BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16184
(363 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 234/376 (62%), Positives = 279/376 (74%), Gaps = 41/376 (10%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LP NLL LFAPRDP+PYLPPV KL HEKK GYSG+ +F++ FEDPKDTPPPT +E
Sbjct: 1 MTQYLPHNLLTLFAPRDPIPYLPPVSKLSHEKKNRGYSGVGSFMDLFEDPKDTPPPTTIE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T+E++LERRRRE+AEQVAYKLEQEIA W+P+S NA DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TKEDKLERRRREKAEQVAYKLEQEIAAWNPHSDANAVTDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE+YG IKKIV+ NK+ GKPRGYAFIEYE+ERDM+SAYK+ADGKKIDGRRVLVDVER+
Sbjct: 121 EFELYGLIKKIVVTRNKIDGKPRGYAFIEYENERDMYSAYKYADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSG 240
RTVKGWLPRRLGGGLGGTRRGGP+VNL HSGREDNERERERY A + S
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPEVNLIHSGREDNERERERY--------ARKMLISYSR 232
Query: 241 SNDRERERE-------------RRRSRSRERKRRTSRSRSRDRRRRRSRER----IRDDD 283
+ +R RER+ R RSR ERK S+S SR RSR+R + D+
Sbjct: 233 TTERNRERDYYDRDGDREREPRRPRSRDHERKHHCSKSGSRKLHICRSRDRGPRDVEYDE 292
Query: 284 IEEVEFRPKDRSDRDRDRDRKRRRERENSEDRNERKRDRKERRKER-----------ERN 332
+EEV RD+D DRKR+R+R +S D ER+++RKER R ++N
Sbjct: 293 VEEV----LGSKPRDKDPDRKRKRKRSHSRD-CERRKNRKERDHYRRDKSKDRCEKYDKN 347
Query: 333 NEEREEKVFIKQEPVD 348
N ER++K+ IK+EPVD
Sbjct: 348 NSERDDKIHIKEEPVD 363
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/211 (88%), Positives = 199/211 (94%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPPV KLPHEKK+ GY G+ AFLN FEDPKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVNKLPHEKKSAGYVGLGAFLNNFEDPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRER EQVAYKLEQEIA+WDP S PN T+DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERNEQVAYKLEQEIAVWDPASIPNVTVDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNSINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 188/210 (89%), Positives = 201/210 (95%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPPV KLPHEKK+ GY G+ AFL EFEDPKDTPPPTRVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVAKLPHEKKSRGYLGVGAFLKEFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ERRRRERAEQVAYKLEQEIA+WDPNS PN T+DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERRRRERAEQVAYKLEQEIAVWDPNSAPNITVDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGPIKKIV++HN V GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPIKKIVLIHNSVNGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHS 210
RTVKGWLPRRLGGGLGGTRRGGP+VN+KHS
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPEVNIKHS 210
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 206/222 (92%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+PYLPP +KLPHEK Y+G++ +LN FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ER+RRE+AEQVAYKLEQ+IALWDP + + T+DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEV+GPIKKIV+VHNK+TGKPRGYAF+EYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 EFEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERY 222
RTVKGWLPRRLGGGLGGTRRGGPDVN KHSGRED+ R ERY
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGREDS-RMDERY 221
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 183/211 (86%), Positives = 201/211 (95%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDPVPYLPPV KLPHEKKT GY G+ +F++ FEDP+DTPPPT++E
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPVAKLPHEKKTRGYLGVGSFMDLFEDPEDTPPPTKIE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRE+AEQVAYKLEQEIALW+P+S NAT DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRREKAEQVAYKLEQEIALWEPHSVANATTDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE+YGPIKKIV+ HNK+ GKPRGYAFIEYE+ERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFELYGPIKKIVVTHNKIDGKPRGYAFIEYEYERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGP+VNLKHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPEVNLKHSG 211
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/211 (87%), Positives = 195/211 (92%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPPV KLPHEKK GY G+ FL FEDPKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP PN T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/211 (87%), Positives = 195/211 (92%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPPV KLPHEKK GY G+ FL FEDPKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP PN T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 181/211 (85%), Positives = 193/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPP KLPHEKK GY G+ FL FEDPKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPASKLPHEKKNSGYIGVGGFLKYFEDPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP N T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPR+LGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRKLGGGLGGTRRGGPDVNIKHSG 211
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/211 (86%), Positives = 195/211 (92%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPPV KLPHEKK GY G+ FL FE+PKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEEPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP PN T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|242003896|ref|XP_002422903.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
Length = 309
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 182/211 (86%), Positives = 197/211 (93%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+P+LPP +KLPHEKK GY G+ AF+ FEDPKDTPPPTRVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPPPDKLPHEKKNRGYQGVGAFIKYFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRERAEQVAYKLEQEIA+WDP++ P AT DPFKTLF+AR+NYDTSE KLRR
Sbjct: 61 TRDERLERRRRERAEQVAYKLEQEIAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGPIKKIV+ HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPIKKIVVSHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/211 (86%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPPV KLPHEKK GY G+ FL FEDPKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP N T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGILNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|332017705|gb|EGI58383.1| U1 small nuclear ribonucleoprotein 70 kDa [Acromyrmex echinatior]
Length = 405
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/211 (85%), Positives = 193/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALF+PR+P+PYLPP KLPHEKK GY+G+ FL FEDPKDTPPP RVE
Sbjct: 1 MTQFLPPNLLALFSPREPIPYLPPASKLPHEKKNGGYTGVGIFLKYFEDPKDTPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP N T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV+ HN + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVTHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|307193764|gb|EFN76445.1| U1 small nuclear ribonucleoprotein 70 kDa [Harpegnathos saltator]
Length = 239
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/211 (86%), Positives = 193/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPP KLPHEKK GY G+ FL FEDPK+TPPP RVE
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPANKLPHEKKVGGYIGVGTFLKYFEDPKETPPPVRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQVAYKLEQEIA+WDP N T DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGP+KKIV++HN V GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER+
Sbjct: 121 EFEVYGPVKKIVVIHNTVNGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 185/249 (74%), Positives = 206/249 (82%), Gaps = 28/249 (11%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+PYLPP +KLPHEK Y+G++ +LN FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ER+RRE+AEQVAYKLEQ+IALWDP + + T+DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS---------------------- 158
EFEV+GPIKKIV+VHNK+TGKPRGYAF+EYEHERDMHS
Sbjct: 121 EFEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 180
Query: 159 -----AYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
AYKHADGKKIDGRRVLVDVER RTVKGWLPRRLGGGLGGTRRGGPDVN KHSGRE
Sbjct: 181 XVLSAAYKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRE 240
Query: 214 DNERERERY 222
D+ R ERY
Sbjct: 241 DS-RMDERY 248
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 178/215 (82%), Positives = 200/215 (93%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPR+P+PYLPP +KLPHEK Y+G+ +L+ FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPREPIPYLPPTDKLPHEKTPGTYTGVGKYLSLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ER+RRE+AEQVAYKLEQ+IALW+P++ T+DPFKTLF+ARVNYDTSESKLRR
Sbjct: 61 TREERVERKRREKAEQVAYKLEQDIALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEV+G IKKIV+VHNK+TGKPRGYAF+EYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 EFEVFGSIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVKGWLPRRLGGGLGGTRRGGPDVN KHSGRED+
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGREDS 215
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/211 (84%), Positives = 197/211 (93%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LP NLLALFAPRDP+PYLPP +KLPHEKK+ GY G+ AFL+ FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPSNLLALFAPRDPIPYLPPPDKLPHEKKSQGYLGVGAFLDCFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ERRRRERAEQVAYKLE+EIA WDPN AT DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERVERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE+YG IKKI+M+++K TGKPRGYAFIEYEHERDMH+AYKHADGKKIDG+RVLVDVER+
Sbjct: 121 EFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/211 (84%), Positives = 198/211 (93%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+PYLPP +KLPHEKK+ GY G+ +FL+ FEDPKDTPPPTRVE
Sbjct: 131 MTQYLPPNLLALFAPRDPIPYLPPPDKLPHEKKSRGYLGVGSFLDGFEDPKDTPPPTRVE 190
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ERRRRERAEQVAYKLE+EIA WDPN AT DPFKTLFIAR+NYDTSESKLRR
Sbjct: 191 TREERIERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFIARINYDTSESKLRR 250
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE+YG IKKI+M+++K +GKPRGYAFIEYEHERDMH+AYKHADGKKIDG+RVLVDVER+
Sbjct: 251 EFEMYGNIKKIIMINDKNSGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVLVDVERA 310
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGGPDVN+KHSG
Sbjct: 311 RTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 341
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 196/211 (92%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+++FEDPKDTPPP VE
Sbjct: 1 MTQYLPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVANFMSDFEDPKDTPPPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLF+AR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195387576|ref|XP_002052470.1| GJ21434 [Drosophila virilis]
gi|194148927|gb|EDW64625.1| GJ21434 [Drosophila virilis]
Length = 454
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 195/211 (92%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+++FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVAKFMSDFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQDSGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|194862752|ref|XP_001970105.1| GG23559 [Drosophila erecta]
gi|190661972|gb|EDV59164.1| GG23559 [Drosophila erecta]
Length = 448
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195471605|ref|XP_002088093.1| GE18384 [Drosophila yakuba]
gi|194174194|gb|EDW87805.1| GE18384 [Drosophila yakuba]
Length = 448
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/222 (72%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRL G G + G DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLEPGAPGLKSGHADVNIRHSGRDDTSRYDER 222
>gi|195577191|ref|XP_002078456.1| GD22521 [Drosophila simulans]
gi|194190465|gb|EDX04041.1| GD22521 [Drosophila simulans]
Length = 348
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA R+P+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVANFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195050851|ref|XP_001992981.1| GH13577 [Drosophila grimshawi]
gi|193900040|gb|EDV98906.1| GH13577 [Drosophila grimshawi]
Length = 465
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/210 (80%), Positives = 194/210 (92%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+++FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVAKFMDDFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQDSGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHS 210
RTVKGWLPRRLGGGLGGTRRGG DVN+KHS
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHS 210
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+ +FEDP+DTP P VE
Sbjct: 1 MTQYLPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAHFMTDFEDPEDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA R+P+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
[Drosophila melanogaster]
Length = 448
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA R+P+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195338817|ref|XP_002036020.1| GM13669 [Drosophila sechellia]
gi|194129900|gb|EDW51943.1| GM13669 [Drosophila sechellia]
Length = 448
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 194/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA R+P+P++PPV+KLPHEKK+ GY G+A F+ +FEDPKDTP P VE
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP NAT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/211 (79%), Positives = 193/211 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFA R+P+P++PPV+KLPHEKK+ GY G+A F+ +FEDP+DTP P VE
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVANFMADFEDPQDTPLPKTVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ERLERRRRE+AEQVAYKLE+EIALWDP AT DPF+TLFIAR+NYDTSESKLRR
Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKMATEDPFRTLFIARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKIV++H++ +GKP+GYAFIEYEHERDMH+AYKHADGKKID +RVLVDVER+
Sbjct: 121 EFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|410905871|ref|XP_003966415.1| PREDICTED: uncharacterized protein LOC101066791 [Takifugu rubripes]
Length = 467
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/222 (75%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK YSGIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLVKLPHEKHHNQPYSGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETR+ERLER+RRE+ E+ LE E+ LWDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETRDERLERKRREKIERRQTVLETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I +V++K T KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYIVYSKRTAKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN+KHSGR+D R +R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDASRYDDR 222
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 180/214 (84%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPR+P+ YLPP++KLP EK+T GYSGI++++ FEDP DTPPP R E
Sbjct: 1 MTQYLPPNLLALFAPREPIRYLPPLDKLPEEKRTDGYSGISSYVQLFEDPADTPPPARGE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREE+ R+ +E+ E KLE E+ WD +S +AT + FKTLFIARVNYDT+ESKLRR
Sbjct: 61 TREEKRLRKMKEKEEMCKQKLENEVEEWDAHSNASATSNAFKTLFIARVNYDTTESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIK I + H+ TGKP+GYAFIEY HERDMHSAYK+ADGKKID RRVLVDVER+
Sbjct: 121 EFESYGPIKMISIAHDINTGKPKGYAFIEYAHERDMHSAYKYADGKKIDSRRVLVDVERA 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
RTVKGW PRRLGGGLGGTRRGGPDVN +HSGR+D
Sbjct: 181 RTVKGWTPRRLGGGLGGTRRGGPDVNSRHSGRDD 214
>gi|357627216|gb|EHJ76977.1| hypothetical protein KGM_19833 [Danaus plexippus]
Length = 392
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 190/235 (80%), Gaps = 24/235 (10%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFA RDP+PYLPP KLPHEKK GY G+ AFLN FE P +TPPPTRVE
Sbjct: 1 MTQFLPPNLLALFAARDPIPYLPPAAKLPHEKKQKGYDGVGAFLNVFEHPSETPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREERLERRRRERAEQ AYKLEQEIALWDP + AT DPFKTLF+ARVNYDTSESKLRR
Sbjct: 61 TREERLERRRRERAEQTAYKLEQEIALWDPTTNAKATGDPFKTLFVARVNYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH----------------------- 157
EFE YGPIKKI MV++K GKPRGYAFIEYEHERDMH
Sbjct: 121 EFEGYGPIKKIHMVYSKENGKPRGYAFIEYEHERDMHSAQAASASALLQEGRSQRPRSAI 180
Query: 158 -SAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
+AYKHADGKKIDG+RVLVDVER+RTVKGWLPRRLGGGLGGTRRGG DVN+KHSG
Sbjct: 181 VTAYKHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGADVNIKHSG 235
>gi|432871355|ref|XP_004071924.1| PREDICTED: uncharacterized protein LOC101174750 [Oryzias latipes]
Length = 469
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/222 (77%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP +EKLPHEK YSGIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYSGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREERLER+RRE+ E+ ++E E+ LWDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERLERKRREKIERRQGEVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I +V+NK TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYIVYNKGTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGWLPRRLGGGLGGTRRGG DVN+KHSGR+D R +R
Sbjct: 181 GRTVKGWLPRRLGGGLGGTRRGGADVNIKHSGRDDASRYDDR 222
>gi|156371745|ref|XP_001628922.1| predicted protein [Nematostella vectensis]
gi|156215911|gb|EDO36859.1| predicted protein [Nematostella vectensis]
Length = 245
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/218 (72%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHG-YSGIAAFLNEFEDPKDTPPPTRV 59
MTQ+LPPNLLALFAPRDP+P+ PP++K KKT YSG+ +FL+ FEDPKDTP PT
Sbjct: 1 MTQYLPPNLLALFAPRDPLPFAPPLDKPSWLKKTPWLYSGVGSFLHVFEDPKDTPDPTFG 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREE++ER+RRE+ E+VA +LE++I WDP + PNA D FKTLFI R+NYDTSESKLR
Sbjct: 61 ETREEKIERKRREKQERVAQELEEKIGSWDPQTDPNAYGDAFKTLFIGRINYDTSESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
RE E+YGPIK I MV+N KPRGYAFIEYEHERDMH+AYKHADGKKIDGRR++VDVER
Sbjct: 121 REMEMYGPIKHISMVYNSKASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
RTVK W PRRLGGGLGGTR GGPD N+KHSGR D+ER
Sbjct: 181 GRTVKSWRPRRLGGGLGGTRCGGPDQNVKHSGRVDSER 218
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 178 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 237
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 238 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 297
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 298 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 357
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 358 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 399
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT +LPPNLLALFA RDP+P+ P+E+ P + Y+GIA ++ FEDP +TP P +VE
Sbjct: 6 MTAYLPPNLLALFAARDPIPFAIPIER-PKHHRPLPYTGIAQYVKLFEDPSETPIPPKVE 64
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREE+ ER+R+E+AEQ+AYK+EQ++ALW+PN P+ T DP+KTLF+AR+NYDT+E+K+RR
Sbjct: 65 TREEKRERKRKEKAEQIAYKVEQDLALWNPNEIPSGTKDPYKTLFVARINYDTTENKIRR 124
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIK I MV N + KPRGY FIEYEHERDMH+AYK+ADGKKIDG RVLVDVER+
Sbjct: 125 EFEGYGPIKTIRMVKNAMNNKPRGYCFIEYEHERDMHAAYKNADGKKIDGHRVLVDVERA 184
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
RTV+ W PRRLGGGLG TRRG P+ N K++ RE+
Sbjct: 185 RTVRNWRPRRLGGGLGNTRRGPPEQNSKYTTREE 218
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 138 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAXYIREFEDPRDAPPPTRA 197
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 198 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 257
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 258 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 317
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 318 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 359
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK YSGIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYSGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVESELKMWDPHNDTNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV+NK +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYMVYNKHSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 216
>gi|119572837|gb|EAW52452.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_g [Homo sapiens]
Length = 395
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/260 (63%), Positives = 189/260 (72%), Gaps = 39/260 (15%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRL------------------GGGLGGT-------------RRGGP----- 203
RTVKGW PRRL G GLG RG P
Sbjct: 181 GRTVKGWRPRRLVLVESLCFGVLGAKWLGVGPGLGAVVLPSKHACEGPTPARGAPHFPCL 240
Query: 204 --DVNLKHSGREDNERERER 221
DVN++HSGR+D R ER
Sbjct: 241 SADVNIRHSGRDDTSRYDER 260
>gi|440906344|gb|ELR56614.1| U1 small nuclear ribonucleoprotein 70 kDa, partial [Bos grunniens
mutus]
Length = 222
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|149055933|gb|EDM07364.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_c [Rattus norvegicus]
gi|187469313|gb|AAI67051.1| Snrp70 protein [Rattus norvegicus]
Length = 451
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
gi|83305641|sp|Q62376.2|RU17_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|74144840|dbj|BAE27392.1| unnamed protein product [Mus musculus]
gi|74221620|dbj|BAE21515.1| unnamed protein product [Mus musculus]
gi|124297316|gb|AAI32021.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|124298068|gb|AAI31995.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|148690898|gb|EDL22845.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
gi|148690901|gb|EDL22848.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
Length = 448
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|355756025|gb|EHH59772.1| hypothetical protein EGM_09962 [Macaca fascicularis]
Length = 255
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|354493110|ref|XP_003508687.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Cricetulus griseus]
gi|344247885|gb|EGW03989.1| U1 small nuclear ribonucleoprotein 70 kDa [Cricetulus griseus]
Length = 445
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|348538876|ref|XP_003456916.1| PREDICTED: hypothetical protein LOC100701048 [Oreochromis
niloticus]
Length = 470
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 170/222 (76%), Positives = 190/222 (85%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK YSGIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLVKLPHEKHHNQPYSGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREERLER+RRE+ E+ +E E+ LWDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERLERKRREKIERRQAVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I +V+NK TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN+KHSGR+D R +R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDASRYDDR 222
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|343961429|dbj|BAK62304.1| U1 small nuclear ribonucleoprotein 70 kDa [Pan troglodytes]
Length = 251
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|74140671|dbj|BAB29263.3| unnamed protein product [Mus musculus]
gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Length = 248
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|344270065|ref|XP_003406866.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Loxodonta africana]
Length = 229
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|426244049|ref|XP_004015848.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Ovis aries]
Length = 340
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 172/236 (72%), Positives = 197/236 (83%), Gaps = 1/236 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPP 235
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER + GPP
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPAGDAPPDDGPP 236
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 194/227 (85%), Gaps = 1/227 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDSNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLER 226
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER+ R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERWVTAR 227
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSR 218
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/215 (74%), Positives = 185/215 (86%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALF RDP+P+L P+ KLPHEK+ Y G+ F+ FEDP +TPP RVE
Sbjct: 1 MTQFLPPNLLALFKARDPIPFLHPIGKLPHEKQQETYIGVGTFIRYFEDPSETPPAMRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER ERR++E+AE+ AY+LEQ IALWDPN+ P AT DPFKTLFIAR+NY+TSE KLRR
Sbjct: 61 TREERRERRKKEKAEETAYQLEQAIALWDPNNNPKATADPFKTLFIARINYETSEGKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YG IK++ ++H+ ++ KPRGYAFIEY HERDMH+AYKHADGKKID RRVLVDVER
Sbjct: 121 EFEQYGAIKQVSLIHSSISNKPRGYAFIEYAHERDMHAAYKHADGKKIDSRRVLVDVERG 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVKGWLPRRLGGGLGGTRRGGPDVN++HSGREDN
Sbjct: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNVRHSGREDN 215
>gi|351703349|gb|EHB06268.1| U1 small nuclear ribonucleoprotein 70 kDa [Heterocephalus glaber]
Length = 431
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|431920778|gb|ELK18551.1| U1 small nuclear ribonucleoprotein 70 kDa [Pteropus alecto]
Length = 423
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDPVPYLPP++KLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ +E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV+NK +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSR 218
>gi|383420989|gb|AFH33708.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 216
>gi|158259701|dbj|BAF85809.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/222 (75%), Positives = 192/222 (86%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RR++ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRRKKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I V++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHTVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|225734047|pdb|3CW1|K Chain K, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734056|pdb|3CW1|6 Chain 6, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734065|pdb|3CW1|7 Chain 7, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734074|pdb|3CW1|8 Chain 8, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 216
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 216
>gi|297277576|ref|XP_002801385.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Macaca mulatta]
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen [Homo sapiens]
gi|119572835|gb|EAW52450.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_e [Homo sapiens]
gi|380815838|gb|AFE79793.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384948960|gb|AFI38085.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 216
>gi|148225156|ref|NP_001081603.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus laevis]
gi|80479195|gb|AAI08448.1| LOC397946 protein [Xenopus laevis]
Length = 471
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 189/221 (85%), Gaps = 4/221 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDPVPYLPP++KLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ +E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVT---GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
REFEVYGPIK+I +V+NK + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD
Sbjct: 121 REFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 180
Query: 177 VERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
VER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R
Sbjct: 181 VERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSR 221
>gi|134091|sp|P09406.1|RU17_XENLA RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|65179|emb|CAA30972.1| U1 70K [Xenopus laevis]
Length = 471
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 189/221 (85%), Gaps = 4/221 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDPVPYLPP++KLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ +E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVT---GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
REFEVYGPIK+I +V+NK + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD
Sbjct: 121 REFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 180
Query: 177 VERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
VER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R
Sbjct: 181 VERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSR 221
>gi|51468002|ref|NP_001003875.1| U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
gi|49619089|gb|AAT68129.1| U1 small ribonucleoprotein 70kd [Danio rerio]
Length = 495
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 167/222 (75%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK Y GIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREERLER+RRE+ E+ +E E+ LWDP++ NA D FKTLF+AR+NYDT+ESKLR
Sbjct: 61 ETREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I +V+NK TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN+KHSGR+D R +R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDR 222
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/223 (62%), Positives = 172/223 (77%), Gaps = 8/223 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPKDTPPPTR 58
MTQFLPPNLLALFAPRD +PY P++ L EK + Y+G+ F + FEDPKDTPPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDAIPYKAPLQPLTWEKDRERAPYTGLGNFSHLFEDPKDTPPPTR 60
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
ET+EE+ R+ +E+ E+ A ++E+EI WDP++ PNA D FKTLF++R+NYDT+ESKL
Sbjct: 61 GETKEEKKTRKIKEKLEKRAEEIEEEIKGWDPHNDPNAGGDAFKTLFVSRINYDTTESKL 120
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RREFE YG I+K+ +V + TGKPRGYAF+E++ ERDMH+AYK ADGKKIDGRRVLVDVE
Sbjct: 121 RREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDMHTAYKSADGKKIDGRRVLVDVE 180
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
R RTVKGW PRR GGGLG TR G D N + +ERE+ER
Sbjct: 181 RGRTVKGWRPRRFGGGLGSTRAGPDDSNRR------SEREKER 217
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/222 (74%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK Y GIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREERLER+RRE+ E+ +E E+ LWDP++ NA D FKTLF+AR+NYDT+ESKLR
Sbjct: 61 ETREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I +V+NK TG+PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYIVYNKKTGRPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN+KHSGR+D R +R
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDR 222
>gi|66910786|gb|AAH97714.1| LOC397946 protein [Xenopus laevis]
Length = 351
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 189/221 (85%), Gaps = 4/221 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDPVPYLPP++KLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ +E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVT---GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
REFEVYGPIK+I +V+NK + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD
Sbjct: 121 REFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 180
Query: 177 VERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
VER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R
Sbjct: 181 VERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSR 221
>gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404), partial [Xenopus laevis]
Length = 267
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 189/221 (85%), Gaps = 4/221 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDPVPYLPP++KLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ +E E+ +WDP++ NA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVT---GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
REFEVYGPIK+I +V+NK + GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD
Sbjct: 121 REFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 180
Query: 177 VERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
VER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R
Sbjct: 181 VERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSR 221
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/309 (58%), Positives = 214/309 (69%), Gaps = 30/309 (9%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+PYLPP+ KL EKK YSG+A F++EFE+P DTPPP +VE
Sbjct: 1 MTQFLPPNLLALFAPRDPLPYLPPIAKLSFEKKRAPYSGVAKFIHEFENPNDTPPPVKVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ER+RRERAE YK+EQ IA W+P++ A+ DPFKTLF+AR++YDT+E+KLRR
Sbjct: 61 TREERIERKRRERAELQNYKIEQGIATWNPSANDKASTDPFKTLFVARLSYDTTETKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEVYGPIKKI M+ + +TGK RGYAFIEYEHE DMH+AYKHADGKKID RRVLVDVER
Sbjct: 121 EFEVYGPIKKIYMITDIITGKSRGYAFIEYEHEADMHAAYKHADGKKIDKRRVLVDVERG 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDV-NLKHSGREDNERERERYRLERERELAGGPPRARS 239
RTVK WLPRRLGGGLG TRR P ++ H +D++R S
Sbjct: 181 RTVKNWLPRRLGGGLGNTRRDRPPAGSISH---DDDDR------------------MMYS 219
Query: 240 GSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDR 299
S DR R+R+ RE R RS SRDR R R RDD + D R
Sbjct: 220 SSGDRYRDRDYD---GREYDRSRRRSHSRDRERGDRGRRDRDDYRDGRG-----GGDYYR 271
Query: 300 DRDRKRRRE 308
+RDR+ R +
Sbjct: 272 NRDREFRAD 280
>gi|410982448|ref|XP_003997569.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Felis catus]
Length = 438
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/222 (73%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMH Y DGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHCEYLWPDGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 181 GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 222
>gi|108742141|gb|AAI17603.1| Snrnp70 protein [Danio rerio]
Length = 339
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/196 (73%), Positives = 163/196 (83%), Gaps = 1/196 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK Y GIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREERLER+RRE+ E+ +E E+ LWDP++ NA D FKTLF+AR+NYDT+ESKLR
Sbjct: 61 ETREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I +V+NK TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Sbjct: 121 REFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
Query: 180 SRTVKGWLPRRLGGGL 195
RTVKGW P L G L
Sbjct: 181 GRTVKGWRPGDLVGVL 196
>gi|291222252|ref|XP_002731131.1| PREDICTED: small nuclear ribonucleoprotein 70kDa polypeptide (RNP
antigen)-like, partial [Saccoglossus kowalevskii]
Length = 402
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Query: 49 DPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIAR 108
DPKDTPPPTRVET+EERLER+R+E+ E++A ++++E WDPN+ P D FKTLF+AR
Sbjct: 1 DPKDTPPPTRVETKEERLERKRKEKNEEIAQRIQEECGSWDPNANPRFG-DAFKTLFVAR 59
Query: 109 VNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKI 168
+NYDTSESKLRREFE YGPI I MV + TGKPRGYAFIEYEHERDMHSAYK+ADGKKI
Sbjct: 60 INYDTSESKLRREFESYGPINSIRMVQSVETGKPRGYAFIEYEHERDMHSAYKYADGKKI 119
Query: 169 DGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
DGRRVLVDVER+RTVKGWLPRRLGGGLG TR+GG DVN++HSGRED
Sbjct: 120 DGRRVLVDVERARTVKGWLPRRLGGGLGSTRKGGADVNIRHSGRED 165
>gi|395751523|ref|XP_002829587.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Pongo abelii]
Length = 624
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/184 (75%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 126 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 185
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 186 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 245
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV+VER
Sbjct: 246 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVEVER 305
Query: 180 SRTV 183
RTV
Sbjct: 306 GRTV 309
>gi|392495108|gb|AFM74217.1| U1 small nuclear ribonucleoprotein 70 kD [Spirometra
erinaceieuropaei]
Length = 297
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+P+LPP+EK H +K Y+G+A FL EFEDP +TP P R+E
Sbjct: 1 MTQYLPPNLLALFAPRDPIPFLPPIEKHKHHRKLP-YTGVAQFLGEFEDPSETPAPARIE 59
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER ER+RRE+ EQ YKLEQ++ALW+P PNAT +P+ TLF+AR+NYDTSE KLRR
Sbjct: 60 TREERKERKRREKQEQANYKLEQDLALWNPKKNPNATGNPYNTLFVARLNYDTSEHKLRR 119
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF+VYGPIK+I M+ + TGKPRGYAFIE+EHERDMH+A K A+ +KIDG R+L D+ER
Sbjct: 120 EFDVYGPIKRISMIKDIATGKPRGYAFIEFEHERDMHAANKDANNRKIDGHRILTDIERG 179
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPD 204
RT W PRRLG GLG +R G D
Sbjct: 180 RTRPDWRPRRLGKGLGKSRSGPSD 203
>gi|427781317|gb|JAA56110.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Rhipicephalus pulchellus]
Length = 201
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 155/180 (86%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+PYLPP +KLPHEK Y+G++ +LN FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ER+RRE+AEQVAYKLEQ+IALWDP + + T+DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFEV+GPIKKIV+VHNK+TGKPRGYAF+EYEHERDMH Y A + VL+ +E +
Sbjct: 121 EFEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHCEYLWAITPFLICLDVLLFIETN 180
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 176/221 (79%), Gaps = 1/221 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT FLPPNLLALFAPR+P+ YLPP ++ P EKK Y G++ L +FEDP+DTP PTR E
Sbjct: 1 MTAFLPPNLLALFAPREPLLYLPPTDQRPWEKKPWPYDGVSQCLGDFEDPQDTPEPTRGE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TR+ER R+R+ER E+ KLE EI WDP++ + DPFKTLF+ R+N+DTSE KLRR
Sbjct: 61 TRDERRARKRKERDERYRLKLESEIETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGP+K+I +V + +GKPRGYAF+EYE+ERDMHSAYK+ADGKKIDG+RV+VDVER
Sbjct: 121 EFESYGPVKRINIVSDPKSGKPRGYAFVEYENERDMHSAYKYADGKKIDGKRVVVDVERG 180
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTVK W PRRLGGGLGGTR+G P +K+SGR D ERE E+
Sbjct: 181 RTVKSWKPRRLGGGLGGTRKGAPHECIKYSGRVD-ERENEK 220
>gi|341897322|gb|EGT53257.1| CBN-RNP-7 protein [Caenorhabditis brenneri]
Length = 320
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/284 (50%), Positives = 183/284 (64%), Gaps = 28/284 (9%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPKDTPPPTR 58
MT FLPPNLLALF R P+ YLPPVE L +K K +G+A ++N FEDPKDTP
Sbjct: 1 MTAFLPPNLLALFEARPPIQYLPPVEDLLVDKNAKRAPMTGVAQYINLFEDPKDTPAKIP 60
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
V T+ + E +RR++ E +AYK+EQ IA W+P P A+ DP++TLF+ R+NY+TSESKL
Sbjct: 61 VVTKAQAKEEKRRQKEELLAYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RREFE YG IKK+ MVH++ GKPRGYAFIEY + +MH+AYK ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHDEA-GKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRAR 238
R RT K WLPRRLGGG G TR + RE + E+E+ +
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTR-----------------KTRESKAVIEEKEM-------Q 215
Query: 239 SGSNDRERERERRRSRSRERKRRTSRS-RSRDRRRRRSRERIRD 281
SG +RER RS SR+R++ + R+ DR RR S RD
Sbjct: 216 SGFGGGYEDRERERSGSRDRRQDSYRNGGGNDRDRRESSGGFRD 259
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 159/204 (77%), Gaps = 1/204 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+P+LPP+EK + +K Y+G+A FL EFED +TP P R+E
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPPIEKHANHRKLP-YTGVAQFLGEFEDASETPAPVRIE 59
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER ER+RRE+ EQ YKLEQ++ALW+P P AT +P+ T+F+AR+NYDT+ESK++R
Sbjct: 60 TREERKERKRREKQEQANYKLEQDLALWNPKKNPKATSNPYNTMFVARLNYDTTESKIKR 119
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
E + +G I IVMV N +TGKPRGY F+E+EHERDMH+A K +G+KIDG RV+ DVER
Sbjct: 120 ELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVKALNGRKIDGARVVTDVERG 179
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPD 204
RT W PRRLG GLG R+G D
Sbjct: 180 RTRPDWRPRRLGKGLGKNRQGPSD 203
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 174/273 (63%), Gaps = 24/273 (8%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPKDTPPPTR 58
MT FLPPNLLALF R PV YLPP + L +K K +G+A ++ FEDPKDTP
Sbjct: 1 MTAFLPPNLLALFEARPPVQYLPPCQDLLVDKNAKRAPMTGVAQYIQLFEDPKDTPAKIP 60
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
V T+ E E +RR++ E +AYK+EQ IA W+P P A+ DP++TLF+ R+NY+TSESKL
Sbjct: 61 VVTKAEAKEEKRRQKDELLAYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RREFE YG IKK+ MVH++ GKPRGYAFIEY + +MH+AYK ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHDEA-GKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRAR 238
R RT K WLPRRLGGG G TR + RE + ERE+A G
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTR-----------------KTREAKSVIEEREIASG---FG 219
Query: 239 SGSNDRERERERRRSRSRERKRRTSRSRSRDRR 271
G DR+RER R R R+ R RDRR
Sbjct: 220 GGYEDRDRERSGSRDR-RQDSYRNGGGNDRDRR 251
>gi|256072974|ref|XP_002572808.1| U1 small nuclear ribonucleoprotein 70 kD [Schistosoma mansoni]
gi|360042919|emb|CCD78329.1| putative u1 small nuclear ribonucleoprotein 70 kD [Schistosoma
mansoni]
Length = 307
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 160/204 (78%), Gaps = 1/204 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLPPNLLALFAPRDP+P+LPP+EK + +K Y+G+A FL EFED +TP P R+E
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPPIEKHANHRKL-PYTGVAQFLGEFEDASETPAPVRIE 59
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER ER+RRE+ EQ YKLEQ++ALW+P P AT +P+ T+F+AR+NY+T+ESKL+R
Sbjct: 60 TREERKERKRREKQEQANYKLEQDLALWNPKKNPKATSNPYNTMFVARLNYETTESKLKR 119
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
E +V+G I IVMV N +TGKPRGY F+E+EHERDMH+A K +G+KIDG RV+ DVER
Sbjct: 120 EIDVFGRINNIVMVKNVMTGKPRGYCFVEFEHERDMHAAVKSLNGRKIDGVRVVTDVERG 179
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPD 204
RT W PRRLG GLG R+G D
Sbjct: 180 RTRPDWRPRRLGKGLGKNRQGPSD 203
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 150/202 (74%), Gaps = 3/202 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPKDTPPPTR 58
MT FLPPNLLALF R PV YLPPVE L +K K +G+A ++ FEDPKDTP
Sbjct: 1 MTAFLPPNLLALFEARPPVQYLPPVEDLLVDKNAKRAPMTGVAQYIGLFEDPKDTPAKIP 60
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
V T+ + E +RR++ E +AYK+EQ IA W+P P A+ DP++TLF+ R+NY+TSESKL
Sbjct: 61 VVTKAQAKEEKRRQKDELLAYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RREFE YG IKK+ MVH++ GKPRGYAFIEY + +MH+AYK ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 179 RSRTVKGWLPRRLGGGLGGTRR 200
R RT K WLPRRLGGG G TR+
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTRK 201
>gi|157140206|ref|XP_001647625.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108866540|gb|EAT32293.1| AAEL015585-PA [Aedes aegypti]
Length = 176
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 150/176 (85%), Gaps = 4/176 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+P+LPP +KLPHEKK+ GY+G+ AFL+ FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ERRRRERAEQVAYKLE+EIA WDPN AT DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY----KHADGKKIDGRR 172
EFE YG I KI+++H+K TGKPRGYAFIEYEHERDMH Y H +K+ +R
Sbjct: 121 EFETYGKIVKIIIIHDKETGKPRGYAFIEYEHERDMHCKYCNHLNHLIPEKVSSKR 176
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/252 (50%), Positives = 169/252 (67%), Gaps = 16/252 (6%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEK--LPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR 58
M FLPPNLL +F R P+ Y+ P+ K LP+ YSG+AAF + F PP T+
Sbjct: 1 MASFLPPNLLLMFVARPPLEYIAPIPKPQLPN------YSGLAAFKSSFSADPPPPPATK 54
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
+E+R++ +R+ ++ +Q K + + WDP+S +T DP+KTLF++R++Y TSESKL
Sbjct: 55 IESRDQIKQRKIEQKVQQNTEKNLKSLKQWDPHSNTKSTGDPYKTLFVSRISYKTSESKL 114
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
+ EF YGPIKKI +V ++VTGKP+GYAFIE+E ERDM AYK ADG+KID RRVLVD+E
Sbjct: 115 KNEFSQYGPIKKIRLVTDQVTGKPKGYAFIEFEKERDMKIAYKQADGQKIDDRRVLVDIE 174
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNE-RERERYRLERER-------EL 230
R R +K W PR+ GGGLG TR GG DVN SGRE +E RE E+ R E+E+
Sbjct: 175 RGRVIKNWKPRKYGGGLGNTRAGGADVNQTFSGREMSEQREAEKRREEQEKLNQRQRGGS 234
Query: 231 AGGPPRARSGSN 242
+GGP R SG +
Sbjct: 235 SGGPDRNNSGGS 246
>gi|195996029|ref|XP_002107883.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
gi|190588659|gb|EDV28681.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
Length = 342
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 173/215 (80%), Gaps = 1/215 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP+L A F P++P+ YLPP++ H +K Y+G++ FL++FE +++ P E
Sbjct: 1 MTYCLPPHLSAFFTPKEPIKYLPPLDTPSHLRKRRPYTGVSVFLSQFETVRNSAPSVVTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREE+ R+++ER ++V+ KL++++A WDP++ P T DPFKTL ++R++YDT+ESKLRR
Sbjct: 61 TREEKRTRQKKERLDKVSAKLQKDLAQWDPHNNPKGTEDPFKTLLVSRLSYDTTESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
E E YG +K + +++ ++GKP+GYAF+E+EHERDM +AYK+ADGKK+DGRR+LVDVERS
Sbjct: 121 ELEAYGSVKSVRSIYD-LSGKPKGYAFVEFEHERDMKAAYKYADGKKVDGRRILVDVERS 179
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
RTVK WLPRRLGGGLGGTR GG D+N+KHSGRE+N
Sbjct: 180 RTVKNWLPRRLGGGLGGTRLGGEDINVKHSGREEN 214
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 153/212 (72%), Gaps = 7/212 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDT---PPPTRVET 61
L NLL LF PR P+ + PPVEK +K Y+G+A F++ F +P DT PP ET
Sbjct: 42 LTTNLLKLFEPRPPLEHKPPVEK----RKLPAYTGMAQFVSRFAEPGDTEYAPPVPTCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ +R R+ + EQ A K+ +E+ +DP + PN T DP+KTLF+AR+NY+TSE K++R+
Sbjct: 98 RAEKKDRIRQLKLEQGAAKVAEELQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKVKRD 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +KVT KPRGYAF+EY H RDM SAYK ADG+K+D +RVLVDVER R
Sbjct: 158 FEAYGPIKRVRLVTDKVTNKPRGYAFVEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
TV W PRRLGGGLG +R GG D + KHS RE
Sbjct: 218 TVPNWRPRRLGGGLGSSRIGGEDASQKHSARE 249
>gi|157129097|ref|XP_001661606.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872354|gb|EAT36579.1| AAEL011340-PB [Aedes aegypti]
Length = 189
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 143/157 (91%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+P+LPP +KLPHEKK+ GY+G+ AFL+ FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ERRRRERAEQVAYKLE+EIA WDPN AT DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
EFE YG I KI+++H+K TGKPRGYAFIEYEHERDMH
Sbjct: 121 EFETYGKIVKIIIIHDKETGKPRGYAFIEYEHERDMH 157
>gi|157129095|ref|XP_001661605.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872353|gb|EAT36578.1| AAEL011340-PA [Aedes aegypti]
Length = 186
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 130/166 (78%), Positives = 147/166 (88%), Gaps = 1/166 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LPPNLLALFAPRDP+P+LPP +KLPHEKK+ GY+G+ AFL+ FEDPKDTPPPTRVE
Sbjct: 1 MTQYLPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREER+ERRRRERAEQVAYKLE+EIA WDPN AT DPFKTLF+AR+NYDTSESKLRR
Sbjct: 61 TREERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA-YKHADG 165
EFE YG I KI+++H+K TGKPRGYAFIEYEHERDMH K A+G
Sbjct: 121 EFETYGKIVKIIIIHDKETGKPRGYAFIEYEHERDMHWLNLKWAEG 166
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 184/278 (66%), Gaps = 29/278 (10%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPKDTPPPTR 58
MT FLPPNLLALF R PV YLPPV++L +K K +G+A ++ FEDPKDTPP
Sbjct: 1 MTAFLPPNLLALFEARPPVQYLPPVQELLVDKNAKRAPMTGVAQYVGLFEDPKDTPPKLP 60
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
V T+E+ E +RR++ E +AYK+EQ IA W+P AT DP++TLF+ R+NY+TSESKL
Sbjct: 61 VVTKEQAKEEKRRQKEELLAYKVEQGIATWNPAENSRATEDPYRTLFVGRINYETSESKL 120
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RREFE YG IKK+ MVH++ +GKPRGYAFIEY + +MH+AYK ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHDE-SGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRAR 238
R RT K WLPRRLGGG G TR+ RE + ER++ G
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTRK-----------------TRESKAVIEERDMQSG----Y 218
Query: 239 SGSNDRERERERRRSRSRERKRRTSRS-RSRDRRRRRS 275
G +DRER+R S SR+R++ + R+ DR RR S
Sbjct: 219 GGYDDRERDR----SGSRDRRQESYRNGGGYDRDRRES 252
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 154/220 (70%), Gaps = 7/220 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF---EDPKDTPPPTRVET 61
L PNLL LF PR P+ Y PP+EK +K Y+G+A F++ F EDP+ PP + ET
Sbjct: 42 LTPNLLKLFEPRPPLEYKPPLEK----RKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ R R + EQ A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 98 RAEKKARIRNNKLEQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V K T KPRGYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 158 FEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
TV W PRRLGGGLG +R GG D + K S RE + R R
Sbjct: 218 TVPNWRPRRLGGGLGSSRMGGTDTDKKDSTREQQQGGRPR 257
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 177/273 (64%), Gaps = 19/273 (6%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K SG+A F+++F P D PP ET
Sbjct: 45 LTANLLKLFEPRPPLEYKPPPEK----RKCPPLSGMAQFVSKFAQPGDPEYAPPVPETET 100
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++ R + R E+ A K +E+ +DP++ PN + DP+KTLF+A+++Y+T+ES+++RE
Sbjct: 101 PAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKRE 160
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K T KPRGYAFIEY H RDM +AYK ADG+KIDGRRVLVDVER R
Sbjct: 161 FESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGR 220
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGS 241
TV W PRRLGGGLG TR GG +VN +HSGRE + E R+ +R
Sbjct: 221 TVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEPRVREDRH------------ 268
Query: 242 NDRERERERRRSRSRERKRRTSRSRSRDRRRRR 274
+DR+RE R R R ++++R SR S +R R R
Sbjct: 269 SDRDREISRERVRDKDKERERSREHSNERVRDR 301
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 7/220 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF---EDPKDTPPPTRVET 61
L PNLL LF PR P+ Y PP+EK +K Y+G+A F++ F EDP+ PP + ET
Sbjct: 42 LTPNLLKLFEPRPPLEYKPPLEK----RKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ R R + EQ A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 98 RAEKKARIRNNKLEQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V K T KPRGYAFIEY H RDM +AY ADG+K+D RRVLVDVER R
Sbjct: 158 FEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYPAADGRKVDNRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
TV W PRRLGGGLG TR GG D + K S RE + R R
Sbjct: 218 TVPNWRPRRLGGGLGSTRMGGTDTDKKDSTREQQQGGRPR 257
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 153/220 (69%), Gaps = 7/220 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF---EDPKDTPPPTRVET 61
L PNLL LF PR P+ Y PP+EK +K Y+G+A +++ F EDP+ PP + ET
Sbjct: 42 LTPNLLKLFEPRPPLEYKPPLEK----RKLPAYTGMAQYVSHFATPEDPEYAPPVPKCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ R R + EQ A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 98 RAEKKARIRNNKLEQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V K T KPRGYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 158 FEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
TV W PRRLGGGLG +R GG D + K S RE R R
Sbjct: 218 TVPNWRPRRLGGGLGSSRMGGADTDKKDSTREQQHGGRPR 257
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 149/211 (70%), Gaps = 7/211 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF---EDPKDTPPPTRVET 61
L PNLL LF PR P+ Y PP+EK +K Y+G+A F++ F EDP+ PP + ET
Sbjct: 42 LTPNLLKLFEPRPPLEYKPPLEK----RKLPAYTGMAQFVSHFAKSEDPEYAPPVPKCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ R R + EQ A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 98 RAEKKARIRNNKLEQGAAKIAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK + +V K T KPRGYAFIEY H RDM SAYK ADG+K+D +RVLVDVER R
Sbjct: 158 FEGYGPIKWVRLVTEKDTSKPRGYAFIEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGR 212
TV W PRRLGGGLG +R GG D + K S R
Sbjct: 218 TVPNWRPRRLGGGLGSSRMGGADADKKDSTR 248
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 154/220 (70%), Gaps = 7/220 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF PR P+ + PPVEK +K Y+G+A F+++F +P D PP ET
Sbjct: 43 LTPNLLKLFEPRPPLDFKPPVEK----RKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + +Q A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 99 KAEKKDRIRKSKLDQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKRE 158
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 159 FEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGR 218
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
TV W PRRLGGGLG +R GG + K S R+ R R
Sbjct: 219 TVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPR 258
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 154/220 (70%), Gaps = 7/220 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF PR P+ + PPVEK +K Y+G+A F+++F +P D PP ET
Sbjct: 43 LTPNLLKLFEPRPPLDFKPPVEK----RKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + +Q A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 99 KAEKKDRIRKSKLDQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKRE 158
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 159 FEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGR 218
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
TV W PRRLGGGLG +R GG + K S R+ R R
Sbjct: 219 TVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPR 258
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 150/212 (70%), Gaps = 7/212 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ + PP+EK +K YSG++ F++ F +P D PP ET
Sbjct: 42 LTTNLLKLFEPRPPLEHKPPLEK----RKLPAYSGMSQFVSRFAEPGDPEYAPPVPTCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ +R R+ + E+ A K+ +E+ +DP + PN T DP+KTLF+AR+ Y+TSE K++R+
Sbjct: 98 RAEKKDRIRQLKLEEGAAKVAEELQKYDPQNDPNVTGDPYKTLFVARLGYETSEQKVKRD 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +KVT KPRGYAF+EY H RDM SAYK ADG+K+D +RVLVDVER R
Sbjct: 158 FEAYGPIKRVRLVTDKVTNKPRGYAFVEYAHTRDMKSAYKQADGRKVDNKRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
TV W PRRLGGGLG +R GG D KHS RE
Sbjct: 218 TVPNWRPRRLGGGLGSSRIGGEDAAQKHSARE 249
>gi|313229018|emb|CBY18170.1| unnamed protein product [Oikopleura dioica]
Length = 322
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 153/203 (75%), Gaps = 2/203 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPKDTPPPTR 58
MT FLPPNL+ALF PR+PV + P LP E+ H YSGIA F+N+F+ +TPP R
Sbjct: 1 MTAFLPPNLIALFQPREPVEFKNPEGDLPWERDRTKHPYSGIAPFVNDFDPSTETPPKVR 60
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
VETREE+ +R+R+++ E+ K E+ + W+P+ DPFKTLF+AR+ ++T++SKL
Sbjct: 61 VETREEKEKRKRKDKLEKGMKKTEENLDEWNPHEDDKVESDPFKTLFVARIKFETNDSKL 120
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
+REFE YG IK + +V N GKP+GYAF+E+E ERDMHSAYK+ADGKKIDG+RVLVDVE
Sbjct: 121 KREFEEYGRIKSVRIVENLKNGKPKGYAFVEFEKERDMHSAYKYADGKKIDGKRVLVDVE 180
Query: 179 RSRTVKGWLPRRLGGGLGGTRRG 201
R RTVKGW PRRLGGGLG +RR
Sbjct: 181 RGRTVKGWRPRRLGGGLGNSRRA 203
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 171/258 (66%), Gaps = 17/258 (6%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K SG+A F+++F +P + PP ET
Sbjct: 45 LTANLLKLFEPRPPLEYKPPPEK----RKCPPLSGMAQFVSKFAEPGEPEYAPPVPETET 100
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++ R + R E+ A K +E+ +DP++ PN + DP+KTLF+A+++Y+T+ES+++RE
Sbjct: 101 PAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKRE 160
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K KPRGYAFIEY H RDM +AYK ADG+KIDGRRVLVDVER R
Sbjct: 161 FESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGR 220
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNE------RERERYRLERERELAGGPP 235
TV W PRRLGGGLG TR GG +VN +HSGRE + R RE +R+RE++
Sbjct: 221 TVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEPRVREDRHADRDREIS---- 276
Query: 236 RARSGSNDRERERERRRS 253
R R DRERER R S
Sbjct: 277 RERGRDKDRERERSREHS 294
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/272 (49%), Positives = 175/272 (64%), Gaps = 14/272 (5%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K Y+G+A F++ F +P D PP VE
Sbjct: 42 LTNNLLKLFEPRPPLEYKPPPEK----RKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVEL 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++ ER + R E+ K +++ +DPN+ PNAT DP+KTLF++R+NY++SESK++RE
Sbjct: 98 PSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +++T KP+GYAFIEY H RDM +AYK ADG+KIDGRRVLVDVER R
Sbjct: 158 FESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNL---KHSGREDNERERERYRLERERELAGGPPRAR 238
TV W PRRLGGGLG +R GG + + + GR E R R ERE+ G R R
Sbjct: 218 TVPNWRPRRLGGGLGTSRVGGGEEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERER 277
Query: 239 SGSNDRERERERRRSRSRERKRRTSRSRSRDR 270
S RE E+ R RSR+R R R RD+
Sbjct: 278 S----RELSHEQPRERSRDRPREDKHHRDRDQ 305
>gi|221126649|ref|XP_002157902.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Hydra
magnipapillata]
Length = 351
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 172/214 (80%), Gaps = 1/214 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLP NLLALF+ R P+P+ PPVE L K +H Y G+ F++ FE K PP TR E
Sbjct: 1 MTQFLPANLLALFSARPPIPFKPPVEGLKKRKNSHCYVGLGDFVSNFE-VKPPPPATRGE 59
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
TREE+ ER++ E+ A +LE+++A WDP++ PNA+ DPFKTLF+AR+NYDT+ESKLRR
Sbjct: 60 TREEKEERKKYEKETATAKELERKLASWDPHTDPNASGDPFKTLFVARINYDTTESKLRR 119
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
E E +GPI+KI MV+N V KPRGYAF+E+EHERDM +A+KH+DGKKIDGRR++VDVER
Sbjct: 120 ELETHGPIRKIHMVYNFVKRKPRGYAFVEFEHERDMQAAFKHSDGKKIDGRRIVVDVERG 179
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
RTVK W PRRLGGGLGGTRRGGPD N++HSGR D
Sbjct: 180 RTVKSWRPRRLGGGLGGTRRGGPDDNIRHSGRVD 213
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 164/253 (64%), Gaps = 29/253 (11%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ + PP EK +K Y+G+A F + F +P + +PP + ET
Sbjct: 42 LTANLLKLFEPRPPLEFKPPPEK----RKCPPYTGMAQFASNFAEPGEPEYSPPVQKAET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+R R + R E+ A K +E +DPN+ PN + DP+KTLF+AR+NY+T+ES+++RE
Sbjct: 98 PAQRRARIHKLRLEKGAEKATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ ++ +K T KPRGYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 158 FEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRA---- 237
TV W PRRLGGGLG TR GG +VN K+SG RE++ GGPPR+
Sbjct: 218 TVPNWRPRRLGGGLGTTRVGGEEVNPKYSG--------------REQQPVGGPPRSEEPR 263
Query: 238 ----RSGSNDRER 246
R G DRE+
Sbjct: 264 TREDRHGDRDREK 276
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 177/282 (62%), Gaps = 29/282 (10%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ + PP EK +K +G+A F++ F +P D PP + ET
Sbjct: 42 LTANLLKLFEPRPPLEFKPPPEK----RKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
ER R R E+ A K +E+ + PN T DP+KTLF+AR+NY+T+ES+++RE
Sbjct: 98 PTERRARIHLLRIEKGAEKAAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ ++ +KVTGKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVER R
Sbjct: 158 FESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGP-----PR 236
TV W PRRLGGGLG TR GG + + +HSG RE++ +G P PR
Sbjct: 218 TVPNWRPRRLGGGLGTTRVGGEENSQRHSG--------------REQQQSGAPSRSEEPR 263
Query: 237 ARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRER 278
R DR ER+R +S + R R R +SR+ RS+ER
Sbjct: 264 VRE---DRHGERDREKSYDKGRDRERDREKSREHSHERSKER 302
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 167/256 (65%), Gaps = 24/256 (9%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K SG+A F+++F +P + PP ET
Sbjct: 45 LTANLLKLFEPRPPLEYKPPPEK----RKCPPLSGMAQFVSKFAEPGEPEYAPPVPETET 100
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++ R + R E+ A K +E+ +DP++ PN + DP+KTLF+A+++Y+T+ES+++RE
Sbjct: 101 PAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKRE 160
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K KPRGYAFIEY H RDM +AYK ADG+KIDGRRVLVDVER R
Sbjct: 161 FESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGR 220
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGS 241
TV W PRRLGGGLG TR GG +VN +HSGR +RE + RER
Sbjct: 221 TVPNWRPRRLGGGLGTTRVGGEEVNQRHSGRSSRDRE-----ISRER------------G 263
Query: 242 NDRERERERRRSRSRE 257
D++RERER R S E
Sbjct: 264 RDKDRERERSREHSHE 279
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 150/212 (70%), Gaps = 7/212 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF R P+ + PPVEK +K Y+G+A F++ F +P D PP ET
Sbjct: 43 LTPNLLKLFEARPPLEHKPPVEK----RKLPAYTGMAQFVSRFAEPGDQEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ +R ++ + EQ A K+ +++ +DP S PN T DP+KTLF+AR+NY+TSES+++RE
Sbjct: 99 RAEKKDRIQKFKLEQGAAKVAEDLLKYDPQSDPNTTGDPYKTLFVARLNYETSESRVKRE 158
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+D +RVLVDVER R
Sbjct: 159 FEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGR 218
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
TV W PRRLGGGLG +R G + + K S RE
Sbjct: 219 TVPNWRPRRLGGGLGSSRISGQNADQKPSARE 250
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 173/268 (64%), Gaps = 10/268 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K Y+G+A F++ F +P D PP VE
Sbjct: 42 LTNNLLKLFEPRPPLEYKPPPEK----RKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVEL 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++ ER + R E+ K +++ +DPN+ PNAT DP+KTLF++R+NY++SESK++RE
Sbjct: 98 PSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +++T KP+GYAFIEY H RDM +AYK ADG+KIDGRRVLVDVER R
Sbjct: 158 FESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNL---KHSGREDNERERERYRLERERELAGGPPRAR 238
TV W PRRLGGGLG +R GG + + + GR E R R ERE+ G R R
Sbjct: 218 TVPNWRPRRLGGGLGTSRVGGGEEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERER 277
Query: 239 SGSNDRERERERRRSRSRERKRRTSRSR 266
S + E+ R RSR R R+ + R R
Sbjct: 278 ERSRELSHEQPRERSRDRPREDKHHRDR 305
>gi|375073667|gb|AFA34392.1| U1 small nuclear ribonucleoprotein 70KDa, partial [Ostrea edulis]
Length = 162
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 137/157 (87%), Gaps = 2/157 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT FLPPNLLALFA RDP+ YLPPV KL EKK Y G++ FL EFEDPKDTPPPTRVE
Sbjct: 8 MTAFLPPNLLALFAARDPIQYLPPVAKLGSEKKRVPYQGVSIFLKEFEDPKDTPPPTRVE 67
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T++ER ER+R+ERAEQ+AYKLEQ++ALWDP++ AT DP+KTLF+AR+NYDTSESKLRR
Sbjct: 68 TKDERKERKRKERAEQIAYKLEQDLALWDPSN--AATGDPYKTLFVARINYDTSESKLRR 125
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
EFEVYGPI+KI ++ +K +GKPRGYAFIE+EHERDMH
Sbjct: 126 EFEVYGPIRKISLLSDKSSGKPRGYAFIEFEHERDMH 162
>gi|260805174|ref|XP_002597462.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
gi|229282727|gb|EEN53474.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
Length = 173
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQ+LPPNLLALFAPR+P+PYLPP +KLP EK + Y+G+ L FEDPKDTPPPTR
Sbjct: 1 MTQYLPPNLLALFAPREPIPYLPPTDKLPCEKIRRAPYAGVTPHLQTFEDPKDTPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETR+ERLER+R+E+ E A +LE++++ WDP + NA+ D +KTLF+AR+NYDTSESKLR
Sbjct: 61 ETRQERLERKRKEKLEAHANRLEEKVSEWDPANDANASGDAYKTLFVARINYDTSESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
REFEVYGPI+ I M + TGKPRGYAFIEYEHERDMH Y
Sbjct: 121 REFEVYGPIRSIKMTKDVNTGKPRGYAFIEYEHERDMHCKY 161
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 164/249 (65%), Gaps = 14/249 (5%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K +G+A F+++F +P + +PP VET
Sbjct: 39 LTANLLKLFEPRPPLEYKPPPEK----RKCPPLTGMAQFVSKFAEPGEPEYSPPVPVVET 94
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
ER R + R E+ A K +E+ +DP++ PN + DP+KTLF+AR++Y+T+ES+++RE
Sbjct: 95 PAERRARVHKLRLEKGAAKAAEELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKRE 154
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YG IK++ +V + + KPRGYAFIEY H RDM +AYK ADG+KI+GRRVLVDVER R
Sbjct: 155 FESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGR 214
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGS 241
TV W PRRLGGGLG TR GG +VN +HSGRE + R R RE R
Sbjct: 215 TVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPSRSEEPRVRE-------ERHAD 267
Query: 242 NDRERERER 250
DRE+ RER
Sbjct: 268 RDREKSRER 276
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 154/233 (66%), Gaps = 20/233 (8%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF PR P+ + PPVEK +K Y+G+A F+++F +P D PP ET
Sbjct: 43 LTPNLLKLFEPRPPLDFKPPVEK----RKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + +Q A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 99 KAEKKDRIRKSKLDQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKRE 158
