Query psy16188
Match_columns 395
No_of_seqs 202 out of 1304
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 22:59:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16188.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16188hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2877|consensus 100.0 5.3E-93 1.2E-97 697.6 27.5 369 4-387 2-376 (389)
2 PLN02359 ethanolaminephosphotr 100.0 2.9E-90 6.3E-95 695.1 37.9 368 9-394 1-389 (389)
3 PTZ00307 ethanolamine phosphot 100.0 4.6E-88 1E-92 682.6 33.3 375 5-395 13-417 (417)
4 PLN03039 ethanolaminephosphotr 100.0 1.5E-74 3.2E-79 572.1 30.2 315 61-393 1-336 (337)
5 COG5050 EPT1 sn-1,2-diacylglyc 100.0 6.8E-70 1.5E-74 521.4 28.0 365 10-394 2-383 (384)
6 PF01066 CDP-OH_P_transf: CDP- 99.6 9.2E-16 2E-20 127.3 9.5 75 52-145 2-76 (101)
7 COG0558 PgsA Phosphatidylglyce 99.4 9E-12 2E-16 115.1 16.6 114 51-186 11-125 (192)
8 COG1183 PssA Phosphatidylserin 99.0 9.2E-10 2E-14 104.5 9.8 84 53-156 10-93 (234)
9 TIGR00560 pgsA CDP-diacylglyce 99.0 5.7E-09 1.2E-13 95.8 13.4 81 54-148 3-83 (182)
10 KOG3240|consensus 98.9 3E-08 6.6E-13 90.4 13.9 105 53-187 14-118 (218)
11 TIGR00473 pssA CDP-diacylglyce 98.8 4.7E-08 1E-12 87.1 9.6 74 59-152 1-74 (151)
12 PLN02558 CDP-diacylglycerol-gl 98.7 3.4E-08 7.3E-13 92.1 8.8 78 54-148 11-88 (203)
13 PRK10832 phosphatidylglyceroph 98.7 5.6E-08 1.2E-12 89.3 9.1 72 54-142 5-76 (182)
14 PLN02794 cardiolipin synthase 98.5 2.5E-07 5.3E-12 91.3 8.7 74 54-147 144-217 (341)
15 KOG1617|consensus 97.5 0.00022 4.8E-09 66.8 6.1 73 54-147 70-143 (243)
16 KOG1580|consensus 47.7 15 0.00033 35.4 2.6 32 98-129 297-328 (337)
17 PF04535 DUF588: Domain of unk 44.7 1.8E+02 0.004 25.4 9.0 94 59-152 11-107 (149)
18 COG0053 MMT1 Predicted Co/Zn/C 31.4 4.8E+02 0.01 25.8 10.5 57 93-149 115-171 (304)
19 PRK09509 fieF ferrous iron eff 29.0 5.5E+02 0.012 25.0 10.7 31 117-147 137-167 (299)
20 TIGR01297 CDF cation diffusion 28.8 1.9E+02 0.0041 27.4 7.0 54 94-147 93-146 (268)
21 PRK15065 PTS system mannose-sp 21.6 2E+02 0.0044 28.1 5.6 75 36-124 161-251 (262)
22 TIGR00822 EII-Sor PTS system, 20.8 1.6E+02 0.0036 28.7 4.8 60 35-108 159-218 (265)
No 1
>KOG2877|consensus
Probab=100.00 E-value=5.3e-93 Score=697.62 Aligned_cols=369 Identities=33% Similarity=0.600 Sum_probs=328.5
Q ss_pred cccccCcccCHhhhhhhhccccccCCCCccchhhhchhHHHHHhhcccccCchHHHHHHHHHHHHHHHHHHHHccccccc
Q psy16188 4 ANLFNYKYLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSFVWLSFYDYHYYAS 83 (395)
Q Consensus 4 ~~~~~~~~l~~~~l~~l~~ykY~~~d~s~l~~~v~~p~w~~~~~~~P~~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~ 83 (395)
+.+..+++++++|+++||||||+++|+|++++|++||||||+++.+|+|+|||+||++|+++++.+.+++.+|+|++++
T Consensus 2 ~~~~~~~~l~~~~l~~L~~hkYs~vD~S~Ls~yvl~pfW~~~v~~~P~wmAPNlITL~Gl~~~v~~~Ll~~~ydP~~~~- 80 (389)
T KOG2877|consen 2 KAKLMGEILSPEQLKRLDEHKYSAVDNSLLSKYVLQPFWNWLVKVFPLWMAPNLITLIGLIFNVITVLLLLYYDPNLDE- 80 (389)
T ss_pred ccccccCccCHHHHhhHhhccccccCcchhhhhhhhHHHHHHHHHcccccCchHHHHHHHHHHHHHHHHHHhcCcccCC-
Confidence 3567789999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred cCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHHHHHHHHHHHHHHcCCCCCCcchh
Q psy16188 84 SLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFR 163 (395)
Q Consensus 84 ~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (395)
++|+|+|+.+|+++|+||++|++|||||||||+||||||+|||||||+++++.++.+++++|+| .++.+
T Consensus 81 --------~~P~W~y~a~alglFlYqTlDaiDGkQARRTnsSsPLGELFDHG~DS~stvf~~l~~~s~~~~G---~~~~~ 149 (389)
T KOG2877|consen 81 --------PAPRWTYFAAALGLFLYQTLDAIDGKQARRTNSSSPLGELFDHGCDSISTVFVTLAVCSAFGLG---TSPYW 149 (389)
T ss_pred --------CCCcHHHHHHHHHHHHHHhcccccchhhccCCCCCCcHhhhcccchhHHHHHHHHHHHHHhCCC---CCcch
Confidence 3899999999999999999999999999999999999999999999999999999999999987 45678
Q ss_pred HHHHHHHHHHHHHHHHhhHhhcceeeccccc-chhhHHHHHHHHHhhcccceeeeecccc-ccchhHHHHHHHHHHHHhh
Q psy16188 164 MYLICWNVFISFYASHWEKYNTGVLYLPWSY-DLSMLGTTVVFWVTGYYGIEFWKVYLYR-DITLGHLLEITFYVSSFIS 241 (395)
Q Consensus 164 ~~~~~~~~~~~fy~~~We~y~tg~l~l~~g~-~e~~~~~~~~~l~t~~~G~~~w~~~i~~-~~~~~~~~~~~~~~~~~~~ 241 (395)
+++.++++++.||++||||||||+|+||+.. +|+|+.+++++++|+++|+++|++++.. .++.+..+...++.++.+.
