BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1618
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56597|NDK5_HUMAN Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens GN=NME5
PE=2 SV=1
Length = 212
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLA++KP E+I+ I GFTIV+++ + +PEQ + F++ E+ + P L
Sbjct: 13 EKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYV--EKYGKMFFPNL 70
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
YM SGP+ M+LA+ KAI WL L+GP + AK +P SLRA YG +D+ N
Sbjct: 71 TAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNA 125
>sp|Q99MH5|NDK5_MOUSE Nucleoside diphosphate kinase homolog 5 OS=Mus musculus GN=Nme5
PE=2 SV=2
Length = 211
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLAL+KP E+I+ I GFTI++++ +PE + F++ E+ + P L
Sbjct: 13 EKTLALIKPDVVDKEEEIQDIILGSGFTIIQRRKLHLSPEHCSNFYV--EQYGKMFFPNL 70
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
YM SGP+ M+LA+ KAI W LMGP + AK +P SLRA YG +++ N
Sbjct: 71 TAYMSSGPLVAMILARHKAISYWKELMGPSNSLVAKETHPDSLRAIYGTDELRNA 125
>sp|P90666|TXND3_HELCR Thioredoxin domain-containing protein 3 homolog OS=Heliocidaris
crassispina GN=NME8 PE=1 SV=1
Length = 837
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 49 EYTLALVKPHAFR-HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 107
E TLAL++P A + H +++ Q IQE GF + +K + T +QA EF+ +E+
Sbjct: 356 EKTLALIRPSALKDHKDEMLQKIQEAGFEVCLQKMVQLTEDQAKEFY--KEQEGTPHFED 413
Query: 108 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVND----IMNG 163
L+ M SG V + LAK+ AI+ W +GP D+AK P SLRA+Y + D +++G
Sbjct: 414 LIREMTSGEVLALGLAKESAIQSWREFIGPTTIDEAKEKAPDSLRAQYSIPDTQVNVVHG 473
Query: 164 SWVLQILTKQKEF 176
S + K+ F
Sbjct: 474 SDSVDTAEKELGF 486
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 49 EYTLALVKPHAF-RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 107
+ TLA++KP A H E I + I+E GF I ++ + E A++ ++ E ++ +
Sbjct: 491 QTTLAVIKPDAAGEHKEAIIEKIKEAGFNISLQRDVELNKELASKLYLEHEGKEFYE--N 548
Query: 108 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 162
L+ +M SG VMVL+++ A+ W LMGP DPD A+ P SLRA G + + N
Sbjct: 549 LIDHMSSGLSMVMVLSREDAVDGWRTLMGPTDPDYAREHAPESLRALLGKDVLQN 603
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 49 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T+ L+KP A HV+ I I+E GF I+ + T ++A EF+ EE + +V
Sbjct: 202 EVTVVLIKPDAVANGHVDSIIAKIEEHGFEILTTEDKTLTEDEAREFYKQHEEEEHFEV- 260
Query: 107 RLVCYMVSGPVRVMVLAK----QKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 162
LV +M SGP +++VL + + + +L+GP D + AK P SLRA++G + MN
Sbjct: 261 -LVTFMASGPSKILVLTRGDTGEGVVSEVRNLLGPKDIEVAKEEAPDSLRAQFGTDKKMN 319
>sp|Q8N427|TXND3_HUMAN Thioredoxin domain-containing protein 3 OS=Homo sapiens GN=NME8
PE=1 SV=2
Length = 588
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 42 VQNLHCYEYTLALVKPHAFR-HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREER 100
+Q+ + TL L+KPHA E I + ++E GF + + K TPEQ + + +
Sbjct: 444 IQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGK 503
Query: 101 DPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI 160
D K L+ + GP VM+L K A+ W LMGP DP++AK + P S+RA++G++ +
Sbjct: 504 DFYK--DLLEMLSVGPSMVMILTKWNAVAEWRRLMGPTDPEEAKLLSPDSIRAQFGISKL 561
Query: 161 MN 162
N
Sbjct: 562 KN 563
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 49 EYTLALVKPHAFR-HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 107
E TLAL++P+ F +D+ + I+++ F I++++ + ++A E D +
Sbjct: 316 EKTLALLRPNLFHERKDDVLRIIKDEDFKILEQRQVVLSEKEAQALCKEYENEDYFN--K 373
Query: 108 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI 160
L+ M SGP +VL + ++ W L+GP ++A +P SL A++ ++ +
Sbjct: 374 LIENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQFAMDSL 426
>sp|Q715T0|TXND3_MOUSE Thioredoxin domain-containing protein 3 OS=Mus musculus GN=Nme8
PE=2 SV=1
Length = 586
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 51 TLALVKPHAFRHVEDIE--QTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