Query: 122 FEVYGPIKK-------------IVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKI 168
FE YGPIK+ + +V +K T KPRGYAFIEY H RDM +AYK ADG+K+
Sbjct: 159 FEAYGPIKRAWGFYILGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKV 218
Query: 169 DGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
D RRVLVDVER RTV W PRRLGGGLG +R GG + K S R+ R R
Sbjct: 219 DNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPR 271
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 154/233 (66%), Gaps = 20/233 (8%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF PR P+ + PPVEK +K Y+G+A F+++F +P D PP ET
Sbjct: 43 LTPNLLKLFEPRPPLDFKPPVEK----RKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + +Q A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 99 KAEKKDRIRKSKLDQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKRE 158
Query: 122 FEVYGPIKK-------------IVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKI 168
FE YGPIK+ + +V +K T KPRGYAFIEY H RDM +AYK ADG+K+
Sbjct: 159 FEAYGPIKRAWGFYILGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKV 218
Query: 169 DGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
D RRVLVDVER RTV W PRRLGGGLG +R GG + K S R+ R R
Sbjct: 219 DNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPR 271
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 154/200 (77%), Gaps = 1/200 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLP NLLALF R P+PY PP ++L ++K SG++ +++ FEDPKDTPP E
Sbjct: 43 MTQFLPDNLLALFEARPPLPYKPPPDELLIDRKRPKMSGLSEYIHLFEDPKDTPPKPVYE 102
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T+EER RRR+E+ E +AYK+EQ IA W P P+AT+DP+KTLF+AR+NY+TSESKLRR
Sbjct: 103 TKEERRARRRKEKEELLAYKIEQGIATWSPAQNPSATVDPYKTLFVARINYETSESKLRR 162
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE +G I ++ +VH+K GKPRGYAFIEY+H+ M AYK ADG KIDGRRV+VD ER
Sbjct: 163 EFEQFGKITRLALVHDK-NGKPRGYAFIEYQHKESMSEAYKKADGMKIDGRRVVVDYERG 221
Query: 181 RTVKGWLPRRLGGGLGGTRR 200
RT K WLPRRLGGG G TRR
Sbjct: 222 RTQKSWLPRRLGGGKGDTRR 241
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 152/215 (70%), Gaps = 7/215 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K +G+A F+++F +P + +PP VET
Sbjct: 43 LTTNLLKLFEPRPPLEYKPPPEK----RKCPPLTGMAQFVSKFAEPGEPEYSPPVPVVET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
ER R + R E+ A K +E+ +DP++ PN + DP+KTLF+AR++Y+T+ES+++RE
Sbjct: 99 PAERRARVHKLRLEKGAAKAAEELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKRE 158
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YG IK++ +V + + KPRGYAFIEY H RDM +AYK ADG+KI+GRRVLVDVER R
Sbjct: 159 FESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGR 218
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNE 216
TV W PRRLGGGLG TR GG +VN +HSGRE +
Sbjct: 219 TVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ 253
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/285 (44%), Positives = 171/285 (60%), Gaps = 43/285 (15%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF R + + PPV+K +K Y+G+A F++ F +P D PP ET
Sbjct: 43 LTPNLLKLFEARPMLEHKPPVQK----RKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + EQ A K+ +E+ ++P S PN T DP+KTLF+AR+NY+TSES+++RE
Sbjct: 99 KAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKRE 158
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+D +RVLVDVER R
Sbjct: 159 FEAYGPIKRVRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGR 218
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGS 241
TV W PRRLGGGLG +R G + K PP + S
Sbjct: 219 TVPNWRPRRLGGGLGSSRICGASADQK-------------------------PPAREAPS 253
Query: 242 NDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEE 286
R R E +R SR DR R +SRER+R+ D++E
Sbjct: 254 VGRPRSEEPKRGDSR-----------VDRDREKSRERVRERDLDE 287
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 164/254 (64%), Gaps = 29/254 (11%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ + PP P ++K Y+G+A F + F +P + +PP + ET
Sbjct: 42 LTANLLKLFEPRPPLEFKPP----PEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+R R + R E+ A K +E +DPN+ PN + DP+KTLF+AR+NY+T+ES+++RE
Sbjct: 98 PAQRRARIHKLRLEKGAEKATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ ++ +K T KPRGYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 158 FEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRA---- 237
TV W PRRLGGGLG TR GG +VN K+SGRE ++ GGPPR+
Sbjct: 218 TVPNWRPRRLGGGLGTTRVGGEEVNPKYSGRE--------------QQPVGGPPRSEEPR 263
Query: 238 ----RSGSNDRERE 247
R G DRE+
Sbjct: 264 TREDRHGDRDREKS 277
>gi|443704417|gb|ELU01479.1| hypothetical protein CAPTEDRAFT_111454 [Capitella teleta]
Length = 194
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/157 (71%), Positives = 137/157 (87%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQ+LP NLL LFAPRDP+PYL P +KL EKK Y+G+A +L+EFEDPKDTPPPTRVE
Sbjct: 1 MTQYLPQNLLGLFAPRDPIPYLVPTDKLRSEKKEFRYAGVAQYLSEFEDPKDTPPPTRVE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T+EER ER+++ER EQVAYKLEQ++ALWDP + P+ T DPFKTLF+ARVNYD+SESKLRR
Sbjct: 61 TKEERKERKKKERLEQVAYKLEQDLALWDPANDPSVTGDPFKTLFVARVNYDSSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
EFE +GP+++I +V N+ TGKPRGYAFIE+EHERDMH
Sbjct: 121 EFEAHGPVRRISLVTNRKTGKPRGYAFIEFEHERDMH 157
>gi|338762844|gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 149/229 (65%), Gaps = 24/229 (10%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K Y+G+A F++ F P D PP + ET
Sbjct: 42 LTTNLLKLFEPRPPLEYKPPPEK----RKCPPYTGMAQFVSNFAQPGDAEYAPPVQKAET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
ER R + R E+ A K +E+ +DPN+ PN + DP+KTLF+AR+NY+T+ES+++RE
Sbjct: 98 PVERRARIHKIRLEEGAKKAAEELEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKRE 157
Query: 122 FEVYGPIKKIV-----------------MVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
FE YG IK++ +V +K T KPRGYAFIEY H RDM +AYK AD
Sbjct: 158 FEAYGAIKRVGIKEHRECALVIGFWFVRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQAD 217
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
GKKID RRVLVDVER RTV W PRRLGGGLG TR GG ++N ++SGRE
Sbjct: 218 GKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEELNQRYSGRE 266
>gi|825725|emb|CAA29964.1| hU1-70K-like protein (216 AA) [Homo sapiens]
Length = 216
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 139/164 (84%), Gaps = 1/164 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 51 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 110
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 111 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 170
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHS + A
Sbjct: 171 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSTTQLA 214
>gi|14028993|gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 491
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 154/248 (62%), Gaps = 35/248 (14%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF PR P+ + PPVEK +K Y+G+A F+++F +P D PP ET
Sbjct: 43 LTPNLLKLFEPRPPLDFKPPVEK----RKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + +Q A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 99 KAEKKDRIRKSKLDQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKRE 158
Query: 122 FEVYGPIKK----------------------------IVMVHNKVTGKPRGYAFIEYEHE 153
FE YGPIK+ + +V +K T KPRGYAFIEY H
Sbjct: 159 FEAYGPIKRQTSLKNVGDGTTYLQAWGFYILGFIRLLVRLVTDKETNKPRGYAFIEYMHT 218
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
RDM +AYK ADG+K+D RRVLVDVER RTV W PRRLGGGLG +R GG + K S R+
Sbjct: 219 RDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRD 278
Query: 214 DNERERER 221
R R
Sbjct: 279 QQHAGRPR 286
>gi|157816921|ref|NP_001101953.1| U1 small nuclear ribonucleoprotein 70 kDa [Rattus norvegicus]
gi|337443|gb|AAA36571.1| ribonucleoprotein antigen [Homo sapiens]
gi|26346286|dbj|BAC36794.1| unnamed protein product [Mus musculus]
gi|29165791|gb|AAH49128.1| Snrnp70 protein [Mus musculus]
gi|119572834|gb|EAW52449.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_d [Homo sapiens]
gi|148690899|gb|EDL22846.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690900|gb|EDL22847.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690902|gb|EDL22849.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|149055930|gb|EDM07361.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055932|gb|EDM07363.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055935|gb|EDM07366.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|193788471|dbj|BAG53365.1| unnamed protein product [Homo sapiens]
gi|417396419|gb|JAA45243.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Desmodus rotundus]
Length = 166
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 139/164 (84%), Gaps = 1/164 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHS + A
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSTTQLA 164
>gi|149055931|gb|EDM07362.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 167
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/160 (72%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
REFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHS
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHST 160
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/223 (70%), Positives = 181/223 (81%), Gaps = 2/223 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKT-HGYSGIAAFLNEFE-DPKDTPPPTR 58
+T+FLPP LAL APRDP+P PP EK P +K T H IA F DP+D PPPTR
Sbjct: 32 ITRFLPPTFLALLAPRDPLPSPPPREKPPKKKHTNHPTCAIAPPPRGFGGDPRDAPPPTR 91
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKL
Sbjct: 92 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 151
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RREFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE
Sbjct: 152 RREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 211
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
R RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 212 RGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 254
>gi|30802167|gb|AAH51414.1| Snrnp70 protein [Mus musculus]
Length = 186
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 135/159 (84%), Gaps = 1/159 (0%)
Query: 3 QFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRVET 61
QFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR ET
Sbjct: 1 QFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAET 60
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
REER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLRRE
Sbjct: 61 REERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRRE 120
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
FEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMH Y
Sbjct: 121 FEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHCEY 159
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 137/196 (69%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
LP +L LF PR P+ +L P+++LP+EK Y+GI +++FE+P DTP + +R E
Sbjct: 7 LPFSLHRLFEPRAPLFFLKPLDQLPYEKNLPSYTGIGHLVHKFENPADTPAAVYIPSRLE 66
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
++R+ + A +LE A W P PNAT DPFKTLFI+ ++YDT+E L+RE E
Sbjct: 67 IRAKKRQADESRHASELETATAAWHPKENPNATSDPFKTLFISNLSYDTTEESLKREMEE 126
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IK+I +V N T KPRGYAF+E+EHERDM AYK ADG+K+DGRR++VD ER RT+K
Sbjct: 127 YGSIKQIHIVRNTQTSKPRGYAFVEFEHERDMKDAYKQADGRKVDGRRIVVDFERGRTIK 186
Query: 185 GWLPRRLGGGLGGTRR 200
W PRRLGGG+G R+
Sbjct: 187 EWKPRRLGGGVGLPRQ 202
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 139/204 (68%), Gaps = 6/204 (2%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK--DTPPPTRVETR 62
L PNLL LF P PV Y P+EK K+ Y+GIA F++ FE+ D +VET
Sbjct: 1 LTPNLLRLFDPPPPVEYKEPIEK----KELPPYTGIAQFVSCFENLSIDDQESQAKVETT 56
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREF 122
ER R R E+ KL +EI +DP S PNA DP+KTLFI +++YDT+E +L+REF
Sbjct: 57 AERRARVNAARLEKGKEKLAEEIPKYDPRSDPNARGDPYKTLFIGKLSYDTTEHRLQREF 116
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
E YGP+K++ +VH+K T KPRGYAF+E+ H +DM +AYKHADG KID RR+LVDVER RT
Sbjct: 117 ERYGPVKRVRLVHDKHTDKPRGYAFVEFYHSQDMKNAYKHADGTKIDNRRILVDVERGRT 176
Query: 183 VKGWLPRRLGGGLGGTRRGGPDVN 206
VK WLP+RLGGGLG R P+
Sbjct: 177 VKDWLPKRLGGGLGNARSSQPEAT 200
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/173 (76%), Positives = 152/173 (87%)
Query: 49 DPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIAR 108
DP+D PPPTR ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+AR
Sbjct: 1 DPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVAR 60
Query: 109 VNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKI 168
VNYDT+ESKLRREFEVYGPIK+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKI
Sbjct: 61 VNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKI 120
Query: 169 DGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
DGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 121 DGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 173
>gi|328873267|gb|EGG21634.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
fasciculatum]
Length = 433
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 150/216 (69%), Gaps = 5/216 (2%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD-TPPPTRVE 60
+LPPNLL +F PR P+ YL P EK KK Y+GI+AF N F D P P ++
Sbjct: 3 ANYLPPNLLLMFQPRHPIAYLKPTEK----KKLPEYTGISAFKNTFLTEADPNPNPDKMV 58
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
REE R ++ E +A K ++ + W+P++ AT DP+KTLF+AR++Y+T E+KL+
Sbjct: 59 LREEIKRESRTKKEEAIAQKNQELLQQWEPHTETRATGDPYKTLFVARIDYNTPETKLKE 118
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF +GPIKKI +VH+ V+GKP+GYAFIE+E ERDM +A+K+ADG KID +RVLVD ER
Sbjct: 119 EFSQFGPIKKIRLVHDAVSGKPKGYAFIEFEKERDMKAAHKYADGLKIDEKRVLVDFERG 178
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNE 216
R +K W PRR GGGLGGTR G P+VN SGRE NE
Sbjct: 179 RVMKNWKPRRFGGGLGGTRLGAPEVNQTFSGRELNE 214
>gi|393904658|gb|EFO18286.2| hypothetical protein LOAG_10208 [Loa loa]
Length = 347
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 156/236 (66%), Gaps = 37/236 (15%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLP NLLALF R P+PY PP ++L ++K SG++ +++ FEDPKDTPP E
Sbjct: 1 MTQFLPDNLLALFEARPPLPYKPPPDELLIDRKRPKMSGLSEYIHLFEDPKDTPPKPVYE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T+EER RRR+E+ E +AYK+EQ IA W P P+AT+DP+KTLF+AR+NY+TSESKLRR
Sbjct: 61 TKEERRARRRKEKEELLAYKIEQGIATWSPAQNPSATVDPYKTLFVARINYETSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM------------------------ 156
EFE +G I ++ +VH+K GKPRGYAFIEY+H+ M
Sbjct: 121 EFEQFGKITRLALVHDK-NGKPRGYAFIEYQHKESMSVTGIFVVVVVCCCKWKGSIRYEW 179
Query: 157 --------HS----AYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
H+ AYK ADG KIDGRRV+VD ER RT K WLPRRLGGG G TRR
Sbjct: 180 SCLSLECTHTSAMEAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTRR 235
>gi|90076320|dbj|BAE87840.1| unnamed protein product [Macaca fascicularis]
Length = 344
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/153 (71%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEH 152
REFEVYGPIK+I MV++K +GKPRGYAFIEYEH
Sbjct: 121 REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEH 153
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 178/323 (55%), Gaps = 61/323 (18%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L NLL LF PR P+ Y PP EK +K Y+G+A F+ +F +P D PP ET
Sbjct: 42 LTANLLKLFEPRPPLEYKPPPEK----RKCPPYTGMAQFVTQFAEPGDPEYAPPVQEAET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+R R + R E+ A K +E+ +DPNS PN + DP+KTLF+AR+NY+T+ES+++RE
Sbjct: 98 PTQRRARIHQLRLEKGAEKAAEELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKRE 157
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YGPIK++ ++ +K KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 158 FESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
Query: 182 TVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGS 241
TV W PRRLG GG R G
Sbjct: 218 TVPNWRPRRLG---------------------------------------GGLGTTRVGG 238
Query: 242 NDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDR 301
E +R+ RE ++ SRS + R R R RD R K R +R RDR
Sbjct: 239 -----EEVNQRNSGRELQQSGGSSRSEEPRPREDRYNERD--------REKSR-ERGRDR 284
Query: 302 DRKRRRERENSEDRNERKRDRKE 324
+++R + RE+S +R R RD KE
Sbjct: 285 EKEREKSREHSHER-PRDRDHKE 306
>gi|325190173|emb|CCA24652.1| hypothetical protein TRIADDRAFT_51837 [Albugo laibachii Nc14]
Length = 305
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 149/213 (69%), Gaps = 13/213 (6%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
LP ++ ALF P+ +LP + K +K YSGI+ F+++FE PPP R+ +
Sbjct: 25 LPMHIRALFEANAPLTHLPQLTK----RKMPPYSGISDFISQFEQ---DPPPQRLLSETP 77
Query: 65 RLERRRRERAEQVAY---KLEQEIALWDPNSFPN-ATMDPFKTLFIARVNYDTSESKLRR 120
+ ER+ R RAEQ+A KL+QEIA WDP + T D +KTLF+ R++Y+T+E +LR
Sbjct: 78 K-ERKERLRAEQIAKHQEKLKQEIAKWDPAVQDDRKTEDAYKTLFVGRISYETTEKQLRH 136
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE +G IK I +V + GK RGYAFIEYEHE D+ +AYK ADGKKIDGRRV+VDVER
Sbjct: 137 EFEQFGAIKHIRLVEGE-EGKSRGYAFIEYEHEADLKAAYKFADGKKIDGRRVVVDVERG 195
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
RTV W PR+ GGG+G TR+GGPDVN+K+SGRE
Sbjct: 196 RTVHEWRPRKFGGGIGETRKGGPDVNVKYSGRE 228
>gi|324518187|gb|ADY47028.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 311
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
Query: 38 SGIAAFLNEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNAT 97
SG+A +++ FEDPKDTPP ET+EER RRR+E+ E +AYK+EQ IA W P P AT
Sbjct: 32 SGLAEYVHLFEDPKDTPPKPIFETKEERRARRRKEKEELLAYKIEQGIATWAPAENPTAT 91
Query: 98 MDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
DP+KTLF+AR+NY+TSESKLRREFE +G I K+++VH+ GKPRGYAFIEY+H+ +M
Sbjct: 92 TDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHDP-NGKPRGYAFIEYQHKENMS 150
Query: 158 SAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
AYK ADG KIDGRRV+VD ER RT K WLPRRLGGG G TRR
Sbjct: 151 EAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTRR 193
>gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus]
Length = 378
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/152 (76%), Positives = 133/152 (87%)
Query: 70 RRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIK 129
RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLRREFEVYGPIK
Sbjct: 1 RREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIK 60
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+I MV++K +GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PR
Sbjct: 61 RIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 120
Query: 190 RLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 121 RLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 152
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 153/222 (68%), Gaps = 3/222 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLP--PVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPT 57
M+++LPP LL LF PR P+P +P + PHE+ SG+A ++++FEDPKD P
Sbjct: 1 MSKYLPPYLLNLFKPRPPLPQIPEKDLAPEPHERTYNQPLSGVATYVSKFEDPKDAPKAE 60
Query: 58 RVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK 117
+ ER ++R+ E+ LE+ WDP PNA D +KTLF+ R+NYD +E
Sbjct: 61 PTLNKAERKAKKRQAAEEKNKVVLEKARDEWDPEKDPNAQGDAYKTLFVGRLNYDVTEDD 120
Query: 118 LRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 177
L +E E YG ++++ +V +K++GKPRGYAF+E+EHERDM +AY++ADG +++GRR++VD
Sbjct: 121 LLKEMESYGKVRQVAVVRDKISGKPRGYAFVEFEHERDMRAAYRYADGMRLNGRRIVVDF 180
Query: 178 ERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERER 219
ER RTV GW PRRLGGGLGGTR GGPD N+K SGR D + R
Sbjct: 181 ERGRTVDGWFPRRLGGGLGGTRIGGPDQNIKASGRYDPNKHR 222
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/135 (81%), Positives = 122/135 (90%)
Query: 87 LWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
+WDP++ PNA D FKTLF+ARVNYDT+ESKLRREFEVYGPIK+I MV++K +GKPRGYA
Sbjct: 1 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 60
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVN 206
FIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN
Sbjct: 61 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVN 120
Query: 207 LKHSGREDNERERER 221
++HSGR+D R ER
Sbjct: 121 IRHSGRDDTSRYDER 135
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 139/195 (71%), Gaps = 12/195 (6%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTH--GYSGIAAFLNEFEDPKDTPPPTR-VET 61
+PP++LALF R PP+E P KK H GY G+A ++N+FE PPPT ET
Sbjct: 6 MPPHILALFQAR------PPLEPFPAFKKKHTRGYVGLADYVNKFES--GPPPPTVPYET 57
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++RL R++RER K ++ I ++P T DPF+TLF+A ++YDT+E KL+RE
Sbjct: 58 PKQRLLRQKRERLLSHLSKQKELIKQYNPKEDKKLTGDPFRTLFVAGISYDTTEKKLKRE 117
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
F+ YG IK++ +++++ GKPRGY FIE+E++RDM AYK+ADGKKIDGRRVLVDVER+R
Sbjct: 118 FDQYGSIKRVRLIYDR-NGKPRGYGFIEFENDRDMKEAYKNADGKKIDGRRVLVDVERAR 176
Query: 182 TVKGWLPRRLGGGLG 196
TV GWLPRRLGGG G
Sbjct: 177 TVPGWLPRRLGGGRG 191
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 137/195 (70%), Gaps = 12/195 (6%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTH--GYSGIAAFLNEFEDPKDTPPPTR-VET 61
+PP++LALF R PP++ P KK H GY G+A ++N+FE PPPT ET
Sbjct: 6 MPPHILALFQAR------PPLDPFPAFKKKHTRGYVGLADYVNKFES--GPPPPTVPYET 57
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++RL R++R R K ++ I ++P T DPF+TLF+ ++YDT+E KL+RE
Sbjct: 58 PKQRLLRQKRARLLSHLSKQKELIKQYNPKEDKKLTGDPFRTLFVGGISYDTTEKKLKRE 117
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YG IK++ +++++ GKPRGY FIE+E++RDM AYK+ADGKKIDGRRVLVDVER+R
Sbjct: 118 FEQYGSIKRVRLIYDR-NGKPRGYGFIEFENDRDMKEAYKNADGKKIDGRRVLVDVERAR 176
Query: 182 TVKGWLPRRLGGGLG 196
TV GWLPRRLGGG G
Sbjct: 177 TVPGWLPRRLGGGRG 191
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 145/221 (65%), Gaps = 7/221 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
L P+LLALF PR PV Y+P K KKT +G+AA++++F DP D PPP E +E
Sbjct: 96 LTPSLLALFVPRPPVEYMPAPAK---PKKTQPMTGVAAYVDKFTDPADDPPPAPKEKKET 152
Query: 65 RLE---RRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRR 120
+ E RRR E+ A LE+ I WDP P A DP+KTLF+ R++YD ESKLRR
Sbjct: 153 KEEKKLRRRMAAEERNARALEEAIEKWDPKEDPKAKDSDPYKTLFVGRLSYDVDESKLRR 212
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE +GP+K + +V + TGKPRGYAFIEY E DM +AYK ADG++I+ +RV+VD ER
Sbjct: 213 EFEQWGPVKSVRVVEDVETGKPRGYAFIEYNRESDMKTAYKQADGRRIENKRVVVDAERG 272
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
RTV W PRRLGGGLG TR+G N SGR+ R+R
Sbjct: 273 RTVPDWKPRRLGGGLGRTRKGAKHENSLVSGRDQAYHSRDR 313
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 10/202 (4%)
Query: 4 FLPPNLLALFAPRDPVPYLPPVEK--LPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVET 61
LPP+L +F PR P+ + PP+ K P+ +G+ + + FE P ET
Sbjct: 23 MLPPDLKPMFDPRPPLLWKPPINKRVAPY------VTGLVKYKDVFEKIPPPPI-IPYET 75
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
++R R R + + K+E+EI W+P PNAT D +KTLF+A ++YDTSE KLRRE
Sbjct: 76 PKQRHARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRRE 135
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
FE YG IKKI +V N + +PRGYAFIEYE E DMH AYK ADG+K+D RR+LVDVER R
Sbjct: 136 FEQYGQIKKIRLV-NDLEDQPRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDVERGR 194
Query: 182 TVKGWLPRRLGGGLGGTRRGGP 203
TV+ W PRR GGGLG +R+ P
Sbjct: 195 TVRNWRPRRFGGGLGESRKTKP 216
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP+LL LFAPR +PY+P + P K Y+ +++FL D P E
Sbjct: 1 MTSQLPPSLLRLFAPRPALPYMPALAD-PKTKTAPIYTSVSSFLPLCRMGHD-PDYIATE 58
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T E+R +R E+A + A L++ I WDP+ NAT +P+KTLF++R+++DT+E L+
Sbjct: 59 TMEDRKKRLAAEKAAKTAAALQEAIDAWDPHKDENATAEPYKTLFVSRLSFDTTEKTLKH 118
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE +G +K + +V + TGKPRGYAFIE+EHERDM AYK A+G KIDGRR+LVDVER
Sbjct: 119 EFEAFGEVKSVSIVKDLKTGKPRGYAFIEFEHERDMKIAYKDAEGLKIDGRRILVDVERG 178
Query: 181 RTVKGWLP 188
RTV GW P
Sbjct: 179 RTVPGWKP 186
>gi|307103245|gb|EFN51507.1| hypothetical protein CHLNCDRAFT_140193 [Chlorella variabilis]
Length = 277
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 146/245 (59%), Gaps = 33/245 (13%)
Query: 37 YSGIAAFLNEFEDPKD----------------------TPPPTRV--ETREERLERRRRE 72
Y+GIA +++ F + D P RV E++ E+ R R+E
Sbjct: 32 YTGIAQYVSHFVERGDPEYEPPPPETQPPPPRIFRNPEMPTQARVDIESKVEKDIRVRQE 91
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
R ++ A + E+ + WDP+ PN DPFKTLF++R++YD +E KL+REFE YGPIK+I
Sbjct: 92 RQQRAARQREENLKSWDPSKDPNVEGDPFKTLFVSRLSYDVTERKLKREFEEYGPIKRIR 151
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
+VHNK +GKPRGYAFIEYEH+ DM AYK ADG+KI+ RRVLVDVER RTV W PRR G
Sbjct: 152 LVHNKNSGKPRGYAFIEYEHKNDMKQAYKMADGRKIEDRRVLVDVERGRTVPHWRPRRFG 211
Query: 193 GGLGGTRR--GGPDVNLKHSGREDNERERERYRLERERELAGGPPRARS----GSNDRER 246
GG G R P +LK R+ R ER E+ER G R R G+ DR+R
Sbjct: 212 GGKGSESRMVSRPPKDLK---RQFVARLVERAMAEKERRSDTGDRRKRERDDYGTYDRQR 268
Query: 247 ERERR 251
+ +RR
Sbjct: 269 DSKRR 273
>gi|388857223|emb|CCF49236.1| related to SNP1-U1 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 364
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 132/234 (56%), Gaps = 38/234 (16%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEK-------LPHEKKTHGYS------------GIA 41
MT LPP+L+ LFAPR P+ Y+ P+ + P K S G+A
Sbjct: 1 MTHLLPPSLIRLFAPRPPLEYVAPISRHDRNPAATPLTKDASLLSSSHRRRIRTPLTGVA 60
Query: 42 AFLNEFEDPKDTPPP------TRVETREERLERR---------RRERAEQVAYKLEQEIA 86
A + DT VET L + RAE+ A K + +
Sbjct: 61 ATVERIAS--DTAAAGTSTDDIAVETSTSNLTHAPVTLTEIAAEKTRAEKAAIK-TKGLE 117
Query: 87 LWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
+ PN NAT DP+KTLF+AR++YDT+E L R+FEVYGPI++I ++ NK GK RGYA
Sbjct: 118 TYKPNQNANATADPYKTLFLARLSYDTTEKDLHRQFEVYGPIQQITLIRNK-QGKSRGYA 176
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
FI YE ERDM +AYK A+G KI+GRRV+VDVER RTVK W P RLGGGLGG R
Sbjct: 177 FIAYESERDMKAAYKDAEGIKINGRRVMVDVERGRTVKDWKPTRLGGGLGGNAR 230
>gi|167517869|ref|XP_001743275.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778374|gb|EDQ91989.1| predicted protein [Monosiga brevicollis MX1]
Length = 383
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 128/199 (64%), Gaps = 11/199 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLP--HEKKTHG-YSGIAAFLNEFEDPKDTPPPT 57
MT FLPP L LF P P+ ++P E E+K + +GI+A+L++FE T PP
Sbjct: 1 MTAFLPPYLRDLFEPGPPIKHVPAAELQVENFERKYNAPLTGISAYLDQFET---TAPPP 57
Query: 58 RV----ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDT 113
RV ETRE R +R+ +E E+ +L + W P P AT DPFKTLF+ R++Y
Sbjct: 58 RVGQFLETREARKQRKAKEAIERQEPQLSAALEAWKPKENPKATSDPFKTLFVGRLSYAL 117
Query: 114 SESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
E L++EF YGP+K + +V + GK RGYAFIE+EHE D+ +AYK+ DG+KI+GRRV
Sbjct: 118 DEEVLKKEFSTYGPVKDVSLVRD-ADGKSRGYAFIEFEHENDLKAAYKYGDGRKIEGRRV 176
Query: 174 LVDVERSRTVKGWLPRRLG 192
+VDVER RTV W PRRLG
Sbjct: 177 VVDVERGRTVDDWKPRRLG 195
>gi|328858676|gb|EGG07788.1| hypothetical protein MELLADRAFT_35320 [Melampsora larici-populina
98AG31]
Length = 203
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 133/199 (66%), Gaps = 18/199 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLP----HEKKTHGYSGI-------AAFLNEFEDP 50
T LPPNLL LFAPR P+PY P+ + P H+K S + AA +NE E
Sbjct: 4 THLLPPNLLKLFAPRAPLPYCKPLGRDPDVSIHKKHITCVSPLLDQLKLDAATINEDETL 63
Query: 51 KDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVN 110
D+ + E R+E +R+ E+A + QE +DP PNAT DP++TLFI+R++
Sbjct: 64 TDSMQ-VQFERRQEDRIKRKEEKASR------QETCGYDPKEDPNATGDPYRTLFISRLS 116
Query: 111 YDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 170
++ +ES L++EF++YGPI+K+++V NK+TGK RGYAFI +E E+DM +AYK A+G KI G
Sbjct: 117 FEATESDLKKEFDMYGPIEKLLIVKNKLTGKSRGYAFILFEREKDMKAAYKDAEGLKIKG 176
Query: 171 RRVLVDVERSRTVKGWLPR 189
RR+LVDVER RTVKGW PR
Sbjct: 177 RRILVDVERGRTVKGWKPR 195
>gi|389584381|dbj|GAB67113.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium cynomolgi
strain B]
Length = 494
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 132/192 (68%), Gaps = 6/192 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+PP++L LF R + + P++K KK YSGI+ +LN FED K+ PP ++E +E
Sbjct: 6 MPPHILILFQARPLLSFYKPIQK----KKHQAYSGISEYLNLFED-KEPPPKIKLENAKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R ER+++E+ L++ +DP + T DP KT+FI R++YD +E KL++EFEV
Sbjct: 61 RKERKKKEKITYNELMLKEMRKNYDPFKNEDLTNDPKKTIFIGRLSYDVNEKKLKKEFEV 120
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IKK+ ++++K KP+GYAFIE+EH + + AY ADGKKID RR+LVDVER RTVK
Sbjct: 121 YGKIKKVKIIYDK-NFKPKGYAFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERGRTVK 179
Query: 185 GWLPRRLGGGLG 196
W+PRRLGGG G
Sbjct: 180 NWIPRRLGGGKG 191
>gi|221057416|ref|XP_002261216.1| U1 small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|194247221|emb|CAQ40621.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 412
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+PP++L LF R P+ + P++K HE YSGI+ ++N FED K+ PP ++E +E
Sbjct: 6 MPPHILILFHARPPLTFYKPIQKKKHE----AYSGISEYVNLFED-KEPPPKIKLENAKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R ER+++E+ L++ +DP + T DP KT+FI R++YD +E KL++EFEV
Sbjct: 61 RKERKKKEKITYNELMLKEMRKNYDPFKNVDLTEDPKKTIFIGRLSYDVNEKKLKKEFEV 120
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IKK+ ++++K KP+GY FIE+EH + + AY ADGKKID RR+LVDVER+RTVK
Sbjct: 121 YGKIKKVKIIYDK-NFKPKGYGFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERARTVK 179
Query: 185 GWLPRRLGGGLG 196
W+PRRLGGG G
Sbjct: 180 NWIPRRLGGGKG 191
>gi|428186025|gb|EKX54876.1| hypothetical protein GUITHDRAFT_45393, partial [Guillardia theta
CCMP2712]
Length = 200
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 134/199 (67%), Gaps = 5/199 (2%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR----VE 60
+ P++ ALFAPR P+ + P + +K+ Y GIA L+ FE P + + +E
Sbjct: 3 IVPHINALFAPRPPLEFKQPYSQQVGKKRKLPYEGIAKCLDSFETPDEYEENFKKFKPIE 62
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
R+ER ER ER ++ + A WDP+S+ + D +KTLF+ R+++ T E KL+R
Sbjct: 63 QRKERRERIAEERKTLSQDTVKAKAAAWDPSSYSFES-DAYKTLFVGRLSFMTDEHKLKR 121
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
E E YGP+K V+V++K T KPRGY F+E+EHERDM +AYKHADG+KIDGRR+LVDVER
Sbjct: 122 EMEQYGPVKSAVLVYDKDTSKPRGYGFVEFEHERDMKTAYKHADGRKIDGRRILVDVERG 181
Query: 181 RTVKGWLPRRLGGGLGGTR 199
RTVK W PR++GGGLG +R
Sbjct: 182 RTVKDWKPRKIGGGLGSSR 200
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 133/220 (60%), Gaps = 28/220 (12%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFE---DPKDTPPPTRVET 61
LPP LL+LF PR +P + V+K K Y+G+AA++ EF DP PP
Sbjct: 33 LPPQLLSLFNPRAQLPLVTDVKK---PKIKLPYTGLAAYVKEFAGEGDPDYQPPRNEDRP 89
Query: 62 REERLERRRRERAEQ---VAYKLEQEIAL------------------WDPNSFPNATMDP 100
RL R R A+ K+E++I L +DPN P DP
Sbjct: 90 PSPRLFRNRELAAQARVDTETKIEKKIRLTKWKLEEAEREAREKSKTFDPNKDPKIEGDP 149
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+KT+ +AR++YD ++ KLRREFE +GPIK++ +V +K GKPRGYAFIE+EH+ DM AY
Sbjct: 150 YKTIIVARLSYDVTDKKLRREFEEFGPIKRVRIVTDK-QGKPRGYAFIEFEHKADMKEAY 208
Query: 161 KHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
K ADGKKI+GRRVLVDVER RTV+ W PRRLGGGLG R
Sbjct: 209 KAADGKKIEGRRVLVDVERGRTVENWKPRRLGGGLGAPGR 248
>gi|323455541|gb|EGB11409.1| hypothetical protein AURANDRAFT_14747, partial [Aureococcus
anophagefferens]
Length = 215
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 135/218 (61%), Gaps = 26/218 (11%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPP-PTRVETRE 63
LPP + A+F P P+ + EK+ + T Y+G+AA+ + FE PP P + ET
Sbjct: 1 LPPAMKAMFQPGPPLLFR---EKISKRRPTP-YTGVAAYRDLFE--TTAPPEPEKNETPR 54
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNA-----TMDPFKTLFIARVNYDTSESKL 118
ER + + E+AE +L +A WDP P+A T D +KTLF+AR++YDT+E KL
Sbjct: 55 ERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKL 114
Query: 119 RREFEVYGPIKKIVMVHNK--------------VTGKPRGYAFIEYEHERDMHSAYKHAD 164
RREFE +G IK + +VH + G PRGYAF+E+E E DM AYK AD
Sbjct: 115 RREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRAD 174
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGG 202
G+KIDGRRVLVDVER RTV+ W PR+LGGGLG TR+ G
Sbjct: 175 GRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRKRG 212
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 28/220 (12%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFE---DPK-------DTP 54
LPP LL LF+PR LP + L K Y+G+A+++ EF DP+ D P
Sbjct: 33 LPPPLLTLFSPRQ---QLPLADGLKKAKINQKYTGMASYVKEFASEGDPEYQPPRNPDCP 89
Query: 55 PPTRV--------------ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP 100
P R+ ET+ E+ R + + E+ + ++ +DPN P DP
Sbjct: 90 PSPRLFRNPELRIQSRVETETKTEKKIRLTKWKLEEAEREAKERAKTFDPNKDPKIEGDP 149
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+KT+ +AR+++D +E KLRREFE YGP+K++ +V +K GK RGYAF+EYEH+ DM AY
Sbjct: 150 YKTILVARLSFDVTEKKLRREFEEYGPVKRVRLVMDK-NGKSRGYAFVEYEHKADMKEAY 208
Query: 161 KHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
K ADGKKI+GRRVLVDVER RTV+ W PRRLGGGLG R
Sbjct: 209 KAADGKKIEGRRVLVDVERGRTVENWKPRRLGGGLGAPGR 248
>gi|315042121|ref|XP_003170437.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
gi|311345471|gb|EFR04674.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
Length = 405
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YL P+ + P + K+ SG+A +L+E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYLQPISRAPDDVKSSTISGVAGYLDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ EQ A +LE+ ++ ++P+ P DPF+TLF++R++YD E+ L R
Sbjct: 61 SWLQRKDRLKMEKQEQAAKRLEEGLSTFNPSEDPQIRGDPFRTLFVSRLSYDVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E+DM +AYK DG +I RR LVD
Sbjct: 121 EFGRFGPIERIRIVKDTQNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|71030936|ref|XP_765110.1| U1 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352066|gb|EAN32827.1| U1 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 227
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 137/209 (65%), Gaps = 17/209 (8%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR-VETRE 63
+PP+LL LF R P+ ++ P+ P G+A FL+ F+ +TPP ET
Sbjct: 6 MPPHLLVLFQARPPLQHVDPLPSKP----VRQIDGLAGFLDSFD--AETPPKKEPFETPR 59
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNA---------TMDPFKTLFIARVNYDTS 114
+R ++R+RE + +L++ + +DP+ P T DP++TLF+A + YD +
Sbjct: 60 QRRDKRKRETLLKYKEELKKRASEYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVT 119
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
E +L +EF+ YG I+++ M+H++ + KPRGYAFIEYE+ERDM +AYK ADGKKI GRRV+
Sbjct: 120 EKQLSKEFQTYGKIRRVRMIHDR-SNKPRGYAFIEYENERDMVTAYKRADGKKISGRRVI 178
Query: 175 VDVERSRTVKGWLPRRLGGGLGGTRRGGP 203
VDVER+RTV+GWLPRRLGGG G +R P
Sbjct: 179 VDVERARTVEGWLPRRLGGGKGKSRGAPP 207
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 129/226 (57%), Gaps = 39/226 (17%)
Query: 5 LPPNLLALFAPRDP------VPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK------- 51
LP LL LF P P +P PP KLP Y GIA + F +P
Sbjct: 35 LPKKLLELFEPLPPPARLTDIPKRPP--KLP-------YLGIAQHVALFAEPGDEEYEPP 85
Query: 52 ---------------DTPPPTRV--ETREERLERRRRERAEQVAYKLEQEIALWDPNSFP 94
+ RV ET+ E+ R ++ +E+ + +WDP P
Sbjct: 86 PEVPRPPSPRRFRNPEMTAQARVDYETKAEKKTRVSTQKIAGAKESIEEGLKIWDPAKDP 145
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
A DPFKTLF+ARV+YD +E KL+REFE YGP+K++ +V K +GKPRGYAF+E+EH+
Sbjct: 146 LAEGDPFKTLFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKN 205
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
DM +AYK ADG+KI+GRRV+VDVER RTV W PRRLGGG GG R
Sbjct: 206 DMKTAYKMADGRKIEGRRVVVDVERGRTVPNWRPRRLGGGKGGESR 251
>gi|296416697|ref|XP_002838011.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633906|emb|CAZ82202.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LP NLLALFAPR P+ YLP + P +++T +G+AA+L P PT E
Sbjct: 1 MTDKLPANLLALFAPRPPLRYLPHCDYAPDKRRTAPITGVAAYLETLRTPDPDYVPT--E 58
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R R E+ +A K + + ++P P DPFKTLF++R+NY+ E L R
Sbjct: 59 SWMQRRDRLREEKKAAIAEKTKAALVQYNPEHDPQVRGDPFKTLFLSRLNYNVKEPDLER 118
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF +GPI++I +V +K TGK RGYAFI YE E+DM +AYK DG +I RRVLVDVER
Sbjct: 119 EFGRFGPIERIRIVRDKETGKHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDVERG 178
Query: 181 RTVKGWLPR 189
RTVKGW PR
Sbjct: 179 RTVKGWKPR 187
>gi|119478256|ref|XP_001259339.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
gi|119407493|gb|EAW17442.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
Length = 382
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 125/193 (64%), Gaps = 5/193 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+PP+++ P + K G+A FL E + + P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVPPIDRAPEDVKKSSIGGVADFLGELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ E++ +L + + +DP++ P A DPFKTLF+AR++YD ES L R
Sbjct: 61 SWLQRKWRQKLEKKERLNKQLTECLQSYDPSNDPQARGDPFKTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
EF +GPI++I +V + VT K RGYAFI YE E+DM +AYK DG +I RRVLV
Sbjct: 121 EFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 180
Query: 176 DVERSRTVKGWLP 188
DVER RTVKGW P
Sbjct: 181 DVERGRTVKGWKP 193
>gi|327292644|ref|XP_003231020.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326466826|gb|EGD92279.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 405
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YL P+ + P + K SG+A +L+E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ EQ +LE+ +A ++P+ P DPF+TLF++R++YD E+ L R
Sbjct: 61 SWLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E+DM +AYK DG +I RR LVD
Sbjct: 121 EFGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|156101519|ref|XP_001616453.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium vivax Sal-1]
gi|148805327|gb|EDL46726.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Plasmodium
vivax]
Length = 452
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 131/192 (68%), Gaps = 6/192 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+PP++L LF R + + P++K KK YSGI+ +LN FED K+ PP ++E +E
Sbjct: 6 MPPHILILFQARPLLSFYKPIQK----KKPQAYSGISEYLNLFED-KEPPPKIKLENAKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R ER+++E+ L++ +DP + T DP KT+FI R++YD +E KL++EFEV
Sbjct: 61 RKERKKKEKITYNELMLKEMRKSYDPFKNADLTNDPKKTIFIGRLSYDVNEKKLKKEFEV 120
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IKK+ ++++K KP+GY FIE+EH + + AY ADGKKID RR+LVDVER RTVK
Sbjct: 121 YGKIKKVKIIYDK-NFKPKGYGFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERGRTVK 179
Query: 185 GWLPRRLGGGLG 196
W+PRRLGGG G
Sbjct: 180 NWIPRRLGGGKG 191
>gi|326480343|gb|EGE04353.1| U1 small nuclear ribonucleoprotein [Trichophyton equinum CBS
127.97]
Length = 406
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YL P+ + P + K SG+A +L+E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ EQ +LE+ +A ++P+ P DPF+TLF++R++YD E+ L R
Sbjct: 61 SWLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E+DM +AYK DG +I RR LVD
Sbjct: 121 EFGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|84994904|ref|XP_952174.1| U1 small nuclear ribonucleoprotein 70 kDa [Theileria annulata
strain Ankara]
gi|65302335|emb|CAI74442.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Theileria
annulata]
Length = 227
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 137/209 (65%), Gaps = 17/209 (8%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR-VETRE 63
+PP+LL LF R P+ ++ P+ P + G+ FL+ F +TPP ET
Sbjct: 6 MPPHLLVLFQARPPLQHVDPLPSKPIRQ----IDGLCGFLDSFNS--ETPPKKEPFETPR 59
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNA---------TMDPFKTLFIARVNYDTS 114
+R ++R+RER + +L+++ + +DP+ P T DP++TLF+A + YD +
Sbjct: 60 QRRDKRKRERLLKYKEELKKKASQYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVT 119
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
E +L +EF+ YG I+++ M+H++ + KPRGYAFIEYE ERDM +AYK ADG+KI GRRV+
Sbjct: 120 EKQLSKEFQTYGKIRRVRMIHDR-SNKPRGYAFIEYESERDMVTAYKRADGRKISGRRVI 178
Query: 175 VDVERSRTVKGWLPRRLGGGLGGTRRGGP 203
VDVER+RTV+GWLPRRLGGG G +R P
Sbjct: 179 VDVERARTVEGWLPRRLGGGKGKSRGAPP 207
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 106/135 (78%), Gaps = 2/135 (1%)
Query: 80 KLEQEIALWDPNS-FPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKV 138
+++++ A WDPN+ P T D +KTLF+ R++Y+T+E +LR EFE YGP+K + +V +
Sbjct: 7 QMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDP- 65
Query: 139 TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGT 198
GK RGY F+EYE E DM +AYK+ADGKKIDGRRV+VDVER RTV+ WLPR+ GGG+ T
Sbjct: 66 EGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGISET 125
Query: 199 RRGGPDVNLKHSGRE 213
R+GG DVN+K+SGRE
Sbjct: 126 RKGGADVNVKYSGRE 140
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 11/202 (5%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEFEDPKD----------TP 54
PP + ALF P PV +LPP++ +K H +GI+ F+++FE + T
Sbjct: 1 PPQIQALFTPGPPVSFLPPLDAKRRKKTKHRDLNGISEFVDKFEQEQVEYDAEGQAIRTK 60
Query: 55 PPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTS 114
+ E+R +R E R++++A +V + + + WDPN+ AT +PF TLFI+++NY+T+
Sbjct: 61 KYSMPESRRKRKESRQKDKAIKVENVVRKGLQDWDPNNDTKATTEPFNTLFISKMNYETT 120
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
E LR F +GPIK + +V + T K RGYAF+E+E DM AYK DG +ID RVL
Sbjct: 121 EDTLRNAFGKFGPIKTVRVVRDASTNKSRGYAFVEFEKHEDMKEAYKLGDGMEIDQWRVL 180
Query: 175 VDVERSRTVKGWLPRRLGGGLG 196
VDVER RTVK W PRRLGGGLG
Sbjct: 181 VDVERGRTVKDWKPRRLGGGLG 202
>gi|119174818|ref|XP_001239737.1| hypothetical protein CIMG_09358 [Coccidioides immitis RS]
gi|303314545|ref|XP_003067281.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106949|gb|EER25136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037587|gb|EFW19524.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869929|gb|EAS28470.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 395
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LP NLLALFAPR P+ YL P+++ P + + +G+A F+ E ++ + P E
Sbjct: 1 MTDKLPANLLALFAPRPPLKYLKPIDRAPEDVRQSDLTGVAQFVGELQNYAEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R+++E+ E++ L + + +DP+S P DPFKTLF++R++YD E+ L R
Sbjct: 61 SWLQRKARQKQEKKEELDKYLTEGLKTYDPSSDPQVRGDPFKTLFVSRLSYDVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E DM +AYK DG +I RRVLVD
Sbjct: 121 EFGRFGPIERIRIVTDPSNTNPKKKHRGYAFIVYERELDMKAAYKETDGIRIKDRRVLVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|403222137|dbj|BAM40269.1| U1 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 222
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 135/211 (63%), Gaps = 21/211 (9%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF---EDPKDTPPPTRVET 61
+PP+LL LF R P L V+ LP+ K GI+ FL+ F E PK P ET
Sbjct: 6 MPPHLLVLFQARPP---LERVDPLPN-KPVRQIDGISDFLDSFSKEEPPKKEP----FET 57
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNA---------TMDPFKTLFIARVNYD 112
+R ++R+RER + +L++ + +DP P T DP++TLF+A + Y+
Sbjct: 58 PRQRRDKRKRERLIRYEEELKRRVESYDPKYDPRLARGGTSSWLTHDPYRTLFVANIAYE 117
Query: 113 TSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
+E +L +EFEVYG I+++ M+H++ KPRGYAFIE+E ERDM AYK DGKKI GRR
Sbjct: 118 VTERQLCKEFEVYGKIRRVRMIHDR-KNKPRGYAFIEFESERDMVLAYKRGDGKKISGRR 176
Query: 173 VLVDVERSRTVKGWLPRRLGGGLGGTRRGGP 203
V+VDVER+RTV+GWLPRRLGGG G +RR P
Sbjct: 177 VIVDVERARTVEGWLPRRLGGGKGRSRRAPP 207
>gi|209877242|ref|XP_002140063.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555669|gb|EEA05714.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 294
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 10/196 (5%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
LP +LL F R P+PY+P V+ PH K Y GIA ++ E D P + E
Sbjct: 6 LPEDLLCYFQARPPLPYIPNVKTKPHRK----YEGIADLIHNIEGIFDKGLPPIIIPFES 61
Query: 65 RLERRRRERAEQVA-YKLEQEIAL--WDP-NSFPNATMDPFKTLFIARVNYDTSESKLRR 120
E+R + RA ++A Y E +I + +DP N+ + T DP+ TLF+ R++YDT+E LR+
Sbjct: 62 PREKREKLRAIKLATYNEELQIKIREYDPRNTSSDMTDDPYNTLFVGRLSYDTTERTLRK 121
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE YGPIKKI ++ + + G+ +GYAFIEYE E + AY++++ K IDGR+V+VDVER
Sbjct: 122 EFETYGPIKKICLITD-LNGQSKGYAFIEYESESSLKEAYRYSN-KVIDGRKVIVDVERG 179
Query: 181 RTVKGWLPRRLGGGLG 196
RTV+ WLPRRLGGG G
Sbjct: 180 RTVENWLPRRLGGGKG 195
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL------NEFEDPKDTPP 55
Q + + A+F P P+ + V K +K G+AA L N FE K PP
Sbjct: 20 IQMMEGAMRAMFEPPPPLEFKKSVCK----RKPPTVEGVAAMLKGKGAANLFE--KGVPP 73
Query: 56 PTRVETREERLERRRRERAEQVAYK-------LEQEIALWDPNSFPNATMDPFKTLFIAR 108
P E+ E R++ A A K L+ +I+ W+P P D +KTLFIA+
Sbjct: 74 PP------EKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAK 127
Query: 109 VNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKI 168
++YDT+E KLRREFE +G I+ I MV ++ GKPRGYAF+EYE+E DM AYK DG+KI
Sbjct: 128 ISYDTTEKKLRREFEQFGRIQSIRMVQDE-DGKPRGYAFVEYENEDDMRVAYKRGDGRKI 186
Query: 169 DGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
DGRRVLVDVER RTV+ WLPRR GGGLG +R+
Sbjct: 187 DGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 218
>gi|212529894|ref|XP_002145104.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
gi|210074502|gb|EEA28589.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
Length = 382
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + K SG+AA L E ++ + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPSDRAPDDCKKSTISGVAALLGELKNYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ E++ + + + +DP + DPF+TLF+AR++YD ES L R
Sbjct: 61 SWLQRRARQKLEKKERLERLITEGVEKYDPATDAQIRGDPFRTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E+DM +AYK DG +I RRVLVD
Sbjct: 121 EFGRFGPIERIRIVKDSENPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|121714030|ref|XP_001274626.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
gi|119402779|gb|EAW13200.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
Length = 377
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+ P+++ P + K GIA +L E ++ ++ P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVHPIDRAPEDVKKSTIGGIAQYLGEVKNYEEEIPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ E++ +L + + ++DP++ A DPF+TLF+AR++YD E+ L R
Sbjct: 61 SWLQRKWRQKLEQKEKLGKQLTESLQVYDPSNDSQARGDPFRTLFVARLSYDVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
EF +GPI+++ V K + KP RGYAFI YE E+DM +AYK DG +I RRVLVDVER
Sbjct: 121 EFGRFGPIERVHTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDVER 180
Query: 180 SRTVKGWLP 188
RTVKGW P
Sbjct: 181 GRTVKGWKP 189
>gi|156085230|ref|XP_001610098.1| u1 snRNP [Babesia bovis T2Bo]
gi|154797350|gb|EDO06530.1| u1 snRNP, putative [Babesia bovis]
Length = 247
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 135/208 (64%), Gaps = 15/208 (7%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+PP+LL LF R P+ Y+PP+E +K ++GIA ++ F + PP ET +
Sbjct: 6 MPPHLLVLFQARPPLEYIPPIENGMKKK----FNGIADYVGYFSK-EQVPPDPPFETPHQ 60
Query: 65 RLERRRRER---------AEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSE 115
R ++++RER AE+ AY + + AL + P T DP+KTLF++ + Y+ +E
Sbjct: 61 RADKKKRERIIEHHKKQKAERDAYDPKYDPALARGATNPWLTHDPYKTLFVSNIPYEVTE 120
Query: 116 SKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
+L +EF+VYG +++I M++++ PRGYAFIEY ERDM +AYK ADG+K+ GRRVLV
Sbjct: 121 KQLWKEFDVYGRVRRIRMINDR-KNIPRGYAFIEYNDERDMVNAYKRADGRKVSGRRVLV 179
Query: 176 DVERSRTVKGWLPRRLGGGLGGTRRGGP 203
DVER+RTV GW P+RLGGG G +R P
Sbjct: 180 DVERARTVAGWYPKRLGGGKGRSRTKPP 207
>gi|149055934|gb|EDM07365.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_d [Rattus norvegicus]
Length = 148
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 111/131 (84%), Gaps = 1/131 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKLR
Sbjct: 61 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR 120
Query: 120 REFEVYGPIKK 130
REFEVYGPIK+
Sbjct: 121 REFEVYGPIKR 131
>gi|169779457|ref|XP_001824193.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus oryzae
RIB40]
gi|238500103|ref|XP_002381286.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|83772932|dbj|BAE63060.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693039|gb|EED49385.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|391870271|gb|EIT79456.1| U1 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 379
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 125/193 (64%), Gaps = 5/193 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+ P+++ P + K G+A +L + ++ ++ P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVTPIDRAPEDCKKSTLGGVAQYLPDLKEYEEEYPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R+++E+ E + L + I +DP++ P A DPFKTLF++R++YD ES L R
Sbjct: 61 SWIQRKLRQKQEKKENIEKHLTEGIHTFDPSNDPQARGDPFKTLFVSRLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
EF +GPI++I +V + VT K RGYAFI YE E+DM +AYK DG +I RRVLV
Sbjct: 121 EFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 180
Query: 176 DVERSRTVKGWLP 188
DVER RTVKGW P
Sbjct: 181 DVERGRTVKGWKP 193
>gi|295670647|ref|XP_002795871.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284956|gb|EEH40522.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 409
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P +K+ +G+A F++E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + ER ++ L + I ++PN+ P D FKTLF++R++YD E+ L R
Sbjct: 61 SWLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLER 120
Query: 121 EFEVYGPIKKIVMV---HN--KVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V HN K KP RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKKNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|145249558|ref|XP_001401118.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus niger CBS
513.88]
gi|134081800|emb|CAK42056.1| unnamed protein product [Aspergillus niger]
gi|350639553|gb|EHA27907.1| hypothetical protein ASPNIDRAFT_201684 [Aspergillus niger ATCC
1015]
Length = 389
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 5/193 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+ P+ + P + K GIA FL E + ++ P T E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVTPINRAPEDCKKSSIGGIAQFLPEVKKYEEEIPYTPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ E + +L + + ++P++ A DPFKTLF+AR++YD ES L R
Sbjct: 61 SWIQRKLRQKVEKKENINKQLTEGLETYEPSNDQQARGDPFKTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
EF +GPI++I +V + VT K RGYAFI YE E+DM +AYK DG +I RRVLV
Sbjct: 121 EFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 180
Query: 176 DVERSRTVKGWLP 188
DVER RTVKGW P
Sbjct: 181 DVERGRTVKGWKP 193
>gi|145347107|ref|XP_001418019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578247|gb|ABO96312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 131/215 (60%), Gaps = 10/215 (4%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR------ 58
L P+LL +FAPR P+ + P K KKT G+AA + EFE T R
Sbjct: 1 LSPDLLRMFAPRAPLKWCAPPAK---PKKTQRMQGVAACVKEFETASKTATQKRKAGVYV 57
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
V T+EER R+R + +E + + PN PNAT DP++TLFIAR+ YD E KL
Sbjct: 58 VVTKEERAARKRAAAERKSRELIEAGLDGYRPNENPNATSDPYRTLFIARLAYDVDEDKL 117
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RRE E YG + + +V ++ GK RGYAFIE+E E DM +AY+ D ++I+ RRV+ DVE
Sbjct: 118 RREAEYYGAVSDVKLVRDE-KGKSRGYAFIEFEREGDMRAAYRGMDDRRIEDRRVIADVE 176
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
R RT KGWLPRRLGGG+G TR G N++ GR+
Sbjct: 177 RGRTNKGWLPRRLGGGVGRTRAGSKRENVEARGRD 211
>gi|242761917|ref|XP_002340274.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
gi|218723470|gb|EED22887.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
Length = 381
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + K SG+A + E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPTDRAPDDCKKSTISGVAGLVGELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ E++ L + + +DP++ DPF+TLF+AR++YD ES L R
Sbjct: 61 SWLQRRARLKLEKKERMERLLTEGVEKYDPSNDAQIRGDPFRTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHN---KVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + + + KP RGYAFI YE E+DM +AYK DG +I RRVLVD
Sbjct: 121 EFGRFGPIERIRIVKDTEKQNSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|240275269|gb|EER38783.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 421
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + K G+A FL+E + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ + L + + ++PN+ P D FKTLF++R++YD +E+ L R
Sbjct: 61 SWLQRKARLKEEKKLNIERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLER 120
Query: 121 EFEVYGPIKKIVMV---HN--KVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V HN K KP RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|225561665|gb|EEH09945.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 423
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + K G+A FL+E + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ + L + + ++PN+ P D FKTLF++R++YD +E+ L R
Sbjct: 61 SWLQRKARLKEEKKLNIERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLER 120
Query: 121 EFEVYGPIKKIVMV---HN--KVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V HN K KP RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|330795602|ref|XP_003285861.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
gi|325084166|gb|EGC37600.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
Length = 419
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
Query: 4 FLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR--VET 61
FLPPNL +F PR P P P Y+G++++ + FEDP P R VE+
Sbjct: 3 FLPPNLKIMFTPRPPPP----FLPPPEPSNLPPYTGLSSYTSYFEDPSKEEPFKREIVES 58
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNA-TMDPFKTLFIARVNYDTSESKLRR 120
E+ E++R+ + + + + + WDP S P T DP+KT+F++R++Y T++ KL
Sbjct: 59 ATEKREKKRKAKEDANNERNAKHLKSWDPYSHPELHTGDPYKTIFVSRISYQTTQKKLEY 118
Query: 121 EFEVYGPIKKIVMVHN-KVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
EF +G IK I +V + K K RGYAFIE+E ERDM +AYK ADG KID RR+LVD+ER
Sbjct: 119 EFSQFGNIKSIYLVKDPKNPQKHRGYAFIEFERERDMKAAYKQADGMKIDDRRILVDIER 178
Query: 180 SRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
R +K W PR+ GGGLG TR GG DVN SGRE +E+
Sbjct: 179 GRVIKNWKPRKFGGGLGNTRAGGADVNQTFSGRELSEQ 216
>gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56526457|emb|CAH81463.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 373
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 153/270 (56%), Gaps = 27/270 (10%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
LPP++L LF R P L K +KK YSGI+ FLN FED K PP ++E+ +E
Sbjct: 6 LPPHILILFQSR---PLLD-FHKPIKKKKPKEYSGISDFLNYFEDGK-PPPKIKLESPKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R ER+++E+ L+++ +DP + + DP KTLFI R++Y+ +E KL++EFE
Sbjct: 61 RKERKQKEKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFET 120
Query: 125 YGPIK--KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
YG IK K++ NK KPRGYAFIE EH + + AY ADGKKI+ RR+LVD+ER+RT
Sbjct: 121 YGKIKYVKVICDQNK---KPRGYAFIE-EHTKSVTDAYNLADGKKIENRRILVDMERART 176
Query: 183 VKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYR--------------LERER 228
VK WLPRRLGGG G +R + H+ + +++YR L ER
Sbjct: 177 VKNWLPRRLGGGKGPSRGSDERKKMTHNVNWNALINKDKYRDDKRKHDDPYKNIPLYNER 236
Query: 229 ELAGGPPRARSGSNDRERERERRRSRSRER 258
G P S S D R RS R+R
Sbjct: 237 NDDG--PYGNSSSRDHRSHRGSERSSKRDR 264
>gi|358374136|dbj|GAA90730.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus kawachii IFO
4308]
Length = 390
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 5/193 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+ P+ + P + K GIA FL E + ++ P T E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVTPINRAPEDCKKSSIGGIAQFLPEVKKYEEEIPYTPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ E + +L + + ++P++ A DPFKTLF+AR++YD ES L R
Sbjct: 61 SWIQRKLRQKVEKKENINKQLTEGLESYEPSNDQQARGDPFKTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
EF +GPI++I +V + VT K RGYAFI YE E+DM +AYK DG +I RRVLV
Sbjct: 121 EFGRFGPIERIRIVKDIVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 180
Query: 176 DVERSRTVKGWLP 188
DVER RTVKGW P
Sbjct: 181 DVERGRTVKGWKP 193
>gi|296816264|ref|XP_002848469.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841494|gb|EEQ31156.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 414
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 120/192 (62%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YL P+ + P + K SG+A +L+E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ EQ +L + ++P+ P DPF+TLF++R++Y+ E+ L R
Sbjct: 61 SWLQRKDRLKMEKREQAEKRLAAGLTEYNPSEDPQIRGDPFRTLFVSRLSYEVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E+DM +AYK DG +I RR LVD
Sbjct: 121 EFGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVD 180
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 181 VERGRTVKGWKP 192
>gi|67541466|ref|XP_664507.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|40739112|gb|EAA58302.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|259480504|tpe|CBF71696.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa (AFU_orthologue;
AFUA_5G13480) [Aspergillus nidulans FGSC A4]
Length = 373
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 124/199 (62%), Gaps = 11/199 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ ++ P+++ P + K SG+A FL E + + E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRWVTPIDRAPDDIKKSKLSGVAQFLPEVKKTAEETEYNPAE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T +R R++ E+ EQ+ L + +A +DPNS P A DPFKTLF++R++Y+ +E L R
Sbjct: 61 TWLQRKLRQKAEKKEQLHKHLTEGLAAYDPNSDPQARGDPFKTLFVSRLSYEATEQDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMH------SAYKHADGKKID 169
EF +GPI++I +V + VT K RGYAFI YE E+DM +AYK DG +I
Sbjct: 121 EFGRFGPIERIRIVKDTVTPKGAKKPHRGYAFIVYEREKDMKDLIHKLAAYKETDGIRIK 180
Query: 170 GRRVLVDVERSRTVKGWLP 188
RRVLVDVER RTVKGW P
Sbjct: 181 DRRVLVDVERGRTVKGWKP 199
>gi|115399498|ref|XP_001215338.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192221|gb|EAU33921.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 5/193 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+ P+++ P + K GIA FL E + ++ P +
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVTPLDRAPDDVKKSTIGGIADFLPEIKKYEEEIPYNATD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ E++ +L + + +DP+ P A DPFKTLF+AR++YD ES L R
Sbjct: 61 SWIQRKWREKVEKKERLNKQLTEGLENFDPSKDPQARGDPFKTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
EF +GPI++I +V + VT K RGYAFI YE E+DM +AYK DG +I RRVLV
Sbjct: 121 EFGRFGPIERIRIVKDNVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 180
Query: 176 DVERSRTVKGWLP 188
DVER RTVKGW P
Sbjct: 181 DVERGRTVKGWKP 193
>gi|452986309|gb|EME86065.1| hypothetical protein MYCFIDRAFT_7010, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 203
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 124/206 (60%), Gaps = 12/206 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFED----PKDTPPP 56
MT LPPNLLALF PR P+ Y+PP + P +KT G+A FL E+ KD P
Sbjct: 1 MTDRLPPNLLALFQPRPPLRYMPPNDYAPENRKTATVDGVAQFLPALEEYKEEHKDDP-- 58
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIA-LWDPNSFPNATMDPFKTLFIARVNYDTSE 115
E+ ++ +R E+ E+ + +E + PN N D FKTLFI+R+ YD
Sbjct: 59 -VTESWLQKRDRETMEKQEKQKWLVEGGYKEFYKPNEDENIRGDAFKTLFISRLPYDVGT 117
Query: 116 SKLRREFEVYGPIKKIVMVHNKV----TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGR 171
L +EF +GPI++I +V ++ GKPRGYAFI +E E+DM +AYK +D I GR
Sbjct: 118 KDLEKEFGRFGPIERIRIVTDRGEGPKKGKPRGYAFILFEREKDMKAAYKESDALYIKGR 177
Query: 172 RVLVDVERSRTVKGWLPRRLGGGLGG 197
+VLVDVER RTV GW PRR GGG+GG
Sbjct: 178 KVLVDVERGRTVAGWRPRRFGGGMGG 203
>gi|213410617|ref|XP_002176078.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
gi|212004125|gb|EEB09785.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
Length = 270
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 128/191 (67%), Gaps = 2/191 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT+ LPPN+LALFAPR + YLPP + P E+ T SGIAA+L + + PT+
Sbjct: 1 MTEKLPPNILALFAPRPQLRYLPPTDVSPGERATPRVSGIAAYLQFAKTHDNDYKPTQ-S 59
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
E+RL R+ ++ + V KL + W+P+ N DP+KT+FI R++YDT ES++ R
Sbjct: 60 LEEQRLLRKEEKQRKHVE-KLREMRKRWNPDEDRNIVGDPYKTIFIGRLSYDTKESEIER 118
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF YGPI +I +V +K + KPRGYAF+ +E ERD+ +AY+ +D I+GR+V+VDVER
Sbjct: 119 EFIRYGPIDRIRIVRDKDSDKPRGYAFVVFERERDLKAAYRASDRLYINGRKVVVDVERG 178
Query: 181 RTVKGWLPRRL 191
RTVK W PRRL
Sbjct: 179 RTVKDWYPRRL 189
>gi|226295399|gb|EEH50819.1| hypothetical protein PADG_06898 [Paracoccidioides brasiliensis
Pb18]
Length = 417
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P +K+ +G+A F++E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + ER ++ L + I ++PN+ P D FKTLF++R++YD E+ L R
Sbjct: 61 SWLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP------RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V + K RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKKNPKKSHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 132/233 (56%), Gaps = 38/233 (16%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPV-------EKLPHEKKTHGYS----------GIAAF 43
MT LPP+L+ LFAPR P+ Y+ P+ +P K S G+A++
Sbjct: 1 MTHLLPPSLIRLFAPRPPLEYVAPIRRYDPDPNAVPLSKDGTQISRRKTIRTPLTGVASY 60
Query: 44 L----NEFED------------PKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIAL 87
L E D +R RE LE R +A LE
Sbjct: 61 LERVKQETADRGESTDDIALSSSSSALTLSRATLREIELESRAASKAATKQRGLET---- 116
Query: 88 WDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
+ P++ P+AT D +KTLF+AR++Y +ES L REF++YGPI++I ++ +K GK RGYAF
Sbjct: 117 YKPSNNPDATPDAYKTLFLARLDYSVTESDLHREFDMYGPIEQIKLIRDK-NGKSRGYAF 175
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
I YE ERDM +AYK A+G KI+GRRV+VDVER RTVK W P RLGGGLGG+ R
Sbjct: 176 IAYERERDMKAAYKDAEGIKINGRRVMVDVERGRTVKDWKPTRLGGGLGGSTR 228
>gi|258567044|ref|XP_002584266.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905712|gb|EEP80113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 397
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LP NLLALFAPR P+ YL P+++ P + + G+A FL E ++ + P E
Sbjct: 1 MTDKLPANLLALFAPRPPLKYLKPIDRAPEDTRPSDIGGVAQFLGELQNYAEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ EQ+ + + + +DPNS P DPF+TLF++R++YD ES L R
Sbjct: 61 SWLQRKARQKLEKKEQLERYITEGLEKYDPNSDPQVRGDPFRTLFVSRLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + P RGYAFI YE E+DM K DG +I RRVLVD
Sbjct: 121 EFGRFGPIERIRIVTDPSNTNPKKKHRGYAFIVYEREQDM----KETDGIRIKDRRVLVD 176
Query: 177 VERSRTVKGWLP 188
VER RTVKGW P
Sbjct: 177 VERGRTVKGWKP 188
>gi|388580661|gb|EIM20974.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 127/204 (62%), Gaps = 15/204 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LP NLL LFAPR P+PY P+E+ P K++ SGI L+ ++ ++ +
Sbjct: 1 MTHLLPANLLKLFAPRPPLPYAKPLERDPTRSKSNAQSGIGEILHSLKEEQEDRRAKQNG 60
Query: 61 TREERLER---------------RRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLF 105
+E +E R+ ER ++ ++ + + P A DPFKTLF
Sbjct: 61 ILDEDIESNDLQVKLAEVYQVAIRKAERQKKRQENFKRALEHYKPTEDIEAIGDPFKTLF 120
Query: 106 IARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADG 165
IAR++ +T+ES LR+EFEVYGPI+++ +V +K TGK RGYAF+ +E ERDM +AYK A+G
Sbjct: 121 IARLSVETTESDLRKEFEVYGPIERVRIVRHKDTGKSRGYAFLIFEKERDMKAAYKDAEG 180
Query: 166 KKIDGRRVLVDVERSRTVKGWLPR 189
KI G+R+LVDVER RTVKGW PR
Sbjct: 181 LKIHGKRILVDVERGRTVKGWKPR 204
>gi|429327719|gb|AFZ79479.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Babesia equi]
Length = 221
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 137/205 (66%), Gaps = 8/205 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFED-PKDTPPPTRVETRE 63
+PP+LL LF R P+ Y+ P+ + P ++K G S +FL + E+ P+ P T R+
Sbjct: 6 MPPHLLVLFQARPPLEYVEPMPEKP-KRKIDGLSDFTSFLTKDEERPQVVPFETPKMRRD 64
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDP-----NSFPNATMDPFKTLFIARVNYDTSESKL 118
+ +R E + + ++E+ +DP +S P T DP+KTLF++ + Y+ +E +L
Sbjct: 65 RKKRKRLTEHMQDLKKRIEKYDPNYDPRLARGSSTPFLTHDPYKTLFVSNIAYEVTERQL 124
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
+EFEVYG I++I M++++ KPRGYAFIE++ ERDM +AYK ADG+KI GRRV+VDVE
Sbjct: 125 WKEFEVYGRIRRIRMIYDQ-DNKPRGYAFIEFDSERDMVAAYKRADGRKISGRRVVVDVE 183