T Consensus 150 ~~~~~~~~~~~FY~ahWe~Y~Tg~L~l~~~~gtEgq~~i~~~~l~Tai~G~~~W~~~i~~~~~~~~~~~~~~~~~~~~~~ 229 (389)
T KOG2877|consen 150 LFLFQFASLVLFYLAHWEEYHTGTLRLGRFDGTEGQVSIIIVHLLTAIVGPEFWHTPIPTNDVGTKLKYLYALITFALIL 229 (389)
T ss_pred HHHHHHHHHHHHHHcchhheecceEEEEEEeccchhHHHHHHHHHHHHhcHHHHhccCcccchhHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999844 9999999999999999999999999872 2555555566666666666
Q ss_pred hHHHHHHhhhhhhccCCCCCCChHHhhhhhhHHHHHHHHHHHHHhc---CCccccccCchhhhHHHHHHHHHHHHHHHHH
Q psy16188 242 NLPVVIYNIYHSYKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVRT---SPNDIMDLDPRAVFITTGTIFSNICCRLIVA 318 (395)
Q Consensus 242 ~~~~~~~nv~~~~~~~~~k~~s~~~~l~~l~p~~~~~~~~~~w~~~---sp~~i~~~~p~~~~~~~G~~fa~i~~rlIva 318 (395)
+.+....|++++.++ +|++|..++.+++.|...+......|.+. ||+++++.||+++++++|++||++++|+|+|
T Consensus 230 ~~~~~~~nV~~~~~~--~kngS~~~~~s~l~p~~~l~~~~~~~~~~~~~s~~~~~e~h~~~fiL~fG~vfa~~t~rlIva 307 (389)
T KOG2877|consen 230 NSLINYTNVIKAGGS--GKNGSTIAGTSVLSPSVPLLGVVLFWAMIASKSPLNVFEPHPILFILMFGFVFAKVTGRLIVA 307 (389)
T ss_pred HHHHhhhheeeeccc--cCCcceeeccccccchHHHHHHHHHHHHHhhcChhhhccccHHHHHHHHHHHHHHHhhheeee
Confidence 667788888877655 38899998899998887777777777776 8889999999999999999999999999999
Q ss_pred HhhcCCccchhHHH-HHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCceEE
Q psy16188 319 QMSNTRCDAFNWLL-VAQAVDIVLSSFFVGMPRAELCLLYVFCTVALLAHIHYGSCVVRQMCKHFKIRVF 387 (395)
Q Consensus 319 hm~k~~~~~~~~~l-~pl~~~~~~~~~~~~~~~~E~~lL~~~~~~~~~~~~hy~~~Vi~qi~~~L~I~~F 387 (395)
||||+|+|++|+++ .|++......+.. ..+..|..+++..++.+..+|+||+.+|++|+|+|++|++|
T Consensus 308 hmt~s~~~l~n~~~l~p~l~~~~~~~~~-~~~~~e~~ll~~~~~~~~~~~~~~~l~v~~~f~~h~~i~i~ 376 (389)
T KOG2877|consen 308 HMTKSEFPLWNWPLLGPLLLLLLQYFNF-YVDRYEYGLLWIALVWSTLGYLHYCLGVVLQFCRHLIIYIF 376 (389)
T ss_pred ecccCCccccChHHHHHHHHHHHHHHHH-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999855 7887555543322 23356999999999999999999999999999998877733
No 2
>PLN02359 ethanolaminephosphotransferase
Probab=100.00 E-value=2.9e-90 Score=695.11 Aligned_cols=368 Identities=27% Similarity=0.506 Sum_probs=320.8
Q ss_pred CcccCHhhhhhhhccccccCCCCccchhhhchhHHHHHhhcccccCchHHHHHHHHHHHHHHHHHHHHccccccccCCCC
Q psy16188 9 YKYLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHP 88 (395)
Q Consensus 9 ~~~l~~~~l~~l~~ykY~~~d~s~l~~~v~~p~w~~~~~~~P~~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+.|++||++++||+|||+++|+|++++|+++|+||++++++|+|+|||++|++|+++++++.++..+++|+++++
T Consensus 1 m~yI~~~~L~~L~~YkY~~~d~S~l~~~vl~p~w~~~v~~~P~~~aPN~iTl~G~~~~~~~~~~~~~~~p~~~~~----- 75 (389)
T PLN02359 1 MGYIGAHGVAALHRYKYSGVDHSYVAKYVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLTSALLGYIYSPHLDTP----- 75 (389)
T ss_pred CceeCHHHHhHHhhCCCcCCCccHHHHHHhHHHHHHHHHhCcCCCCCCchHHHHHHHHHHHHHHHHHhCcccccC-----
Confidence 368999999999999999999999999999999999999999999999999999999999999999999988753
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHHHHHHHHHHHHHHcCCCCCCcchhHHHHH
Q psy16188 89 NYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFRMYLIC 168 (395)
Q Consensus 89 ~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (395)
.|+|+++.+|+++|+||++|++|||||||||+|||+||+|||||||+++.+..+..+++.+.|. . .++..