TLAL+KPH H E +E +TI+E GF + K TPE A + + +D K +
Sbjct: 450 TLALIKPHV-THKERMEILKTIKEAGFELTLMKEMHLTPEHANKIYFKITGKDFYK--NV 506
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
+ + G VMVL K A+ W ++GPVDP++AK + P SLRAKYG++ + N
Sbjct: 507 LEVLSLGMSLVMVLTKWNAVAEWRRMVGPVDPEEAKLLSPESLRAKYGLDILRNA 561
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 51 TLALVKPHAFRH-VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRLV 109
TLAL+ P +D+ I +GFTI+ ++ + E+A E + L+
Sbjct: 315 TLALLHPDICEEEKDDVLNVIHNEGFTILMQRQIVLSEEEARTVCKIHENEE--YFDNLI 372
Query: 110 CYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
+M S V+ L ++ + W L+GP ++A +P SL ++
Sbjct: 373 GHMTSNHSYVLALRRENGVEYWKTLIGPKTIEEAYASHPQSLCVQFA 419
>sp|Q715S9|TXND3_RAT Thioredoxin domain-containing protein 3 OS=Rattus norvegicus
GN=Nme8 PE=2 SV=2
Length = 587
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 51 TLALVKPHAFRHVEDIE--QTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
TLAL+KPH H E +E + I++ F + + K TPE A++ + +D K +
Sbjct: 451 TLALIKPHV-SHKERMEILKAIRDARFELTQMKEMHLTPEHASKVYFKITGKDFYK--NV 507
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
+ + SG VM+L K A+ W +MGPVDP++AK + P SLRA+YG++ + N
Sbjct: 508 LDVLSSGMSVVMILTKWNAVGEWRRMMGPVDPEEAKLLSPNSLRARYGIDVLRNA 562
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 51 TLALVKPHAFRHVED-IEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRLV 109
TL L+ P +D + IQ +GFTI+ ++ + E+A E+ D L+
Sbjct: 316 TLGLLYPEVCEEEKDNVLDIIQNEGFTILMQRQVVLSEEEARAVCHVHEDED--YFDNLI 373
Query: 110 CYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
YM S ++VL ++ ++ RW L+GP ++A +P SL ++
Sbjct: 374 GYMCSNNSYILVLMREHSVERWKELIGPKTVEEAYASHPDSLCVRFA 420
>sp|O75414|NDK6_HUMAN Nucleoside diphosphate kinase 6 OS=Homo sapiens GN=NME6 PE=1 SV=3
Length = 186
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 39 APIVQNLHCYEYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFI 95
A I+++ + TLAL+KP A H +E + Q I F IV+ + + E F+
Sbjct: 2 ASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFY- 60
Query: 96 TREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKY 155
RE RLV +M SGP+R +LA + AI+ W LMGP +A+ + P S+R +
Sbjct: 61 -REHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSF 119
Query: 156 GVNDIMN 162
G+ D N
Sbjct: 120 GLTDTRN 126
>sp|O88426|NDK6_RAT Nucleoside diphosphate kinase 6 (Fragment) OS=Rattus norvegicus
GN=Nme6 PE=2 SV=1
Length = 175
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 49 EYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKV 105
+ TLAL+KP A H +E + Q I F IV+ + + PE F+ RE
Sbjct: 1 QLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWKPEDCRRFY--REHEGRFFY 58
Query: 106 PRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 162
RLV +M SGP+R +LA + AI+ W LMGP +A+ I P S+R G+ D N
Sbjct: 59 QRLVEFMTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARHIAPDSIRGSLGLTDTRN 115
>sp|O67528|NDK_AQUAE Nucleoside diphosphate kinase OS=Aquifex aeolicus (strain VF5)
GN=ndk PE=1 SV=1
Length = 142
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 49 EYTLALVKPHAFRHV---EDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKV 105
E TL +VKP A + +++ IQE GF I K F+FTPE+A EF+ ER +
Sbjct: 4 ERTLIIVKPDAMEKGALGKILDRFIQE-GFQIKALKMFRFTPEKAGEFYYVHRERPFFQ- 61
Query: 106 PRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 162
LV +M SGPV VL + AI+R ++GP D ++A+++ P S+RA++G + N
Sbjct: 62 -ELVEFMSSGPVVAAVLEGEDAIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKN 117
>sp|O88425|NDK6_MOUSE Nucleoside diphosphate kinase 6 OS=Mus musculus GN=Nme6 PE=2 SV=1
Length = 189
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 41 IVQNLHCYEYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITR 97
I+++ + TLAL+KP A H +E + Q I F IV+ + ++ E F+ R
Sbjct: 4 ILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRTRELQWKLEDCRRFY--R 61
Query: 98 EERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGV 157
E RLV +M SGP+R +LA + AI+ W LMGP +A+ I P S+R G+