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGP 203
R+RTV+GWLPRRLGGG G +R P
Sbjct: 184 RARTVEGWLPRRLGGGKGPSRGAPP 208
>gi|66828257|ref|XP_647483.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
gi|74997505|sp|Q55FQ0.1|RU17_DICDI RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|60475520|gb|EAL73455.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 133/216 (61%), Gaps = 7/216 (3%)
Query: 4 FLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR--VET 61
FLPPNL +F PR P P P Y+G+ +L+ F DP + P + +E
Sbjct: 3 FLPPNLKIMFNPRHPPP----FLPPPPPSNLPPYTGLRDYLSIFTDPSNEEPFKKEHIEN 58
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
EE+ E++R+ + + ++ + + WDP S T DP+KT+F++R++Y T++ KL E
Sbjct: 59 LEEKREKKRKLKISENDERISKSLKAWDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFE 118
Query: 122 FEVYGPIKKIVMVHNKVTG-KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +GPIK + +V + K GYAFIE+E ERDM +AYK ADG KID RR++VD+ER
Sbjct: 119 FGQFGPIKSLFLVKDSNNPEKHTGYAFIEFERERDMKAAYKQADGMKIDDRRIVVDIERG 178
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNE 216
R +K W PR+ GGGLG TR GG DVN SGRE +E
Sbjct: 179 RVIKNWKPRKFGGGLGNTRAGGVDVNQTFSGREMSE 214
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 2/189 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LP NLLALF PR P+ YL P + P +KT SG+A FL E +P PT E
Sbjct: 1 MTDKLPGNLLALFQPRPPLRYLQPADHAPEHRKTAPISGVAQFLEELRNPDPDFMPT--E 58
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R++RE+ E L+Q ++P P+ DP+KTLF++R++YD E L R
Sbjct: 59 SWLLARDRKKREKLENQERTLKQGAENYNPGEDPHIRGDPYKTLFVSRLSYDVKEQDLER 118
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF +GPI +I +V +K + KPRGYAFI +E E+DM +A+K DG +I RR+ VDVER
Sbjct: 119 EFGRFGPIDRIRLVRDKESKKPRGYAFILFEREKDMKAAFKETDGMRIKDRRISVDVERG 178
Query: 181 RTVKGWLPR 189
RT KGW PR
Sbjct: 179 RTTKGWKPR 187
>gi|63100588|gb|AAH95150.1| Snrnp70 protein [Danio rerio]
Length = 141
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK Y GIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ETREERLER+RRE+ E+ +E E+ LWDP++ NA D FKTLF+AR+NYDT+ESKLR
Sbjct: 61 ETREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLR 120
Query: 120 REFEVYGPIKKIVMVH 135
REFEVYGPIK+I +V+
Sbjct: 121 REFEVYGPIKRIYIVY 136
>gi|154283073|ref|XP_001542332.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410512|gb|EDN05900.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 371
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + K G+A FL+E + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ + L + + ++PN+ P D FKTLF++R++YD +E+ L R
Sbjct: 61 SWLQRKARLKEEKKLNIERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLER 120
Query: 121 EFEVYGPIKKIVMV---HNKVTG--KP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V HN KP RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKNNAKKPHRGYAFIVYEREQDMKAAYKVTDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|399218189|emb|CCF75076.1| unnamed protein product [Babesia microti strain RI]
Length = 331
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 118/185 (63%), Gaps = 6/185 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+PP++LALF R P+ +LP + K G+A ++ EF D P P ET +E
Sbjct: 6 MPPHILALFEARPPLEHLPFADTTLRRKP----GGMAQYVKEFSDEIPVPQP-HFETPKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R R+ +E+ E + + I +DP S + T DP+KTLFI + Y+ +E +LR EFE
Sbjct: 61 RRARKNKEKIEAHLLRQKNLIEQYDPKSGNSLTHDPYKTLFIGNLAYEATERQLRSEFEA 120
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IK+I ++ + G PRGYAFIE++ ER+M +AYK DG+KI GRRV+VDVERSRTV
Sbjct: 121 YGKIKRIRIIAD-ANGNPRGYAFIEFDTEREMVNAYKRGDGRKIAGRRVIVDVERSRTVA 179
Query: 185 GWLPR 189
GWLPR
Sbjct: 180 GWLPR 184
>gi|124514052|ref|XP_001350382.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23615799|emb|CAD52791.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 423
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 133/195 (68%), Gaps = 6/195 (3%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+P ++L LF R + + P++K ++ YSG++ FLN FE+ + PP +VE+ +E
Sbjct: 6 MPQHILILFQARPMLEFYKPIKKKKPKE----YSGLSDFLNYFEEG-EAPPKIKVESFKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R E++++E+ L+++ +DP + T DP KTLFI R++Y+ SE KL++EFE
Sbjct: 61 RKEKKKKEKMAYNELILKEKRKEYDPFKNEDLTSDPKKTLFIGRLSYEVSEQKLKKEFES 120
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IK + ++++K KPRGYAFIE+EH + M+ AYK ADGKKI+ RR+LVD+ER RT+K
Sbjct: 121 YGKIKTVKIIYDK-NLKPRGYAFIEFEHTKSMNDAYKLADGKKIENRRILVDIERGRTIK 179
Query: 185 GWLPRRLGGGLGGTR 199
W+PRRLGGG G R
Sbjct: 180 NWIPRRLGGGKGPAR 194
>gi|325091104|gb|EGC44414.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 452
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + K G+A FL+E + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ + L + + ++PN+ P D FKTLF++R++YD +E+ L R
Sbjct: 61 SWLQRKARLKEEKKLNIERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLER 120
Query: 121 EFEVYGPIKKIVMV---HN--KVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V HN K KP RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 128/228 (56%), Gaps = 33/228 (14%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPV-----------EKLPHEKKTHG-YSGIAAFLNEF- 47
MT LPP+L+ LFAPR P+ Y+ P+ K P + +G+AA L
Sbjct: 1 MTHLLPPSLIRLFAPRPPLEYVAPLRYDPSPSSAPRSKDPSQPTVRAPLTGVAATLERIK 60
Query: 48 EDPKDTPPPT---------------RVETREERLERRRRERAEQVAYKLEQEIALWDPNS 92
+D D T R RE LE RR +A LE + P S
Sbjct: 61 QDAADRGESTDDIAQLTSSSSYTLSRATLREIELEARRAAKAATKQRGLET----YAPAS 116
Query: 93 FPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEH 152
AT D +KTLF+AR++YD +E L REF++YGPI+ I +V ++ GK RGYAFI YE
Sbjct: 117 NAAATPDAYKTLFLARLSYDVTEKDLHREFDMYGPIETIRLVRDR-NGKSRGYAFIAYER 175
Query: 153 ERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
ERDM +AYK ADG KI GRRV+VDVER RTVK W P RLGGGLGGT R
Sbjct: 176 ERDMKAAYKDADGIKIHGRRVMVDVERGRTVKDWKPMRLGGGLGGTSR 223
>gi|261189727|ref|XP_002621274.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591510|gb|EEQ74091.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239612961|gb|EEQ89948.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352134|gb|EGE80991.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 422
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P + + G+A F++E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPADRAPDDIEPSKIGGVAQFVDELQKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ ++ L + + ++PN+ P D FKTLF++R++YD +E+ L R
Sbjct: 61 SWLQRKARLKEEKKAKLEKHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLER 120
Query: 121 EFEVYGPIKKIVMV---HN--KVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
EF +GPI++I +V HN K KP RGYAFI YE E+DM +AYK DG +I RRVL
Sbjct: 121 EFGRFGPIERIRIVVDTHNPKKNPKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVL 180
Query: 175 VDVERSRTVKGWLP 188
VDVER RTVKGW P
Sbjct: 181 VDVERGRTVKGWKP 194
>gi|19114691|ref|NP_593779.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675931|sp|O13829.1|RU17_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein usp101; Short=U1 snRNP protein usp101
gi|2388912|emb|CAB11649.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe]
Length = 261
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
M + LP LLALFAPR P+ YLPP++ P ++ T SGIA +L + PT E
Sbjct: 1 MAEKLPAPLLALFAPRPPLRYLPPMDVPPEKRSTPRVSGIAKYLKYAQSHDQQYHPT--E 58
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ EE+ R R E+ +Q +L I +WDP+ + DP+KT+F++R++YDT ES + R
Sbjct: 59 SLEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIER 118
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF YGPI++I +V NKVTGK GYAF+ +E ERD+ AYK + G ++GRR++VDVER
Sbjct: 119 EFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAGLMLNGRRIVVDVERG 178
Query: 181 RTVKGWLPRR 190
RTVKGWLPR+
Sbjct: 179 RTVKGWLPRK 188
>gi|145542919|ref|XP_001457146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424961|emb|CAK89749.1| unnamed protein product [Paramecium tetraurelia]
Length = 315
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 150/266 (56%), Gaps = 27/266 (10%)
Query: 18 PVPYLPPVEKLPHEKK--THGYSGIAAF-------LNEFEDP----------KDTPPPTR 58
P+ +P + + + K Y I L++FED KD P+R
Sbjct: 47 PIFVIPQIAHIKSQPKLECRAYDSILGLGRKAEWMLDKFEDEYEQMQREEREKDIIKPSR 106
Query: 59 VETR-EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK 117
+ + +RLE++ + E L++ + LW+P PN T +P+KTLF+ R+NY T++ K
Sbjct: 107 LPLKILKRLEKKHQHNEE-----LKKLLQLWNPFEDPNITSEPYKTLFVGRLNYATTDKK 161
Query: 118 LRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 177
LR+EFE YGPIK I ++ + KPRGYAFIEYE + + AYK+A K+IDGR+++VD+
Sbjct: 162 LRKEFEEYGPIKSIRIIRDSTQDKPRGYAFIEYESKNSVKQAYKYAVDKRIDGRKLVVDI 221
Query: 178 ERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELA--GGPP 235
ER RT+ W PRRLGGGLG RR + K E E++ E R ++++E P
Sbjct: 222 ERGRTILKWRPRRLGGGLGELRRSRSEEISKKPKEEHVEKDEEDKRRKQKKEEVKPAKKP 281
Query: 236 RARSGSNDRERERERRRSRSRERKRR 261
R RS S ++ ++R S +++KRR
Sbjct: 282 RERSRSKSVKKHKKREESPIKKQKRR 307
>gi|323447116|gb|EGB03066.1| hypothetical protein AURANDRAFT_34517 [Aureococcus anophagefferens]
Length = 229
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 104/162 (64%), Gaps = 19/162 (11%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNA-----TMDPFKTLFIARVNYDTSESKL 118
ER + + E+AE +L +A WDP P+A T D +KTLF+AR++YDT+E KL
Sbjct: 1 ERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKL 60
Query: 119 RREFEVYGPIKKIVMVHNK--------------VTGKPRGYAFIEYEHERDMHSAYKHAD 164
RREFE +G IK + +VH + G PRGYAF+E+E E DM AYK AD
Sbjct: 61 RREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRAD 120
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVN 206
G+KIDGRRVLVDVER RTV+ W PR+LGGGLG TR+ G N
Sbjct: 121 GRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRKRGAAPN 162
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 142/274 (51%), Gaps = 39/274 (14%)
Query: 9 LLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNE---FEDPKDTPPPTRVETREER 65
LL F R P+PY+P + PH+ Y G+A +NE D +TPP + +++ R
Sbjct: 10 LLKFFQARPPLPYVPYPNRRPHKP----YQGLADLINENPDLFDKVNTPPEPYI-SKKMR 64
Query: 66 LERRRRERAEQVAYKLEQEIALWDP--NSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E + +R + + ++I ++P + N T DP+ TLFIAR+NYDT+E L+RE E
Sbjct: 65 RETEKLQRIQNYMKDMRKKIESYNPMEENVDNKTFDPYNTLFIARLNYDTTERTLKRELE 124
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTV 183
VYG I + +V + G+ RGYAF+E+++E + AYK + K IDG +VLVDVER RTV
Sbjct: 125 VYGKILNLRIVKD-FQGESRGYAFVEFDNEDSLKEAYKSFNKKSIDGWKVLVDVERGRTV 183
Query: 184 KGWLPRRLGGGLGGTRR----------GGPDVNLKHSGREDNERERERYRLERERELAGG 233
+ WLP+RLGGGLG R GG + H ++ N
Sbjct: 184 ENWLPKRLGGGLGKVRGQEKPESKSFFGGNNSIYNHGSKQGNSN---------------- 227
Query: 234 PPRARSGSNDRERERERRRSRSRERKRRTSRSRS 267
SG R+RE R RS K + R+ S
Sbjct: 228 --YGNSGFGQTYRQREHRSFRSYGYKGQNDRNSS 259
>gi|402590301|gb|EJW84232.1| hypothetical protein WUBG_04858, partial [Wuchereria bancrofti]
Length = 156
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 119/156 (76%), Gaps = 1/156 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLP NLLALF R P+PY PP + L ++K SG++ +++ FEDPKDTPP E
Sbjct: 1 MTQFLPDNLLALFEARPPLPYKPPPDDLLIDRKRPKMSGLSEYIHLFEDPKDTPPKPVYE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T+EER RRR+E+ E +AYK+EQ IA W+P P+AT DP+KTLF+AR+NY+TSESKLRR
Sbjct: 61 TKEERRARRRKEKEELLAYKIEQGIATWNPAQNPSATADPYKTLFVARINYETSESKLRR 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
EFE +G I ++ +VH+K GKPRGYAFIEY+H+ M
Sbjct: 121 EFEQFGKITRLALVHDK-NGKPRGYAFIEYQHKESM 155
>gi|347826795|emb|CCD42492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 436
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P ++KT SG+AAFL ++ K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPSDFAPEDRKTANISGLAAFLPALQEYKETDDYQPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ +++ L+ P+ PN D FKTL ++R++YD +E L R
Sbjct: 61 SWLQRKDRVKLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATEKDLER 120
Query: 121 EFEVYGPIKKIVMVHN--------KVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I +V + K K RGYAF+ +E E+DM + ++ DG +I RR
Sbjct: 121 EFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMRAGLENCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGWLP
Sbjct: 181 IKVDVERGRTVKGWLP 196
>gi|255077010|ref|XP_002502160.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
gi|226517425|gb|ACO63418.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
Length = 465
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 125/191 (65%), Gaps = 8/191 (4%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE---T 61
L P+LL LF R PV Y PP K KKT Y+GIA ++ F DP++ PPP E T
Sbjct: 71 LTPSLLRLFVARPPVEYHPPPAK---PKKTQPYTGIADYVKLFTDPEEDPPPPPAEPKET 127
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPN-ATMDPFKTLFIARVNYDTSESKLRR 120
+ E+ RR E+A++ ++E++I W+P P A DP+KTLF+ R++YD E+ LRR
Sbjct: 128 KAEKKTRRAAEKAKENDARIEEDITSWNPKEDPKLADSDPYKTLFVGRLSYDVDEAALRR 187
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EFE +G +K + +V ++ GKPRGYAF+E++ E DM AY+ ADG +++GRR+LVD ER
Sbjct: 188 EFERFGAVKSVTVVEDQ-DGKPRGYAFVEFDRESDMKHAYRSADGLRLEGRRILVDAERG 246
Query: 181 RTVKGWLPRRL 191
RTV W PRR
Sbjct: 247 RTVPDWRPRRF 257
>gi|82752588|ref|XP_727361.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii yoelii
17XNL]
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii
yoelii]
Length = 391
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 158/268 (58%), Gaps = 22/268 (8%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
LPP++L LF R + + P++K ++ Y+GI+ FLN FED K PP ++E+ +E
Sbjct: 6 LPPHILILFQSRPLLDFYKPIKKKKPKE----YTGISEFLNYFEDGK-PPPKIKLESPKE 60
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R ER+++E+ L+++ +DP + + DP KTLFI R++Y+ +E KL++EFE
Sbjct: 61 RKERKKKEKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFET 120
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
YG IK + +++++ KPRGYAFIE+EH + + AY ADGKKI+ RR+LVD+ER+RTVK
Sbjct: 121 YGKIKYVKVIYDQ-DKKPRGYAFIEFEHTKSVTDAYNLADGKKIENRRILVDMERARTVK 179
Query: 185 GWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYR--------------LEREREL 230
W+PRRLGGG G +R L HS + +++YR L ER
Sbjct: 180 NWVPRRLGGGKGPSRGSDERKKLTHSVNWNALINKDKYRDDKRKNDDPYKHIPLYSERND 239
Query: 231 AGGPPRARSGSNDRERERERRRSRSRER 258
G P S S D + R R+ R+R
Sbjct: 240 DG--PYGNSSSRDHKSHRGSERNSKRDR 265
>gi|170583875|ref|XP_001896768.1| RNA binding protein [Brugia malayi]
gi|158595926|gb|EDP34382.1| RNA binding protein, putative [Brugia malayi]
Length = 189
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 119/156 (76%), Gaps = 1/156 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MTQFLP NLLALF R P+PY PP + L ++K SG++ +++ FEDPKDTPP E
Sbjct: 28 MTQFLPDNLLALFEARPPLPYKPPPDDLLIDRKRPKMSGLSEYIHLFEDPKDTPPKPVYE 87
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
++EER RRR+E+ E +AYK+EQ IA W+P P+AT DP+KTLF+AR+NY+TSESKLRR
Sbjct: 88 SKEERRARRRKEKEELLAYKIEQGIATWNPAQNPSATTDPYKTLFVARINYETSESKLRR 147
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
EFE +G I ++ +VH+K GKPRGYAFIEY+H+ M
Sbjct: 148 EFEQFGKITRLALVHDK-NGKPRGYAFIEYQHKESM 182
>gi|67623601|ref|XP_668083.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659281|gb|EAL37866.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis]
Length = 281
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 122/196 (62%), Gaps = 11/196 (5%)
Query: 9 LLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNE---FEDPKDTPPPTRVETREER 65
LL F R P+PY+P + PH+ Y G+A +NE D +TPP + +++ R
Sbjct: 10 LLKFFQARPPLPYVPYPNRRPHKP----YQGLADLINENPDLFDKVNTPPEPYI-SKKMR 64
Query: 66 LERRRRERAEQVAYKLEQEIALWDP--NSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E + +R + + ++I ++P ++ N T DP+ TLFIAR+NYDT+E L+RE E
Sbjct: 65 RETEKLQRIQNYMKDMRKKIESYNPMEDNVDNKTFDPYNTLFIARLNYDTTERTLKRELE 124
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTV 183
VYG I + +V + G+ RGYAF+E+++E + AYK + K IDG +VLVDVER RTV
Sbjct: 125 VYGKILNLRIVKD-FQGESRGYAFVEFDNEDSLKEAYKSFNKKSIDGWKVLVDVERGRTV 183
Query: 184 KGWLPRRLGGGLGGTR 199
+ WLP+RLGGGLG R
Sbjct: 184 ENWLPKRLGGGLGKVR 199
>gi|70997103|ref|XP_753306.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|66850942|gb|EAL91268.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|159126968|gb|EDP52084.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
A1163]
Length = 395
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 18/206 (8%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ Y+PPV++ P + K G+A FL E + + P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYVPPVDRAPDDIKKSSIGGVADFLGELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R++ E+ E++ +L + + +DP++ P A DPFKTLF+AR++YD ES L R
Sbjct: 61 SWLQRKWRQKLEKKERLNKQLTEGLQSYDPSNDPQARGDPFKTLFVARLSYDVKESDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP-----RGYAFIEYEHERDMHS-AYKH------------ 162
EF +GPI++I +V + VT K RGYAFI YE E+DM A H
Sbjct: 121 EFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKGIAATHNYSENSATPLDP 180
Query: 163 ADGKKIDGRRVLVDVERSRTVKGWLP 188
+G +I RRVLVDVER RTVKGW P
Sbjct: 181 KNGIRIKDRRVLVDVERGRTVKGWKP 206
>gi|443916274|gb|ELU37399.1| U1 snRNP 70K protein [Rhizoctonia solani AG-1 IA]
Length = 250
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 31/228 (13%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF----------EDP 50
MT LPPNLL LFAPR P+P++ V K P + ++ SG+AA L E D
Sbjct: 1 MTHLLPPNLLKLFAPRPPLPFVRSVGKDPDKVRSKKVSGVAALLAEIREANERGIVEADD 60
Query: 51 KDTPPPTRVETREERLER--RRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIAR 108
+D T E ++R R +R ++ + ++ + P P AT DP+KTLFI+R
Sbjct: 61 RDREEGEEKFTYAEEIKRGIYREQRQKRKKEEFQKAKETYKPADDPEATGDPYKTLFISR 120
Query: 109 VNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH----------- 157
++ + +E LR+EF YG I++I +V NK G RGYAFI Y+ E+DM
Sbjct: 121 LSKNATEDDLRKEFGTYGRIERIRLVRNK-RGVSRGYAFIVYDREKDMKGILIPCHAPTW 179
Query: 158 -------SAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGT 198
+AYK ADG I G+R+LVDVER RTV+GW PRRLGGGLG +
Sbjct: 180 KLNSVPTAAYKEADGISILGKRILVDVERGRTVRGWKPRRLGGGLGAS 227
>gi|145538127|ref|XP_001454769.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422546|emb|CAK87372.1| unnamed protein product [Paramecium tetraurelia]
Length = 308
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 160/292 (54%), Gaps = 36/292 (12%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAF-------LNEFEDP------- 50
PP++ +F +P + ++ P + + Y + L++FED
Sbjct: 33 FPPDMQPIFV----IPQIAHIKSQP-KPRCRPYDPVLGLGRKAEWMLDKFEDEYEQMQRE 87
Query: 51 ---KDTPPPTRVETR-EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
KD P+R+ + +RLE++ + E L++ + LW+P PN T +P+KTLF+
Sbjct: 88 EREKDIVKPSRLPLKILKRLEKKHQHNEE-----LKKLLQLWNPFEDPNITSEPYKTLFV 142
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
R+NY T++ KLR+EFE YGPIK I ++ + KPRGYAFIEYE + + AYK+A K
Sbjct: 143 GRLNYATTDKKLRKEFEEYGPIKSIRIIRDSTQDKPRGYAFIEYESKNSVKQAYKYAVDK 202
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLER 226
+IDGR+++VD+ER RT+ W PRRLGGGLG RR + K E E++ E R +
Sbjct: 203 RIDGRKLVVDIERGRTILKWRPRRLGGGLGELRRSRSEELSKKPKEEHVEKDEEDKRRKS 262
Query: 227 ERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRER 278
++ P + RER R +S + +KR S + + +RR +S++R
Sbjct: 263 KKVEEVKP-------TKKPRERSRSKSVKKHKKREESPIK-KQKRREKSKKR 306
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK-----DTPPP 56
T LPPNLL LFAPR P+PY PV+K +T +G+A L + ++ +
Sbjct: 4 THLLPPNLLKLFAPRPPLPYARPVDKDIDRIRTKHVNGVAQILAQLKEANTDSLISSGTA 63
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSES 116
+E EE L+ RR ER + + + + + P P A DP+KTLFI+R++ +E+
Sbjct: 64 EAMEEGEEPLQIRREERKAKKTEEFKLAKSSYKPADDPEAVGDPYKTLFISRLHKTATET 123
Query: 117 KLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
LRREFE YG I+++ +V +K G+ RGYAF+ YE ERDM +AYK +DG I G+R+LVD
Sbjct: 124 DLRREFEGYGTIERVRIVRDK-KGRSRGYAFVVYERERDMKAAYKESDGLHIMGKRILVD 182
Query: 177 VERSRTVKGWLPRR 190
VER RTV+GW PRR
Sbjct: 183 VERGRTVRGWKPRR 196
>gi|145544312|ref|XP_001457841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425659|emb|CAK90444.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 148/264 (56%), Gaps = 28/264 (10%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAA-------FLNEFEDP------- 50
PP++ +F +P + + K + K Y I L++FED
Sbjct: 33 FPPDMQPIFV----IPQIAHI-KSQLKPKCRAYDPILGVGRKAEWMLDKFEDEYEQMERE 87
Query: 51 ---KDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIA 107
K P+R+ + + + RR+ +E+V +L+ W+P N T DP+KTLF+
Sbjct: 88 EREKGVVKPSRLPLKILKKQEMRRQHSEEVRKRLQT----WNPFEDANITSDPYKTLFVG 143
Query: 108 RVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKK 167
R+N+ T++ KLR+EFE YGPIK + +V + KPRGYAFIEYE + + SAYK+A K+
Sbjct: 144 RLNFATTDKKLRKEFEEYGPIKSVRIVRDSTHDKPRGYAFIEYESKNSVKSAYKYAVDKR 203
Query: 168 IDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERE--RYRLE 225
+DGR+V+VD+ER RT+ W PR LGGGLG RR + LK + + E+E E R + +
Sbjct: 204 VDGRKVVVDIERGRTILKWRPRYLGGGLGELRRSRSEELLKKTKDDQVEKEEEDKRRKTK 263
Query: 226 RERELAGGPPRARSGSNDRERERE 249
++ + PR+RS S + ++R+
Sbjct: 264 KDDGKSSKKPRSRSKSAKKHKKRD 287
>gi|340959550|gb|EGS20731.1| U1 small nuclear ribonucleoprotein 70 kDa-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 387
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 124/200 (62%), Gaps = 14/200 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL---NEFEDPKDTPPPT 57
MT LPPNLLALFAPR P+ ++PP++ P ++KT G+A +L E+E + P
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPIDLPPEQRKTAPIGGLAQYLPKIAEYEREYEYHP-- 58
Query: 58 RVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK 117
E+ ER +R++RE+AE + LE+ ++P++ PN D FKTL +AR++Y+ E
Sbjct: 59 -TESWLERRDRKKREKAEALKKLLEEGPKNYNPHADPNIRGDAFKTLIVARLSYEADEKD 117
Query: 118 LRREFEVYGPIKKIVMVH--------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
L REF +GPI++I ++ NK RGYAF+ +E E+DM +A + DG +I
Sbjct: 118 LEREFGRFGPIERIRLIRDTHAHEKPNKKIKPHRGYAFVVFEREKDMRAALEGCDGIRIK 177
Query: 170 GRRVLVDVERSRTVKGWLPR 189
GR + VDVER RTVKGW PR
Sbjct: 178 GRLIKVDVERGRTVKGWKPR 197
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 123/201 (61%), Gaps = 8/201 (3%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
R E+ K +++ +DPN+ PNAT DP+KTLF++R+NY++SESK++REFE YGPIK++
Sbjct: 3 RLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVH 62
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
+V +++T KP+GYAFIEY H RDM +AYK AD K++ + ER K PRRLG
Sbjct: 63 LVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADDKRLTAEEFWLMWERENRPK-LRPRRLG 121
Query: 193 GGLGGTRRGGPD---VNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERERE 249
G LG +R GG + + GR E R R ERE+ G R RS RE E
Sbjct: 122 GELGTSRVGGGEEIAGEQQPQGRTSQSEEPSRPREEREKSREKGKERERS----RELSHE 177
Query: 250 RRRSRSRERKRRTSRSRSRDR 270
+ R RSR+R R R RD+
Sbjct: 178 QPRERSRDRPREDKHHRDRDQ 198
>gi|294955087|ref|XP_002788400.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
gi|239903800|gb|EER20196.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
Length = 877
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 126/191 (65%), Gaps = 9/191 (4%)
Query: 2 TQFLPPNLLALFAPRDPVPY-LPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR-- 58
Q +PP+LLALF PR P Y P + K P H +G+A F+ FE + PP R
Sbjct: 3 AQGMPPHLLALFCPRPPQAYEKPQIRKAP--VTAHHLTGLADFVEYFEGGE---PPEREH 57
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
ET ER +RR +E+ E+ +E+ A + P + + DPFKTLF+ARV Y+T+E +L
Sbjct: 58 GETPLERKKRRAKEKKEKYEELIERLKADYKPQNNDKVSGDPFKTLFVARVAYETTEKQL 117
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
+R F YGPI+K+ ++H+ + G+ RGYAFIEY++E + AYK+ADG K+DGRRVLVDVE
Sbjct: 118 QRIFGEYGPIRKVTIIHD-LEGRSRGYAFIEYDNENSLKQAYKNADGIKVDGRRVLVDVE 176
Query: 179 RSRTVKGWLPR 189
R RTV GW+PR
Sbjct: 177 RGRTVSGWIPR 187
>gi|357017377|gb|AET50717.1| hypothetical protein [Eimeria tenella]
Length = 270
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 125/184 (67%), Gaps = 10/184 (5%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPP--TRVETR 62
+PP++LALF R+P+ LP ++ K+ Y+G+A +L +FE PPP + E+
Sbjct: 6 MPPHILALFQAREPLAPLPALKA----KQPRPYAGVAEYLKKFE---SGPPPAASAFESP 58
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREF 122
++R +R +R++ + +++ + P P DPF TLF+ +++Y+TSE KLRREF
Sbjct: 59 KQRQQRLKRQKLLLHLQQQQRQAEAYRPLEDPRIQGDPFATLFVGKLSYETSEKKLRREF 118
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
EVYGP++++ +V + G+PRGYAF+E+E +RDM AYK ADG KIDGRRVLVDVER+RT
Sbjct: 119 EVYGPVRRVRVVRDP-RGRPRGYAFVEFERDRDMKEAYKKADGTKIDGRRVLVDVERART 177
Query: 183 VKGW 186
V GW
Sbjct: 178 VPGW 181
>gi|367027924|ref|XP_003663246.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
gi|347010515|gb|AEO58001.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
Length = 313
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 122/200 (61%), Gaps = 14/200 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL---NEFEDPKDTPPPT 57
MT LPPNLLALFAPR P+ ++PP + P E++T SG+A +L E+E + P
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPCDHPPEERRTASISGVAQYLPAMAEYERVYEYHP-- 58
Query: 58 RVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK 117
E+ ER +R++RE+ EQV L + ++P++ PN D FKTL +AR++Y+ E
Sbjct: 59 -TESWLERRDRKKREKQEQVERLLTEGPKNYNPHADPNIRGDAFKTLIVARLDYNADEKD 117
Query: 118 LRREFEVYGPIKKIVMV--------HNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
L REF +GPI++I ++ NK RGY F+ +E E+DM +A + DG +I
Sbjct: 118 LEREFGRFGPIERIRIIRDTHAHEKGNKKQKPHRGYGFVVFEREKDMRAALEGCDGIRIK 177
Query: 170 GRRVLVDVERSRTVKGWLPR 189
RR+ VDVER RTVKGW PR
Sbjct: 178 DRRIKVDVERGRTVKGWKPR 197
>gi|322702160|gb|EFY93908.1| U1 small nuclear ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++ P + P ++KT G+AAFL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVEPPDYAPEKRKTAPIDGVAAFLPELQKYKETDVYNPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R+++E+ E V L + + PN PN D FKTL +AR++YD E L R
Sbjct: 61 SWLEARDRKKQEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 121 EFEVYGPIKKIVMVH--------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++ NK RGYAF+ +E E+D+ +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIITDTHAHEKPNKKKKAHRGYAFVVFEREKDLRAALDSCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 181 IKVDVERGRTVKGWKP 196
>gi|224004248|ref|XP_002295775.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
gi|209585807|gb|ACI64492.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
Length = 174
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 10/176 (5%)
Query: 31 EKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREERL-ERRRRERAEQVAYKLEQEIALW- 88
+K+ HG SG+++FLN FE + TPP ++ + L E +R+ A + KL I +
Sbjct: 2 KKRGHGLSGVSSFLNHFE--RTTPPQRKINPTPKSLRETKRKTAAVENEGKLAPLIEAYR 59
Query: 89 -----DPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
F N M+ + TLF+ R+ Y+ +E KL RE E YGP+K + ++ + TGK R
Sbjct: 60 AEQSSSGGEFTNG-MNCYNTLFVGRLAYEVTERKLLREMESYGPVKDLKLITDCKTGKSR 118
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTR 199
GYAF+EYE E DM A++ ADG +++GR ++VDVER TV WLPR+ GGGLGGTR
Sbjct: 119 GYAFVEYEKEDDMKRAFRAADGMRLEGRAIVVDVERGHTVPNWLPRKFGGGLGGTR 174
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL---------------NE 46
T LPPNLL LFAPR P+PY PV+K + SG+A L N
Sbjct: 4 THLLPPNLLKLFAPRPPLPYARPVDKDIDRIRKKNVSGVAEILQRLKEENTDSLFNAANN 63
Query: 47 FEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
E ++ P E + + RR ER + A + + + P P A DP+KTLFI
Sbjct: 64 DEQMEEGEEPVFTHAEEVKRQIRREERKARKAEEFRKAKESYKPADDPEAIGDPYKTLFI 123
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
AR++ +E+ LRREFE YG I+++ +V +K G+ RGYAFI YE ERDM +AYK +DG
Sbjct: 124 ARLHKSATETDLRREFEGYGTIERVRIVRDK-NGRSRGYAFIVYERERDMKAAYKESDGL 182
Query: 167 KIDGRRVLVDVERSRTVKGWLPRR 190
I G+R+LVDVER RTV+GW PRR
Sbjct: 183 HIMGKRILVDVERGRTVRGWKPRR 206
>gi|322707331|gb|EFY98910.1| U1 small nuclear ribonucleoprotein [Metarhizium anisopliae ARSEF
23]
Length = 392
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++ P + P ++KT +G+AA L E + K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVEPPDYAPEKRKTAPINGVAALLPELQKYKETDVYNPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++ E+ E V L + + PN PN D FKTL +AR++YD E L R
Sbjct: 61 SWLEAKDRKKHEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 121 EFEVYGPIKKIVMVH--------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++ NK RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIITDTHAHEKPNKKKKAHRGYAFVVFEREKDMRAALDSCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 181 IKVDVERGRTVKGWKP 196
>gi|378726735|gb|EHY53194.1| U1 small nuclear ribonucleoprotein 70kDa [Exophiala dermatitidis
NIH/UT8656]
Length = 377
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 10/198 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK--KTHGYSGIAAFLNEFEDPK--DTPPP 56
MT LPPNLLALF PR P+ Y+PP + P E+ K SGIAAFL +FE K D P
Sbjct: 1 MTDKLPPNLLALFQPRPPLRYIPPQDAAPEERASKKSELSGIAAFLPQFEQYKQEDVYHP 60
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSES 116
T E+ ++ +R+ E+ ++A ++ + + P P D KTLF+ R++YD E+
Sbjct: 61 T--ESWLQKRDRKLWEKKMRLAEIQREDFSGYRPQDDPKIKGDAAKTLFVGRLSYDVKEA 118
Query: 117 KLRREFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
L REF +GPI++I +V ++ T KP RGYAFI +E E+DM +AYK DG +I R+
Sbjct: 119 DLEREFGRFGPIERIRIVKDETTPKPKKPHRGYAFIVFEREKDMRAAYKETDGLRIKDRK 178
Query: 173 VLVDVERSRTVKGWLPRR 190
V+VDVER R V GW PRR
Sbjct: 179 VVVDVERGRMVPGWRPRR 196
>gi|406866559|gb|EKD19599.1| U1 small nuclear ribonucleoprotein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 408
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 125/199 (62%), Gaps = 14/199 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + ++KT SG+A+FL + E+ K T V
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPSDHASEDRKTAYISGLASFLPQLEEYKKT--DVYVP 58
Query: 61 TREERLERRRRERAEQVAYK---LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK 117
T E L+++ R +AE+ A + + A + P+ PN D FKTL +AR++YD ++
Sbjct: 59 T-ESWLQKKDRIKAEKRAAQEALTKNGPATYKPDEDPNIRGDAFKTLIVARLSYDATDQD 117
Query: 118 LRREFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKID 169
+ REF +GPI++I ++V KP RGYAF+ +E E+DM +A ++ DG +I
Sbjct: 118 IEREFSRFGPIERIRIVVDTHQDEKPNKKKKNHRGYAFVVFEREKDMRAALENCDGIRIK 177
Query: 170 GRRVLVDVERSRTVKGWLP 188
RR+ VDV+R++TV+GWLP
Sbjct: 178 DRRIKVDVQRAKTVRGWLP 196
>gi|367049672|ref|XP_003655215.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
gi|347002479|gb|AEO68879.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
Length = 391
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PPV+ P E++T SG+A +L + E
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPVDHPPEERRTAAISGVAQYLPALAAYEHEYEYHPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ER +R++RE+ +V L + ++P+ PN D FKTL +AR++Y+ E L R
Sbjct: 61 SWLERRDRKKREKQAEVEKLLTEGPKKYNPHEDPNIRGDAFKTLIVARLDYNADEKDLER 120
Query: 121 EFEVYGPIKKIVMV--------HNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++ NK RGY F+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIIRDTHAHEKGNKKQKPHRGYGFVVFEREKDMRAALDGCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLPR 189
+ VDVER RTVKGW PR
Sbjct: 181 IKVDVERGRTVKGWKPR 197
>gi|320586925|gb|EFW99588.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 428
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 8/197 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALFAPR P+ ++ PV+ P E++T SGIA FL ++ KD E
Sbjct: 1 MTDKLPPQLLALFAPRPPLRWVQPVDYAPGERQTIPVSGIAQFLPALKEFKDHDGFVPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R ER+ E KL + + P PN DPFKTL +AR++Y+ +E L R
Sbjct: 61 SWLQRRERKAEEHKAAEEKKLTEGPRNYKPADDPNIRGDPFKTLIVARLSYEATEQDLER 120
Query: 121 EFEVYGPIKKIVMV---HNKVTG----KP-RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YGPI++I ++ H G KP RGYAF+ +E E+DM +A+ DG +I RR
Sbjct: 121 EFARYGPIERIRIIKDTHADEKGNKKRKPHRGYAFVVFEREKDMRAAHDACDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLPR 189
+ VDVER RTVKGW P+
Sbjct: 181 IKVDVERGRTVKGWKPQ 197
>gi|355721025|gb|AES07128.1| small nuclear ribonucleoprotein 70kDa [Mustela putorius furo]
Length = 144
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+PYLPP+EKLPHEK Y GIA ++ EFEDP+D PPPTR
Sbjct: 26 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA 85
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
ETREER+ER+RRE+ E+ ++E E+ +WDP++ PNA D FKTLF+ARVNYDT+ESKL
Sbjct: 86 ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 144
>gi|358391969|gb|EHK41373.1| hypothetical protein TRIATDRAFT_176911, partial [Trichoderma
atroviride IMI 206040]
Length = 392
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ ++ P + P +++T G+AAFL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRWVEPSDHAPEKRRTAPIGGVAAFLPELQKYKETDKYEPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++RE E + + + PN PN D FKTL +AR++YD E L R
Sbjct: 61 SWLEMRDRKKRETQENATNLVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYDAEERDLER 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++V KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RT K WLP
Sbjct: 181 IKVDVERGRTAKNWLP 196
>gi|440639828|gb|ELR09747.1| hypothetical protein GMDG_04233 [Geomyces destructans 20631-21]
Length = 489
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR + ++PP + P ++KT SG+AAFL E+ K T E
Sbjct: 42 MTDKLPPNLLALFAPRPGLRWVPPSDHAPQDRKTATISGLAAFLPALEEYKATDKYEPTE 101
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R R E+ E L++ A + P N D FKTL +AR++YD +E L R
Sbjct: 102 SWLQRKDRLRLEKREAQEQLLKEGPADYKPQEDQNIRGDAFKTLIVARLSYDATEQDLER 161
Query: 121 EFEVYGPIKKIVMVH--------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I +V NK K RGYAF+ +E E+DM +A DG +I RR
Sbjct: 162 EFGRFGPIERIRIVTDTHQDEKPNKKKKKHRGYAFVVFEREKDMRAALDGCDGIRIKERR 221
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 222 IKVDVERGRTVKGWKP 237
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 116/199 (58%), Gaps = 11/199 (5%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPP------ 55
T LPPNLL LFAPR P+PY P+++ + G+ L + + P
Sbjct: 4 THLLPPNLLKLFAPRPPLPYQRPLDRDIDRVRPKNVHGVGEILQRLRVEEASKPHDENME 63
Query: 56 ----PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNY 111
P E + + RR ER ++ ++ + P P A DP+KTLFI+R++
Sbjct: 64 EGEEPNFTLAEEVKRQIRREERKKKKTEDFQRAKDTYKPADDPEAVGDPYKTLFISRLHK 123
Query: 112 DTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGR 171
+ +ES LRREFE YG I+++ +V +K G+ RGYAFI YE ERDM +AYK +DG I G+
Sbjct: 124 NATESDLRREFESYGMIERVRIVRDK-QGRSRGYAFIVYERERDMKTAYKESDGLVILGK 182
Query: 172 RVLVDVERSRTVKGWLPRR 190
R+LVDVER RTV+GW PRR
Sbjct: 183 RILVDVERGRTVRGWKPRR 201
>gi|116207864|ref|XP_001229741.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
gi|88183822|gb|EAQ91290.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
Length = 387
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 116/200 (58%), Gaps = 14/200 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL---NEFEDPKDTPPPT 57
MT LPPNLLALFAPR P+ ++PP + P +KT SG+A FL E+E + P
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPSDHAPELRKTAAVSGVAQFLPALAEYEREYEYHP-- 58
Query: 58 RVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK 117
E+ E +R++RE+ +QV + + + P+ PN D FKTL +AR++Y E
Sbjct: 59 -TESWLEARDRKKREKLQQVEEAVTEGPKNYSPHDDPNIRGDAFKTLIVARLDYSADEKD 117
Query: 118 LRREFEVYGPIKKIVMV--------HNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
L REF +GPI++I ++ NK RGY F+ +E E+DM +A DG +I
Sbjct: 118 LEREFGRFGPIERIRIIRDTHAHEKGNKKKKPHRGYGFVVFEREKDMRAALDGCDGIRIK 177
Query: 170 GRRVLVDVERSRTVKGWLPR 189
RR+ VDVER RTVKGW PR
Sbjct: 178 DRRIKVDVERGRTVKGWKPR 197
>gi|449301882|gb|EMC97891.1| hypothetical protein BAUCODRAFT_31906 [Baudoinia compniacensis UAMH
10762]
Length = 363
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 119/210 (56%), Gaps = 27/210 (12%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL----NEFEDPKDTPPP 56
MT LPPNLLALFAPR + YLPP + P +++T +G+AAFL EF D K T
Sbjct: 1 MTDKLPPNLLALFAPRPALRYLPPADHAPEDRRTARITGVAAFLPALKEEFGDYKPT--- 57
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIA--LWDPNSFPNATMDPFKTLFIARVNYDTS 114
E+ E+ +RR E+ E Y L E A L++P N T D F TLF+ R++YDT
Sbjct: 58 ---ESWLEKRDRRILEKQEHQKY-LTGEGAKELYNPTKDENITGDAFSTLFVGRLSYDTD 113
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVT--------------GKPRGYAFIEYEHERDMHSAY 160
L+REF +GPI +I +V + G RGYAF+ +E ER M +AY
Sbjct: 114 VKDLQREFGRFGPIARIRVVQDNGGSEKDSTRRQKKSRRGMSRGYAFVVFEQERHMKAAY 173
Query: 161 KHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
K D I GR+VLVDVER RT+ GW PRR
Sbjct: 174 KETDHLVIRGRKVLVDVERGRTISGWRPRR 203
>gi|336470127|gb|EGO58289.1| hypothetical protein NEUTE1DRAFT_64015 [Neurospora tetrasperma FGSC
2508]
gi|350290179|gb|EGZ71393.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 415
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P E+K+ + +A FL + + E
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPCDVAPEERKSAFVTPVADFLPAMQAYEQEYEYHPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++RE+ E + L + ++PN PN D FKTL +AR++Y E L R
Sbjct: 61 SWLEARDRKKREKKEALEKLLTEGPKNYNPNDDPNIRGDAFKTLIVARLDYRADEQDLER 120
Query: 121 EFEVYGPIKKIVMVH--------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YGPI++I ++ NK RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFSRYGPIERIRIIRDTHADENPNKKKKPHRGYAFVVFEREKDMRAALDGCDGARIKDRR 180
Query: 173 VLVDVERSRTVKGWLPR 189
+ VDVER RTVKGW PR
Sbjct: 181 IKVDVERGRTVKGWKPR 197
>gi|85091763|ref|XP_959061.1| hypothetical protein NCU07548 [Neurospora crassa OR74A]
gi|28920458|gb|EAA29825.1| predicted protein [Neurospora crassa OR74A]
Length = 415
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P E+K+ + +A FL + + E
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPCDVAPEERKSAFITPVADFLPAMQAYEQEYEYHPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++RE+ E + L + ++PN PN D FKTL +AR++Y E L R
Sbjct: 61 SWLEARDRKKREKKEALEKLLTEGPKNYNPNDDPNIRGDAFKTLIVARLDYRADEQDLER 120
Query: 121 EFEVYGPIKKIVMVH--------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YGPI++I ++ NK RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFSRYGPIERIRIIRDTHADENPNKKKKPHRGYAFVVFEREKDMRAALDGCDGARIKDRR 180
Query: 173 VLVDVERSRTVKGWLPR 189
+ VDVER RTVKGW PR
Sbjct: 181 IKVDVERGRTVKGWKPR 197
>gi|358377877|gb|EHK15560.1| hypothetical protein TRIVIDRAFT_232656 [Trichoderma virens Gv29-8]
Length = 410
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ ++ P + P +++T G+AAFL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRWVEPSDHAPEKRRTAPIGGLAAFLPELQKYKETDAYQPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R+++E+ E + + + + PN PN D FKTL +AR++Y+ E L R
Sbjct: 61 SWLEMRDRKKQEKTEAASNLVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYEADERDLER 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++V KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RT K WLP
Sbjct: 181 IKVDVERGRTAKNWLP 196
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 119/208 (57%), Gaps = 20/208 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF-----EDPKDT--- 53
T LPPNLL LFAPR P+PY P+++ + G+ L + +D D+
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVEGVGHILAQLREARTQDLIDSGNA 63
Query: 54 -----------PPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK 102
PT E + + RR ER ++ A + + P P AT DP+K
Sbjct: 64 AKREEDAMEEGEEPTFTYAEETKRQIRREERKQKKAEDFAKAKDNYKPAEDPEATGDPYK 123
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TLFI+R++ + SES LRREFE +G I+++ +V +K G+ RGYAFI +E ERDM +AYK
Sbjct: 124 TLFISRLHKNASESDLRREFESFGSIERVRIVRDK-NGRSRGYAFIVFERERDMKAAYKE 182
Query: 163 ADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+D I G+RVLVDVER RTV+GW PRR
Sbjct: 183 SDRLHIMGKRVLVDVERGRTVRGWKPRR 210
>gi|340518330|gb|EGR48571.1| predicted protein [Trichoderma reesei QM6a]
Length = 240
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ ++ P + P +++T G+AAFL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRWVEPSDYAPEKRRTAPIGGVAAFLPELQKYKETDVYEPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++RE+AE + + PN PN D FKTL +AR++YD E L R
Sbjct: 61 SWLEMRDRKKREKAEAAERLKIEGPKKFKPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
EF +GPI+++ VM H K KP RGYAF+ +E E+DM +A DG +I RR+ VDVE
Sbjct: 121 EFGRFGPIERVRVMTHRK--KKPHRGYAFVVFEREKDMRAALDACDGIRIKDRRIKVDVE 178
Query: 179 RSRTVKGWLPRRL 191
R RT K WLPRRL
Sbjct: 179 RGRTAKNWLPRRL 191
>gi|119572836|gb|EAW52451.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_f [Homo sapiens]
Length = 304
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 101/141 (71%), Gaps = 25/141 (17%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
+E E+ +WDP++ PNA D FKTLFI MV++K +G
Sbjct: 16 VETELKMWDPHNDPNAQGDAFKTLFIH-------------------------MVYSKRSG 50
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRR
Sbjct: 51 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRR 110
Query: 201 GGPDVNLKHSGREDNERERER 221
GG DVN++HSGR+D R ER
Sbjct: 111 GGADVNIRHSGRDDTSRYDER 131
>gi|68064271|ref|XP_674124.1| u1 small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56492466|emb|CAH97184.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 319
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 125/219 (57%), Gaps = 20/219 (9%)
Query: 77 VAYK---LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVM 133
+AY L+++ +DP + + D KTLFI R++Y+ +E KL++EFE YG IK + +
Sbjct: 19 IAYNELILKEKKKEYDPFKNNDISSDLKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKV 78
Query: 134 VHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGG 193
++++ KPRGYAFIE+EH + + AY ADGKKID RR+LVD+ER+RTVK W+ RRLGG
Sbjct: 79 IYDQ-DKKPRGYAFIEFEHTKSVTDAYNLADGKKIDNRRILVDMERARTVKNWILRRLGG 137
Query: 194 GLGGTRRGGPDVNLKHSGREDNERERERYR--------------LERERELAGGPPRARS 239
G G +R L HS + +++YR L ER G P S
Sbjct: 138 GKGPSRGSDERKKLTHSVNWNALINKDKYRDDKRKNDDSYKHIPLYNERNDDG--PYGNS 195
Query: 240 GSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRER 278
S D R R+ R+R R+ RS SRD+ R + +R
Sbjct: 196 SSRDHRSHRGSERNSKRDRNHRSRRSDSRDKYRHKYHKR 234
>gi|402078981|gb|EJT74246.1| hypothetical protein GGTG_08089 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 400
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+P ++ P +++ G+A F ++ KD E
Sbjct: 1 MTDRLPPNLLALFAPRPPLRYIPHIDAPPDQRRATTIDGVAGFKAALQEYKDKDGYVASE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R++ E E+VA L++ A + P PN D FKTL +AR++Y+ E + +
Sbjct: 61 SWLQRRDRKKAEHTEEVARHLKEGPAKYKPLEDPNIRGDAFKTLIVARLSYEADERDIEK 120
Query: 121 EFEVYGPIKKIVMV---HNKVTG----KP-RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +G I++I ++ H G KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGTIERIRIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALDGCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
V VDVER RTV+GW P
Sbjct: 181 VKVDVERGRTVEGWKP 196
>gi|361128631|gb|EHL00561.1| putative U1 small nuclear ribonucleoprotein 70 kDa like protein
[Glarea lozoyensis 74030]
Length = 421
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR + ++ P + P E+KT SGIAAFL + ++ K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPALRWVAPSDHAPAERKTPNISGIAAFLPQLQEYKETDDYKPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ + L++ + P+ PN D FKTL +AR++Y+ +E L
Sbjct: 61 SWLQRKDRLKMEKKQHQEKLLKEGPTGYKPSEDPNIRGDAFKTLIVARLSYEATEQDLES 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YG I++I ++V KP RGYAF+ +E E+DM +A ++ DG +I RR
Sbjct: 121 EFGRYGAIERIRIVVDTHQDEKPNKKKKKHRGYAFVVFEREKDMRAALENCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTV+ W P
Sbjct: 181 IKVDVERGRTVRDWKP 196
>gi|324508872|gb|ADY43741.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 121
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
Query: 38 SGIAAFLNEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNAT 97
SG+A +++ FEDPKDTPP ET+EER RRR+E+ E +AYK+EQ IA W P P AT
Sbjct: 2 SGLAEYVHLFEDPKDTPPKPIFETKEERRARRRKEKEELLAYKIEQGIATWAPAENPTAT 61
Query: 98 MDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
DP+KTLF+AR+NY+TSESKLRREFE +G I K+++VH+ GKPRGYAFIEY+H+ +M
Sbjct: 62 TDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHDP-NGKPRGYAFIEYQHKENM 119
>gi|346971277|gb|EGY14729.1| U1 small nuclear ribonucleoprotein [Verticillium dahliae VdLs.17]
Length = 416
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 9/197 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P +++T SGIAAFL + KD E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPPDHAPEQRRTAPVSGIAAFLPALAEYKDKDGYVPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ + +R+++E ++ + + PN PN D FKTL +AR++Y+ +E L R
Sbjct: 61 SWLQMKDRKKQEHKAKLERLAAEGPVDYKPNEDPNIRGDAFKTLIVARLSYEANEQDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP---------RGYAFIEYEHERDMHSAYKHADGKKIDGR 171
EF +G I++I ++ + + RGYAF+ +E ERDM +A DG +I R
Sbjct: 121 EFGRFGNIERIRIITDTHAHEKSKNKKKKPHRGYAFVVFERERDMRAALDSCDGIRIKDR 180
Query: 172 RVLVDVERSRTVKGWLP 188
R+ VDVER RTVKGW P
Sbjct: 181 RIKVDVERGRTVKGWKP 197
>gi|302410869|ref|XP_003003268.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
gi|261358292|gb|EEY20720.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
Length = 413
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 9/197 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P +++T SGIAAFL + KD E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPPDHAPEQRRTAPVSGIAAFLPALAEYKDQDGYVPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ + +R+++E ++ + + PN PN D FKTL +AR++Y+ +E L R
Sbjct: 61 SWLQMKDRKKQEHKAKLERLAAEGPVDYKPNEDPNIRGDAFKTLIVARLSYEANEQDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP---------RGYAFIEYEHERDMHSAYKHADGKKIDGR 171
EF +G I++I ++ + + RGYAF+ +E ERDM +A DG +I R
Sbjct: 121 EFGRFGNIERIRIITDTHAHEKSKNKKKKPHRGYAFVVFERERDMRAALDSCDGIRIKDR 180
Query: 172 RVLVDVERSRTVKGWLP 188
R+ VDVER RTVKGW P
Sbjct: 181 RIKVDVERGRTVKGWKP 197
>gi|396477011|ref|XP_003840172.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
gi|312216743|emb|CBX96693.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
Length = 398
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LL LFAPR P+ ++ P + P ++ T SG+ +L D KD +
Sbjct: 1 MTHLLPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKISGVGQYLQAMRDYKDQDNYVPTD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ++ +R++ E+ E+ L + I + P+ P D FKTLF++R+ Y + L R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLLTEGIQNYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP--------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YGPI++I +V + +T P RGYAFI YE E+DM +AYK DG KI RR
Sbjct: 121 EFGRYGPIERIRIVED-ITAPPDAPPKKRKRGYAFIVYEREKDMKAAYKETDGIKIKDRR 179
Query: 173 VLVDVERSRTVKGW 186
VLVDVER RTV GW
Sbjct: 180 VLVDVERGRTVTGW 193
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK--DT----- 53
MT LPPNLL LFAPR P+PYL V + P++ K G+A L + ++ DT
Sbjct: 1 MTHLLPPNLLKLFAPRPPLPYLRAVGRDPNKPKLKNVGGVATLLAQIKEQTIVDTEKDDG 60
Query: 54 ----PPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARV 109
T E + RR ER + + + + + P+ P+A DP+KTLFI+R+
Sbjct: 61 REEGEEEQFTYTEEVKRSIRREERKKMMEENMTKAKDNYKPSEDPHAQGDPYKTLFISRL 120
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
+ +E L++EFE YG I++I +V + + RGYAF+ YE ERDM +AYK A+G +
Sbjct: 121 SKKVTEKDLQKEFERYGDIEQIRLVRDP-QARSRGYAFVVYERERDMKAAYKDAEGLVLL 179
Query: 170 GRRVLVDVERSRTVKGWLPRR 190
G+R+LVDVER RTV+GW PRR
Sbjct: 180 GKRILVDVERGRTVRGWRPRR 200
>gi|56759496|gb|AAW27888.1| SJCHGC02308 protein [Schistosoma japonicum]
Length = 203
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 78/101 (77%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+AR+NYDT+ESK++RE + +G I IVMV N +TGKPRGY F+E+EHERDMH+A K
Sbjct: 1 MFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVKAL 60
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
+G+KIDG RV+ DVER RT W PRRLG GLG R+G D
Sbjct: 61 NGRKIDGARVVTDVERGRTRPDWRPRRLGKGLGKNRQGPSD 101
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 18/204 (8%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDT-------- 53
T LPPNLL LFAPR P+PY PV K G+ + L + ++
Sbjct: 4 THLLPPNLLKLFAPRPPLPYARPVGKDIDRITNKNVDGVGSILAQLKEASTAGLLNGEGD 63
Query: 54 -------PPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
P T E + ++ R R+R + +K+ +E + P+ P A DP+KTLFI
Sbjct: 64 GMEEGEEPAFTHAEETKRQIRREERKRRKVEEFKIAKET--YKPSDDPEAIGDPYKTLFI 121
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
+R++ SE +LRR+FE +G I+++ +V + G+ RGYAFI YE ERDM +AYK +DG
Sbjct: 122 SRLHKGASEMELRRDFESFGTIERVRIVRDS-KGRSRGYAFIVYERERDMKAAYKESDGL 180
Query: 167 KIDGRRVLVDVERSRTVKGWLPRR 190
I+G+R+LVDVER RTV+GW PRR
Sbjct: 181 HINGKRILVDVERGRTVRGWKPRR 204
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 119/206 (57%), Gaps = 23/206 (11%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL--------NEFEDPKDT 53
T LPPNLL LFAPR P+PY P+++ + G G+ L N + D
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDRDIDRVRAKGVGGVGPILAGLREETTNNLFNTNDA 63
Query: 54 PPPTRVETREERL-----ERRRRERAEQVAYKLEQEIALWDPNSFPN----ATMDPFKTL 104
+E EE + E +R+ R EQ +LE+E N P A DP+KTL
Sbjct: 64 -----MEEGEEPVFTLAEEVKRQLRREQRKARLEEEFKKAKENYKPADDAEAVGDPYKTL 118
Query: 105 FIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
FI+R++ +E+ LRREFE YG I+++ +V +K + RGYAFI YE ERDM +AYK +D
Sbjct: 119 FISRLHKSATETDLRREFEGYGTIERVRIVRDK-KNRSRGYAFIVYERERDMKAAYKESD 177
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPRR 190
G I G+++LVDVER RTV+GW PRR
Sbjct: 178 GLHIMGKKILVDVERGRTVRGWKPRR 203
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 119/206 (57%), Gaps = 23/206 (11%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL--------NEFEDPKDT 53
T LPPNLL LFAPR P+PY P+++ + G G+ L N + D
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDRDIDRVRAKGVGGVGPILAGLREETTNNLFNTNDA 63
Query: 54 PPPTRVETREERL-----ERRRRERAEQVAYKLEQEIALWDPNSFPN----ATMDPFKTL 104
+E EE + E +R+ R EQ +LE+E N P A DP+KTL
Sbjct: 64 -----MEEGEEPVFTLAEEVKRQLRREQRKARLEEEFKKAKENYKPADDAEAVGDPYKTL 118
Query: 105 FIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
FI+R++ +E+ LRREFE YG I+++ +V +K + RGYAFI YE ERDM +AYK +D
Sbjct: 119 FISRLHKSATETDLRREFEGYGTIERVRIVRDK-KNRSRGYAFIVYERERDMKAAYKESD 177
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPRR 190
G I G+++LVDVER RTV+GW PRR
Sbjct: 178 GLHIMGKKILVDVERGRTVRGWKPRR 203
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 18/204 (8%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDT-------- 53
T LPPNLL LFAPR P+PY PV K G+ + L + ++
Sbjct: 4 THLLPPNLLKLFAPRPPLPYARPVGKDIDRITNKNVDGVGSILAQLKEASTAGLLNGEGD 63
Query: 54 -------PPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
P T E + ++ R R+R + +K+ +E + P+ P A DP+KTLFI
Sbjct: 64 GMEEGEEPAFTHAEETKRQIRREERKRRKVEEFKIAKET--YKPSDDPEAIGDPYKTLFI 121
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
+R++ SE +LRR+FE +G I+++ +V + G+ RGYAFI YE ERDM +AYK +DG
Sbjct: 122 SRLHKGASEMELRRDFESFGTIERVRIVRDS-KGRSRGYAFIVYERERDMKAAYKESDGL 180
Query: 167 KIDGRRVLVDVERSRTVKGWLPRR 190
I+G+R+LVDVER RTV+GW PRR
Sbjct: 181 HINGKRILVDVERGRTVRGWKPRR 204
>gi|389632567|ref|XP_003713936.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|351646269|gb|EHA54129.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|440473215|gb|ELQ42030.1| hypothetical protein OOU_Y34scaffold00240g37 [Magnaporthe oryzae
Y34]
gi|440480244|gb|ELQ60919.1| hypothetical protein OOW_P131scaffold01214g36 [Magnaporthe oryzae
P131]
Length = 405
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YLPP + HE+KT +G+A + ED KD E
Sbjct: 1 MTDRLPPNLLALFAPRPPLRYLPPSDAPAHERKTATITGLAQYKQALEDYKDKDNYVPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R++ E +++A KL++ A + P PN D FKTL +AR++YD +E L R
Sbjct: 61 SWLQRRDRKKLEHEKEIALKLKEGPAKYKPQDDPNIRGDAFKTLIVARLSYDANEQDLER 120
Query: 121 EFEVYGPIKKIVMV---HNKVTG----KP-RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +G I++I ++ H G KP RGYAF+ +E E+DM +A + DG +I RR
Sbjct: 121 EFGRFGTIERIRIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALEGCDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTV+GW P
Sbjct: 181 IKVDVERGRTVEGWKP 196
>gi|353241024|emb|CCA72864.1| related to SNP1-U1 small nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 362
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 114/217 (52%), Gaps = 38/217 (17%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLL LFAPR P+PY P++K P+ + +G+AA L R E
Sbjct: 1 MTHLLPPNLLKLFAPRPPLPYARPIDKDPNVVRPKTVTGVAALLAAI----------REE 50
Query: 61 TREERLERRRRERAEQVAYKLEQEIAL---------------------------WDPNSF 93
+++ R E + + + L + P
Sbjct: 51 NTAGLIDQGRAEDEAGAVTEEDSKFTLAEETRREIRREEKKKKKVEDFKNAVNNYRPVDN 110
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P+A DP+KTLF+AR+ +E+ LRREFE++G I +I +V NK G RGYAFI YE E
Sbjct: 111 PDAQGDPYKTLFVARLPKKATENDLRREFEMFGVIARIKIVKNK-NGNSRGYAFIVYERE 169
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RDM AYK + ++ G+R+LVDVER RTV+GW PRR
Sbjct: 170 RDMKVAYKEGEHMQLLGKRILVDVERGRTVRGWKPRR 206
>gi|452819521|gb|EME26578.1| U1 small nuclear ribonucleoprotein 70kDa [Galdieria sulphuraria]
Length = 259
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 11/194 (5%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
+P ++ LF PR+P+PY+PP P ++K G+A L++ K R E E
Sbjct: 19 MPEAVMELFRPREPLPYIPP----PKKRKLRPLVGVAPLLDQISQYKQQVNRPRWEENGE 74
Query: 65 RLE----RRRRERAEQVAYKLEQEIALWD---PNSFPNATMDPFKTLFIARVNYDTSESK 117
E RR R+R E+ L+ + LW+ P S PNAT D KTLFIAR+ +T++ K
Sbjct: 75 TFETPAMRRERKRKEKREKFLQWKQKLWEQYSPPSEPNATSDAQKTLFIARLKPETTQLK 134
Query: 118 LRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 177
L+ E E +G +K+I + ++ TG P+GYAF+E++ ERDM A + +GK+IDG RV+VDV
Sbjct: 135 LQAELEAFGKVKEIKLPISQKTGLPKGYAFVEFQKERDMREALRALEGKRIDGARVIVDV 194
Query: 178 ERSRTVKGWLPRRL 191
E++RT K WLP++L
Sbjct: 195 EKARTTKNWLPKKL 208
>gi|425767063|gb|EKV05646.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
Pd1]
Length = 408
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ YLPP ++ P + + SG+A FL + + D P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYLPPSDRAPDDCQKSTISGVAQFLADAKTFADEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ R R + E+ EQ+ ++ + + + P P A DPFKTLF+ R+NY+ E+ L R
Sbjct: 61 SWVHRKLREKTEKKEQLEKQIAEGLKNYKPKENPQARGDPFKTLFVGRLNYEAKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + V+ K RGYAF+ +E E+DM +AYK + +I GR +VD
Sbjct: 121 EFGRFGPIERISIVKDTVSDKKKKPHRGYAFVVFEREKDMRAAYKETESLRIKGRLAVVD 180
Query: 177 VERSRTVKGWLP 188
VER RT KGW P
Sbjct: 181 VERGRTTKGWKP 192
>gi|425780249|gb|EKV18264.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
PHI26]
Length = 408
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ YLPP ++ P + + SG+A FL + + D P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYLPPSDRAPDDCQKSTISGVAQFLADAKTFADEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ R R + E+ EQ+ ++ + + + P P A DPFKTLF+ R+NY+ E+ L R
Sbjct: 61 SWVHRKLREKTEKKEQLEKQIAEGLKNYKPKENPQARGDPFKTLFVGRLNYEAKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + V+ K RGYAF+ +E E+DM +AYK + +I GR +VD
Sbjct: 121 EFGRFGPIERISIVKDTVSDKKKKPHRGYAFVVFEREKDMRAAYKETESLRIKGRLAVVD 180
Query: 177 VERSRTVKGWLP 188
VER RT KGW P
Sbjct: 181 VERGRTTKGWKP 192
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 109/169 (64%), Gaps = 2/169 (1%)
Query: 25 VEKLPHEKKTHGYSGIAAFLNEFEDPK--DTPPPTRVETREERLERRRRERAEQVAYKLE 82
V P E+KT +GI +FL++ ++ K D P ET + +R +RE+ KL+
Sbjct: 2 VNTAPKERKTAFITGIGSFLDKLKEYKQIDYPKEQFEETPVLKQQREKREKQLLNKQKLD 61
Query: 83 QEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKP 142
++ A W+P+ P+ DP+KTLF+ R+NY+ +E L++EF YG ++++ +V +K T K
Sbjct: 62 EDFAKWNPSEDPHIKGDPYKTLFVGRLNYEVTEIDLQKEFSKYGEVERVRVVRDKDTSKS 121
Query: 143 RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRL 191
+GYAFI ++H+ +AYK A+G KI GR ++ D+ERSRT K W+PRRL
Sbjct: 122 KGYAFILFDHDSSAKAAYKEANGLKIKGRAIITDIERSRTFKSWVPRRL 170
>gi|451851627|gb|EMD64925.1| hypothetical protein COCSADRAFT_25892 [Cochliobolus sativus ND90Pr]
Length = 387
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LL LFAPR P+ ++ P + P ++ T GIA +++ + KD +
Sbjct: 1 MTHLLPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVPTD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ++ +R++ E+ E+ + + + + P+ P D FKTLF++R++Y + L R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGITSDDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVT---GKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
EF YGPI++I +V + P RGYAFI +E E+DM +AYK DG KI RRV
Sbjct: 121 EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 174 LVDVERSRTVKGW 186
LVDVER RTV GW
Sbjct: 181 LVDVERGRTVSGW 193
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 21/206 (10%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEK-LPHEKKTHGYSGIAAFLNEFEDPKD-------- 52
T LPPNLL LFAPR P+PY P+++ + +K H +G+A L + K
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDRDIDRVRKKH-VNGVAQLLARLREDKTQGMIESGG 62
Query: 53 --------TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTL 104
P T E + + R R+ + +K+ +EI + P A DPFKTL
Sbjct: 63 SEGMEEGEEPAFTYAEETKRAIRRDERKAKKTEEFKIAKEI--YKPADDAEAVGDPFKTL 120
Query: 105 FIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
FIAR++ ++S LRREFE +G I+++ +V +K G+ RGYAFI +E ERDM +AYK +D
Sbjct: 121 FIARLHKSATDSDLRREFEGFGSIERVRIVRDK-RGRSRGYAFIVFERERDMKAAYKESD 179
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPRR 190
I G+RVLVDVER RTV+GW PRR
Sbjct: 180 RLHIMGKRVLVDVERGRTVRGWKPRR 205
>gi|453087961|gb|EMF16002.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 348
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 5/195 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF-EDPKDTPPPTRV 59
MT LP NLLALF PR P+ ++PP + P +++TH G+A F+ + ++ T
Sbjct: 1 MTDRLPHNLLALFQPRPPLRFMPPADFAPGDRRTHRIDGVAQFVPALKQKVEEAKTETIT 60
Query: 60 ETREERLERRRRERAEQVAYKLEQ-EIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
E ++ +R E+ + + LE+ ++ P N D FKTLF+ R+ YD + L
Sbjct: 61 ECGLQKRDRMMIEKQAKQKWLLEEGHKEMYKPGEDENIRGDAFKTLFVGRLPYDCTTKDL 120
Query: 119 RREFEVYGPIKKIVMVHN---KVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
+EF +GPI+++ +V + K GKPRGYAFI +E E+DM +AYK + +I GR VLV
Sbjct: 121 EKEFGRFGPIERVRIVTDRSEKAKGKPRGYAFILFEREKDMKAAYKECERLQIRGRMVLV 180
Query: 176 DVERSRTVKGWLPRR 190
DVER RTV GW PRR
Sbjct: 181 DVERGRTVTGWRPRR 195
>gi|310789384|gb|EFQ24917.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 406
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P ++T SG+A FL ++ K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPPDHAPESRRTLPVSGVAEFLPALQNYKETDEYKPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ + +R++ E+ V + + P+ PN D FKTL +AR++Y+ +E L R
Sbjct: 61 SWLQMRDRKKLEKQAAVERLKTEGPKNFKPHEDPNIRGDAFKTLIVARLSYEANEQDLER 120
Query: 121 EFEVYGPIKKIVMVHNK--------VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++ + RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIITDTHAHEKPRKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW+P
Sbjct: 181 IKVDVERGRTVKGWVP 196
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 4/186 (2%)
Query: 5 LPPNLLALFAPRDPVP-YLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETRE 63
LPP++ LF P P P YL P++ P +++T SG++A++ + P PT +
Sbjct: 24 LPPHIQRLF-PECPEPRYLEPIDYAPEDRRTQKISGVSAYMELLKQPDSEYVPTESWLVK 82
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
++ E+R + ++V + +E WDP DPFKTLF+AR+ +D +E+ L +
Sbjct: 83 QQREKRLKSERQKVTQQERKEA--WDPKKDDKIVGDPFKTLFVARLAFDVTENDLEEHYI 140
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTV 183
+GP+K + +V + +GK GY F+E++ E D A++ +G I GR+V+VDVER RTV
Sbjct: 141 KFGPVKHVRIVRDLKSGKSNGYGFVEFQEEDDFRKAFQMTNGSIIKGRKVVVDVERGRTV 200
Query: 184 KGWLPR 189
GWLPR
Sbjct: 201 SGWLPR 206
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 3/190 (1%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR--- 58
Q +P +L LF R P+ Y P+EK + + G+ + FED +T P +
Sbjct: 17 NQDMPHHLSILFRARPPLEYQKPIEKGRCKPLRSYFDGVRDYFAMFEDVNETEKPQQKQE 76
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
VE + + ER ++E+ ++++ W+P DPFKT+ ++R++Y T E L
Sbjct: 77 VEKSDVKKERIKKEKIIDHLVHQQEDLKQWNPYKDQKIKGDPFKTIVVSRLSYKTDEKTL 136
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
++EFEVYGPIK++ ++ ++ +GKP+GYAFIEY++ERD A + +G+++DG RV+VD E
Sbjct: 137 KKEFEVYGPIKRVRIIIDQHSGKPKGYAFIEYDNERDFQLALERGNGRRVDGARVVVDYE 196
Query: 179 RSRTVKGWLP 188
R RT W+P
Sbjct: 197 RGRTKTDWIP 206
>gi|342885914|gb|EGU85866.1| hypothetical protein FOXB_03714 [Fusarium oxysporum Fo5176]
Length = 391
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ +L P + P ++T +G+A FL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRFLDPPDYAPQHRRTAPITGVAQFLPELQKYKETDVYNPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ + +R++RE+ E++ L + PN PN D FKTL +AR++YD E L +
Sbjct: 61 SWLQARDRKKREKKEKLETLLREAPDHHKPNEDPNVRGDAFKTLMVARLSYDADERDLEK 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YGPI++I ++V KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRYGPIERIRIVVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGMRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 181 IKVDVERGRTVKGWKP 196
>gi|118488424|gb|ABK96027.1| unknown [Populus trichocarpa]
Length = 313
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 92/138 (66%), Gaps = 14/138 (10%)
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
MV +KV+ KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER RTV W PRRLG
Sbjct: 1 MVADKVSNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 60
Query: 193 GGLGGTRRGGPDVNLKHSGREDNE----------RERERYRLERERELAGGPPRARSGSN 242
GGLG TR GG +VN +H GRE + R RE ERERE++ R R
Sbjct: 61 GGLGTTRVGGEEVNQRHPGREVQQSGGLSRSEEPRTREDRHTEREREVS----RDRGRDR 116
Query: 243 DRERERERRRSRSRERKR 260
D+ERERE+ RS +R R
Sbjct: 117 DKEREREKSHERSHDRPR 134
>gi|400597493|gb|EJP65226.1| U1 small nuclear ribonucleoprotein [Beauveria bassiana ARSEF 2860]
Length = 400
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++ P + P ++KT G+AAFL + + K+ E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVQPPDHAPEKRKTPHVDGLAAFLPDLKAYKENDTSIPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++ E+ V + PN P D FKTL +AR++Y+ E L R
Sbjct: 61 SWLEARDRKKLEKKAAVEDLSANAPKYYKPNEDPLIRGDAFKTLIVARLSYEADERDLER 120
Query: 121 EFEVYGPIKK---IVMVHNKVTG----KP-RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++ +V H G KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERTRIVVDTHAAEKGNKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 181 IKVDVERGRTVKGWKP 196
>gi|358054541|dbj|GAA99467.1| hypothetical protein E5Q_06166 [Mixia osmundae IAM 14324]
Length = 375
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 121/214 (56%), Gaps = 36/214 (16%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPP-------------------VEKLPHEKKTHGYSGIA 41
MT LPPNLL LFAPR +PY P +E++ E+ G +
Sbjct: 1 MTSQLPPNLLKLFAPRPAIPYAKPLGRDIDRPLNKAIPGVFDVIERVRQERAERGEEALE 60
Query: 42 A---FLN--EFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNA 96
A LN F D D ++ R ER+RR+ + YK + + + P +A
Sbjct: 61 AEERSLNPEAFTDSAD------LKIANGRAERKRRK---EETYK--KALETYKPKEDEHA 109
Query: 97 TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
DP++T+FI+R++ D +E +LR+EF++YG I+ + ++ + K RGYAFI YE ERDM
Sbjct: 110 VGDPYRTIFISRLHRDATEEQLRKEFDLYGRIENLKIIRDSKE-KSRGYAFILYERERDM 168
Query: 157 HSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+AYK ADG KI G+R+LVDVER RTVKGW PRR
Sbjct: 169 KAAYKDADGLKILGKRILVDVERGRTVKGWKPRR 202
>gi|302666780|ref|XP_003024986.1| hypothetical protein TRV_00848 [Trichophyton verrucosum HKI 0517]
gi|291189065|gb|EFE44375.1| hypothetical protein TRV_00848 [Trichophyton verrucosum HKI 0517]
Length = 411
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 20/202 (9%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YL P+ + P + K SG+A +L+E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ EQ +LE+ +A ++P+ P DPF+TLF++R++YD E+ L R
Sbjct: 61 SWLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM--------------HSAYKHADGK 166
EF +++ + P Y+ +Y +++ + +AYK DG