T Consensus 76 ----~P~w~~~~~a~~lfly~~~D~~DGkqARrt~~ssplGelfDHg~D~~~~~~~~~~~~~~~~~g~---~---~~~~~ 145 (389)
T PLN02359 76 ----PPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFETMAFGSTAMCGR---D---TFWFW 145 (389)
T ss_pred ----CccHHHHHHHHHHHHHHHHHhccHHHHhhcCCCCCchhHHhhhhHHHHHHHHHHHHHHHhccch---H---HHHHH
Confidence 8999999999999999999999999999999999999999999999999999999888877663 2 23445
Q ss_pred HHHHHHHHHHHhhHhhcceeeccc--ccchhhHHHHHHHHHhhcccceeeeecccc------------ccchhHHHHHHH
Q psy16188 169 WNVFISFYASHWEKYNTGVLYLPW--SYDLSMLGTTVVFWVTGYYGIEFWKVYLYR------------DITLGHLLEITF 234 (395)
Q Consensus 169 ~~~~~~fy~~~We~y~tg~l~l~~--g~~e~~~~~~~~~l~t~~~G~~~w~~~i~~------------~~~~~~~~~~~~ 234 (395)
++.+++||++||||||||+|+||+ |++|+|+.++.++++|+++||++|++++.. +.+..++.....
T Consensus 146 ~~~~~~Fy~~~We~y~Tg~l~l~~~~g~tEg~~~~~~~~~~t~i~G~~~W~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 225 (389)
T PLN02359 146 VISAVPFYGATWEHFFTNTLILPVINGPTEGLMLIYCAHFFTAIVGAEWWAQDFGKSIPFLSWVPFVSEIQTYRIVLFLM 225 (389)
T ss_pred HHHHHHHHHHHHHHHhcCeEecCCCCcccHHHHHHHHHHHHHHhcCcHHhcccccccccccccccccccccHHHHHHHHH
Confidence 567899999999999999999997 899999999999999999999999998642 123444433323
Q ss_pred HHHHHhhhHHHHHHhhhhhhccCCCCCCChHHhhhhhhHHHHHHHHHHHHHhcCCccccccCchhhhHHHHHHHHHHHHH
Q psy16188 235 YVSSFISNLPVVIYNIYHSYKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVRTSPNDIMDLDPRAVFITTGTIFSNICCR 314 (395)
Q Consensus 235 ~~~~~~~~~~~~~~nv~~~~~~~~~k~~s~~~~l~~l~p~~~~~~~~~~w~~~sp~~i~~~~p~~~~~~~G~~fa~i~~r 314 (395)
.+++.+.+++.+++|+++..+ +|+++..++++++.|++.++.+...|.+.||++++++|||++++++|+++|+++||
T Consensus 226 ~~~~~~~~~~~~i~nv~~~~~---~k~~s~~~~l~~l~P~~~~~~~~~~w~~~sps~i~~~~p~l~~~~~G~~~a~~v~r 302 (389)
T PLN02359 226 IAFAVIPTVAFNVSNVYKVVQ---ARKGSMLLALAMLYPFVTLLGGVLIWDYLSPSDLMRNYPHLVVLGTGLAFGFLVGR 302 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---hcCCChHHHHhHHHHHHHHHHHHHHHHHhChHhHHHcCchHHHHHHHHHHHHHHHH
Confidence 333335566677777777654 47788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCccchhHHH-----HHHHHHHH-HHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCceEE
Q psy16188 315 LIVAQMSNTRCDAFNWLL-----VAQAVDIV-LSSFF-VGMPRAELCLLYVFCTVALLAHIHYGSCVVRQMCKHFKIRVF 387 (395)
Q Consensus 315 lIvahm~k~~~~~~~~~l-----~pl~~~~~-~~~~~-~~~~~~E~~lL~~~~~~~~~~~~hy~~~Vi~qi~~~L~I~~F 387 (395)
+|+|||||+|+|++|..+ +|+..++. +..++ ..+..+|..++++++++++..|+||+++||+|||+||||+||
T Consensus 303 lIvahmtk~~fp~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~s~~~y~hf~~~Vi~qi~~~L~I~~f 382 (389)
T PLN02359 303 MILAHLCDEPKGLKTNMCMSLLYLPFAIANALTARLNDGVPLVDEFWVLLGYCAFTVSLYLHFATSVIHEITTALGIYCF 382 (389)
T ss_pred HHHHHHhCCCCchhhHHHHhHHHHHHHHHHHHHHhccCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeEE
Confidence 999999999999988643 56665442 22221 134568999999999999999999999999999999999999
Q ss_pred EecCCcC
Q psy16188 388 KIKHNYV 394 (395)
Q Consensus 388 sI~~~~~ 394 (395)
|||||++
T Consensus 383 sI~~~~~ 389 (389)
T PLN02359 383 RITRKEA 389 (389)
T ss_pred EeCCCCC
Confidence 9999874
No 3
>PTZ00307 ethanolamine phosphotransferase; Provisional
Probab=100.00 E-value=4.6e-88 Score=682.56 Aligned_cols=375 Identities=26% Similarity=0.402 Sum_probs=319.1
Q ss_pred ccccCcccCHhhhhhhhccccccCCCCccchhhhchhHHHHHhhcccccCchHHHHHHHHHHHHHHHHHHHHcccccccc
Q psy16188 5 NLFNYKYLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASS 84 (395)
Q Consensus 5 ~~~~~~~l~~~~l~~l~~ykY~~~d~s~l~~~v~~p~w~~~~~~~P~~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
|+..++|++|+|+++||+|||+++|+|++++|+++||||++++++|+|+|||+||++|+++++++..++.+++|++++.