Sbjct: 62 EHEGRFFYQRLVEFMTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARYIAPDSIRGSLGL 121
Query: 158 NDIMN 162
D N
Sbjct: 122 TDTRN 126
>sp|Q95YJ5|TXND3_CIOIN Thioredoxin domain-containing protein 3 homolog OS=Ciona
intestinalis GN=CiIC3 PE=2 SV=1
Length = 653
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLA++KP A E I ++E GF I +K + E A+E + ++E + L
Sbjct: 460 EQTLAVIKPDAIDEKEQIMGKLKEAGFMISCQKDMNLSKEIASEIYKSKEGSE--YYDHL 517
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
+ +M SGP +MVL+ + A+ + +MGP DP+ AK +P SLRA + + + N
Sbjct: 518 IDHMTSGPTLMMVLSAENAVEKLRDIMGPTDPEVAKESHPESLRAMFAKSILENA 572
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 51 TLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
T+AL+KP ++ V++I Q I E G ++ + T E+A +F+ +EE + +L
Sbjct: 158 TVALIKPDVVQNGQVDEILQKISEAGIEVLADEERMLTVEEARDFYKNKEEEE--YFDQL 215
Query: 109 VCYMVSGPVRVMVLAKQKA----IRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
+ Y+ SGP RV+VL K ++ + W ++GP D AK P SLRA YG + N
Sbjct: 216 IDYVTSGPCRVLVLTKGESGEGVVTLWRDIIGPFDAAVAKEENPDSLRAIYGTDATSNA 274
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 51 TLALVKPHAFR-HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRLV 109
TLA+++P A + H + I Q I E GF I +K T EQA F+ E +D LV
Sbjct: 327 TLAIIRPDALQAHKDSILQKIDEAGFKIAMQKEMVLTREQAESFY--SEHKDTDYFEPLV 384
Query: 110 CYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN----DIMNGS 164
M GPV + LA A+ W ++GP A P SLRA++ V ++++GS
Sbjct: 385 KQMTCGPVLALCLAHDDAVDHWRSMLGPKVVADAVEEQPDSLRAQFRVEEAEVNMLHGS 443
>sp|Q9QXL8|NDK7_MOUSE Nucleoside diphosphate kinase 7 OS=Mus musculus GN=Nme7 PE=2 SV=1
Length = 395
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLAL+KP A +I + I + GFTI K + T ++AA+F + R L
Sbjct: 111 EKTLALIKPDAVSKAGEIIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYN--EL 168
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
+ ++ SGPV M + + AI W L+GP + ++ P S+RA +G + + N +
Sbjct: 169 IQFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRALFGTDGVRNAA 224
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 16/137 (11%)
Query: 34 GDEVPAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAA 91
G PA + +C T ++KPHA + I++ F + + F
Sbjct: 245 GGCGPANTAKFTNC---TCCIIKPHAISEGMLGKNLIAIRDACFGMSAIQMFNLDRANVE 301
Query: 92 EFF-----ITREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRI 146
EF+ + E D +V + SGP + + + + + GP DP+ A+ +
Sbjct: 302 EFYEVYKGVVSEYND------MVTELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARHL 355
Query: 147 YPLSLRAKYGVNDIMNG 163
P +LRA +G + N
Sbjct: 356 RPETLRAIFGKTKVQNA 372
>sp|Q9QXL7|NDK7_RAT Nucleoside diphosphate kinase 7 OS=Rattus norvegicus GN=Nme7 PE=1
SV=1
Length = 395
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLAL+KP A +I + I + GFTI K + + ++AA+F + R L
Sbjct: 111 EKTLALIKPDAVSKAGEIIEMINKSGFTITKLRMMTLSRKEAADFHVDHHSRPFYN--EL 168
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
+ ++ SGPV M + + AI W L+GP + A+ P S+RA +G + I N +
Sbjct: 169 IQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAPGSVRALFGTDGIRNAA 224
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Query: 34 GDEVPAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAA 91
G P + +C T ++KPHA + I I++ F I + F
Sbjct: 245 GGCGPTNTAKFTNC---TCCIIKPHAISEGMLGKILIAIRDACFEISAIQMFNMDRANVE 301
Query: 92 EFF-----ITREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRI 146
EF+ + + D +V + SGP + + + + + GP DP+ A+ +
Sbjct: 302 EFYEVYKGVLSDYND------MVTELYSGPCVAIEIQQSNPTKTFREFCGPSDPEIARHL 355
Query: 147 YPLSLRAKYGVNDIMN 162
P +LRA +G + N
Sbjct: 356 RPETLRANFGKTKVQN 371
>sp|Q5E9Y9|NDK7_BOVIN Nucleoside diphosphate kinase 7 OS=Bos taurus GN=NME7 PE=2 SV=1
Length = 377
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLAL+KP A +I + I + GFT+ K K + ++A +F I + R + L
Sbjct: 92 EKTLALIKPDAVSKAGEIIEIINKAGFTLTKLKMMTLSRKEATDFHIDHQSRPFLN--EL 149
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
+ ++ SGP+ M + + A+ W L+GP + A+ P S+RA +G + I N +
