhHH--HHHHHHHHhcC
Confidence 6 88999998665
No 31
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=99.41 E-value=1e-13 Score=122.69 Aligned_cols=86 Identities=19% Similarity=0.206 Sum_probs=75.0
Q ss_pred hcccc-cCCC-ceEEEeCCCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCC
Q psy16164 69 IQPNV-VHYR-LLFQIDAVTDITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 69 ~~~~~-~~pd-~~al~~~~~~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~ 146 (214)
+...+ .+|+ ++|++++ ++++||+||.+++.++|.+|. .|++|+++++|+++|+++++||+++|+++||+||
T Consensus 28 l~~~a~~~p~d~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga~~vpl~~ 100 (505)
T 3nyq_A 28 LSPAPTGAPADRPALRFG--ERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGVAAVPLNP 100 (505)
T ss_dssp TSSCCCSGGGGSEEEEET--TEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHhCCCCCeEEEEC--CeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCCEEEEcCC
Confidence 34444 4676 9999996 789999999999999998774 3889999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
.++. +++.+++++++
T Consensus 101 ~~~~--~~l~~il~~~~ 115 (505)
T 3nyq_A 101 KSGD--KELAHILSDSA 115 (505)
T ss_dssp TCCH--HHHHHHHHHHC
T ss_pred CCCH--HHHHHHHHHCC
Confidence 9999 99999999766
No 32
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=84.47 E-value=7.5 Score=32.71 Aligned_cols=80 Identities=20% Similarity=0.071 Sum_probs=58.0
Q ss_pred EEeCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC--cHHHHHHHHHHcCCEEEecCCCCchhHHH
Q psy16164 81 QIDAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL--DYPVLIVAASLLGITVSSINPQYTEVVKE 154 (214)
Q Consensus 81 l~~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~i~vpl~~~~~~~~~~ 154 (214)
+..+.+|. .+|.+.+...+..++..+...|+.++|++....+-+. ..+...++++..|+..++.... .+ ++
T Consensus 99 ~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~--~~ 175 (443)
T 2y4o_A 99 ASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QT--EK 175 (443)
T ss_dssp EECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CH--HH
T ss_pred ECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CH--HH
Confidence 34555554 5799999888887888777889999999998888643 2344567888899999987765 44 66
Q ss_pred HHHHhhcCc
Q psy16164 155 LSQHCVGGL 163 (214)
Q Consensus 155 l~~~l~~s~ 163 (214)
+...+.+.+
T Consensus 176 ~~~~i~~~~ 184 (443)
T 2y4o_A 176 QVQLIRDFE 184 (443)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 666665433
No 33
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=83.27 E-value=7.7 Score=32.59 Aligned_cols=85 Identities=21% Similarity=0.108 Sum_probs=59.5
Q ss_pred CCceEE---EeCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC--cHHHHHHHHHHcCCEEEecCC
Q psy16164 76 YRLLFQ---IDAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL--DYPVLIVAASLLGITVSSINP 146 (214)
Q Consensus 76 pd~~al---~~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~i~vpl~~ 146 (214)
++.++. ..+.+|. .+|.+.+...+..++..+...|+.++|++....+-.. ..+...++++..|+..++...
T Consensus 89 ~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 168 (437)
T 2y27_A 89 QDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGG 168 (437)
T ss_dssp GGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCS
T ss_pred hhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCC
Confidence 445553 3444453 5799999888877777777789999999998887543 224456788899999998766
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
. .+ +.+...+.+.+
T Consensus 169 ~-~~--~~~~~~i~~~~ 182 (437)
T 2y27_A 169 G-QT--EKQVQLIQDFR 182 (437)
T ss_dssp C-CH--HHHHHHHHHHC
T ss_pred C-CH--HHHHHHHHHhC
Confidence 4 45 66666665433
No 34
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=82.10 E-value=9 Score=32.15 Aligned_cols=82 Identities=17% Similarity=0.070 Sum_probs=59.3
Q ss_pred CceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCC--cHHHHHHHHHHcCCEEEecCCC
Q psy16164 77 RLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRL--DYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 77 d~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
+.++++ .+.+|. .+|.+.+...+..++..+...|+.++|++....+-+. ..+...++++..|+..++..+.
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~ 165 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG 165 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC
Confidence 556644 344443 5899999888888888888889999999999887543 3344667888999999987655
Q ss_pred CchhHHHHHHHhhc
Q psy16164 148 YTEVVKELSQHCVG 161 (214)
Q Consensus 148 ~~~~~~~l~~~l~~ 161 (214)
.+ +.+...+..
T Consensus 166 -~~--~~~~~~i~~ 176 (436)
T 3qov_A 166 -NS--KRQIKFISD 176 (436)
T ss_dssp -CH--HHHHHHHHH
T ss_pred -CH--HHHHHHHHH
Confidence 34 555555553
No 35
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=58.24 E-value=80 Score=26.68 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=56.2
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINP 146 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~ 146 (214)
.++.+|++ .+.+|. .+|.+.+...+..... ..|+.++|++...+|-.-.+ +...++.+..|+..+....