T Consensus 13 ~~~~~~~i~~~~l~~L~~YkYs~~d~S~l~~yvl~pfw~~~v~~~P~~laPN~ITl~G~~~~~~~~~~~~~~~~~~~~~- 91 (417)
T PTZ00307 13 NPLENEYIPPAYLPNLKKYKYSSTDSSIISRYVLQRYWNFIVNLVPMTVAPNCITFTGFLIGMSSAALLLYFYFFEEGV- 91 (417)
T ss_pred cccceeeeCHHHHhHHHhCCCCCCCCCHHHHHhhHHHHHHHHHHccCCCCCCeeeHHhHHHHHHHHHHHHHhcccccCC-
Confidence 6778999999999999999999999999999999999999999999999999999999999999999988898877643
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHHHHHHHHHHHHHHcCCCCCCcchhH
Q psy16188 85 LTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFRM 164 (395)
Q Consensus 85 ~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (395)
.|+|+++.+++++|+||++|++|||||||||+|||+||+||||||++++.+..+.++.+++.+ ++.+
T Consensus 92 --------~p~w~~~~~a~~lfly~~~D~lDGkqARrt~~sSplGelfDhg~D~~~~~~~~~~~~~a~~~~-----~~~~ 158 (417)
T PTZ00307 92 --------YPSWVLYYAAFALFAYQTLDAIDGKQARRTGTGSPLGELFDHGCDAFLTPFVLLNVSLATYMT-----PVER 158 (417)
T ss_pred --------CccHHHHHHHHHHHHHHHHhhcchHHhhhcCCCCCchhHHHhhhhHHHHHHHHHHHHHHhcCC-----cHHH
Confidence 799999999999999999999999999999999999999999999999999999998888754 4556
Q ss_pred HHHHHHHHHHHHHHHhhHhhcceeecc--cccchhhHHHHHHHHHhhcccceeeeecccc--ccchhHHHHHHHH-----
Q psy16188 165 YLICWNVFISFYASHWEKYNTGVLYLP--WSYDLSMLGTTVVFWVTGYYGIEFWKVYLYR--DITLGHLLEITFY----- 235 (395)
Q Consensus 165 ~~~~~~~~~~fy~~~We~y~tg~l~l~--~g~~e~~~~~~~~~l~t~~~G~~~w~~~i~~--~~~~~~~~~~~~~----- 235 (395)
+...+...++||++||||||||+|++| +|++|+|+.++.++++|+++|+++|++++.. +++...++...+.
T Consensus 159 ~~~~~~~~~~fy~~~Weey~Tg~l~l~~~~GptEg~l~~~~~~~~t~~~G~~~W~~~~~~~~~l~~~~~~~~~~~~~~~~ 238 (417)
T PTZ00307 159 FWLSTISSMSLFTAIWEQFSTGTFDLGYVNGPTEGIILNCVLFIVSGVYGESIWDTPAVGPYDVAYPPVLSSFFPGCSGT 238 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEecCcCCCcHHHHHHHHHHHHHHhcchHHhccccccccccccchhHHHHHhccccc
Confidence 666677788999999999999999999 4899999999999999999999999998853 2221111111111
Q ss_pred -----------HHHHhhhHHHHHHhhhhhhccCCCCCCChHHhhhhhhHHHHHHHHHHHHHhcCCccccccCchhhhHHH
Q psy16188 236 -----------VSSFISNLPVVIYNIYHSYKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVRTSPNDIMDLDPRAVFITT 304 (395)
Q Consensus 236 -----------~~~~~~~~~~~~~nv~~~~~~~~~k~~s~~~~l~~l~p~~~~~~~~~~w~~~sp~~i~~~~p~~~~~~~ 304 (395)
....+.+.+++++|+++++|+ ++|+.+..+++++++|+++. .....|...+|++++++||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~-~~~~~~~~~~~~~llP~~~~-~~~~~w~~~~~s~i~~~~p~l~~~~~ 316 (417)
T PTZ00307 239 VHIESVRSVLFLLFLVSCPFTILTNVVHVVLR-PTVHASKVTPMLAALPILTM-TALHVHVFVVFPNLHVKFPFALELSY 316 (417)
T ss_pred ccccchhhHHHHHHHHhhHHHHHHHHHHHHHh-cCCCCchHHHHHHHHHHHHH-HHHHHHHHHccchHHhhCChHHHHHH
Confidence 112244557899999999886 44566777899999999666 56778888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccchhHHHHHHHH-HHHHHhcCC--C----ChhHHHHHHHHHHHHHHH---HHHHHHHHH
Q psy16188 305 GTIFSNICCRLIVAQMSNTRCDAFNWLLVAQAV-DIVLSSFFV--G----MPRAELCLLYVFCTVALL---AHIHYGSCV 374 (395)
Q Consensus 305 G~~fa~i~~rlIvahm~k~~~~~~~~~l~pl~~-~~~~~~~~~--~----~~~~E~~lL~~~~~~~~~---~~~hy~~~V 374 (395)
|++||+++||||+|||||+|+|++|++++|++. +++...+++ . ....|..++|.+++++.. .|.||+++|
T Consensus 317 G~vfa~~v~RmIvAhmtk~~fp~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~Y~~f~~~V 396 (417)
T PTZ00307 317 GLLMSITVTRLTLARLSAMPYRTFNWHIVITFLALTAASLMHYAGDASVEHKYVEPSLGWALTGLAVFAAWQYGHMILSA 396 (417)
T ss_pred HHHHHHHhhheeeeeccCCCCcchhhHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999999876 332332321 1 234566788876666655 666999999
Q ss_pred HHHHHhhcCceEEEecCCcCC
Q psy16188 375 VRQMCKHFKIRVFKIKHNYVR 395 (395)
Q Consensus 375 i~qi~~~L~I~~FsI~~~~~~ 395 (395)
|+|||+||||+|||||||+++
T Consensus 397 i~qIc~~L~I~cfsIk~~~~~ 417 (417)
T PTZ00307 397 FTQIARYLSISIMSIKPRKSD 417 (417)
T ss_pred HHHHHhhhCceEEEecCCCCC
Confidence 999999999999999998763
No 4
>PLN03039 ethanolaminephosphotransferase; Provisional
Probab=100.00 E-value=1.5e-74 Score=572.08 Aligned_cols=315 Identities=25% Similarity=0.412 Sum_probs=264.5