Sbjct: 150 IQFITSGPIIAMEILRDDAVCEWKRLLGPANSGLARTDAPESIRALFGTDGIKNAA 205
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 38 PAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFF- 94
PA + +C T +VKPHA + I TI++ GF I + F EF+
Sbjct: 230 PANTAKFTNCT--TCCIVKPHAVSEGLLGKILMTIRDAGFEISAMQMFNMDRINVEEFYE 287
Query: 95 ----ITREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLS 150
+ E + +V M SGP M + + + GP DP+ A+ + P +
Sbjct: 288 VYKGVVSEYNE------MVTEMYSGPCVAMEIQQTNPTMTFREFCGPADPEIARHLRPGT 341
Query: 151 LRAKYGVNDIMNG 163
LRA +G I N
Sbjct: 342 LRAIFGKTKIQNA 354
>sp|Q6DI51|NDK6_DANRE Nucleoside diphosphate kinase 6 OS=Danio rerio GN=nme6 PE=2 SV=1
Length = 175
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 49 EYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKV 105
+ TLA++KP A H +E + Q I E F I++KK + + F+ R
Sbjct: 8 QLTLAVIKPDAMAHPLILEALHQKILE-NFIIIRKKDLIWRKADSEMFYAEHSGR--FFF 64
Query: 106 PRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
RLV +M SGP+R +LA++ AI W +MGP +A+ P +LR KYG+ D N +
Sbjct: 65 QRLVEFMSSGPMRAYILAREDAITHWRTMMGPTKVFRARFSSPETLRGKYGLTDTRNTT 123
>sp|Q3A2Z3|NDK_PELCD Nucleoside diphosphate kinase OS=Pelobacter carbinolicus (strain
DSM 2380 / Gra Bd 1) GN=ndk PE=3 SV=1
Length = 137
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TLA++KP AF H I I E+GF ++ K + +QAA F+ E + P
Sbjct: 2 ERTLAIIKPDAFAAGHAGGILARIYEEGFRVIGMKKLALSEKQAAGFYYVHEGK-PF-FD 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
L +M SGP VMVL AIR+W LMG +P A +LR ++G +
Sbjct: 60 DLKGFMSSGPCVVMVLEADGAIRKWRDLMGATNPADAA---AGTLRKEFGTS 108
>sp|B3DL53|NDK6_XENTR Nucleoside diphosphate kinase 6 OS=Xenopus tropicalis GN=nme6 PE=2
SV=1
Length = 179
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 51 TLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 107
TLAL+KP A + E + Q I E F I++ K + + F+ E + R
Sbjct: 13 TLALIKPDAVANPVISEAVHQKILENNFLIIRHKELHWRSTDSQRFYC--EHKGRFFYQR 70
Query: 108 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 162
LV +M SGP++ +LA + A++ W +LMGP +A+ + P ++R G+ D N
Sbjct: 71 LVEFMSSGPMQAYILAHEDAVQLWRNLMGPTKVFRARIVAPGTVRGDLGLTDTRN 125
>sp|Q9Y5B8|NDK7_HUMAN Nucleoside diphosphate kinase 7 OS=Homo sapiens GN=NME7 PE=1 SV=1
Length = 376
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 49 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
E TLAL+KP A +I + I + GFTI K K + ++A +F + + R P L
Sbjct: 92 EKTLALIKPDAISKAGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSR-PF-FNEL 149
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
+ ++ +GP+ M + + AI W L+GP + A+ S+RA +G + I N +
Sbjct: 150 IQFITTGPIIAMEILRDDAICEWKRLLGPANSGVARTDASESIRALFGTDGIRNAA 205
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 34 GDEVPAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAA 91
G PA + +C T +VKPHA + I I++ GF I + F
Sbjct: 226 GGCGPANTAKFTNC---TCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVE 282
Query: 92 EFF-----ITREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRI 146
EF+ + E D +V M SGP M + + A + + GP DP+ A+ +
Sbjct: 283 EFYEVYKGVVTEYHD------MVTEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHL 336
Query: 147 YPLSLRAKYGVNDIMN 162
P +LRA +G I N
Sbjct: 337 RPGTLRAIFGKTKIQN 352
>sp|B0USF1|NDK_HAES2 Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 2336)
GN=ndk PE=3 SV=1
Length = 141
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TLA++KP A + +I +++KGF I+ K EQA F+ E R+
Sbjct: 4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFY--AEHRNKAFFT 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
LV YM S P+ V+VL K+ A++ + MG +P+ A+ +LR ++ +N N
Sbjct: 62 ELVKYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAEN---GTLRYEFAINQTQNS 115
>sp|Q0I2G6|NDK_HAES1 Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt)
GN=ndk PE=3 SV=1
Length = 141
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TLA++KP A + +I +++KGF I+ K EQA F+ E D