Sbjct: 121 EF------GRVLNPEQPLHPLPIPYSTYKYSYDKVIKYMTNAIDRSCVTTTAAYKETDGI 174
Query: 167 KIDGRRVLVDVERSRTVKGWLP 188
+I RR LVDVER RTVKGW P
Sbjct: 175 RIKDRRALVDVERGRTVKGWKP 196
>gi|380492752|emb|CCF34374.1| U1 small nuclear ribonucleoprotein [Colletotrichum higginsianum]
Length = 417
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++ P + P ++T SG+A FL + K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVAPPDHAPESRRTLPVSGVAEFLPALQHYKETDDYKPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ + +R++ E+ V + + P+ PN D FKTL +AR++Y+ +E L R
Sbjct: 61 SWLQMRDRKKLEKQAAVESLKTEGPKNFKPHEDPNIRGDAFKTLIVARLSYEANEQDLER 120
Query: 121 EFEVYGPIKKIVMVHNK--------VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I ++ + RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRIITDTHAHEKPRKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW+P
Sbjct: 181 IKVDVERGRTVKGWVP 196
>gi|302497287|ref|XP_003010644.1| hypothetical protein ARB_03345 [Arthroderma benhamiae CBS 112371]
gi|291174187|gb|EFE30004.1| hypothetical protein ARB_03345 [Arthroderma benhamiae CBS 112371]
Length = 410
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ YL P+ + P + K SG+A +L+E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ EQ +LE+ +A ++P+ P DPF+TLF++R++YD E+ L R
Sbjct: 61 SWLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLER 120
Query: 121 EFE-VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM--------------HSAYKHADG 165
EF V P + T P Y+ +Y +++ + +AYK DG
Sbjct: 121 EFGRVLNPEQSF------STPFPIPYSTYKYSYDKVIKYMTNAIDRSCVTTTAAYKETDG 174
Query: 166 KKIDGRRVLVDVERSRTVKGWLP 188
+I RR LVDVER RTVKGW P
Sbjct: 175 IRIKDRRALVDVERGRTVKGWKP 197
>gi|451995589|gb|EMD88057.1| hypothetical protein COCHEDRAFT_1070524, partial [Cochliobolus
heterostrophus C5]
Length = 247
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LL LFAPR P+ ++ P + P ++ T GIA +++ + KD +
Sbjct: 1 MTHLLPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVPTD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ++ +R++ E+ E+ + + + + P+ P D FKTLF++R++Y + L R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGVTSDDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVT-------GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
EF YGPI++I +V + + RGYAFI +E E+DM +AYK DG KI RRV
Sbjct: 121 EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 174 LVDVERSRTVKGW 186
LVDVER RTV GW
Sbjct: 181 LVDVERGRTVSGW 193
>gi|219112155|ref|XP_002177829.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410714|gb|EEC50643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 10/193 (5%)
Query: 3 QFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETR 62
+PP+L A F P P+ ++PPV+ ++ H +G++ L+ FE K+T T
Sbjct: 1 MLIPPHLRATFMPNPPLLHIPPVQ----HRRKHPITGVSGLLSHFE--KETSERVLQPTP 54
Query: 63 EERLERRRRERAEQVAYKLEQEIALW----DPNSFPNATMDPFKTLFIARVNYDTSESKL 118
+ ERR+ + E+ +LE I + + + M+ + TLFI R+ Y+ +E KL
Sbjct: 55 QILKERRKALKQEKHQKELEPLIETYRKEQKESGGEHKGMNCYNTLFIGRLAYEVTERKL 114
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
RE E +GP+K I ++ + GK RGYAF+EYEHE DM AY+ ADG +I+GR ++VDVE
Sbjct: 115 LREMESFGPVKDIRIIKDSKEGKSRGYAFVEYEHEEDMKRAYRAADGIRIEGREIVVDVE 174
Query: 179 RSRTVKGWLPRRL 191
R TV WLPRRL
Sbjct: 175 RGHTVPSWLPRRL 187
>gi|429857182|gb|ELA32061.1| u1 small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 401
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 117/203 (57%), Gaps = 22/203 (10%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P ++KT SG+A FL + K+T +
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPPDHAPEKRKTLPVSGVAEFLPALQAYKET---DEYK 57
Query: 61 TREERLERRRRERAEQVAY--KLEQEIALWDPNSF-----PNATMDPFKTLFIARVNYDT 113
E L+ R R++ E+ A KL+ E P +F N D FKTL +AR++Y+
Sbjct: 58 PTESWLQMRDRKKLEKQAAVEKLKTE----GPKNFKPHEDSNIRGDAFKTLIVARLSYEA 113
Query: 114 SESKLRREFEVYGPIKKIVMVHNK--------VTGKPRGYAFIEYEHERDMHSAYKHADG 165
+E L REF +GPI++I ++ + RGYAF+ +E E+DM +A DG
Sbjct: 114 NEQDLEREFGRFGPIERIRIITDTHAHEKPRKKKKPHRGYAFVVFEREKDMRAALDACDG 173
Query: 166 KKIDGRRVLVDVERSRTVKGWLP 188
+I RR+ VDVER RTVKGW+P
Sbjct: 174 IRIKDRRIKVDVERGRTVKGWVP 196
>gi|330931076|ref|XP_003303260.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
gi|311320862|gb|EFQ88659.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
Length = 402
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LL LFAPR P+ ++ P + P ++ T GI +++ + KD +
Sbjct: 1 MTHLLPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVPTD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ++ +R++ E+ E+ + + + + P+ P D FKTLF++R+ Y + L R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 121 EFEVYGPIKKIVMVHN-------KVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
EF YGPI++I +V + + + RGYAFI +E E+DM +AYK DG KI RRV
Sbjct: 121 EFGRYGPIERIRIVEDVTQPADAPLKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 174 LVDVERSRTVKGWLPRR 190
LVDVER RTV GW PRR
Sbjct: 181 LVDVERGRTVSGWRPRR 197
>gi|67482015|ref|XP_656357.1| U1 small nuclear ribonucleoprotein subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473555|gb|EAL50974.1| U1 small nuclear ribonucleoprotein subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 509
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 25/209 (11%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEK--LPHEKKTHGYSGIAAFLNEFED--PKD---- 52
M LP N ALF P +P+ +LPPVEK P+ YSG++++L F++ P +
Sbjct: 1 MVCLLPKNFAALFVPDEPIRFLPPVEKHWFPN------YSGVSSYLTMFDELTPNNEKKT 54
Query: 53 ------TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
P T+ RE R + + E+A+ L +I WDP AT +P +T+ +
Sbjct: 55 EEIDSFAPTWTKSGLRELRFLKTKEEKAQS----LRTQIQTWDPTHNLKATDNPNRTIVV 110
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
R+ T ES L+R F YG IKKIV++ + + G +GYAF+EY H + A + A+G
Sbjct: 111 LRLPKKTDESILQRLFSEYGEIKKIVIIKD-LKGINKGYAFVEYNHRSEAERACRRANGM 169
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGL 195
+I+ + ++V++E+ RT + + P+RLGG +
Sbjct: 170 RIEEKIIVVEMEKGRTEESFKPKRLGGTI 198
>gi|156040914|ref|XP_001587443.1| hypothetical protein SS1G_11435 [Sclerotinia sclerotiorum 1980]
gi|154695819|gb|EDN95557.1| hypothetical protein SS1G_11435 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 456
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 29/217 (13%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P +KT SG+AA+L ++ K+T T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPSDHAPENRKTPAVSGLAAYLPALKEYKETDQYTPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R +E+ +++ + P+ PN D FKTL ++R++Y+ +E L R
Sbjct: 61 SWLQRKDRVTQEKKAAHEKIIQEAPKTFKPSEDPNIRGDAFKTLIVSRLDYEATEKDLER 120
Query: 121 EFEVYGPIKKIVMV--------HNKVTGKPRGYAFIEYEHERDM-----HSAY-KHADG- 165
EF +GPI++I +V K K RGYAF+ +E E+DM H+ Y + +G
Sbjct: 121 EFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMRGKAEHTLYPPYTNGI 180
Query: 166 --------------KKIDGRRVLVDVERSRTVKGWLP 188
I RR+ VDVER RTVKGWLP
Sbjct: 181 VAQLAHRFGVSTFLSLIKDRRIKVDVERGRTVKGWLP 217
>gi|225677479|gb|EEH15763.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 386
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 25/188 (13%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ Y+PP ++ P +K+ +G+A F++E + + P E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + ER ++ L + I ++PN+ P D FKTLF++R++YD E+ L R
Sbjct: 61 SWLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
EF +GPI++ +AYK DG +I RRVLVDVER
Sbjct: 121 EFGRFGPIER-------------------------SSAAYKETDGIRIKDRRVLVDVERG 155
Query: 181 RTVKGWLP 188
RTVKGW P
Sbjct: 156 RTVKGWKP 163
>gi|452845346|gb|EME47279.1| hypothetical protein DOTSEDRAFT_69274 [Dothistroma septosporum
NZE10]
Length = 353
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 115/199 (57%), Gaps = 11/199 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF----EDPKDTPPP 56
MT LPPNLLALF R P+ +LP + E++TH G+AAFL F E KD
Sbjct: 1 MTAQLPPNLLALFQSRPPLRFLPHHDYPQEERRTHQIDGLAAFLPAFKEKVEAEKDDVVT 60
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSES 116
V ++E + ++E+ + + QE L+ PN N D FKTLF++R++YDTS
Sbjct: 61 YSVMQKKENDKLEKQEKQKYLMEHGHQE--LYKPNEDANIRGDAFKTLFVSRMSYDTSTK 118
Query: 117 KLRREFEVYGPIKKIVMVHNKVTGKPRG-----YAFIEYEHERDMHSAYKHADGKKIDGR 171
L +EF +GPI+++ +V ++ + Y F+ +E E+DM +AYK + I GR
Sbjct: 119 DLEKEFGRFGPIERVRIVQDRGEKSKKKGKSRGYGFVLFEKEKDMKTAYKDCENLTIRGR 178
Query: 172 RVLVDVERSRTVKGWLPRR 190
RVLVDVER RTV GW PRR
Sbjct: 179 RVLVDVERGRTVNGWRPRR 197
>gi|321251142|ref|XP_003191972.1| U1 snRNP 70K protein (short form) [Cryptococcus gattii WM276]
gi|317458440|gb|ADV20185.1| U1 snRNP 70K protein (short form), putative [Cryptococcus gattii
WM276]
Length = 435
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 52/240 (21%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPV---EKLPHEKKTHGYSGIAAFLNE------FEDPK 51
M+ LPPNLL LFAPR P+L P+ E++ G +G+A + E +
Sbjct: 1 MSHLLPPNLLKLFAPRPQPPFLKPLTRDERIRGPNNLGGVAGLAKRIKEEAEDAEVKQGM 60
Query: 52 DTPPPTRV-ETREERLERRRRERAE----------------------------QVAYKLE 82
D P + E +EE ++ ++ E + A KL
Sbjct: 61 DLNPEKALDEQKEENVKTELKQDGEDGEVAEDSGKDRKKKTARDKIAEMGIIGEEAVKLR 120
Query: 83 QEI-------------ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIK 129
+E+ A + P A DP+KTLFI+R++ +E+ LRREFE+YGPI+
Sbjct: 121 KELRKKRQEEYKKSAEANYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIE 180
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+I +V N+ GK GYAFI YE ERDM +AYK A+G I +++LVDVER RTVKGW P+
Sbjct: 181 RIRIVRNR-KGKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|405117502|gb|AFR92277.1| U1 snRNP 70K protein [Cryptococcus neoformans var. grubii H99]
Length = 435
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 52/240 (21%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPV---EKLPHEKKTHGYSGIA------AFLNEFEDPK 51
M+ LPPNLL LFAPR P+L P+ E++ G +G+A A E +
Sbjct: 1 MSHLLPPNLLKLFAPRPQPPFLKPLTRDERIRGPNNLGGVAGLARRIKEEAEDAEVKQGM 60
Query: 52 DTPPPTRV-ETREERLERRRRERAE----------------------------QVAYKLE 82
D P + E +EE ++ ++ E + A K+
Sbjct: 61 DVNPQKALDEQKEENVKMELKQDGEDGEVAEDSTKDKKKKTARDKIAEMGIIGEEAVKMR 120
Query: 83 QEI-------------ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIK 129
+E+ + + P A DP+KTLFI+R++ +E+ LRREFE+YGPI+
Sbjct: 121 KELRKKRQEEYKKNAESNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIE 180
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+I +V N+ GK GYAFI YE ERDM +AYK A+G I +++LVDVER RTVKGW P+
Sbjct: 181 RIRIVRNR-KGKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|162458369|ref|NP_001105268.1| U1 snRNP [Zea mays]
gi|49343280|gb|AAT64947.1| U1 snRNP [Zea mays]
gi|49343293|gb|AAT64948.1| U1 snRNP [Zea mays]
gi|413934406|gb|AFW68957.1| U1 snRNP isoform 1 [Zea mays]
gi|413934407|gb|AFW68958.1| U1 snRNP isoform 2 [Zea mays]
Length = 193
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 11/153 (7%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF---EDPKDTPPPTRVET 61
L PNLL LF PR P+ Y PP+EK +K Y+G+A F++ F EDP+ PP + ET
Sbjct: 42 LTPNLLKLFEPRPPLEYKPPLEK----RKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCET 97
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
R E+ R R + EQ A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 98 RAEKKARIRNNKLEQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKRE 157
Query: 122 FEVYGPIKK----IVMVHNKVTGKPRGYAFIEY 150
FE YGPIK+ ++ V K+ + Y F +
Sbjct: 158 FEGYGPIKRVSNVVIPVQVKLLHFGKVYGFFNH 190
>gi|412989201|emb|CCO15792.1| U1 small nuclear ribonucleoprotein 70 kDa [Bathycoccus prasinos]
Length = 643
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 83 QEIALWDPNSFPNATMDPFKTLFIARVNYDTSESK--LRREFEVYGPIKKIVMVHNKVTG 140
+ + WDP+ AT DP+ TLF+AR+ Y E + LRREFE YG IK I +V + TG
Sbjct: 221 EALKAWDPHKDEKATGDPYATLFVARLPYAACEDEDVLRREFERYGDIKAIRIVRDTDTG 280
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGG 197
KP GYAFIE+E E DM A+ ADG +I+G+RV+VD ER RT W P RLGGGLGG
Sbjct: 281 KPTGYAFIEFETEDDMKRAFARADGTRIEGKRVIVDAERGRTTPNWRPMRLGGGLGG 337
>gi|189199498|ref|XP_001936086.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983185|gb|EDU48673.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 408
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LL LFAPR P+ ++ P + P ++ T GI +++ + KD +
Sbjct: 1 MTHLLPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVPTD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ++ +R++ E+ E+ + + + + P+ P D FKTLF++R+ Y + L R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 121 EFEVYGPIKKIVMVHNK-------VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
EF YGPI++I +V + + + RGYAFI +E E+DM +AYK DG KI RRV
Sbjct: 121 EFGRYGPIERIRIVEDVTQPADAPLKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 174 LVDVERSRTVKGWLPRR 190
LVDVER RTV GW PRR
Sbjct: 181 LVDVERGRTVSGWRPRR 197
>gi|302798549|ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
gi|300151088|gb|EFJ17735.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
Length = 246
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Query: 93 FPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEH 152
P+ + I R+ +++ ++ + ++ +VH+K + KPRGYAFIEY H
Sbjct: 1 MPSCLPCGIACILIVRLVCALQSARIVLLNALF--VLQVRLVHDKDSNKPRGYAFIEYFH 58
Query: 153 ERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGR 212
RDM +AYK ADG+KID RRVLVDVER RTV W PRRLGGGLG TR GG +VN K+SGR
Sbjct: 59 TRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGDEVNQKYSGR 118
Query: 213 E 213
E
Sbjct: 119 E 119
>gi|58258329|ref|XP_566577.1| U1 snRNP 70K protein (short form) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222714|gb|AAW40758.1| U1 snRNP 70K protein (short form), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 429
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 52/240 (21%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPV---EKLPHEKKTHGYSGIAAFLNEFEDPKDT---- 53
M+ LPPNLL LFAPR P+L P+ E++ G +G+A + E + +
Sbjct: 1 MSHLLPPNLLKLFAPRPQPPFLKPLTRDERIRGPNNLGGVAGLAKRIKEEAEDAEVKQGM 60
Query: 54 ---PPPTRVETREERLERRRRERAE----------------------------QVAYKLE 82
P E +EE ++ ++ E + A K+
Sbjct: 61 GMNPEKALDEQKEENVKMELKQDGEDGEVAEDSGKEKKKKTARDKIAEMGIIGEEAVKMR 120
Query: 83 QEI-------------ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIK 129
+E+ + + P A DP+KTLFI+R++ +E+ LRREFE+YGPI+
Sbjct: 121 KELRKKRQEEYKKNAESNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIE 180
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+I +V N+ GK GYAFI YE ERDM +AYK A+G I +++LVDVER RTVKGW P+
Sbjct: 181 RIRIVRNR-KGKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|134106223|ref|XP_778122.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260825|gb|EAL23475.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 52/240 (21%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPV---EKLPHEKKTHGYSGIAAFLNEFEDPKDT---- 53
M+ LPPNLL LFAPR P+L P+ E++ G +G+A + E + +
Sbjct: 1 MSHLLPPNLLKLFAPRPQPPFLKPLTRDERIRGPNNLGGVAGLAKRIKEEAEDAEVKQGM 60
Query: 54 ---PPPTRVETREERLERRRRERAE----------------------------QVAYKLE 82
P E +EE ++ ++ E + A K+
Sbjct: 61 GMNPEKALDEQKEENVKMELKQDGEDGEVAEDSGKEKKKKTARDKIAEMGIIGEEAVKMR 120
Query: 83 QEI-------------ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIK 129
+E+ + + P A DP+KTLFI+R++ +E+ LRREFE+YGPI+
Sbjct: 121 KELRKKRQEEYKKNAESNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIE 180
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+I +V N+ GK GYAFI YE ERDM +AYK A+G I +++LVDVER RTVKGW P+
Sbjct: 181 RIRIVRNR-KGKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|87130531|gb|ABD23909.1| U1 small nuclear ribonucleoprotein 70K splice variant 1 [Oryza
sativa Japonica Group]
gi|87130533|gb|ABD23910.1| U1 small nuclear ribonucleoprotein 70K splice variant 2 [Oryza
sativa Japonica Group]
Length = 220
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 91/130 (70%), Gaps = 7/130 (5%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVET 61
L PNLL LF PR P+ + PPVEK +K Y+G+A F+++F +P D PP ET
Sbjct: 43 LTPNLLKLFEPRPPLDFKPPVEK----RKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCET 98
Query: 62 REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRRE 121
+ E+ +R R+ + +Q A K+ +E+ +DP S PNAT DP+KTLF+AR+NY+TSE +++RE
Sbjct: 99 KAEKKDRIRKSKLDQGAAKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKRE 158
Query: 122 FEVYGPIKKI 131
FE YGPIK++
Sbjct: 159 FEAYGPIKRV 168
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 19/205 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD--------- 52
T LPPNLL LFAPR P+PY P+++ + G L + K
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVDGAGQLLARLREEKTQGMMNSGEG 63
Query: 53 -------TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLF 105
P T E + ++ R R++ + +++ +E + P P A DP+KTLF
Sbjct: 64 EGMEEGEEPNFTHAEETKRQMRREERKKKKTEEFRIAKES--YKPADDPEAVGDPYKTLF 121
Query: 106 IARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADG 165
IAR++ +E LRREFE +G I+++ +V +K G+ +GYAFI +E ERDM +AYK +D
Sbjct: 122 IARLHKSATEGDLRREFEGFGSIERVRIVRDK-NGRSQGYAFIVFERERDMKAAYKESDR 180
Query: 166 KKIDGRRVLVDVERSRTVKGWLPRR 190
I G+RVLVDVER RTV+GW PRR
Sbjct: 181 LHIMGKRVLVDVERGRTVRGWKPRR 205
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 117/219 (53%), Gaps = 29/219 (13%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKT----------------HGYSGIAAFL 44
MT LPP+LL LFA R P+ Y P+ P+ T +G+AA L
Sbjct: 1 MTHLLPPSLLRLFAARPPLEYAAPLVYDPNPNATPLPKDRSLISKRKSIRSPLTGVAATL 60
Query: 45 ----NEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKL--------EQEIALWDPNS 92
E D ++ E+ + R AE A ++ + + P+
Sbjct: 61 ELVKQEAADRGESTDDIAHESSSANMTLARVTLAEMDAEAKKAAKAEVKQRGLEEYKPHD 120
Query: 93 FPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEH 152
AT D +KTLF+AR+ YD +E L REF++YGPI+ I +V ++ GK RGYAFI YE
Sbjct: 121 NAEATPDAYKTLFLARLAYDVTEKDLHREFDMYGPIETIRLVRDR-EGKSRGYAFIAYER 179
Query: 153 ERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRL 191
ERDM +A+K A+G KI+GRRV+VDVER RTVK W P RL
Sbjct: 180 ERDMRAAWKDAEGIKINGRRVMVDVERGRTVKDWKPTRL 218
>gi|356567272|ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
Length = 347
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 130/265 (49%), Gaps = 12/265 (4%)
Query: 80 KLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT 139
+L I L+DP P AT DP+ TLF+AR++ T+E LR+ YG +K + +V + VT
Sbjct: 41 QLCSSIGLYDPFGDPKATGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVT 100
Query: 140 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTR 199
G RGYAF+EYE ER+M AY A +D ++VD R + + GW+PRRLGGGL G +
Sbjct: 101 GASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKK 160
Query: 200 RGGPDVNLKHSGREDNERERERYRLERERELAGGPP----RARSGSNDRERERERRRSRS 255
G L+ GRE R + E + G PP R S R R
Sbjct: 161 ESG---QLRFGGREKPFRAPLKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRSERSLSD 217
Query: 256 RERKRRTSRSRSRDRRRRRSRERIRDD-DIEEVEFRPKDRSDRDRDRDRKRRRERENSED 314
RE + R S DR R ++ + +R DIEE + RS RD + R E S
Sbjct: 218 REEDSHSHRRGSNDRNRNKTEDGLRSSVDIEEGHY----RSSSHRDNHSRGRSSMERSGR 273
Query: 315 RNERKRDRKERRKERERNNEEREEK 339
++R KE R + ++ +K
Sbjct: 274 YHDRSSSEKEHRHGSSTDKDKHSQK 298
>gi|167382928|ref|XP_001736333.1| U1 small nuclear ribonucleoprotein 70 kDa [Entamoeba dispar SAW760]
gi|165901504|gb|EDR27587.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
dispar SAW760]
Length = 422
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 25/209 (11%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEK--LPHEKKTHGYSGIAAFLNEFE--DPKD---- 52
M LP N ALF P +P+ +LPP+EK P+ YSG++++L F+ +P +
Sbjct: 1 MVCLLPKNFAALFVPDEPIRFLPPIEKHWFPN------YSGVSSYLTMFDQIEPNNEKKT 54
Query: 53 ------TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
P T+ RE R + + E+ L +I WDP AT +P +T+ +
Sbjct: 55 EGADSFAPTWTKSGLRELRFLKMKEEKTRS----LRTQIQTWDPTHNLKATDNPNRTIVV 110
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
R+ T ES L++ F YG IKKIV++ + + G +GYAF+EY H + A + A+G
Sbjct: 111 LRLPKKTDESILQQLFGEYGEIKKIVIIKD-LKGINKGYAFVEYNHRSEAERACRRANGM 169
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGL 195
+I+ + ++V++E+ RT + + P+RLGG +
Sbjct: 170 RIEEKIIVVEMEKGRTEESFKPKRLGGTI 198
>gi|46124653|ref|XP_386880.1| hypothetical protein FG06704.1 [Gibberella zeae PH-1]
Length = 393
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ ++ + P +KT SG+A FL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRWVEAPDYAPQNRKTAPISGVAQFLPELQKYKETDVYHPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R++RE+ E++ + + + P+ N D FKTL +AR++Y+ E L +
Sbjct: 61 SWLQRRDRKKREKKEKLESLVTEAPEHYRPDKDTNIRGDAFKTLIVARLSYEADEKDLEK 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I V+ KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRAALDSCDGMRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 181 IKVDVERGRTVKGWRP 196
>gi|255953297|ref|XP_002567401.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589112|emb|CAP95234.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 4/192 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LLALF PR P+ YLPP ++ P + + SG+A FL + + + P E
Sbjct: 1 MTDKLPPPLLALFQPRPPLRYLPPSDRAPDDCQKSTLSGVAQFLTDAKAFAEEVPYNATE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R R + E+ E++ ++ + + ++P+ P DPFKT+F++R++YDT E+ L R
Sbjct: 61 SVMQRKLREKAEKKEKLEKQITEGLQNYNPDKDPQVRGDPFKTIFVSRLSYDTKETDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP----RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
EF +GPI++I +V + V+ K RGY F+ +E E+DM +AYK + I GR V+VD
Sbjct: 121 EFGRFGPIERISIVKDTVSDKKKKPHRGYGFVVFEREKDMKAAYKETENLSIRGRPVVVD 180
Query: 177 VERSRTVKGWLP 188
VER RT KGW P
Sbjct: 181 VERGRTTKGWKP 192
>gi|408398954|gb|EKJ78079.1| hypothetical protein FPSE_01540 [Fusarium pseudograminearum CS3096]
Length = 399
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ ++ + P +KT SG+A FL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRWVEAPDYAPQNRKTAPISGVAQFLPELQKYKETDVYHPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R++RE+ E++ + + + P+ N D FKTL +AR++Y+ E L +
Sbjct: 61 SWLQRRDRKKREKKEKLENLVTEAPEHYRPDKDTNIRGDAFKTLIVARLSYEADEKDLEK 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF +GPI++I V+ KP RGYAF+ +E E+DM +A DG +I RR
Sbjct: 121 EFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRAALDSCDGMRIKDRR 180
Query: 173 VLVDVERSRTVKGWLP 188
+ VDVER RTVKGW P
Sbjct: 181 IKVDVERGRTVKGWRP 196
>gi|47207553|emb|CAF91719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 280
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/88 (85%), Positives = 81/88 (92%)
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+I +V+NK TGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PR
Sbjct: 1 QIYIVYNKRTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 60
Query: 190 RLGGGLGGTRRGGPDVNLKHSGREDNER 217
RLGGGLGGT+RGG DVN+KHSGR+D R
Sbjct: 61 RLGGGLGGTKRGGADVNIKHSGRDDASR 88
>gi|331249519|ref|XP_003337376.1| hypothetical protein PGTG_18970 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 545
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 116/199 (58%), Gaps = 34/199 (17%)
Query: 11 ALFAPRDPVPYLPPVEKLP----HEKKTHGYSGI-------AAFLNEF--------EDPK 51
LFAPR P+PY P+ + P H+K S + AA NE +DP
Sbjct: 116 GLFAPRPPLPYSKPLGRDPDVSIHKKHISCVSPLLDRLKLEAASTNEDGVNQENGEKDPL 175
Query: 52 D--TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARV 109
PP T ++ + R ERR+ ER + +L +E +DP PNAT DP++TLFI+R+
Sbjct: 176 VDRMPPETLTDSMQVRFERRQEERRRRKEEQLARE-ENYDPKQDPNATGDPYRTLFISRL 234
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
+Y+ +ES L+REF++YGPI K+V+V NK+TGK G A AYK A+G KI
Sbjct: 235 SYEVTESDLKREFDMYGPIDKLVIVKNKLTGKSPGMA------------AYKDAEGLKIK 282
Query: 170 GRRVLVDVERSRTVKGWLP 188
GRR+LVDVER RTVKGW P
Sbjct: 283 GRRILVDVERGRTVKGWKP 301
>gi|356524599|ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
Length = 358
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 142/301 (47%), Gaps = 43/301 (14%)
Query: 80 KLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT 139
+L I L+DP P A DP+ TLF+AR++ T+E LR+ YG +K +V + VT
Sbjct: 41 QLCSSIGLYDPFGDPRAAGDPYCTLFVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVT 100
Query: 140 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTR 199
G RGYAF+EYE ER+M AY A +D ++VD R + + GW+PRRLGGGL G +
Sbjct: 101 GASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKK 160
Query: 200 RGGPDVNLKHSGREDNERERERYRLERERELAGGPP------------------------ 235
G L+ G+E R + E + G PP
Sbjct: 161 ESG---QLRFGGKEKPFRAPLKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRRERNLSD 217
Query: 236 ------RARSGSNDRERERERRRSRS--RERKRRTSRSRSRDRRRRRSRE---RIRDDDI 284
R GSNDR R + RS E R+S R R R S E R D
Sbjct: 218 REEDSHSHRRGSNDRNRTEDSHRSSVDIGEGHCRSSSHRDDHSRGRSSLERSGRYHDRSS 277
Query: 285 EEVEFRPKDRSDRDRDRDRKRRRERENSED----RNERKRDRKER-RKERERNNEEREEK 339
E E R + +D+D+ +++ +R +SE R+ +D+ R RKE +R++ E+E
Sbjct: 278 SEKEHRYRSSTDKDKHSQKRKESDRSSSEKEHQYRSSTDKDKHSRKRKESDRSSPEKEHG 337
Query: 340 V 340
+
Sbjct: 338 L 338
>gi|357508099|ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
gi|355499353|gb|AES80556.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
Length = 566
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Query: 80 KLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT 139
+L I L+DP P AT DP+ TLF+ R++ T+E LR+ +G +K + +V + VT
Sbjct: 41 QLCSSIGLYDPFGDPKATGDPYCTLFVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVT 100
Query: 140 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTR 199
G RGYAF+E+E ER+M AY A +D ++VD R + + GW+PRRLGGGL G +
Sbjct: 101 GASRGYAFVEFETEREMRRAYMDAHHLIVDDCEIIVDYNRQQLMPGWIPRRLGGGLSGNK 160
Query: 200 RGGPDVNLKHSGRE 213
G L+ GRE
Sbjct: 161 ESG---QLRFGGRE 171
>gi|393241484|gb|EJD49006.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 363
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 111/212 (52%), Gaps = 22/212 (10%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF--EDPKDTPPPTR 58
MT LPPNLL LFAPR P+PY+ P++K + G+A L E+ T R
Sbjct: 1 MTHLLPPNLLKLFAPRPPLPYMRPLDKDVDRVRAKHMDGMAEILARVREENALGTGVGKR 60
Query: 59 VETREERLERRRRERAEQVAYK-------------------LEQEIALWDPNSFPNATMD 99
E+ E E ++ A + P+ A D
Sbjct: 61 AANGEDTAMEEGEEVEEPFTLAEEYRRQVRREERRKRKEDEFQRAKASYKPSEDTEAVGD 120
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P+KTLFIAR++ + +++ LRR FE YGPI+++ + +K G+ RGYAFI ++ ERDM A
Sbjct: 121 PYKTLFIARLSKNAADADLRRAFESYGPIERVRIARDK-KGRSRGYAFIVFDRERDMKVA 179
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRL 191
YK AD I G+ +LVDVER RTV+ W PRRL
Sbjct: 180 YKEADKMVILGKAILVDVERGRTVRDWKPRRL 211
>gi|340502463|gb|EGR29151.1| u1 small nuclear ribonucleoprotein 70 kda, putative
[Ichthyophthirius multifiliis]
Length = 464
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 124/217 (57%), Gaps = 17/217 (7%)
Query: 54 PPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDT 113
PP +VET E+++R ++E+ ++ ++Q + W+P T DP+KTL + ++Y+
Sbjct: 159 PPLAKVETPREKIKREKQEKRQKQKQLIKQNLMEWNPFEDSKITSDPYKTLVLNNISYNA 218
Query: 114 SESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
+E K++ F++YGPIK ++ N + K RGY IE+E D AYK+A KKIDGRR+
Sbjct: 219 NEQKIKEHFKMYGPIKSCRIIRN-LNQKHRGYGIIEFERTADFIQAYKNAHEKKIDGRRI 277
Query: 174 LVDVERSRTVKGWLPRRLGGGLGGTRRG-GPDVNLKHSGREDNERERERYRLERERELAG 232
VD+ER RT+ + P RLGGGLG TR+G PD + K S + R R R +
Sbjct: 278 GVDIERGRTILRFRPMRLGGGLGITRKGKSPDNDYKRSLSQIQSRSRSRDSYD------- 330
Query: 233 GPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRD 269
+ RE++ ++ + + + + SRSRS+D
Sbjct: 331 --------DSVREKKIDKHKKKRYSKTKSKSRSRSKD 359
>gi|401889211|gb|EJT53150.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 2479]
gi|406698908|gb|EKD02129.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 8904]
Length = 334
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 118/225 (52%), Gaps = 45/225 (20%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFED----------- 49
MT LPPNLL LFAPR P+ YLPP+ K ++ + +GIAA + + D
Sbjct: 1 MTAKLPPNLLRLFAPRPPLNYLPPMSKDTSDRGPNKITGIAALVKQLRDQAEDDEVKQGL 60
Query: 50 ----------PKDTPPP--TRVETREERLERRRRERAEQV-AYKLEQEIALW-------- 88
P DT P +VE++ + +++++ A + QE +
Sbjct: 61 EERKEEVKDEPMDTDKPEDGQVESKPDVDADKKKKKDPIAEAGVIGQEAVMMRREAKKKQ 120
Query: 89 -------DPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
++P T+ FI+R++ +E+ LR EFE+YG I+KI +V +K GK
Sbjct: 121 QKEYKENLEKTYPYKTL------FISRLSSKATEADLRHEFEMYGHIEKIRIVRDKRKGK 174
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
R YAFI +E ERDM +AYK ADG I +++LVDVER RTVKGW
Sbjct: 175 SRNYAFIVFERERDMKAAYKDADGIPIHHKKILVDVERGRTVKGW 219
>gi|254570158|ref|XP_002492189.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031986|emb|CAY69909.1| hypothetical protein PAS_chr2-2_0449 [Komagataella pastoris GS115]
gi|328351324|emb|CCA37723.1| U1 small nuclear ribonucleoprotein 70 kDa [Komagataella pastoris
CBS 7435]
Length = 295
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 110/187 (58%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREE 64
PP + LF P+ P +L PV+ +++T G+ L+ + + P T E ++
Sbjct: 25 FPPVIAKLFEPKPPFKFLEPVDYPIEQRRTKIVKGVGGLLDLVKKYNEEVPYTVTEGNQQ 84
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R +R ++E+ + A KL++++A W+P N D +T+F+AR++Y+++E L+ V
Sbjct: 85 RQQRLKQEKRKLEAEKLQRDLAAWNPEKDLNMIGDASRTIFVARLDYNSTEVDLQNSLGV 144
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVK 184
+G I +I +V + T K +GY F+ ++ D +AY+++ KI+ R VLVD+ER RTVK
Sbjct: 145 FGEIDRIRVVRDVNTDKSKGYGFVVFKQPDDARTAYRNSSSLKINNRPVLVDIERGRTVK 204
Query: 185 GWLPRRL 191
W PRRL
Sbjct: 205 NWKPRRL 211
>gi|302917047|ref|XP_003052334.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
gi|256733273|gb|EEU46621.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
Length = 431
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 112/226 (49%), Gaps = 38/226 (16%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFA R P+ ++ P + P +KT SG+A FL E + K+T E
Sbjct: 1 MTDKLPPNLLALFAARPPLRWVEPPDHAPQNRKTAPISGVAQFLPELQKYKETDVYNPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ + +R+++E+ + + + Q L+ PN PN D FKTL +AR++YD E L +
Sbjct: 61 SWLQARDRKKQEKKQDLEELVTQAPKLYKPNEDPNVRGDAFKTLIVARLSYDADERDLEK 120
Query: 121 EFEVYGPIKKI-VMVHNKVTGKP-------RGYAFIEYEHERDM----------HSAYKH 162
EF +GPI++I ++V KP RGYAF+ +E E+DM Y
Sbjct: 121 EFGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRERGPQACPFFKVYGE 180
Query: 163 ADGKK--------------------IDGRRVLVDVERSRTVKGWLP 188
G RR+ VDVER RTVKGW P
Sbjct: 181 TQGPSSLPVSAIPFLLSTHSARKVLFMDRRIKVDVERGRTVKGWRP 226
>gi|115480119|ref|NP_001063653.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|50725348|dbj|BAD34420.1| ribonucleoprotein antigen-like [Oryza sativa Japonica Group]
gi|113631886|dbj|BAF25567.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|215704450|dbj|BAG93884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641906|gb|EEE70038.1| hypothetical protein OsJ_29992 [Oryza sativa Japonica Group]
Length = 375
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP P AT DP+ T+F+ R++ T + LR+E YG +K + +V + VTG
Sbjct: 44 LCSTAGLYDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKEMSRYGRVKSMRLVRDIVTG 103
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
RGYAF+EYE +R+M AY+ A IDG VLVD R + + GW+PRR GGGLGG +
Sbjct: 104 ASRGYAFVEYETDREMRRAYEDAHHSIIDGSEVLVDYYRQQLMPGWIPRRSGGGLGGKKE 163
Query: 201 GGPDVNLKHSGRE 213
G L+ GRE
Sbjct: 164 SG---QLRFGGRE 173
>gi|169625439|ref|XP_001806123.1| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
gi|160705655|gb|EAT76571.2| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
Length = 386
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 107/194 (55%), Gaps = 15/194 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPP LL LFAPR P+ ++ P + P ++ T SGI +L ++ KD +
Sbjct: 1 MTDKLPPMLLNLFAPRPPLRWVEPSDHAPEKRCTPKISGIGQYLQAMKEYKDNDGYVPTD 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ ++ +R++ E+ E+ L + I + P+ P D FKTLF++R+ Y + L R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLLSEGIHQYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 121 EFEVYGPIKKIVMVHNKVTGKP--------RGYAFIEYEHERDMHSAYKHADGKKIDGRR 172
EF YGPI++I +V + +T P RGYAFI YE YK DG KI RR
Sbjct: 121 EFGRYGPIERIRIVED-ITAPPDAPPKKRKRGYAFIVYE------PPYKETDGIKIKDRR 173
Query: 173 VLVDVERSRTVKGW 186
VLVDVER RTV GW
Sbjct: 174 VLVDVERGRTVSGW 187
>gi|47212120|emb|CAG06222.1| unnamed protein product [Tetraodon nigroviridis]
Length = 111
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/110 (67%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-THGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK Y GIA F+ FEDP+D PPPTR
Sbjct: 2 MTQFLPPNLLALFAPRDPIPFLPQLVKLPHEKHYNQPYCGIAPFIRHFEDPRDAPPPTRA 61
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARV 109
ETREERLER+RRE+ E+ LE E+ LWDP++ PNA D FKTLF+ARV
Sbjct: 62 ETREERLERKRREKIERRQTVLETELKLWDPHNDPNAQGDAFKTLFVARV 111
>gi|118356855|ref|XP_001011681.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila]
gi|89293448|gb|EAR91436.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila
SB210]
Length = 302
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 84 EIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
E+ W+P T DP+KTL I ++Y+ +ESKL+ F+VYGPIK ++ N+ K R
Sbjct: 175 EMQSWNPFDDQKQTSDPYKTLLIFNISYNVNESKLKEHFKVYGPIKSCRIIRNQ-NQKHR 233
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLG 196
GY FIE+E + D SAYK+A KKIDGRR+ VD+ER RT+ + PRR GGGLG
Sbjct: 234 GYGFIEFERKNDFISAYKNAHEKKIDGRRIGVDIERGRTILSFRPRRFGGGLG 286
>gi|300121567|emb|CBK22085.2| unnamed protein product [Blastocystis hominis]
Length = 390
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 97 TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+P+KTLF+ R+ YDT+E L + F YG ++ + ++ + VTG RGY F+E+ HE D
Sbjct: 54 CCNPYKTLFVGRLKYDTTEEALYQFFSRYGKLQSVHLIRDLVTGCSRGYGFVEFVHEEDF 113
Query: 157 HSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE--- 213
SA+ A +DG ++LVD R++TV GW+PRRLGGG+GG ++ G ++ GR+
Sbjct: 114 TSAFYGAHRTILDGSQILVDFMRAQTVPGWVPRRLGGGVGGKKQSG---QMRFGGRDCPF 170
Query: 214 DNERERERY-RLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRR 272
E R+ + + +GG P R GS E+E R + R++R R D R
Sbjct: 171 HAPYESNRFIKKPNSGDASGGKPSDRRGSGKEFDEKEDGRYEDKRREKREEDGRYHDDRS 230
Query: 273 R 273
R
Sbjct: 231 R 231
>gi|171686398|ref|XP_001908140.1| hypothetical protein [Podospora anserina S mat+]
gi|170943160|emb|CAP68813.1| unnamed protein product [Podospora anserina S mat+]
Length = 216
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 111/201 (55%), Gaps = 15/201 (7%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALF PR P+ ++PP +K P ++KT SG+A FL E+ K+ P T E
Sbjct: 1 MTDRLPPNLLALFTPRPPLRWVPPCDKAPEQRKTATISGVADFLPAMEEYKEI-PYTPTE 59
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++RE+ E + L + + PN PN D FKTL +AR++Y+ E L R
Sbjct: 60 SWLEARDRKQREKKEALEKLLTEGPLNYKPNEDPNIRGDAFKTLIVARLDYNADEKDLER 119
Query: 121 EFEVYGPI---KKIVMV-----HNKVTGKP---RGYAFIEYEHERDMHSAYKHADG-KKI 168
EF +GPI K+I +V H K KP RGYAF+ YE E+DM H
Sbjct: 120 EFGRFGPIERSKQIRIVRDTHAHEKPNKKPKPHRGYAFVVYEREKDMRGNIAHIQTILHH 179
Query: 169 DGRRVLVDVERSRTVKGWLPR 189
RRVLV RS + LPR
Sbjct: 180 HVRRVLVF--RSHGAQECLPR 198
>gi|449279308|gb|EMC86943.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Columba
livia]
Length = 254
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 5/129 (3%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T+E KL+ F YG I+KI +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEAFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY+ ER + A++ A+ ID + VD E RT+KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELERTLKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGRE 213
L+ GR+
Sbjct: 152 -QLRFGGRD 159
>gi|224161968|ref|XP_002188436.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Taeniopygia guttata]
Length = 265
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 5/129 (3%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T+E KL+ F YG I+KI +V + VTG +G
Sbjct: 36 MARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY+ ER + A++ A+ ID + VD E RT+KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELERTLKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGRE 213
L+ GR+
Sbjct: 152 -QLRFGGRD 159
>gi|326929594|ref|XP_003210944.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Meleagris gallopavo]
Length = 265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 5/129 (3%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T+E KL+ F YG I+KI +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY+ ER + A++ A+ +D V VD E RT+KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVVDQHEVFVDFELERTLKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGRE 213
L+ GR+
Sbjct: 152 -QLRFGGRD 159
>gi|225433837|ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera]
gi|297743756|emb|CBI36639.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP P DP+ T+F+ +N+ T+E L + +G +K + +V + VTG
Sbjct: 40 LCSSAGLYDPFGDPKVIGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTG 99
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
+GYAF+EYE ER+M AY+ A ID ++VD R + + GW+PRRLGGG+GG +
Sbjct: 100 ASQGYAFVEYETEREMRRAYEDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKE 159
Query: 201 GGPDVNLKHSGRE 213
G L+ GRE
Sbjct: 160 SG---QLRFGGRE 169
>gi|327276115|ref|XP_003222816.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Anolis carolinensis]
Length = 260
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN + DP TLF+AR+N T+E KL+ F YG I+KI +V + VTG +G
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVARLNLQTTEDKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAF+EY+ ER + A++ A+ ID R + VD E RT+KGW+PRRLGGG GG + G
Sbjct: 94 YAFVEYKEERALIKAHRDANRLVIDQREIFVDFELERTLKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGRE 213
L+ GR+
Sbjct: 152 -QLRFGGRD 159
>gi|392577664|gb|EIW70793.1| hypothetical protein TREMEDRAFT_73567 [Tremella mesenterica DSM
1558]
Length = 335
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 121/242 (50%), Gaps = 55/242 (22%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAF----------------- 43
MT LPPNLL LFAPR P P+L P+ + ++ +G+ +
Sbjct: 1 MTSLLPPNLLKLFAPRPPPPFLKPLSRDESKRGPDRLAGVGSLVQRIREQAEDEEVKKGM 60
Query: 44 ------------LNEFEDPKDTPPPTRVETR-----------------------EERLER 68
+N ED + ++V+ + +E ++
Sbjct: 61 QPVEEGAAEDVEMNGGEDEQIKEDSSKVDGKGKGKVRKEIKRKKDKISEMGVVGQEAIKM 120
Query: 69 RRRERAE-QVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGP 127
RR RA+ + YK + E A + P A DP+KTLFI+R++ +E LRREFE+YG
Sbjct: 121 RRELRAKRKEQYKKDSE-ANYRPQDDTKAVGDPYKTLFISRLSSKATEQDLRREFEMYGA 179
Query: 128 IKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWL 187
I+ I +V N+ GK YAFI YE ERDM +AYK A+G I +++LVDVER RTVKGW
Sbjct: 180 IEHIRIVRNR-KGKSNSYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWK 238
Query: 188 PR 189
PR
Sbjct: 239 PR 240
>gi|395529739|ref|XP_003766966.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Sarcophilus harrisii]
Length = 283
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 144/261 (55%), Gaps = 41/261 (15%)
Query: 94 PN--ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
PN + DP+ TLF+ R+N T+E KL+ F YG I+K+ +V + VTG + YAFIEY
Sbjct: 41 PNKGVSGDPYLTLFVGRLNLQTTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYR 100
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
E+ + AY+ A+G ID + VD E R +KGW+PRRLGGG GG + G L+ G
Sbjct: 101 EEQSLLKAYRDANGLVIDQHEIFVDYELERVLKGWIPRRLGGGFGGKKESG---QLRFGG 157
Query: 212 RE----------------DNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRS 255
R+ E +RER R+R RAR +DR RE+ R
Sbjct: 158 RDRPFRKPINLPVFKSDFYGEGQRERREWCRDRSW---DWRARDQDHDRGREK-----RW 209
Query: 256 RERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRR-RERENSED 314
+ER+ ++ ++ ER R+ D E R ++R DR+R +DR+R+ RER++ E
Sbjct: 210 QERESSSAWDKN---------ERQRERDFREERSRGRERKDRER-KDRERKDRERKDRER 259
Query: 315 RNERKRDR-KERRKERERNNE 334
+++ +RDR KER +++R ++
Sbjct: 260 KDQERRDRSKERDSKKQRKDD 280
>gi|350536563|ref|NP_001232485.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128442|gb|ACH44940.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128443|gb|ACH44941.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128444|gb|ACH44942.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128445|gb|ACH44943.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
Length = 265
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
Query: 94 PNATM--DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
PN + DP TLF+AR+N T+E KL+ F YG I+KI +V + VTG +GYAFIEY+
Sbjct: 41 PNKGVMGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYK 100
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
ER + A++ A+ ID + VD E RT+KGW+PRRLGGG GG + G L+ G
Sbjct: 101 EERALLKAHRDANRLVIDQHEIFVDFELERTLKGWIPRRLGGGFGGKKESG---QLRFGG 157
Query: 212 RE 213
R+
Sbjct: 158 RD 159
>gi|218202449|gb|EEC84876.1| hypothetical protein OsI_32022 [Oryza sativa Indica Group]
Length = 385
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 14/144 (9%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR-----------EFEVYGPIK 129
L L+DP P AT DP+ T+F+ R++ T + LR+ E YG +K
Sbjct: 43 LCSTAGLYDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKFLFLVVYVREQEMSRYGRVK 102
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+ +V + VTG RGYAF+EYE +R+M AY+ A IDGR VLVD R + + GW+PR
Sbjct: 103 SMRLVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGREVLVDYYRQQLMPGWIPR 162
Query: 190 RLGGGLGGTRRGGPDVNLKHSGRE 213
R GGGLGG + G L+ GRE
Sbjct: 163 RSGGGLGGKKESG---QLRFGGRE 183
>gi|30693345|ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|1354466|gb|AAD12776.1| U1 snRNP 70K truncated protein [Arabidopsis thaliana]
gi|1354468|gb|AAD12774.1| U1 snRNP 70K truncated protein [Arabidopsis thaliana]
gi|332645172|gb|AEE78693.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 204
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 7/139 (5%)
Query: 8 NLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVETREE 64
NLL LF PR P+ Y PP EK +K Y+G+A F++ F +P D PP VE +
Sbjct: 45 NLLKLFEPRPPLEYKPPPEK----RKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQ 100
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
+ ER + R E+ K +++ +DPN+ PNAT DP+KTLF++R+NY++SESK++REFE
Sbjct: 101 KRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFES 160
Query: 125 YGPIKKIVMVHNKVTGKPR 143
YGPIK++ + + G R
Sbjct: 161 YGPIKRVGYSEHSLAGSVR 179
>gi|346327421|gb|EGX97017.1| U1 small nuclear ribonucleoprotein [Cordyceps militaris CM01]
Length = 462
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 111/242 (45%), Gaps = 54/242 (22%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++ P + P ++KT G+AAFL + + K+ E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVEPADHAPEKRKTAHVDGLAAFLPDLKAYKENDKSVPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++ E+ V + PN P D FKTL +AR++Y+ E L R
Sbjct: 61 SWLEARDRKKLEKKAAVEELSTNAPKYYKPNEDPLIRGDAFKTLIVARLSYEADERDLER 120
Query: 121 EFEVYGPIKK---IVMVHNKVTG----KP-RGYAFIEYEHERDM---------------- 156
EF +GPI++ +V H G KP RGYAF+ +E E+DM
Sbjct: 121 EFGRFGPIERTRIVVDTHAAEKGNKKKKPHRGYAFVVFEREKDMRELWPSSLPSLPDVRN 180
Query: 157 ------------------------------HSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
+A DG +I RR+ VDVER RTVKGW
Sbjct: 181 ETFTALKLACLCNHLVSLPLSNTLDQVLYIAAALDACDGIRIKDRRIKVDVERGRTVKGW 240
Query: 187 LP 188
P
Sbjct: 241 KP 242
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%)
Query: 87 LWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
L DP+ P +T+F+ R+++ T+E LR FE +GPI+ + +V + VTGK +GYA
Sbjct: 36 LHDPSQDPQIRGSARRTVFVGRLDFVTNEETLRTTFERFGPIRHLRLVRDIVTGKSKGYA 95
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
F+EYEHE D H+AY+ GK ID RVLV++ER RT+ GW+PRR
Sbjct: 96 FVEYEHESDAHAAYRDMHGKDIDQARVLVEMERERTMAGWVPRR 139
>gi|50756329|ref|XP_415114.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Gallus gallus]
Length = 263
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T+E KL+ F YG I+KI +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY+ ER + A++ A+ ID V VD E RT+KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEVFVDFELERTLKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGREDNERERERYRLERERELAGGPPRARSGSND-----RERERERRRSRSR--- 256
L+ GR+ R+ + G R+ S + R R+RE RSR +
Sbjct: 152 -QLRFGGRDRPFRKPINLPNVKNDFYGEGSAEKRNWSREGTRDWRTRDREHERSREKRGP 210
Query: 257 ERKRRTSRSRS-RDRRRRRSR 276
ER+R S RD + RSR
Sbjct: 211 ERERSWGWGDSERDSKEERSR 231
>gi|395513787|ref|XP_003761104.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Sarcophilus harrisii]
Length = 263
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN + DP TLF+ R+N T+E KL+ F YG I+K+ +V + VTG +
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVGRLNLQTTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKR 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY ER + AY+ A+G ID + VD E R +KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYREERSLLKAYRDANGLVIDQHEIFVDYELERILKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGRE 213
L+ GR+
Sbjct: 152 -QLRFGGRD 159
>gi|449542311|gb|EMD33290.1| hypothetical protein CERSUDRAFT_117917 [Ceriporiopsis subvermispora
B]
Length = 378
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 29/210 (13%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVET 61
T LPPNLL LFAPR +PY P+++ + G+A L + E+ K +
Sbjct: 4 THLLPPNLLKLFAPRPALPYTRPLDRDIDRVRPKKVDGVAHILAQLEEDK-------TQG 56
Query: 62 REERLERRRRERAEQVAYKLEQEI---------------------ALWDPNSFPNATMDP 100
+ E E+ + L +E+ + P P DP
Sbjct: 57 MINAGQGEVMEEGEEPTFTLAEEVKRQLRREERKKKKEEEFKLAKENYKPQENPEVVGDP 116
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+KTLF+A + +E+ +RREFE +G ++++ +V +K G R YAF+ +E ERDM +A+
Sbjct: 117 YKTLFVAHLPKHATENDVRREFERFGSLERVRIVRDK-RGNSRKYAFVVFERERDMKAAF 175
Query: 161 KHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
K +D + G RVLVDVER RTV+GW PRR
Sbjct: 176 KSSDDIAVMGARVLVDVERGRTVRGWKPRR 205
>gi|218847772|ref|NP_001136383.1| small nuclear ribonucleoprotein 35kDa (U11/U12) [Xenopus (Silurana)
tropicalis]
gi|195539787|gb|AAI67878.1| Unknown (protein for MGC:135224) [Xenopus (Silurana) tropicalis]
Length = 264
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L +A + PN DP TL++AR++ T+E KL+ F YG IK+I +V + +TG
Sbjct: 32 LRAILARYVPNK--GVIGDPHLTLYVARLSQQTTEEKLKEVFSRYGDIKRIRLVRDFITG 89
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
+GYAFIEY+ E + A++ A+ ID R + VD E R +KGW+PRRLGGG GG +
Sbjct: 90 FSKGYAFIEYKQENAIMKAHRDANKLVIDQREIFVDFELERNLKGWVPRRLGGGFGGKKE 149
Query: 201 GGPDVNLKHSGRE 213
G L+ GR+
Sbjct: 150 SG---QLRFGGRD 159
>gi|320582206|gb|EFW96424.1| hypothetical protein HPODL_2081 [Ogataea parapolymorpha DL-1]
Length = 256
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 16/192 (8%)
Query: 7 PNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLN-------EFEDPKDTPPPTRV 59
P ++ LF P+ P+ YLPP + +++T GIA FL+ E++D K+
Sbjct: 8 PLIVDLFTPKVPLQYLPPADVPIEKRRTPKVDGIAQFLSSLKEHVEEYKDYKN-----EF 62
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
+RE + + + ++ + L++ + W+P + N DP+KT+F+ R++Y +E +LR
Sbjct: 63 VSREAKAKLKSQQNKD----ALQRALLKWNPETDTNIAGDPYKTVFVGRLDYTVNEIELR 118
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
+F +G I +I +V + TGK RGYAFI Y+ E D A++ + I R V+VD+ER
Sbjct: 119 EKFAQFGEIDQIRVVRDTNTGKSRGYAFILYKSESDAKLAFQKGNRMVIKDRAVIVDIER 178
Query: 180 SRTVKGWLPRRL 191
R VK W PRRL
Sbjct: 179 GRVVKNWKPRRL 190
>gi|149605642|ref|XP_001519834.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ornithorhynchus anatinus]
Length = 275
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+ R+N T+E KL+ F YG I+K+ +V + VTG +G
Sbjct: 36 LARYIPNK--GVTGDPHLTLFVGRLNLQTTEEKLKETFSRYGDIRKLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY+ ER + AY+ A+G ID + VD E RT+KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYKEERSLLKAYRDANGLVIDQHEIFVDYELERTLKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERERERR------RSRSRER 258
L+ GR+ R+ + + G R R DR R RSR R+
Sbjct: 152 -QLRFGGRDRPFRKPINLPALKN-DFYGEGQRERGDRGDRGERSRSRERTWDWRSRERDH 209
Query: 259 KR 260
+R
Sbjct: 210 ER 211
>gi|154305179|ref|XP_001552992.1| hypothetical protein BC1G_08884 [Botryotinia fuckeliana B05.10]
Length = 208
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 8/170 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P ++KT SG+AAFL ++ K+T E
Sbjct: 1 MTDKLPPNLLALFAPRPPLRWVPPSDFAPEDRKTANISGLAAFLPALQEYKETDDYQPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ +R +R + E+ +++ L+ P+ PN D FKTL ++R++YD +E L R
Sbjct: 61 SWLQRKDRVKLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATEKDLER 120
Query: 121 EFEVYGPIKKIVMVHN--------KVTGKPRGYAFIEYEHERDMHSAYKH 162
EF +GPI++I +V + K K RGYAF+ +E E+DM +H
Sbjct: 121 EFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMRGKAEH 170
>gi|66910367|gb|AAH96975.1| Mdm2 protein [Danio rerio]
Length = 164
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEK-KTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQFLPPNLLALFAPRDP+P+LP + KLPHEK Y GIA F+ FEDP+D PPPTR
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA 60
Query: 60 ETREERLERR 69
ETREERLER+
Sbjct: 61 ETREERLERK 70
>gi|301112318|ref|XP_002905238.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
gi|262095568|gb|EEY53620.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
Length = 204
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%)
Query: 86 ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGY 145
A +D P DP+ TLF+AR+++ T+ES + + F YGPI+++ +V +K T + +GY
Sbjct: 70 ARFDATKDPQIHGDPYATLFVARLSFSTAESTILQFFSNYGPIRRLRLVRDKKTDQSKGY 129
Query: 146 AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
AF+E+EHERD AY+HA + IDG +LVD ERSR +KGW PR
Sbjct: 130 AFVEFEHERDFGRAYRHAHRRVIDGATLLVDFERSRVMKGWKPR 173
>gi|390595574|gb|EIN04979.1| hypothetical protein PUNSTDRAFT_55288 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 170
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 16/168 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL-----------NEFEDP 50
T LPPNLL LF PR P+PY PV++ ++ G+AA L NE +D
Sbjct: 4 THLLPPNLLKLFQPRPPLPYARPVDRDIDRVRSKHVDGVAALLSRLQEESLNAQNEGKDL 63
Query: 51 KDTPPPTRVETREER--LERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIAR 108
++ PT E + + R +++A+ +K +E + P P A DP+KTLFIAR
Sbjct: 64 EEGEEPTFTHAEEVKRQILREEKKKAKTDEFKAAKES--YKPQEDPEAVGDPYKTLFIAR 121
Query: 109 VNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
++ +ES LRREFE YG I+++ +V +K G+ RGYAFI YE ERDM
Sbjct: 122 LHKSATESDLRREFESYGTIERVRIVRDK-NGRSRGYAFIVYERERDM 168
>gi|126324312|ref|XP_001375255.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Monodelphis domestica]
Length = 261
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 129/251 (51%), Gaps = 29/251 (11%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN + DP TLF+ R+N T+E KL+ F YG I+K+ +V + VTG +
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVGRLNLQTTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKR 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
YAFIEY+ ER + AY+ A+G ID + VD E R +KGW+PRRLGGG GG + G
Sbjct: 94 YAFIEYKEERSLLKAYRDANGLVIDQHEIFVDYELERILKGWIPRRLGGGFGGKKESG-- 151
Query: 205 VNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERERER-RRSRSRERKRRTS 263
L+ GR+ R+ P +D E +R RR SR+R
Sbjct: 152 -QLRFGGRDRPFRK---------------PINLPVFKSDFYGEGQRERREWSRDRTW-DW 194
Query: 264 RSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERENSEDRNERKRDRK 323
R+R DR R + R+ E R D ++R+R+RD + R R ER+ K
Sbjct: 195 RARDHDRGREKRRQ-------ERETTRSWDENERERERDFRDERNRGRERKDRERRDRSK 247
Query: 324 ERRKERERNNE 334
ER +++R+++
Sbjct: 248 ERDSKKQRDDD 258
>gi|91086635|ref|XP_966565.1| PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum]
gi|270009757|gb|EFA06205.1| hypothetical protein TcasGA2_TC009054 [Tribolium castaneum]
Length = 194
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P T+F++R++ T++ ++ F YGP+++ +V + VTG P+GYAFIEYE+E D A
Sbjct: 54 PECTIFVSRLSLKTTKDTIKDIFSKYGPLRRFRLVKDIVTGMPKGYAFIEYENELDAEEA 113
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
Y A+ IDG + VD E R +KGW PRRLGGG GG + G L+ GR+
Sbjct: 114 YCKANKMNIDGNIIFVDFECERLLKGWRPRRLGGGFGGKKESG---QLRFGGRD 164
>gi|398407635|ref|XP_003855283.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
gi|339475167|gb|EGP90259.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
Length = 603
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 116/200 (58%), Gaps = 13/200 (6%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFL----NEFEDPKDTPPP 56
MT LPPNLLALF PR P+ YLPP + P +++T G++AFL + E K+ P
Sbjct: 1 MTDRLPPNLLALFQPRPPLRYLPPHDYAPEDRRTRAIDGVSAFLPALAEKVESSKNDPIS 60
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIA-LWDPNSFPNATMDPFKTLFIARVNYDTSE 115
E+ ER +R R++A + A+ + + L+ P N D F+T+FI R+ Y +
Sbjct: 61 ---ESWLERRDRLTRDKAAKQAWVTGEGVKELYKPTEDENIRGDAFRTIFIGRLPYTCTT 117
Query: 116 SKLRREFEVYGPIKKIVMVHNKV-----TGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 170
L EF +GPI+++ +V ++ G RGYAF+ +E ERDM +AYK ++ I
Sbjct: 118 KDLEHEFGRFGPIERVRIVTDRSEKPSKKGTSRGYAFVLFESERDMKAAYKESERLLIRN 177
Query: 171 RRVLVDVERSRTVKGWLPRR 190
R VLVDVER RTV GW PRR
Sbjct: 178 RPVLVDVERGRTVTGWRPRR 197
>gi|224094751|ref|XP_002310221.1| predicted protein [Populus trichocarpa]
gi|222853124|gb|EEE90671.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 8 NLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVETREE 64
NLL LF PR P+ + PP EK +K Y G+A F++ F +P D PP ET E
Sbjct: 45 NLLKLFEPRPPLEFKPPPEK----RKCPPYLGMAQFVSHFAEPGDPEYAPPIKEAETPAE 100
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R R R E+ A K +E+ +DP + PN + DP+KTLF+AR++Y+T+ES+++REFE
Sbjct: 101 RKARIHAARLEKGAEKAAEELQKYDPTNDPNVSGDPYKTLFVARLSYETTESRIKREFES 160
Query: 125 YGPIKKIVMVHNKVTG 140
YGPIK++ + G
Sbjct: 161 YGPIKRVGIFEYTQAG 176
>gi|393221008|gb|EJD06493.1| hypothetical protein FOMMEDRAFT_77333 [Fomitiporia mediterranea
MF3/22]
Length = 184
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK---------- 51
T LPPNLL LFAPR P+PY+ PV K P + G+AA L ++
Sbjct: 4 THLLPPNLLKLFAPRPPLPYIRPVGKDPDRVRAKNVDGVAALLARLKEESTQGLIDAGTQ 63
Query: 52 ---------DTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK 102
+ P T E + ++ + R++A++ +K +E ++ P P A DP+K
Sbjct: 64 EVPDGMEEGEEPVFTHTEETQRQIRKEERKKAKEDHFKNAKE--MYKPAEDPEAVGDPYK 121
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
TLF+AR+ E LRR FE YG I+++ +V +K G+ RGYAFI YE ERDM
Sbjct: 122 TLFVARLKKQAKEIDLRRVFEGYGTIERVRIVRDK-KGRSRGYAFIVYERERDM 174
>gi|168015720|ref|XP_001760398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688412|gb|EDQ74789.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 81/127 (63%), Gaps = 7/127 (5%)
Query: 8 NLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVETREE 64
NLL LF PR P+ Y PP EK +K Y GI F+ F +P D PP T+ ET +
Sbjct: 45 NLLKLFEPRPPLEYKPPPEK----RKCPPYLGIGQFVQHFAEPGDPEYAPPVTKGETPTQ 100
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R R + R E+ A K E++ +DP + P+ DP+KTLF+AR++Y+T+E+K+RREFE
Sbjct: 101 RRARIHQLRLEEGAKKAVDELSKYDPTNDPDIEGDPYKTLFVARISYETTENKIRREFES 160
Query: 125 YGPIKKI 131
YGPIK++
Sbjct: 161 YGPIKRV 167
>gi|168061033|ref|XP_001782496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666049|gb|EDQ52715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 181
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 8 NLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVETREE 64
NLL LF PR P+ + PP EK +K Y GI F+ F +P D PP T+ ET +
Sbjct: 45 NLLKLFEPRPPLEFKPPPEK----RKCPPYQGIGQFVQHFAEPGDPEYAPPVTKGETPTQ 100
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R R + R E+ A K E++ +DP + P+ DP+KTLF+AR++Y+T+E K+RREFE
Sbjct: 101 RRARIHQLRLEEGAKKALDELSKYDPTNDPDIEGDPYKTLFVARISYETTEHKIRREFES 160
Query: 125 YGPIKKI 131
YGPIK++
Sbjct: 161 YGPIKRV 167
>gi|297824313|ref|XP_002880039.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
gi|297325878|gb|EFH56298.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 133/283 (46%), Gaps = 49/283 (17%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L DP+ A DP+ TLF+ R+++ T+E +R YG IK + +V + VTG
Sbjct: 43 LCYNAGLCDPSGDSKAIGDPYCTLFVGRLSHHTTEDTIREVMSKYGWIKNLRLVRHIVTG 102
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGL----- 195
RGYAF+EYE E++M AY+ A IDGR V+VD R + + GW+PRRLGGGL
Sbjct: 103 ASRGYAFVEYETEKEMLCAYEDAHHSLIDGREVIVDYNRQQLMPGWIPRRLGGGLGGRKE 162
Query: 196 -GGTRRGG------------PDVNLKHSGREDNERERERYRLERERELAGGPPRARSGSN 242
G R GG P V+LK G + R R + PPR + +
Sbjct: 163 SGQLRFGGRDRPFRAPLRPIPHVDLKKLGIQLPPEGRYMSRTQ-----IPSPPRRKGNVS 217
Query: 243 DRERE--------------RERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVE 288
DRE E +ER RS R +S + S RRR + R+
Sbjct: 218 DREEEYYREKRSVERDEEFKERSSLRSYHSHRTSSHTHSSHRRRSKDRDE---------R 268
Query: 289 FRPKDRSDRDRDRDRKRRRERENSEDRNERKRDRKERRKERER 331
R + RSDR ++R R E +++ E ++ +R E +R
Sbjct: 269 SRTESRSDR---KERSRGMEDRYGDNKGEVSGSKRSKRLEEDR 308
>gi|300175328|emb|CBK20639.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
TLFI ++Y T E++LR E YGPI+ +V+V + GK RGYAF+EY + DM +AY
Sbjct: 1 MNTLFIGNLSYLTQENRLRELCEKYGPIESLVIVKDH-DGKSRGYAFVEYTYSNDMTTAY 59
Query: 161 KHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTR 199
K +D R+++VDVER RTV+ WLP RLGGGLG TR
Sbjct: 60 KRLRRHPLDERKLIVDVERGRTVRKWLPARLGGGLGKTR 98
>gi|384497600|gb|EIE88091.1| hypothetical protein RO3G_12802 [Rhizopus delemar RA 99-880]
Length = 178
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
Query: 87 LWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
+ DP N T DPF TLF+ ++ + +ES L++EFE+ +++ N GK R YA
Sbjct: 1 MHDPEKDANITGDPFNTLFVTHLSPELTESDLQKEFEI-----RLIRDEN---GKSRCYA 52
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
FIE+E E+DM +AYK ADG KI GRR+LVDVER+RTVKGW PR
Sbjct: 53 FIEFEREKDMRAAYKDADGLKILGRRILVDVERARTVKGWKPR 95
>gi|430811873|emb|CCJ30667.1| unnamed protein product [Pneumocystis jirovecii]
Length = 177
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDP-KDTPPPTRV 59
MT LPP LLALF R P+ YLPP + P ++T SGIA ++ D KD P
Sbjct: 1 MTDKLPPPLLALFQARPPLRYLPPCDIAPSLRRTPRISGIARYVPLLADYDKDYQPTESW 60
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
+ ER +++ E+V + + +A + P PN DP+KTLF++R++Y +E L
Sbjct: 61 LEKRERRREEKKKIQEEV---IRKGLAAYRPRQDPNIKGDPYKTLFVSRLSYKVTEQDLM 117
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
REF YG I++I +V N KP GYAFI YE ERDM YK
Sbjct: 118 REFGRYGAIERIRLVTNVKNNKPMGYAFIVYERERDMKGLYKQ 160
>gi|2289001|gb|AAB64330.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
Length = 292
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 41/258 (15%)
Query: 87 LWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
L+DP+ A DP+ TLF+ R+++ T+E LR YG IK + +V + VTG RGY
Sbjct: 43 LYDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYG 102
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGL------GGTRR 200
F+EYE E++M AY+ A IDGR ++VD R + + GW+PRRLGGGL G R
Sbjct: 103 FVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRF 162
Query: 201 GGPD----VNLKHSGREDNERE--RERYRLERERELAGGPPRARSGSNDRERERERRRSR 254
GG D L+ D E E RE+ +ERE E +ER R
Sbjct: 163 GGRDRPFRAPLRKGSVSDREEEYYREKSSVEREEEF-----------------KERSSLR 205
Query: 255 SRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERENSED 314
S R ++ + S RRR + RE R + RSDR ++R R E ++
Sbjct: 206 SYHSHRSSAHTHSSHRRRSKDREECS---------REESRSDR---KERARGMEDRYGDN 253
Query: 315 RNERKRDRKERRKERERN 332
+ E ++ +R E +R+
Sbjct: 254 KGEVSGSKRSKRSEEDRS 271
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 21/200 (10%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGY-SGIA--------AFLNEFEDPKD 52
T P ++ LF PR P+ Y PV+ P +++T + +G++ +++N+F D
Sbjct: 5 TSKFPSDVSRLFKPRPPLEYKRPVDYPPEKRQTCPHITGVSQLLGEQLSSYVNQFPQGSD 64
Query: 53 TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNY 111
++ EE + E A KL QE W+P+ PN DPFKT+F+ R+ Y
Sbjct: 65 N---KYLQKYEEASHAKDNEYA-----KLNQETRGWEPHKDPNIKETDPFKTIFVGRLPY 116
Query: 112 DTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKI 168
DT+E +L+REF +G I++I +V +KVT K +GYAF+ + + + A K G +I
Sbjct: 117 DTTEMELQREFSKFGDIERIRVVRDKVTNKSKGYAFVLFTNPQSSRMACKEIGIHRGLEI 176
Query: 169 DGRRVLVDVERSRTVKGWLP 188
GR +VD+ER RT+K + P
Sbjct: 177 KGRIAIVDIERGRTIKYFKP 196
>gi|73995146|ref|XP_534648.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Canis lupus familiaris]
Length = 246
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGLSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|325180074|emb|CCA14475.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein putative
[Albugo laibachii Nc14]
Length = 224
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%)
Query: 88 WDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
+DP N D KTLFI R++ +TS+ + + F YGPI + +V + VT +GYAF
Sbjct: 86 FDPKRDSNIKGDATKTLFIGRLHSETSQDAIYQLFSSYGPIAHVRLVRDIVTKASKGYAF 145
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGG 202
+EY R A + + + +DGR++LVD ERSR + GW PRR+GGGLGG + G
Sbjct: 146 VEYRDRRHFERALEDGNDRILDGRKLLVDYERSRLMPGWKPRRMGGGLGGKKESG 200
>gi|358339950|dbj|GAA47912.1| U1 small nuclear ribonucleoprotein 70kDa [Clonorchis sinensis]
Length = 166
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
MV N++TGKPRGYAF+E+EHER+MH+A K +GKKIDG R+L D+ER RT W PRRLG
Sbjct: 1 MVKNRLTGKPRGYAFVEFEHEREMHAAVKGLNGKKIDGMRILTDIERGRTRPDWRPRRLG 60
Query: 193 GGLGGTRRGGPDVNLKHSGREDNERE 218
GLG R+ GP K S + +N RE
Sbjct: 61 KGLGKNRQ-GPSEKPKVSSKHENGRE 85
>gi|431912140|gb|ELK14278.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Pteropus
alecto]
Length = 246
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYAPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|410976458|ref|XP_003994637.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Felis catus]
Length = 246
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|366993981|ref|XP_003676755.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
gi|342302622|emb|CCC70398.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
Length = 321
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFL-NEFED-PKDTPPPTRVET 61
LP ++ LF P P+ Y + P +++T+ +G++ FL N + D P ++ +
Sbjct: 8 LPSDISHLFKPGPPLRYFKSTDYPPSKRQTNPNITGVSQFLSNNLQSYLNDFPSDSQTKV 67
Query: 62 REER-LERRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLR 119
E++ E +ER K+ + I WDP++ PN DP++T+FI R+ YDT+E +L+
Sbjct: 68 DEDKQFEEVEKERIS----KMNESIRNWDPHNDPNIKDTDPYRTIFIGRLPYDTTELELQ 123
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVD 176
+ F +G I+KI +V +K+T K +GYAFI + A+K G I GR +VD
Sbjct: 124 KLFVKFGEIEKIRIVRDKLTNKSKGYAFIVFLDPMSSKMAFKEIGVHRGIDIKGRTCIVD 183
Query: 177 VERSRTVKGWLP 188
+ERSRT+K + P
Sbjct: 184 IERSRTMKYFKP 195
>gi|149720723|ref|XP_001498122.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Equus caballus]
Length = 246
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYAPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|335301144|ref|XP_003359137.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like isoform 1 [Sus scrofa]
Length = 246
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|301754651|ref|XP_002913143.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ailuropoda melanoleuca]
Length = 246
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|281343806|gb|EFB19390.1| hypothetical protein PANDA_000935 [Ailuropoda melanoleuca]
Length = 247
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 37 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 94
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 95 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 139
>gi|440898320|gb|ELR49845.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, partial
[Bos grunniens mutus]
Length = 246
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 37 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 94