Q ss_pred HHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHH
Q psy16188 61 VGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWT 140 (395)
Q Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~ 140 (395)
.||.+.+.+++++.+|+|+++++ .|+|+|+.+|+++|+|||+|++|||||||||+|||+||+|||||||++
T Consensus 1 ~GF~fiv~~~~l~~~y~p~~~~~---------~P~w~~~~~a~~lf~YqtlD~~DGkqARRt~~sspLGelfDHg~Ds~~ 71 (337)
T PLN03039 1 MGFMFLLTSALLGYIYSPKLDSP---------PPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALA 71 (337)
T ss_pred CceeehHHHHHHHHhcCCCcCCC---------CCCCHHHHHHHHHHHHHHHhhcchhhhcccCCCCCchHhHhcchhHHH
Confidence 38899999999999999998764 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHHHHHhhHhhcceeeccc--ccchhhHHHHHHHHHhhcccceeeee
Q psy16188 141 AMFVPALLYSIFGRSDFSVSPFRMYLICWNVFISFYASHWEKYNTGVLYLPW--SYDLSMLGTTVVFWVTGYYGIEFWKV 218 (395)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fy~~~We~y~tg~l~l~~--g~~e~~~~~~~~~l~t~~~G~~~w~~ 218 (395)
+.+..+..+++.+.|. .. +...+..+++||++||||||||+|++|+ |++|+|+.++.++++|+++|||+|++
T Consensus 72 ~~~~~~~~~~~~~~g~---~~---~~~~~~~~~~fy~~~We~y~tg~l~l~~~~g~~e~~~~~~~~~~~t~~~G~~iW~~ 145 (337)
T PLN03039 72 CAFEAMAFGSTAMCGR---DT---FWFWVISAIPFFGATWEHYFTNTLILPVINGPTEGLALIFCGHFFTAIVGAEWWAQ 145 (337)
T ss_pred HHHHHHHHHHHhccCc---hH---HHHHHHHHHHHHHHHHHHheeeEEEecCcCCCcHHHHHHHHHHHHHHhcCHHHhcC
Confidence 9999998887776653 22 2234567899999999999999999997 89999999999999999999999999
Q ss_pred cccccc------------chhHHHHHHHHHHHHhhhHHHHHHhhhhhhccCCCCCCChHHhhhhhhHHHHHHHHHHHHHh
Q psy16188 219 YLYRDI------------TLGHLLEITFYVSSFISNLPVVIYNIYHSYKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVR 286 (395)
Q Consensus 219 ~i~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~k~~s~~~~l~~l~p~~~~~~~~~~w~~ 286 (395)
++..++ +......+..++++.+.+++.+++|++++++ +|+++..+++++++|++.++.+...|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~nv~~~~~---~k~~s~~~~~~~l~P~~~~~~~~~~w~~ 222 (337)
T PLN03039 146 PFGKSIPLFSWVPFLNEIQMSRAILFMMIAFAVIPTLAFNTSNVYKVVH---SRNGSMLLALAMLYPFVTLIAGVLIWDY 222 (337)
T ss_pred ccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 864211 1111122222333334455566677777655 4778899999999999999999999999
Q ss_pred cCCccccccCchhhhHHHHHHHHHHHHHHHHHHhhcCCccchhHHHH-----HHHHHHH-HHhcC-CCChhHHHHHHHHH
Q psy16188 287 TSPNDIMDLDPRAVFITTGTIFSNICCRLIVAQMSNTRCDAFNWLLV-----AQAVDIV-LSSFF-VGMPRAELCLLYVF 359 (395)
Q Consensus 287 ~sp~~i~~~~p~~~~~~~G~~fa~i~~rlIvahm~k~~~~~~~~~l~-----pl~~~~~-~~~~~-~~~~~~E~~lL~~~ 359 (395)
.||++++++|||++++++|+++|+++||+|+|||||+|+|++|..+. |+.+... +..++ ..+...|..+++++
T Consensus 223 ~sp~~i~~~~p~l~~~~~G~~~a~~v~rlIvahmtk~~~p~~~~~~~~~l~~p~~l~~~l~~~~~~g~~~~~e~~~l~~~ 302 (337)
T PLN03039 223 LSPIDLIANYPHLVVLGTGLAFGFLVGRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNAGVPLVDEFWVLLGY 302 (337)
T ss_pred hChHHHHHcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997554 3322221 23331 03467899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCceEEEecCCc
Q psy16188 360 CTVALLAHIHYGSCVVRQMCKHFKIRVFKIKHNY 393 (395)
Q Consensus 360 ~~~~~~~~~hy~~~Vi~qi~~~L~I~~FsI~~~~ 393 (395)
+++++..|+||+++||+|||+||||+||||||||
T Consensus 303 ~~~s~~~y~hf~~~Vi~qi~~~L~I~~fsIk~~~ 336 (337)
T PLN03039 303 CIFTLSLYAHFATSVIHEITEALGIYCFRITRKE 336 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCceEEEecCCC
Confidence 9999999999999999999999999999999986
No 5
>COG5050 EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases [Lipid metabolism]
Probab=100.00 E-value=6.8e-70 Score=521.37 Aligned_cols=365 Identities=30% Similarity=0.515 Sum_probs=298.3
Q ss_pred cccCHhhhhhhhccccccCCCCccchhhhchhHHHHHhhcccccCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCC
Q psy16188 10 KYLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPN 89 (395)
Q Consensus 10 ~~l~~~~l~~l~~ykY~~~d~s~l~~~v~~p~w~~~~~~~P~~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
..+++++.++||+|||+++|+|++++|+++|||+|+.+.+|.|+|||+||+.|+++++++.+...+|+|.++.