T Consensus 161 ~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 237 (501)
T 3ipl_A 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDK 237 (501)
T ss_dssp CTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSS
T ss_pred CCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCCC
Confidence 56777765 344443 6899888777665443 35899999998888864332 2346778889999887754
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
+.+ +.+...+...+
T Consensus 238 -~~~--~~~~~~i~~~~ 251 (501)
T 3ipl_A 238 -FNA--EQILTMIKNER 251 (501)
T ss_dssp -CCH--HHHHHHHHHSC
T ss_pred -CCH--HHHHHHHHHcC
Confidence 556 77776676544
No 36
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=50.17 E-value=1e+02 Score=24.98 Aligned_cols=71 Identities=13% Similarity=0.060 Sum_probs=46.4
Q ss_pred CCceEE---EeCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCCC
Q psy16164 76 YRLLFQ---IDAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 76 pd~~al---~~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~~ 147 (214)
+|.+|+ ..+.+|. .+|.+.+...+...+.. .++.++|++...+|-+-.+ +...+..+..|+..+...+.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~ 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKA---LSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPT 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHH---hCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcc
Confidence 355554 4666664 68999888776655443 4899999998888755332 33445566678777766665
Q ss_pred Cc
Q psy16164 148 YT 149 (214)
Q Consensus 148 ~~ 149 (214)
..
T Consensus 113 ~~ 114 (358)
T 4gs5_A 113 AN 114 (358)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 37
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=49.48 E-value=30 Score=28.10 Aligned_cols=64 Identities=16% Similarity=-0.119 Sum_probs=43.7
Q ss_pred EeCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCc--HHHHHHHHHHcCCEEEecC
Q psy16164 82 IDAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLD--YPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 82 ~~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~i~vpl~ 145 (214)
..+.+|. .+|.+.+...+...+..+...|+.++|++..++|-+.. -+...++++..|+++++..
T Consensus 99 TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~ 168 (369)
T 3hgu_A 99 SGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID 168 (369)
T ss_dssp ECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC
T ss_pred CCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc
Confidence 3454553 57888888888777677777899999999999886333 2334455588999766643
No 38
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=49.44 E-value=1.3e+02 Score=25.88 Aligned_cols=81 Identities=9% Similarity=-0.117 Sum_probs=54.3
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH---HHHHHHHcCCEEEec
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV---LIVAASLLGITVSSI 144 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~---~~lA~~~~G~i~vpl 144 (214)
.++.+|++ .+.+|. .+|.+.+...+...+.. .|+.++|++...+|-+..+-. .+++.+..|+..+..
T Consensus 189 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 265 (544)
T 3o83_A 189 PADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMA 265 (544)
T ss_dssp CTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEEC
Confidence 45677765 333443 68999888777655443 489999999999887665544 367888899998876
Q ss_pred CCCCchhHHHHHHHhhc
Q psy16164 145 NPQYTEVVKELSQHCVG 161 (214)
Q Consensus 145 ~~~~~~~~~~l~~~l~~ 161 (214)
.. +.+ ..+...+..
T Consensus 266 ~~-~~~--~~~~~~i~~ 279 (544)
T 3o83_A 266 PN-PEP--LNCFSIIQR 279 (544)
T ss_dssp SS-CCH--HHHHHHHHH
T ss_pred CC-CCH--HHHHHHHHH
Confidence 54 445 555555543
No 39
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=49.42 E-value=1.2e+02 Score=25.85 Aligned_cols=82 Identities=16% Similarity=0.043 Sum_probs=51.8
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH--HHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV--LIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~--~~lA~~~~G~i~vpl~ 145 (214)
.|+.++++ .+.+|. .+|.+.+...+...+.. .++.++|++...+|-.-.+-. .+++.+ .|+..+...
T Consensus 168 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~ 243 (517)
T 3r44_A 168 GGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMP 243 (517)
T ss_dssp CTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECS
T ss_pred CCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeC
Confidence 35666654 444443 68999887776655444 489999999988886654433 244555 888888764
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
.+.+ ..+...+...+
T Consensus 244 -~~~~--~~~~~~i~~~~ 258 (517)
T 3r44_A 244 -QFDA--TKVWSLIVEER 258 (517)
T ss_dssp -SCCH--HHHHHHHHHTT
T ss_pred -CCCH--HHHHHHHHHhC
Confidence 4556 66666665444
No 40
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=49.12 E-value=30 Score=27.56 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCC-C-------c-HHHHHHHHHH-cCCEEEecCC
Q psy16164 100 LQLADALQKRGYRRGDIVSICSENR-L-------D-YPVLIVAASL-LGITVSSINP 146 (214)
Q Consensus 100 ~~la~~L~~~Gl~~gd~V~i~~~n~-~-------~-~~~~~lA~~~-~G~i~vpl~~ 146 (214)
..+...|+++|+++||.|.+.+.-+ . + .+-+++.++. -|.+++|-.+
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 3456778889999999999998632 1 2 2224444444 4777777643
No 41
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=47.68 E-value=1.3e+02 Score=25.68 Aligned_cols=81 Identities=10% Similarity=0.005 Sum_probs=54.5
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH---HHHHHHHcCCEEEec
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV---LIVAASLLGITVSSI 144 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~---~~lA~~~~G~i~vpl 144 (214)
.|+.+|++ .+.+|. .+|.+.+...+...... .|+.++|++...+|-+-.+-. .+++.+..|+..+..
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 180 KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEV---CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHh---hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 45677754 344443 68998887776554443 478999999888886654433 478888899998876
Q ss_pred CCCCchhHHHHHHHhhc
Q psy16164 145 NPQYTEVVKELSQHCVG 161 (214)
Q Consensus 145 ~~~~~~~~~~l~~~l~~ 161 (214)
.. +.+ .++...+..