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 95 YAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 139
>gi|432094892|gb|ELK26300.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Myotis
davidii]
Length = 246
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LAQYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLLRAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|426247194|ref|XP_004017371.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Ovis aries]
Length = 245
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|344297375|ref|XP_003420374.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Loxodonta africana]
Length = 259
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER
Sbjct: 44 GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+ +AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 104 SLLNAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|115495605|ref|NP_001069024.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Bos taurus]
gi|122144781|sp|Q1LZH0.1|U1SBP_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|94534832|gb|AAI16003.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
gi|296478494|tpg|DAA20609.1| TPA: small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
Length = 245
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|392876104|gb|AFM86884.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
+ DP TLF+AR+N T+E KLR F +G ++++ +V + VTG + Y FIEY ER
Sbjct: 45 GVSGDPHLTLFVARLNPQTTEQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREER 104
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
+ A++ A+ +D + VD E R +KGW+PRR GGGLGG + G L+ GR+
Sbjct: 105 SLVKAHRDANKLLVDQHELFVDFELERVLKGWMPRRFGGGLGGKKESG---QLRFGGRD 160
>gi|355721016|gb|AES07125.1| small nuclear ribonucleoprotein 35kDa [Mustela putorius furo]
Length = 245
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|168024474|ref|XP_001764761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684055|gb|EDQ70460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP PNA DP+ +LF+ R++ T E L + +G IK + +V + VTG
Sbjct: 39 LASTTGLYDPLGDPNAKGDPYCSLFVGRLSTQTDEKSLHKAMSKFGRIKSLRLVRHIVTG 98
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
GYAF+E+E E++M+ AY+ A K+DG +LVD R + + GW+PRR
Sbjct: 99 ASCGYAFVEFETEKEMYMAYEGAHLSKLDGASILVDYNRQQLMPGWIPRR 148
>gi|392594814|gb|EIW84138.1| hypothetical protein CONPUDRAFT_51126 [Coniophora puteana
RWD-64-598 SS2]
Length = 177
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 19/177 (10%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDT-------- 53
T LPPNLL LFAPR P+PY PV++ P + SG+A L++ ++ D
Sbjct: 4 THLLPPNLLKLFAPRPPLPYKRPVDRDPGRIRPKHVSGVAEILSKLKEASDNTLINGDGG 63
Query: 54 --------PPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLF 105
P T E + ++ R R + +K+ +E + P A DP+KTLF
Sbjct: 64 EGMEEGEEPTFTLAEETKRQMRREERRKRRTEDFKVAKEN--YKPADDAEAIGDPYKTLF 121
Query: 106 IARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
I+R++ +ES LRREFE YG I+++ +V NK G+ RGYAFI YE ERDM + H
Sbjct: 122 ISRLHKAATESDLRREFESYGTIERVRIVRNK-NGRSRGYAFIVYERERDMKGTHTH 177
>gi|389749680|gb|EIM90851.1| hypothetical protein STEHIDRAFT_118087 [Stereum hirsutum FP-91666
SS1]
Length = 180
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 93/175 (53%), Gaps = 25/175 (14%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDT-------- 53
T LPPNLL LFAPR P+PY P++K SG+ A L +
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDKDIDRVTKKDVSGVGAILASLRENATAGLINGNGE 63
Query: 54 ----------PPPTRVET--REERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPF 101
P T E R+ R E R+++RAE +K+ +E + P A DP+
Sbjct: 64 SVEGMEEGEEPVFTHAEQTKRQLRREERKKKRAED--FKVAKES--YKPAEDAEAVGDPY 119
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
KTLFIAR++ +E+ +RREFE YG I+++ +V +K G+ RGYAF+ YE ERDM
Sbjct: 120 KTLFIARLHKTATETDIRREFETYGTIERVRIVKDK-KGRSRGYAFVVYERERDM 173
>gi|387914692|gb|AFK10955.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
+ DP TLF+AR+N T+E KLR F +G ++++ +V + VTG + Y FIEY ER
Sbjct: 45 GVSGDPHLTLFVARLNPQTTEQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREER 104
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
+ A++ A+ +D + VD E R +KGW+PRR GGGLGG + G L+ GR+
Sbjct: 105 SLVKAHRDANKLLVDQHELFVDFELERVLKGWMPRRFGGGLGGKKESG---QLRLGGRD 160
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 39/279 (13%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP+ A DP+ TLF+ R+++ T+E LR YG IK + +V + VTG
Sbjct: 43 LCYNAGLYDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTG 102
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGL----- 195
RGY F+EYE E++M AY+ A IDGR ++VD R + + GW+PRRLGGGL
Sbjct: 103 ASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKE 162
Query: 196 -GGTRRGGPDVNLKHSGREDNERERERYRLE-------RERELAGGPPRARSGSNDRERE 247
G R GG D + R + ++ ++ R PPR + +DRE E
Sbjct: 163 SGQLRFGGRDRPFRAPLRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSDREEE 222
Query: 248 --------------RERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKD 293
+ER RS R ++ + S RRR + RE R +
Sbjct: 223 YYREKSSVEREEEFKERSSLRSYHSHRSSAHTHSSHRRRSKDREECS---------REES 273
Query: 294 RSDRDRDRDRKRRRERENSEDRNERKRDRKERRKERERN 332
RSDR ++R R E +++ E ++ +R E +R+
Sbjct: 274 RSDR---KERARGMEDRYGDNKGEVSGSKRSKRSEEDRS 309
>gi|395846781|ref|XP_003796072.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Otolemur garnettii]
Length = 246
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERSVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|45187810|ref|NP_984033.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|44982571|gb|AAS51857.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|374107246|gb|AEY96154.1| FADL063Wp [Ashbya gossypii FDAG1]
Length = 320
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 17/195 (8%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNE---FEDPKDTPPPTRVET 61
P + +LF PR P+ Y PV+ P E+KT + +++ L ++ P T
Sbjct: 8 FPDRVSSLFKPRPPLQYRKPVDYAPEERKTATITPVSSVLGTDALMRYMQEFP------T 61
Query: 62 REERLERRRRERAEQVAYK----LEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSES 116
E L +R E + + + LE+E+A W P + N DPF+T+F+ R++YD E
Sbjct: 62 GSENLLIQRYEELKTINSRKEQELEEELAKWAPENDTNIQGTDPFRTIFVGRLHYDVDEL 121
Query: 117 KLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRV 173
+L++ F +G I+++ +V +K+T KPRGYAF+ + AY+ G I GR
Sbjct: 122 ELQKHFIKFGEIERVRIVRDKITNKPRGYAFVLFRDPECSKKAYREIGVHRGLMIRGRSA 181
Query: 174 LVDVERSRTVKGWLP 188
+VD+ER RTVK + P
Sbjct: 182 IVDIERGRTVKFFRP 196
>gi|291414264|ref|XP_002723378.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)
[Oryctolagus cuniculus]
Length = 246
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAF+EY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFVEYKEERALLRAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|302798547|ref|XP_002981033.1| hypothetical protein SELMODRAFT_58751 [Selaginella moellendorffii]
gi|300151087|gb|EFJ17734.1| hypothetical protein SELMODRAFT_58751 [Selaginella moellendorffii]
Length = 156
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 8 NLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD---TPPPTRVETREE 64
NLL LF PR P+ Y PP EK + Y GI+ F+ F +P D +PP + ET +
Sbjct: 33 NLLKLFEPRPPLEYKPPPEK----RNLPPYHGISQFVQHFAEPGDPEYSPPIVKAETPSQ 88
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
R R R E+ A K +++ +DP + N DP+KTLF+AR++Y+T+E K++REFE
Sbjct: 89 RRARIHSVRLEKGAEKATEDLEKYDPQTDSNIEGDPYKTLFVARISYETTEHKIKREFEA 148
Query: 125 YGPIKKI 131
YGPIK++
Sbjct: 149 YGPIKRV 155
>gi|224133078|ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|222837365|gb|EEE75744.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP P A DP+ T+F+ R+++ T+E LR+ YG +K + +V + VTG
Sbjct: 40 LCSSAGLYDPFGDPKAIGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTG 99
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RGYAF+E+E ER+M AYK ID ++VD R + + GW+PRR
Sbjct: 100 ASRGYAFVEFETEREMRRAYKDGQHSYIDDSEIIVDYNRQQLMPGWIPRR 149
>gi|351698560|gb|EHB01479.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Heterocephalus glaber]
Length = 246
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 63/96 (65%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
T DP TLF+AR+N T E KLR F YG I+++ +V + VTG +GYAFIEY+ ER
Sbjct: 44 GVTGDPLLTLFVARLNLQTKEDKLREVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+ AY+ ADG +D V VD E RT++GW+PRR
Sbjct: 104 ALLKAYRDADGLVVDQHEVFVDYELERTLRGWIPRR 139
>gi|444724897|gb|ELW65483.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Tupaia
chinensis]
Length = 246
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYAPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERALIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|348554281|ref|XP_003462954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cavia porcellus]
Length = 246
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KLR F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLREVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
YAFIEY+ ER + A++ ADG ID V VD E RT++GW+PRR
Sbjct: 94 YAFIEYKEERALLKAHRDADGLLIDQHEVFVDFELERTLRGWIPRR 139
>gi|195156481|ref|XP_002019128.1| GL25592 [Drosophila persimilis]
gi|194115281|gb|EDW37324.1| GL25592 [Drosophila persimilis]
Length = 309
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRV 59
MTQ+LPPNLLALFA RDP+P++PPV+KLPHEKK+ GY G+A F+ +FEDP+DTP P V
Sbjct: 1 MTQYLPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAHFMTDFEDPEDTPLPKTV 59
>gi|293333112|ref|NP_001169404.1| hypothetical protein [Zea mays]
gi|224029143|gb|ACN33647.1| unknown [Zea mays]
gi|414886248|tpg|DAA62262.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea mays]
Length = 483
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 69/110 (62%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
+ + L+DP P A+ DP +T+F+ R++ T + LR+ YG +K + +V + VTG
Sbjct: 40 ICSQAGLYDPFGDPKASGDPHRTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTG 99
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RGYAF+EYE +R+MH AY+ A I+G V+VD R + + GW+PRR
Sbjct: 100 ASRGYAFVEYETDREMHRAYEDAHHSVIEGSEVIVDYYRQQLMPGWIPRR 149
>gi|397481850|ref|XP_003812150.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan paniscus]
Length = 307
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 97 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 154
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 155 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 199
>gi|114647660|ref|XP_509463.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 4 [Pan troglodytes]
Length = 307
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 97 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 154
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 155 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 199
>gi|302786704|ref|XP_002975123.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
gi|300157282|gb|EFJ23908.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
Length = 137
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK--DTPPPTRVETR 62
L PNLL LF P PV Y P+EK K+ Y+GIA F++ FE+ D +VET
Sbjct: 9 LTPNLLRLFDPPPPVEYKEPIEK----KELPPYTGIAQFVSCFENLSIDDQESQAKVETI 64
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREF 122
ER R R E+ KL +EI +DP S PNA DP+KTLFI +++Y+T+E +L+REF
Sbjct: 65 AERRARVNAARLEKGKEKLAEEIPKYDPRSDPNARGDPYKTLFIGKLSYETTEHRLQREF 124
Query: 123 EVYGPIKKI 131
E YGP+K++
Sbjct: 125 ERYGPVKRV 133
>gi|405950278|gb|EKC18275.1| Deleted in malignant brain tumors 1 protein [Crassostrea gigas]
Length = 2051
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 88 WDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
+ PN + DP T+F++R+N T E L +F +G I KI +V + +TG RGYAF
Sbjct: 25 YKPNK--DVAGDPNLTVFVSRLNPKTDEDTLESQFSYFGEIHKIRLVRDIITGHSRGYAF 82
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGG 194
+E++ R A + G +IDG VLVD E RT+ GW+PRRLGG
Sbjct: 83 VEFKEGRSAVRAERDGHGMEIDGYEVLVDFELERTLPGWVPRRLGGA 129
>gi|242045290|ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
gi|241923893|gb|EER97037.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
Length = 437
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
+ + L+DP P A+ DP+ T+F+ R++ T + LR+ YG +K + +V + VTG
Sbjct: 40 ICSQAGLYDPFGDPKASGDPYCTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTG 99
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RGYAF+EYE +R+M AY+ A IDG V+VD R + + GW+PRR
Sbjct: 100 ASRGYAFVEYETDREMRRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRR 149
>gi|395323376|gb|EJF55850.1| hypothetical protein DICSQDRAFT_72768 [Dichomitus squalens LYAD-421
SS1]
Length = 209
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPK---------- 51
T LPPNLL LFAPR P+PY P+++ + G+ + L + K
Sbjct: 4 THLLPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVDGVGSLLASLREAKTQGMMESGST 63
Query: 52 --------DTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKT 103
+ P E + + RR ER + A + ++ + P+ P A DP+KT
Sbjct: 64 GDAGDGMEEGEEPAFTYAEETKRQLRREERKRKKAEEFQKAKDSYKPSEDPEAIGDPYKT 123
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
LFI+R++ + +E+ LRREFE +G I+++ +V +K G+ RGYAFI +E ERDM Y
Sbjct: 124 LFISRLHKNATENDLRREFEGFGSIERVRIVRDK-NGRSRGYAFIVFERERDMKGNY 179
>gi|367017532|ref|XP_003683264.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
gi|359750928|emb|CCE94053.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
Length = 318
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 24/202 (11%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKK-----THGYSGI-----AAFLNEFEDP 50
+T+F P ++ LF PR P+ Y PV+ P EK+ G S I A +L++F
Sbjct: 5 ITKF-PADVSRLFKPRPPLAYKKPVD-YPLEKRQTCPHITGVSQILDKPLAGYLSDFPQG 62
Query: 51 KDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARV 109
++ E+ + + RE+ E LE +++ WDP + PN DP++T+F+ R+
Sbjct: 63 SQN---KYLQDYEKAADSKNREQRE-----LENKLSEWDPQNDPNMKDTDPYRTIFVGRL 114
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GK 166
YD SE +L+R+F +G I+K+ +V +K+ + +GYAFI + + SA K G
Sbjct: 115 PYDISEVELQRKFNEFGEIEKVRVVRDKINNQSKGYAFIVFTDPQSSKSACKEYGLHRGI 174
Query: 167 KIDGRRVLVDVERSRTVKGWLP 188
+I GR +VD+ER RTVK + P
Sbjct: 175 EIKGRTCIVDIERGRTVKYFKP 196
>gi|21624627|ref|NP_083808.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Mus
musculus]
gi|81916986|sp|Q9D384.1|U1SBP_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|12857850|dbj|BAB31127.1| unnamed protein product [Mus musculus]
gi|27695288|gb|AAH43031.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|34849818|gb|AAH58361.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|148687639|gb|EDL19586.1| RIKEN cDNA 6330548G22 [Mus musculus]
Length = 244
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER
Sbjct: 44 GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+ AY+ ADG ID + VD E RT++GW+PRR
Sbjct: 104 ALMKAYRDADGLVIDQHEIFVDYELERTLRGWIPRR 139
>gi|119618819|gb|EAW98413.1| U11/U12 snRNP 35K, isoform CRA_b [Homo sapiens]
Length = 278
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER +
Sbjct: 48 DPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIK 107
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 108 AYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|355564803|gb|EHH21303.1| hypothetical protein EGK_04324, partial [Macaca mulatta]
gi|355759389|gb|EHH61611.1| hypothetical protein EGM_19603, partial [Macaca fascicularis]
Length = 247
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 37 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 94
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 95 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 139
>gi|13027642|ref|NP_073208.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform a
[Homo sapiens]
gi|297693357|ref|XP_002823986.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pongo abelii]
gi|332254325|ref|XP_003276277.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Nomascus leucogenys]
gi|395745035|ref|XP_003778201.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pongo abelii]
gi|441630256|ref|XP_004089521.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|74754517|sp|Q16560.1|U1SBP_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein;
Short=U11/U12-35K; AltName: Full=Protein HM-1; AltName:
Full=U1 snRNP-binding protein homolog
gi|1174217|gb|AAA86654.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|1174219|gb|AAA86655.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|32450706|gb|AAH54034.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|48427632|tpg|DAA05495.1| TPA_exp: U11/U12 snRNP 35K [Homo sapiens]
gi|119618818|gb|EAW98412.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|119618820|gb|EAW98414.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|158261277|dbj|BAF82816.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|354496379|ref|XP_003510304.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cricetulus griseus]
gi|344258842|gb|EGW14946.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cricetulus
griseus]
Length = 246
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
YAFIEY+ ER + AY+ ADG ID + VD E RT++GW+PRR
Sbjct: 94 YAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRR 139
>gi|109099573|ref|XP_001089715.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Macaca mulatta]
Length = 246
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER +
Sbjct: 48 DPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIK 107
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 108 AYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|238882323|gb|EEQ45961.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 349
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR--- 58
T+ PPN+ LF P+ P PY+ P++ P ++ T S I++ NE + + P R
Sbjct: 5 TEKYPPNIQKLFQPKPPFPYISPIDYPPEKRSTKPISPISSIKNEIDKYLTSELPERESK 64
Query: 59 ---VETREERLERRRRERAEQVAYKL------EQEIALWD-PNSFPNA----TMDPFKTL 104
V + ++ + ++++ E +L E+++ W+ P F DPF+T+
Sbjct: 65 AQAVPKKISKIVKHKQKQHEANLKRLAKEKDHERQLEEWNNPTLFAKQEREFMKDPFRTV 124
Query: 105 FIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
FIAR++Y+ +E + R F YG I+ I ++ +K GK RGY F+ YE D +
Sbjct: 125 FIARLDYNLTELDISRAFARYGMIESIRIIRDK-QGKSRGYGFVVYERNTDAMNCVNDLS 183
Query: 165 --GKKIDGRRVLVDVERSRTVKGWLPR 189
G K+ R +LVD+ERSR +K W PR
Sbjct: 184 RTGLKLGNRPILVDIERSRVLKNWRPR 210
>gi|410047484|ref|XP_003952396.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan troglodytes]
Length = 246
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|402888045|ref|XP_003907387.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Papio anubis]
Length = 254
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER +
Sbjct: 48 DPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIK 107
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 108 AYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|426374578|ref|XP_004054147.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Gorilla gorilla gorilla]
Length = 246
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|332840730|ref|XP_001169924.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pan troglodytes]
Length = 251
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 99 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 143
>gi|426374582|ref|XP_004054149.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 3 [Gorilla gorilla gorilla]
Length = 251
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 94 PNATM--DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
PN + DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+
Sbjct: 41 PNKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 100
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 101 EERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|426374580|ref|XP_004054148.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Gorilla gorilla gorilla]
Length = 251
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 99 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 143
>gi|395745038|ref|XP_002823985.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Pongo abelii]
Length = 251
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|31077198|ref|NP_851030.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b
[Homo sapiens]
gi|441630253|ref|XP_004089520.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|52790429|gb|AAH09622.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|55249546|gb|AAH47678.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|62739916|gb|AAH93671.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|85567339|gb|AAI11956.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|312150806|gb|ADQ31915.1| U11/U12 snRNP 35K [synthetic construct]
Length = 251
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIEY+ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 99 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 143
>gi|149063260|gb|EDM13583.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
gi|149063261|gb|EDM13584.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
Length = 244
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER
Sbjct: 44 GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+ AY+ ADG ID + VD E RT++GW+PRR
Sbjct: 104 ALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRR 139
>gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus]
Length = 179
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
YAFIEY+ ER + AY+ ADG ID + VD E RT++GW+PRR
Sbjct: 94 YAFIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTLRGWIPRR 139
>gi|156836695|ref|XP_001642396.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112914|gb|EDO14538.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 20/199 (10%)
Query: 7 PNLLALFA-PRDPVPYLPPVEKLPHEKKTH-GYSGIAAFL--NEFEDPKDTPPPTRVETR 62
PN +AL PR P+ +L + +++KT+ SG+++ L N D + P V T
Sbjct: 9 PNDVALLMKPRAPLKFLKQSDNPLNQRKTNPNISGVSSLLSNNTLTDYMNEFP---VGTD 65
Query: 63 EERLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLR 119
+ L++ R +++ KL+ E+ W+PN+ PN DP++T+F+ R+ YD +E L+
Sbjct: 66 NKHLQKYELVRNQKINELNKLDDELMKWNPNNDPNVKDTDPYRTIFVGRLPYDVNEMDLQ 125
Query: 120 REFEVYGPIKKIVMVHNKVT-------GKPRGYAFIEYEHERDMHSAYKHAD---GKKID 169
+ F +G I+K+ +V +K T G RGYAFI + + A K G +I+
Sbjct: 126 KLFNKFGQIEKVRIVRDKKTITKTNPLGNSRGYAFIVFADQLSSKMACKEIGVHRGIEIN 185
Query: 170 GRRVLVDVERSRTVKGWLP 188
GR +VD+ER RTVK + P
Sbjct: 186 GRNCIVDIERGRTVKYFKP 204
>gi|62078981|ref|NP_001014149.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Rattus
norvegicus]
gi|81910233|sp|Q5U1W5.1|U1SBP_RAT RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|55562850|gb|AAH86435.1| U11/U12 snRNP 35K [Rattus norvegicus]
Length = 244
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
T DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +GYAFIEY+ ER
Sbjct: 44 GVTGDPLLTLFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+ AY+ ADG ID + VD E RT++GW+PRR
Sbjct: 104 ALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRR 139
>gi|241671842|ref|XP_002411425.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
gi|215504074|gb|EEC13568.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
Length = 278
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 86 ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGY 145
A + P+ + DP TLF+ R+N TSE +LR F YG ++ +V + +TG + Y
Sbjct: 40 ATYKPSKY--IKTDPKLTLFVGRLNPTTSEERLREFFAHYGEVRSCRLVRDIITGFSKCY 97
Query: 146 AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDV 205
AF+EY RD +A A+ + ID R+ VD ER R + GW+PRRLGGG GG + G
Sbjct: 98 AFVEYYELRDALAA-NDANQEYIDDYRIFVDFERERVLPGWVPRRLGGGFGGKKESG--- 153
Query: 206 NLKHSGRE 213
L+ GR+
Sbjct: 154 QLRFGGRD 161
>gi|242223332|ref|XP_002477305.1| predicted protein [Postia placenta Mad-698-R]
gi|220723223|gb|EED77497.1| predicted protein [Postia placenta Mad-698-R]
Length = 168
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKD--------- 52
T LPPNLL LFAPR P+PY P++K + G+ A L + K
Sbjct: 1 THLLPPNLLKLFAPRPPLPYTRPLDKDIDRVRKKDVDGVGALLARLREDKTQDLMKSGGV 60
Query: 53 -----TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIA 107
P+ E + RR ER + + + + P+ A DP+KTLFIA
Sbjct: 61 EGMEEGEEPSFTHAEETKRAIRREERKAKKTEEFNKAKETYKPSEDAEAVGDPYKTLFIA 120
Query: 108 RVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
R++ +++ LRREFE +G I+++ +V +K G+ RGYAFI +E ERDM
Sbjct: 121 RLHKSATDNDLRREFEGFGSIERVRIVRDK-KGRSRGYAFIVFERERDM 168
>gi|403179018|ref|XP_003888594.1| hypothetical protein PGTG_22653 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164575|gb|EHS62725.1| hypothetical protein PGTG_22653 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 174
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 97/167 (58%), Gaps = 22/167 (13%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLP----HEKKTHGYSGI-------AAFLNEF--- 47
T LPPNLL LFAPR P+PY P+ + P H+K S + AA NE
Sbjct: 4 THQLPPNLLKLFAPRPPLPYSKPLGRDPDVSIHKKHISCVSPLLDRLKLEAASTNEDGVN 63
Query: 48 -----EDPKD--TPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP 100
+DP PP T ++ + R ERR+ ER + +L +E +DP PNAT DP
Sbjct: 64 QENGEKDPLVDRMPPETLTDSMQVRFERRQEERRRRKEEQLARE-ENYDPKQDPNATGDP 122
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
++TLFI+R++Y+ +ES L+REF++YGPI K+V+V NK+TGK G
Sbjct: 123 YRTLFISRLSYEVTESDLKREFDMYGPIDKLVIVKNKLTGKSPGVCV 169
>gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
DP TLF++R+N T+E KL F YG I+++ +V + VTG + YAF+EY+ ER
Sbjct: 44 GVVGDPLLTLFVSRLNPQTTEDKLYEVFSKYGDIRRLRLVRDIVTGFSKRYAFVEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
+ A + A+ +D V VD E+ RT+KGW+PRRLGGG GG + G L+ GR+
Sbjct: 104 SVVRARRDANKIVVDQHEVFVDFEQERTLKGWVPRRLGGGHGGKKESG---QLRFGGRDR 160
Query: 215 NERERERYRLERERELAGG 233
R+ L +E GG
Sbjct: 161 PFRKPINLGLGLMQERVGG 179
>gi|403292252|ref|XP_003937167.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Saimiri boliviensis boliviensis]
Length = 247
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIE++ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|403292250|ref|XP_003937166.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Saimiri boliviensis boliviensis]
Length = 252
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIE++ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 99 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 143
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHG-YSGIAAFLNEFEDPKDTPPPTRV 59
M +F P N+ LF P P+ Y PV+ E+KT ++ +L + + P
Sbjct: 1 MIKF-PQNVSKLFRPGPPLQYKKPVDYPVEERKTANKIQSLSGYLGALDTYRSEHPEGSE 59
Query: 60 ETREERLERRRRERAEQV-AYKLEQEIALWDPNSFPN-ATMDPFKTLFIARVNYDTSESK 117
+ E A QV A L ++A+W+P+ PN A DP++T+F+ R+ + +E +
Sbjct: 60 NGHLDAYNAA--ENARQVEAKALNAKLAIWNPDEDPNIADSDPYRTIFVGRLPFAVTEVE 117
Query: 118 LRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVL 174
L++EF +G I+K+ +V +K + K RGY FI ++ E SA + G +I GR V+
Sbjct: 118 LQKEFVRFGEIEKVRVVRDKTSNKSRGYGFIMFKDEISARSACREIGVHRGVQIGGRPVI 177
Query: 175 VDVERSRTVKGWLP 188
VD+ER RTVK + P
Sbjct: 178 VDIERGRTVKYFTP 191
>gi|255577755|ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
gi|223530750|gb|EEF32618.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
Length = 389
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP P DPF TLF+ R+++ T+E+ L + YG ++ + +V + VTG
Sbjct: 40 LCFSAGLYDPLGDPKVIGDPFCTLFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTG 99
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RGYAF+EY ER+M AY A ID ++VD R + + GW+PRR
Sbjct: 100 ASRGYAFVEYGTEREMRRAYMDAHHSFIDDSEIIVDYNRQQLMPGWIPRR 149
>gi|440297145|gb|ELP89867.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
invadens IP1]
Length = 388
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 29/210 (13%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEK--LPHEKKTHGYSGIAAFLN------------E 46
M LP NL +LF P +P+ PP EK PH YSGI+ N
Sbjct: 1 MVSVLPKNLQSLFIPNEPIATFPPQEKKFYPH------YSGISDIFNLIKESPPDEATSV 54
Query: 47 FEDPKDTPPPTRVETREERLE---RRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKT 103
EDPK P ++ + L+ +R +A Q A K E W+P T +P +T
Sbjct: 55 LEDPKKPFTPIWTKSGLKALKEYKKRDSIKALQDAMKAE-----WNPTQRTGVTDNPNRT 109
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ V D E +L+ F +G +K ++ V NK GK Y F+E+ H D A +
Sbjct: 110 VFVRGVPKDVEEGELKNIFWEFGDVKNVIFVKNK-KGKRVNYCFVEFVHHSDAERAARRG 168
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGG 193
D +I +RV V++ER R +LP ++GG
Sbjct: 169 DLMRIGEKRVNVEMERGRVDDKFLPTKIGG 198
>gi|344230215|gb|EGV62100.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 22/200 (11%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAF-----------LNEFEDPKDTP 54
P + LF PR P+P++PP + + +KT + I+A+ L + E + +P
Sbjct: 11 PAAIQKLFRPRLPLPFIPPTDYASNTRKTASITPISAYALLIRNYVDQELPQIEAERQSP 70
Query: 55 PPTRVETREERLERRR----RERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVN 110
T + + E+ +RRR + R Q+ E+ L + F DP++T+F++R++
Sbjct: 71 DKTPFQIQAEKTQRRRLDIQKSRQRQLTDWNNPELLLQNEKDF---MKDPYRTVFVSRLD 127
Query: 111 YDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA--DGKKI 168
Y E + + F +GPI+ + ++ + TGK RGY FI +E + D S + G KI
Sbjct: 128 YSLGEIDVSKHFSRFGPIESVRIIRSSSTGKSRGYGFIVFEKDTDAKSCIRELAPTGLKI 187
Query: 169 --DGRRVLVDVERSRTVKGW 186
R +LVD+ER R V+ W
Sbjct: 188 GPGSRTILVDMERGRLVRNW 207
>gi|321460332|gb|EFX71375.1| hypothetical protein DAPPUDRAFT_308886 [Daphnia pulex]
Length = 240
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 86 ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGY 145
AL+ PN T +P TLFI R++ + +E L F YG +K + +V + VTG + Y
Sbjct: 41 ALYHPNHL--LTNNPQTTLFIGRLDKNVTEKDLEDVFIKYGKLKNVTVVRDVVTGYSKRY 98
Query: 146 AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGG 202
F+E++++ D H A + G+++LV+ E T+ GW+PRRLGGG GG + G
Sbjct: 99 GFVEFKNKHDCHEARSELHQTVLKGKKILVEFECQHTLPGWIPRRLGGGFGGKKESG 155
>gi|241951514|ref|XP_002418479.1| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
gi|223641818|emb|CAX43780.2| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 343
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR--- 58
T+ PPN+ LF P+ P PY+ P++ P ++ T S I++ +E E P R
Sbjct: 5 TEKYPPNIQKLFQPKPPFPYISPIDYPPEKRSTKPISPISSLKHEIEKYISQELPERESK 64
Query: 59 ---VETREERLERRRRERAEQVAYKL------EQEIALWD-PNSFPNA----TMDPFKTL 104
V + ++ + ++++ E +L E+++ W+ P F DPF+T+
Sbjct: 65 ASAVPKKISKIVKHKQKQHEANLKRLAKDKDHERQLEEWNNPTLFAKQEREFMKDPFRTV 124
Query: 105 FIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
FIAR++Y+ +E + R F YG I+ I ++ +K GK RGY F+ YE D +
Sbjct: 125 FIARLDYNLTELDISRAFARYGMIESIKIIRDK-QGKSRGYGFVVYERNPDAVACVNDLS 183
Query: 165 --GKKIDGRRVLVDVERSRTVKGWLPR 189
G K+ R +LVD+ERSR +K W PR
Sbjct: 184 RTGLKLGNRPILVDIERSRVLKNWRPR 210
>gi|296213228|ref|XP_002753186.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Callithrix jacchus]
gi|390468332|ref|XP_003733920.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Callithrix jacchus]
Length = 246
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+ R+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVTRLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIE++ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 94 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 138
>gi|296213226|ref|XP_002753185.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Callithrix jacchus]
Length = 251
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+ R+N T E KL+ F YG I+++ +V + VTG +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVTRLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
YAFIE++ ER + AY+ ADG ID + VD E RT+KGW+PR
Sbjct: 99 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPR 143
>gi|294658365|ref|XP_460701.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
gi|202953076|emb|CAG89041.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
Length = 334
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 23/208 (11%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEF--------EDPKDT 53
T+ P N+ LFA + P+ Y P++ + T+ + +++F N++ E K+
Sbjct: 5 TEKYPINIQKLFAVKPPLVYKTPLDYPAESRCTNHITSVSSFRNQWQQYVDDLVEAEKNQ 64
Query: 54 PPPTRVETREERLERRRRERAEQVAYKLEQEIALW-DPNSFPN----ATMDPFKTLFIAR 108
PPP + + E+ R+++ Q +Y+L+ + W DP DPFKT+FI+R
Sbjct: 65 PPPIETIQQVQIREKGRKKQELQKSYQLQ--LNEWNDPELLQKNEQEFMKDPFKTVFISR 122
Query: 109 VNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA--DGK 166
++Y +E + + F YG I+ I +V +K +GK RGY F+ +E + D K G
Sbjct: 123 LDYLLTELDISKNFSKYGVIESITIVRDKKSGKSRGYGFVVFERDEDAKGCIKELAPTGL 182
Query: 167 KID------GRRVLVDVERSRTVKGWLP 188
KI R +LVD+ER R V+ W P
Sbjct: 183 KIPVENKPFTRTILVDMERGRLVRNWKP 210
>gi|156337292|ref|XP_001619850.1| hypothetical protein NEMVEDRAFT_v1g7308 [Nematostella vectensis]
gi|156203808|gb|EDO27750.1| predicted protein [Nematostella vectensis]
Length = 71
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHG-YSGIAAFLNEFEDPKDTPPPTRV 59
MTQ+LPPNLLALFAPRDP+P+ PP++K KKT YSG+ +FL+ FEDPKDTP PT
Sbjct: 2 MTQYLPPNLLALFAPRDPLPFAPPLDKPSWLKKTPWLYSGVGSFLHVFEDPKDTPDPTFG 61
Query: 60 ETREERLERR 69
ETREE++ER+
Sbjct: 62 ETREEKIERK 71
>gi|302766473|ref|XP_002966657.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
gi|300166077|gb|EFJ32684.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
Length = 260
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
+ + L+DP A DP++TLF+ R++ DT+E LR Y I + N VTG
Sbjct: 39 IARTTGLYDPTGDAKALGDPYRTLFVGRLSRDTTEETLREASLFY--TLSICVSRNAVTG 96
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RGYAF+E+E+E+D AY+ A IDG +++VD R + ++GW+PRR
Sbjct: 97 ASRGYAFVEFENEKDFLHAYEAAHNITIDGNQIIVDYNRQQLMRGWIPRR 146
>gi|410915752|ref|XP_003971351.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Takifugu rubripes]
Length = 223
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
D TLF++R+N T+E KL F YG I+++ +V + VTG + YAF+EY+ ER
Sbjct: 44 GVVGDALLTLFVSRLNPQTTEEKLYEVFSKYGDIRRLRLVRDIVTGFSKRYAFVEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
+ A + A+ +D V VD E+ RT+KGW+PRRLGGG GG + G L+ GR+
Sbjct: 104 SVVRARRDANKIVVDQHEVFVDFEQERTLKGWVPRRLGGGHGGKKESG---QLRFGGRD 159
>gi|344302784|gb|EGW33058.1| hypothetical protein SPAPADRAFT_60375 [Spathaspora passalidarum
NRRL Y-27907]
Length = 302
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYS-------GIAAFLNEFEDPKDTP 54
T+ PPN+ LF P+ P Y+PP + P ++ T + I++++ ++ K P
Sbjct: 4 TEKYPPNIQKLFGPKPPFLYIPPTDYPPEQRSTTAIAPISSIKDHISSYITQY---KSEP 60
Query: 55 PPTRVETREERLERRRRERAEQVAYKLEQEIALW-DPNSFPN----ATMDPFKTLFIARV 109
PT T R++++ Q ++ +++A W DP F DP++T+FIAR+
Sbjct: 61 KPTTSTTISTVEAFRQKKQRHQESFT--RQLAQWNDPELFAKNEREFMKDPYRTVFIARL 118
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA--DGKK 167
+Y +E + F YG I+ I ++ +K GK RGY FI +E D + G
Sbjct: 119 DYSVTELDISSAFSKYGVIESIRIIRDK-NGKSRGYGFIVFERTNDAKNCVNELCRSGIL 177
Query: 168 IDGRRVLVDVERSRTVKGWLPRRL 191
+ R LVD ER R ++ W PRRL
Sbjct: 178 LKNRHALVDFERGRIIRNWKPRRL 201
>gi|357154271|ref|XP_003576727.1| PREDICTED: uncharacterized protein LOC100823301 [Brachypodium
distachyon]
Length = 416
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L L+DP P AT +P+ +F+ ++ T + LR+ YG +K + +V + VTG
Sbjct: 43 LCSGAGLYDPFGDPKATGEPYHMVFVGHLSRFTGDETLRKAMSRYGRVKSMRLVRDIVTG 102
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
RGYAF+EYE +++M AY+ A IDG V+VD R + + GW+PRR
Sbjct: 103 ASRGYAFVEYETDKEMRRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRR 152
>gi|363751975|ref|XP_003646204.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889839|gb|AET39387.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 331
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 24/202 (11%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
M++F P + LF PR P+ Y PV+ P +++TH + +++ + F D T V
Sbjct: 5 MSKF-PERVSKLFNPRPPLQYKKPVDYPPEKRRTHFIAPLSSLV--FSD-------TLVR 54
Query: 61 TREER---LERRRRERAEQVAYK-------LEQEIALWDPNSFPNAT-MDPFKTLFIARV 109
+E E R ++ E+V LE E A W P N DPF+T+F+ R+
Sbjct: 55 YMQEHPQGSENRHLDKYEEVRSLTARNERLLEAEQAKWVPEEDSNINDTDPFRTIFVGRL 114
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GK 166
Y+ E +L+++F +G I+++ +V +K+T +P+GYAF+ ++ AY+ G
Sbjct: 115 PYEVDELELQKQFIKFGDIERVRIVRDKLTNEPKGYAFVLFKDTEGSRKAYREIGVHRGL 174
Query: 167 KIDGRRVLVDVERSRTVKGWLP 188
I GR V+VD+ER RTVK + P
Sbjct: 175 LIKGRPVIVDIERGRTVKFFKP 196
>gi|448516947|ref|XP_003867675.1| U1-70K component of the U1 snRNP [Candida orthopsilosis Co 90-125]
gi|380352014|emb|CCG22238.1| U1-70K component of the U1 snRNP [Candida orthopsilosis]
Length = 300
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR------- 58
PP++ LF P+ P+ Y+PP + P E+ T + I+ + N +D D P R
Sbjct: 9 PPDIQKLFQPKPPLVYIPPTDYPPEERSTLPIAPISNYKNYIKDYLDNELPQRESRTFKP 68
Query: 59 -VETREERLERRRRERAEQVAYKLEQEIALW-DPNSFPN----ATMDPFKTLFIARVNYD 112
V +++L + +R +Q ++++ W DP DP+KT+FIAR++Y
Sbjct: 69 EVSEHKKKLLNAQNKRQKQNE-SFDRQMRDWNDPELLAKNEKEVMKDPYKTVFIARLDYS 127
Query: 113 TSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD--GKKIDG 170
+E + + F +G I I+++ + GK RGY FI YE + D + G K+
Sbjct: 128 LTELDISQYFRKFGVIDSILIIRDH-QGKSRGYGFIVYERDADAQACVSELSRTGAKLKE 186
Query: 171 RRVLVDVERSRTVKGWLPRRL 191
R +L+D+ERSR + W PRRL
Sbjct: 187 RTILIDIERSRVWRNWKPRRL 207
>gi|357518363|ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523492|gb|AET03946.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 48/58 (82%)
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
M +AYK ADG+KI+GRRVLVDVER RTV W PRRLGGGLG TR GG +VN +HSGRE
Sbjct: 1 MKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGRE 58
>gi|367005232|ref|XP_003687348.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
gi|357525652|emb|CCE64914.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
Length = 309
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 28/208 (13%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKKTH-GYSG---------IAAFLNEFEDPKDTP 54
P ++ LF P P+ +L ++ H++KT+ SG I++ NE+ +
Sbjct: 8 FPDDVARLFKPNPPLKFLKGIDYPMHKRKTNPNISGITQIQNDRSISSIFNEY----NIQ 63
Query: 55 PPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDT 113
P E ++ + + + +E +++ WDPN+ PN DP++T+F+ R+ YD
Sbjct: 64 FPKGSENGHLKVYNEVKNQKIKEKNSIESKLSAWDPNNDPNIINTDPYRTIFVGRLPYDI 123
Query: 114 SESKLRREFEVYGPIKKIVMVHNK----------VTGKPRGYAFIEYEHERDMHSAYKHA 163
E L++ F YG I+K+ ++ N GK RGY FI +E A+K
Sbjct: 124 DEISLQKIFIKYGQIEKVRIIRNSHGKKENSNTPTVGKSRGYGFIVFEDTYSSKMAFKDI 183
Query: 164 D---GKKIDGRRVLVDVERSRTVKGWLP 188
G +I+GR +VD+ER RTV+ + P
Sbjct: 184 GTHKGIEINGRTCIVDIERGRTVRYFKP 211
>gi|147903467|ref|NP_001090410.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Xenopus
laevis]
gi|123905237|sp|Q05AT9.1|U1SBP_XENLA RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|116063426|gb|AAI23362.1| MGC154877 protein [Xenopus laevis]
Length = 272
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L ++ + PN T DP TLF++R++ T+E KL+ F YG IK+I +V + +TG
Sbjct: 32 LRAMLSRYVPNK--GVTGDPHLTLFVSRLSPQTTEEKLKEVFSRYGDIKRIRLVRDFITG 89
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+GYAFIEY+ E + A++ A+ ID R V VD E R +KGW+PR
Sbjct: 90 FSKGYAFIEYKQENAIMKAHRDANKLVIDQREVFVDFELERNLKGWIPR 138
>gi|302792637|ref|XP_002978084.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
gi|302826427|ref|XP_002994691.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300137142|gb|EFJ04246.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300154105|gb|EFJ20741.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
Length = 189
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
Query: 86 ALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV--------------YGPIKKI 131
L+DP A DP++TLF+ R++ DT+E LR V YG +K +
Sbjct: 44 GLYDPTGDAKALGDPYRTLFVGRLSRDTTEETLREATFVLHELFDLPLQVMSKYGTVKSM 103
Query: 132 VMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
+V + VTG RGYAF+E+E+E+D AY+ A IDG +++VD R + ++GW+PRR
Sbjct: 104 RLVRHIVTGASRGYAFVEFENEKDFLHAYEAAHNITIDGNQIIVDYNRQQLMRGWIPRR 162
>gi|255724646|ref|XP_002547252.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135143|gb|EER34697.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 343
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 24/205 (11%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAF---LNEF--------EDPKDTP 54
PPN+ LF + P P+ P + P +++T S I++ +NE+ ED +
Sbjct: 9 PPNIQKLFQAKPPFPHFEPTDYPPEKRRTASISPISSIKEVINEYLISELPNHEDKSSSK 68
Query: 55 PPTR---VETREERLERRRRERAEQVAYKLEQEIALW-DPNSFPNA----TMDPFKTLFI 106
++ ++++ E + R+ A+Q + ++++ W DP F DP T+FI
Sbjct: 69 SKKSLRIIKHKQKQEEAKIRKTAKQK--EFQRQLDEWNDPAVFAKLEREFMKDPLCTVFI 126
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA--D 164
AR++Y+ +E + + F YG I+ I ++ ++ GK RGY FI YE D S
Sbjct: 127 ARLDYNLTELDISKAFAKYGMIESIRIIRDQ-NGKSRGYGFIVYERNTDAQSCVDELCRS 185
Query: 165 GKKIDGRRVLVDVERSRTVKGWLPR 189
G K+ R +LVD+ERSR +K W PR
Sbjct: 186 GLKLGNRTILVDMERSRVLKNWKPR 210
>gi|260942821|ref|XP_002615709.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
gi|238850999|gb|EEQ40463.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREERLERRRR 71
LF P+ P + P++ PHE+ T + I+A+ +E E T ++ +E ++R
Sbjct: 30 LFTPKLPFLHKQPIDYPPHERATPVITSISAWKSEIEKYC-----TEFKSSDEEQKQRPL 84
Query: 72 ERAEQVAYKLEQEIALW-DPNSFP--NATMDPFKTLFIARVNYDTSESKLRREFEVYGPI 128
+ + L++++ W D +F + DP+KT+F+AR+ Y +E L + F YG I
Sbjct: 85 TKKQLREASLKRQMDDWEDAEAFAKNDFLKDPYKTVFVARLYYSLTELDLSKHFTKYGTI 144
Query: 129 KKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD--GKKID-------GRRVLVDVER 179
+ I ++ N TG+ RGY FI +E E D + + G ID R++LVD+ER
Sbjct: 145 ESIRIIRNTETGQSRGYGFIVFEREADAKNCIRELSPTGLSIDPPSSESKPRKILVDMER 204
Query: 180 SRTVKGWLP 188
R V+ W P
Sbjct: 205 GRLVRNWRP 213
>gi|183229788|ref|XP_001913374.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|169803196|gb|EDS89871.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 372
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
+E I + DP AT +P +T+ + R+ T ES L+R F YG IKKIV++ + + G
Sbjct: 2 IEILINIGDPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKD-LKG 60
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGL 195
+GYAF+EY H + A + A+G +I+ + ++V++E+ RT + + P+RLGG +
Sbjct: 61 INKGYAFVEYNHRSEAERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTI 115
>gi|355721028|gb|AES07129.1| small nuclear ribonucleoprotein 70kDa [Mustela putorius furo]
Length = 70
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 62/67 (92%)
Query: 151 EHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHS 210
EHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN++HS
Sbjct: 1 EHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHS 60
Query: 211 GREDNER 217
GR+D R
Sbjct: 61 GRDDTSR 67
>gi|198412895|ref|XP_002120814.1| PREDICTED: similar to U11/U12 snRNP 35 kDa protein [Ciona
intestinalis]
Length = 120
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
F +G ++K+ +V + VTG RGYAF+EY+ R + AY A+G +DG+ +LVD E R
Sbjct: 8 FSKFGGLEKVTLVRDMVTGYSRGYAFVEYKDTRPLKVAYHEANGLMVDGKNILVDYEHER 67
Query: 182 TVKGWLPRRLGGGLGGTRRGG 202
++GW+PRRLGGG G + G
Sbjct: 68 LMEGWVPRRLGGGFAGKKEAG 88
>gi|432897351|ref|XP_004076429.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oryzias latipes]
Length = 220
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
DP T+F+AR+N TSE KL++ F YG IK++ +V + VTG +GY FIEY+ ER
Sbjct: 44 GVVGDPLLTVFVARLNPQTSEEKLQQIFSKYGDIKRLRLVRDIVTGFSKGYGFIEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+ A + A+ +D + VD E+ RT+KGW+PR
Sbjct: 104 SLTRARRDANKLVVDQHELFVDFEQERTLKGWIPR 138
>gi|291228234|ref|XP_002734084.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)-like
[Saccoglossus kowalevskii]
Length = 192
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 94 PN--ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
PN T D KT+F+AR+N +T+E + + F YG IK++ +V + VTG +GYAF+EY
Sbjct: 44 PNKAITGDAEKTVFVARLNLNTTEETIEKTFSRYGEIKRLKLVRDIVTGFSKGYAFVEYC 103
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRL 191
++ A + AD +DG + VD+E R +KGW+PRRL
Sbjct: 104 SQKSAERAERKADKLIVDGSELFVDLECERKLKGWIPRRL 143
>gi|410084527|ref|XP_003959840.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
gi|372466433|emb|CCF60705.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
Length = 285
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 22/197 (11%)
Query: 5 LPPNLLALFAPRDPVPYLPPVEKLPHEKK---------THGYSGIAAFLNEFEDPKDTPP 55
P ++ LF P P+PY P + P E++ ++ + + ++NE+ D TP
Sbjct: 8 FPSDVTRLFKPNPPLPYKRPSD-YPEEQRRTNPNITPVSNYLAQLTDYINEYSD--GTP- 63
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDP-NSFPNATMDPFKTLFIARVNYDTS 114
E E R + + + Y L E+ WDP N + DP+KT+FI R+ Y+ +
Sbjct: 64 ----NKHLEAYEEIRTSQLQNLEY-LHNELQKWDPMNDVNSQNTDPYKTIFIGRLPYNVT 118
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGR 171
E +L++ F +G I+KI +V + T KP+GY FI + A + G +I+GR
Sbjct: 119 EIELQKIFIKFGEIEKIRIVKDIKTDKPKGYGFILFNEANAAKMAVREIGTHRGIEINGR 178
Query: 172 RVLVDVERSRTVKGWLP 188
+VD+ER R+VK + P
Sbjct: 179 SCIVDIERGRSVKYFKP 195
>gi|348518549|ref|XP_003446794.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oreochromis niloticus]
Length = 237
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
DP TLF++R+N T+E KL + F YG I+++ +V + VTG +GYAFIEY+ ER
Sbjct: 44 GVVGDPLLTLFVSRLNPQTTEDKLHKVFSKYGDIQRLRLVRDIVTGFSKGYAFIEYKEER 103
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+ A + A+ +D V VD E+ RT+KGW+PR
Sbjct: 104 SVVRARRDANKLVVDQHEVFVDFEQERTLKGWVPR 138
>gi|71834616|ref|NP_001025412.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Danio
rerio]
gi|123916690|sp|Q4KMD3.1|U1SBP_DANRE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|68533621|gb|AAH98619.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Danio rerio]
Length = 208
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 85 IALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG 144
+A + PN DP TLF+AR+N T+E KLR F +G I+++ +V + VTG +
Sbjct: 35 LARYKPNR--GVCGDPDLTLFVARLNPQTTEEKLRDVFSKFGDIRRLRLVRDVVTGFSKR 92
Query: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRL 191
YAFIEY+ ER + A++ A+ +D +LVDVE+ RT+ GW PRRL
Sbjct: 93 YAFIEYKEERSLKRAWRDANKLILDQYELLVDVEQERTLPGWRPRRL 139
>gi|365765125|gb|EHN06639.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I GR +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKGRVCIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFKP 196
>gi|328766959|gb|EGF77011.1| hypothetical protein BATDEDRAFT_92222 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P T P +TLF+ R+ ++ L F YG + + ++ N +TG+ RGYAF+E E +
Sbjct: 35 PTITTTPSRTLFVGRLAPSVTQDILADTFRPYGTVLQCRIIVNNITGQSRGYAFVEMESQ 94
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
D+++A + G + G+ +LVD E RTV GW+PRR
Sbjct: 95 HDVNAAIRACHGIHLHGQHILVDTEHGRTVTGWIPRR 131
>gi|322780458|gb|EFZ09946.1| hypothetical protein SINV_14798 [Solenopsis invicta]
Length = 54
Score = 84.7 bits (208), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/48 (72%), Positives = 40/48 (83%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFE 48
MTQFLPPNLLALF+PR+P+PYLPP KLPHEKK GY+G+ FL FE
Sbjct: 7 MTQFLPPNLLALFSPREPIPYLPPASKLPHEKKNGGYTGVGTFLKYFE 54
>gi|346465439|gb|AEO32564.1| hypothetical protein [Amblyomma maculatum]
Length = 327
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
RA + YK + + DP T+F+AR++ T+E +R YG IK
Sbjct: 81 RAMEATYKTSKHV-----------KTDPRVTVFVARLSPATNEDTIREXXXQYGDIKNCH 129
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
+V + VTG + YAFIE+ +D +A A+ ID ++ VD E+ R + GW+PRRLG
Sbjct: 130 LVRDVVTGFSKRYAFIEFYDTKDALAACG-ANQLAIDDCKIFVDFEQERVLPGWIPRRLG 188
Query: 193 GGLGGTRRGG 202
GG GG + G
Sbjct: 189 GGFGGKKESG 198
>gi|193631809|ref|XP_001951817.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Acyrthosiphon pisum]
Length = 300
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
+P T+F+ R++ DT+E L EF YG + + +V + +TG + YAFIEYE + +
Sbjct: 62 NPLNTIFVGRLSLDTTEKDLENEFCRYGKMIALRLVKDLITGLSKRYAFIEYETFKMALN 121
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGR 212
Y + +V VD E R + GW PRRLGGG GG ++ G L+ GR
Sbjct: 122 TYVLCKKLVLKNSQVFVDFECGRLLPGWKPRRLGGGFGGEKQSG---QLRFGGR 172
>gi|50305197|ref|XP_452557.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641690|emb|CAH01408.1| KLLA0C08019p [Kluyveromyces lactis]
Length = 301
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 5 LPPNLLALFAPRDPVPYLPP--VEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPT----R 58
LP ++ LF P LPP V ++ K + +G++A L + K P
Sbjct: 20 LPSSVSKLFTQGPP---LPPSRVRVRRNQNKKYALTGVSAVLQHVSEYKKATHPVSENQH 76
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
++ +E + +E+ E L ++I W P S N + DP++TLF+ R++Y E +L
Sbjct: 77 LKVYDEAMNESHKEQEE-----LMKKIQEWHPESDANISSDPYRTLFVGRLHYAVDEVEL 131
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLV 175
++ F YG I+ +V ++ GK RGY F+++ D ++ G +I GR +V
Sbjct: 132 QKSFVKYGDIESCRIVRDQ-DGKSRGYGFVQFTSYEDSKQCFRELGVRKGIEIMGRTSIV 190
Query: 176 DVERSRTVKGWLP 188
D+ER RTVK + P
Sbjct: 191 DIERGRTVKFFKP 203
>gi|294461893|gb|ADE76503.1| unknown [Picea sitchensis]
Length = 221
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 82/173 (47%), Gaps = 68/173 (39%)
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
H RDM +AYK ADG+KID RRVLVDVER RTV W PRRLGGGLG TR GG +VN K+SG
Sbjct: 2 HTRDMKTAYKQADGRKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSG 61
Query: 212 REDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRR 271
RE + L+ GPPR
Sbjct: 62 RE-------------PQLLSTGPPR----------------------------------- 73
Query: 272 RRRSRERIRDDDIEEVEFRPK---DRSDRD----RDRDRK-RRRERENSEDRN 316
IEE + R + DRS+RD RDRDR R RE E S +R+
Sbjct: 74 ------------IEEPKIREERHDDRSERDNERERDRDRNVREREPERSHERS 114
>gi|375152292|gb|AFA36604.1| U1 snRNP-interacting 70 kDa protein, partial [Lolium perenne]
Length = 77
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSE 115
PT ETR E+ +R R+ + EQ A K+ +E+ +DP + PN T DP+KTLF+AR+NY+TSE
Sbjct: 1 PT-CETRAEKKDRIRQLKLEQGAAKVAEELQKYDPQNDPNVTGDPYKTLFVARLNYETSE 59
Query: 116 SKLRREFEVYGPIKKIVM 133
K++R+FE YGPIK++ +
Sbjct: 60 QKVKRDFEAYGPIKRVSI 77
>gi|354543650|emb|CCE40371.1| hypothetical protein CPAR2_104090 [Candida parapsilosis]
Length = 302
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 33/209 (15%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIA---AFLNEFEDPKDTPPPTRVETR 62
PP++ LF P+ P+ ++PP + P ++ T S ++ +F+ ++ D + R
Sbjct: 9 PPDIQKLFQPKPPIVHIPPTDYPPEKRSTLSISPVSNYKSFIKKYVD-------NELPQR 61
Query: 63 EERLERRRRERAEQVAY-----------KLEQEIALW-DPNSFP---NATM-DPFKTLFI 106
E R+++ + Q +++ W DP N M DP+KT+FI
Sbjct: 62 ESRVQKTAMSKHRQKLLLANDRRKKQSDSFNRQMRDWNDPELLAKNENEVMKDPYKTVFI 121
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMV--HNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
AR++Y +E + + F YG I I ++ HN G+ RGY FI +E E D +
Sbjct: 122 ARLDYTLTELDISQYFRKYGVIDSISIIRDHN---GRSRGYGFIVFEREADAQACISELS 178
Query: 165 --GKKIDGRRVLVDVERSRTVKGWLPRRL 191
G K+ R +LVDVERSR + W PRRL
Sbjct: 179 RTGVKMKERTILVDVERSRVWRNWKPRRL 207
>gi|190345461|gb|EDK37350.2| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 27/209 (12%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAF----------LNEFEDPKDTPP 55
PP + LFAPR P+ ++PP++ P ++ T S ++ + + E + DT
Sbjct: 10 PPTIKKLFAPRPPLLHVPPLDYPPEKRSTKPVSPVSKWKEIYQEHAQRIREENETTDTAV 69
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSF----PNATMDPFKTLFIARVNY 111
T ++ + + +R R +AE ++E+ + DP+ DP+ TLFIAR++Y
Sbjct: 70 ETTLQKQAKARAKRERAQAESFQRQMEEWL---DPSLAEKHEKEVMKDPYCTLFIARLDY 126
Query: 112 DTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK--HADGKKID 169
D +E ++ + F +G I I ++ + GK +GY F+ +E + D + + + G KI
Sbjct: 127 DVTEVEVSQSFSRFGAIASIRIIRDN-EGKSKGYGFVVFERDTDAATCVRELASTGIKIG 185
Query: 170 G-------RRVLVDVERSRTVKGWLPRRL 191
R LVD+ERSR ++ W PRRL
Sbjct: 186 PESSDRKPRTALVDIERSRVIRNWKPRRL 214
>gi|323348131|gb|EGA82385.1| Snp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 300
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I R +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRVCIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFXP 196
>gi|323304496|gb|EGA58262.1| Snp1p [Saccharomyces cerevisiae FostersB]
Length = 300
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I R +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRXCIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFKP 196
>gi|150865863|ref|XP_001385249.2| hypothetical protein PICST_32340 [Scheffersomyces stipitis CBS
6054]
gi|149387119|gb|ABN67220.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 314
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFED------PKDTPP 55
T+ PP++ LFAP+ P+ YL + ++ T + ++A+ +E + +D+
Sbjct: 5 TEKYPPDIQKLFAPKPPLLYLSSSDFAAGQRATASITPVSAWRSEIDKYTVQLKEQDSSS 64
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALW-DPNSFPN----ATMDPFKTLFIARVN 110
+ T+ + E RE+ ++++ W DP DP++T+F++R++
Sbjct: 65 IKKQPTKHQLQEEAAREKQLLKRESFKRQLREWNDPEILHQNEKEFMKDPYRTIFVSRLD 124
Query: 111 YDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA--DGKKI 168
+ +E + + F YG I+ + ++ + VTGK RGY FI +E E D S G ++
Sbjct: 125 FSLTELDISKHFSKYGVIESVRIIRDSVTGKSRGYGFIVFEREWDAQSCISEVARTGVRL 184
Query: 169 --DGRRVLVDVERSRTVKGWLP 188
R +LVD+ER R V W P
Sbjct: 185 PQAKRTILVDIERGRIVSNWRP 206
>gi|146419632|ref|XP_001485777.1| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 27/209 (12%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAF----------LNEFEDPKDTPP 55
PP + LFAPR P+ ++PP++ P ++ T S ++ + + E + DT
Sbjct: 10 PPTIKKLFAPRPPLLHVPPLDYPPEKRSTKPVSPVSKWKEIYQEHAQRIREENETTDTAV 69
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPN----ATMDPFKTLFIARVNY 111
T ++ + + +R R +AE ++E+ + DP+ DP+ TLFIAR++Y
Sbjct: 70 ETTLQKQAKARAKRERAQAESFQRQMEEWL---DPSLAEKHEKEVMKDPYCTLFIARLDY 126
Query: 112 DTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK--HADGKKID 169
D +E ++ + F +G I I ++ + GK +GY F+ +E + D + + + G KI
Sbjct: 127 DVTEVEVSQSFSRFGAIASIRIIRDN-EGKSKGYGFVVFERDTDAATCVRELASTGIKIG 185
Query: 170 G-------RRVLVDVERSRTVKGWLPRRL 191
R LVD+ERSR ++ W PRRL
Sbjct: 186 PESSDRKPRTALVDIERSRVIRNWKPRRL 214
>gi|336268440|ref|XP_003348985.1| hypothetical protein SMAC_02006 [Sordaria macrospora k-hell]
gi|380094245|emb|CCC08462.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 135
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 77/133 (57%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVE 60
MT LPPNLLALFAPR P+ ++PP + P E+K+ + +A FL + + E
Sbjct: 1 MTDRLPPNLLALFAPRPPLRWVPPCDVAPEERKSAFITPVADFLPAMQAYEQEYEYHPTE 60
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
+ E +R++RE+ E + L + ++PN PN D FKTL +AR++Y E L R
Sbjct: 61 SWLEARDRKKREKKEALEKLLTEGPKNYNPNDDPNIRGDAFKTLIVARLDYRADEQDLER 120
Query: 121 EFEVYGPIKKIVM 133
EF +GPI+++ +
Sbjct: 121 EFSRFGPIERVSL 133
>gi|323354596|gb|EGA86432.1| Snp1p [Saccharomyces cerevisiae VL3]
Length = 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I R +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKBRVCIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFKP 196
>gi|256269775|gb|EEU05041.1| Snp1p [Saccharomyces cerevisiae JAY291]
Length = 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I R +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRVCIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFKP 196
>gi|190406278|gb|EDV09545.1| hypothetical protein SCRG_05237 [Saccharomyces cerevisiae RM11-1a]
gi|207344323|gb|EDZ71507.1| YIL061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147197|emb|CAY80450.1| Snp1p [Saccharomyces cerevisiae EC1118]
gi|323333165|gb|EGA74565.1| Snp1p [Saccharomyces cerevisiae AWRI796]
gi|323337193|gb|EGA78447.1| Snp1p [Saccharomyces cerevisiae Vin13]
gi|392298660|gb|EIW09756.1| Snp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I R +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRVCIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFKP 196
>gi|6322128|ref|NP_012203.1| Snp1p [Saccharomyces cerevisiae S288c]
gi|266985|sp|Q00916.1|RU17_YEAST RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein SNP1; Short=U1 snRNP protein SNP1
gi|4504|emb|CAA42602.1| U1 snRNP 70K protein homologue [Saccharomyces cerevisiae]
gi|557808|emb|CAA86162.1| snp1 [Saccharomyces cerevisiae]
gi|45270060|gb|AAS56411.1| YIL061C [Saccharomyces cerevisiae]
gi|151943102|gb|EDN61437.1| U1 70K [Saccharomyces cerevisiae YJM789]
gi|285812590|tpg|DAA08489.1| TPA: Snp1p [Saccharomyces cerevisiae S288c]
gi|349578892|dbj|GAA24056.1| K7_Snp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 12 LFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEF------EDPKDTPPPTRVETREE 64
LF PR P+ Y P + +++T+ +G+A L+ E P+ +P
Sbjct: 15 LFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSP--------NN 66
Query: 65 RLERRRRERAEQV--AYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRRE 121
L+R + ++ A L++ + W+PN P+ DP++T+FI R+ YD E +L++
Sbjct: 67 HLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKY 126
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVE 178
F +G I+KI +V +K+T K +GYAFI ++ A+K G +I R +VD+E
Sbjct: 127 FVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIE 186
Query: 179 RSRTVKGWLP 188
R RTVK + P
Sbjct: 187 RGRTVKYFKP 196
>gi|405972647|gb|EKC37405.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Crassostrea
gigas]
Length = 226
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP T+F++R+N T E L +F +G I KI +V + +TG RGYAF+E++ R
Sbjct: 34 DPNLTVFVSRLNPKTDEDTLESQFSYFGEIHKIRLVRDIITGHSRGYAFVEFKEGRSAVR 93
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
A + G +IDG VLVD E RT+ GW+PRR
Sbjct: 94 AERDGHGMEIDGYEVLVDFELERTLPGWVPRR 125
>gi|339240951|ref|XP_003376401.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
gi|316974884|gb|EFV58354.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
Length = 185
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 61/91 (67%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP KTLF+ R++ DT E+ + + F YG I +I +V + VTG + YAF+E++H RDM
Sbjct: 59 DPKKTLFVGRLSLDTVEADIHQLFGRYGKIARIRLVRDIVTGMSKRYAFVEFKHRRDMDV 118
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
A+++A ID +++VD E R ++GW+PR
Sbjct: 119 AWENAHHAIIDSSQIIVDREVERRMEGWIPR 149
>gi|221126097|ref|XP_002166019.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Hydra magnipapillata]
Length = 218
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 25 VEKLPHEKKTH-GYSGIAAFLNEFE----DPKDTPPPTRVETREERLERRRRERAEQVAY 79
+ LP+E T +S IA F + D DT P + R +
Sbjct: 8 ICFLPYELPTFDNWSPIATFYHPLMAGSIDGTDTVPHDKAVIRASK-------------- 53
Query: 80 KLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT 139
+++ PN T DP KT+ + ++ T+ES +++ F+ +G I+K +V + +T
Sbjct: 54 ------SVYKPNK--KVTGDPRKTIMVRHLSLTTNESTIKQIFQRFGEIRKCRLVRDIIT 105
Query: 140 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLP 188
G R YAFIEY HERD A + ID +V +D E SRT+ GW+P
Sbjct: 106 GNSRCYAFIEYSHERDARHASRETKDLIIDECKVTIDFECSRTLPGWIP 154
>gi|365987429|ref|XP_003670546.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
gi|343769316|emb|CCD25303.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
Length = 323
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 8 NLLALFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEFEDPKDTPPPTRVETREERL 66
++ +F PR P+ + P + H ++T+ +GI+ ++N T T E
Sbjct: 16 DISTIFKPRPPLRHFKPTDYPVHRRRTNPNITGISKYINSHLLSYVKEYSTTTTTNSEVT 75
Query: 67 ERRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRREFEVY 125
E ++A + ++ + W+P+ PN DP++T+F+ R+ YD E +L++ F +
Sbjct: 76 ENNEVVLGNKIAQENKEALDKWNPHEDPNIKDTDPYRTIFVGRLPYDIDELQLQKHFLKF 135
Query: 126 GPIKKIVMVHNKV-TGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVERSR 181
G I+KI +V +K K +GY FI + A K G +I+GR +VD+ERSR
Sbjct: 136 GQIEKIRIVRDKFNNNKSKGYGFIVFHDPISSKMACKEIGVHRGLEINGRICIVDIERSR 195
Query: 182 TVKGWLP 188
TVK + P
Sbjct: 196 TVKYFRP 202
>gi|365760179|gb|EHN01919.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 78 AYKLEQEIALWDPNSFPNA-TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHN 136
++ +++++ W+PN+ P+ DP++T+FI R+ YD +E +L++ F +G I+KI +V +
Sbjct: 82 SHLIDRKLQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEIEKIRIVKD 141
Query: 137 KVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVERSRTVKGWLP 188
K+T + RGYAFI ++ A+K G +I + +VD+ER RTVK + P
Sbjct: 142 KITQQSRGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIERGRTVKYFKP 196
>gi|401839251|gb|EJT42547.1| SNP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 78 AYKLEQEIALWDPNSFPNA-TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHN 136
++ +++++ W+PN+ P+ DP++T+FI R+ YD +E +L++ F +G I+KI +V +
Sbjct: 82 SHLIDRKLQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEIEKIRIVKD 141
Query: 137 KVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVERSRTVKGWLP 188
K+T + RGYAFI ++ A+K G +I + +VD+ER RTVK + P
Sbjct: 142 KITQQSRGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIERGRTVKYFKP 196
>gi|50294956|ref|XP_449889.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529203|emb|CAG62869.1| unnamed protein product [Candida glabrata]
Length = 299
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 81 LEQEIALWDPNSFPNA-TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT 139
+EQ++ WDP S + DP+KT+F+ R+ YDT E +L++ F YG I ++ +V +K
Sbjct: 93 VEQQLLQWDPLSDNHMRDTDPYKTVFVGRLPYDTDEVQLQKVFAKYGEIVRVRVVRDK-Q 151
Query: 140 GKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVERSRTVKGWLP 188
K RGYAF+ ++ + G +I+GRR +VD+ER RT+K + P
Sbjct: 152 NKSRGYAFVLFKETDSARVCTRDIGVHRGIQINGRRCIVDIERGRTIKFFKP 203
>gi|401625267|gb|EJS43283.1| snp1p [Saccharomyces arboricola H-6]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFL-NEFEDPKDTPPPTRVETRE 63
P ++ LF + P+PY P + +++T+ +G+A L N + + P
Sbjct: 9 PDDVSKLFRAKPPLPYKKPTDYPYAKRQTNPNITGVANLLSNSLKQYIEEFPEGTANNHL 68
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNAT-MDPFKTLFIARVNYDTSESKLRREF 122
++ E + + + + +++ + W+PN P+ DP++T+FI R+ Y+ +E +L++ F
Sbjct: 69 QKYEDVKSSKIKN-SQLIDRRLQSWNPNVDPHIKDTDPYRTIFIGRLPYNINEIELQKHF 127
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVER 179
+G I+KI +V ++ T + +GYAFI ++ A+K G +I+ R +VD+ER
Sbjct: 128 VRFGEIQKIRIVKDRTTQQSKGYAFIVFKDPISSKMAFKEIGVHRGIQIEDRICIVDIER 187
Query: 180 SRTVKGWLP 188
RTVK + P
Sbjct: 188 GRTVKYFKP 196
>gi|322798651|gb|EFZ20255.1| hypothetical protein SINV_12300 [Solenopsis invicta]
Length = 178
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
N P +TLF+AR+ ++ L+ F YG + ++ + VTG +GY F+E + E
Sbjct: 47 NLESKPERTLFVARLGPKVTKYDLKELFSKYGEVISAKVIVDVVTGLSQGYGFVEMKSED 106
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGG 202
+ A + + G ++ VD E RT+KGW PRRLGGG GG + G
Sbjct: 107 EARRALRRTIDATLKGYKIFVDYECGRTLKGWKPRRLGGGFGGKKESG 154
>gi|403218287|emb|CCK72778.1| hypothetical protein KNAG_0L01580 [Kazachstania naganishii CBS
8797]
Length = 305
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 1 MTQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTH-GYSGIAAFLNEFEDPKDTPPPTRV 59
M++F PP++ LF+ P+PY P++ +++T+ +G+ +L+ K+ P
Sbjct: 1 MSKF-PPDVAELFSRGPPLPYRKPIDYPLEKRRTNPNITGLTKYLSSLHQYKEEFPRGTA 59
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPN-ATMDPFKTLFIARVNYDTSESKL 118
E + E+ +++ KL+ W P PN A DP+KT+F+ R+ YDT+E L
Sbjct: 60 NKHLRVYEDVKHEKEKEMD-KLQLLCEEWKPAEDPNIAGTDPYKTIFVGRLPYDTTELDL 118
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEY----EHERDMHSAYKHADGKKIDGRRVL 174
+ F YG + K+ +V +K + K RGY F+ + +R M H G I GR +
Sbjct: 119 QEIFGKYGAVDKVRVVRDK-SNKSRGYGFVLFADPQASKRTMRETGVH-RGIPIKGRTCI 176
Query: 175 VDVERSRTVKGWLP 188
VD ER RT + + P
Sbjct: 177 VDFERGRTNRYFTP 190
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
+P T+FI R+ + +E +LR +F +G I +V + VTG PRGYAFIEY +
Sbjct: 58 NPLHTIFIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYSARGEALR 117