Sbjct: 4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYT--EHSDKAFFA 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNG 163
L+ YM S P+ V+VL K+ A++ + MG +P+ A+ +LR ++ +N N
Sbjct: 62 ELIRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAEN---GTLRYEFAINQTQNS 115
>sp|Q5E776|NDK_VIBF1 Nucleoside diphosphate kinase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=ndk PE=3 SV=1
Length = 144
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T ++VKP A + + I + I++ G IV K + T EQA F+ E ++
Sbjct: 4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFD-- 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
LV YM+SGPV V VL + A+ R+ LMG +P++A SLRA Y ++
Sbjct: 62 ELVAYMMSGPVMVQVLEGENAVVRYRELMGKTNPEEAA---CGSLRADYAIS 110
>sp|B5FAW8|NDK_VIBFM Nucleoside diphosphate kinase OS=Vibrio fischeri (strain MJ11)
GN=ndk PE=3 SV=1
Length = 144
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T ++VKP A + + I + I++ G IV K + T EQA F+ E ++
Sbjct: 4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFD-- 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
LV YM+SGPV V VL + A+ R+ LMG +P++A SLRA Y ++
Sbjct: 62 ELVAYMMSGPVMVQVLEGENAVVRYRELMGKTNPEEAA---CGSLRADYAIS 110
>sp|Q86XW9|TXND6_HUMAN Thioredoxin domain-containing protein 6 OS=Homo sapiens GN=NME9
PE=1 SV=1
Length = 330
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 51 TLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
TLA++KP A H ++I IQE GF I+ + T + F+ + + + +L
Sbjct: 161 TLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVRLFYQHKAGEEAFE--KL 218
Query: 109 VCYMVSGPVRVMVLAKQKA----IRRWLHLMGPVDPDKAKRIYPLSLRAKYGV 157
V +M SGP +++L + + + W +MGP DP+ A+R P SLRA+YG
Sbjct: 219 VHHMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGT 271
>sp|B6IN60|NDK_RHOCS Nucleoside diphosphate kinase OS=Rhodospirillum centenum (strain
ATCC 51521 / SW) GN=ndk PE=3 SV=1
Length = 140
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 47 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 104
E TL++VKP A R I +E G IV +K + T EQA +F+I ER P
Sbjct: 2 AVERTLSIVKPDATRRNLTGKINARFEEAGLRIVAQKRIRLTREQAEQFYIVHAER-PF- 59
Query: 105 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKY 155
LV +M+SGPV V VL + A+ R +MG +P A P ++R +
Sbjct: 60 YGELVSFMISGPVVVQVLEGENAVARNREIMGATNPANAA---PGTIRKDF 107
>sp|Q312A8|NDK_DESDG Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans
(strain G20) GN=ndk PE=3 SV=1
Length = 139
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 49 EYTLALVKPHAFR-HVED-IEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T A++KP A R ++E I IQ+ G +V K + T EQA F+ +ER P
Sbjct: 3 ERTFAIIKPDATRRNLEGPILSVIQQNGLRVVAMKKMRLTREQAEGFYHVHKER-PF-FA 60
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKA 143
L +M SGP+ MVL A+ RW LMG +P+ A
Sbjct: 61 SLTDFMTSGPIVAMVLEGDNAVARWRELMGATNPENA 97
>sp|B8IZ74|NDK_DESDA Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans
(strain ATCC 27774 / DSM 6949) GN=ndk PE=3 SV=1
Length = 139
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
+ T A++KP A +I ++ G IV K + QAA F+ ER P
Sbjct: 3 QSTFAIIKPDAVSRQLTGEILAAMEASGLKIVALKRLHLSKAQAAGFYAVHRER-PF-FD 60
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
L YM SGPV +VL + A+ RW LMG +P +A+ P +LRA+YG
Sbjct: 61 SLTDYMSSGPVVCVVLRGEDAVPRWRALMGATNPAQAE---PGTLRARYG 107
>sp|B6EGY3|NDK_ALISL Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain
LFI1238) GN=ndk PE=3 SV=1
Length = 144
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T ++VKP A + + I + I++ G +V K T EQA F+ E ++
Sbjct: 4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDA- 62
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
LV YM SGPV V VL + I R+ LMG +PD+A SLR+ Y ++
Sbjct: 63 -LVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEAA---CGSLRSDYAIS 110
>sp|Q6MGU4|NDK_BDEBA Nucleoside diphosphate kinase OS=Bdellovibrio bacteriovorus (strain
ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) GN=ndk PE=3
SV=1
Length = 141
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T +++KP+A + + DI + G I K T +A EF+ + R P