T Consensus 257 ~~-~~~--~~~~~~i~~ 270 (539)
T 1mdb_A 257 PS-PSP--DDAFPLIER 270 (539)
T ss_dssp SS-SSH--HHHHHHHHH
T ss_pred CC-CCH--HHHHHHHHH
Confidence 44 555 666655553
No 42
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=38.91 E-value=92 Score=26.76 Aligned_cols=85 Identities=7% Similarity=-0.006 Sum_probs=52.2
Q ss_pred CCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCCC
Q psy16164 76 YRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 76 pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~~ 147 (214)
++.+|++ .+.+|. .+|.+.+...+......+...++.++|++...+|-.-.+ +...++.+..|+..+....
T Consensus 189 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~- 267 (550)
T 3rix_A 189 DKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYR- 267 (550)
T ss_dssp TTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSS-
T ss_pred CCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeCC-
Confidence 3556654 333443 688888776655444333335788999998888865432 3455677889999887754
Q ss_pred CchhHHHHHHHhhcCc
Q psy16164 148 YTEVVKELSQHCVGGL 163 (214)
Q Consensus 148 ~~~~~~~l~~~l~~s~ 163 (214)
+.+ +.+...+...+
T Consensus 268 ~~~--~~~~~~i~~~~ 281 (550)
T 3rix_A 268 FEE--ELFLRSLQDYK 281 (550)
T ss_dssp CCH--HHHHHHHHHTT
T ss_pred CCH--HHHHHHHHHcC
Confidence 555 66666665444
No 43
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=38.65 E-value=1.7e+02 Score=25.13 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=54.4
Q ss_pred CceEEEe---CCCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHH--HHHHHHHHcCCEEEecCCC
Q psy16164 77 RLLFQID---AVTD----ITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYP--VLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 77 d~~al~~---~~~~----~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~--~~~lA~~~~G~i~vpl~~~ 147 (214)
+.++++. +.+| -.+|.+.+...+......+...++.++|++...+|-+-.+- ..+++.+ .|+..+... .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 7777653 3333 36899988776655444333357889999988887654433 2356667 999988765 4
Q ss_pred CchhHHHHHHHhhcCc
Q psy16164 148 YTEVVKELSQHCVGGL 163 (214)
Q Consensus 148 ~~~~~~~l~~~l~~s~ 163 (214)
+.+ +.+...+...+
T Consensus 270 ~~~--~~~~~~i~~~~ 283 (548)
T 2d1s_A 270 FDE--ETFLKTLQDYK 283 (548)
T ss_dssp CCH--HHHHHHHHHTT
T ss_pred CCH--HHHHHHHHHcC
Confidence 566 77776666544
No 44
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=38.63 E-value=1.1e+02 Score=25.97 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=51.8
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINP 146 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~ 146 (214)
.++.++++ .+.+|. .+|.+.+...+..... ..++.++|++...+|-+-.+ +...++.+..|+..+....
T Consensus 142 ~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 218 (512)
T 3fce_A 142 KGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDK 218 (512)
T ss_dssp CTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCH
Confidence 45666754 344443 5899888776654443 35889999999998865432 3457788889999887765
Q ss_pred C--CchhHHHHHHHhhc
Q psy16164 147 Q--YTEVVKELSQHCVG 161 (214)
Q Consensus 147 ~--~~~~~~~l~~~l~~ 161 (214)
. ..+ ..+...+..
T Consensus 219 ~~~~~~--~~~~~~i~~ 233 (512)
T 3fce_A 219 DMIARP--KDLFASLEQ 233 (512)
T ss_dssp HHHHSH--HHHHHHHHH
T ss_pred HHhhCH--HHHHHHHHH
Confidence 3 233 555555543
No 45
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=36.33 E-value=28 Score=27.77 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=18.2
Q ss_pred HHHHHHHcCCCCCCEEEEEeC
Q psy16164 102 LADALQKRGYRRGDIVSICSE 122 (214)
Q Consensus 102 la~~L~~~Gl~~gd~V~i~~~ 122 (214)
+...|+++|+++||.|.+.+.
T Consensus 18 L~~~L~~LGI~~Gd~llVHsS 38 (273)
T 2nyg_A 18 ITEDLKALGLKKGMTVLVHSS 38 (273)
T ss_dssp HHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHcCCCCCCEEEEEec
Confidence 566788899999999999985
No 46
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=35.66 E-value=1.3e+02 Score=25.92 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=49.0
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH--HHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV--LIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~--~~lA~~~~G~i~vpl~ 145 (214)
.|+.++++ .+.+|. .+|.+.+...+..... ..++.++|++...+|-+-.+-. .+++.+..|+..+...
T Consensus 165 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 241 (590)
T 3kxw_A 165 KSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMS 241 (590)
T ss_dssp CTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECC
T ss_pred CCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeC
Confidence 46677765 343443 6899988877766544 3588999999998887655433 3678888999888765
Q ss_pred C
Q psy16164 146 P 146 (214)
Q Consensus 146 ~ 146 (214)
+
T Consensus 242 ~ 242 (590)
T 3kxw_A 242 P 242 (590)
T ss_dssp H
T ss_pred H
Confidence 4
No 47
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=35.10 E-value=1.7e+02 Score=25.33 Aligned_cols=84 Identities=12% Similarity=-0.022 Sum_probs=48.8
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINP 146 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~ 146 (214)
.++.+|++ .+.+|. .+|.+.+...+.... ...|+.++|++..++|-+-.. +..++..+..|+..+....