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLP 188
A + G IDG+ +LVD E R ++GW P
Sbjct: 118 AIERMHGVTIDGKEILVDEEWERRLEGWKP 147
>gi|358374537|dbj|GAA91128.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Aspergillus
kawachii IFO 4308]
Length = 447
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +GPI ++ +K TG YAFIE+E+++D A
Sbjct: 229 PENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQA 288
Query: 160 YKHADGKKIDGRRVLVDVER--SRTVKGW----LPRRLG--GGLGGTRRGGPDVNLKHSG 211
Y G ID R+ VD + S+ + W + +R G GG GG G + ++
Sbjct: 289 YFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATITKRSGQRGGFGGV--AGLEKKRQYRA 346
Query: 212 REDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRR 271
E+ + + Y + ++ P+AR SN ER R R +R+RR SRS RD
Sbjct: 347 TENTRQRDDDYHMVFDKN----APKAR--SNRDERSYSRSPPRKSQRERRVSRSPRRDSY 400
Query: 272 RRRSRER 278
R R R+R
Sbjct: 401 RNRYRDR 407
>gi|68486606|ref|XP_712797.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
gi|46434210|gb|EAK93626.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
Length = 305
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DPF+T+FIAR++Y+ +E + R F YG I+ I ++ +K GK RGY F+ YE D +
Sbjct: 77 DPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRDK-QGKSRGYGFVVYERNTDAMN 135
Query: 159 AYKHAD--GKKIDGRRVLVDVERSRTVKGWLPR 189
G K+ R +LVD+ERSR +K W PR
Sbjct: 136 CVNDLSRTGLKLGNRPILVDIERSRVLKNWRPR 168
>gi|390355488|ref|XP_790452.3| PREDICTED: uncharacterized protein LOC585534 [Strongylocentrotus
purpuratus]
Length = 405
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P+ DP TLF+AR+N +T+E LR+ F YG IK++ ++ + VTG + YAFIE+E E
Sbjct: 42 PSVDNDPHLTLFVARLNPETTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEFEEE 101
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
R A AD I+ V VD E T+ GW+PRR
Sbjct: 102 RSARRARAEADQSVIEEHIVFVDWECEHTLDGWIPRR 138
>gi|390358352|ref|XP_001182912.2| PREDICTED: uncharacterized protein LOC753629 [Strongylocentrotus
purpuratus]
Length = 413
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P+ DP TLF+AR+N +T+E LR+ F YG IK++ ++ + VTG + YAFIE+E E
Sbjct: 42 PSVDNDPHLTLFVARLNPETTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEFEEE 101
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
R A AD I+ V VD E T+ GW+PRR
Sbjct: 102 RSARRARAEADQSVIEEHIVFVDWECEHTLDGWIPRR 138
>gi|68486549|ref|XP_712825.1| hypothetical protein CaO19.14156 [Candida albicans SC5314]
gi|46434241|gb|EAK93656.1| hypothetical protein CaO19.14156 [Candida albicans SC5314]
Length = 233
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DPF+T+FIAR++Y+ +E + R F YG I+ I ++ +K GK RGY F+ YE D +
Sbjct: 3 DPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRDK-QGKSRGYGFVVYERNTDAMN 61
Query: 159 AYKHA--DGKKIDGRRVLVDVERSRTVKGWLPR 189
G K+ R +LVD+ERSR +K W PR
Sbjct: 62 CVNDLIRTGLKLGNRPILVDIERSRVLKNWRPR 94
>gi|145245753|ref|XP_001395137.1| peptidylprolyl isomerase [Aspergillus niger CBS 513.88]
gi|134079845|emb|CAK40978.1| unnamed protein product [Aspergillus niger]
gi|350637615|gb|EHA25972.1| hypothetical protein ASPNIDRAFT_189410 [Aspergillus niger ATCC
1015]
Length = 464
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +GPI ++ +K TG YAFIE+E+++D A
Sbjct: 246 PENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQA 305
Query: 160 YKHADGKKIDGRRVLVDVER--SRTVKGW----LPRRLG--GGLGGTRRGGPDVNLKHSG 211
Y G ID R+ VD + S+ + W + +R GG GG G + ++
Sbjct: 306 YFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATITKRSSQRGGFGGV--AGLEKKRQYRA 363
Query: 212 REDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRR 271
E+ + + Y + ++ PRA+SG + ER R R +R+RR SRS RD
Sbjct: 364 TENTRQRDDDYHMVFDKN----APRAKSGRD--ERSLSRSPPRKPQRERRVSRSPRRDSY 417
Query: 272 RRRSRER 278
R R R+R
Sbjct: 418 RNRYRDR 424
>gi|194909374|ref|XP_001981933.1| GG12319 [Drosophila erecta]
gi|190656571|gb|EDV53803.1| GG12319 [Drosophila erecta]
Length = 654
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 146/334 (43%), Gaps = 70/334 (20%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTDGMTTEELQEMLAEREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSSFGMLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLER 226
ID RR+ VD +S + W R G G+ G G D + ++ + R R E
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGVVGDY-GKLDFDNLRDNKDHRKSNDGRSRTED 361
Query: 227 ERELA-GGPPRARSGSNDRERERE---------------RRRSRSRERKRRTSRSRSRD- 269
RE PR R S +R++ RE RRR+RSRE K+ +RSRSR+
Sbjct: 362 HREPKRADDPRNRMSSAERKKAREQRHQEQSERDDRKNVRRRTRSRE-KQEQNRSRSRNW 420
Query: 270 ----RRRRRSRERIRDDDIEEVEFRPKDRSDRDRDR-----------------------D 302
R+ RERIR+ +RS R RDR +
Sbjct: 421 PNGSARKNSDRERIRN-----------ERSSRSRDRTHRRHSRSRDREERRRSRPRDQLE 469
Query: 303 RKRRRERENSEDRNERKRDRKERRKERERNNEER 336
R+R R R+ E R R R++ ERR+ R R+ E+
Sbjct: 470 RERSRSRDQKERRRSRPREQNERRRSRSRDQTEK 503
>gi|260790715|ref|XP_002590387.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
gi|229275579|gb|EEN46398.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
Length = 213
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP TLF++ +N T+E L + F +G + + +V + VTG + YAFIEY E+ M
Sbjct: 53 DPRCTLFVSNLNPKTTEDSLEKVFSKFGDLVRTRLVRDIVTGYSKRYAFIEYVDEKSMWH 112
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
A++ A +++ V VDVE SRT+KGW+PR
Sbjct: 113 AHRKAYKMELEQYEVFVDVENSRTLKGWVPR 143
>gi|149245162|ref|XP_001527115.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449509|gb|EDK43765.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 305
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP++T+FIAR++Y +E + + F+ YG I+ I ++ ++ GK RGY FI +E+E D ++
Sbjct: 3 DPYRTVFIARLDYSLTELDVTQHFQKYGIIESIKIIRDR-EGKSRGYGFIVFENEADANT 61
Query: 159 AYKHAD--GKKIDGRRVLVDVERSRTVKGWLPRRL 191
G K+ R LVD+ERSR ++ W PRRL
Sbjct: 62 CVNKTSRLGVKLGNRTALVDIERSRILRNWKPRRL 96
>gi|443707095|gb|ELU02850.1| hypothetical protein CAPTEDRAFT_133662 [Capitella teleta]
Length = 218
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
+P T+F+ R+N+ T+E L +F+ YG I+ I ++ + VTG +GYAF+EY
Sbjct: 48 NPECTVFVGRLNHSTTEETLEEQFKRYGNIEHIRLIRDIVTGFSQGYAFVEYTEPNAACR 107
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPRR 190
A A+ ID + ++VD+E RT+ GW+PRR
Sbjct: 108 ASIEANKIVIDDKEIMVDMECERTMPGWVPRR 139
>gi|149055936|gb|EDM07367.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_e [Rattus norvegicus]
Length = 352
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 74/118 (62%), Gaps = 8/118 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L +A + + ++ FE G + +T P G + + +AYKHA
Sbjct: 14 LLVAWLTGGSVSVCVQMWFEGQG----CCCMEPCLTRGPSG----DSPSPTSVAAAYKHA 65
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERER 221
DGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D R ER
Sbjct: 66 DGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDER 123
>gi|391339647|ref|XP_003744159.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Metaseiulus occidentalis]
Length = 186
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
L E A + P P DP KT+F+ R+ D +E +LR F G ++ + +V +K++
Sbjct: 25 LRAETAKFKP---PKLDTDPSKTVFVGRLPLDLTEDRLREVFSGCGTLRNLHLVRHKISR 81
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLP 188
+GYAF+ ++H D++ A G +I G+R+LV+ E R + GW P
Sbjct: 82 ASQGYAFLTFKHSADVNRAIA-LHGSEIGGKRILVEREVGRLLPGWKP 128
>gi|212546055|ref|XP_002153181.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064701|gb|EEA18796.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 369
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E+L R R RA+ + ++ ++ D P LF+ ++N T + L F
Sbjct: 132 EQLRREREARAQALTLEMVGDLPFADVKP-------PENVLFVCKLNPVTQDEDLHLIFS 184
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--SR 181
+GPI ++ +K TG YAFIE+E+++D AY +G ID R+ VD + S+
Sbjct: 185 RFGPILSCEVIRDKKTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDFSQSVSK 244
Query: 182 TVKGW----LPRRLGGGLGGT 198
W + +R GGG GG
Sbjct: 245 LSDTWRQATVQKRQGGGFGGI 265
>gi|21355677|ref|NP_651291.1| CG5808 [Drosophila melanogaster]
gi|4972682|gb|AAD34736.1| unknown [Drosophila melanogaster]
gi|7301211|gb|AAF56342.1| CG5808 [Drosophila melanogaster]
gi|220943598|gb|ACL84342.1| CG5808-PA [synthetic construct]
gi|220953568|gb|ACL89327.1| CG5808-PA [synthetic construct]
Length = 653
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 49/318 (15%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTDGMTAEEMQEMLAEREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLK--------HSGREDNERE 218
ID RR+ VD +S + W R G G+ G R NL+ ++GR E
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDH 362
Query: 219 RERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERK-----RRTSRSRSRDRRRR 273
+ER R E R R S +R + RE+R ER +R +RS+ +D +
Sbjct: 363 KERNRTE--------DFRNRMSSAERRKAREQRHQEQSERDVRKNLQRRTRSKEKDEKSV 414
Query: 274 RSRERIRDDDIEEVEFRPKDRSDR--DRDRDRKRRR-------------ERENSEDRNER 318
++ +++ + E R ++R+++ R RD RR + R R
Sbjct: 415 YRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRRYSRSRDREERRPSRPRDQLGRRSR 474
Query: 319 KRDRKERRKERERNNEER 336
RD+KERR+ R R ER
Sbjct: 475 SRDQKERRRSRPREQNER 492
>gi|260805176|ref|XP_002597463.1| hypothetical protein BRAFLDRAFT_122620 [Branchiostoma floridae]
gi|229282728|gb|EEN53475.1| hypothetical protein BRAFLDRAFT_122620 [Branchiostoma floridae]
Length = 366
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 56/60 (93%)
Query: 158 SAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNER 217
+AYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTR+GGP+VN+KHSGRED R
Sbjct: 43 AAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRKGGPEVNVKHSGREDPTR 102
>gi|195504667|ref|XP_002099177.1| GE10772 [Drosophila yakuba]
gi|194185278|gb|EDW98889.1| GE10772 [Drosophila yakuba]
Length = 655
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTDGMTAEELQEMLAEREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGG--------TRRGGPDVNLKHSGREDNERE 218
ID RR+ VD +S + W R G G+ G R D ++GR E
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGVVGDYGKLDFDNLRDNKDRRKPNNGRSRREDH 362
Query: 219 RERYRLERERELAGGPPRARSGSNDRERERERRRSRSRER-KRRTSRSRSRDR-RRRRSR 276
+E R E PR R S +R + RE+R ER R+ R RSR R ++ ++R
Sbjct: 363 KEDKRAE--------DPRHRMSSAERRKAREQRHQEQSERDDRKNVRGRSRSREKQEQNR 414
Query: 277 ERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERENSEDRNER 318
R R+ V ++ SDR+R+R+ + R R+ + R+ +
Sbjct: 415 SRSRNWQNGSV----REYSDRERNRNERSSRSRDTTHRRHSK 452
>gi|825727|emb|CAA30303.1| hU1-70K protein (286 AA) [Homo sapiens]
Length = 285
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 59/66 (89%)
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
+++AYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 5 VYAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 64
Query: 216 ERERER 221
R ER
Sbjct: 65 SRYDER 70
>gi|242824516|ref|XP_002488274.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218713195|gb|EED12620.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER E A L E+ P A + P + LF+ ++N T + L
Sbjct: 213 EEAMEKLRRER-EARAQALTLEMV----GDLPFAEVKPPENVLFVCKLNPVTQDEDLHLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER-- 179
F +GPI ++ +K TG YAFIE+E+++D AY +G ID R+ VD +
Sbjct: 268 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDFSQSV 327
Query: 180 SRTVKGW----LPRRLGGGLGGT 198
S+ W + +R GGG GG
Sbjct: 328 SKLSDTWRQATVQKRQGGGFGGI 350
>gi|448089233|ref|XP_004196749.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|448093471|ref|XP_004197780.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359378171|emb|CCE84430.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359379202|emb|CCE83399.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 40/218 (18%)
Query: 2 TQFLPPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVET 61
T+ P N+ LFA + P Y PP++ P E+KT +G++++ + ++ E
Sbjct: 5 TEKYPANIQKLFALKPPHVYKPPLDHPPEERKTCHITGLSSWRDVYKQHCSELQIQASEV 64
Query: 62 R-------------------EERLERRRRERAE-QVAYKLEQEIALWDPNSFPNATMDPF 101
R +E +R+ RE + ++ K EQE+ DP+
Sbjct: 65 RPETQQEQQKRRREERRKQIQESHDRQLREWNDVELLKKQEQEL-----------MKDPY 113
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
KT+F+AR++Y +E + + YG I I ++ ++ G+ RGY F+ +E E D + K
Sbjct: 114 KTVFLARLDYSLTELDISKHVSKYGVIDSIRIIRDR-EGRSRGYGFVAFERESDAKNCVK 172
Query: 162 HA--DGKKID------GRRVLVDVERSRTVKGWLPRRL 191
G KI R +LVD+ER R V+ W PRRL
Sbjct: 173 ELAPTGLKIPVPDKTPTRTILVDIERGRLVRNWKPRRL 210
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 5 LPPN----LLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTR-- 58
+PP ++ LF R + +L +LP + + +GI++ L F +D PP
Sbjct: 1 MPPKFSEEIIQLFRARPKLKFL----ELPEKPQPQQLTGISSVL-PFIKREDLPPLESEP 55
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
+ +++ RR+++ E+ K+ + ++P + T + TLF++ + + +E ++
Sbjct: 56 LLPIDQKHLVRRKQKNEENNQKIAEMKQRYNPRANKACTGNANNTLFVSGLPKEVTEQEI 115
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
EF +G +K + +V + T + R Y F+EYE E +A H D K + +LVD E
Sbjct: 116 VYEFNPFGRVKTVNLVRDPKTNEQRSYCFVEYETEAGFRNALNHKD-KFFIKKPLLVDFE 174
Query: 179 RSRTVKGWLP 188
R+RT+ W+P
Sbjct: 175 RARTIPNWIP 184
>gi|212546053|ref|XP_002153180.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064700|gb|EEA18795.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 454
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E+L R R RA+ + ++ ++ D P LF+ ++N T + L F
Sbjct: 217 EQLRREREARAQALTLEMVGDLPFAD-------VKPPENVLFVCKLNPVTQDEDLHLIFS 269
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--SR 181
+GPI ++ +K TG YAFIE+E+++D AY +G ID R+ VD + S+
Sbjct: 270 RFGPILSCEVIRDKKTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDFSQSVSK 329
Query: 182 TVKGW----LPRRLGGGLGGT 198
W + +R GGG GG
Sbjct: 330 LSDTWRQATVQKRQGGGFGGI 350
>gi|169782058|ref|XP_001825492.1| peptidylprolyl isomerase [Aspergillus oryzae RIB40]
gi|93140623|sp|Q2U256.1|PPIL4_ASPOR RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|83774234|dbj|BAE64359.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868072|gb|EIT77295.1| putative peptidyl prolyl cis-trans isomerase [Aspergillus oryzae
3.042]
Length = 461
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER + Q + L P A + P + LF+ ++N T + L
Sbjct: 213 EESMEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLHLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER-- 179
F +G I ++ +K TG YAFIE+E+++D AY G ID R+ VD +
Sbjct: 268 FSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 327
Query: 180 SRTVKGW----LPRRLG--GGLGGTRRGGPDVNLKHSGREDNERERER-YRLERERELAG 232
S+ + W + +R G GG GG + S DN RE+E Y L ++
Sbjct: 328 SKLSESWRNATISKRSGQRGGFGGVASLEKKRQYRAS---DNAREKENDYTLVFDKGDKA 384
Query: 233 GPPRARSGSNDRERERERRRSRS--RERKRRTSRSRSRDRRRRRSRER 278
R+ S S R R+RR SRS R+ R R R DR RS R
Sbjct: 385 PRRRSYSRSPQRSSNRDRRASRSPRRDSYRDPYRRRPGDRSHSRSPAR 432
>gi|5912017|emb|CAB55969.1| hypothetical protein [Homo sapiens]
gi|119572830|gb|EAW52445.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_a [Homo sapiens]
Length = 341
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 58/66 (87%)
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
+ +AYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 61 VTAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 120
Query: 216 ERERER 221
R ER
Sbjct: 121 SRYDER 126
>gi|170583877|ref|XP_001896769.1| hypothetical protein Bm1_26580 [Brugia malayi]
gi|158595927|gb|EDP34383.1| hypothetical protein Bm1_26580 [Brugia malayi]
Length = 175
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRR 200
AYK ADG KIDGRRV+VD ER RT K WLPRRLGGG G TRR
Sbjct: 31 AYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTRR 72
>gi|407923799|gb|EKG16862.1| hypothetical protein MPH_05843 [Macrophomina phaseolina MS6]
Length = 343
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 13/127 (10%)
Query: 39 GIAAFLNEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM 98
G+ +L ++ +D PT E+ +R +R ++E+ E++ L + +A + P PN
Sbjct: 5 GVGKYLQALKEYEDNYEPT--ESWLQRKDRLKQEKKEKLEKTLTEGVANFKPAEDPNVRG 62
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKP---------RGYAFIE 149
DPF+TLF+AR++YDT L REF +GPI++I +VH+ T +P RGYAF+
Sbjct: 63 DPFRTLFVARLSYDTEVKDLEREFGRFGPIERIRVVHD--TTQPEDAPAKKKNRGYAFVV 120
Query: 150 YEHERDM 156
+E E+DM
Sbjct: 121 FEREKDM 127
>gi|307109660|gb|EFN57897.1| hypothetical protein CHLNCDRAFT_141933 [Chlorella variabilis]
Length = 505
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
KT+++ ++ YDT E +R+ FE YG + + ++++K TG+ +G+ F+ +E +RD A
Sbjct: 32 KTIYVGQLRYDTDERTVRKWFEAYGTVVTVKLIYDKETGRSKGFGFVSFEDDRDARDALN 91
Query: 162 HADGKKIDGRRVLVDV 177
A G+ +DG + V++
Sbjct: 92 DAGGRDLDGAAIKVNI 107
>gi|119489203|ref|XP_001262853.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119411011|gb|EAW20956.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 462
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 114/251 (45%), Gaps = 35/251 (13%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRREF 122
E+L R R RA+ + ++ ++ P A + P + LF+ ++N T + L+ F
Sbjct: 217 EKLRREREARAQALTLEMVGDL--------PFAEVKPPENVLFVCKLNPVTQDEDLQLIF 268
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--S 180
+GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD + S
Sbjct: 269 SRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSVS 328
Query: 181 RTVKGWLPRRLG-----GGLGGTRRGGPDVNLKHSGRE-DNERERERYRLERERELAGGP 234
+ + W + GG GG ++ K R DN RER+ Y + ++
Sbjct: 329 KLSESWRNATISKRSQRGGFGGV----AELEKKRQYRATDNVRERDDYGMVFDKG----- 379
Query: 235 PRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDR 294
AR RER R RS R R+ SRS RD R R R R + R R
Sbjct: 380 -EARRRPASRERRYSRSPKRSSYRDRKDSRSPRRDSHRNRYRGR--------SDSRSPRR 430
Query: 295 SDRDRDRDRKR 305
D RDR+R+R
Sbjct: 431 EDSYRDRNRER 441
>gi|444318251|ref|XP_004179783.1| hypothetical protein TBLA_0C04680 [Tetrapisispora blattae CBS 6284]
gi|387512824|emb|CCH60264.1| hypothetical protein TBLA_0C04680 [Tetrapisispora blattae CBS 6284]
Length = 371
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 80 KLEQEIALWDPNSFPNA-TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHN-- 136
KLE ++ W+P+ PN DP+KT+F+ R+ YD +E +L++ F +G I KI +V +
Sbjct: 95 KLESYLSEWNPDEDPNIKGTDPYKTIFVGRLPYDITEIELQKIFSKFGKIDKIRIVKDNH 154
Query: 137 -------KV-TGKPRGYAFIEYEHERDMHSAYKHAD---GKKIDGRRVLVDVERSRTVKG 185
K+ K +GYAFI + A + G I+ R +VD+ERSRT K
Sbjct: 155 HRDENTAKIPMNKSKGYAFIVFNDASSSKMATREIGVHRGLLINNRICIVDIERSRTFKY 214
Query: 186 WLP 188
+ P
Sbjct: 215 FKP 217
>gi|238498916|ref|XP_002380693.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Aspergillus flavus NRRL3357]
gi|220693967|gb|EED50312.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Aspergillus flavus NRRL3357]
Length = 467
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER + Q + L P A + P + LF+ ++N T + L
Sbjct: 213 EESMEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLHLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER-- 179
F +G I ++ +K TG YAFIE+E+++D AY G ID R+ VD +
Sbjct: 268 FSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 327
Query: 180 ------SRTVKGW----LPRRLG--GGLGGTRRGGPDVNLKHSGREDNERERER-YRLER 226
S+ + W + +R G GG GG + S DN RE+E Y L
Sbjct: 328 SSTILVSKLSESWRNATISKRSGQRGGFGGVASLEKKRQYRAS---DNAREKENDYTLVF 384
Query: 227 ERELAGGPPRARSGSNDRERERERRRSRS--RERKRRTSRSRSRDRRRRRSRER 278
++ R+ S S R R+RR SRS R+ R R R DR RS R
Sbjct: 385 DKGDKAPRRRSYSRSPQRSSNRDRRASRSPRRDSYRDPYRRRPGDRSHSRSPAR 438
>gi|193786989|dbj|BAG51812.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 57/66 (86%)
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
+ +AYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG DVN++HSGR+D
Sbjct: 61 VTAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDT 120
Query: 216 ERERER 221
ER
Sbjct: 121 SPYDER 126
>gi|403374574|gb|EJY87244.1| Peptidylprolyl isomerase (Cyclophilin)-like 4 [Oxytricha trifallax]
Length = 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 30/181 (16%)
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A ++P K LF+ ++N T + LR F +GPIK +V + TG YAFIE+E
Sbjct: 183 LPDADIEPPKNVLFVCKLNPVTQDGDLRLIFSRFGPIKCCEIVRDWKTGDSLQYAFIEFE 242
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
+E AY +G ID RR+ +D +S K W R R+ LK +
Sbjct: 243 NEESCIEAYSRMEGVAIDERRIHIDFSQS-VAKEWNQYR--------RKM-----LKTAA 288
Query: 212 REDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRR 271
D E+E+ R E+ER++ SN + ++RE RK S SRSRD R
Sbjct: 289 --DQILEQEQARKEKERQVYN------LFSNYKNKDREG-------RKDELSGSRSRDHR 333
Query: 272 R 272
R
Sbjct: 334 R 334
>gi|194745953|ref|XP_001955449.1| GF18772 [Drosophila ananassae]
gi|190628486|gb|EDV44010.1| GF18772 [Drosophila ananassae]
Length = 621
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMD-PFKTLFI 106
ED DT T E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTGGKTLEEMQEMLAEREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDV-NLKHS----------GREDN 215
ID RR+ VD +S + W R G G+ G G D NL+ + GR DN
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGVVGA-DGKLDFDNLRDNNDRKDYNNGRGRSDN 361
Query: 216 ERERERY 222
RE ++Y
Sbjct: 362 HRESKKY 368
>gi|195037156|ref|XP_001990030.1| GH18460 [Drosophila grimshawi]
gi|193894226|gb|EDV93092.1| GH18460 [Drosophila grimshawi]
Length = 582
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 24/238 (10%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E ER E +A EI P+A M P LF+
Sbjct: 195 EDIDDTNGKTMEEMQEMLAER------EAIARATILEIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVN------LKHSGREDNERERE 220
ID RR+ VD +S W R G G+ G G D N ++GR++ R +
Sbjct: 305 LIDDRRIHVDFSQSVARVTW--RGKGRGVIGA-DGKLDFNNLRDNGANNNGRKNESRTNK 361
Query: 221 RYRLEREREL-AGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRE 277
R R E R++ R+R GS R R R +E++ R RSR+ +R+R +SRE
Sbjct: 362 RGRNEGRRDVRKPEEQRSRMGS---AERRRARELRHQEQEGREDRSRNHNRQRSKSRE 416
>gi|70982374|ref|XP_746715.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Aspergillus
fumigatus Af293]
gi|74666620|sp|Q4WAQ9.1|PPIL4_ASPFU RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|66844339|gb|EAL84677.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Aspergillus fumigatus Af293]
gi|159123042|gb|EDP48162.1| RNA binding protein, putative [Aspergillus fumigatus A1163]
Length = 459
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER + Q + L P A + P + LF+ ++N T + L+
Sbjct: 213 EEAMEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLQLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER-- 179
F +GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD +
Sbjct: 268 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 327
Query: 180 SRTVKGWLPRRLG-----GGLGGT 198
S+ + W + GG GG
Sbjct: 328 SKLSESWRNATISKRSQRGGFGGV 351
>gi|195107957|ref|XP_001998560.1| GI24038 [Drosophila mojavensis]
gi|193915154|gb|EDW14021.1| GI24038 [Drosophila mojavensis]
Length = 577
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED +T T E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDETNGKTMEEMQEMLAEREAKARATIL------EIV----GDLPDAEMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHS-GREDNERERERYRLE 225
ID RR+ VD +S + W R G G+ G NL+ S G++ + R+R + +
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGVVGDGSQLDFNNLRESNGKKHESKPRKRGQED 362
Query: 226 RERELAGGPPRARSGSNDRERERERRR----SRSRERKRRTSRSRSRDRRRRRSRE 277
R + R R+ +RE E RR R RE++ R R R + +R RSRE
Sbjct: 363 RRGQGDRRIDRKRNDEQNREITSEERRKAREQRHREQREREDRGRRNNTQRSRSRE 418
>gi|296811732|ref|XP_002846204.1| peptidyl-prolyl cis-trans isomerase-like 4 [Arthroderma otae CBS
113480]
gi|238843592|gb|EEQ33254.1| peptidyl-prolyl cis-trans isomerase-like 4 [Arthroderma otae CBS
113480]
Length = 478
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 47 FEDPKDTPPPTRV---------------ETREERLERRRRERAEQVAYKLEQEIALWDPN 91
++P ++P PT+ E EE LER RRER Q Q + L
Sbjct: 209 LQEPPESPLPTKAQLATVMIADDEDLDQEVDEEALERMRREREAQA-----QALTLEMVG 263
Query: 92 SFPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEY 150
P A + P + LF+ ++N T + L F +G I ++ +K TG YAFIE+
Sbjct: 264 DLPFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGKILSCEVIRDKKTGDSLQYAFIEF 323
Query: 151 EHERDMHSAYKHADGKKIDGRRVLVDVER--SRTVKGW----LPRRLG--GGLGGT 198
E ++D AY G ID R+ VD + S+ W +R G GG GG
Sbjct: 324 EDQKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRTATNAKRSGQRGGFGGI 379
>gi|157114772|ref|XP_001652414.1| splicing factor, putative [Aedes aegypti]
gi|108883567|gb|EAT47792.1| AAEL001131-PA [Aedes aegypti]
Length = 214
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP T+F+ R+ E++ R+ FE +G I + +V + VT RGY F+E+ +
Sbjct: 68 DPLCTIFVGRLAPSVDENQFRKLFERFGTIVRCRLVRDVVTELSRGYGFVEFSERKSALR 127
Query: 159 AYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
A G+ ++G+ +LVD E R +KGW PR
Sbjct: 128 AIDEMHGRNLEGKELLVDEEWERRLKGWKPR 158
>gi|195388776|ref|XP_002053055.1| GJ23668 [Drosophila virilis]
gi|194151141|gb|EDW66575.1| GJ23668 [Drosophila virilis]
Length = 530
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 119/293 (40%), Gaps = 51/293 (17%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT + E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTNGKSMEEMQEMLAEREAKARATIL------EIV----GDLPDAEMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLER 226
ID RR+ VD +S + W R G G+ G GR D +ER
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGIIGA-----------DGRLDFNNLKER----- 346
Query: 227 ERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEE 286
G S + + R+R+ ERK RTS + R R +E+
Sbjct: 347 -----NGSGNISQPSKMDSTQGRKDRNRNDERKNRTSLEERKKARELRHQEQ-------- 393
Query: 287 VEFRPKDRSDRDRDRDRKRRRERENSEDRNERKRDRKERRKERERNNEEREEK 339
KDR R RD+ +R R R D N R + + E R N E+ K
Sbjct: 394 -----KDRDKRARDQYVQRSRSR----DPNIRPTFKSQENPESHRRNAEKSYK 437
>gi|158297018|ref|XP_317325.4| AGAP008136-PA [Anopheles gambiae str. PEST]
gi|157014993|gb|EAA12690.4| AGAP008136-PA [Anopheles gambiae str. PEST]
Length = 676
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 47 FEDPKDTPPPTRVET-REERLERRRRERAEQV---AYKLEQEIA--------------LW 88
FEDP+ P+R + ERL+ R E++ K EQEIA L
Sbjct: 166 FEDPRGFREPSRSPSPSAERLQGGRIAADEEIDDLGGKTEQEIAEMIAEREAKARATILE 225
Query: 89 DPNSFPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
P+A + P + LF+ ++N T++ L+ F +G I ++ +K+TG YAF
Sbjct: 226 IVGDIPDADIAPPENVLFVCKLNPVTTDDDLQIIFSRFGKIVGCEVIRDKLTGDSLQYAF 285
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
IE+E+++ AY D ID RR+ VD +S + W
Sbjct: 286 IEFENQKSCEDAYFKMDNVLIDDRRIHVDFSQSVSKIKW 324
>gi|219115463|ref|XP_002178527.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410262|gb|EEC50192.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 638
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 131/308 (42%), Gaps = 60/308 (19%)
Query: 55 PPTRVETREERL---ERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVN 110
P +++E EE L E RRRE Q + + L P+A + P LFI ++N
Sbjct: 264 PISQIEPDEEGLTEVELRRREEQAQKQEDRGRAVVLEMLGDLPDADIKAPENVLFICKLN 323
Query: 111 YDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 170
T + L F + P K+ ++ ++ TGK YAF E+E ++ AY + +D
Sbjct: 324 PITQDEDLELIFSRFDPTVKVEIIRDQSTGKSLQYAFAEFEEKQQAVEAYFKMNNALVDD 383
Query: 171 RRVLVDVERSRTVKGW-----LPRRLGGGLGGTRRG----GPDVNLKHSGREDNERERER 221
RR+ VD +S + K W R GG GGT + GP V+ GR +
Sbjct: 384 RRIKVDFSQSVS-KIWNKYTQKMRMPTGGPGGTFQNSASTGPGVSRGRGGRHSCQ----- 437
Query: 222 YRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRD 281
GG + R ++DR R E RS R S +RS D R R SR
Sbjct: 438 ----------GGNWQVR--NDDRHRPSE----RSDMRSYYGSPNRSNDDRHRDSR----- 476
Query: 282 DDIEEVEFRPKDRSDRDRDRDRKRRRERENSED-RNERKRDRK-----------ERRKER 329
R D D RD + +RER+ S+D + K DR +RRK
Sbjct: 477 --------RSADARKMDWQRDHRDKRERQRSDDPSSHSKGDRNGSRHRGRAGDGDRRKRD 528
Query: 330 ERNNEERE 337
ER +E+RE
Sbjct: 529 ERTHEDRE 536
>gi|189197207|ref|XP_001934941.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980889|gb|EDU47515.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 509
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRREF 122
E LE+ RRER + Q + L P A + P + LF+ ++N T + L F
Sbjct: 249 EALEKIRREREARA-----QALTLEMVGDLPFAEVAPPENVLFVCKLNPVTQDEDLELIF 303
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS-- 180
+G I ++ +K TG YAFIEY +++D AY DG ID R+ VD +S
Sbjct: 304 SRFGKILSCEVIRDKKTGDSLQYAFIEYTNQKDCEQAYFKMDGVLIDDHRIHVDFSQSVS 363
Query: 181 ------RTVKGWLPRRLGGGLGGT 198
R V RR GG GG
Sbjct: 364 KIADDWRDVTNKKRRRAAGGFGGI 387
>gi|326483936|gb|EGE07946.1| peptidyl-prolyl cis-trans isomerase-like 4 [Trichophyton equinum
CBS 127.97]
Length = 454
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 47 FEDPKDTPPPTRV---------------ETREERLERRRRERAEQVAYKLEQEIALWDPN 91
++P ++P PT+ E EE LER RRER Q Q + L
Sbjct: 182 LQEPPESPLPTKAQLATVMIADDEDLDQEVDEEALERIRREREAQA-----QALTLEMVG 236
Query: 92 SFPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEY 150
P A + P + LF+ ++N T + L F +G I ++ +K TG YAFIE+
Sbjct: 237 DLPFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGRILSCEVIRDKKTGDSLQYAFIEF 296
Query: 151 EHERDMHSAYKHADGKKIDGRRVLVDVERS 180
E ++D AY G ID R+ VD +S
Sbjct: 297 EDQKDCEQAYFKMQGVLIDDHRIHVDFSQS 326
>gi|330922608|ref|XP_003299903.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
gi|311326217|gb|EFQ91998.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRREF 122
E LE+ RRER + Q + L P A + P + LF+ ++N T + L F
Sbjct: 216 EALEKIRREREARA-----QALTLEMVGDLPFAEVAPPENVLFVCKLNPVTQDEDLELIF 270
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS-- 180
+G I ++ +K TG YAFIEY +++D AY DG ID R+ VD +S
Sbjct: 271 SRFGKILSCEVIRDKKTGDSLQYAFIEYTNQKDCEQAYFKMDGVLIDDHRIHVDFSQSVS 330
Query: 181 ------RTVKGWLPRRLGGGLGGT 198
R V RR GG GG
Sbjct: 331 KIADDWRDVTNKKRRRAAGGFGGI 354
>gi|195452564|ref|XP_002073409.1| GK13166 [Drosophila willistoni]
gi|194169494|gb|EDW84395.1| GK13166 [Drosophila willistoni]
Length = 594
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 57 TRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSES 116
T+ +T EE LE + A+ A LE L D P P LFI ++N T++
Sbjct: 200 TQGKTAEEMLEILAEKEAKARATILEIVGDLPDAEMAP-----PENVLFICKLNPVTTDD 254
Query: 117 KLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
L F +G +K ++ ++ TG YAF+E++ ++ +AY D +D RR+ VD
Sbjct: 255 DLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFDEQKSCEAAYFKMDNVLVDDRRIHVD 314
Query: 177 VERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG-REDNERERERYRLERERELAGGPP 235
+S W R G G+ GP+ L RE+N R ++R++E A
Sbjct: 315 FSQSVAKIKW--RGKGRGI-----EGPEGRLDFDNLRENNGHNNRRRGMDRDQENA---- 363
Query: 236 RARSGSNDRERERERRRSRSRERKRR 261
R R S +R + RE+R ER+++
Sbjct: 364 RNRMSSAERRKAREQRHQEQSEREKQ 389
>gi|170038581|ref|XP_001847127.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
gi|167882326|gb|EDS45709.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
Length = 210
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P A DP T+F+ R+ + E ++R F G + + +V + VTG RGYAF+E+
Sbjct: 57 PKAEGDPRHTVFVGRLEHCVDEERVRELFGRCGTVVRCRVVRDVVTGVSRGYAFVEFSRR 116
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPR 189
+ + A K GK ++G+ +LVD E RT+KGW PR
Sbjct: 117 KYVERALKELHGKTVEGKEILVDEEVGRTLKGWKPR 152
>gi|290992316|ref|XP_002678780.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Naegleria
gruberi]
gi|284092394|gb|EFC46036.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Naegleria
gruberi]
Length = 492
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 50 PKDTPPPTR----VETREERL-------ERRRRERAEQVAYK----LEQEIALWDPNSFP 94
P +P P R +E +E+L E +R + E A K + I L P
Sbjct: 211 PPSSPLPIRDDEIIEISKEKLTLEEKPTENKRLSKEEYEAKKEREAKSKAIVLEMIGDLP 270
Query: 95 NATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
+A + P LF+ R+N TSE LR F YG I K +V N+ TGK + YAFIE+E
Sbjct: 271 DADVKPPDSVLFVCRLNPITSEKSLRTIFLQYGNIVKCEIVKNRKTGKSKTYAFIEFEDA 330
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERS 180
A+ ++G ID ++ VD +S
Sbjct: 331 ESCERAFLKSEGLVIDDHKIHVDFSQS 357
>gi|449277846|gb|EMC85868.1| Peptidyl-prolyl cis-trans isomerase-like 4, partial [Columba livia]
Length = 478
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 85 IALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
I L P+A + P LF+ ++N T++ L F +GPIK ++ + TG+
Sbjct: 220 ILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTGESL 279
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+E E D AY D ID RR+ VD +S W
Sbjct: 280 CYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKW 322
>gi|255544660|ref|XP_002513391.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
gi|223547299|gb|EEF48794.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
Length = 587
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 85 IALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
+ L P+A M P LF+ ++N T + L F +G + ++ + TG
Sbjct: 236 VVLESIGDIPDAEMKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSL 295
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLP-RRLGGGLGGTR--- 199
YAFIE+E + AY D ID RR+ VD +S K W RR GG +G R
Sbjct: 296 CYAFIEFETKESCEQAYFKMDNALIDDRRIHVDFSQS-VAKQWAEYRRRGGQMGKERGCF 354
Query: 200 ------------RGGP-------------DVNLKHSGREDNERERERYRLERERELAGGP 234
GGP D N++H G+ ++ RY + + + P
Sbjct: 355 KCGAPDHTAKDCTGGPPTKQLQPPKYVLKDDNMQHGGKNNS-----RYEMVFDGDTPESP 409
Query: 235 -PRARSGSNDRERERERRRSR------SRERKRRTSRSRSRDRRR 272
R+G +D ERE+ RRS + E+K + R RDR R
Sbjct: 410 RQEKRNGRHDPEREKMHRRSLEDLKHGAEEKKYQGDGHRQRDRNR 454
>gi|67904216|ref|XP_682364.1| hypothetical protein AN9095.2 [Aspergillus nidulans FGSC A4]
gi|74592360|sp|Q5ARI5.1|PPIL4_EMENI RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|40742738|gb|EAA61928.1| hypothetical protein AN9095.2 [Aspergillus nidulans FGSC A4]
gi|259485493|tpe|CBF82562.1| TPA: Peptidyl-prolyl cis-trans isomerase-like 4
(PPIase)(Rotamase)(EC 5.2.1.8)
[Source:UniProtKB/Swiss-Prot;Acc:Q5ARI5] [Aspergillus
nidulans FGSC A4]
Length = 461
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKL 118
E E+L R R RA+ + ++ ++ P A + P + LF+ ++N T + L
Sbjct: 213 EASMEKLRREREARAQALTLEMVGDL--------PFAEVKPPENVLFVCKLNPVTQDEDL 264
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G I ++ +K TG YAFIE+E ++D AY G ID R+ VD
Sbjct: 265 ELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKMQGVLIDDHRIHVDFS 324
Query: 179 RS----------RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERER 228
+S TVK +R GG GG G + ++ E N RER Y + ++
Sbjct: 325 QSVSKLSESWRDATVKKRSAQR--GGFGGV--AGLEKKRQYRASE-NARERANYNMVFDK 379
Query: 229 ELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVE 288
N R RER SRS +R R SR RR R R D
Sbjct: 380 N-----------DNRRSAPRERSYSRSPQRNNYRDRRDSRSPRRDSYRSRYGD------- 421
Query: 289 FRPKDRSDRDRDRDRKRRREREN 311
R RS RDRDR R +N
Sbjct: 422 -RSNSRSPPLRDRDRIRTDYYDN 443
>gi|451846305|gb|EMD59615.1| hypothetical protein COCSADRAFT_126954 [Cochliobolus sativus
ND90Pr]
Length = 481
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKL 118
E E LE+ RRER E A L E+ P A + P + LF+ ++N T + L
Sbjct: 216 ENDPEALEKVRRER-EARAQALTLEMV----GDLPFAEVAPPENVLFVCKLNPVTQDEDL 270
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G I ++ +K TG YAFIEY +++D AY DG ID R+ VD
Sbjct: 271 ELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYANQKDCEQAYFKMDGVLIDDHRIHVDFS 330
Query: 179 RS--------RTVKGWLPRRLGGGLGGT 198
+S R V RR GG GG
Sbjct: 331 QSVSKIADDWRDVTNKKRRRAAGGFGGI 358
>gi|281206242|gb|EFA80431.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Polysphondylium pallidum PN500]
Length = 539
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 45 NEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTL 104
N FE +D T+ +T+EE E + A + LE L D + P P L
Sbjct: 198 NRFEADEDIDEDTKGKTKEEIEEELNAKSARGRSELLEMLGVLPDADIKP-----PENVL 252
Query: 105 FIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHAD 164
F+ ++N DTS L F +G I+ ++ + VT YAF+EYE ++ +AY +
Sbjct: 253 FVCKLNPDTSSEDLELCFSSFGNIRSCEVIRDPVTNDSLCYAFVEYETKKQCETAYSKME 312
Query: 165 GKKIDGRRVLVDVERSRT-VK-GWLPRRLGGGLGGTRRGGPDVNLKH 209
ID RR+ VD +S VK G+ ++ GG R VN +H
Sbjct: 313 NALIDERRIHVDFCQSIAKVKFGYGAKKFLS--GGKRINSSLVNPQH 357
>gi|451994412|gb|EMD86882.1| hypothetical protein COCHEDRAFT_1185111 [Cochliobolus
heterostrophus C5]
Length = 477
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPF-KTLFIARVNYDTSESKL 118
E E LE+ RRER E A L E+ P A + P LF+ ++N T + L
Sbjct: 212 ENDPEALEKIRRER-EARAQALTLEMV----GDLPFAEVAPPENVLFVCKLNPVTQDEDL 266
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G I ++ +K TG YAFIEY +++D AY DG ID R+ VD
Sbjct: 267 ELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYANQKDCEQAYFKMDGVLIDDHRIHVDFS 326
Query: 179 RS--------RTVKGWLPRRLGGGLGGT 198
+S R V RR GG GG
Sbjct: 327 QSVSKIADDWRDVTNKKRRRAAGGFGGI 354
>gi|126310681|ref|XP_001370869.1| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 4
[Monodelphis domestica]
Length = 486
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A + P LF+ ++N T++ L F +GPIK ++ + TG+
Sbjct: 220 QAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTGE 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+E E D A+ D ID RR+ VD +S W
Sbjct: 280 SLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKW 324
>gi|258576831|ref|XP_002542597.1| hypothetical protein UREG_02113 [Uncinocarpus reesii 1704]
gi|237902863|gb|EEP77264.1| hypothetical protein UREG_02113 [Uncinocarpus reesii 1704]
Length = 443
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE LE+ RRER + Q + L P A + P + LF+ ++N T + L
Sbjct: 213 EESLEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLNLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
F +GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD +S
Sbjct: 268 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 327
Query: 182 T 182
+
Sbjct: 328 S 328
>gi|148236671|ref|NP_001080216.1| transformer 2 alpha homolog [Xenopus laevis]
gi|27924195|gb|AAH44990.1| Tra2a-prov protein [Xenopus laevis]
Length = 276
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
A DP + + ++ T+E +R F YGP+ + +V+++ TG+ RG+AF+ +E D
Sbjct: 106 ANPDPNLCIGVFGLSLYTTERDIREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIED 165
Query: 156 MHSAYKHADGKKIDGRRVLVD 176
A +HADG ++DGRR+ VD
Sbjct: 166 SREAMEHADGMELDGRRIRVD 186
>gi|195158659|ref|XP_002020203.1| GL13859 [Drosophila persimilis]
gi|194116972|gb|EDW39015.1| GL13859 [Drosophila persimilis]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E +R + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTDGMTMEEMQEMLADREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGR---EDNERERERYR 223
ID RR+ VD +S + W R G G+ G NL+ + +N R R+R R
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW--RGKGRGVEGVDGKLDFDNLRDNNERRPHNNGRGRDRDR 362
Query: 224 LERERELA-GGPPRARSGSNDRERERERRRSRSRE 257
+ R+ PR+R S +R + RE+R E
Sbjct: 363 TDEHRDRKRPDDPRSRMSSAERRKAREQRHQEQNE 397
>gi|396481240|ref|XP_003841191.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
gi|312217765|emb|CBX97712.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
Length = 478
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKL 118
E E LE+ RRER E A L E+ P A + P + LF+ ++N T + L
Sbjct: 216 ENDPEALEKVRRER-EARAQALTLEMV----GDLPFAEVAPPENVLFVCKLNPVTQDEDL 270
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G I ++ +K TG YAFIEY +++D AY DG ID R+ VD
Sbjct: 271 ELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYANQKDCEQAYFKMDGVLIDDHRIHVDFS 330
Query: 179 R--SRTVKGWLP------RRLGGGLGGT 198
+ S+ W +R GG GG
Sbjct: 331 QSVSKIADDWRDDANKKRKRAAGGFGGI 358
>gi|359484387|ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
Length = 399
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 97 TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
T+D ++++ + Y+ +E +R+ F +YG I + +++ + G + Y F+ + + R
Sbjct: 54 TIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRSA 112
Query: 157 HSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNE 216
A +G+ IDGR V+V+ R+R GG + S R ++E
Sbjct: 113 IDAINDMNGRDIDGRIVVVNEVRTR-------------------GGRSNFGRESFRRNSE 153
Query: 217 RERERYRL-ERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRS 275
R + R +RER+ R + DR R+ +R R R ER R R+RDR R+
Sbjct: 154 RGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERGHERAR--DHDRTRDRFMDRN 211
Query: 276 RERIRD-DDIEEVEFRPKDRS-DRDRDRDRKRRRERENSEDRNERKRDRKERRKER 329
R++ RD +D E+ R D+ +RD D D R RE N+ D +++ D+ E K+R
Sbjct: 212 RDQDRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTND-HDKSGDKDEHSKKR 266
>gi|118088352|ref|XP_419663.2| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 4 [Gallus
gallus]
Length = 478
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 47 FEDPKDTPPPTRV-ETREERLERRRRERAEQV-------AYKLEQ----------EIALW 88
F+DP P P R E +E+L+ R E++ A ++E+ I L
Sbjct: 166 FDDPPGLPIPDRSPEPTKEQLDSGRIGADEEIDDMKGRSADEIEEVQAEKEAKTRAILLE 225
Query: 89 DPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
P+A + P LF+ ++N T++ L F +GPIK ++ + TG+ YAF
Sbjct: 226 MVGDLPDAEVKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTGESLCYAF 285
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
IE+E E D AY D ID RR+ VD +S W
Sbjct: 286 IEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKW 324
>gi|326915720|ref|XP_003204161.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Meleagris gallopavo]
Length = 481
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 47 FEDPKDTPPPTRV-ETREERLERRRRERAEQV-------AYKLEQ----------EIALW 88
F+DP P P R E +E+L+ R E++ A ++E+ I L
Sbjct: 169 FDDPPGLPIPDRSPEPTKEQLDSGRIGADEEIDDMKGRSADEIEEVQAEKEAKTRAILLE 228
Query: 89 DPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
P+A + P LF+ ++N T++ L F +GPIK ++ + TG+ YAF
Sbjct: 229 MVGDLPDAEVKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTGESLCYAF 288
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
IE+E E D AY D ID RR+ VD +S W
Sbjct: 289 IEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKW 327
>gi|260786062|ref|XP_002588078.1| hypothetical protein BRAFLDRAFT_114729 [Branchiostoma floridae]
gi|229273235|gb|EEN44089.1| hypothetical protein BRAFLDRAFT_114729 [Branchiostoma floridae]
Length = 478
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G IK ++ ++ TG YAF+E+E A
Sbjct: 240 PDNVLFVCKLNPVTQDDDLEVIFSRFGEIKCCEVIRDQKTGDSLCYAFVEFEKPEACEEA 299
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERER 219
Y D ID RR+ VD +S + K W +GGP N G ++
Sbjct: 300 YFKMDNVLIDDRRIHVDFSQSVS-KVW-------------KGGP--NAPKGG------QK 337
Query: 220 ERYRLERERELAGGPP--RARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRE 277
++ L+ + + AG + ++ E R + ++ RR S S DRR +
Sbjct: 338 SKFELKDKSKGAGTDVDNCVLKLFSFQDTENRSRHDKHKKTHRRDSSSSEDDRRHHKKHH 397
Query: 278 RIRDDDIEEVEFRPKDRSDRDRDRDRKRRREREN--SEDRNERKRDRKER 325
+ D + VE R +D S + DR K++ + N S+D +KRDR ER
Sbjct: 398 KKERDLDKTVERRVRDASSSEDDRRHKKKYHKHNRDSDDGCHKKRDRHER 447
>gi|242016767|ref|XP_002428900.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Pediculus
humanus corporis]
gi|212513682|gb|EEB16162.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Pediculus
humanus corporis]
Length = 177
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P T+F+ R++ +E L+ F+ YG IKK ++ + VTG + YAFIEYE E A
Sbjct: 48 PECTVFVGRLHPKVTEDDLKIVFKEYGRIKKCNVIKDIVTGGSKQYAFIEYEKESQADRA 107
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRL 191
Y+ I G ++VD E RT+K W PRRL
Sbjct: 108 YRRGHKALIRGLEIIVDREFGRTMKNWKPRRL 139
>gi|121709164|ref|XP_001272328.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119400477|gb|EAW10902.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 462
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 23/168 (13%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L+ F +G I ++ +K TG YAFIE+E+++D A
Sbjct: 246 PENVLFVCKLNPVTQDEDLQLIFSRFGQILSCEVIRDKRTGDSLQYAFIEFENQKDCEQA 305
Query: 160 YKHADGKKIDGRRVLVDVER--SRTVKGW----LPRRLG--GGLGGTRRGGPDVNLKHSG 211
Y G ID R+ VD + S+ + W + +R G GG GG ++ K
Sbjct: 306 YFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSGQRGGFGGVA----ELEKKRQY 361
Query: 212 RE-DNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRER 258
R DN R+R+ Y + ++ GGP R R RE + S+S ER
Sbjct: 362 RATDNARQRDDYGMVFDK---GGPKR-------RPASREPQYSQSPER 399
>gi|297738892|emb|CBI28137.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 26/237 (10%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
T+D ++++ + Y+ +E +R+ F +YG I + +++ + G + Y F+ + + R
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRS 59
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
A +G+ IDGR V+V+ R+R GG G + S R ++
Sbjct: 60 AIDAINDMNGRDIDGRIVVVNEVRTR--------------GGRSNFG-----RESFRRNS 100
Query: 216 ERERERYRL-ERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRR 274
ER + R +RER+ R + DR R+ +R R R ER R R+RDR R
Sbjct: 101 ERGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERGHERAR--DHDRTRDRFMDR 158
Query: 275 SRERIRD-DDIEEVEFRPKDRS-DRDRDRDRKRRRERENSEDRNERKRDRKERRKER 329
+R++ RD +D E+ R D+ +RD D D R RE N+ D +++ D+ E K+R
Sbjct: 159 NRDQDRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTND-HDKSGDKDEHSKKR 214
>gi|195331754|ref|XP_002032564.1| GM23461 [Drosophila sechellia]
gi|194121507|gb|EDW43550.1| GM23461 [Drosophila sechellia]
Length = 464
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E ER + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTDGMTAEEMQEMLAEREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGW 186
ID RR+ VD +S + W
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW 324
>gi|224047904|ref|XP_002196470.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4 [Taeniopygia
guttata]
Length = 479
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 47 FEDPKDTPPPTRV-----ETREERLER--------------RRRERAEQVAYKLEQE--- 84
+DP D PP V E +E+L+ R E E+V + E +
Sbjct: 162 LDDPFDDPPGLCVPDRSPEPTKEQLDSGRIGADEEIDDMKGRSAEEIEEVQAEKEAKTRA 221
Query: 85 IALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
I L P+A + P LF+ ++N T+ L F +GPIK ++ + TG+
Sbjct: 222 ILLEMVGDLPDADIKPPENVLFVCKLNPVTTGEDLEIIFSRFGPIKSCEVIRDWKTGESL 281
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+E E D AY D ID RR+ VD +S W
Sbjct: 282 CYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKW 324
>gi|395535114|ref|XP_003769577.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4 [Sarcophilus
harrisii]
Length = 486
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A + P LF+ ++N T++ L F +GPIK ++ + TG+
Sbjct: 220 QAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTGE 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+E E D A+ D ID RR+ VD +S W
Sbjct: 280 SLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKW 324
>gi|115385336|ref|XP_001209215.1| hypothetical protein ATEG_01850 [Aspergillus terreus NIH2624]
gi|114196907|gb|EAU38607.1| hypothetical protein ATEG_01850 [Aspergillus terreus NIH2624]
Length = 545
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER E A L E+ P A + P + LF+ ++N T + L
Sbjct: 301 EEAMEKLRRER-EARAQALTLEMV----GDLPFAEVKPPENVLFVCKLNPVTQDDDLHLI 355
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER-- 179
F +G I ++ +K TG YAFIE+E+++D AY G ID R+ VD +
Sbjct: 356 FSRFGKILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 415
Query: 180 SRTVKGW----LPRRLG--GGLGGT 198
S+ W + +R G GG GG
Sbjct: 416 SKLSDSWRNATISKRSGQRGGFGGV 440
>gi|239609788|gb|EEQ86775.1| peptidyl-prolyl cis-trans isomerase-like 4 [Ajellomyces
dermatitidis ER-3]
Length = 430
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER + Q + L P A + P + LF+ ++N T + L
Sbjct: 203 EEAVEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLHLI 257
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD +S
Sbjct: 258 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQS 316
>gi|52345542|ref|NP_001004819.1| transformer 2 alpha homolog [Xenopus (Silurana) tropicalis]
gi|49250512|gb|AAH74599.1| transformer-2 alpha [Xenopus (Silurana) tropicalis]
gi|89266999|emb|CAJ81300.1| transformer-2 alpha (tra2a) [Xenopus (Silurana) tropicalis]
Length = 287
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
A DP + + ++ T+E LR F YGP+ + +V+++ TG+ RG+AF+ +E D
Sbjct: 108 ANPDPNICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIED 167
Query: 156 MHSAYKHADGKKIDGRRVLVD 176
A +HA+G ++DGRR+ VD
Sbjct: 168 SREAMEHANGMELDGRRIRVD 188
>gi|432112802|gb|ELK35400.1| Peptidyl-prolyl cis-trans isomerase-like 4, partial [Myotis
davidii]
Length = 469
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 50 PKDTPPPTRVETREERL---------ERRRRERAEQVAYKLE---QEIALWDPNSFPNAT 97
P +P PTR + R+ + R E E++ + E Q I L P+A
Sbjct: 152 PDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDAD 211
Query: 98 MDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+ P LF+ ++N T++ L F +GPI+ ++ + TG+ YAFIE+E E D
Sbjct: 212 IKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDC 271
Query: 157 HSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
A+ D ID RR+ VD +S W
Sbjct: 272 EKAFFKMDNVLIDDRRIHVDFSQSVAKVKW 301
>gi|261199097|ref|XP_002625950.1| peptidyl-prolyl cis-trans isomerase-like 4 [Ajellomyces
dermatitidis SLH14081]
gi|239595102|gb|EEQ77683.1| peptidyl-prolyl cis-trans isomerase-like 4 [Ajellomyces
dermatitidis SLH14081]
Length = 440
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER + Q + L P A + P + LF+ ++N T + L
Sbjct: 213 EEAVEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLHLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
F +GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD +S
Sbjct: 268 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 327
Query: 182 T 182
+
Sbjct: 328 S 328
>gi|327353828|gb|EGE82685.1| RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 440
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRRE 121
EE +E+ RRER + Q + L P A + P + LF+ ++N T + L
Sbjct: 213 EEAVEKLRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTQDEDLHLI 267
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
F +GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD +S
Sbjct: 268 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSV 327
Query: 182 T 182
+
Sbjct: 328 S 328
>gi|198449749|ref|XP_002136956.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
gi|198130740|gb|EDY67514.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 48 EDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFI 106
ED DT T E +E +R + RA + EI P+A M P LF+
Sbjct: 195 EDIDDTDGMTMEEMQEMLADREAKARATIL------EIV----GDLPDADMAPPENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N T++ L F +G +K ++ ++ TG YAF+E+E ++ +AY D
Sbjct: 245 CKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKMDNV 304
Query: 167 KIDGRRVLVDVERSRTVKGW 186
ID RR+ VD +S + W
Sbjct: 305 LIDDRRIHVDFSQSVSKVTW 324
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L I ++ YDTS S +R +F+ YG IK + + + T +PRG+ F+E+ +D A K
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 163 ADGKKIDGRRVLVDV 177
+G +IDG R+ V V
Sbjct: 73 MNGSEIDGNRIEVFV 87
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 41 AAFLNEFEDPKDTPPPTRVETREERLERR-RRERAEQVAYKLEQEIALWDPNSFPNATMD 99
+ FL +P + P T+V+ E ER AE+V++ E + + W
Sbjct: 9 SCFLGSEPEPAEMNPLTKVKLINELNEREVELGVAEKVSWHNEYKDSAW----------- 57
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
+F+ + Y+ +E + F YG I I +V +K TGK +G+ F+ YE +R A
Sbjct: 58 ----IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLA 113
Query: 160 YKHADGKKIDGRRVLVD 176
+ +G KI GR + VD
Sbjct: 114 VDNFNGIKIKGRTIRVD 130
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
L + ++ T+E +LR F YGPI I +V++ +G+ RG+AF+ YE E D A
Sbjct: 116 CLGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSYESEEDAREAKDR 175
Query: 163 ADGKKIDGRRVLVD 176
+G +IDGRR+ VD
Sbjct: 176 TNGMEIDGRRIRVD 189
>gi|345305814|ref|XP_001506397.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Ornithorhynchus anatinus]
Length = 479
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 47 FEDPKDTPP----------PTRVETREERL---------ERRRRERAEQVAYKLE---QE 84
+DP D PP PT+ + R+ + + E E++ + E Q
Sbjct: 154 LDDPFDDPPGLPIPDRSPDPTKEQLNSGRIGADEEIDDFKGKSVEEVEEIMAEKEAKTQA 213
Query: 85 IALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
I L P+A + P LF+ ++N T++ L F +G IK ++ + TG+
Sbjct: 214 ILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGSIKSCEVIRDWKTGESL 273
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+E E D AY D ID RR+ VD +S W
Sbjct: 274 CYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKW 316
>gi|295661566|ref|XP_002791338.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280900|gb|EEH36466.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 442
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPF-KTLFIARVNYDTSESKL 118
E E+L R R RA+ + ++ ++ P A + P LF+ ++N T + L
Sbjct: 213 EVAVEKLRREREARAQALTLEMVGDL--------PFAEVKPPENVLFVCKLNPVTQDEDL 264
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +GPI ++ +K TG YAFIE+E+++D AY G ID R+ VD
Sbjct: 265 HLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFS 324
Query: 179 RSRT 182
+S +
Sbjct: 325 QSVS 328
>gi|147843908|emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
Length = 216
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 26/237 (10%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
T+D ++++ + Y+ +E +R+ F +YG I + +++ + G + Y F+ + + R
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRS 59
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
A +G+ IDGR V+V+ R+R GG + S R ++
Sbjct: 60 AIDAINDMNGRDIDGRIVVVNEVRTR-------------------GGRSNFGRESFRRNS 100
Query: 216 ERERERYRL-ERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRR 274
ER + R +RER+ R + DR R+ +R R R ER R R+RDR R
Sbjct: 101 ERGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERGHERAR--DHDRTRDRFMDR 158
Query: 275 SRERIRD-DDIEEVEFRPKDRS-DRDRDRDRKRRRERENSEDRNERKRDRKERRKER 329
+R++ RD +D E+ R D+ +RD D D R RE N+ D +++ D+ E K+R
Sbjct: 159 NRDQDRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTND-HDKSGDKDEHSKKR 214
>gi|119177713|ref|XP_001240599.1| hypothetical protein CIMG_07762 [Coccidioides immitis RS]
gi|392867436|gb|EAS29335.2| peptidyl-prolyl cis-trans isomerase-like 4 [Coccidioides immitis
RS]
Length = 443
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +GPI ++ +K TG YAFIE+E+++D A
Sbjct: 246 PENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQA 305
Query: 160 YKHADGKKIDGRRVLVDVER--SRTVKGW----LPRRLG--GGLGGTRRGGPDVNL---K 208
Y G ID R+ VD + S+ W +R G GG GG +L +
Sbjct: 306 YFKMQGVLIDDHRIHVDFSQSVSKLSDSWRSATNAKRAGQRGGFGGIS------SLEKKR 359
Query: 209 HSGREDNERERERYRLERERELAGGPPRARSGSNDRE 245
H D R+ +RY + ++E R+GS RE
Sbjct: 360 HYRAADAPRQHDRYGMVFDKE------DIRTGSASRE 390
>gi|320032010|gb|EFW13966.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str.
Silveira]
Length = 443
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +GPI ++ +K TG YAFIE+E+++D A
Sbjct: 246 PENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQA 305
Query: 160 YKHADGKKIDGRRVLVDVER--SRTVKGW----LPRRLG--GGLGGTRRGGPDVNL---K 208
Y G ID R+ VD + S+ W +R G GG GG +L +
Sbjct: 306 YFKMQGVLIDDHRIHVDFSQSVSKLSDSWRSATNAKRAGQRGGFGGIS------SLEKKR 359
Query: 209 HSGREDNERERERYRLERERELAGGPPRARSGSNDRE 245
H D R+ +RY + ++E R+GS RE
Sbjct: 360 HYRAADAPRQHDRYGMVFDKE------DIRTGSASRE 390
>gi|190358439|ref|NP_001121802.1| peptidyl-prolyl cis-trans isomerase-like 4 [Danio rerio]
Length = 454
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A + P LF+ ++N T++ L F +G IK ++ + TG+
Sbjct: 220 QAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGLIKCCEIIRDWKTGE 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
YAFIE+E E D AY D ID RR+ VD +S
Sbjct: 280 SLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQS 318
>gi|327279975|ref|XP_003224730.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Anolis
carolinensis]
Length = 478
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 83 QEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A + P LF+ ++N T++ L F +GPIK ++ + T +
Sbjct: 220 QAILLEMVGDLPDADIRPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTSE 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
YAFIE+E E D AY D ID RR+ VD +S
Sbjct: 280 SLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQS 318
>gi|431904240|gb|ELK09637.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Pteropus alecto]
Length = 492
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 50 PKDTPPPTRVETREERL---------ERRRRERAEQVAYKLE---QEIALWDPNSFPNAT 97
P +P PTR + R+ + R E E++ + E Q I L P+A
Sbjct: 175 PDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDAD 234
Query: 98 MDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+ P LF+ ++N T++ L F +GPI+ ++ + TG+ YAFIE+E E D
Sbjct: 235 IKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDC 294
Query: 157 HSAYKHADGKKIDGRRVLVDVERS 180
A+ D ID RR+ VD +S
Sbjct: 295 EKAFFKMDNVLIDDRRIHVDFSQS 318
>gi|410960206|ref|XP_003986685.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4 [Felis catus]
Length = 492
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 50 PKDTPPPTRVETREERL---------ERRRRERAEQVAYKLE---QEIALWDPNSFPNAT 97
P +P PTR + R+ + R E E++ + E Q I L P+A
Sbjct: 175 PDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDAD 234
Query: 98 MDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+ P LF+ ++N T++ L F +GPI+ ++ + TG+ YAFIE+E E D
Sbjct: 235 IKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDC 294
Query: 157 HSAYKHADGKKIDGRRVLVDVERS 180
A+ D ID RR+ VD +S
Sbjct: 295 EKAFFKMDNVLIDDRRIHVDFSQS 318
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+FI ++YD +E + F YG I I +V +K TGK +G+ FI YE +R A +
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 164 DGKKIDGRRVLVD 176
+G K+ GR + VD
Sbjct: 92 NGIKLCGRSIRVD 104
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 23/191 (12%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L I ++ +DTS S +R +F+ +G IK + + + T +PRG+ F+E+ +D A K
Sbjct: 13 SLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALKE 72
Query: 163 ADGKKIDGRRVLVDV-ERSRTVKGWLPRRLGGGLGGTRRGGPD----------VNLKHSG 211
+G +IDG R+ V V ++ R+ + + GG R PD N ++
Sbjct: 73 MNGSEIDGSRIEVFVAQKGRSDPRHMRYKEKGGYAY--RKNPDNKIRRRYISKSNSRYGS 130
Query: 212 -------REDNERERERYRLERERELAGGPPR--ARSGSNDRERERERRRSRS-RERKRR 261
R + +ER RYR +R+++ R S D+ R+R RS S R R+ R
Sbjct: 131 YSRDKIRRRERSKERFRYRSSYDRKMSSYRDRKNYHMKSYDKYRDRNHDRSLSRRSREYR 190
Query: 262 TSRSRSRDRRR 272
+ SR RD+RR
Sbjct: 191 NNTSRYRDKRR 201
>gi|328706089|ref|XP_003242994.1| PREDICTED: hypothetical protein LOC100573072 [Acyrthosiphon pisum]
Length = 362
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 73/108 (67%), Gaps = 18/108 (16%)
Query: 264 RSRSRDRRRRRSRER----IRDDDIEEVEFRPKDRS-DRDRDRDRKRR-----RERENSE 313
++RSR+R+ RRSR+R + +D++EEV P +S D+D + +RKR+ R+RE+ +
Sbjct: 217 KTRSRERKIRRSRDRGSKDVENDEVEEV---PVTKSRDKDHESERKRKQRSCSRDRESKK 273
Query: 314 DRNE---RKRDR-KERRKERERNNEEREEKVFIKQEPVDDY-QEYDNY 356
DR E +RD+ K+RR E R+N ER++K+ KQEPVD+Y YDNY
Sbjct: 274 DRKESDHHRRDKSKDRRDEHYRDNSERDDKIHTKQEPVDEYDNSYDNY 321
>gi|384872281|gb|AFI25171.1| peptidyl-prolyl cis-trans isomerase [Beauveria bassiana]
Length = 481
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRRE 121
EE LER+RRER E A L E+ P A + P LF+A++N T++ L
Sbjct: 216 EETLERKRRER-EANAQALTLEMM----GDLPFAEVRPPENVLFVAKLNPVTADEDLELI 270
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +G I ++ + TG YAFIEY+ + +AY G ID RR+ VD +S
Sbjct: 271 FGRFGKILSCEVIRDAKTGDSLQYAFIEYDEKASCETAYFKMQGVLIDDRRIHVDFSQS 329
>gi|351707520|gb|EHB10439.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Heterocephalus glaber]
Length = 490
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 50 PKDTPPPTRVETREERL---------ERRRRERAEQVAYKLE---QEIALWDPNSFPNAT 97
P +P PTR + R+ + R E E++ + E Q I L P+A
Sbjct: 175 PDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDAD 234
Query: 98 MDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+ P LF+ ++N T++ L F +GPI+ ++ + TG+ YAFIE+E E D
Sbjct: 235 IKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDC 294
Query: 157 HSAYKHADGKKIDGRRVLVDVERS 180
A+ D ID RR+ VD +S
Sbjct: 295 EKAFFKMDNVLIDDRRIHVDFSQS 318
>gi|255954949|ref|XP_002568227.1| Pc21g11960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589938|emb|CAP96093.1| Pc21g11960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 444
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 65 RLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEV 124
+L R R RA+ + ++ ++ D P LF+ ++N T + L F
Sbjct: 218 KLRREREARAQALTLEMVGDLPFAD-------VKPPENILFVCKLNPVTQDEDLNLIFSR 270
Query: 125 YGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--SRT 182
+G I ++ +K TG YAFIE+E ++D AY G ID R+ VD + S+
Sbjct: 271 FGTILSCEVIRDKRTGDSLQYAFIEFEEQKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKL 330
Query: 183 VKGW-----LPRRLGGGLGGT 198
+ W RR GG GG
Sbjct: 331 SESWRNSTVTKRRQRGGFGGV 351
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L I ++ YDTS S +R +F+ +G IK + + + T +PRG+ F+E+ +D A K
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEVALKE 72
Query: 163 ADGKKIDGRRVLVDV 177
+G +IDG RV V V
Sbjct: 73 MNGAEIDGNRVEVFV 87
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L I ++ YDTS S +R +F+ +G IK + + + T +PRG+ F+E+ +D A K
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 163 ADGKKIDGRRVLVDV 177
+G +IDG R+ V V
Sbjct: 73 MNGSEIDGNRIEVFV 87
>gi|417401870|gb|JAA47800.1| Putative peptidyl prolyl cis-trans isomerase [Desmodus rotundus]
Length = 494
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A + P LF+ ++N T++ L F +GPI+ ++ + TG+
Sbjct: 222 QAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGE 281
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
YAFIE+E E D A+ D ID RR+ VD +S
Sbjct: 282 SLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQS 320
>gi|312381256|gb|EFR27046.1| hypothetical protein AND_06483 [Anopheles darlingi]
Length = 749
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 47 FEDPKDT-PPPTRVETREERLERRRRERAEQV---AYKLEQEIA--------------LW 88
F+DP PP ERL+ R E++ K EQEIA L
Sbjct: 166 FDDPSGLRPPSRSPSPSAERLQGGRIAADEEIDDLDGKTEQEIAEMIAEREAKARATILE 225
Query: 89 DPNSFPNATMD-PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
P+A + P LF+ ++N T++S L+ F +G I ++ +KVTG YAF
Sbjct: 226 IVGDIPDADIAPPENVLFVCKLNPVTADSDLQIIFSRFGKIVGCEVIRDKVTGDSLQYAF 285
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
IE+E ++ +AY D ID RR+ VD +S + W
Sbjct: 286 IEFEDKKSCETAYFKMDNVLIDDRRIHVDFSQSVSKIKW 324
>gi|443722727|gb|ELU11487.1| hypothetical protein CAPTEDRAFT_152742 [Capitella teleta]
Length = 450
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +GPIK ++ K T + YAFIE+E E D SA
Sbjct: 240 PDNVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIREKKTLESLQYAFIEFEKEEDCESA 299
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y D +ID RR+ VD +S
Sbjct: 300 YFKMDNVQIDERRIHVDFSQS 320
>gi|391341895|ref|XP_003745262.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Metaseiulus occidentalis]
Length = 531
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 10/186 (5%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q L P+A M P LF+ ++N T++ L F +G IK ++ + TG+
Sbjct: 220 QATVLEIIGDLPDADMAPPENVLFVCKLNPVTNDDDLELIFSRFGEIKGCEIIRDWKTGE 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRG 201
YAFIE+ ++ AY D ID RR+ VD +S W G G G
Sbjct: 280 SLQYAFIEFANKESCEQAYFKMDNVLIDDRRIHVDFSQSVAKVKW----KGKGRGVVGDW 335
Query: 202 GPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRR 261
D K R D +R RE+Y + R+ G R G +D + ++R SRS + + R
Sbjct: 336 SED---KKKTRSD-DRPREKYVMRDTRKKDGYKLILR-GESDARKSQKREMSRSPDNRHR 390
Query: 262 TSRSRS 267
+ R S
Sbjct: 391 SHRKTS 396
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ +N++ SE ++ F +GP+K + + + +T + +G+AF+EY + +A KH
Sbjct: 253 IYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHM 312
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
+G + GR+ + V R T LP G
