RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy16181
(480 letters)
>gnl|CDD|214615 smart00318, SNc, Staphylococcal nuclease homologues.
Length = 137
Score = 68.4 bits (168), Expect = 6e-14
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 236 IVKAVIDNINPGLTMRAFLLPDHYYVAFCLSGIK----------IVRENEEYGREVRQYL 285
+V+ VID G T+R LP + LSGI +E +G E +++L
Sbjct: 6 VVERVID----GDTIR-VRLPKGPLITIRLSGIDAPETARPNKGDGTPDEPFGEEAKEFL 60
Query: 286 EERILQRDVNVIIESVQNEKNRIMNATLIHEGQKMNIGELLVREGFASC-NTLLQGVYDE 344
++ +L + V V ++S R + T+ G NI E LV+EG A + Y
Sbjct: 61 KKLLLGKKVQVEVDSKDRY-GRFL-GTVYLNGG-NNIAEELVKEGLAKVYRYADKDEYVY 117
Query: 345 KKLREAEKLAQSERKRRW 362
+L EAE+ A+ RK W
Sbjct: 118 DELLEAEEAAKKARKGLW 135
Score = 68.1 bits (167), Expect = 7e-14
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 10 YRKGLVKFVNSGDSITLITDPKLRTEVTFLFTNVQAPKIARRPRADGPPSAQPEDEPYAW 69
+G+V+ V GD+I + +T + + AP+ AR + DG P DEP+
Sbjct: 2 EIRGVVERVIDGDTIRVRLPKG--PLITIRLSGIDAPETARPNKGDGTP-----DEPFGE 54
Query: 70 EAREFLRKLIIGKIVWYTAEKPEGN-RYYGTLFYPNQDD 107
EA+EFL+KL++GK V + + R+ GT++ ++
Sbjct: 55 EAKEFLKKLLLGKKVQVEVDSKDRYGRFLGTVYLNGGNN 93
Score = 51.5 bits (124), Expect = 5e-08
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 372 KERAAVVLEIINGDGLVIKYVGDTKEEKVFLSSIKPPRPDGAAAGGGGEGKAPVVRSKPL 431
KE VV +I+GD + ++ + LS I P G G +
Sbjct: 1 KEIRGVVERVIDGDTIRVRLPKG-PLITIRLSGIDAPETARPNKGDGTPDE--------- 50
Query: 432 YDVPWLYEAREFLRTRLIGKKVMVSEDY 459
P+ EA+EFL+ L+GKKV V D
Sbjct: 51 ---PFGEEAKEFLKKLLLGKKVQVEVDS 75
Score = 31.5 bits (72), Expect = 0.42
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 160 FLRTEFPPTDDDITKLLISEGWVSLRSKNPD-------LLDLENKAKEAGKGKYS 207
FL T + ++I + L+ EG + LL+ E AK+A KG +S
Sbjct: 82 FLGTVYLNGGNNIAEELVKEGLAKVYRYADKDEYVYDELLEAEEAAKKARKGLWS 136
>gnl|CDD|238102 cd00175, SNc, Staphylococcal nuclease homologues. SNase homologues
are found in bacteria, archaea, and eukaryotes. They
contain no disufide bonds.