T Consensus 2 m~i~~~~is~l~~y~y~~~DrSlLs~y~L~pfw~~ll~viP~~mAPNliTL~Gl~fiv~nvlt~l~ydp~~~~------- 74 (384)
T COG5050 2 MHITSRRISRLKKYKYQSEDRSLLSKYFLKPFWVPLLRVIPYWMAPNLITLCGLIFIVANVLTTLYYDPCLSV------- 74 (384)
T ss_pred CCCCHHHHHHHHhhhccccchhhhhHHhhHHHHHHHHHHcccccCchHHHHHHHHHHHHHHHHHHhcccccCC-------
Confidence 4689999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHHHHHHHHHHHHHHcCCCCCCcchhHHHHHH
Q psy16188 90 YPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFRMYLICW 169 (395)
Q Consensus 90 ~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (395)
+.|+|.|+..++++|+||++||+||.||||||++|||||+||||.|++++.+..+.+++++|+|. ++...+..+
T Consensus 75 --~~~~w~yfs~alg~FlYqtfD~lDG~qARRTGt~spLGeLFDH~vDsint~l~~i~~~s~~g~g~----s~~~i~~qf 148 (384)
T COG5050 75 --DGPRWTYFSYALGLFLYQTFDALDGRQARRTGTGSPLGELFDHGVDSINTTLSAIIFVSAFGMGE----SFLLILSQF 148 (384)
T ss_pred --CcchhHHHHHHHHHHHHhhccccccHhhhcCCCCCCcHHHHhhhHHHHHHHHHHHHHHHHhcCCC----cHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999874 345566778
Q ss_pred HHHHHHHHHHhhHhhcceeeccc--ccchhhHHHHHHHHHhhcccce-eeeeccc-cccc--------hhHHHHHHHHHH
Q psy16188 170 NVFISFYASHWEKYNTGVLYLPW--SYDLSMLGTTVVFWVTGYYGIE-FWKVYLY-RDIT--------LGHLLEITFYVS 237 (395)
Q Consensus 170 ~~~~~fy~~~We~y~tg~l~l~~--g~~e~~~~~~~~~l~t~~~G~~-~w~~~i~-~~~~--------~~~~~~~~~~~~ 237 (395)
+.++.||.++|||||||+|+|+. |+.||.+.+++.+++|+++|++ +|+.... +++. +++. .......
T Consensus 149 A~l~~FYlstwEEyhTg~lyLa~fsGpvEgIv~~~g~~~~t~i~Gk~~fwH~~~~sf~~~~~~~~~~t~gs~-~~a~v~~ 227 (384)
T COG5050 149 APLFVFYLSTWEEYHTGTLYLARFSGPVEGIVLVCGSFIATGIYGKQLFWHTYAGSFEWLRKVFDVPTLGSC-TFAFVCV 227 (384)
T ss_pred HHHHHHHHHHHHHHhcceEEEEEecCCcceeeehhHHHHHHhhccccceeeccccceeceeeeeeehhhhcc-hHHHHHH
Confidence 88999999999999999999995 8999999999999999999964 7865432 1111 1111 1111122
Q ss_pred HHhhhHHHHHHhhhhhhccCCCCCCCh---HHhhhhhhHHHHHHHHHHHHHhcCCccccccCchhhhHHHHHHHHHHHHH
Q psy16188 238 SFISNLPVVIYNIYHSYKTGTGKNRPL---LEAMRPLYPLVAFVALSYYWVRTSPNDIMDLDPRAVFITTGTIFSNICCR 314 (395)
Q Consensus 238 ~~~~~~~~~~~nv~~~~~~~~~k~~s~---~~~l~~l~p~~~~~~~~~~w~~~sp~~i~~~~p~~~~~~~G~~fa~i~~r 314 (395)
++..+...+..|..+.++++ ..+.+. .+++.+++|++..++.........|+-+- ...+..+|+.+|..++|
T Consensus 228 ~ll~n~v~~~~n~l~~~~~~-~~~~~~~~~~Sai~gllpFf~~~v~i~tl~~~qp~fI~----l~~il~~gf~~A~~vgr 302 (384)
T COG5050 228 ALLSNGVCAFRNALFYYERT-ANNCALILHLSAILGLLPFFAYFVSIFTLVPTQPSFIT----LALILLYGFIFAFRVGR 302 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHhhhHHHHHHHHHHHHHHhcchHHHH----HHHHHHhhhhhhhhhhh
Confidence 23445556667776666552 122222 45777999999888887776666665332 35677899999999999
Q ss_pred HHHHHhhcCCccchhH-HHHHHHHHHHHHh-cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCceEEEecCC
Q psy16188 315 LIVAQMSNTRCDAFNW-LLVAQAVDIVLSS-FFVGMPRAELCLLYVFCTVALLAHIHYGSCVVRQMCKHFKIRVFKIKHN 392 (395)
Q Consensus 315 lIvahm~k~~~~~~~~-~l~pl~~~~~~~~-~~~~~~~~E~~lL~~~~~~~~~~~~hy~~~Vi~qi~~~L~I~~FsI~~~ 392 (395)
+|++|.+++|+|++|. .+.|+.+-++.+. ++.+....| -+.|..++++...|.-+...++.++++.|||+|++|||+
T Consensus 303 vIvshit~~~fp~~n~p~L~plvl~av~~~~~~vq~~~~~-~l~~~~~gLs~gvh~~f~~~iI~~~te~L~i~~LsI~~s 381 (384)
T COG5050 303 VIVSHITTQPFPMFNPPLLIPLVLYAVPQYSFGVQKNVVE-ALVWSGLGLSLGVHGMFFNDIIRCFTEWLGIYALSIKKS 381 (384)
T ss_pred hhhcccccCCCcccChhHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceeeccccc
Confidence 9999999999999998 5678665555443 331111222 346888999999999999999999999999999999988
Q ss_pred cC
Q psy16188 393 YV 394 (395)
Q Consensus 393 ~~ 394 (395)
|+
T Consensus 382 K~ 383 (384)
T COG5050 382 KA 383 (384)
T ss_pred cC
Confidence 75
No 6
>PF01066 CDP-OH_P_transf: CDP-alcohol phosphatidyltransferase; InterPro: IPR000462 A number of phosphatidyltransferases, which are all involved in phospholipid biosynthesis and that share the property of catalyzing the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond share a conserved sequence region [, ]. These enzymes are proteins of 200 to 400 amino acid residues. The conserved region contains three aspartic acid residues and is located in the N-terminal section of the sequences.; GO: 0016780 phosphotransferase activity, for other substituted phosphate groups, 0008654 phospholipid biosynthetic process, 0016020 membrane
Probab=99.64 E-value=9.2e-16 Score=127.32 Aligned_cols=75 Identities=36% Similarity=0.624 Sum_probs=65.9
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhh
Q psy16188 52 WLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGEL 131 (395)
Q Consensus 52 ~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~l 131 (395)
|++||++|+.|+++++.+....... .| +..++++++++..+|++||++|||+|++||+|++
T Consensus 2 ~~~pN~iT~~~~~~~~~~~~~~~~~----------------~~---~~~~~~l~~~~~~~D~~DG~lAR~~~~~S~~G~~ 62 (101)
T PF01066_consen 2 WITPNAITLLRLLLGFLAALLLLQG----------------RP---LLLAALLLFLAFLLDGLDGWLARRRNQSSPFGAY 62 (101)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHc----------------cH---HHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHH
Confidence 6789999999999999888765422 11 4678888999999999999999999999999999
Q ss_pred hhhccchHHHHHHH
Q psy16188 132 FDHGLDSWTAMFVP 145 (395)
Q Consensus 132 fDhg~D~~~~~~~~ 145 (395)
+||.+|+++.....