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 256 (563)
T 1amu_A 180 KSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFE---NSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILK 256 (563)
T ss_dssp CTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHH---HTSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHH---HhcCCCCCCEEEEeCCccHHHHHHHHHHHHHCCCEEEEcCh
Confidence 35566654 444443 588888765544332 335899999998888765433 3346677888998876544
Q ss_pred C--CchhHHHHHHHhhcCc
Q psy16164 147 Q--YTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~--~~~~~~~l~~~l~~s~ 163 (214)
. ..+ ..+...+...+
T Consensus 257 ~~~~~~--~~~~~~i~~~~ 273 (563)
T 1amu_A 257 DTINDF--VKFEQYINQKE 273 (563)
T ss_dssp HHHTCH--HHHHHHHHHTT
T ss_pred HhhcCH--HHHHHHHHHcC
Confidence 2 233 55555554333
No 48
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=34.89 E-value=31 Score=27.79 Aligned_cols=52 Identities=21% Similarity=0.165 Sum_probs=34.1
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC-Cc--------HHHHHHHHHH-cCCEEEecC
Q psy16164 87 DITYTYDDILQKSLQLADALQKRGYRRGDIVSICSENR-LD--------YPVLIVAASL-LGITVSSIN 145 (214)
Q Consensus 87 ~~~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~-~~--------~~~~~lA~~~-~G~i~vpl~ 145 (214)
+..+|-.+| ...|+++|+++||.|.+.+.-+ .- .+-+++.++. -|.+++|-.
T Consensus 19 ~~~~T~~~L-------~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~ 80 (286)
T 3sma_A 19 RELVTRDRL-------ASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTF 80 (286)
T ss_dssp CCEECHHHH-------HHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCcCHHHH-------HHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEecc
Confidence 556777765 4567889999999999998733 22 2223333332 577888873
No 49
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=31.63 E-value=2.6e+02 Score=24.33 Aligned_cols=83 Identities=10% Similarity=-0.063 Sum_probs=54.7
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH---HHHHHHHcCCEEEec
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV---LIVAASLLGITVSSI 144 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~---~~lA~~~~G~i~vpl 144 (214)
.++.+|++ .+.+|. .+|.+.+...+...... .++.++|++...+|-+..+-. ..++++..|+..+..
T Consensus 182 ~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~ 258 (617)
T 3rg2_A 182 PADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLA 258 (617)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEe
Confidence 45677754 344443 68998887776655444 478999999999886655443 367888889988876
Q ss_pred CCCCchhHHHHHHHhhcCc
Q psy16164 145 NPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 145 ~~~~~~~~~~l~~~l~~s~ 163 (214)
... .. ..+...+...+
T Consensus 259 ~~~-~~--~~~~~~i~~~~ 274 (617)
T 3rg2_A 259 ADP-SA--TLCFPLIEKHQ 274 (617)
T ss_dssp SSC-CH--HHHHHHHHHTT
T ss_pred CCC-CH--HHHHHHHHHhC
Confidence 553 34 55544454433
No 50
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=30.98 E-value=2.3e+02 Score=23.86 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=54.4
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCc--HHHHHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLD--YPVLIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~i~vpl~ 145 (214)
.++.+|++ .+.+|. .+|.+.+...+..+... .++.++|++...+|-.-. +....+..+..|+..+...
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~ 229 (503)
T 4fuq_A 153 GADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDY---WRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLP 229 (503)
T ss_dssp CTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECS
T ss_pred CCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHH---hCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcC
Confidence 45677754 343443 68999887776655443 478999999888775322 2334556677888877654
Q ss_pred CCCchhHHHHHHHhhcCceeec
Q psy16164 146 PQYTEVVKELSQHCVGGLELQQ 167 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~~~~~ 167 (214)
.+.+ +.+...+.....+..