Length = 129
Score = 63.4 bits (155), Expect = 3e-12
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 253 FLLPDHYYVAFCLSGIKIVREN----------EEYGREVRQYLEERILQRDVNVIIESVQ 302
LP + LSGI E +G E +++L++ +L + V V ++S
Sbjct: 10 VRLPPGPLITVRLSGIDAPETARPNKGKSETDEPFGEEAKEFLKKLLLGKKVQVEVDSK- 68
Query: 303 NEKNRIMNATLIHEGQKMNIGELLVREGFASC---NTLLQGVYDEKKLREAEKLAQSERK 359
++ T+ G + NI E LV+EG A YDE L EAE+ A+ RK
Sbjct: 69 -DRYGRTLGTVYLNGGE-NIAEELVKEGLARVYRYYPDDSEYYDE--LLEAEEAAKKARK 124
Query: 360 RRW 362
W
Sbjct: 125 GLW 127
Score = 61.9 bits (151), Expect = 9e-12
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 17 FVNSGDSITLITDPKLRTEVTFLFTNVQAPKIARRPRADGPPSAQPEDEPYAWEAREFLR 76
V GD+I + P +T + + AP+ AR DEP+ EA+EFL+
Sbjct: 1 RVIDGDTIRVRLPPG--PLITVRLSGIDAPETARPN-----KGKSETDEPFGEEAKEFLK 53
Query: 77 KLIIGKIVWYTAEKPEGN-RYYGTLFYPNQ 105
KL++GK V + + R GT++
Sbjct: 54 KLLLGKKVQVEVDSKDRYGRTLGTVYLNGG 83
Score = 45.0 bits (107), Expect = 9e-06
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 381 IINGDGLVIKYVGDTKEEKVFLSSIKPPRPDGAAAGGGGEGKAPVVRSKPLYDVPWLYEA 440
+I+GD + ++ V LS I P G K D P+ EA
Sbjct: 2 VIDGDTIRVRLPPG-PLITVRLSGIDAPETARPNKG------------KSETDEPFGEEA 48
Query: 441 REFLRTRLIGKKVMVSEDY 459
+EFL+ L+GKKV V D
Sbjct: 49 KEFLKKLLLGKKVQVEVDS 67
Score = 31.1 bits (71), Expect = 0.51
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 171 DITKLLISEGWVSLR-------SKNPDLLDLENKAKEAGKGKYS 207
+I + L+ EG + +LL+ E AK+A KG +S
Sbjct: 85 NIAEELVKEGLARVYRYYPDDSEYYDELLEAEEAAKKARKGLWS 128
>gnl|CDD|201310 pfam00565, SNase, Staphylococcal nuclease homologue. Present in
all three domains of cellular life. Four copies in the
transcriptional coactivator p100: these, however, appear
to lack the active site residues of Staphylococcal
nuclease. Positions 14 (Asp-21), 34 (Arg-35), 39
(Asp-40), 42 (Glu-43) and 110 (Arg-87) (SNase numbering
in parentheses) are thought to be involved in
substrate-binding and catalysis.
Length = 106
Score = 47.3 bits (113), Expect = 7e-07
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 275 EEYGREVRQYLEERILQRDVNVIIESVQNEKNRIMNATLIHEGQKMNIGELLVREGFASC 334
+ +G+E +++L++ +L + V V+ R + + G+ NI E LV+EG A
Sbjct: 20 QPFGKEAKEFLKKLVLGKKVVVLEFDKDKY-GRTL-GYVYLNGK--NINEELVKEGLAW- 74
Query: 335 NTLLQGVYD-----EKKLREAEKLAQSERKRRWTN 364
+ Y +L AE+ A+ ++K W++
Sbjct: 75 ---VYKAYPPNFKHYDELLAAEEEAKKKKKGLWSD 106
Score = 38.5 bits (90), Expect = 8e-04
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 37 TFLFTNVQAPKIARRPRADGPPSAQPEDEPYAWEAREFLRKLIIGKIVWYTAEKPEG--N 94
+ AP+ A+ +P+ EA+EFL+KL++GK V E +
Sbjct: 1 RVRLVGIDAPETAKPNTPV---------QPFGKEAKEFLKKLVLGKKVVVL-EFDKDKYG 50
Query: 95 RYYGTLFYPNQD 106
R G ++ ++
Sbjct: 51 RTLGYVYLNGKN 62
Score = 28.4 bits (64), Expect = 2.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 435 PWLYEAREFLRTRLIGKKVMVSED 458
P+ EA+EFL+ ++GKKV+V E
Sbjct: 21 PFGKEAKEFLKKLVLGKKVVVLEF 44
>gnl|CDD|176993 CHL00052, rpl2, ribosomal protein L2.
Length = 273
Score = 33.3 bits (77), Expect = 0.19
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Query: 417 GGGEGKAPVVRSKPLYDVPW 436
GGGEG+AP+ R KP+ PW
Sbjct: 231 GGGEGRAPIGRKKPV--TPW 248
>gnl|CDD|240604 cd12921, VKOR_4, Vitamin K epoxide reductase (VKOR) family in
bacteria. This family includes vitamin K epoxide
reductase (VKOR) present only in bacteria. VKOR (also
named VKORC1) is an integral membrane protein that
catalyzes the reduction of vitamin K 2,3-epoxide and
vitamin K to vitamin K hydroquinone, an essential
co-factor subsequently used in the gamma-carboxylation
of glutamic acid residues in blood coagulation enzymes.
All homologs of VKOR contain an active site CXXC motif,
which is switched between reduced and disulfide-bonded
states during the reaction cycle. In some bacterial
homologs, the VKOR domain is fused with domains of the
thioredoxin family of oxidoreductases which may function
as redox partners in initiating the reduction cascade.
This family also has a cysteine peptidase domain present
at the N-terminus of the VKOR domain.