T Consensus 63 lD~~~D~i~~~~~~ 76 (101)
T PF01066_consen 63 LDSVADRISFVALP 76 (101)
T ss_pred HhHHhHHHHHHHHH
Confidence 99999999998877
No 7
>COG0558 PgsA Phosphatidylglycerophosphate synthase [Lipid metabolism]
Probab=99.41 E-value=9e-12 Score=115.13 Aligned_cols=114 Identities=21% Similarity=0.183 Sum_probs=79.6
Q ss_pred cccCchHHHHHH-HHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcch
Q psy16188 51 RWLAPNLITFVG-FLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVG 129 (395)
Q Consensus 51 ~~vaPN~iTl~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG 129 (395)
+...||++|+.+ ++..+.... .+.+. .|..+.+++..++...+|.+||+.|||.|+.|++|
T Consensus 11 ~~~~PN~lTl~r~~l~~~~~~~---~~~~~---------------~~~~~~~~~l~~~a~l~D~lDG~lAR~~~~~S~~G 72 (192)
T COG0558 11 LGNTPNQLTLLRIFLIPLFALL---LLLPG---------------LGLLLLALVLFLLAALTDALDGYLARKWGQVSRFG 72 (192)
T ss_pred HhcCcHHHHHHHHHHHHHHHHH---HHHhH---------------HHHHHHHHHHHHHHHHHHHHhHHHHHHhcCCCccc
Confidence 467899999999 444333332 22210 14567777888899999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHHHHHhhHhhcc
Q psy16188 130 ELFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFRMYLICWNVFISFYASHWEKYNTG 186 (395)
Q Consensus 130 ~lfDhg~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fy~~~We~y~tg 186 (395)
+++|+.+|++.+....+.+...... . +.+.....+.--...-|+..+.+...+
T Consensus 73 ~~LDp~~Dk~~~~~~l~~l~~~~~~---~-~~~~~~l~l~r~~~vs~~r~~~~~~g~ 125 (192)
T COG0558 73 AFLDPVADKLLDAALLLGLVALGPV---S-PLWLAILILAREILVSYLRALAASLGG 125 (192)
T ss_pred hhcchhhHHHHHHHHHHHHHHhccc---c-hHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999998777766543211 1 223333333333666677777777654
No 8
>COG1183 PssA Phosphatidylserine synthase [Lipid metabolism]
Probab=99.04 E-value=9.2e-10 Score=104.49 Aligned_cols=84 Identities=33% Similarity=0.427 Sum_probs=71.5
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhh
Q psy16188 53 LAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELF 132 (395)
Q Consensus 53 vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lf 132 (395)
..||.+|..|.++++.+....... + +-.+..++++...+|.+||+.||++|.+|.+|+-+
T Consensus 10 ~~pn~iT~~~~~~G~~sI~~a~~~------------------~--~~~a~~~i~lA~i~DglDG~VAR~~~~~s~~G~~l 69 (234)
T COG1183 10 LLPNLITALGLFLGLLSIVAALEG------------------R--FEAALLLILLALILDGLDGRVARKLNAKSAFGAEL 69 (234)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHhc------------------C--HHHHHHHHHHHHHHcccchHHHHhcCCcchHHHHH
Confidence 569999999999999887654321 1 34566677889999999999999999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHcCCC
Q psy16188 133 DHGLDSWTAMFVPALLYSIFGRSD 156 (395)
Q Consensus 133 Dhg~D~~~~~~~~~~~~~~~~~~~ 156 (395)
|+.+|.++....+..+....+..+
T Consensus 70 DSLaD~VsFgVaPA~l~y~~~~~~ 93 (234)
T COG1183 70 DSLADLVSFGVAPALLLYSSGLNT 93 (234)
T ss_pred hHHHHHHHhhHHHHHHHHHHhccC
Confidence 999999999999999888877653
No 9
>TIGR00560 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
Probab=99.01 E-value=5.7e-09 Score=95.82 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=59.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhh
Q psy16188 54 APNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFD 133 (395)
Q Consensus 54 aPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfD 133 (395)
-||.+|+..++...+-..+ ++.++. .+.+....+.+...+....|.+||..|||.|+.|++|+.+|
T Consensus 3 ipN~lT~~Ri~l~p~~~~~--~~~~~~------------~~~~~~~~a~~l~~~a~~tD~lDG~iAR~~~~~S~~G~~LD 68 (182)
T TIGR00560 3 IPNWLTLFRIIALPIFILF--FLENVL------------PIQVSPFIGALLFIFAAVTDWLDGYLARKWNQVSNFGKFLD 68 (182)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhcc------------cchhhHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHHH
Confidence 3999999999764432222 222211 12233455666667789999999999999999999999999
Q ss_pred hccchHHHHHHHHHH
Q psy16188 134 HGLDSWTAMFVPALL 148 (395)
Q Consensus 134 hg~D~~~~~~~~~~~ 148 (395)
+.+|.+......+.+
T Consensus 69 p~aDk~~~~~~~~~l 83 (182)
T TIGR00560 69 PLADKVLVLAVLIIL 83 (182)
T ss_pred HHhhHHHHHHHHHHH
Confidence 999999887655544
No 10
>KOG3240|consensus
Probab=98.91 E-value=3e-08 Score=90.37 Aligned_cols=105 Identities=25% Similarity=0.432 Sum_probs=77.5
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhh
Q psy16188 53 LAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELF 132 (395)
Q Consensus 53 vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lf 132 (395)
--||.|-....+..++++..+. . .| ..+.++.+....+|+.||.-||+.+|+|.+|+.+
T Consensus 14 ~iPN~iGY~RI~laiisf~vm~-~----------------~p----~~~~~lY~~S~lLDAfDG~aAR~~NQ~S~fGA~L 72 (218)
T KOG3240|consen 14 YIPNLIGYMRIVLAILSFYVMS-S----------------NP----TTFSVLYLLSSLLDAFDGWAARKLNQVSRFGAML 72 (218)
T ss_pred EecchhhHHHHHHHHHHHHHhc-c----------------Cc----cHHHHHHHHHHHHHhhhHHHHHHHhhhhhHHHHH
Confidence 4599999999988888776532 1 11 2344566677899999999999999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHHHHHhhHhhcce
Q psy16188 133 DHGLDSWTAMFVPALLYSIFGRSDFSVSPFRMYLICWNVFISFYASHWEKYNTGV 187 (395)
Q Consensus 133 Dhg~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fy~~~We~y~tg~ 187 (395)
|...|+.++.-+.+.++... ++. +. .+...+.--..+||-+.|+-.