T Consensus 230 -~~~~--~~~~~~i~~~t~~~~ 248 (503)
T 4fuq_A 230 -KFDP--DKILDLMARATVLMG 248 (503)
T ss_dssp -SCCH--HHHHHHHTTCCEEEE
T ss_pred -CCCH--HHHHHHHhhcCEEEE
Confidence 5566 676666664444433
No 51
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=30.04 E-value=2.6e+02 Score=23.85 Aligned_cols=81 Identities=17% Similarity=0.105 Sum_probs=54.5
Q ss_pred CceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCCCC
Q psy16164 77 RLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINPQY 148 (214)
Q Consensus 77 d~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~~~ 148 (214)
+.+|++ .+.+|. .+|.+.+...+..++.. .|+.++|++...+|-.-.+ +...+.++..|+..+... .+
T Consensus 180 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~ 255 (549)
T 3g7s_A 180 EDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVA---TGLSHMDTIVGCMPMFHSAEFGLVNLMVTVGNEYVVMG-MF 255 (549)
T ss_dssp TSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHH---HCCCTTCEEECCSCTTSHHHHHHHTTHHHHCCEEEEES-SC
T ss_pred CCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHH---cCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCceEEEcC-CC
Confidence 666753 455553 68999988877766554 4789999998888765433 233667778899888775 45
Q ss_pred chhHHHHHHHhhcCc
Q psy16164 149 TEVVKELSQHCVGGL 163 (214)
Q Consensus 149 ~~~~~~l~~~l~~s~ 163 (214)
.+ ..+...+...+
T Consensus 256 ~~--~~~~~~i~~~~ 268 (549)
T 3g7s_A 256 NQ--EMLAENIEKYK 268 (549)
T ss_dssp CH--HHHHHHHHHTT
T ss_pred CH--HHHHHHHHHhC
Confidence 55 66666665444
No 52
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=28.84 E-value=86 Score=21.46 Aligned_cols=42 Identities=19% Similarity=0.248 Sum_probs=34.9
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEec
Q psy16164 103 ADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSI 144 (214)
Q Consensus 103 a~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl 144 (214)
+.+|...|+.++..+.+-..+..+.+.++-=+++.|...+-+
T Consensus 47 ~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl 88 (119)
T 1ofu_X 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVV 88 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEE
Confidence 457778899999888888888889999999999998865544
No 53
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=27.49 E-value=2.8e+02 Score=23.35 Aligned_cols=81 Identities=12% Similarity=0.017 Sum_probs=52.7
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecCC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSINP 146 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~~ 146 (214)
.++.++++ .+.+|. .+|.+.+...+..+.. ..++.++|++...+|-+-.+ +...++++..|+..+....
T Consensus 141 ~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 217 (511)
T 3e7w_A 141 KEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTK 217 (511)
T ss_dssp CTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCH
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcCh
Confidence 45566654 444543 6899888776655443 35789999999988865443 3457788899999887654
Q ss_pred C--CchhHHHHHHHhh
Q psy16164 147 Q--YTEVVKELSQHCV 160 (214)
Q Consensus 147 ~--~~~~~~~l~~~l~ 160 (214)
. ..+ ..+...+.
T Consensus 218 ~~~~~~--~~~~~~i~ 231 (511)
T 3e7w_A 218 DAVNKP--KVLFEELK 231 (511)
T ss_dssp HHHHSH--HHHHHHHH
T ss_pred hhhcCH--HHHHHHHH
Confidence 2 233 44444444
No 54
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=26.35 E-value=3.3e+02 Score=23.84 Aligned_cols=83 Identities=16% Similarity=-0.046 Sum_probs=53.8
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH-HHHHHHHHHcCCEEEecC-
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY-PVLIVAASLLGITVSSIN- 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~i~vpl~- 145 (214)
.|+.+|++ .+.+|. .+|.+.+...+. .....++.++|++...+|-+-.. +..+++.+..|+..+...
T Consensus 162 ~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~----~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 237 (620)
T 4dg8_A 162 AADQIAYINFSSGTTGRPKAIACTHAGITRLCL----GQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDL 237 (620)
T ss_dssp CTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHS----SCGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCS
T ss_pred CCCCeEEEEECCCccccCeEEEEchHHHHHHHH----HHHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCcc
Confidence 35677754 455554 688887754332 12345889999999998866543 345678888999887653
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
..+.+ ..+...+...+
T Consensus 238 ~~~~~--~~~~~~i~~~~ 253 (620)
T 4dg8_A 238 GPLDP--GVLRQLIGERG 253 (620)
T ss_dssp SSCCH--HHHHHHHHTTC
T ss_pred ccCCH--HHHHHHHHHhC
Confidence 24555 67766666544
No 55
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=25.42 E-value=2.4e+02 Score=23.64 Aligned_cols=81 Identities=15% Similarity=0.026 Sum_probs=51.1
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCC--CCCCEEEEEeCCCCcHH--HHHHHHHHcCCEEEe
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGY--RRGDIVSICSENRLDYP--VLIVAASLLGITVSS 143 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl--~~gd~V~i~~~n~~~~~--~~~lA~~~~G~i~vp 143 (214)
.|+.+|++ .+.+|. .+|.+.+...+..+.. ..|+ .++|++...+|-.-.+- ..+++.+..|+..+.
T Consensus 151 ~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 227 (504)
T 1t5h_X 151 EPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMST---QVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVV 227 (504)
T ss_dssp CTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHH---TTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEE
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHH---hhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEe
Confidence 46677754 333443 5788887766554433 3467 78898888877654443 346788889999987
Q ss_pred cCCCCchhHHHHHHHhhc
Q psy16164 144 INPQYTEVVKELSQHCVG 161 (214)
Q Consensus 144 l~~~~~~~~~~l~~~l~~ 161 (214)
... +.+ .++...+..
T Consensus 228 ~~~-~~~--~~~~~~i~~ 242 (504)
T 1t5h_X 228 VEE-FRP--VDALQLVQQ 242 (504)
T ss_dssp CSS-CCH--HHHHHHHHH
T ss_pred CCC-CCH--HHHHHHHHH
Confidence 654 555 666655553
No 56
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=25.39 E-value=1.2e+02 Score=22.14 Aligned_cols=42 Identities=19% Similarity=0.248 Sum_probs=35.6
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEec
Q psy16164 103 ADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSI 144 (214)
Q Consensus 103 a~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl 144 (214)
+.+|...|+.+...+.|-..+..+.+.++--+++.|...+-+
T Consensus 89 ~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~aVl 130 (161)
T 1oft_A 89 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVV 130 (161)
T ss_dssp HHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCccEEE
Confidence 567788899999888888889999999999999999865544
No 57
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=24.26 E-value=3.4e+02 Score=23.31 Aligned_cols=84 Identities=11% Similarity=0.047 Sum_probs=51.8
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH--HHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV--LIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~--~~lA~~~~G~i~vpl~ 145 (214)
.++.+|++ .+.+|. .+|.+ +....... .....|+.++|++...+|-+-.+-. .+++.+..|+..+...