Length = 128
Score = 31.5 bits (72), Expect = 0.36
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 104 NQDDDITKRSCGIRRKSRKAIATMAHCSIQTKVRKGKLSIFSCSAKSCIYFACMFLFL 161
+ + I K+ C I +K C+ K + K+ S S +YF + L L
Sbjct: 23 GKSNKILKKFCSIGKKV--------DCNAVLKSKGAKIGGISLSELGLLYFFGLLLLL 72
>gnl|CDD|218917 pfam06159, DUF974, Protein of unknown function (DUF974). Family of
uncharacterized eukaryotic proteins.
Length = 235
Score = 31.9 bits (73), Expect = 0.55
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 17/75 (22%)
Query: 211 EPSAH--VRSINWDPEPKQVLDKFGKRIVKAVIDNINPGLTMRAFLLP-DHYYVAFCLSG 267
EPS S+NW+P V D ++ G+ R L P D FCL
Sbjct: 148 EPSPGYKATSLNWEPSLGDV-------------DGLDGGMDKRPVLKPGDIRQYLFCLKP 194
Query: 268 IKIVRENEEY-GREV 281
+ E + GR
Sbjct: 195 KEGALEELKLDGRTN 209
>gnl|CDD|224442 COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs
[DNA replication, recombination, and repair].
Length = 192
Score = 31.4 bits (71), Expect = 0.61
Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 12/104 (11%)
Query: 6 PPVIYRKGLVKFVNSGDSITLITDPKLRTEVTFLFTNVQAPKIARRPRADGPPSAQPEDE 65
V V V GD++ + + V + AP+ A + +
Sbjct: 37 SEVELPDSTVVRVIDGDTLKVRGEGG--QAVKIRLAGIDAPETK-------QTCAGGKSQ 87
Query: 66 PYAWEAREFLRKLIIGKI---VWYTAEKPEGNRYYGTLFYPNQD 106
P EAREFLR L++G+ K R + D
Sbjct: 88 PCGEEAREFLRNLLLGRRTVECDLADRKDRYGRLLAYVTVDGTD 131
Score = 29.8 bits (67), Expect = 2.1
Identities = 30/130 (23%), Positives = 42/130 (32%), Gaps = 28/130 (21%)
Query: 359 KRRWTNYTPKKPPKERAAVVLEIINGDGLVIKYV-GDT--------KEEKVFLSSIKPPR 409
P A E+ D V++ + GDT + K+ L+ I P
Sbjct: 17 SILAQELLAAALPAFGPAKASEVELPDSTVVRVIDGDTLKVRGEGGQAVKIRLAGIDAPE 76
Query: 410 PDGAAAGGGGEGKAPVVRSKPLYDVPWLYEAREFLRTRLIG-KKVMVSEDYAQDARDKFP 468
AGG P EAREFLR L+G + V D +D++
Sbjct: 77 TKQTCAGGK--------------SQPCGEEAREFLRNLLLGRRTVECDL---ADRKDRYG 119
Query: 469 EKKCVSVFVG 478
V V
Sbjct: 120 RLLAY-VTVD 128
>gnl|CDD|216635 pfam01663, Phosphodiest, Type I phosphodiesterase / nucleotide
pyrophosphatase. This family consists of
phosphodiesterases, including human plasma-cell membrane
glycoprotein PC-1 / alkaline phosphodiesterase i /
nucleotide pyrophosphatase (nppase). These enzymes
catalyze the cleavage of phosphodiester and
phosphosulfate bonds in NAD, deoxynucleotides and
nucleotide sugars. Also in this family is ATX an
autotaxin, tumour cell motility-stimulating protein
which exhibits type I phosphodiesterases activity. The
alignment encompasses the active site. Also present with
in this family is 60-kDa Ca2+-ATPase form F. odoratum.
Length = 342
Score = 30.5 bits (69), Expect = 2.0
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Query: 229 LDKFGKRIVKAVIDNINPGLTMRAFLLPD---HYYVAFCLSGIKIVRENEEYGREVRQYL 285
+D +K ++D P L + PD H Y +R + + + L
Sbjct: 148 VDTVLTDWLKLLLDAERPDLLLVYLEEPDRVGHKYGPDSPEVEDALRRVDRAIGRLLEAL 207
Query: 286 EERILQRDVNVII------ESVQNEKNRIMNATLIHEG 317
+ER L + NVI+ V ++K +N L G
Sbjct: 208 DERGLLENTNVIVVSDHGMTPVSDDKVIFLNDLLREAG 245
>gnl|CDD|107361 cd06366, PBP1_GABAb_receptor, Ligand-binding domain of GABAb
receptors, which are metabotropic transmembrane
receptors for gamma-aminobutyric acid (GABA).