Sbjct: 4 EQTFSIIKPNAMKKNAIGDIVSMFEANGLKIAAAKITVLTTAKAEEFYAEHKAR-PF-FG 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
LV +M SGPV +M L + A+ + +MG DP KA P ++RAK+G N
Sbjct: 62 ELVSFMTSGPVMLMCLQGEGAVLKNREIMGATDPKKAN---PGTVRAKFGDN 110
>sp|Q9CM17|NDK_PASMU Nucleoside diphosphate kinase OS=Pasteurella multocida (strain
Pm70) GN=ndk PE=3 SV=1
Length = 139
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 49 EYTLALVKPHAF-RH-VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+L+KP A RH + I ++ GF +V K T QA F+ E +D P
Sbjct: 4 ERTLSLIKPDAVKRHLIGAILSRFEQAGFRVVAAKMLHLTQAQAEGFYA--EHQDKAFFP 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDP 140
LV YM+S PV +VL K+ A++ + L+G +P
Sbjct: 62 ELVAYMISAPVLALVLEKENAVKDYRTLIGATNP 95
>sp|Q5L6Z2|NDK_CHLAB Nucleoside diphosphate kinase OS=Chlamydophila abortus (strain
S26/3) GN=ndk PE=3 SV=1
Length = 141
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+++KP + H+ +I ++ GF I K + ++A F+ + R +
Sbjct: 2 EQTLSIIKPDSVGKAHIGEIIAIFEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQ-- 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
LV +M+SGPV VMVL A+ R +MG +P +A P ++RA++G
Sbjct: 60 ELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAA---PGTIRAQFG 106
>sp|B0SJT4|NDK_LEPBP Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / ATCC 23582 / Paris) GN=ndk PE=3 SV=1
Length = 137
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 49 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T ++KP A + H+ DI Q I+++GF I+ K K + E A +F+ R P
Sbjct: 2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAAR-PF-YN 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAK 144
L YM SGP+ L + A+ W ++G DP +AK
Sbjct: 60 DLCTYMASGPIVACALERDNAVAHWRDVIGATDPKEAK 97
>sp|B0S9J3|NDK_LEPBA Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / Ames) GN=ndk PE=3 SV=1
Length = 137
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 49 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T ++KP A + H+ DI Q I+++GF I+ K K + E A +F+ R P
Sbjct: 2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAAR-PF-YN 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAK 144
L YM SGP+ L + A+ W ++G DP +AK
Sbjct: 60 DLCTYMASGPIVACALERDNAVAHWRDVIGATDPKEAK 97
>sp|Q6MEA9|NDK1_PARUW Nucleoside diphosphate kinase 1 OS=Protochlamydia amoebophila
(strain UWE25) GN=ndk1 PE=3 SV=2
Length = 141
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 47 CYEYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 104
E TL+++KP A + ++ +I ++ G I K T +QA++F+ ++R P
Sbjct: 2 ASEQTLSIIKPDAVQNNYIGEIISRFEQAGLKIAAIKMTTLTKDQASKFYAIHKDR-PF- 59
Query: 105 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
LV +M SGPV VMVL +AI + LMG DP KA++ +LRA +
Sbjct: 60 YNDLVNFMSSGPVVVMVLEGNQAIAKNRELMGATDPKKAEK---GTLRADFA 108
>sp|A1AU17|NDK_PELPD Nucleoside diphosphate kinase OS=Pelobacter propionicus (strain DSM
2379) GN=ndk PE=3 SV=1
Length = 137
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T A++KP A R + I+ GFTIV K K + EQA F+ ER P
Sbjct: 2 ERTFAIIKPDAVERRLAGTVIDRIEANGFTIVGMKKIKLSKEQAGGFYCVHRER-PF-FG 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKA-----KRIYPLSL 151
L +M PV V+ L K+ AI W LMG +P A +R + LSL
Sbjct: 60 ELCDFMSRSPVIVLCLEKENAIADWRKLMGATNPANAEPGTIRRDFALSL 109
>sp|A5FY40|NDK_ACICJ Nucleoside diphosphate kinase OS=Acidiphilium cryptum (strain JF-5)
GN=ndk PE=3 SV=1
Length = 140
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 47 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 104
E TL+++KP A R I +E G IV +K + T +QA F+ +ER P
Sbjct: 2 ATERTLSIIKPDATRRNLTGRINAKFEEAGLRIVAQKRIRLTKDQAEAFYGVHKER-PF- 59
Query: 105 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKY 155
LV +M SGPV V VL A+ R +MG DP KA+ ++RA++
Sbjct: 60 FAGLVSFMTSGPVVVQVLEGDDAVARNRAIMGATDPRKAE---AGTIRAEF 107
>sp|Q0BQG5|NDK_GRABC Nucleoside diphosphate kinase OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=ndk PE=3 SV=2
Length = 140