T Consensus 204 ~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 280 (570)
T 3c5e_A 204 GSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKM--DAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHL 280 (570)
T ss_dssp BTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHH--HTTTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEEC
T ss_pred CCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhh--hhhhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEec
Confidence 45677754 344443 57888 43311111 1144688999999888876654433 4577788898887765
Q ss_pred C-CCchhHHHHHHHhhcCc
Q psy16164 146 P-QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~-~~~~~~~~l~~~l~~s~ 163 (214)
. .+.+ ..+...+...+
T Consensus 281 ~~~~~~--~~~~~~i~~~~ 297 (570)
T 3c5e_A 281 LPKFDP--LVILKTLSSYP 297 (570)
T ss_dssp CSSCCH--HHHHHHHHHSC
T ss_pred CCCCCH--HHHHHHHHHhC
Confidence 3 5666 77766666444
No 58
>3e19_A FEOA; transcriptional regulator, metal-binding, iron uptake, beta- transcription regulator, metal binding protein; HET: GOL; 2.00A {Thermococcus thioreducens}
Probab=23.81 E-value=79 Score=19.40 Aligned_cols=21 Identities=14% Similarity=0.265 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEe
Q psy16164 101 QLADALQKRGYRRGDIVSICS 121 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~ 121 (214)
.+.+.|.++|+.+|..|-+..
T Consensus 26 ~~~~rL~~lGi~~G~~v~v~~ 46 (77)
T 3e19_A 26 NARQKLVSMGLTPGATIQVLE 46 (77)
T ss_dssp HHHHHHHTTTCSTTCEEEEEE
T ss_pred HHHHHHHHCCCCCCCEEEEEE
Confidence 567788999999999998874
No 59
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=23.75 E-value=1.9e+02 Score=24.37 Aligned_cols=49 Identities=14% Similarity=0.052 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHH--cCCCCCCEEEEEeCCCCcHH--HHHHHHHHcCCEEEec
Q psy16164 96 LQKSLQLADALQK--RGYRRGDIVSICSENRLDYP--VLIVAASLLGITVSSI 144 (214)
Q Consensus 96 ~~~~~~la~~L~~--~Gl~~gd~V~i~~~n~~~~~--~~~lA~~~~G~i~vpl 144 (214)
..+..++|..+.+ .++++|+.|.|..+-...-+ .+.-++..+|+-.+.+
T Consensus 5 ~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v 57 (408)
T 2ayi_A 5 KRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTV 57 (408)
T ss_dssp HHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEE
Confidence 4566677777765 47999999999998554333 4677888899987754
No 60
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=22.95 E-value=3.4e+02 Score=22.75 Aligned_cols=82 Identities=13% Similarity=0.010 Sum_probs=48.5
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHH-HHHHH-HHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYP-VLIVA-ASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~-~~~lA-~~~~G~i~vpl~ 145 (214)
.++.++++ .+.+|. .+|.+.+...+..... ..++.++|++...+|-.-.+- ...+. .+..|+.+++.
T Consensus 158 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~~- 233 (509)
T 3ivr_A 158 GAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVD---AWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIAA- 233 (509)
T ss_dssp CTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---hhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEec-
Confidence 45566643 555554 6899888777665544 348999999998888654332 22333 44455555443
Q ss_pred CCCchhHHHHHHHhhcCc
Q psy16164 146 PQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 146 ~~~~~~~~~l~~~l~~s~ 163 (214)
.+.+ .++...+...+
T Consensus 234 -~~~~--~~~~~~i~~~~ 248 (509)
T 3ivr_A 234 -KFDP--AQAARDIEAHK 248 (509)
T ss_dssp -SCCH--HHHHHHHHHHT
T ss_pred -ccCH--HHHHHHHHHHC
Confidence 5556 66666665433
No 61
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=22.81 E-value=1.6e+02 Score=24.92 Aligned_cols=84 Identities=14% Similarity=0.038 Sum_probs=51.2
Q ss_pred CCCceEEE---eCCCCe----eeeHHHH-HHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH--HHHHHHHcCCEEEec
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDI-LQKSLQLADALQKRGYRRGDIVSICSENRLDYPV--LIVAASLLGITVSSI 144 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el-~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~--~~lA~~~~G~i~vpl 144 (214)
.|+.++++ .+.+|. .+|.+.+ ...... .....|+.++|++...+|-.-.+-. .++..+..|+..+..