Ligand-binding domain of GABAb receptors, which are
metabotropic transmembrane receptors for
gamma-aminobutyric acid (GABA). GABA is the major
inhibitory neurotransmitter in the mammalian CNS and,
like glutamate and other transmitters, acts via both
ligand gated ion channels (GABAa receptors) and
G-protein coupled receptors (GABAb). GABAa receptors are
members of the ionotropic receptor superfamily which
includes alpha-adrenergic and glycine receptors. The
GABAb receptor is a member of a receptor superfamily
which includes the mGlu receptors. The GABAb receptor is
coupled to G alpha_i proteins, and activation causes a
decrease in calcium, an increase in potassium membrane
conductance, and inhibition of cAMP formation. The
response is thus inhibitory and leads to
hyperpolarization and decreased neurotransmitter
release, for example.
Length = 350
Score = 29.9 bits (68), Expect = 2.8
Identities = 4/28 (14%), Positives = 13/28 (46%)
Query: 270 IVRENEEYGREVRQYLEERILQRDVNVI 297
+ E+++YG L + + + + +
Sbjct: 140 TIYEDDDYGSGGLPDLVDALQEAGIEIS 167
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase.
Length = 667
Score = 30.1 bits (68), Expect = 3.4
Identities = 10/52 (19%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 204 GKYSTRDEPSAHVRSINW--DPEPKQVLDKFGKRI--VKAVIDNINPGLTMR 251
++++ + +W D EP +FGK++ ++ I N L+++
Sbjct: 600 SRHASDEVYLGQRDEEHWTSDKEPLAAFKRFGKKLAEIEKKITERNKDLSLK 651
>gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase.
Length = 1036
Score = 29.8 bits (67), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 344 EKKLREAEKLAQSERKRRWTNYTPKKPPKERAA 376
E+K RE EKLA+ E +R ++ +E+AA
Sbjct: 252 EEKRRELEKLAKEEAERERQAEEQRRREEEKAA 284
>gnl|CDD|147581 pfam05475, Chlam_vir, Chlamydia virulence protein PGP3-D. This
family consists of Chlamydia virulence proteins which
are thought to be required for growth within mammalian
cells.
Length = 264
Score = 29.1 bits (65), Expect = 4.7
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 207 STRDEPSAHVRSINWDPEPKQVLDKFGKRIVKAVIDNI 244
ST ++ S++ + K +L + +VK +I NI
Sbjct: 59 STPSTNASITFSLDMEAVIKLILTQIEDELVKDIIKNI 96
>gnl|CDD|232828 TIGR00110, ilvD, dihydroxy-acid dehydratase. This protein,
dihydroxy-acid dehydratase, catalyzes the fourth step in
valine and isoleucine biosynthesis. It contains a
catalytically essential [4Fe-4S] cluster This model
generates scores of up to 150 bits vs.
6-phosphogluconate dehydratase, a homologous enzyme
[Amino acid biosynthesis, Pyruvate family].
Length = 535
Score = 29.3 bits (66), Expect = 4.8
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 222 DPEPKQVLDKFGKRIVKAVIDNINPG--LTMRAF 253
E K++ GKRIV+ V NI P LT AF
Sbjct: 202 SAEKKRIAKNSGKRIVELVKKNIKPRDILTKEAF 235
>gnl|CDD|161803 TIGR00283, arch_pth2, peptidyl-tRNA hydrolase. This model
describes an archaeal/eukaryotic form of peptidyl-tRNA
hydrolase. Most bacterial forms are described by
TIGR00447 [Protein synthesis, Other].