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 47 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 104
E T +++KP A R I +E G IV +K + + QA F+ ER P
Sbjct: 2 AIERTFSIIKPDATRRNLTGRINAVFEENGLRIVAQKRVQLSQAQAEAFYGVHRER-PF- 59
Query: 105 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKY 155
LV +M+SGPV V VL + A+ R LMG DP KA ++RA++
Sbjct: 60 FNDLVSFMISGPVVVQVLEGENAVARNRELMGATDPKKAD---AGTIRAQF 107
>sp|C1DE61|NDK_AZOVD Nucleoside diphosphate kinase OS=Azotobacter vinelandii (strain DJ
/ ATCC BAA-1303) GN=ndk PE=3 SV=1
Length = 143
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+++KP A + +I ++ G ++V K + + +A F+ +ER K
Sbjct: 4 ERTLSIIKPDAVAKNVIGEILTRFEKAGLSVVAAKMVQLSEREAGGFYAEHKERPFFK-- 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
LV +M SGPV V VL + AI + LMG DP KA+ P ++RA + V+
Sbjct: 62 DLVSFMTSGPVVVQVLEGEGAIAKNRELMGATDPKKAE---PGTIRADFAVS 110
>sp|B4EZT7|NDK_PROMH Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320)
GN=ndk PE=3 SV=1
Length = 141
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 51 TLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 108
T +++KP+A + + I + GF+IV K T EQA F+ E + L
Sbjct: 6 TFSIIKPNAVKKNVIGAIYNRFESAGFSIVAAKMLHLTREQAEGFY--EEHKGRPFFDGL 63
Query: 109 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKY 155
V +M SGP+ V VL + AI+R LMG +PD A +LRA Y
Sbjct: 64 VEFMTSGPIMVQVLEGENAIQRHRDLMGATNPDNA---LAGTLRADY 107
>sp|B3Q9R4|NDK_RHOPT Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain
TIE-1) GN=ndk PE=3 SV=1
Length = 140
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 47 CYEYTLALVKPHAF-RHVED-IEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 104
E T +++KP A R++ I I++ G IV +K + T +QA F+ +ER P
Sbjct: 2 AIERTFSILKPDATERNITGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKER-PF- 59
Query: 105 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
LV +M+SGPV V VL + AI ++ +MG DP KA L AK + ++GS
Sbjct: 60 FGELVDFMISGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIGENSVHGS 119
>sp|Q6N5C3|NDK_RHOPA Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=ndk PE=3 SV=1
Length = 140
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 47 CYEYTLALVKPHAF-RHVED-IEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 104
E T +++KP A R++ I I++ G IV +K + T +QA F+ +ER P
Sbjct: 2 AIERTFSILKPDATERNITGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKER-PF- 59
Query: 105 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNGS 164
LV +M+SGPV V VL + AI ++ +MG DP KA L AK + ++GS
Sbjct: 60 FGELVDFMISGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIGENSVHGS 119
>sp|B3PDL7|NDK_CELJU Nucleoside diphosphate kinase OS=Cellvibrio japonicus (strain
Ueda107) GN=ndk PE=3 SV=1
Length = 141
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 49 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T +++KP A + H+ I ++ G ++ ++ + TP QA F+ + R
Sbjct: 4 EQTFSIIKPDAVKNNHIGAIVARFEKAGLKVIAQRMLQLTPAQAEGFYAEHKGRSFYD-- 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVN 158
LV +M SGPV V VL + AI LMG DP KA P ++RA + ++
Sbjct: 62 ELVAFMTSGPVVVQVLYGENAIALNRELMGATDPTKAA---PGTIRADFSMS 110
>sp|Q6ALU8|NDK_DESPS Nucleoside diphosphate kinase OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=ndk PE=3 SV=1
Length = 137
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 49 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T A++KP AF + I I ++GFT++ K + +A F+ ++ P
Sbjct: 2 EKTFAIIKPDAFAAGNAGKILARIYQEGFTVIGLKKLCMSQREAEGFYAVHNKK-PF-FA 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGV 157
L +M SGP VMVL + I +W LMG +P AK P SLR ++G
Sbjct: 60 ELTKFMSSGPCIVMVLEAEGCIGKWRDLMGATNPADAK---PGSLRREFGT 107
>sp|B8DNF4|NDK_DESVM Nucleoside diphosphate kinase OS=Desulfovibrio vulgaris (strain
Miyazaki F / DSM 19637) GN=ndk PE=3 SV=1
Length = 139
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 49 EYTLALVKPHAF-RHVED-IEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T +++KP A R++ I + IQ+ G +V K T QA F+ ER P