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~---~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 257 (529)
T 2v7b_A 181 GCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELY---AKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILM 257 (529)
T ss_dssp CTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHT---CCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECC
T ss_pred CCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHH---hhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEe
Confidence 45677754 333443 5788877 322211 1112478899999888887655433 346778899999877
Q ss_pred CCCCchhHHHHHHHhhcCc
Q psy16164 145 NPQYTEVVKELSQHCVGGL 163 (214)
Q Consensus 145 ~~~~~~~~~~l~~~l~~s~ 163 (214)
.+.+.+ ..+...+...+
T Consensus 258 ~~~~~~--~~~~~~i~~~~ 274 (529)
T 2v7b_A 258 AERPTA--DAIFARLVEHR 274 (529)
T ss_dssp CSCCCH--HHHHHHHHHSC
T ss_pred cCCCCH--HHHHHHHHHhC
Confidence 666666 77766666444
No 62
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=22.40 E-value=1.3e+02 Score=24.39 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=21.8
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCCC
Q psy16164 99 SLQLADALQKRGYRRGDIVSICSENRL 125 (214)
Q Consensus 99 ~~~la~~L~~~Gl~~gd~V~i~~~n~~ 125 (214)
..+++..|.++|+.+++.|.++-....
T Consensus 98 ~~~f~~~l~~lGI~~d~~VVvYD~~~~ 124 (327)
T 3utn_X 98 KKVFDDAMSNLGVQKDDILVVYDRVGN 124 (327)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECSSSS
T ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCCC
Confidence 467888888899999999988876554
No 63
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=22.39 E-value=1.4e+02 Score=24.34 Aligned_cols=52 Identities=17% Similarity=0.050 Sum_probs=31.4
Q ss_pred HHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC---CchhHHHHHHHh
Q psy16164 105 ALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ---YTEVVKELSQHC 159 (214)
Q Consensus 105 ~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~---~~~~~~~l~~~l 159 (214)
.+...++++||.|.+-.+..+.+ ..++...|+.++.++.. +..+.+++...+
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i 123 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPAT---PLAAIWCGLEPYFIDISIDDWYMDKTVLWDKI 123 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHH
T ss_pred HHHHcCCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCccCCcCHHHHHHHH
Confidence 34445789999998886655544 34566788876655432 222226666555
No 64
>3mhx_A Putative ferrous iron transport protein A; FEOA, zinc binding, prokaryotic SH3 stenotrophomonus maltophilia, metal transport; 1.70A {Stenotrophomonas maltophilia}
Probab=22.33 E-value=89 Score=19.65 Aligned_cols=22 Identities=23% Similarity=0.540 Sum_probs=18.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEeC
Q psy16164 101 QLADALQKRGYRRGDIVSICSE 122 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~~ 122 (214)
.+.+.|.++|+.+|..|-+...
T Consensus 26 ~~~~rL~~lGl~pG~~v~V~~~ 47 (85)
T 3mhx_A 26 AIARRLRELGFVKGEEVRMVAK 47 (85)
T ss_dssp HHHHHHHHTTCCTTCEEEEEES
T ss_pred HHHHHHHHCCCCCCCEEEEEEe
Confidence 4667888999999999988754
No 65
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=21.85 E-value=1.9e+02 Score=22.98 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=35.9
Q ss_pred eeeHHHHHHHHHHH---HHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCEEEecCCC
Q psy16164 89 TYTYDDILQKSLQL---ADALQKRGYRRGDIVSICSENRLDYPVLIVAASLLGITVSSINPQ 147 (214)
Q Consensus 89 ~~Ty~el~~~~~~l---a~~L~~~Gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~i~vpl~~~ 147 (214)
.+++.+-....... -..+...++++|++|.|....+.-...+.++....|+-++.++.+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~ 197 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN 197 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc
Confidence 45666643332222 234455689999999999876655555666655556665555443
No 66
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=21.71 E-value=3.4e+02 Score=22.34 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=53.9
Q ss_pred CCCceEEEe---CCCC----eeeeHHHHHHHHHHHHHHHHHcCCCC------CCEEEEEeCCCCc--HHHHHHHHHHcCC
Q psy16164 75 HYRLLFQID---AVTD----ITYTYDDILQKSLQLADALQKRGYRR------GDIVSICSENRLD--YPVLIVAASLLGI 139 (214)
Q Consensus 75 ~pd~~al~~---~~~~----~~~Ty~el~~~~~~la~~L~~~Gl~~------gd~V~i~~~n~~~--~~~~~lA~~~~G~ 139 (214)
.++.+|++. +.+| ..+|.+.+...+......+ ++.. +|++...+|-.-. +...+++.+..|+
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~ 257 (480)
T 3t5a_A 181 EYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGY---FADTDGIPPPNSALVSWLPFYHDMGLVIGICAPILGGY 257 (480)
T ss_dssp SCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHH---CTTTTTCCCTTEEEEECCCTTSTTHHHHHTHHHHHHTC
T ss_pred CCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHh---ccccccCCCCCCeEEEeCCCcCccHHHHHHHHHHHcCC
Confidence 456777653 3333 3689999988777666554 4444 8888888886543 3456788888999
Q ss_pred EEEecCCC---CchhHHHHHHHhhcCc
Q psy16164 140 TVSSINPQ---YTEVVKELSQHCVGGL 163 (214)
Q Consensus 140 i~vpl~~~---~~~~~~~l~~~l~~s~ 163 (214)
..+...+. ..+ ..+...+...+
T Consensus 258 ~~v~~~~~~~~~~~--~~~~~~i~~~~ 282 (480)
T 3t5a_A 258 PAVLTSPVSFLQRP--ARWMHLMASDF 282 (480)
T ss_dssp CEEECCHHHHHHCT--HHHHHHTTSSS
T ss_pred ceEEECHHHHHHCH--HHHHHHHHhhc
Confidence 88876553 244 66666665444
No 67
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=21.68 E-value=3.6e+02 Score=22.65 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=53.3
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcH--HHHHHHHHHcCCEEEecC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDY--PVLIVAASLLGITVSSIN 145 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~--~~~~lA~~~~G~i~vpl~ 145 (214)
.++.+|++ .+.+|. .+|.+.+...+..+...+ ++.++|++...+|-.-.+ +..+++.+..|+..+...