Length = 115
Score = 27.9 bits (62), Expect = 4.8
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 135 KVRKGKLSIFSCSAKSCIYFACMFLFLRTEFPPTDDDITKLLISEGWVSLRSKNPD---L 191
+ KGK++ C A + FL+++ + + + + EG + K L
Sbjct: 12 GMGKGKIAAQVCHA-------AIIGFLKSK--RKNPSLRRKWLDEGQKKVVLKVNSLEEL 62
Query: 192 LDLENKAKEAGKGKYSTRDE-----PSAHVRSINWDPEPKQVLDK 231
L++ +KA+ G RD P + ++ P+ + +DK
Sbjct: 63 LEIYHKAESLGLVTGLIRDAGHTQIPPGTITAVGIGPDEDEKIDK 107
>gnl|CDD|199212 cd10914, Peptidase_C25_N_1, uncharacterized subgroup of the
Peptidase C25 family N-terminal domain. Domains in this
subgroup are uncharacterized members of the Peptidase
family C25 N-terminal domain family. Peptidase family
C25 is a unique class of cysteine proteases, exemplified
by gingipain, which is produced by Porphyromonas
gingivalis. P. gingivalis is one of the primary
gram-negative pathogens that causes periodontitis, a
disease that is also associated with other diseases such
as diabetes and cardiovascular disease. Gingipains are a
group of extracellular Arg- and Lys-specific proteinases
called Arg-gingipain (Rgp) and Lys-gingipain (Kgp); RgpA
and RgpB are homologous Arg-specific gingipains encoded
by two closely related genes, rgpA and rgpB, while
Lys-specific gingipain is encoded by the single kgp gene
(also called prtK, prkP). Mutant studies have shown
that, among the large quantities of proteolytic enzymes
produced by P. gingivalis, these three proteases are
major virulence factors of this bacterium. All three
genes encode an N-terminal pre-pro fragment, followed by
the protease domain; however, rgpA and kgp also encode
additional C-terminal HA (hemaglutinin/adhesion)
subunits which consist of several sequence-related
adhesion domains. Although unique, their cysteine
protease active site residues (His and Cys) forming the
catalytic dyad are well-conserved, cleaving the
C-terminal peptide bond with Arg or Lys residues.
Gingipains are evolutionarily related to other highly
specific proteases including caspases, clostripain,
legumains, and separase. Gingipains function by
dysregulating host defense and inflammatory responses,
and degrading host proteins, e.g. tissue, cells, matrix,
plasma and immunological proteins. They are proposed to
enhance gingival crevicular fluid (GCF) production
through activation of the kallikrein/kinin pathways,
thus increasing vascular permeability and causing
gingival inflammation, a distinctive feature of
periodontitis. RgpA and RgpB are also able to cleave and
activate coagulation factors IX and X in order to
activate prothrombin to produce thrombin, which in turn
increases production of GCF. The gingipains also play a
pivotal role in the survival of P. gingivalis in the
host by attacking the host defense system through
cleavage of several immunological molecules, while at
the same time evading the host-immune response by
dysregulating the cytokine network.
Length = 365
Score = 28.6 bits (64), Expect = 6.9
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 349 EAEKLAQSERKRRWTNYTPKKPPKERA--AVVLEIINGDGLVIKYVG 393
+ L S+ + YTP P RA +L +N ++ YVG
Sbjct: 186 QIAGLLPSQTTIKRAYYTPIGPAAARALAQELLAALNQGAELVHYVG 232
>gnl|CDD|110081 pfam01054, MMTV_SAg, Mouse mammary tumour virus superantigen. The
mouse mammary tumour virus (MMTV) is a milk-transmitted
type B retrovirus. The superantigen (SAg) is encoded by
the long terminal repeat. The SAgs are also called PR73.
Length = 314
Score = 28.8 bits (64), Expect = 7.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 199 KEAGKGKYSTRDEPSAHVR 217
EA KG + T+D+PSAH R
Sbjct: 19 GEAAKGLFPTKDDPSAHTR 37
>gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton].
Length = 3164
Score = 28.8 bits (64), Expect = 8.0
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 226 KQVLDKFGKRIVKAVIDNINPGLTMRAFLLPDHYYVAFCLSGIKIVRENEEYGREVRQYL 285
VL K GK + A +D++ H+Y SGI + E+ V
Sbjct: 208 CDVLRKSGKYVTVATLDSLLSSSKYSELGRRLHFYANMDFSGIYFPKSFSEFKDSVISAT 267
Query: 286 E---------ERILQRDVNVIIESV-QNEKNRI 308
+ R+ +R + V ++S+ + +RI
Sbjct: 268 QAVSRDIGRQSRMARRLILVQMDSLARLIVDRI 300
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 28.5 bits (64), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 370 PPKERAAVVLEIINGDGLVIKYV 392
P E A +V+E I GDG +++ V
Sbjct: 204 PADEVACIVIETIQGDGGLLEPV 226
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.137 0.405
Gapped
Lambda K H
0.267 0.0754 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 25,246,931
Number of extensions: 2533238
Number of successful extensions: 2484
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2472
Number of HSP's successfully gapped: 39
Length of query: 480
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 379
Effective length of database: 6,457,848
Effective search space: 2447524392
Effective search space used: 2447524392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (27.2 bits)