Sbjct: 313 NGFMLAGRQ--LKVGRPHTPGAGLPGMPG 339
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ +++D + ++ FE +G +K V++ N TGK +GY F+EYE + A +
Sbjct: 413 IYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQM 472
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGGGL 195
+G + GR + V R+ + LP G GL
Sbjct: 473 NGWDLGGRP--IKVGRAISSAPILPTP-GAGL 501
>gi|224142105|ref|XP_002324399.1| predicted protein [Populus trichocarpa]
gi|222865833|gb|EEF02964.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
T+D ++++I + Y+ SE LRR F +YG I + +++N T + Y F+ + + R
Sbjct: 1 MTIDDDRSIYIGGLPYNASEDTLRRVFNLYGSIVAVKIINNHGT-SGKCYGFVTFRNPRS 59
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDN 215
+ A +GK IDGR V V+ SR+ G + G D+ H R
Sbjct: 60 VIDAINDMNGKTIDGRVVRVNGVTSRS-------------GKSNFTGEDIR-SHVERGRE 105
Query: 216 ERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRR--R 273
Y +R R+ NDR RER+R + +R +R DR R
Sbjct: 106 RGRERDYDHDRHRQW----------HNDRSRERDRSWGYDEDSERGYEHARLHDRARDGF 155
Query: 274 RSRERIRDDDIEEVEFRPKDRSDRDRDR 301
R+R R+ ++E E + +SDR+++R
Sbjct: 156 YGRDRSRERELENNEQEKEWKSDRNKER 183
>gi|346467965|gb|AEO33827.1| hypothetical protein [Amblyomma maculatum]
Length = 488
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 93 FPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A + P LF+ ++N T++ L F +GP+K ++ +K TG YAF+E+E
Sbjct: 230 LPDAEVAPPENVLFVCKLNPVTTDEDLEIIFSRFGPVKSCEVIRDKKTGDSLQYAFVEFE 289
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTR--------RGGP 203
+AY D ID RR+ VD +S W G G G RGG
Sbjct: 290 QRDHCENAYFKMDNVLIDDRRIHVDFSQSVAKLRW----KGKGRGVEHVDEKQKKPRGGA 345
Query: 204 DVNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERERER----RRSRSRERK 259
LK + R E + + + E E G R G +++RE R RR+ +
Sbjct: 346 RYELKETARRGAENQYD--LVFSEDEEGPGGERVERGHIEKKREGHRDSNDRRATRSDGH 403
Query: 260 RRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERENSEDRNERK 319
R + S RDR R+R D RS R RD DRK R+ +
Sbjct: 404 RDSRDSGGRDRHSNTHRDRHGD----------SHRSTR-RDHDRKSHRDEHH-------- 444
Query: 320 RDRKERRKE 328
RKER KE
Sbjct: 445 --RKEREKE 451
>gi|346318079|gb|EGX87684.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Cordyceps
militaris CM01]
Length = 505
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 118/301 (39%), Gaps = 37/301 (12%)
Query: 45 NEFEDPKDTPPPTRVETR-----------------EERLERRRRERAEQVAYKLEQEIAL 87
N +P +PPP+ + + EE LER+RR R E A L E+
Sbjct: 181 NGLREPSASPPPSDQQLKTVRIADEAALHQDDGVDEETLERKRRSR-EANAQALTLEMM- 238
Query: 88 WDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
P A + P LF+A++N T++ L F +G I ++ + T YA
Sbjct: 239 ---GDLPFAEVRPPENVLFVAKLNPVTADEDLELIFGRFGKILSCEVIRDAKTQDSLQYA 295
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--SRTVKGWLPRRLGGGLGGTRRGGPD 204
FIEY+ + +AY G ID RR+ VD + SR W RGG
Sbjct: 296 FIEYDEKASCEAAYFKMQGVLIDDRRIHVDFSQSVSRISDVWRNNANNKRRANASRGG-- 353
Query: 205 VNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSR 264
G D +R +YR E +R+ AG R+ D E R R E RR
Sbjct: 354 -----WGGVDELEKRRQYRKEADRQ-AG---RSYGMVYDNEEMRGRHERVGAEAGRRPGG 404
Query: 265 SRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERENSEDRNERKRDRKE 324
+ + RR R RD D++ R R R+R + D N R+RD
Sbjct: 405 EEADEARRSEPRAG-RDRDMDYRRTSRSRSPRRQDRSPDGRPRDRASGRDGNGRRRDEDG 463
Query: 325 R 325
R
Sbjct: 464 R 464
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ + D K I GR++ +
Sbjct: 68 FHNLDRKWICGRQIEI 83
>gi|432945393|ref|XP_004083576.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Oryzias
latipes]
Length = 463
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A M P LF+ ++N T++ L F +G IK ++ + +G
Sbjct: 220 QAILLEMVGDLPDADMKPPENVLFVCKLNPVTTDEDLEIIFSRFGSIKSCEIIRDWKSGD 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
YAFIE+E + D AY D ID RR+ VD +S
Sbjct: 280 SLCYAFIEFEKQEDCEKAYFKMDNVLIDDRRIHVDFSQS 318
>gi|427794309|gb|JAA62606.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 412
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 53/229 (23%)
Query: 78 AYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNK 137
A LE L D ++ P P LF+ ++N T++ L F +GP+K ++ ++
Sbjct: 139 ATVLEMIGDLPDADAAP-----PENVLFVCKLNPVTTDEDLEIIFSRFGPVKSCEVIRDR 193
Query: 138 VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG----- 192
TG YAF+E+E +A+ D ID RR+ VD +S W + G
Sbjct: 194 KTGDSLQYAFVEFEQREHCENAFFKMDNVLIDDRRIHVDFSQSVAKLRWKGKGRGVEYIN 253
Query: 193 ---------------------GGLGGT---------RRGGPDVNLKHSGREDNER----- 217
GG GG GG D N K E NER
Sbjct: 254 DDKGGKKPRGARYELKDTARRGGAGGQYDLVWSDNEEEGGKDTNQK----ERNERSQKDR 309
Query: 218 ----ERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRT 262
++RY+ + + +GG R + R R + RRS R+++RR+
Sbjct: 310 KKESHKDRYKDDHKDSRSGGHKDDRHADSRRGRHEDSRRSSHRDQERRS 358
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER---------SRTVKGWLPRRLGGGLGGTRRGGP 203
RD A DG +DGR + V + R SR + RR GGLGG+ R GP
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGGNGVWRRDNGGLGGSARAGP 124
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 43 FLNEFEDPKDTPPPTRVETREERLERR-RRERAEQVAYKLEQEIALWDPNSFPNATMDPF 101
+LN + + P T+V+ E ER + A++V++ E + + W
Sbjct: 11 YLNAERELAEMNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAW------------- 57
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+F+ + Y+ +E + F YG I I +V +K TGK +G+ F+ YE +R A
Sbjct: 58 --IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 115
Query: 162 HADGKKIDGRRVLVD 176
+ +G KI GR + VD
Sbjct: 116 NFNGIKIKGRTIRVD 130
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L I ++ ++TS S +R +F+ +G IK + + + T +PRG+ F+E+ +D A K
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 163 ADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERY 222
+G ++DG R+ V V GR D
Sbjct: 73 MNGSELDGNRIEVFVA------------------------------QKGRSDP------- 95
Query: 223 RLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDD 282
R+ R +E GG +D R +RR S+ R S SR + RRR +SRERIR
Sbjct: 96 RIMRYKERGGGSGYGHRKYSD---NRLKRRYISKSNSRYGSYSRDKIRRRDKSRERIRYR 152
Query: 283 DIEEVEFR 290
D E R
Sbjct: 153 DSYERNMR 160
>gi|193579992|ref|XP_001945585.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like isoform
3 [Acyrthosiphon pisum]
gi|328708407|ref|XP_003243680.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like isoform
2 [Acyrthosiphon pisum]
Length = 472
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 70 RRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPI 128
+R+ E +A EI P+A + P LF+ ++N TS+ L+ F +G I
Sbjct: 209 KRQEKEALARATILEIV----GDLPSADIAPPENVLFVCKLNPVTSDDDLQIIFSRFGKI 264
Query: 129 KKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLP 188
++ +K + YAF+E+++++ AY D ID RR+ VD +S + WL
Sbjct: 265 VSCEVIRDKKSENSLQYAFVEFDNQKSCEDAYLKMDNVLIDDRRIHVDFSQSVSKIKWL- 323
Query: 189 RRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERER 248
G RG +K++ ++D G + S R ++R
Sbjct: 324 --------GKGRG-----VKYTDKDDE-----------------GKNISDKYSKYRNKKR 353
Query: 249 ERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEE-VEFRPKDRSDRDRDRDRKRRR 307
+ SR+ K + S S+ R R R+ + EE V + R+D+D + RRR
Sbjct: 354 DSHVSRNNYIKNKMSIHESKRHRNDDKNYRYRESEKEERVPYNKYGRNDKDEN----RRR 409
Query: 308 ERENSEDRNERKR-DRKERRKERERNNE 334
E+++ +N R +RK R ER+ NE
Sbjct: 410 EKDDKMKKNYRNEGERKNHRNERDGKNE 437
>gi|357624977|gb|EHJ75550.1| hypothetical protein KGM_17346 [Danaus plexippus]
Length = 666
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 47 FEDPKDTPPPTRVETR----------------EERLERRRRERAEQVAYKLEQEIA---- 86
EDP + PP R +R +E ++ + + AE++ +E++ A
Sbjct: 162 LEDPFNDPPGLRAPSRSPSPSAERLKGGRIAPDEEIDEAQGKTAEEIQEMIEEKEAKARA 221
Query: 87 --LWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
L P+A + P LF+ ++N T++ L F +G I ++ +K T
Sbjct: 222 TILEIVGDLPDAEIAPPENVLFVCKLNPVTTDEDLEIIFSRFGKIVSCEVIRDKKTSNSL 281
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG 192
YAFIE+++++ AY D ID RR+ VD +S + WL + G
Sbjct: 282 QYAFIEFDNKKSCEDAYFKMDNVLIDDRRIHVDFSQSVSKMRWLGKGRG 330
>gi|302901262|ref|XP_003048399.1| hypothetical protein NECHADRAFT_95831 [Nectria haematococca mpVI
77-13-4]
gi|256729332|gb|EEU42686.1| hypothetical protein NECHADRAFT_95831 [Nectria haematococca mpVI
77-13-4]
Length = 483
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 50 PKDTPPPTRVETR-----------------EERLERRRRERAEQVAYKLEQEIALWDPNS 92
P +PPPT + + EE LE+RRR R Q Q + L
Sbjct: 186 PSSSPPPTDQQLKTVRIADEAALHADDNVDEEELEKRRRNREAQA-----QALTLEMMGD 240
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P A + P + LF+ ++N T + L F +G I ++ ++ TG YAFIEYE
Sbjct: 241 LPFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYE 300
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
+ +AY ID RR+ VD +S +
Sbjct: 301 DKASCEAAYFKMQDVLIDDRRIHVDFSQSVS 331
>gi|328876749|gb|EGG25112.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Dictyostelium fasciculatum]
Length = 495
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 47 FEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFI 106
FE +D T+ +++EE E + A + LE L N P P LF+
Sbjct: 190 FEADEDIDQETKGKSKEEIDEMMDEKSARGRSELLEMLGVLPQANVKP-----PENVLFV 244
Query: 107 ARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGK 166
++N DT L F G +K ++ + V+G+ Y FIEYE + +AYK +
Sbjct: 245 CKLNPDTESEDLELAFSKCGVVKSCEIIKDPVSGESLCYGFIEYESKEQCENAYKKMENT 304
Query: 167 KIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVN 206
ID RR+ VD +S + G G +GG VN
Sbjct: 305 FIDERRIHVDFCQSI---AKIKHMYGNGAANFLQGGKRVN 341
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 72 ERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKI 131
ER Q+ K E W + + N+ +FI Y+ +E + F YG I I
Sbjct: 15 EREAQLGIK---ETVSW-HSVYKNSAW-----VFIGGFPYELTEGDIICVFSQYGEIANI 65
Query: 132 VMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
+V +K TGK +G+ F+ YE +R A + +G KI GR + VD
Sbjct: 66 NLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVD 110
>gi|383847372|ref|XP_003699328.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Megachile rotundata]
Length = 507
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 104/252 (41%), Gaps = 48/252 (19%)
Query: 47 FEDPKD------TPPPTR------------------VETREERLERRRRERAEQVAYKLE 82
FEDPKD +PPPT+ T EE E ++ + A+ A LE
Sbjct: 166 FEDPKDFIVPDQSPPPTKEVLMSDRIGADEVIDDTAGMTIEEITEMQKEKEAKARATILE 225
Query: 83 QEIALWDPNSFPNATMD-PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
P+A M P LF+ ++N T++ L F +G I ++ +K TG
Sbjct: 226 I------VGDIPDADMAPPENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDKQTGD 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRG 201
YAFIE+ + A+ D ID RR+ VD +S W G G G
Sbjct: 280 SLQYAFIEFAERKSCEEAFFKMDNVLIDDRRIHVDFSQSVAKMRW----KGKGKG----- 330
Query: 202 GPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRERE---RERRRSRSRER 258
+++ ED E + R +R+ + G R+R + R +E R+ R +E
Sbjct: 331 -----IQYFDEEDEEGHNKDTRGKRKNDFRGNETRSRREFDRRNKEEIVEHRKHERRKEV 385
Query: 259 KRRTSRSRSRDR 270
K + SR+ +R
Sbjct: 386 KGNSDYSRNGER 397
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 43 FLNEFEDPKDTPPPTRVETREERLERR-RRERAEQVAYKLEQEIALWDPNSFPNATMDPF 101
+LN + + P T+V+ E ER + A++V++ E + + W
Sbjct: 11 YLNAERELAEMNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAW------------- 57
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+F+ + Y+ +E + F YG I I +V +K TGK +G+ F+ YE +R A
Sbjct: 58 --IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 115
Query: 162 HADGKKIDGRRVLVD 176
+ +G KI GR + VD
Sbjct: 116 NFNGIKIKGRTIRVD 130
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|332376873|gb|AEE63576.1| unknown [Dendroctonus ponderosae]
Length = 481
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 93 FPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A M P LF+ ++N TS+ L F +G IK ++ ++ +G YAFIE+E
Sbjct: 230 IPDADMAPPENVLFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKSGDSLQYAFIEFE 289
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWL 187
++ AY ID RR+ VD +S + WL
Sbjct: 290 EQKACEDAYFKMGNVLIDDRRIHVDFSQSVSKVKWL 325
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|308500055|ref|XP_003112213.1| CRE-SIG-7 protein [Caenorhabditis remanei]
gi|308268694|gb|EFP12647.1| CRE-SIG-7 protein [Caenorhabditis remanei]
Length = 452
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 61 TREERLER-RRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
T EE E R+RE AEQ A LE L D + P P LF+ ++N T++ L
Sbjct: 219 TAEEIAEELRQREMAEQ-AQILEMVGDLKDADEVP-----PENVLFVCKLNPVTTDEDLE 272
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
F +G I +V ++ +G YAFIE+++E+ A+ D ID RR+ VD +
Sbjct: 273 IIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQAFFKMDNVLIDDRRIHVDFSQ 332
Query: 180 S 180
S
Sbjct: 333 S 333
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 43/189 (22%)
Query: 67 ERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYG 126
E R+RE AEQ A LE L D + P P LF+ ++N T++ L F +G
Sbjct: 226 ELRQREMAEQ-AQILEMVGDLKDADEVP-----PENVLFVCKLNPVTTDEDLEIIFSRFG 279
Query: 127 PIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
I +V ++ +G YAFIE+++E+ A+ D ID RR+ VD +S +
Sbjct: 280 KINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQAFFKMDNVLIDDRRIHVDFSQSVSQ--- 336
Query: 187 LPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSGSNDRER 246
N K+ + N E R R S R
Sbjct: 337 -------------------NYKYKPKSKNVEEPPR---------------RRPQSPPRRP 362
Query: 247 ERERRRSRS 255
E +R +S
Sbjct: 363 EIKRSHQKS 371
>gi|322699404|gb|EFY91166.1| RNA binding protein [Metarhizium acridum CQMa 102]
Length = 490
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 128/311 (41%), Gaps = 52/311 (16%)
Query: 50 PKDTPPPTRVETR-----------------EERLERRRRERAEQVAYKLEQEIALWDPNS 92
P +PPPT + + E LER RR+ E A L E+
Sbjct: 186 PSTSPPPTDSQLKTVRIADEAALHEHDGVDEAELERLRRQ-TEANAQALTLEMM----GD 240
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P A + P + LF+ ++N T + L F +G I ++ + TG YAFIEYE
Sbjct: 241 LPFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYE 300
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG----------GGLGGT--- 198
+ +AY G ID RR+ VD +S + + R+ GG GG
Sbjct: 301 DKASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRANASRGGWGGVDEL 360
Query: 199 -----RRGGPDVNLKHSGREDNERERERYRLERE--RELAGGPPRARSGSNDRERERERR 251
R D K++ E + R ER R++ G P + G + R + R
Sbjct: 361 EKRRQYRAEVDAPQKNNYGMVYGDEEMKGRHERSGRRDIRGEDP-STVGEDRRNDQGSRS 419
Query: 252 RS-RSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERE 310
RS R+RER R R RR RE R D R +D+DR R R R R+R
Sbjct: 420 RSPRTRERTRDRQPGRGDVHRRGDRREWGRRD-------RNPTYNDKDRYRQRARDRDRG 472
Query: 311 NSEDRNERKRD 321
+D+++ +RD
Sbjct: 473 EHQDKDKEQRD 483
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + +D LRR FE +G +K I + + TG+PRG+ F++Y +D A H
Sbjct: 43 SLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHH 102
Query: 163 ADGKKIDGRRVLV 175
DG+ + GR + V
Sbjct: 103 MDGRVLLGRELTV 115
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDR 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVAR 91
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PXTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|357620131|gb|EHJ72437.1| putative U11/U12 snRNP 35K [Danaus plexippus]
Length = 181
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
DP T+F+AR+N T+E + EF +G + +V + VTGK + YAF+EYE+ +
Sbjct: 51 DPNHTIFVARLNPRTTEDTIYSEFSKFGKVINCRLVKDIVTGKSKQYAFVEYENLSSLDG 110
Query: 159 AYKHADGKKIDGRRVLVD 176
A K + + +D ++V+
Sbjct: 111 ALKDMNNEYLDSFEIIVE 128
>gi|296082685|emb|CBI21690.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 17/214 (7%)
Query: 85 IALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
+ L P+A + P LF+ ++N T + L F +G + ++ + TG
Sbjct: 225 VVLESIGDIPDAEIKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSL 284
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR-----LGGGLGGT 198
YAFIE+E AY D ID RR+ VD +S + K W R G G G
Sbjct: 285 CYAFIEFETNEACEQAYFKMDNALIDDRRIHVDFSQSVS-KLWSQYRRRDHQTGKGTGCF 343
Query: 199 RRGGPD-VNLKHSGREDNERERERYRLERERELAGGPPRAR---------SGSNDRERER 248
+ G D + +G +++ +Y L+ GG +R S S RE+ R
Sbjct: 344 KCGAVDHIAKDCTGSPTKQQQPPKYILKDNNTQHGGDNNSRYEMVFDEDTSESPKREKRR 403
Query: 249 ERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDD 282
+ + K + +R S D +RR ++ DD
Sbjct: 404 QDHGPEDQIEKEKLNRRGSEDWKRRDHDKKDSDD 437
>gi|170029308|ref|XP_001842535.1| peptidyl-prolyl cis-trans isomerase cyp6 [Culex quinquefasciatus]
gi|167881638|gb|EDS45021.1| peptidyl-prolyl cis-trans isomerase cyp6 [Culex quinquefasciatus]
Length = 655
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A M P + LF+ ++N T++ L+ F +G I ++ +KV+G YAFIE+E
Sbjct: 231 IPDAEMAPPENVLFVCKLNPVTTDDDLQIIFSRFGKIVGCEVIRDKVSGDSLQYAFIEFE 290
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
++ AY D ID RR+ VD +S W
Sbjct: 291 DKKSCEDAYFKMDNVLIDDRRIHVDFSQSVAKLRW 325
>gi|93140633|sp|P0C196.1|PPIL4_USTMA RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
Length = 551
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 108/304 (35%), Gaps = 57/304 (18%)
Query: 47 FEDPKDTPPPTRVETREERL----------------ERRRRERAEQVAYKLEQEIALWDP 90
F P +P PT + R RL E RR A LE
Sbjct: 196 FCAPSRSPSPTPCQVRALRLADDEDVHSDVDPASKEEMRRNADTNAAALTLEM------V 249
Query: 91 NSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIE 149
P A + P LF+ ++N T L F +G I ++ +K TG YAFIE
Sbjct: 250 GDLPFAEIRPPENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIE 309
Query: 150 YEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKH 209
++ + D AY +D RR+ VD +S + RL G R G D H
Sbjct: 310 FDKKDDAERAYFKMQNVLVDDRRIWVDFSQSVS-------RLHGDWVKKRNAGSDAPRAH 362
Query: 210 SGREDNERERERYRLERERELAGG--------------PPRARSGSNDRERERERRRSRS 255
+E+ + YR AGG P AR D R+ S
Sbjct: 363 YQSGADEQSVDSYRPN-----AGGYQKRGDDRRHDRRDQPTAR---GDTSSWHSRQDS-- 412
Query: 256 RERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRERENSEDR 315
ER R S +RDR +RSR DD+ + +R D RD +R D
Sbjct: 413 -ERSYRESNDDTRDRSNKRSRR--HHDDVPQQSRSRSERHDSHRDHERHHLSRHVRPSDE 469
Query: 316 NERK 319
E K
Sbjct: 470 GESK 473
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKCICGRQIEI 83
>gi|449302928|gb|EMC98936.1| hypothetical protein BAUCODRAFT_65867 [Baudoinia compniacensis UAMH
10762]
Length = 460
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E+L R R RA+ + +L ++ D P + LF+ ++N T + L F
Sbjct: 224 EKLRREREARAQALTLELIGDLPFAD-------VTPPEQILFVCKLNPVTRDEDLELIFS 276
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS--- 180
+G I ++ ++ TG YAFIE+ + D AY G ID R+ VD +S
Sbjct: 277 RFGKILSCEVIRDRKTGDSLQYAFIEFAKKEDCERAYFKMQGVLIDDHRIHVDFSQSVSK 336
Query: 181 -----RTVKGWLPRRLGGGLGGTRR-----------GGPDVNLKHSGREDN-ERERERYR 223
R+ R GG GG GG DV+ ++ DN ER R R R
Sbjct: 337 LSKEWRSTTNSKTARSRGGFGGIDSLEKRRQYRGVDGGRDVDDEYDYIFDNDERRRARNR 396
Query: 224 LERE 227
++ +
Sbjct: 397 MDTD 400
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|380018663|ref|XP_003693245.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Apis
florea]
Length = 613
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 31/165 (18%)
Query: 47 FEDPKD------TPPPTR------------------VETREERLERRRRERAEQVAYKLE 82
FEDPK+ +PPPT+ T EE +E ++ + A+ A LE
Sbjct: 166 FEDPKNFIVPDQSPPPTKEVLMSDRIGADEVIDDTAGMTAEEIIEMQKEKEAKARATILE 225
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
P+A M P LF+ ++N T++ L F +G I ++ ++ TG
Sbjct: 226 I------VGDIPDADMAPPENVLFVCKLNPVTTDDDLEIVFSRFGKIIGCEVIRDRQTGD 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+ + AY D ID RR+ VD +S W
Sbjct: 280 SLQYAFIEFADRKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRW 324
>gi|328791237|ref|XP_001121334.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Apis
mellifera]
Length = 507
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 31/165 (18%)
Query: 47 FEDPKD------TPPPTR------------------VETREERLERRRRERAEQVAYKLE 82
FEDPK+ +PPPT+ T EE +E ++ + A+ A LE
Sbjct: 166 FEDPKNFVVPDQSPPPTKEVLMSDRIGADEVIDDTAGMTAEEIIEMQKEKEAKARATILE 225
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
P+A M P LF+ ++N T++ L F +G I ++ ++ TG
Sbjct: 226 I------VGDIPDADMAPPENVLFVCKLNPVTTDDDLEIVFSRFGKIIGCEVIRDRQTGD 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+ + AY D ID RR+ VD +S W
Sbjct: 280 SLQYAFIEFADRKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRW 324
>gi|359494535|ref|XP_002266085.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Vitis
vinifera]
Length = 627
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 17/214 (7%)
Query: 85 IALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
+ L P+A + P LF+ ++N T + L F +G + ++ + TG
Sbjct: 225 VVLESIGDIPDAEIKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSL 284
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRR-----LGGGLGGT 198
YAFIE+E AY D ID RR+ VD +S + K W R G G G
Sbjct: 285 CYAFIEFETNEACEQAYFKMDNALIDDRRIHVDFSQSVS-KLWSQYRRRDHQTGKGTGCF 343
Query: 199 RRGGPD-VNLKHSGREDNERERERYRLERERELAGGPPRAR---------SGSNDRERER 248
+ G D + +G +++ +Y L+ GG +R S S RE+ R
Sbjct: 344 KCGAVDHIAKDCTGSPTKQQQPPKYILKDNNTQHGGDNNSRYEMVFDEDTSESPKREKRR 403
Query: 249 ERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDD 282
+ + K + +R S D +RR ++ DD
Sbjct: 404 QDHGPEDQIEKEKLNRRGSEDWKRRDHDKKDSDD 437
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|322704953|gb|EFY96543.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 490
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 63 EERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRRE 121
E LERRRR+ E A L E+ P A + P LF+ ++N T + L
Sbjct: 216 EAELERRRRQ-TEANAQALTLEMM----GDLPFAEVKPPENVLFVCKLNPVTGDEDLELI 270
Query: 122 FEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +G I ++ + TG YAFIEYE + +AY G ID RR+ VD +S
Sbjct: 271 FGRFGKILSCEVIRDAKTGDSLQYAFIEYEDKASCEAAYFKMQGVLIDDRRIHVDFSQS 329
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D TL + + Y TS LRR FE YG + + + T PRG+AF+ + +
Sbjct: 6 PPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQ 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG ++DGR + V V R
Sbjct: 66 RDAEDAEAAMDGAELDGRELRVQVAR 91
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++D LRR F +G IK I + + TG+PRG+ F++Y D A H
Sbjct: 37 SLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHH 96
Query: 163 ADGKKIDGRRVLV 175
DG + GR + V
Sbjct: 97 MDGCVLLGRELTV 109
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|346977630|gb|EGY21082.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium dahliae
VdLs.17]
Length = 509
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 50 PKDTPPPTRVETR-----------------EERLERRRRERAEQVAYKLEQEIALWDPNS 92
P +PPPT+ + E+ +E+RRR+R + Q + L
Sbjct: 186 PSRSPPPTKAQLATVRIADEAALHEDDALGEDAIEKRRRDREARA-----QALTLEMMGD 240
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P A + P + LF+ ++N T++ L F +G I ++ +K TG YAFIEY+
Sbjct: 241 LPFAEVAPPENILFVCKLNPVTTDGDLELIFGRFGTILSCEVIRDKKTGDSLQYAFIEYD 300
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
+ +AY ID RR+ VD +S +
Sbjct: 301 DKSSCEAAYFKMQDVLIDDRRIHVDFSQSVS 331
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|452844589|gb|EME46523.1| hypothetical protein DOTSEDRAFT_169172 [Dothistroma septosporum
NZE10]
Length = 465
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E+L R R RA+ + +L ++ D P + LF+ ++N T + L F
Sbjct: 224 EKLRREREARAQALTLELIGDLPFAD-------VTPPEQILFVCKLNPVTRDEDLELIFS 276
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+G I ++ +K TG YAFIE+ ++ D AY G ID R+ VD +S
Sbjct: 277 RFGKILSCEVIRDKKTGDSLQYAFIEFANKEDCERAYFKMQGVLIDDHRIHVDFSQS 333
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|319411847|emb|CBQ73890.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Sporisorium reilianum SRZ2]
Length = 543
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKL 118
+T + L+ RR A+ A L E+ P A + P LF+ ++N T L
Sbjct: 217 DTEDAALKEERRRNADTNAAALTLEMV----GDLPFAEIRPPENILFVCKLNPVTRSDDL 272
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G I ++ +K TG YAFIE++ + D AY +D RR+ VD
Sbjct: 273 ELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDQKDDAERAYFKMQNVLVDDRRIWVDFS 332
Query: 179 R--SRTVKGWLPRRLGG--------GLGGTRRGGPDVNLKHSGREDNERERERYRLERER 228
+ SR W+ R GG G GG G + R D+ R E R
Sbjct: 333 QSVSRLHGDWVRGRNGGREAPKGHYGWGGAESG--------TARVDSYRPSEGGGGRNRR 384
Query: 229 ELAGGPPRARS-GSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDD 283
+ R+ S +DR RE ++R S R + R R+R +RSR RDDD
Sbjct: 385 DRQRDSGRSTSRYEDDRRRESDQRHSERRPHDKEDDR---REREHKRSR---RDDD 434
>gi|409050528|gb|EKM60005.1| hypothetical protein PHACADRAFT_138409 [Phanerochaete carnosa
HHB-10118-sp]
Length = 440
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 44 LNEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKT 103
+ E EDP T P EE E RR++ AE A LE L N P P
Sbjct: 199 IAEDEDPLATLP------EEEAEELRRKKAAEASALTLEMVGDLPFANVRP-----PENV 247
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
LF+ ++N T + L F +G I ++ +K TG YAFIE++ D AY
Sbjct: 248 LFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKRTGDSLQYAFIEFDRREDAEQAYFKM 307
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGGG-------LGGTRRGGPDVNLKHSGREDNE 216
+D RR+ VD +S + RL G LG R+ G GRED E
Sbjct: 308 QNVLVDDRRIWVDFSQSVS-------RLNNGKWSNDAKLGPRRKPGAS---NFGGREDLE 357
Query: 217 RERERYR 223
R RYR
Sbjct: 358 ETR-RYR 363
>gi|32563661|ref|NP_871805.1| Protein SIG-7, isoform b [Caenorhabditis elegans]
gi|25004958|emb|CAD56584.1| Protein SIG-7, isoform b [Caenorhabditis elegans]
Length = 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 67 ERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYG 126
E ++RE AEQ A LE L D + P P LF+ ++N T++ L F +G
Sbjct: 143 ELQQREMAEQ-AQILEMVGDLKDADEVP-----PENVLFVCKLNPVTTDEDLEIIFSRFG 196
Query: 127 PIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
I +V ++ +G YAFIE+++ + A+ D ID RR+ VD +S
Sbjct: 197 KINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 250
>gi|210076262|ref|XP_504641.2| YALI0E31551p [Yarrowia lipolytica]
gi|199426981|emb|CAG80245.2| YALI0E31551p [Yarrowia lipolytica CLIB122]
Length = 763
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 83 QEIALWDPNSFPNATMDPFKT-LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q + L P A + P +T LF+ ++N T L F +G I +V + VTG
Sbjct: 480 QALTLEIIGDLPFAEIKPSETVLFVCKLNPVTEAEDLELIFSRFGEITGCQIVKDPVTGS 539
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGG 194
Y FIEY D AY +G ID R+ VD S++V+ R+ GGG
Sbjct: 540 SLQYGFIEYTTREDCERAYLKMEGVLIDDHRIHVDF--SQSVRKMQQRKQGGG 590
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 99 DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
D TL + + Y TS LRR FE YG + + + T PRG+AF+ + RD
Sbjct: 1 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 60
Query: 159 AYKHADGKKIDGRRVLVDVER 179
A DG ++DGR + V V R
Sbjct: 61 AEAAMDGAELDGRELRVQVAR 81
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
++ D K I GR++ +
Sbjct: 68 LRNLDRKWICGRQMEI 83
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|395329875|gb|EJF62260.1| cyclophilin-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 448
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREER 65
PP L+ +P PPV+ P + T + E EDP +T P +E
Sbjct: 179 PPGLV--------IPDSPPVK--PPDNSTR--------IAEDEDPLETMP------EDEA 214
Query: 66 LERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVY 125
E RR++ A+ A LE L N P P LF+ ++N T + L F +
Sbjct: 215 EEIRRKKAAQASALTLEMVGDLPFANVRP-----PENVLFVCKLNPVTGDEDLELIFSRF 269
Query: 126 GPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
G I ++ +K TG YAFIE++ D AY +D RR+ VD +S
Sbjct: 270 GKIMSCQVIRDKKTGDSLQYAFIEFDKREDAEQAYFKMQNVLVDDRRIWVDFSQS 324
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + Y+TS K+R F YG I+ + + + T KPRG+ F+E+ E D A +
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRG 73
Query: 163 ADGKKIDGRRVLV 175
DG++IDG +V V
Sbjct: 74 MDGEEIDGNKVEV 86
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ Y+ +E L F YG I I +V +K TGK +G+ FI YE +R A +
Sbjct: 38 IFVGGFPYELTEGDLICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNF 97
Query: 164 DGKKIDGRRVLVD 176
+G KI GR + VD
Sbjct: 98 NGIKIKGRTIRVD 110
>gi|410915872|ref|XP_003971411.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Takifugu rubripes]
Length = 440
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 85 IALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
I L P+A + P LF+ ++N T++ L F +G IK ++ + TG
Sbjct: 222 ILLEMVGDLPDAEVRPPENVLFVCKLNPVTTDEDLEIIFSRFGSIKSCEVIRDWKTGDSL 281
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
YAFIE+E + D AY D ID RR+ VD +S
Sbjct: 282 CYAFIEFEKQEDCEKAYFKMDNVLIDDRRIHVDFSQS 318
>gi|367039335|ref|XP_003650048.1| hypothetical protein THITE_2109253 [Thielavia terrestris NRRL 8126]
gi|346997309|gb|AEO63712.1| hypothetical protein THITE_2109253 [Thielavia terrestris NRRL 8126]
Length = 504
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 83 QEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q + L P A + P + LF+ ++N T+E L F +G I ++ ++ TG
Sbjct: 233 QALTLEMMGDLPFAEVKPPENVLFVCKLNPITNEEGLELIFSRFGKILSCEVIRDRKTGD 292
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--SRTVKGW----------LPR 189
YAFIE+E ++ AY D ID RR+ VD + SR + W
Sbjct: 293 SLQYAFIEFEDKKSCEEAYSKMDQVLIDDRRIHVDFSQSVSRLSEVWRNETNAKRKKAAM 352
Query: 190 RLGGGLGGTR 199
R GGG GG +
Sbjct: 353 RDGGGWGGVK 362
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ V DT LRREF YGP+ + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNVADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDRKWICGRQIEI 83
>gi|32563659|ref|NP_492343.2| Protein SIG-7, isoform a [Caenorhabditis elegans]
gi|25004959|emb|CAB03088.2| Protein SIG-7, isoform a [Caenorhabditis elegans]
Length = 427
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 67 ERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYG 126
E ++RE AEQ A LE L D + P P LF+ ++N T++ L F +G
Sbjct: 212 ELQQREMAEQ-AQILEMVGDLKDADEVP-----PENVLFVCKLNPVTTDEDLEIIFSRFG 265
Query: 127 PIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
I +V ++ +G YAFIE+++ + A+ D ID RR+ VD +S
Sbjct: 266 KINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 319
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+FI + D S ++L REFE G ++ + + N P G+ FI +E RD A +
Sbjct: 4 IFIGGLPEDASRTELEREFECIGRLRDVWVARN-----PPGFGFIIFEDPRDAEDAVREM 58
Query: 164 DGKKIDGRRVLVDVERSRT 182
DGKKI G R+ V++ R+ T
Sbjct: 59 DGKKICGSRIRVELARATT 77
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++ D +E LR FE +G I++I + + TG+ +G+AF++Y+ D A +H
Sbjct: 273 LYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHC 332
Query: 164 DGKKIDGRRVLVDV 177
+G ++ GR++ V +
Sbjct: 333 NGMELAGRQLKVGI 346
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
T+F + + SES+L F G + I ++ ++ + K +G+ +IEY + + A
Sbjct: 170 TVFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVPLALHQ 229
Query: 163 ADGKKIDGRRVLVDVERS 180
+G + G+ VLV + ++
Sbjct: 230 LNGTQCKGQTVLVQITQA 247
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + Y+ SE + F +G + ++ +K TGK +G+AF++YE +R + A +
Sbjct: 35 VYIGGLPYELSEGDIITIFSQFGEPVHVNLIRDKDTGKSKGFAFLKYEDQRSTNLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLG 196
G I GR + VD R + +G L LG G G
Sbjct: 95 GGATILGRIIRVDHTRYKPKEGELEELLGQGSG 127
>gi|452983234|gb|EME82992.1| hypothetical protein MYCFIDRAFT_64248 [Pseudocercospora fijiensis
CIRAD86]
Length = 454
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFE 123
E+L R R RA+ + +L ++ D P + LF+ ++N T + L F
Sbjct: 224 EKLRREREARAQALTLELIGDLPFAD-------VTPPEQILFVCKLNPVTRDDDLELIFS 276
Query: 124 VYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+G I ++ +K TG YAFIE+ ++ D AY G ID R+ VD +S
Sbjct: 277 RFGKILSCEVIRDKKTGDSLQYAFIEFANKEDCERAYFKMQGVLIDDHRIHVDFSQS 333
>gi|34784008|gb|AAH56814.1| Peptidylprolyl isomerase (cyclophilin)-like 4 [Danio rerio]
Length = 454
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
Q I L P+A + P LF+ ++N T++ L F +G IK ++ + TG+
Sbjct: 220 QAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGLIKCCEIIRDWKTGE 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRG 201
YAFIE+E E D AY D ID RR+ VD +S + W + +
Sbjct: 280 SLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVSKIKWKGKGGKYTKDDFKAY 339
Query: 202 GPDVNLKHS-GREDNERERERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKR 260
D++ K +D + ++ R E + R +DRE+ RER+R ER
Sbjct: 340 EKDLDNKAKLALKDKVKSKQDSRYELLLDEDEDDGR----KDDREK-RERKRHSDSER-- 392
Query: 261 RTSRSRSRDR-RRRRSRERIRDDDIEEVEFRPKDRS---DRDRDRDRKR-RRERENS 312
T RS+DR RR +++ R R KD+ RDRD D KR RRER S
Sbjct: 393 -TKDKRSKDRDESRREKDKSRQRSRSRDRERQKDKQRERGRDRDGDHKRHRRERSRS 448
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L + + D LR FE YGP+K + + N TG+PRG+ F++Y H D A +
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQL 109
Query: 164 DGKKIDGRRVLV 175
+ I GR + +
Sbjct: 110 NHTIIGGREIRI 121
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ + D LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDKKWICGRQIEI 83
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ + D LRREF YGPI + + + T +PRG+A++++E RD A
Sbjct: 8 PNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDKKWICGRQIEI 83
>gi|389636494|ref|XP_003715897.1| peptidyl-prolyl cis-trans isomerase-like 4 [Magnaporthe oryzae
70-15]
gi|351641716|gb|EHA49578.1| peptidyl-prolyl cis-trans isomerase-like 4 [Magnaporthe oryzae
70-15]
gi|440471210|gb|ELQ40241.1| peptidyl-prolyl cis-trans isomerase cyp6 [Magnaporthe oryzae Y34]
gi|440490712|gb|ELQ70239.1| peptidyl-prolyl cis-trans isomerase cyp6 [Magnaporthe oryzae P131]
Length = 505
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKL 118
E R E++RRER + Q + L P A + P + LF+ ++N T ++ L
Sbjct: 219 EDRAAAAEKQRREREAKA-----QALTLEMMGDLPFAEVKPPENVLFVCKLNPVTQDADL 273
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G I ++ + TG YAFIE+E + +AY G ID RR+ VD
Sbjct: 274 ELIFSRFGKILSCEVIRDSKTGDSLQYAFIEFEDKAACETAYFKMQGVLIDDRRIHVDFS 333
Query: 179 RSRT 182
+S +
Sbjct: 334 QSVS 337
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
AT + +L++A ++ +S LR FE YG I+K +V + +T + RG+AF+ Y++ +D
Sbjct: 102 ATNNQGSSLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQD 161
Query: 156 MHSAYKHADGKKIDGRRVLVDVERSRTVK 184
+ +G + G+ + VE+S+ +K
Sbjct: 162 AEDSLSKLNGYDLLGKEIR--VEKSKRLK 188
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 55 PPTRVETREERLERR-RRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDT 113
P T+V+ E ER + A++V++ E + + W +F+ + Y+
Sbjct: 3 PLTKVKLINELNEREVQLGVADKVSWHSEYKDSAW---------------IFLGGLPYEL 47
Query: 114 SESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 173
+E + F YG I I +V +K TGK +G+ F+ YE +R A + +G KI GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 174 LVD 176
VD
Sbjct: 108 RVD 110
>gi|154301711|ref|XP_001551267.1| hypothetical protein BC1G_10007 [Botryotinia fuckeliana B05.10]
gi|347828519|emb|CCD44216.1| hypothetical protein [Botryotinia fuckeliana]
Length = 459
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +G I ++ +K TG YAFIEYE E+ A
Sbjct: 246 PENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYEDEKSCEQA 305
Query: 160 YKHADGKKIDGRRVLVDVERSRT 182
Y G ID R+ VD +S +
Sbjct: 306 YFKMQGVLIDDHRIHVDFSQSVS 328
>gi|388854907|emb|CCF51410.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Ustilago hordei]
Length = 557
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 99/243 (40%), Gaps = 35/243 (14%)
Query: 67 ERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVY 125
E RR+ A LE P A + P LF+ ++N T L F +
Sbjct: 233 ESRRKADTNAAALTLEM------VGDLPFAEIRPPENILFVCKLNPVTRSDDLELIFSRF 286
Query: 126 GPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER--SRTV 183
G I ++ +K TG YAFIE++ + D AY +D RR+ VD + SR
Sbjct: 287 GKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKMQNVLVDDRRIWVDFSQSVSRLH 346
Query: 184 KGWLPRRLGG--------GLGG--------TRRGGPDVNLKHSGREDNERER--ERYRLE 225
W+ +R GG GG + G + G ++ ER R ERY E
Sbjct: 347 GDWVRKRNGGREAPKGHYKWGGEGRRDDGQSNSGADSYRPRAGGYQNGERWRDGERYG-E 405
Query: 226 RERELAGGPPRARSGSNDRERERERRRSRSRE------RKRRTSRSRSRDRRRRRSRERI 279
R G R R+G D++R+R +RSR + R RTS R R + I
Sbjct: 406 RSSRRDEGDRRHRNG-EDQDRDRAYKRSRRHDEGTESRRDGRTSAISQRHSDDRSGKHSI 464
Query: 280 RDD 282
RDD
Sbjct: 465 RDD 467
>gi|324511081|gb|ADY44625.1| Peptidyl-prolyl cis-trans isomerase-like protein 4 [Ascaris suum]
Length = 430
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +G IK ++ ++ TG YAFIE+E E+ +A
Sbjct: 238 PENVLFVCKLNPVTTDEDLEIIFSRFGAIKCCEVIRDRRTGASLQYAFIEFEDEKSCENA 297
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y D +D RR+ VD +S
Sbjct: 298 YFKMDNVLVDDRRIHVDFSQS 318
>gi|402226623|gb|EJU06683.1| cyclophilin-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 490
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 59 VETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESK 117
+E E+ E++RRE A + A L E+ P A + P LF+ ++N T +
Sbjct: 209 LELPEDEAEKQRREAAAK-ASALTLEMV----GDLPFANVRPPENVLFVCKLNSVTRDED 263
Query: 118 LRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 177
L F +G I ++ +K TG YAFIE++ D AY +D RR+ VD
Sbjct: 264 LELIFSRFGKIMSCQVIRDKKTGDSLQYAFIEFDKREDAEQAYFKMQNVLVDDRRIWVDF 323
Query: 178 ERS 180
+S
Sbjct: 324 SQS 326
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+EYE RD A K
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSVWVARN-----PPGFAFVEYEDARDAEDAVKGM 70
Query: 164 DGKKIDGRRVLVDVE 178
DGK + G RV V++
Sbjct: 71 DGKVLCGARVRVELS 85
>gi|353239800|emb|CCA71696.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Piriformospora indica DSM 11827]
Length = 421
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 69 RRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPI 128
RR+ AE A LE L N P P LF+ ++N T++ L F +G I
Sbjct: 195 RRKRAAEASALTLEMVGDLPFANVRP-----PENVLFVCKLNPVTTDEDLELIFSQHGKI 249
Query: 129 KKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
++ +K TG YAFIE++ +D AY ID RR+ VD +S
Sbjct: 250 MSCQIIRDKRTGDSLQYAFIEFDRRQDAEQAYFKMQSVLIDDRRIWVDFSQS 301
>gi|116197367|ref|XP_001224495.1| hypothetical protein CHGG_06839 [Chaetomium globosum CBS 148.51]
gi|88178118|gb|EAQ85586.1| hypothetical protein CHGG_06839 [Chaetomium globosum CBS 148.51]
Length = 506
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +G I ++ ++ TG YAFIE+E ++ A
Sbjct: 251 PENVLFVCKLNPVTTDDDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDQKSCEDA 310
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y D ID RR+ VD +S
Sbjct: 311 YSKMDSVLIDDRRIHVDFSQS 331
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + +S+L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 4 VYVGNLGTGAGKSELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 58
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V+V +PRR
Sbjct: 59 DGKVICGSRVRVEVSTG------MPRR 79
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+FI +NY+ +E + F YG + I M K TGK RG+AF+ YE +R A +
Sbjct: 34 IFIGGLNYELTEGDVITVFSQYGEVVDIDMPREKSTGKRRGFAFLMYEDQRSTVLAVDNL 93
Query: 164 DGKKIDGRRVLVD 176
+G ++ GR + VD
Sbjct: 94 NGAELAGRTLRVD 106
>gi|145497477|ref|XP_001434727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401855|emb|CAK67330.1| unnamed protein product [Paramecium tetraurelia]
Length = 686
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKL 118
E E+ L++ ++ +A++ A LE L D P+A M P L++ ++N T E L
Sbjct: 188 EDEEQLLQKTKQHQAKKRAVTLE---MLGD---LPDADMKPPENVLYVCKLNPITEEKDL 241
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G IK +V + TG YAFIE+E AY + ID RR+ VD
Sbjct: 242 EVIFSKFGLIKNCEVVRDWKTGSSLQYAFIEFETIAACEEAYMKMENVIIDERRIHVDFC 301
Query: 179 RS 180
+S
Sbjct: 302 QS 303
>gi|424513420|emb|CCO66042.1| unnamed protein product [Bathycoccus prasinos]
Length = 479
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 60 ETREERLERRRRER-AEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKL 118
E E LE++ RE+ A A LE L D ++ P P ++LF+ ++N T++ L
Sbjct: 219 EMDEIELEKKSREQEARSRAVVLEMIGDLPDVDAKP-----PDESLFVCKLNPVTTDEDL 273
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G + ++ ++ TG YAFI +E + +AY D ID RR+ VD
Sbjct: 274 EIIFSRFGKVTSCDVIRDRRTGDSLCYAFINFETKEMCEAAYFKMDNALIDDRRIHVDF- 332
Query: 179 RSRTVKG-WLPRRLGGGLGGT 198
S+++ G W R G GGT
Sbjct: 333 -SQSMHGLWKNFRKFGKKGGT 352
>gi|297847776|ref|XP_002891769.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
gi|297337611|gb|EFH68028.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 95/243 (39%), Gaps = 24/243 (9%)
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMD-PFKTLFIARVNYDTS 114
P E + LE RE+A + L P A + P LF+ ++N T
Sbjct: 201 PMDEELGVQELEEVIREKAAH-----SSAVVLESIGDIPEAEVKPPDNVLFVCKLNPVTE 255
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
+ L F +G + ++ + TG YAFIE+E++ AY D ID RR+
Sbjct: 256 DEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFENKEACEQAYFKMDNALIDDRRIH 315
Query: 175 VDVERSRTVKGWLPRRL-----GGGLGGTRRGGPDVNLKHS--GRE-------DNERER- 219
VD +S + K W R G G G + G D K G + D R+
Sbjct: 316 VDFSQSVS-KLWSQFRQKDSQKGKGNGCFKCGSTDHIAKDCVGGNQPSKFIVKDQNRQHG 374
Query: 220 --ERYRLERERELAGGPPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRE 277
E Y + E ++ P R S +R + +RR +R R D RR+ RE
Sbjct: 375 GGEGYDMVFEGDVPEIPKREHSHERERSEKIQRRSPHGNGEGKRRHRDEVDDGRRQHDRE 434
Query: 278 RIR 280
R
Sbjct: 435 DAR 437
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+EYE RD A K
Sbjct: 17 VYVGDLGNGAAKGELERAFSYYGPLRSVWVARN-----PPGFAFVEYEDPRDAEDATKGM 71
Query: 164 DGKKIDGRRVLVDVE 178
DGK + G R+ V++
Sbjct: 72 DGKVLCGSRIRVELS 86
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 46 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 100
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V+V +PRR
Sbjct: 101 DGKVICGSRVRVEVSTG------MPRR 121
>gi|449549425|gb|EMD40390.1| hypothetical protein CERSUDRAFT_110996 [Ceriporiopsis subvermispora
B]
Length = 466
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 44 LNEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFK 102
+ E EDP T P EE E+ RR++A A L E+ P A + P
Sbjct: 199 IAEDEDPLATLP-------EEEAEKERRQKA-AAASALTLEMV----GDLPFANVRPPEN 246
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
LF+ ++N T + L F +G I ++ +K TG YAFIE++ D AY
Sbjct: 247 VLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKRTGDSLQYAFIEFDKREDAEQAYFK 306
Query: 163 ADGKKIDGRRVLVDVERS 180
+D RR+ VD +S
Sbjct: 307 MQNVLVDDRRIWVDFSQS 324
>gi|313212785|emb|CBY36708.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A +P K LF+ ++N T++ L F +G IK ++ ++ T + YAFIE+
Sbjct: 175 LPSADCEPDKNVLFVCKLNPITTDEDLELIFSRFGDIKTAEIIRDRRTNQSLQYAFIEFA 234
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
+ D AY D ID RR+ VD +S K W
Sbjct: 235 TDDDCERAYFKMDNVLIDDRRIHVDFSQS-VAKKW 268
>gi|348523061|ref|XP_003449042.1| PREDICTED: hypothetical protein LOC100708809 [Oreochromis
niloticus]
Length = 240
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+E+E RD A K
Sbjct: 18 VYVGDLGNGAAKGELERAFSYYGPLRSVWVARN-----PPGFAFVEFEDPRDAEDAVKGM 72
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
DGK + G RV V++ + KG
Sbjct: 73 DGKVLCGSRVRVEMSTGLSRKG 94
>gi|13539605|emb|CAC35733.1| cyclophilin-RNA interacting protein [Paramecium tetraurelia]
Length = 695
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKL 118
E E+ L++ ++ +A++ A LE L D P+A M P L++ ++N T E L
Sbjct: 188 EDEEQLLQKTKQHQAKKRAVTLE---MLGD---LPDADMKPPENVLYVCKLNPITEEKDL 241
Query: 119 RREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
F +G IK +V + TG YAFIE+E AY + ID RR+ VD
Sbjct: 242 EVIFSKFGLIKNCEVVRDWKTGSSLQYAFIEFETIAACEEAYMKMENVIIDERRIHVDFC 301
Query: 179 RS 180
+S
Sbjct: 302 QS 303
>gi|159478463|ref|XP_001697322.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Chlamydomonas reinhardtii]
gi|158274480|gb|EDP00262.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Chlamydomonas reinhardtii]
Length = 510
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 6 PPNLLALFAPRDPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREER 65
PP L AL P P P ++L + H +DT P VE R
Sbjct: 169 PPELEALIPPASPPPEFGEGDRLEDDWVPH---------------EDTRPAEEVEAESRR 213
Query: 66 LERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVY 125
E R A LE L D ++ P M LFI ++N TSE L F +
Sbjct: 214 AEAHHR------AVVLEMVGDLPDADAKPPPNM-----LFICKLNPVTSEEDLEIIFSRF 262
Query: 126 GPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
G + ++ + TG Y FI ++ + +AY + ID RRV VD +S
Sbjct: 263 GHVTSCDIIRDFKTGDSLNYGFIGFDSDEACEAAYFKMNNAVIDDRRVRVDFSQS 317
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + TS L F+ YG + I + ++ TG+ RG+AF+ Y++ + A +
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 163 ADGKKIDGRRVLV 175
DG+++DGR ++V
Sbjct: 77 LDGREVDGRHIVV 89
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDTRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVE 178
DGK I G RV V++
Sbjct: 68 DGKVICGSRVRVELS 82
>gi|340939091|gb|EGS19713.1| peptidyl-prolyl cis-trans isomerase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 507
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +G I ++ ++ TG YAFIE+E ++ A
Sbjct: 253 PENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDRKTGDSLQYAFIEFEDKKSCEEA 312
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y DG ID RR+ VD +S
Sbjct: 313 YFKMDGVLIDDRRIHVDFSQS 333
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 104 LFIARVNYDTSESKLRREFEVYGP-IKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
L++ ++Y T+E LR FE G ++ + ++ ++ TG+ RG+AF++ E A +
Sbjct: 5 LYVGNLSYSTTEEALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAAREAMES 64
Query: 163 ADGKKIDGRRVLVDVERSRTVKG 185
DG+++DGR++ + R R G
Sbjct: 65 LDGRELDGRQMRITEARERERGG 87
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + T+ L FE YG + I + ++ TG RG+AF+ Y++E + A
Sbjct: 17 SLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRVVDGREIMVQFAK 93
>gi|341876847|gb|EGT32782.1| CBN-SIG-7 protein [Caenorhabditis brenneri]
Length = 428
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 67 ERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYG 126
E ++RE AEQ A LE L D + P P LF+ ++N T++ L F +G
Sbjct: 212 EFQQREMAEQ-AQILEMVGDLRDADEVP-----PENVLFVCKLNPVTTDEDLEIIFSRFG 265
Query: 127 PIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
I +V ++ +G YAFIE+++ + AY + ID RR+ VD +S
Sbjct: 266 KINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAYFKMENVLIDDRRIHVDFSQS 319
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V+V +PRR
Sbjct: 68 DGKVICGSRVRVEVSTG------MPRR 88
>gi|22330231|ref|NP_175776.2| cyclophilin 59 [Arabidopsis thaliana]
gi|45680880|gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Arabidopsis thaliana]
gi|332194868|gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana]
Length = 506
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 30/245 (12%)
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMD-PFKTLFIARVNYDTS 114
P E + LE RE+A + + L P A + P LF+ ++N T
Sbjct: 201 PMDEELGAQELEEVIREKAAHSS-----AVVLESIGDIPEAEVKPPDNVLFVCKLNPVTE 255
Query: 115 ESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
+ L F +G + ++ + TG YAFIE+E++ AY D ID RR+
Sbjct: 256 DEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFENKESCEQAYFKMDNALIDDRRIH 315
Query: 175 VDVERSRTVKGWLPRRL-----GGGLGGTRRGGPDVNLKHSGREDNERERERYRL-ERER 228
VD +S + K W R G G G + G D H ++ ++ + ++ R
Sbjct: 316 VDFSQSVS-KLWSQFRQKDSQKGKGNGCFKCGSTD----HIAKDCVGGPSSKFIVKDQNR 370
Query: 229 ELAGG-------------PPRARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRS 275
+ GG P+ S +R + +RR +R R D RR+
Sbjct: 371 QHGGGEGYEMVFEGDVHETPKHNSHERERSEKIQRRSPHGNGEGKRQHRDERDDGRRQHD 430
Query: 276 RERIR 280
RE R
Sbjct: 431 REDAR 435
>gi|322797592|gb|EFZ19633.1| hypothetical protein SINV_07432 [Solenopsis invicta]
Length = 508
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T EE +E ++ + A+ A LE + D + P P LF+ ++N T++ L
Sbjct: 222 TAEEIIELQKNKEAKARATILEIVGDIPDADIAP-----PENVLFVCKLNPVTNDDDLEI 276
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +G I ++ + TG YAFIE+ + AY D ID RR+ VD +S
Sbjct: 277 IFSRFGKIVGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKMDNVLIDDRRIHVDFSQS 336
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERER-ERYRLERERELAGGPPRARS 239
W R G G +K+ +D ++R E Y R+RE +
Sbjct: 337 VAKMRW--RGKGKG------------IKYLDEDDRAKKREENYFSSRKREAS-------- 374
Query: 240 GSNDRERERERRRSRSRERKRRTSRSRSRDRRR 272
R+R+R+ + R R++ + + RS + R+
Sbjct: 375 ----RDRDRDNGKGRDEGRRKESDKDRSSEHRK 403
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+E+E RD A K
Sbjct: 18 VYVGDLGNGAAKGELERAFSYYGPLRSVWVARN-----PPGFAFVEFEDPRDAEDAVKGM 72
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
DGK + G RV V++ + KG
Sbjct: 73 DGKLLCGSRVRVEMSTGLSRKG 94
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 91 NSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEY 150
N PN + TL + V Y++S LRR FE YG + + M + TG+PRG+AF+ +
Sbjct: 18 NGPPNI--EGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRF 75
Query: 151 EHERDMHSAYKHADGKKIDGRRVLVDVERSR 181
+RD A DG+ GR + + + R
Sbjct: 76 MDQRDADDAIDRMDGEFFAGRELRIQYAKKR 106
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ ++ ++ LRREF YGPI + + + T +PRG+A+I++E RD A
Sbjct: 8 PNTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
D K + GR++ +
Sbjct: 68 LHSLDRKWVCGRQIEI 83
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 3 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 57
Query: 164 DGKKIDGRRVLVDVE 178
DGK I G RV V++
Sbjct: 58 DGKVICGSRVRVELS 72
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER-------SRTVKGWLPRRLG-GGLG 196
RD A DG +DGR + V + R + +G PRR G GG G
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSGGYG 116
>gi|307166099|gb|EFN60351.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Camponotus floridanus]
Length = 490
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 30/279 (10%)
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T EE E ++ + A+ A LE + D + P P LF+ ++N T++ L
Sbjct: 204 TIEELTENQKAKEAKARATILEIVGDIPDADIAP-----PENVLFVCKLNPVTTDDDLEI 258
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +G I ++ + TG YAFIE+ + AY D ID RR+ VD +S
Sbjct: 259 IFSRFGKIIGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKMDNVLIDDRRIHVDFSQS 318
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSG 240
W R G G+ ++++++R+ Y ++ E + R R+
Sbjct: 319 VAKMRW--RGKGKGI--------------RYFDEDDKKRDNYSFLKKPETS----RERNN 358
Query: 241 SNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRD 300
N ++RE +R+ SR+ R+ R + +R+ R R ++ + ++R DRD++
Sbjct: 359 DNGKDREDGKRKESSRKDHRKYERRKEDKDKRKEDRSYDRYENERRDRRKKEERRDRDKE 418
Query: 301 RDRKRRRERENSEDRNERKRDRKERRKERERNNEEREEK 339
R R+ SEDR+ER+ R E R ++EER E+
Sbjct: 419 DQR-----RDYSEDRSERRNRRDENNDWRRDHSEERLER 452
>gi|307196041|gb|EFN77766.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Harpegnathos saltator]
Length = 451
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T EE LE ++ + A+ A LE + D + P P LF+ ++N T++ L
Sbjct: 204 TTEEILEMQKDKEAKTRATILEIVGDIPDADIAP-----PENVLFVCKLNPVTNDDDLEI 258
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +G I ++ + TG YAFIE+ + AY D ID RR+ VD +S
Sbjct: 259 IFNRFGKIIGCEVIRDHQTGDSLQYAFIEFADRKSCEEAYFKMDNVLIDDRRIHVDFSQS 318
Query: 181 RTVKGW 186
W
Sbjct: 319 VAKMRW 324
>gi|406867175|gb|EKD20214.1| RNA binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 550
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFK-TLFIARVNYDTSESKLRREF 122
E +E++RRER + Q + L P A + P + LF+ ++N T++ L F
Sbjct: 316 EAVEKQRREREARA-----QALTLEMVGDLPFAEVKPPENVLFVCKLNPVTTDEDLELIF 370
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+G I ++ +K T YAFIEY + AY G ID R+ VD +S
Sbjct: 371 SRFGTILSCEVIRDKRTNDSLQYAFIEYSEQTSCEQAYFKMQGVLIDDHRIHVDFSQS 428
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ ++ ++ LRREF YGPI + + + T +PRG+A+I++E RD A
Sbjct: 8 PNTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
D K + GR++ +
Sbjct: 68 LHSLDRKWVCGRQIEI 83
>gi|66801303|ref|XP_629577.1| hypothetical protein DDB_G0292710 [Dictyostelium discoideum AX4]
gi|60462961|gb|EAL61158.1| hypothetical protein DDB_G0292710 [Dictyostelium discoideum AX4]
Length = 489
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T L F G +K +V +KVT YAF+EY + + A
Sbjct: 241 PDHVLFVCKLNPITEAEDLELVFSQCGTVKSCEVVRDKVTNDSLCYAFVEYSTKEECEKA 300
Query: 160 YKHADGKKIDGRRVLVDVERS--------RTVKGWLPRRLGGG 194
Y + ID RR+ VD +S ++K +L R GG
Sbjct: 301 YLKLENILIDERRIHVDFCQSVAKVRNNQNSLKNFLTRGKGGS 343
>gi|350407880|ref|XP_003488226.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Bombus
impatiens]
Length = 502
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 31/165 (18%)
Query: 47 FEDPKD------TPPP------------------TRVETREERLERRRRERAEQVAYKLE 82
FEDPK +PPP T T EE E ++ + A+ A LE
Sbjct: 166 FEDPKGFIIPDRSPPPSKEVLMSDRIGADEVIDDTAGMTAEEITEMQKEKEAKARATILE 225
Query: 83 QEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGK 141
P+A M P LF+ ++N T++ L F +G I ++ ++ TG
Sbjct: 226 I------VGDIPDAEMAPPENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDRQTGD 279
Query: 142 PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
YAFIE+ + AY D ID RR+ VD +S W
Sbjct: 280 SLQYAFIEFADRKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRW 324
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + YD SE + F YG + +V +K TGK RG+AF++YE +R A +
Sbjct: 35 IYIGGLPYDLSEGDVVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G + GR + VD
Sbjct: 95 GGATVLGRMLRVD 107
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ + D LRREF YGPI + + + +PRG+A++++E RD A
Sbjct: 8 PNSSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K I GR++ +
Sbjct: 68 LHNLDKKWICGRQIEI 83
>gi|156545479|ref|XP_001606947.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Nasonia
vitripennis]
Length = 501
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 23/161 (14%)
Query: 47 FEDPKDT------PPPTRVETREERLERRRRERAEQVAYKLEQEIA-------------- 86
+EDPK P PT+ +R+ E + A +EIA
Sbjct: 166 YEDPKGLEVPDRSPEPTKEALMSDRI--GADEAIDDTAGMTAEEIAEMQKEKEAKARATI 223
Query: 87 LWDPNSFPNATMD-PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGY 145
L P+A M P LF+ ++N TS+ L F +G I ++ ++ TG Y
Sbjct: 224 LEIVGDIPDAEMAPPENVLFVCKLNPVTSDDDLEVIFSRFGKIVGCEVIRDRQTGDSLQY 283
Query: 146 AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
AFIE+ + AY D ID RR+ VD +S W
Sbjct: 284 AFIEFAERKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRW 324
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 75/205 (36%), Gaps = 52/205 (25%)
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDP-FKTLFIARVNYDTSESKLR 119
T EE E ++ + A+ A LE P+A M P LF+ ++N TS+ L
Sbjct: 204 TAEEIAEMQKEKEAKARATILEI------VGDIPDAEMAPPENVLFVCKLNPVTSDDDLE 257
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
F +G I ++ ++ TG YAFIE+ + AY D ID RR+ VD +
Sbjct: 258 VIFSRFGKIVGCEVIRDRQTGDSLQYAFIEFAERKSCEEAYFKMDNVLIDDRRIHVDFSQ 317
Query: 180 SRTVKGWLPRRLGGGL---------------GGT-----------RRGGPDVN------- 206
S W R G G+ G RR P +
Sbjct: 318 SVAKMRW--RGKGKGIKYFDEENKEEKKANNAGNNRPRDDKRNRERRRSPFASPKRERNR 375
Query: 207 ----------LKHSGREDNERERER 221
+K + +ER RER
Sbjct: 376 RKSRSRSRERVKEKKEKSSERSRER 400
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + TS L F+ YG + I + ++ TG+ RG+AF+ Y++ + A +
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIER 76
Query: 163 ADGKKIDGRRVLV 175
DG+ +DGR ++V
Sbjct: 77 LDGRAVDGRNIVV 89
>gi|313227010|emb|CBY22157.1| unnamed protein product [Oikopleura dioica]
Length = 434
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A +P K LF+ ++N T++ L F +G IK ++ ++ T + YAFIE+
Sbjct: 235 LPSADCEPDKNVLFVCKLNPITTDEDLELIFSRFGDIKTAEIIRDRRTNQSLQYAFIEFA 294
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
+ D AY D ID RR+ VD +S K W
Sbjct: 295 TDDDCERAYFKMDNVLIDDRRIHVDFSQS-VAKKW 328
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + G P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV-----WIAGNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|47224788|emb|CAG06358.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+E+E RD A K
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRTVWVARN-----PPGFAFVEFEDPRDAEDAVKGM 70
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
DGK + G RV V++ + KG
Sbjct: 71 DGKLLCGSRVRVEMSTGLSRKG 92
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +L + + D LR +FE YG +K + + + T +PRG+ F+E++ RD A
Sbjct: 15 PRVSLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDA 74
Query: 160 YKHADGKKIDGRRVLVDVER 179
D I+GR + V R
Sbjct: 75 MYSLDRSTINGREISVTFSR 94
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + D E +L R F YGP+K + + N P G+AF+E+E RD + +
Sbjct: 32 VYVGDLPRDAQEKELERAFSYYGPLKSVWVARN-----PPGFAFVEFEDPRDADDSVRGL 86
Query: 164 DGKKIDGRRVLVDVERSRT-VKGWL 187
DG + G RV V++ + K W+
Sbjct: 87 DGSSLCGTRVRVELSTGKVRPKPWM 111
>gi|443714454|gb|ELU06855.1| hypothetical protein CAPTEDRAFT_164776 [Capitella teleta]
Length = 196
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + + +L +EFE +GPI + + N P G+AF+ Y+H D A K
Sbjct: 14 VFVGELGSRAGKYELEKEFEYFGPIVDVWVARN-----PPGFAFVVYKHSADAKKAVKEL 68
Query: 164 DGKKIDGRRVLVDVER 179
DG+ I GRRV V++ R
Sbjct: 69 DGRMICGRRVRVELAR 84
>gi|408392184|gb|EKJ71543.1| hypothetical protein FPSE_08284 [Fusarium pseudograminearum CS3096]
Length = 485
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 50 PKDTPPPTRVETREERL------------ERRRRERAEQVAYKLEQEIALWDPNSFPNAT 97
P +PPPT + + R+ + ER + Q + L P A
Sbjct: 186 PSASPPPTNQQLKTVRIADEAALHEDDNVDEEELERRRRNREAQAQALTLEMMGDLPFAE 245
Query: 98 MDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+ P + LF+ ++N T + L F +G I ++ ++ TG YAFIEYE +
Sbjct: 246 VKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASC 305
Query: 157 HSAYKHADGKKIDGRRVLVDVERSRT 182
+AY G ID RR+ VD +S +
Sbjct: 306 EAAYFKMQGVLIDDRRIHVDFSQSVS 331
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 PNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIE 149
PN P + P + L++ ++++ +E LR FE +G I I ++ + TGK +GY F+
Sbjct: 269 PNLAPKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLT 327
Query: 150 YEHERDMHSAYKHADGKKIDGR 171
+ H D A + +G ++ GR
Sbjct: 328 FHHATDAKKAMEQLNGFELAGR 349
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus rotundus]
Length = 235
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|410910550|ref|XP_003968753.1| PREDICTED: uncharacterized protein LOC101078845 [Takifugu rubripes]
Length = 222
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+E+E RD A K
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRTVWVARN-----PPGFAFVEFEDPRDAEDAVKGM 70
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
DGK + G RV V++ + KG
Sbjct: 71 DGKLLCGSRVRVEMSTGLSRKG 92
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P + +L I ++Y T LRR+F YG I + + +K G+ RG+AF+ + +
Sbjct: 5 PPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDK 63
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ IDGR + VD R
Sbjct: 64 RDAGDAIDQLDGRDIDGREIRVDYAR 89
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P + +L I ++Y T LRR+F YG I + + +K G+ RG+AF+ + +
Sbjct: 5 PPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDK 63
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ IDGR + VD R
Sbjct: 64 RDAGDAIDQLDGRDIDGREIRVDYAR 89
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + Y TS L R F+ YG + I + ++ T + RG+AF+ Y ERD A
Sbjct: 19 SLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYYEERDAEDAMDS 78
Query: 163 ADGKKIDGRRVLVDVER 179
DGK IDGR + V + R
Sbjct: 79 MDGKVIDGREIRVAMAR 95
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 235
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLETGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVQGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ LPRR
Sbjct: 68 DGKVICGSRVRVELSTG------LPRR 88
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAILDGRELRVQMAR 91
>gi|410516920|sp|Q4IE79.2|PPIL4_GIBZE RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
Length = 485
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 50 PKDTPPPTRVETREERL------------ERRRRERAEQVAYKLEQEIALWDPNSFPNAT 97
P +PPPT + + R+ + ER + Q + L P A
Sbjct: 186 PSTSPPPTDQQLKTVRIADEAALHEDDNVDEEELERRRRNREAQAQALTLEMMGDLPFAE 245
Query: 98 MDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
+ P + LF+ ++N T + L F +G I ++ ++ TG YAFIEYE +
Sbjct: 246 VKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASC 305
Query: 157 HSAYKHADGKKIDGRRVLVDVERSRT 182
+AY G ID RR+ VD +S +
Sbjct: 306 EAAYFKMQGVLIDDRRIHVDFSQSVS 331
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
LF+ + ++ L REF+ YGPI + + N P G+AF+ Y + D A +
Sbjct: 14 LFVGDIGTRVGKNDLEREFDRYGPITDVWVARN-----PPGFAFVVYMYREDADKAVRSL 68
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DG+ + GRRV VE +R G P R
Sbjct: 69 DGRLMCGRRVR--VEHARPYPGVPPPR 93
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDTRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Papio
anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing factor,
arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d [Homo
sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDTRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAILDGRELRVQMAR 91
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+EYE RD A K
Sbjct: 17 VYVGDLGNGAAKGELERAFNYYGPLRSVWVARN-----PPGFAFVEYEDPRDAEDATKGM 71
Query: 164 DGKKIDGRRVLVDVE 178
DGK + G R+ V++
Sbjct: 72 DGKVLCGARIRVELS 86
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 42 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 96
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 97 DGKVICGSRVRVELSTG------MPRR 117
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 97 TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
T+D +L + + Y T+ L+R FE YG + + + + T + RG+AF+ + +RD
Sbjct: 9 TIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDC 68
Query: 157 HSAYKHADGKKIDGRRVLVDVER 179
A DG +DGR + V + R
Sbjct: 69 EDAMDALDGYMMDGRELRVQMAR 91
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
Length = 239
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Sarcophilus
harrisii]
Length = 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLETGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVQGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ LPRR
Sbjct: 68 DGKVICGSRVRVELSTG------LPRR 88
>gi|393228064|gb|EJD35721.1| cyclophilin-like protein [Auricularia delicata TFB-10046 SS5]
Length = 427
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ +K TG YAFIE++ D A
Sbjct: 241 PENVLFVCKLNPATRDEDLELIFSRFGRIMSCQVIRDKKTGDSLQYAFIEFDQRADAEQA 300
Query: 160 YKHADGKKIDGRRVLVDVERS--RTVKGW 186
Y ID +R+ VD +S RT GW
Sbjct: 301 YFKMQNVLIDDKRIWVDFSQSVARTNTGW 329
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 41 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 95
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 96 DGKVICGSRVRVELSTG------MPRR 116
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVE 178
DGK I G RV V++
Sbjct: 68 DGKVICGSRVRVELS 82
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P A P + L++ ++++ +E LR FE +G I I ++ + TG+ +GY FI Y +
Sbjct: 351 PKAHTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 409
Query: 154 RDMHSAYKHADGKKIDGR 171
D A + +G ++ GR
Sbjct: 410 DDAKKALEQLNGFELAGR 427
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Cricetulus
griseus]
Length = 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 5 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 59
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 60 DGKVICGSRVRVELSTG------MPRR 80
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + Y+ SE + F YG + +V +K TGK +G+AF++YE +R A +
Sbjct: 35 VYIGGLPYEVSEGDIVTIFSQYGEPVYVNLVRDKETGKSKGFAFLKYEDQRSCDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
G K+ GR + VD R + +G
Sbjct: 95 SGAKVMGRIISVDHTRYKKKEG 116
>gi|426192602|gb|EKV42538.1| hypothetical protein AGABI2DRAFT_195839 [Agaricus bisporus var.