Sbjct: 3 ERTFSIIKPDAVERNLSGAILKMIQDSGLKVVAMKMIHLTRSQAEGFYAVHRER-PF-FD 60
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKA-----KRIYPLSLRAK 154
LV YM SGPV VL AI+R+ LMG +P A ++ Y +S+ A
Sbjct: 61 SLVTYMCSGPVVCSVLEGDNAIQRYRDLMGATNPANAAEGTIRKTYAVSIEAN 113
>sp|B3CVG2|NDK_ORITI Nucleoside diphosphate kinase OS=Orientia tsutsugamushi (strain
Ikeda) GN=ndk PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
EYTL+++KP + + + I+ G I+ +KT T QA F+I ++R +
Sbjct: 4 EYTLSILKPDVIKRNIIGKVNTYIENSGLKIIAQKTLLLTKVQAENFYIIHKDRAYYQ-- 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKR 145
LV M SGPV V VL A++++ ++G +P AK+
Sbjct: 62 SLVQNMTSGPVVVQVLYGLNAVKKYREIIGATNPCDAKK 100
>sp|A5CF69|NDK_ORITB Nucleoside diphosphate kinase OS=Orientia tsutsugamushi (strain
Boryong) GN=ndk PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
EYTL+++KP + + + I+ G I+ +KT T QA F+I ++R +
Sbjct: 4 EYTLSILKPDVIKRNIIGKVNTYIENSGLKIIAQKTLLLTKVQAENFYIIHKDRAYYQ-- 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKR 145
LV M SGPV V VL A++++ ++G +P AK+
Sbjct: 62 SLVQNMTSGPVVVQVLYGLNAVKKYREIIGATNPCDAKK 100
>sp|A7MU38|NDK_VIBHB Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=ndk PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 49 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E T ++VKP A + +I I++ G IV K T EQA+ F+ E + P P
Sbjct: 4 ERTFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGK-PF-FP 61
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKA-----KRIYPLSLRAKYGVNDIM 161
L +M SGP+ V VL + AI R+ LMG +P++A + Y LS+R ++ +
Sbjct: 62 ALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMR-----HNSV 116
Query: 162 NGSWVLQILTKQKEF 176
+GS + ++ EF
Sbjct: 117 HGSDSPESAAREIEF 131
>sp|B0BCD9|NDK_CHLTB Nucleoside diphosphate kinase OS=Chlamydia trachomatis serovar L2b
(strain UCH-1/proctitis) GN=ndk PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+++KP + H+ +I ++ G I K + ++A F++ +ER +
Sbjct: 2 EQTLSIIKPDSVGKAHIGEIIAIFEKSGLRIAAMKMVHLSVKEAEGFYVVHKERPFFQ-- 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
LV +M+SGPV VMVL + A+ R LMG +P +A S+RA +G
Sbjct: 60 ELVDFMISGPVVVMVLQGENAVARNRELMGATNPKEAAE---GSIRALFG 106
>sp|B0B874|NDK_CHLT2 Nucleoside diphosphate kinase OS=Chlamydia trachomatis serovar L2
(strain 434/Bu / ATCC VR-902B) GN=ndk PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+++KP + H+ +I ++ G I K + ++A F++ +ER +
Sbjct: 2 EQTLSIIKPDSVGKAHIGEIIAIFEKSGLRIAAMKMVHLSVKEAEGFYVVHKERPFFQ-- 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
LV +M+SGPV VMVL + A+ R LMG +P +A S+RA +G
Sbjct: 60 ELVDFMISGPVVVMVLQGENAVARNRELMGATNPKEAAE---GSIRALFG 106
>sp|Q3KLJ7|NDK_CHLTA Nucleoside diphosphate kinase OS=Chlamydia trachomatis serovar A
(strain HAR-13 / ATCC VR-571B) GN=ndk PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+++KP + H+ +I ++ G I K + ++A F++ +ER +
Sbjct: 2 EQTLSIIKPDSVGKAHIGEIIAIFEKSGLRIAAMKMVHLSVKEAEGFYVVHKERPFFQ-- 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
LV +M+SGPV VMVL + A+ R LMG +P +A S+RA +G
Sbjct: 60 ELVDFMISGPVVVMVLQGENAVARNRELMGATNPKEAAE---GSIRALFG 106
>sp|O84508|NDK_CHLTR Nucleoside diphosphate kinase OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=ndk PE=3 SV=1
Length = 141
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 49 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 106
E TL+++KP + H+ +I ++ G I K + ++A F++ +ER +
Sbjct: 2 EQTLSIIKPDSVGKAHIGEIIAIFEKSGLRIAAMKMVHLSVKEAEGFYVVHKERPFFQ-- 59
Query: 107 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYG 156
LV +M+SGPV VMVL + A+ R LMG +P +A S+RA +G
Sbjct: 60 ELVDFMISGPVVVMVLQGENAVDRNRELMGATNPKEAAE---GSIRALFG 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,143,120
Number of Sequences: 539616
Number of extensions: 2473193
Number of successful extensions: 10561
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 9951
Number of HSP's gapped (non-prelim): 694
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)