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (505)
T 3nyq_A 153 DDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG 229 (505)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS
T ss_pred CCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC
Confidence 45666654 454553 689999888877665554 788999998887765433 234688889999988764
Q ss_pred CCCchhHHHHHHHh
Q psy16164 146 PQYTEVVKELSQHC 159 (214)
Q Consensus 146 ~~~~~~~~~l~~~l 159 (214)
. +.+ ......+
T Consensus 230 ~-~~~--~~~~~~i 240 (505)
T 3nyq_A 230 R-FST--EGAAREL 240 (505)
T ss_dssp S-CCH--HHHHHHH
T ss_pred C-CCh--HHHHHHH
Confidence 4 444 5555455
No 68
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=21.44 E-value=1.2e+02 Score=17.24 Aligned_cols=19 Identities=26% Similarity=0.399 Sum_probs=14.3
Q ss_pred HHHcCCCCCCEEEEEeCCC
Q psy16164 106 LQKRGYRRGDIVSICSENR 124 (214)
Q Consensus 106 L~~~Gl~~gd~V~i~~~n~ 124 (214)
...+|+++||.|.+...+.
T Consensus 21 r~~lgi~~Gd~v~i~~~~~ 39 (53)
T 2l66_A 21 RQKFQIKEGDLVKVTFDES 39 (53)
T ss_dssp HHHSCCCTTCEEEEEECSS
T ss_pred HHHcCcCCCCEEEEEEECC
Confidence 3457999999998876543
No 69
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=21.21 E-value=3.8e+02 Score=22.74 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=53.6
Q ss_pred CCCceEEE---eCCCCe----eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHH-HHHHHHHcCCEEEecCC
Q psy16164 75 HYRLLFQI---DAVTDI----TYTYDDILQKSLQLADALQKRGYRRGDIVSICSENRLDYPV-LIVAASLLGITVSSINP 146 (214)
Q Consensus 75 ~pd~~al~---~~~~~~----~~Ty~el~~~~~~la~~L~~~Gl~~gd~V~i~~~n~~~~~~-~~lA~~~~G~i~vpl~~ 146 (214)
.++.++++ .+.+|. .+|.+.+...+.... .....++.++|++...+|-.-.... ..++++..|+..+...+
T Consensus 174 ~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~v~~~~ 252 (541)
T 1v25_A 174 PERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAAS-LVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGP 252 (541)
T ss_dssp CTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTT-STTTTCCCTTCEEEECSCTTSHHHHTHHHHHHHHTCEEEECTT
T ss_pred CCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhh-hcccccCCCCCEEEEeccchhhhHHHHHHHHHhcCceEEeeCC
Confidence 34566643 455553 588888764433210 1123478899999888886443322 45677888999888766
Q ss_pred CCchhHHHHHHHhhcCc
Q psy16164 147 QYTEVVKELSQHCVGGL 163 (214)
Q Consensus 147 ~~~~~~~~l~~~l~~s~ 163 (214)
.+.+ ..+...+..-+
T Consensus 253 ~~~~--~~~~~~i~~~~ 267 (541)
T 1v25_A 253 RLDP--ASLVELFDGEG 267 (541)
T ss_dssp CCSH--HHHHHHHHHTT
T ss_pred CCCH--HHHHHHHHhcC
Confidence 6666 77766666444
No 70
>2k5l_A FEOA; structure, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium thermocellum atcc 27405}
Probab=21.03 E-value=88 Score=19.50 Aligned_cols=22 Identities=23% Similarity=0.235 Sum_probs=17.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEeC
Q psy16164 101 QLADALQKRGYRRGDIVSICSE 122 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~~ 122 (214)
.+.+.|.++|+.+|..|-+...
T Consensus 23 ~~~~rL~~lGl~pG~~v~V~~~ 44 (81)
T 2k5l_A 23 ALKRRIMDMGITRGCEIYIRKV 44 (81)
T ss_dssp HHHHHHHHHTCCTTCEEEEEEE
T ss_pred HHHHHHHHCCCCCCCEEEEEEe
Confidence 4567788899999999987643
No 71
>2h3j_A Hypothetical protein PA4359; NESG, GFT structural genomics, PAT89, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.34.1.2
Probab=20.18 E-value=88 Score=18.90 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=17.5
Q ss_pred HHHHHHHHcCCCCCCEEEEEeC
Q psy16164 101 QLADALQKRGYRRGDIVSICSE 122 (214)
Q Consensus 101 ~la~~L~~~Gl~~gd~V~i~~~ 122 (214)
.+.+.|.++|+.+|..|-+...
T Consensus 22 ~~~~rL~~lGl~~G~~v~v~~~ 43 (75)
T 2h3j_A 22 GYRQRLFSMGLLPGAALRVVRI 43 (75)
T ss_dssp THHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHcCCCCCCEEEEEEE
Confidence 3556788899999999988754
Done!