bisporus H97]
Length = 448
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ +K TG YAFIE++ D A
Sbjct: 253 PENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDKRDDAEQA 312
Query: 160 YKHADGKKIDGRRVLVDVERS--RTVKGWL-------PRRLGGGLGG 197
Y +D RR+ VD +S R W P R+G G GG
Sbjct: 313 YFKMQNVLVDDRRIWVDFSQSVARMNNQWSNDIKRGKPSRVGEGFGG 359
>gi|399216253|emb|CCF72941.1| unnamed protein product [Babesia microti strain RI]
Length = 277
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 64 ERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMD-PFKTLFIARVNYDTSESKLRREF 122
E LER + A A LE L D PNA P LF+ ++N T L+ F
Sbjct: 39 EALERIKEREARSRAVTLE---ILGD---LPNADAKPPNNVLFVCKLNSVTEAEDLKIIF 92
Query: 123 EVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+G I +V + TG+ YAFIE+E E AY + ID RR+ VD +S
Sbjct: 93 SRFGTILSCNVVKDYKTGESLQYAFIEFEKEESCTDAYFKMENVLIDDRRIHVDFCQS 150
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 233
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 2 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 56
Query: 164 DGKKIDGRRVLVDVE 178
DGK I G RV V++
Sbjct: 57 DGKVICGSRVRVELS 71
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+EYE RD A K
Sbjct: 17 VYVGDLGNGAAKGELERAFNYYGPLRSVWVARN-----PPGFAFVEYEDPRDAEDATKGM 71
Query: 164 DGKKIDGRRVLVDVE 178
DGK + G R+ V++
Sbjct: 72 DGKVLCGARIRVELS 86
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Canis
lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like [Ailuropoda
melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Felis
catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|367026289|ref|XP_003662429.1| hypothetical protein MYCTH_2303035 [Myceliophthora thermophila ATCC
42464]
gi|347009697|gb|AEO57184.1| hypothetical protein MYCTH_2303035 [Myceliophthora thermophila ATCC
42464]
Length = 507
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +G I ++ + TG YAFIE+E + A
Sbjct: 251 PENVLFVCKLNPITTDEDLELIFSRFGKILSCEVIRDAKTGDSLQYAFIEFEDRKSCEEA 310
Query: 160 YKHADGKKIDGRRVLVDVER--SRTVKGW 186
Y D ID RR+ VD + SR + W
Sbjct: 311 YSKMDQVLIDDRRIHVDFSQSVSRLSQAW 339
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S+ +L F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNVWVARN-----PPGFAFVEFEDARDAEDAIRGL 64
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
DG+ I GRR V++ ++ G
Sbjct: 65 DGRTICGRRARVEMSNGKSGSG 86
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 15 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 69
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 70 DGKVICGSRVRVELSTG------MPRR 90
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S+ +L F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNVWVARN-----PPGFAFVEFEDARDAEDAIRGL 64
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
DG+ I GRR V++ ++ G
Sbjct: 65 DGRTICGRRARVEMSNGKSGSG 86
>gi|406859423|gb|EKD12489.1| RNA binding domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 304
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + ++ SE + F +G I ++ +K TGK +G+AF++YE +R A +
Sbjct: 35 IYIGGLPFELSEGDVVTIFSQFGEPTYINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE-------DNE 216
G I GR + VD +R K + G L T+R P+V+ + S R+ D+E
Sbjct: 95 GGTVIMGRTLKVD--HTRYKKKDDEKEEGHDL--TQR-PPEVDEQESRRKRRRTDESDSE 149
Query: 217 RERERYRLERERELA 231
ERER L+ ERELA
Sbjct: 150 SERERPMLKEERELA 164
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|46117274|ref|XP_384655.1| hypothetical protein FG04479.1 [Gibberella zeae PH-1]
Length = 605
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ ++ TG YAFIEYE + +A
Sbjct: 249 PENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASCEAA 308
Query: 160 YKHADGKKIDGRRVLVDVERSRT 182
Y G ID RR+ VD +S +
Sbjct: 309 YFKMQGVLIDDRRIHVDFSQSVS 331
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER-------SRTVKGWLPRRLG-GGLG 196
RD A DG +DGR + V + R + +G PRR G GG G
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSGGYG 116
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + +D SE + F YG I +V +K TGK RG+AF++YE +R A +
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G + GR + VD
Sbjct: 95 GGATVLGRVLRVD 107
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 16 VYVGNLGNSGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDAVREL 70
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 71 DGRTLSGCRVRVELS 85
>gi|348531146|ref|XP_003453071.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Oreochromis niloticus]
Length = 470
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 53 TPPPTRVETREERLERRRRERAEQVAYKLE------------------QEIALWDPNSFP 94
+P PT+ E+L+ R A++V + Q I L P
Sbjct: 178 SPEPTK-----EQLDSGRI-GADEVVNDTDGKGAKELEEKLKEKEAKTQAILLEMVGDLP 231
Query: 95 NATMD-PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
+A + P LF+ ++N T++ L F +G IK ++ + TG YAFIE+E +
Sbjct: 232 DADVKPPENVLFVCKLNPVTTDEDLEIIFSRFGCIKSCEIIRDWKTGDSLCYAFIEFEKQ 291
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERS 180
D AY D ID RR+ VD +S
Sbjct: 292 EDCEKAYFKMDNVLIDDRRIHVDFSQS 318
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 98 MDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
+D +L + + Y T+ LRR F+ YG + + + ++ T + RG+AF+ + +RD
Sbjct: 10 IDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 158 SAYKHADGKKIDGRRVLVDVER 179
A DG +DGR + V + R
Sbjct: 70 DALDSMDGAIMDGRELRVQMAR 91
>gi|209153932|gb|ACI33198.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 223
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+EYE RD A K
Sbjct: 18 VYVGDLGNGAAKGELERAFSYYGPLRTVWVARN-----PPGFAFVEYEDARDAEDAVKGM 72
Query: 164 DGKKIDGRRVLVDVE 178
DGK + G R+ V++
Sbjct: 73 DGKVLCGSRIRVELS 87
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LFI ++ ++ LRREF YGP+ + + + + +PRG+A+I++E RD A
Sbjct: 8 PNTSLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLVDVERS 180
+ D K + GR++ + +
Sbjct: 68 LHNLDRKWVCGRQIEIQFAQG 88
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++S+L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 11 VYVGNLGNNGNKSELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDAVREL 65
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 66 DGRTLCGCRVRVELS 80
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 21 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 75
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 76 DGKVICGSRVRVELSTG------MPRR 96
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|308810142|ref|XP_003082380.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116060848|emb|CAL57326.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 485
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P + LF+ ++N T++ L F +G + ++ + TG GYAF+ +EH + +A
Sbjct: 242 PEEGLFVCKLNPVTTDEDLEIIFSRFGKVLSCDVIRDFKTGASLGYAFVNFEHRHEAEAA 301
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGR------E 213
Y D ID RRV VD +S W + G GGT K S R +
Sbjct: 302 YFKMDNVLIDDRRVHVDFSQSMH-HLWKNFKRFGKNGGTSEDHDAAEGKVSSRGMKRTFQ 360
Query: 214 DNERERERYRLERERELAGGPPRARSGSNDRERERER------RRSRSRERKRRTSRSRS 267
+ R + ++GG + R+R+R++ R R RE KR SR R
Sbjct: 361 GSGRTTFELKSNAMGHISGGNAAMAMAEDKRDRDRDKGRTRDRSRDRDREHKRDRSRDRG 420
Query: 268 R 268
R
Sbjct: 421 R 421
>gi|407925279|gb|EKG18294.1| hypothetical protein MPH_04489 [Macrophomina phaseolina MS6]
Length = 360
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 50 PKDTPPPTRV----------ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMD 99
P ++P PT+ E +E +++ + ER + Q + L P A +
Sbjct: 86 PPESPVPTQAQLATVRIRDDEELDENMDQEQVERLRREREARAQALTLEMMGDLPFAEVK 145
Query: 100 PFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHS 158
P + LF+ ++N T + L F +G I ++ +K TG YAFIE+E ++
Sbjct: 146 PPENVLFVCKLNPVTQDEDLELIFSRFGTILSCEIIRDKQTGDSLQYAFIEFEDKKSCEQ 205
Query: 159 AYKHADGKKIDGRRVLVDVER--SRTVKGW-------LPRRLGGGLGGT 198
AY ID R+ VD + S+ W R GGG GG
Sbjct: 206 AYFKMQDVLIDDHRIHVDFSQSVSKLSNVWRDATNDKRKRAHGGGFGGV 254
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Canis
lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Felis
catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 98 MDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
+D +L + + Y T+ L+R FE YG + + + + T + RG+AF+ + +RD
Sbjct: 10 IDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCE 69
Query: 158 SAYKHADGKKIDGRRVLVDVER 179
A DG +DGR + V + R
Sbjct: 70 DAMDSLDGYILDGRELRVQMAR 91
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 90 PNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIE 149
PN P P + L++ ++++ +E LR FE +G I I ++ + TG+ +GY F+
Sbjct: 258 PNLMPKGQTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLT 316
Query: 150 YEHERDMHSAYKHADGKKIDGRRVLVD--VERSRTVKG 185
+ + D A + +G ++ GR + V ER+ ++G
Sbjct: 317 FRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQG 354
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|392568200|gb|EIW61374.1| cyclophilin-like protein [Trametes versicolor FP-101664 SS1]
Length = 444
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 47 FEDPK-----DTPPP------TRVETREERLER---------RRRERAEQVAYKLEQEIA 86
FEDP D PP TR+ E+ LE RR++ A+ A LE
Sbjct: 176 FEDPPGLRVPDAPPTSPPDNSTRIAEDEDPLETLPEEEAEEIRRKKAAQASALTLEMVGD 235
Query: 87 LWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYA 146
L N P P LF+ ++N T + L F +G I ++ +K TG YA
Sbjct: 236 LPFANVRP-----PENVLFVCKLNPVTRDEDLELIFSRFGTIISCQVIRDKKTGDSLQYA 290
Query: 147 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
FIE++ + AY +D RR+ VD +S
Sbjct: 291 FIEFDKREEAEQAYFKMQNVLVDDRRIWVDFSQS 324
>gi|224046923|ref|XP_002199213.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Taeniopygia
guttata]
Length = 223
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A
Sbjct: 11 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVLGL 65
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V+V +PRR
Sbjct: 66 DGKIICGSRVRVEVSTG------MPRR 86
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 8 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 62
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 63 DGKVICGSRVRVELSTG------MPRR 83
>gi|71897353|ref|NP_001026539.1| serine/arginine-rich splicing factor 7 [Gallus gallus]
gi|53127360|emb|CAG31063.1| hypothetical protein RCJMB04_1p22 [Gallus gallus]
Length = 223
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A
Sbjct: 11 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVLGL 65
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V+V +PRR
Sbjct: 66 DGKIICGSRVRVEVSTG------MPRR 86
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P +LF+ ++ ++ LRREF YGPI + + + + +PRG+A+I++E RD A
Sbjct: 8 PNSSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDA 67
Query: 160 YKHADGKKIDGRRVLV 175
+ D K + GR++ +
Sbjct: 68 LHNLDRKWVCGRQIEI 83
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + ++ ++ +EF YGP+K + + N P G+AF+ ++ D A +
Sbjct: 7 VYIGNLGSGAAKHEIEKEFARYGPLKDVWIARN-----PPGFAFVVFDDPLDAQDAVEAL 61
Query: 164 DGKKIDGRRVLVDVERSR---TVKGWLPRRLGGGLGGTR 199
DG+++ G RV V++ R +VK R GG GG R
Sbjct: 62 DGRRLCGARVRVEIARGDSHPSVKRSTGHRDRGGYGGNR 100
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + TS L F+ YG + I + ++ TG+ RG+AF+ Y++ + A +
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 163 ADGKKIDGRRVLV 175
DG+ +DGR ++V
Sbjct: 77 LDGRTVDGRNIVV 89
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 97 TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
T+D +L + + Y T+ L+R FE YG + + + + T + RG+AF+ + +RD
Sbjct: 9 TIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDC 68
Query: 157 HSAYKHADGKKIDGRRVLVDVER 179
A DG +DGR + V + R
Sbjct: 69 EDAMDALDGYMMDGRELRVQMAR 91
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDASDAVREL 70
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 71 DGRSLCGCRVRVELS 85
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDASDAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRSLCGCRVRVELS 81
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + +L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAFVEFEDPRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVKGWLPRR 190
DGK I G RV V++ +PRR
Sbjct: 68 DGKVICGSRVRVELSTG------MPRR 88
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
LF+A + + T+E L + F +G +K + + N+ GK +GYAF+E + A +
Sbjct: 172 ALFVANLEWWTTEQNLEQLFSEFGKLKNLKIFENETNGKSKGYAFVELQSHDIARQAKEK 231
Query: 163 ADGKKIDGRRVLVDVERSRTVKGWL 187
+ K+++G+ +++ T + L
Sbjct: 232 LNNKELNGKTIIIKSMNQHTYQQVL 256
>gi|303272135|ref|XP_003055429.1| cyclophilin 59, nuclear [Micromonas pusilla CCMP1545]
gi|226463403|gb|EEH60681.1| cyclophilin 59, nuclear [Micromonas pusilla CCMP1545]
Length = 543
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 56 PTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSE 115
PT VE + +R + A+ A LE L D ++ P P ++LF+ R+N T++
Sbjct: 205 PTEVE------KEKRAQEAKSRAVVLEMIGDLPDADAKP-----PEESLFVCRLNPVTTD 253
Query: 116 SKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
L F +G + +V + TG +AF+ +E + + +AY D ID RRV V
Sbjct: 254 EDLEIIFSRFGKVVGCDVVRDYKTGDSLNFAFVTFETKEEAEAAYFKMDNVLIDDRRVHV 313
Query: 176 DVERS 180
D +S
Sbjct: 314 DFSQS 318
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVERS 180
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELSNG 83
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDASDAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRSLCGCRVRVELS 81
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]
Length = 151
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Monodelphis
domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like [Ailuropoda
melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDV 177
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVEL 80
>gi|156058602|ref|XP_001595224.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980]
gi|154701100|gb|EDO00839.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 269
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + ++ SE + F YG I +V +K TGK +G+AF++YE +R A +
Sbjct: 35 IYIGGLPFELSEGDVLTIFSQYGEPTYINLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
G I GR + VD R + +G
Sbjct: 95 GGAVIAGRTLKVDHTRYKRKEG 116
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + Y T+ LRR FE YG + + + ++ T + RG+AF+ + +RD A
Sbjct: 15 SLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMDA 74
Query: 163 ADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRE 213
DG +DGR + V + R G P GG RRG P KHSGR
Sbjct: 75 MDGALLDGRELRVQMAR----YGRPPDSH---YGGGRRGPPK---KHSGRR 115
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + +D SE + F YG + +V +K TGK RG+AF++YE +R A +
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G + GR + VD
Sbjct: 95 GGATVLGRVLRVD 107
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +RD A
Sbjct: 79 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 138
Query: 161 KHADGKKIDGRRVLVDVER 179
DG +DGR + V + R
Sbjct: 139 DAMDGAVLDGRELRVQMAR 157
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|347839370|emb|CCD53942.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + ++ SE + F YG I ++ +K TGK +G+AF++YE +R A +
Sbjct: 35 IYIGGLPFELSEGDILTIFSQYGEPTYINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRTVKG 185
G I GR + VD R + +G
Sbjct: 95 GGAVIAGRTLKVDHTRYKRKEG 116
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + +D SE + F YG + ++ +K TGK RG+AF++YE +R A +
Sbjct: 35 IYIGGLPFDLSEGDIITIFSQYGEPVHVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G + GR + VD
Sbjct: 95 TGATVLGRVLRVD 107
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|164424346|ref|XP_957404.2| hypothetical protein NCU10166 [Neurospora crassa OR74A]
gi|74619618|sp|Q871A4.1|PPIL4_NEUCR RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|28950237|emb|CAD71104.1| conserved hypothetical protein [Neurospora crassa]
gi|157070475|gb|EAA28168.2| hypothetical protein NCU10166 [Neurospora crassa OR74A]
Length = 494
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 15/148 (10%)
Query: 50 PKDTPPPTRVETREERLE--------------RRRRERAEQVAYKLEQEIALWDPNSFPN 95
P +PPP++ + R+ ER + Q + L P
Sbjct: 186 PSASPPPSKAQLATVRITEGEELLDVEASEEAAAEAERRRREREAAAQALTLEMMGDLPF 245
Query: 96 ATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
A + P + LF+ ++N T++ L F +G I ++ ++ TG YAFIE+E ++
Sbjct: 246 AEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKK 305
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRT 182
AY D ID RR+ VD +S +
Sbjct: 306 SCEEAYSKMDSVLIDDRRIHVDFSQSVS 333
>gi|302420239|ref|XP_003007950.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium albo-atrum
VaMs.102]
gi|261353601|gb|EEY16029.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium albo-atrum
VaMs.102]
Length = 497
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 53/233 (22%)
Query: 50 PKDTPPPTRVETR-----------------EERLERRRRERAEQVAYKLEQEIALWDPNS 92
P +PPPT+ + E+ +E+RRR+R + Q + L
Sbjct: 186 PSISPPPTKAQLATVRIADEAALHEDDALGEDAIEKRRRDREARA-----QALTLEMMGD 240
Query: 93 FPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P A + P + LF+ ++N T++ L F +G I ++ +K TG YAFIEY
Sbjct: 241 LPFAEVAPPENILFVCKLNPVTTDGDLELIFGRFGTILSCEVIRDKKTGDSLQYAFIEYG 300
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLG----------GGLGGT--- 198
+ +AY ID RR+ VD +S + + R GG GG
Sbjct: 301 DKASCEAAYFKMQDVLIDDRRIHVDFSQSVSKLSDVWRNDTNKKRKKNASRGGWGGIDEL 360
Query: 199 -----------RRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSG 240
R G + NL + E + R ER + G P A SG
Sbjct: 361 EKRRQYRDQDDARHGDNYNLVYG------DEEMKGRHERGQGGQGEAPSAESG 407
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + D LR +FE YG +K + + + T +PRG+ FIE++ RD A +
Sbjct: 52 SLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYN 111
Query: 163 ADGKKIDGRRVLVDVER 179
D ++GR + V R
Sbjct: 112 LDRSVVNGREISVTFSR 128
>gi|390350507|ref|XP_003727432.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Strongylocentrotus purpuratus]
Length = 459
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 93 FPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A + P LF+ ++N T+ L F +G I ++ +KVTG Y+FIE+E
Sbjct: 129 LPDADVKPPENVLFVCKLNPLTTSEDLEIIFSRFGKISSCEVIKDKVTGDSLSYSFIEFE 188
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERS 180
E D AY D ID RR+ VD +S
Sbjct: 189 REEDCEEAYFKMDNVLIDDRRIHVDFSQS 217
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + T+ L F+ YG + I + ++ TG RG+AF+ Y++E + A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 163 ADGKKIDGRRVLV 175
DG+ +DGR ++V
Sbjct: 77 LDGRLVDGREMMV 89
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG++F+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++ T+ L FE YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVERS 180
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELSNG 83
>gi|302772328|ref|XP_002969582.1| hypothetical protein SELMODRAFT_440812 [Selaginella moellendorffii]
gi|300163058|gb|EFJ29670.1| hypothetical protein SELMODRAFT_440812 [Selaginella moellendorffii]
Length = 647
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 35/199 (17%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
PF T+++ ++ ++ LR ++ GPIK + P+G+ F E+E+ + A
Sbjct: 119 PFTTVYVGKIAPTIEDAFLRNVLQLCGPIKSWKRAQDPTASAPKGFGFCEFENAEGVLRA 178
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD--VNLKHSGREDNER 217
+ + +DG+ LV + + P+ G ++G D + LKH ED R
Sbjct: 179 LRLLNKNSLDGQE-LVSADGN-------PKAFGIVNEADKKGDEDALIRLKHL-LEDRAR 229
Query: 218 ERERYRLERERELAGGPPRAR---------------SGSNDRERERERRRSRSRERKRRT 262
R +R + G PP R SG ND E +R ER +
Sbjct: 230 SRPLFRPHAD----GRPPSTRDASAKSKDADVKDDLSGKNDDENSSDR-----VERMETS 280
Query: 263 SRSRSRDRRRRRSRERIRD 281
S R R + R RE RD
Sbjct: 281 SSERGRKDKDHRERENDRD 299
>gi|302774873|ref|XP_002970853.1| hypothetical protein SELMODRAFT_441265 [Selaginella moellendorffii]
gi|300161564|gb|EFJ28179.1| hypothetical protein SELMODRAFT_441265 [Selaginella moellendorffii]
Length = 647
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 35/199 (17%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
PF T+++ ++ ++ LR ++ GPIK + P+G+ F E+E+ + A
Sbjct: 119 PFTTVYVGKIAPTIEDAFLRNVLQLCGPIKSWKRAQDPTASAPKGFGFCEFENAEGVLRA 178
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD--VNLKHSGREDNER 217
+ + +DG+ LV + + P+ G ++G D + LKH ED R
Sbjct: 179 LRLLNKNSLDGQE-LVSADGN-------PKAFGIVNEADKKGDEDALIRLKHL-LEDRAR 229
Query: 218 ERERYRLERERELAGGPPRAR---------------SGSNDRERERERRRSRSRERKRRT 262
R +R + G PP R SG ND E +R ER +
Sbjct: 230 SRPLFRPHAD----GRPPSTRDASAKSKDADVKDDLSGKNDDENSSDR-----VERMETS 280
Query: 263 SRSRSRDRRRRRSRERIRD 281
S R R + R RE RD
Sbjct: 281 SSERGRKDKDHRERENDRD 299
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + T+ L F+ YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 163 ADGKKIDGRRVLV 175
DG+ +DGR ++V
Sbjct: 77 LDGRMLDGREIMV 89
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG++F+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|440634278|gb|ELR04197.1| hypothetical protein GMDG_06619 [Geomyces destructans 20631-21]
Length = 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T++ L F +G I ++ +K TG YAFIEY + A
Sbjct: 291 PENVLFVCKLNPVTTDEDLELIFSRFGTILSCEVIRDKRTGDSLQYAFIEYADQASCEQA 350
Query: 160 YKHADGKKIDGRRVLVDVERSRT 182
Y G ID R+ VD +S +
Sbjct: 351 YFKMQGVLIDDHRIHVDFSQSVS 373
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++ T+ L FE YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++ T+ L F+ YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++ T+ L F+ YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDN 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + T+ L F+ YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 163 ADGKKIDGRRVLV 175
DG+ +DGR ++V
Sbjct: 77 LDGRMLDGREIMV 89
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 118 LRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
+R+EFE YG ++ + + + T +P+G+AF+E+ ER+ A ++ DG +IDGR + V
Sbjct: 248 IRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARRNLDGVRIDGRDIRV 305
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +RD A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72
Query: 161 KHADGKKIDGRRVLVDVER 179
DG +DGR + V + R
Sbjct: 73 DAMDGAVLDGRELRVQMAR 91
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVERS 180
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMARC 92
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y T+ LRR FE G + I + ++ T + RG+AF+ + +
Sbjct: 6 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ +DGR + V + R
Sbjct: 66 RDAEDALDAMDGRLLDGRELRVQMAR 91
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y T+ LRR FE G + I + ++ T + RG+AF+ + +
Sbjct: 6 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ +DGR + V + R
Sbjct: 66 RDAEDALDAMDGRLLDGRELRVQMAR 91
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y T+ LRR FE G + I + ++ T + RG+AF+ + +
Sbjct: 6 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ +DGR + V + R
Sbjct: 66 RDAEDALDAMDGRLLDGRELRVQMAR 91
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +RD A
Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72
Query: 161 KHADGKKIDGRRVLVDVER 179
DG +DGR + V + R
Sbjct: 73 DAMDGAVLDGRELRVQMAR 91
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG++F+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+ + + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VCVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|389746838|gb|EIM88017.1| cyclophilin-like protein [Stereum hirsutum FP-91666 SS1]
Length = 466
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 68 RRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGP 127
+RR + A+ A LE L N P P LF+ ++N T + L F +G
Sbjct: 221 QRRLKAAQASALTLEMVGDLPFANVRP-----PENVLFVCKLNPVTRDEDLELIFSRFGV 275
Query: 128 IKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
I ++ +K TG YAFIE++ D AY +D RR+ VD +S
Sbjct: 276 IMSCQVIRDKKTGDSLQYAFIEFDKREDAEQAYFKMQNVLVDDRRIWVDFSQS 328
>gi|355561641|gb|EHH18273.1| hypothetical protein EGK_14839 [Macaca mulatta]
Length = 164
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + +D SE + F YG + +V +K TGK RG+AF++YE +R A +
Sbjct: 35 VYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G + GR + VD
Sbjct: 95 GGATVLGRVLRVD 107
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++ T+ L F+ YG + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+FI + D S ++L REFE +G ++++ + N P G+ FI ++ RD A +
Sbjct: 4 IFIGGLPDDASRTELEREFEHFGSMREVWVARN-----PPGFGFIVFDDPRDAEDAIREM 58
Query: 164 DGKKIDGRRVLVDVER 179
DG+++ G RV V+ R
Sbjct: 59 DGRRVCGMRVRVEKAR 74
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+L + + Y TS LRR FE YG + + + ++ T + RG+AF+ + +RD A
Sbjct: 1 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 60
Query: 161 KHADGKKIDGRRVLVDVER 179
DG +DGR + V + R
Sbjct: 61 DAMDGAVLDGRELRVQMAR 79
>gi|442751175|gb|JAA67747.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 164
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AF E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFAEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELS 81
>gi|326430244|gb|EGD75814.1| hypothetical protein PTSG_07932 [Salpingoeca sp. ATCC 50818]
Length = 459
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 32/199 (16%)
Query: 15 PRDPVPYL--PPVEKLPH-EKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREERLERRRR 71
P D P L PP LP E+ G G +NEFE ET E + R+R
Sbjct: 146 PFDDPPGLPVPPQSPLPTREQIEAGLIGEDEEINEFEGMD--------ETEVEEIMRKRE 197
Query: 72 ERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKK 130
R A LE P+A + P LF+ ++N T++ LR F +G I
Sbjct: 198 ARGR--AQVLEM------VGDLPDADIKAPENVLFVCKLNPVTTDDDLRLIFSRFGKILS 249
Query: 131 IVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS-------RTV 183
++ + T + YAFIE+E + AY + ID RR+ VD +S
Sbjct: 250 CEIIRDWKTQESLQYAFIEFEDKAACEEAYLKMENVLIDDRRIHVDFSQSVAKLKDYNLP 309
Query: 184 KGW-----LPRRLGGGLGG 197
KGW ++ G+GG
Sbjct: 310 KGWKMKGSASAKVRSGMGG 328
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 92 SFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
S P D F +L + + + T+ L F+ YG + + + ++ TG+ RG+AF+ Y+
Sbjct: 7 SGPPDIRDTF-SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYK 65
Query: 152 HERDMHSAYKHADGKKIDGRRVLV 175
+ + A DG+ +DGR ++V
Sbjct: 66 YAEEAQKAVDRLDGRVVDGREIMV 89
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +E + YG I+ MV NK TGK +G+ FI+YE +R + A +
Sbjct: 35 VYVGGMPFEMNEGDIIAVMSQYGEIEDCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G I GR + VD
Sbjct: 95 TGYNIMGRLLRVD 107
>gi|170092026|ref|XP_001877235.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648728|gb|EDR12971.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 452
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ +K TG YAFIE++ D A
Sbjct: 245 PENVLFVCKLNAVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDKREDAEQA 304
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y +D RR+ VD +S
Sbjct: 305 YFKMQNVLVDDRRIWVDFSQS 325
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + S+ + F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNVWVARN-----PPGFAFVEFEDARDAEDAVRGL 64
Query: 164 DGKKIDGRRVLVDVE 178
DG+ I GRR V++
Sbjct: 65 DGRTISGRRARVELS 79
>gi|402220163|gb|EJU00235.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 224
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRG--YAFIEYEHERDMHSA 159
+ LF++ + T L EFE YGP +V T P YAF+E+ +ERD A
Sbjct: 7 RILFVSGFSSHTRAKDLAYEFEKYGP---LVRCDVPATRNPNANPYAFVEFRYERDAEDA 63
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGW 186
Y G +ID RR+ V ++ W
Sbjct: 64 YYDMHGARIDDRRITVQWAKNPPSAIW 90
>gi|402869670|ref|XP_003898873.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Papio
anubis]
Length = 164
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L R F YGP++ + + N P G+AFIE+E D A +
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVARN-----PPGFAFIEFEDPPDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVERS 180
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELSNG 83
>gi|340514765|gb|EGR45024.1| predicted protein [Trichoderma reesei QM6a]
Length = 471
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ ++ TG YAFIEYE + A
Sbjct: 249 PENVLFVCKLNPVTQDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASCELA 308
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y ID RR+ VD +S
Sbjct: 309 YSKMQDVLIDDRRIHVDFSQS 329
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + S+ + F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNVWVARN-----PPGFAFVEFEDARDAEDAVRGL 64
Query: 164 DGKKIDGRRVLVDVE 178
DG+ I GRR V++
Sbjct: 65 DGRTISGRRARVELS 79
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L + R+ D LRREF YGPI + + + T +PRG+A++++E RD A +
Sbjct: 97 LRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 156
Query: 164 DGKKIDGRRVLVDVERS 180
D K I GR++ + +
Sbjct: 157 DRKWICGRQIEIQFAQG 173
>gi|291228272|ref|XP_002734102.1| PREDICTED: transformer-2 sex-determining protein, putative-like
[Saccoglossus kowalevskii]
Length = 204
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L R F YGP++ + + N P G+AF+E+E RD + +
Sbjct: 14 VYVGDLGSGAAKHELERAFSHYGPLRNVWVARN-----PPGFAFVEFEDPRDASDSVRGL 68
Query: 164 DGKKIDGRRVLVDVERSRT 182
DG+ I GRRV V+ ++
Sbjct: 69 DGRVICGRRVRVEQSSGKS 87
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S+ L F YGP+K + + + P G+AF+E+E RD A +
Sbjct: 13 VYVGDLGSSASKQDLEDAFGYYGPLKNVWVARH-----PPGFAFVEFEDPRDADDAVRGL 67
Query: 164 DGKKIDGRRVLV 175
DG+ I GRRV V
Sbjct: 68 DGRSIAGRRVRV 79
>gi|392579834|gb|EIW72961.1| hypothetical protein TREMEDRAFT_42115 [Tremella mesenterica DSM
1558]
Length = 472
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 17 DPVP-----YLPPVEKL-PHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREERLERRR 70
DP P PP+ L P + G + IA DT P + +E+ E RR
Sbjct: 173 DPFPDPSDMITPPLSPLRPPDLDIAGVARIA----------DTENPFEDKPEDEKEELRR 222
Query: 71 RERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIK 129
+ A A LE P AT+ P LF+ ++N T + L F +G I
Sbjct: 223 KTAAASSALTLEM------IGDIPFATVRPPEDILFVCKLNPVTQDEDLELIFSRFGKIL 276
Query: 130 KIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+V +K TG YAFIE++ AY +D RR+ VD +S
Sbjct: 277 SCEVVRDKKTGDSLQYAFIEFDERESAEQAYFKMQNVLVDDRRIWVDFSQS 327
>gi|328865125|gb|EGG13511.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 662
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 95 NATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHER 154
N + P ++I+ +++ T+E +L F +G +K + + N++ GK +GYAF+E
Sbjct: 132 NENLSP--AVYISSLDWWTTEQQLETFFAEFGKLKTLKIFENELNGKSKGYAFVELSSNE 189
Query: 155 DMHSAYKHADGKKIDGRRVLV 175
A + K+I+GR V +
Sbjct: 190 QALQAKEKLSDKQINGREVTI 210
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cricetulus
griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + ++++L F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGNKTELEHAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDAADAVREL 66
Query: 164 DGKKIDGRRVLVDVERS 180
DG+ + G RV V++
Sbjct: 67 DGRTLCGCRVRVELSNG 83
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P + +L I ++Y T LRR F +G I + + +K G+ RG+AF+ + +
Sbjct: 5 PPPDIGGMTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDK-HGESRGFAFVRFHDK 63
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A GK +DGR + VD R
Sbjct: 64 RDAGDAIDDLAGKDLDGREIRVDYAR 89
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L ++ T+ LR E +GPI+ I + + TG PRG F+E+ +D A
Sbjct: 30 SLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARHS 89
Query: 163 ADGKKIDGRRVLV 175
DG + GR + V
Sbjct: 90 LDGSTLAGRVISV 102
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y T+ LRR FE G + I + ++ T + RG+AF+ + +
Sbjct: 7 PPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDK 66
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ +DGR + V + R
Sbjct: 67 RDAQDALDAMDGRMLDGRELRVQMAR 92
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +D +L + + Y T+ LRR FE G + I + ++ T + RG+AF+ + +
Sbjct: 7 PPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDK 66
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG+ +DGR + V + R
Sbjct: 67 RDAQDALDAMDGRMLDGRELRVQMAR 92
>gi|301109355|ref|XP_002903758.1| peptidyl-prolyl cis-trans isomerase-like protein [Phytophthora
infestans T30-4]
gi|262096761|gb|EEY54813.1| peptidyl-prolyl cis-trans isomerase-like protein [Phytophthora
infestans T30-4]
Length = 483
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 47 FEDPKD----TPP--PTRVETREERLERRRR--ERAEQVAYKLEQEI------------- 85
F DPK PP PTR EE++E R E+ ++ + EQEI
Sbjct: 170 FPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRA 229
Query: 86 -ALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPR 143
L P+A + P + LF+ ++N T + L F +GP K V + ++ TG
Sbjct: 230 VVLEMIGDLPDADVRPPEEVLFVCKLNPVTESADLDMAFCRFGPCKSEV-IRDQKTGDSL 288
Query: 144 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGW 186
+AF+E+ R AY + +D RR+ VD +S + K W
Sbjct: 289 CFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVS-KLW 330
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + S+ ++ F YGP++ + + N P G+AF+E+E RD + +
Sbjct: 10 VYVGELGNNASKQEIEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDARDAEDSVRGL 64
Query: 164 DGKKIDGRRVLVDVE 178
DG+ I GRR V++
Sbjct: 65 DGRTICGRRARVELS 79
>gi|357477847|ref|XP_003609209.1| Glycine-rich RNA-binding protein-like protein [Medicago truncatula]
gi|355510264|gb|AES91406.1| Glycine-rich RNA-binding protein-like protein [Medicago truncatula]
Length = 555
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 28/128 (21%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT-GKPRGYAFIEYEHER 154
T+D ++++ + Y ++ +R F +YG I + +++++ T GK Y F+ + + R
Sbjct: 1 MTLDDDSSIYVGGLPYGATDETIRTVFNLYGAILDVKIINDQRTIGKC--YCFVTFTNPR 58
Query: 155 DMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
A +G+ I+GR V V+ +SR GGG SGR +
Sbjct: 59 SAIDAINDMNGRTINGRVVKVNGVKSR----------GGG---------------SGRSN 93
Query: 215 NERERERY 222
RERERY
Sbjct: 94 FGRERERY 101
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L + + Y T+ L+R FE YG + + + + T + RG+AF+ + +RD A
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 164 DGKKIDGRRVLVDVER 179
DG +DGR + V + R
Sbjct: 61 DGYMMDGRELRVQMAR 76
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + S+ ++ F YGP++ + + N P G+AF+E++ RD + +
Sbjct: 14 VYVGELGNNASKQEIEDAFSYYGPLRNVWVARN-----PPGFAFVEFDDARDAEDSVRGL 68
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + GRRV V++
Sbjct: 69 DGRTVCGRRVRVELS 83
>gi|330803078|ref|XP_003289537.1| hypothetical protein DICPUDRAFT_80306 [Dictyostelium purpureum]
gi|325080397|gb|EGC33955.1| hypothetical protein DICPUDRAFT_80306 [Dictyostelium purpureum]
Length = 429
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 96 ATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERD 155
+++ P K + R+ + +E LR E +G + ++ ++++K G+P GYA I + +++
Sbjct: 182 SSLSPIK---VDRLTPNVNEENLREIMEYFGTVNQVKVMYDKDIGQPLGYALIYFRVKQE 238
Query: 156 MHSAYKHADGKKIDGRRVLV 175
+A K DG +IDG V
Sbjct: 239 RDNAKKFMDGGQIDGNIVTA 258
>gi|403415629|emb|CCM02329.1| predicted protein [Fibroporia radiculosa]
Length = 447
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 47 FEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQE--------------IALWDPNS 92
FEDP P + TR R E + +A E+E + L
Sbjct: 176 FEDPPGLVVPELIPTRPPDNSTRIAEDEDPLATLPEEEAENERRKQAARAAALTLEMVGD 235
Query: 93 FPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P A + P LF+ ++N T + L F +G I ++ +K TG YAFIE++
Sbjct: 236 LPFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFD 295
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERS 180
+ AY ID RR+ VD +S
Sbjct: 296 KREEAEQAYFKMQNVLIDERRIWVDFSQS 324
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S L EF YG + + + N P G+A++ +E RD A +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWVARN-----PPGFAYVLFEDARDAKDAVRGL 68
Query: 164 DGKKIDGRRVLVDVERSRTV 183
DGK I R+V VD+ SR+
Sbjct: 69 DGKIICDRKVRVDISNSRST 88
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S L EF YG + + + N P G+A++ +E RD A +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWVARN-----PPGFAYVLFEDARDAKDAVRGL 68
Query: 164 DGKKIDGRRVLVDVERSRTV 183
DGK I R+V VD+ SR+
Sbjct: 69 DGKIICDRKVRVDISNSRST 88
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S L EF YG + + + N P G+A++ +E RD A +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWVARN-----PPGFAYVLFEDARDAKDAVRGL 68
Query: 164 DGKKIDGRRVLVDVERSRTV 183
DGK I R+V VD+ SR+
Sbjct: 69 DGKIICDRKVRVDISNSRST 88
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + Y TS LRR FE YG + + + ++ + + RG+AF+ + +RD A
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 163 ADGKKIDGRRVLVDVER 179
DG +DGR + V + R
Sbjct: 61 MDGALLDGRELRVQMAR 77
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S L EF YG + + + N P G+A++ +E RD A +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWVARN-----PPGFAYVLFEDARDAKDAVRGL 68
Query: 164 DGKKIDGRRVLVDVERSRTV 183
DGK I R+V VD+ SR+
Sbjct: 69 DGKIICDRKVRVDISNSRST 88
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+FI + Y+ SE + F YG + + +K TGK RG+ +++YE +R + A +
Sbjct: 35 VFIGGLPYELSEGDIIAIFSQYGEPVHLHLARDKDTGKSRGFGWLKYEDQRSTNLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G + GR + VD
Sbjct: 95 TGAVVLGRTIRVD 107
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + YD SE + F +G + +V +K TGK +G+ +++YE +R A +
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVER 179
G +I GR + VD R
Sbjct: 95 GGAEIGGRLIRVDHAR 110
>gi|156065891|ref|XP_001598867.1| hypothetical protein SS1G_00956 [Sclerotinia sclerotiorum 1980]
gi|154691815|gb|EDN91553.1| hypothetical protein SS1G_00956 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 447
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 60 ETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLR 119
ET E +E++RRER + Q + L P A + P + + L
Sbjct: 210 ETDVEAVEKQRREREARA-----QALTLEMVGDLPFAEVKPPENVLF----------DLE 254
Query: 120 REFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
F +G I ++ +K TG YAFIEYE ++ AY G ID R+ VD +
Sbjct: 255 LIFSRFGKILSCEVIRDKRTGDSLQYAFIEYEDQKSCEQAYFKMQGVLIDDHRIHVDFSQ 314
Query: 180 S 180
S
Sbjct: 315 S 315
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++++ +ES+LR FE +GP++ + + + TG +G+ F+++ H +A
Sbjct: 295 LYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLN 354
Query: 164 DGKKIDGRRVLVDV 177
+I GR + V
Sbjct: 355 GKLEIAGRTIKVSC 368
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + +++ T+ L FE G + + + ++ TG RG+AF+ Y++ + A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 163 ADGKKIDGRRVLVDVER 179
DG+ +DGR ++V +
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|328874752|gb|EGG23117.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 304
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 97 TMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDM 156
T P + L + +N T+ES L + F YG ++K+ ++ ++ T R YAFI ++++ D
Sbjct: 107 TAPPSRVLGVFGLNPRTTESDLDQVFSKYGKLEKVNLIRDRQTRSSRCYAFIYFDNKEDA 166
Query: 157 HSAYKHADGKKIDGRRVLVDVERSR 181
SA + + ++DGR + +D S+
Sbjct: 167 VSAKEGSLSLELDGRVIRIDYSASQ 191
>gi|409079456|gb|EKM79817.1| hypothetical protein AGABI1DRAFT_113097 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 448
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 66/163 (40%), Gaps = 20/163 (12%)
Query: 44 LNEFEDPKDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKT 103
+ E EDP P EE RR + A A LE L N P P
Sbjct: 208 IAEDEDPLFQLP------EEEEERIRREKAAAASALTLEMVGDLPFANVRP-----PENV 256
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
LF+ ++N T + L F +G I ++ +K TG YAFIE++ D AY
Sbjct: 257 LFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDKRDDAEQAYFKM 316
Query: 164 DGKKIDGRRVLVDVERS--RTVKGWL-------PRRLGGGLGG 197
+D RR+ VD +S R W P R+G G GG
Sbjct: 317 QNVLVDDRRIWVDFSQSVARMNNQWSNDIKRGKPSRVGEGFGG 359
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ ++ T+ L EFE YG +++ V P G+A++E+E RD A K
Sbjct: 7 IYVGNLSSSTTRGDLEYEFEYYGR-----LINVWVAKSPPGFAYVEFEDPRDADDAIKGL 61
Query: 164 DGKKIDGRRVLV 175
DGK++ GRR+ V
Sbjct: 62 DGKELHGRRIRV 73
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ V Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 397 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 456
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 457 NGIKMGDKTLTV 468
>gi|409050086|gb|EKM59563.1| hypothetical protein PHACADRAFT_250155 [Phanerochaete carnosa
HHB-10118-sp]
Length = 277
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 51 KDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVN 110
+D PPP R +R R RA V + Q P PN P L + ++
Sbjct: 35 RDVPPP-RGRSRSRSPARDSFRRASPVPKRPAQA-----PIQAPN----PSSVLGVFGLS 84
Query: 111 YDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 170
T E L EF +G ++K+V+V+++ + + RG+ FI + K +G +++G
Sbjct: 85 IRTVERDLDEEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTVEEASRCIKELNGVELNG 144
Query: 171 RRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGRED 214
RR+ VD + P G +G RR G D +SGRED
Sbjct: 145 RRIRVDYSVTDRPHAPTP---GEYMGHRRRRGRD---SYSGRED 182
>gi|406700117|gb|EKD03302.1| hypothetical protein A1Q2_02412 [Trichosporon asahii var. asahii
CBS 8904]
Length = 485
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 17 DPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREERLERRRRERAEQ 76
DP P + PV P G++ IA D P + + E+ E RR+ A
Sbjct: 176 DP-PNMIPVPDSPLRAPDSGFARIA----------DDEDPFKEMSEEQAEEERRKTAANS 224
Query: 77 VAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVH 135
A LE P A + P LF+ ++N T + L F +G I +V
Sbjct: 225 SALTLEMI------GDLPFAAVRPPENILFVCKLNPVTQDDDLELIFSRFGKILSCEIVR 278
Query: 136 NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+K +G YAFIE++ + AY +D RR+ VD +S
Sbjct: 279 DKKSGDSLQYAFIEFDLKESAEQAYFKMQNVLVDDRRIHVDFSQS 323
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 82 EQEIALWDPNSFPNATMDPFKT----LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNK 137
E E L N+ + P+ L++ ++++ +E+ LR FE +GP++ + + +
Sbjct: 307 EAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDL 366
Query: 138 VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
+G +G+ F+++ H +A +I GR + V
Sbjct: 367 ESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKV 404
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 82 EQEIALWDPNSFPNATMDPFKT----LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNK 137
E E L N+ + P+ L++ ++++ +E+ LR FE +GP++ + + +
Sbjct: 307 EAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDL 366
Query: 138 VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 175
+G +G+ F+++ H +A +I GR + V
Sbjct: 367 ESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKV 404
>gi|401886328|gb|EJT50372.1| hypothetical protein A1Q1_00350 [Trichosporon asahii var. asahii
CBS 2479]
Length = 483
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 17 DPVPYLPPVEKLPHEKKTHGYSGIAAFLNEFEDPKDTPPPTRVETREERLERRRRERAEQ 76
DP P + PV P G++ IA D P + + E+ E RR+ A
Sbjct: 176 DP-PNMIPVPDSPLRAPDSGFARIA----------DDEDPFKEMSEEQAEEERRKTAANS 224
Query: 77 VAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVH 135
A LE P A + P LF+ ++N T + L F +G I +V
Sbjct: 225 SALTLEMI------GDLPFAAVRPPENILFVCKLNPVTQDDDLELIFSRFGKILSCEIVR 278
Query: 136 NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
+K +G YAFIE++ + AY +D RR+ VD +S
Sbjct: 279 DKKSGDSLQYAFIEFDLKESAEQAYFKMQNVLVDDRRIHVDFSQS 323
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ V Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 410 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 469
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 470 NGIKMGDKTLTV 481
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ V Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 412 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 471
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 472 NGIKMGDKTLTV 483
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ V Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 412 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 471
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 472 NGIKMGDKTLTV 483
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
RA Q K E E + S+ D ++I + ++ SE + F YG I
Sbjct: 5 RAIQQLNKRELEAGISPEGSWHTDYRDT-AFIYIGGLPFELSEGDIITIFSQYGEPVWIK 63
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
+ +K TGK RG+A+I+YE +R A + G I R + VD R
Sbjct: 64 LARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDHAR 110
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR FE Y + + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|115908563|ref|XP_787384.2| PREDICTED: uncharacterized protein LOC582336 [Strongylocentrotus
purpuratus]
Length = 702
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T+ L F +G I ++ +KVTG Y+FIE+E E D A
Sbjct: 380 PENVLFVCKLNPLTTSEDLEIIFSRFGKISSCEVIKDKVTGDSLSYSFIEFEREEDCEEA 439
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y D ID RR+ VD +S
Sbjct: 440 YFKMDNVLIDDRRIHVDFSQS 460
>gi|296224036|ref|XP_002757876.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Callithrix
jacchus]
Length = 163
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + S+++L R F Y P++ + + N P G+AF+E+E RD A +
Sbjct: 12 VYVGNLGNNGSKTELERAFGYYRPLRSVWVARN-----PPGFAFVEFEDSRDAADAVQEL 66
Query: 164 DGKKIDGRRVLVDVE 178
DG+ + RV V++
Sbjct: 67 DGRTVCSCRVKVELS 81
>gi|307183144|gb|EFN70061.1| Protein split ends [Camponotus floridanus]
Length = 4330
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+TLFI + D + S+LR+ FE +G +I+ + K G YAF +Y + A +
Sbjct: 379 RTLFIGNLEKDVTASELRKHFEQFG---EIIEIDIKKQGAVSSYAFCQYSDIGSVVKAMR 435
Query: 162 HADGKKIDGRRVLVDVERSR-TVKGWL 187
DG+ I R+ + +S T W+
Sbjct: 436 SMDGEHIGANRIKLGFGKSMPTPCVWV 462
>gi|405965541|gb|EKC30907.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 280
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+ +A + D S+ L R FE +GP+ ++ + N P +AFI Y++ D A +
Sbjct: 36 VHVADLGIDPSKRDLERAFEKFGPLIEVWVARN-----PPCFAFIVYKYREDAEKALREM 90
Query: 164 DGKKIDGRRV 173
DGK + G R+
Sbjct: 91 DGKPLSGGRI 100
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I + ++ SE + F YG I + ++ TGK RG+A+I+YE +R A +
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 164 DGKKIDGRRVLVD 176
G I R + VD
Sbjct: 95 GGANIMDRIIRVD 107
>gi|390601656|gb|EIN11050.1| cyclophilin-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 437
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ +K TG YAFIE++ A
Sbjct: 240 PENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDKREQAEQA 299
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y +D RR+ VD +S
Sbjct: 300 YFKMQNVLVDDRRIWVDFSQS 320
>gi|71996524|ref|NP_495307.3| Protein RSP-5, isoform a [Caenorhabditis elegans]
gi|50897847|sp|Q10021.3|RSP5_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 5;
AltName: Full=CeSC35-2; AltName: Full=RNA-binding
protein srp-3
gi|351064335|emb|CCD72697.1| Protein RSP-5, isoform a [Caenorhabditis elegans]
Length = 208
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++ Y+ E + R + YG I I M + G+AF+++E RD A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKY--------GFAFVDFEDSRDAEDACHDL 55
Query: 164 DGKKIDGRRVLVDVERSR 181
DGK ++G + + VE +R
Sbjct: 56 DGKTMEGSSMRLVVEMAR 73
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 90 PNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIE 149
P + +A ++ + Y+ SE + F +G + +V +K TGK +G+ +++
Sbjct: 21 PEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLK 80
Query: 150 YEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
YE +R A + G +I GR + VD R +
Sbjct: 81 YEDQRSTDLAVDNLGGAEIGGRLIRVDHARYKM 113
>gi|322791721|gb|EFZ15997.1| hypothetical protein SINV_11524 [Solenopsis invicta]
Length = 4232
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+TLFI + D + S+LR+ FE +G +I+ + K G YAF +Y + A +
Sbjct: 363 RTLFIGNLEKDVTASELRKHFEPFG---EIIEIDIKKQGAVSSYAFCQYSDIGSVVKAMR 419
Query: 162 HADGKKIDGRRVLVDVERSR-TVKGWL 187
DG+ + R+ + +S T W+
Sbjct: 420 SMDGEHLGANRIKLGFGKSMPTSCVWV 446
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + ++ +L F YG ++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGDLGSGATKQELEDAFSYYGSLRNVWVARN-----PPGFAFVEFEDARDAEDAIRGL 67
Query: 164 DGKKIDGRRVLVDVERSRTVK 184
DG+ I GRR V+ R ++
Sbjct: 68 DGRTICGRRARVEPSNGRRLR 88
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L + + + T ++R F +G ++ + + + T KPRG+AF+E+ D A
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDR 93
Query: 163 ADGKKIDGRRVLV 175
DG +DGR + V
Sbjct: 94 LDGYNLDGRNISV 106
>gi|332028066|gb|EGI68117.1| Protein split ends [Acromyrmex echinatior]
Length = 4415
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+TLFI + D + S+LR+ FE +G +I+ + K G YAF +Y + A +
Sbjct: 464 RTLFIGNLEKDVTASELRKHFEPFG---EIIEIDIKKQGAVSSYAFCQYSDIGSVVKAMR 520
Query: 162 HADGKKIDGRRVLVDVERSR-TVKGWL 187
DG+ + R+ + +S T W+
Sbjct: 521 SMDGEHLGANRIKLGFGKSMPTSCVWV 547
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + Y+ SE + F +G + +V +K TGK +G+ +++YE +R A +
Sbjct: 19 IYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 164 DGKKIDGRRVLVDVERSRT 182
G +I GR V VD R +
Sbjct: 79 GGAEIGGRLVRVDHARYKA 97
>gi|426232112|ref|XP_004010078.1| PREDICTED: uncharacterized protein LOC101116481 [Ovis aries]
Length = 233
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++I R++Y+ E ++R F YG + +I + + GY F+E+E RD A
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN--------GYGFVEFEDSRDADDAVYEL 55
Query: 164 DGKKIDGRRVLVDVERS 180
+GK++ G RV+V+ R
Sbjct: 56 NGKELCGERVIVEHARG 72
>gi|395330687|gb|EJF63070.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 272
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P +P L + ++ T+E L EF +G ++K+V+V+++ + + RG+ FI
Sbjct: 67 PIQAPNPSNVLGVFGLSIRTTERDLDDEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTT 126
Query: 154 RDMHSAYKHADGKKIDGRRVLVD 176
+ K +G +++GRR+ VD
Sbjct: 127 EEATRCIKELNGVELNGRRIRVD 149
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEV---YGPIKKIVMVHNKVTGKPRGYAFIEY 150
P ++ +L + + Y TS LRR FE YG + + + ++ T + RG+AF+ +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRF 65
Query: 151 EHERDMHSAYKHADGKKIDGRRVLVDVER 179
+RD A DG +DGR + V + R
Sbjct: 66 HDKRDAEDAMDAMDGAVLDGRELRVQMAR 94
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + YD +E + F +G + + +K TGK +G+ +++YE +R A +
Sbjct: 19 IYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 164 DGKKIDGRRVLVDVERSR 181
G I GR + VD R +
Sbjct: 79 GGADISGRMISVDHARYK 96
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 94 PNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHE 153
P ++ +L + + Y TS LRR E YG + + ++ T + RG+AF+ + +
Sbjct: 6 PPPDVEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDK 65
Query: 154 RDMHSAYKHADGKKIDGRRVLVDVER 179
RD A DG +DGR + V + R
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMAR 91
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 15/220 (6%)
Query: 122 FEVYGPIKKIVMVHNKVTGK---PRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
V PI K+ + K+ K PR Y IE E + A G + V++D+
Sbjct: 1036 VHVQDPISKL-WIPAKIISKAETPRSY-IIETETGSSVTRAKPAVSGVRTSDV-VVLDLS 1092
Query: 179 RSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRAR 238
+ T W + L + R G +H + D ++ERE+ R +++RE R +
Sbjct: 1093 KEDT---WGAKELTESIKEARSSGKS---RHKDK-DRDKEREKPR-DKDRERHRDKDRDK 1144
Query: 239 SGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRD 298
D+E ER+R + R R++++ R R +DR S+E+ R+ + + KD+ R+
Sbjct: 1145 DSHRDKEHERKRDKDRDRQKEKDKDRERRKDREGESSKEKDRERRKDREKDSSKDKDRRE 1204
Query: 299 RDRDRKRRRERENSEDRNERKRDR-KERRKERERNNEERE 337
+DRD ++ RE+E+S++++ ++DR K R KE++R+ E++E
Sbjct: 1205 KDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDREKKE 1244
>gi|307200599|gb|EFN80740.1| Protein split ends [Harpegnathos saltator]
Length = 4415
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+TLFI + D + S+LR+ FE +G +I+ + K G YAF +Y + A +
Sbjct: 382 RTLFIGNLEKDVTASELRKHFEPFG---EIIEIDIKKQGAVSSYAFCQYSDIGSVVKAMR 438
Query: 162 HADGKKIDGRRVLVDVERSR-TVKGWL 187
DG+ + R+ + +S T W+
Sbjct: 439 SMDGEHLGTNRIKLGFGKSMPTSCVWV 465
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 94 PNATMDPFKT----LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIE 149
P + P+ L++ ++++ +E +LR+ FE +G ++ + + + TG +G+ F++
Sbjct: 311 PGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQ 370
Query: 150 YEHERDMHSAYKHADGKKIDGRRVLVDV 177
+ D +A I GR + V V
Sbjct: 371 FARLEDARAAQSLNGQLDIAGRTIKVSV 398
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + S+ ++ F YGP++ + + N P G+AF+E+E RD A +
Sbjct: 13 VYVGNLGNSASKHEIETAFSKYGPLRNVWVARN-----PPGFAFVEFEDSRDAEDAVRGL 67
Query: 164 DGKKIDGRRVLVDV 177
DG + G RV V++
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|402226431|gb|EJU06491.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 304
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 91 NSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEY 150
+ P AT L + ++ T E L F YG ++ + +V+++ + + RG+ FI+
Sbjct: 65 TTAPKAT----NVLGVFGLSVRTVERDLEELFNQYGTVEHVTIVYDQRSDRSRGFGFIQM 120
Query: 151 EHERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPD 204
D +G+ ++GR + VD + P R G RR G D
Sbjct: 121 ATVEDATKCISELNGRDVNGRNIRVDYSVTERAHDPTPGRYMGAPDRDRRSGYD 174
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+ + + + TS +R FE +G I+ + + + T +PRG+ F+E+ + D A +
Sbjct: 8 STLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRA 67
Query: 163 ADGKKIDGRRVLVDVERSR 181
D ++DG + + + R
Sbjct: 68 MDNTELDGSVITCCIAQDR 86
>gi|91089021|ref|XP_968771.1| PREDICTED: similar to CG5808 CG5808-PA [Tribolium castaneum]
gi|270011537|gb|EFA07985.1| hypothetical protein TcasGA2_TC005570 [Tribolium castaneum]
Length = 467
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 58/253 (22%)
Query: 93 FPNATMDP-FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
P+A M P LF+ ++N TS+ L F +G IK ++ ++ TG YAF+E+E
Sbjct: 230 IPDAEMAPPENVLFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKTGDSLQYAFVEFE 289
Query: 152 HERDMHSAYKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGPDVNLKHSG 211
++ AY D ID RR+ VD +S + WL G RG +++ G
Sbjct: 290 DKKSCEDAYFKMDNVLIDDRRIHVDFSQSVSKVRWL---------GKGRG-----VRNLG 335
Query: 212 REDNERERERYRLERERELAGGPPRARSGSNDRERERERRR----------------SRS 255
+D + + Y+ E++ D+E+ E+R
Sbjct: 336 EKDQDLGKGHYQKNGEKK------------KDKEKRTEKRNEDRRNRSPERRRDRRYDDR 383
Query: 256 RERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRR-RERENSED 314
R+R R RSR + RR ER ++ + D +KRR R +
Sbjct: 384 RDRYYDRRRDRSRSPKYRREEER--------------HKTVQKYDAKKKRRDRSSSGEAN 429
Query: 315 RNERKRDRKERRK 327
RN+ K K++ K
Sbjct: 430 RNQSKSSHKDKTK 442
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain Shintoku]
Length = 267
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+ + + + T+ +R FE +G I+ + + + T +PRG+ F+EY + D A K
Sbjct: 8 STLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVKA 67
Query: 163 ADGKKIDGRRVLVDVERSR 181
D +DG + + + R
Sbjct: 68 MDNTDLDGSIINCCLAQDR 86
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 98 MDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMH 157
DP +++ + + + ++ F YG ++ + + N P G+AF+E+E RD
Sbjct: 8 WDPRCKVYVGNLGSNAARGEIEEAFSKYGTLRNVWVARN-----PPGFAFVEFEDPRDAE 62
Query: 158 SAYKHADGKKIDGRRVLVDVERSR 181
A + DG ++ G RV V++ +
Sbjct: 63 DAVRALDGVRLCGARVKVEMSTGK 86
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + YD +E + F +G + + +K TGK +G+ +++YE +R A +
Sbjct: 35 IYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRT 182
G I GR + VD R +
Sbjct: 95 GGADIGGRMISVDHARYKA 113
>gi|321249482|ref|XP_003191470.1| hypothetical protein CGB_A5130W [Cryptococcus gattii WM276]
gi|317457937|gb|ADV19683.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 505
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I +V +K +G YAFIE++ A
Sbjct: 244 PENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQA 303
Query: 160 YKHADGKKIDGRRVLVDVERS 180
Y +D RR+ VD +S
Sbjct: 304 YFKMQNVLVDDRRIWVDFSQS 324
>gi|393216149|gb|EJD01640.1| cyclophilin-like protein [Fomitiporia mediterranea MF3/22]
Length = 442
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 52 DTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNY 111
D P T + EE ERR+R A A LE L N P P LF+ ++N
Sbjct: 202 DEDPLTTLPEEEEEKERRKRAAAAS-ALTLEMVGDLPFANVRP-----PENVLFVCKLNP 255
Query: 112 DTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGR 171
T + L F +G I ++ +K+TG YAFIE++ D AY ID R
Sbjct: 256 VTRDEDLELIFSRFGTIMSCQVIRDKLTGDSLQYAFIEFDKREDAEQAYFKMQNVLIDDR 315
Query: 172 RVLVDVERS--RTVKGWLPRRLGGGLGG---TRRGGPDVNLKHSGREDNERERERYRLER 226
R+ VD +S + W G GG R G +GRED E R RYR
Sbjct: 316 RIWVDFSQSVAKLNTHWSNDVKVGPRGGRNRNRDG-------FAGREDLEATR-RYRASE 367
Query: 227 ERELAG 232
+R G
Sbjct: 368 DRNGGG 373
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
RA Q K E E + P + +A ++ + Y+ +E + F +G +
Sbjct: 5 RAIQALNKREIENGV-SPEASWHADYRDTAFIYFGGLPYELTEGDVITIFSQFGEPVFLK 63
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
+V +K TGK +G+ +++YE +R A + G +I GR + VD R +
Sbjct: 64 LVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHARYKA 113
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 391 IFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 450
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 451 NGIKMGDKTLTV 462
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 386 VFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 445
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 446 NGIKMGDKTLTV 457
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + + T E L F+ +G I + M G+AF+E+++E+ + A
Sbjct: 62 IYVGKFSSRTGEKDLEETFKKFGKILSLDM--------KAGFAFVEFDNEKSANQAIDEM 113
Query: 164 DGKKIDGRRVLV 175
DGK++DG +++V
Sbjct: 114 DGKEVDGEKLIV 125
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ ++Y+ +E + F +G + +V ++ TGK +G+ +++YE +R A +
Sbjct: 35 VYFGGLSYELTEGDVVTIFSQFGEPVFLKLVRDRETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVER 179
G +I GR V VD R
Sbjct: 95 GGAEIAGRLVRVDHAR 110
>gi|332026097|gb|EGI66245.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Acromyrmex echinatior]
Length = 504
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 61 TREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRR 120
T EE +E ++ + A+ A LE + D + P P LF+ ++N T++ L
Sbjct: 204 TTEEIMEMQKNKEAKARATILEIVGDIPDADIAP-----PENVLFVCKLNPVTNDDDLEI 258
Query: 121 EFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERS 180
F +G I ++ + TG YAFIE+ + AY D ID RR+ VD +S
Sbjct: 259 IFSRFGKIVGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKMDNVLIDDRRIHVDFSQS 318
Query: 181 RTVKGWLPRRLGGGLGGTRRGGPDVNLKHSGREDNERERERYRLERERELAGGPPRARSG 240
W R G G+ RY E
Sbjct: 319 VAKMRW--RGKGKGI-------------------------RYFDE--------------- 336
Query: 241 SNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRE 277
+D+ ++RE S SR + S +RD +S+E
Sbjct: 337 -DDKPKKREDNYSSSR----KLDASHNRDHDNGKSKE 368
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+ TL + + + TS +R FE +G I+ + + + T +PRG+ F+E+ + D A
Sbjct: 7 YSTL-LRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAV 65
Query: 161 KHADGKKIDGRRVLVDVERSR 181
+ D ++DG + + + R
Sbjct: 66 RAMDNTELDGSVITCCIAQDR 86
>gi|405975539|gb|EKC40098.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 214
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+LF+ R++ T L FE YG + + + + G YAFI+YE RD A ++
Sbjct: 9 SLFVGRLSKSTRVRDLEDIFEPYGRMTRCEIKY----GAEMAYAFIDYEDHRDAEDAVRY 64
Query: 163 ADGKKIDGRRVLV 175
+G++I G ++V
Sbjct: 65 ENGREICGSSIIV 77
>gi|451850353|gb|EMD63655.1| hypothetical protein COCSADRAFT_171910 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TL++ + T L EFE YG + + + + +AF+EYE RD AY
Sbjct: 8 TLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPRSASSRLSFAFVEYESRRDADDAYHE 67
Query: 163 ADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 68 MHNKRI-GRDDLLKIEWART 86
>gi|378733759|gb|EHY60218.1| hypothetical protein HMPREF1120_08187 [Exophiala dermatitidis
NIH/UT8656]
Length = 370
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
R Q+ K E E A P++ +A +++ ++ D +E + F +G +
Sbjct: 5 RQTQLLNKRELENAT-PPSASWHADYRDTAWIYVGGLHSDLTEGDVVTIFSQFGNPTHLN 63
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
++ +K TGK +G+ F++YE +R A + G ++ GR + VD R
Sbjct: 64 LIRDKETGKSKGFGFLKYEDQRSCDLAVDNLGGAEVLGRLLRVDHTR 110
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 96 ATMDPFKT----LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYE 151
A + P+ L++ ++++ +E+ LR FE +G I+ + + + TG +G+ F+++
Sbjct: 293 AVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFA 352
Query: 152 HERDMHSAYKHADGKKIDGRRVLV 175
H +A +I GR + V
Sbjct: 353 HLEHAKAAQSLNGKLEIAGRTIKV 376
>gi|452000385|gb|EMD92846.1| hypothetical protein COCHEDRAFT_1172404 [Cochliobolus
heterostrophus C5]
Length = 224
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TL++ + T L EFE YG + + + + +AF+EYE RD AY
Sbjct: 8 TLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPRSASSRLSFAFVEYESRRDADDAYHE 67
Query: 163 ADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 68 MHNKRI-GRDDLLKIEWART 86
>gi|390595888|gb|EIN05292.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 230
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P + LF++ + +T L EFE YGP+ + + + YAF+E+ RD A
Sbjct: 2 PPRILFVSGFHPNTRARDLAYEFERYGPLVRCDVPAPRNPHSNNPYAFVEFRSTRDAEDA 61
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGW 186
Y G+ +G R+ + ++ W
Sbjct: 62 YYDLHGRSFEGARLSIQWAKNPPSSVW 88
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 101 FKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+L + + Y TS LRR FE YG + + + ++ + + RG+AF+ + +RD A
Sbjct: 13 MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAM 72
Query: 161 KHADGKKIDGRRVLVDVER-------SRTVKGWLPR 189
DG +DGR + V + R + +G PR
Sbjct: 73 DAMDGALLDGRELRVQMARYGRPPDSMYSRRGPAPR 108
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
+L+I + +T+ L F VYG I++ + K +G R +AFIE++ RD A K
Sbjct: 2 SLYIGGLTAETNARDLDNLFSVYGTIQRNDIK--KTSG--RCFAFIEFKERRDADDALKA 57
Query: 163 ADGKKIDGRRVLV 175
+G K+ G ++ V
Sbjct: 58 LNGAKLLGSKITV 70
>gi|46135807|ref|XP_389595.1| hypothetical protein FG09419.1 [Gibberella zeae PH-1]
Length = 306
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 83 QEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKP 142
E AL P + ++ + Y+ SE + F +G + + +K TGK
Sbjct: 1 MEYALSTPEGSWHTDYRDTAYIYFGGLPYELSEGDVITIFSQFGEPVWLKLARDKETGKS 60
Query: 143 RGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
+G+ +++YE +R A + G + GR V VD R +
Sbjct: 61 KGFGWLKYEDQRSTDLAVDNLGGADMGGRLVSVDHARYKM 100
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
++ + + + + LR +FE +G ++ + + + T + RG+ FIE+ RD A
Sbjct: 22 SVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 81
Query: 163 ADGKKIDGRRVLVDVER 179
D +DGR + V + +
Sbjct: 82 TDRTMLDGREINVCLSK 98
>gi|400597950|gb|EJP65674.1| U2 snRNP component IST3 [Beauveria bassiana ARSEF 2860]
Length = 319
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + Y+ SE + F +G + +V +K TGK +G+ +++YE++R A +
Sbjct: 35 VYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYENQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVER 179
G ++ GR + VD R
Sbjct: 95 GGAEVGGRLLRVDHAR 110
>gi|134106915|ref|XP_777770.1| hypothetical protein CNBA4680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260468|gb|EAL23123.1| hypothetical protein CNBA4680 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 501
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 51 KDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARV 109
DT P V EE E RRR A A LE P A + P LF+ ++
Sbjct: 197 ADTEDPNAVIPEEEAEELRRRTEAASSALTLEMI------GDLPFAAVRPPENILFVCKL 250
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
N T + L F +G I +V +K +G YAFIE++ AY +D
Sbjct: 251 NPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQAYFKMQNVLVD 310
Query: 170 GRRVLVDVERS 180
RR+ VD +S
Sbjct: 311 DRRIWVDFSQS 321
>gi|58259029|ref|XP_566927.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819223|sp|P0CP89.1|PPIL4_CRYNB RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|338819224|sp|P0CP88.1|PPIL4_CRYNJ RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|57223064|gb|AAW41108.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 504
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 51 KDTPPPTRVETREERLERRRRERAEQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARV 109
DT P V EE E RRR A A LE P A + P LF+ ++
Sbjct: 200 ADTEDPNAVIPEEEAEELRRRTEAASSALTLEMI------GDLPFAAVRPPENILFVCKL 253
Query: 110 NYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKID 169
N T + L F +G I +V +K +G YAFIE++ AY +D
Sbjct: 254 NPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQAYFKMQNVLVD 313
Query: 170 GRRVLVDVERS 180
RR+ VD +S
Sbjct: 314 DRRIWVDFSQS 324
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 378 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 437
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 438 NGIKMGDKTLTV 449
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++++ +ES+LR FE +G ++ + + + TG +G+ FI++ H +A
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSLN 522
Query: 164 DGKKIDGRRVLV 175
+I GR + V
Sbjct: 523 GKLEIAGRTIKV 534
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
RA Q K E E + P + +A ++ + Y+ SE + F +G +
Sbjct: 5 RAIQALNKREIEQGI-PPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPVFLK 63
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
+ +K TGK +G+ +++YE +R A + G +I GR + VD R +
Sbjct: 64 LARDKETGKSKGFGWLKYEDQRSTDLAVDNLSGAEIGGRLIRVDHARYKL 113
>gi|268531628|ref|XP_002630941.1| C. briggsae CBR-RSP-5 protein [Caenorhabditis briggsae]
Length = 213
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ ++ Y E + R + YG I I M + G+AF+++E RD A
Sbjct: 4 IYLGKIPYHARERDIERFLKGYGRITNISMKY--------GFAFVDFEDYRDAEDACHDL 55
Query: 164 DGKKIDGRRVLVDVERSR 181
DGK +DG + V VE ++
Sbjct: 56 DGKTMDGSSMRVVVEMAK 73
>gi|342883559|gb|EGU84022.1| hypothetical protein FOXB_05442 [Fusarium oxysporum Fo5176]
Length = 318
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + Y+ SE + F +G + + +K TGK +G+ +++YE +R A +
Sbjct: 35 VYFGGLPYELSEGDVITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVERSRT 182
G I GR + VD R +
Sbjct: 95 GGADIGGRLISVDHARYKA 113
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 39/70 (55%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++++ +ES+LR FE +G ++ + + + TG +G+ FI++ H +A
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSLN 522
Query: 164 DGKKIDGRRV 173
+I GR +
Sbjct: 523 GKLEIAGRTI 532
>gi|310796009|gb|EFQ31470.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 501
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 46 EFEDPKDTPPPTRVETR-----------------EERLERRRRERAEQVAYKLEQEIALW 88
E +P +PPPT+ + EE +E+RRR+R + Q + L
Sbjct: 182 ELREPSGSPPPTKAQLDTVRIADEAALHEDDDLDEEAIEKRRRDREARA-----QALTLE 236
Query: 89 DPNSFPNATMDPFK-TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAF 147
P A + P + LF+ ++N T+++ L F +G I ++ + TG YAF
Sbjct: 237 MMGDLPFAEVAPPENVLFVCKLNPVTTDADLELIFGRFGKILSCEVIRDAKTGDSLQYAF 296
Query: 148 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERS--RTVKGW-----LPRRLGGGLGGTRR 200
IEY + +AY ID RR+ VD +S + + W RR GG
Sbjct: 297 IEYADKASCEAAYAKMQDVLIDDRRIHVDFSQSVSKLSQVWRDDTNQKRRKHASRGGW-- 354
Query: 201 GGPD-VNLKHSGREDNERERERYRLER-ERELAGGPPRARSGSNDRERERERRRSRSRER 258
GG D + + R++ ER +++Y L + E+ G RA+ G + R + +R+R
Sbjct: 355 GGVDELEKRRQYRDEYERTQDQYNLVYGDEEMKGRHERAKDGRPEPPERRAEQDRDARDR 414
Query: 259 KRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRSDRDRDRDRKRRRER 309
R + R R + + + + DR R DR R+R
Sbjct: 415 DRPRAERERRRSRSPGRPRARDRERERDRDRDGRGDGDRFRPDDRGAGRQR 465
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + Y +E ++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 359 IFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 418
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 419 NGIKMGDKTLTV 430
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 436 NGIKMGDKTLTV 447
>gi|425772279|gb|EKV10689.1| Pre-mRNA-splicing factor srp1 [Penicillium digitatum PHI26]
gi|425782748|gb|EKV20641.1| Pre-mRNA-splicing factor srp1 [Penicillium digitatum Pd1]
Length = 240
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TL++ + T L EFE YG + + + + T R +AF+EYE RD AY
Sbjct: 8 TLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TPSSRLFAFVEYESRRDADDAYHE 66
Query: 163 ADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 67 MHNKRI-GRDDLLKIEWART 85
>gi|452981595|gb|EME81355.1| hypothetical protein MYCFIDRAFT_72175 [Pseudocercospora fijiensis
CIRAD86]
Length = 225
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TL++ + T L EFE YG + + + + T R +AF+EYE RD AY
Sbjct: 8 TLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TASSRLFAFVEYEKIRDADDAYYE 66
Query: 163 ADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 67 MHNKRI-GRDDLLKIEWART 85
>gi|67539264|ref|XP_663406.1| hypothetical protein AN5802.2 [Aspergillus nidulans FGSC A4]
gi|40739121|gb|EAA58311.1| hypothetical protein AN5802.2 [Aspergillus nidulans FGSC A4]
gi|259480045|tpe|CBF70819.1| TPA: putative RNA binding protein SwoK (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 220
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P TL++ + T L EFE YG + + + + T R +AF+EYE RD A
Sbjct: 4 PGTTLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TPSSRLFAFVEYESRRDADDA 62
Query: 160 YKHADGKKIDGRRVLVDVERSRT 182
Y K+I GR L+ +E +RT
Sbjct: 63 YHEMHNKRI-GRDDLLKIEWART 84
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVT-GKPRGYAFIEYEHERDMHSAYK 161
+L+I R++ DT+E L F YG I + N V R YAFIEY+ ++D A K
Sbjct: 2 SLYIGRLSTDTTERHLNDHFSKYGTITR-----NDVKRSNGRCYAFIEYKEKKDADDALK 56
Query: 162 HADGKKIDGRRVLVDVER 179
+G + ++ V+ +
Sbjct: 57 ALNGTTLLNSKISVEWAK 74
>gi|453084836|gb|EMF12880.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 244
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
TL+++ + T L EFE YG + + + + T R +AF+EYE+ RD AY
Sbjct: 8 TTLYVSGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TASSRLFAFVEYENRRDADDAYY 66
Query: 162 HADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 67 EMHNKRI-GRDDLLKIEWART 86
>gi|449544152|gb|EMD35126.1| hypothetical protein CERSUDRAFT_116600 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKI-VMVHNKVTGKPRGYAFIEYEHERDMHSAY 160
+ LF++ + T L EFE YGP+ + V YAF+E+ +RD AY
Sbjct: 3 RILFVSGFHSATRARDLAYEFERYGPLVRCDVPAPRNPHANSNPYAFVEFRSQRDAEDAY 62
Query: 161 KHADGKKIDGRRVLVDVERSRTVKGW 186
G+ +G R+ + ++ W
Sbjct: 63 YDMHGRTFEGARLSIQWAKNPPSSVW 88
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 241 SNDRERERERRRSRSRERKRRTS----RSRSRDRRRRRSRERIRDDDIEEVEFRPKDRS- 295
S +R++ R++ R RSRER +R RSR RD RR + RE RD ++ R K++
Sbjct: 321 SRERDQRRDKDRERSRERDQRRDKDRERSRDRDLRREKGREGSRDSSVDRYRRREKEQER 380
Query: 296 --DRDRDRDRKRRRERENSEDRNERKRDRKERRKER 329
DR+ DRD KR++++E S DR + RKER+ ER
Sbjct: 381 SRDREVDRDLKRQKQQERSWDREVDRDQRKERQWER 416
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TL++ ++ T+E ++ EF YG + + + K F+EY+ ERD AY+
Sbjct: 6 TLYVGNISSRTTERDIKDEFGRYGRVIRCYIPPGK------NICFVEYDDERDAEDAYRG 59
Query: 163 ADGKKIDG 170
++DG
Sbjct: 60 MASARVDG 67
>gi|84999532|ref|XP_954487.1| RNA-binding protein [Theileria annulata]
gi|65305485|emb|CAI73810.1| RNA-binding protein, putative [Theileria annulata]
Length = 292
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 81 LEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTG 140
LE + + S+ N D +FI +++ +E + F +G I + +K TG
Sbjct: 19 LELKKGIIGEGSWHNQYKDSC-YIFIGGLDHRMTEGDIIIVFSQFGEPIDINLKRDKDTG 77
Query: 141 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
K GY F+ Y+ +R A + +G + GRR+ VD
Sbjct: 78 KSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVD 113
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+F+ + Y +E+++R E +GP++ +V ++ TG +GYAF Y+ A
Sbjct: 333 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAAL 392
Query: 164 DGKKIDGRRVLV 175
+G K+ + + V
Sbjct: 393 NGIKMGDKTLTV 404
>gi|212532545|ref|XP_002146429.1| pre-mRNA splicing factor (Srp1), putative [Talaromyces marneffei
ATCC 18224]
gi|210071793|gb|EEA25882.1| pre-mRNA splicing factor (Srp1), putative [Talaromyces marneffei
ATCC 18224]
Length = 208
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
TL++ + T L EFE YG + + + + T R +AF+EYE RD AY
Sbjct: 7 TTLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TASSRLFAFVEYESRRDADDAYH 65
Query: 162 HADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 66 EMHNKRI-GRDDLLKIEWART 85
>gi|336373949|gb|EGO02287.1| hypothetical protein SERLA73DRAFT_104684 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386883|gb|EGO28029.1| hypothetical protein SERLADRAFT_367589 [Serpula lacrymans var.
lacrymans S7.9]
Length = 437
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 65/163 (39%), Gaps = 20/163 (12%)
Query: 100 PFKTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSA 159
P LF+ ++N T + L F +G I ++ +K TG YAFIE++ D A
Sbjct: 244 PENVLFVCKLNPVTRDEDLELIFSRFGIIMSCQVLRDKRTGDSLQYAFIEFDKREDAEQA 303
Query: 160 YKHADGKKIDGRRVLVDVERSRTVKGWLPRRLGGGLGGTRRGGP---DVNLKHSGREDNE 216
Y +D RR+ VD +S RL + GP +GRED E
Sbjct: 304 YFKMQNVLVDDRRIWVDFSQSVA-------RLNTSWSNDPKIGPRRKQAKGGFAGREDLE 356
Query: 217 RERERYRLERER---------ELAGGPPRARSGSNDRERERER 250
R RYR E E+ GG R G R R ER
Sbjct: 357 ETR-RYRAGGEHDRDGYGMVFEVPGGRESGRRGKRSRSRGHER 398
>gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 763
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 66 LERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVY 125
L+RR RE L +EIA+ + + PN+ LF+ + Y+TS + E++
Sbjct: 309 LQRRSRE--------LRKEIAMLEDDFNPNSINKSATRLFVGGLAYNTSRYDI---CELF 357
Query: 126 GPIKKIVMVH-----------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
GP+ IV V ++ RG AFIE+ +D +A + + G+ + GR +
Sbjct: 358 GPVGPIVDVSLPQIDRAIPNDSEDAFAVRGIAFIEFADRKDARTALELS-GRHLCGRPIT 416
Query: 175 VD 176
V+
Sbjct: 417 VN 418
>gi|237839061|ref|XP_002368828.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211966492|gb|EEB01688.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 754
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 66 LERRRRERAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVY 125
L+RR RE L +EIA+ + + PN+ LF+ + Y+TS + E++
Sbjct: 309 LQRRSRE--------LRKEIAMLEDDFNPNSINKSATRLFVGGLAYNTSRYDI---CELF 357
Query: 126 GPIKKIVMVH-----------NKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 174
GP+ IV V ++ RG AFIE+ +D +A + + G+ + GR +
Sbjct: 358 GPVGPIVDVSLPQIDRAIPNDSEDAFAVRGIAFIEFADRKDARTALELS-GRHLCGRPIT 416
Query: 175 VD 176
V+
Sbjct: 417 VN 418
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
+++++ V D S S L FE YG + I + + G+PRG+A+++++ + D A +
Sbjct: 4 RSIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAME 63
Query: 162 HADGKKIDGRRVLV 175
I G+ + V
Sbjct: 64 KIPSIVILGQTLNV 77
>gi|398396452|ref|XP_003851684.1| hypothetical protein MYCGRDRAFT_60426 [Zymoseptoria tritici IPO323]
gi|339471564|gb|EGP86660.1| hypothetical protein MYCGRDRAFT_60426 [Zymoseptoria tritici IPO323]
Length = 229
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 103 TLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKH 162
TL++ + T L EFE YG + + + + T R +AF+EYE RD AY
Sbjct: 8 TLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TASSRLFAFVEYESRRDADDAYHE 66
Query: 163 ADGKKIDGRRVLVDVERSRT--VKGWLPRRLGGGLGGTRRGGP-----DVNLKHSGREDN 215
K+I GR L+ +E +RT W R G G R P G
Sbjct: 67 MHNKRI-GRDDLLKIEWARTPPSASW---RFDTGRDGERGAEPRGSDRGDRGSARGGGRG 122
Query: 216 ERERERYRLERERELAGGPPRARSGSNDRERE 247
+ R R R +G PPRAR +DRER+
Sbjct: 123 DDRGVRRDRSRGRGRSGSPPRARRAEDDRERD 154
>gi|310797734|gb|EFQ32627.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 331
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + Y+ SE + F +G + + +K TGK +G+ +++YE +R A +
Sbjct: 35 IYFGGLPYEMSEGDVITVFSQFGEPVWLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVER 179
G I R + VD R
Sbjct: 95 GGATIKDRLISVDHAR 110
>gi|408395588|gb|EKJ74767.1| hypothetical protein FPSE_05102 [Fusarium pseudograminearum CS3096]
Length = 319
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 73 RAEQVAYKLEQEIALWDPNSFPNATMDPFKTLFIARVNYDTSESKLRREFEVYGPIKKIV 132
RA Q K E E + S+ D ++ + Y+ SE + F +G +
Sbjct: 5 RAIQALNKKEIENGITPEGSWHTDYRDT-AYVYFGGLPYELSEGDVITIFSQFGEPVWLK 63
Query: 133 MVHNKVTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
+ +K TGK +G+ +++YE +R A + G + GR V VD R +
Sbjct: 64 LARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADMGGRLVSVDHARYKM 113
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 82 EQEIALWDPNSFPNATMDPFKT----LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNK 137
E E L + NA P+ L++ ++++ +E +LR+ FE +G I ++V +
Sbjct: 302 EAEKNLVQSTTTVNAGSGPYSGGARRLYVGNLHFNITEDQLRQVFEPFG-IVELVQLPLD 360
Query: 138 VTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERSRT 182
TG +G+ F+++ D +A +I GR + V +T
Sbjct: 361 ETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKVSTVTDQT 405
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + D + +L F+ +G I+K+ V +P G+AF+EY+ RD A +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV-----WVARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 164 DGKKIDGRRVLVDVERSR 181
DG +I G R V++ +
Sbjct: 60 DGSRICGVRARVELSTGQ 77
>gi|121698007|ref|XP_001267684.1| pre-mRNA splicing factor (Srp1), putative [Aspergillus clavatus
NRRL 1]
gi|119395826|gb|EAW06258.1| pre-mRNA splicing factor (Srp1), putative [Aspergillus clavatus
NRRL 1]
Length = 217
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 102 KTLFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYK 161
TL++ + T L EFE YG + + + + T R +AF+EYE RD AY
Sbjct: 6 TTLYVTGFGHGTRARDLAYEFERYGRLVRCDIPAPR-TPSSRLFAFVEYESRRDADDAYH 64
Query: 162 HADGKKIDGRRVLVDVERSRT 182
K+I GR L+ +E +RT
Sbjct: 65 EMHNKRI-GRDDLLKIEWART 84
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding protein
srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+++ + D + +L F+ +G I+K+ V +P G+AF+EY+ RD A +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV-----WVARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 164 DGKKIDGRRVLVDV 177
DG +I G R V++
Sbjct: 60 DGSRICGVRARVEL 73
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 236 RARSGSNDRERERERRRSRSRERKRRTSRSRSRDRRRRRSRERIRDDDIEEVEFRPKDRS 295
R R+G RERER++ + RE +R S D+ R + R++ RD +E + RS
Sbjct: 18 RDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDKRDKE-----RTRS 72
Query: 296 DRDRDRDRKRRR--ERENSEDRNERKRDRKERRKERERNNE 334
RD +RDR R R +RE DR+ RD ER KERER+ E
Sbjct: 73 SRDDERDRARERTKDREKERDRDHEGRD-AEREKERERDKE 112
>gi|346321453|gb|EGX91052.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 323
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
++ + Y+ SE + F +G + +V +K +GK +G+ +++YE+++ A +
Sbjct: 35 VYFGGLPYELSEGDVITIFSQFGEPVFLKLVRDKESGKSKGFGWLKYENQKSTDLAVDNL 94
Query: 164 DGKKIDGRRVLVDVER 179
G ++ GR + VD R
Sbjct: 95 GGAQVGGRLLRVDHAR 110
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++ + SE LR+ FE +G ++ +V V TG +G+ F+++ D +A
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVE-LVQVPRDETGLCKGFGFVQFARLEDARNALNLN 345
Query: 164 DGKKIDGRRVLVDVERSRT 182
+I GR + V +T
Sbjct: 346 GQLEIAGRAIKVSAVTDQT 364
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
L++ ++ + SE LR+ FE +G ++ +V V TG +G+ F+++ D +A
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVE-LVQVPRDETGLCKGFGFVQFARLEDARNALNLN 345
Query: 164 DGKKIDGRRVLVDVERSRT 182
+I GR + V +T
Sbjct: 346 GQLEIAGRAIKVSAVTDQT 364
>gi|443927303|gb|ELU45810.1| peptidyl-prolyl cis-trans isomerase-like 4 [Rhizoctonia solani AG-1
IA]
Length = 1002
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 17 DPVPYLPPVEKLPHEKKTHG--YSGIAAFLNEFEDPKDTPPPTRVETREERLERRRRERA 74
DP P P + +P+E T +G + E EDP T P EE E+ RRERA
Sbjct: 724 DPFPDPPGL-IVPNEVPTKAPDLTGTNVRIGEDEDPLATLP-------EEEAEKIRRERA 775
Query: 75 EQVAYKLEQEIALWDPNSFPNATM-DPFKTLFIARVNYDTSESKLRREFEVYGPIKKIVM 133
A L E+ P A + P LF+ ++N T + L F +G I +
Sbjct: 776 AAAA-ALTLEMV----GDLPFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGVIMSCQI 830
Query: 134 VHNKVTGKPRGYAFIEYEHERD---MHS--AYKHA 163
+ +K TG YAFIE++ D H+ YKH+
Sbjct: 831 IRDKKTGDSLQYAFIEFDKREDAEQCHTWLLYKHS 865
>gi|71032247|ref|XP_765765.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352722|gb|EAN33482.1| RNA-binding protein, putative [Theileria parva]
Length = 310
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 104 LFIARVNYDTSESKLRREFEVYGPIKKIVMVHNKVTGKPRGYAFIEYEHERDMHSAYKHA 163
+FI +++ +E + F +G I + +K TGK GY F+ Y+ +R A +
Sbjct: 41 IFIGGLDHRMTEGDIIIVFSQFGEPIDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNF 100
Query: 164 DGKKIDGRRVLVD 176
+G + GRR+ VD
Sbjct: 101 NGSTLLGRRIRVD 113
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,185,409,308
Number of Sequences: 23463169
Number of extensions: 294504407
Number of successful extensions: 4587227
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 39066
Number of HSP's successfully gapped in prelim test: 38303
Number of HSP's that attempted gapping in prelim test: 2360494
Number of HSP's gapped (non-prelim): 821863
length of query: 363
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 219
effective length of database: 8,980,499,031
effective search space: 1966729287789
effective search space used: 1966729287789
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)