T Consensus 73 DmvTDR~st~~LL~~L~~~Y-------p~~-l~-~fqL~~~lDiaSHwlhm~st~ 118 (218)
T KOG3240|consen 73 DMVTDRCSTACLLVFLCQFY-------PPY-LV-FFQLSMALDIASHWLHMHSTV 118 (218)
T ss_pred HHHHHHhhhHHHHHHHHHHc-------ccH-HH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987766665432 233 33 233446677899999876544
No 11
>TIGR00473 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase. This enzyme, CDP-diacylglycerol--serine O-phosphatidyltransferase, is involved in phospholipid biosynthesis catalyzing the reaction CDP-diacylglycerol + L-serine = CMP + L-1-phosphatidylserine. Members of this family do not bear any significant sequence similarity to the corresponding E.coli protein.
Probab=98.75 E-value=4.7e-08 Score=87.15 Aligned_cols=74 Identities=24% Similarity=0.259 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccch
Q psy16188 59 TFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDS 138 (395)
Q Consensus 59 Tl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~ 138 (395)
|+.|+++++.+....... + +..+++++.+...+|.+||+.|||+|.+|+.|+.+|+.+|.
T Consensus 1 T~~n~~~g~~ai~~~~~~------------------~--~~~a~~~l~~a~~~D~~DG~vAR~~~~~s~~G~~lDsl~D~ 60 (151)
T TIGR00473 1 TMLNAFSGFLSILSLLRY------------------T--IVRACFLILLSMFFDFLDGRVARKTNRVSDFGKELDSLADV 60 (151)
T ss_pred ChHHHHHHHHHHHHHHHC------------------c--HHHHHHHHHHHHHHHHhhHHHHHHcCCCChHHHHHHHHHHH
Confidence 678888888776653211 1 34567778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy16188 139 WTAMFVPALLYSIF 152 (395)
Q Consensus 139 ~~~~~~~~~~~~~~ 152 (395)
++....+..+....
T Consensus 61 vsfgvaPa~l~~~~ 74 (151)
T TIGR00473 61 VSFGVAPAALAYSI 74 (151)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888776654
No 12
>PLN02558 CDP-diacylglycerol-glycerol-3-phosphate/ 3-phosphatidyltransferase
Probab=98.74 E-value=3.4e-08 Score=92.13 Aligned_cols=78 Identities=21% Similarity=0.197 Sum_probs=57.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhh
Q psy16188 54 APNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFD 133 (395)
Q Consensus 54 aPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfD 133 (395)
-||.+|+..++..- .++..++.++ .|-...+.....+....|.+||..|||.|+.|.+|+++|
T Consensus 11 lPN~LT~~RI~liP--~~~~l~~~~~---------------~~~~~~A~~lf~~a~lTD~lDG~lAR~~n~~T~~G~~lD 73 (203)
T PLN02558 11 LPTVLTLGRVAAVP--LLVATFYVDS---------------WWGRTATTSIFIAAAITDWLDGYLARKMKLGTAFGAFLD 73 (203)
T ss_pred hhHHHHHHHHHHHH--HHHHHHHHhc---------------hhHHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHHh
Confidence 39999999997633 3332233211 222344555666789999999999999999999999999
Q ss_pred hccchHHHHHHHHHH
Q psy16188 134 HGLDSWTAMFVPALL 148 (395)
Q Consensus 134 hg~D~~~~~~~~~~~ 148 (395)
...|.+......+.+
T Consensus 74 PiaDKll~~~~~~~l 88 (203)
T PLN02558 74 PVADKLMVAAALILL 88 (203)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999887555544
No 13
>PRK10832 phosphatidylglycerophosphate synthetase; Provisional
Probab=98.71 E-value=5.6e-08 Score=89.28 Aligned_cols=72 Identities=25% Similarity=0.322 Sum_probs=54.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhh
Q psy16188 54 APNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFD 133 (395)
Q Consensus 54 aPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfD 133 (395)
-||.+|+..+++.-. ++..++.+. +|....+.++..+....|.+||..|||.|++|++|+++|
T Consensus 5 ipN~lT~~Ri~l~P~--~~~~~~~~~---------------~~~~~~a~~lf~~a~~TD~lDG~iAR~~~~~S~lG~~LD 67 (182)
T PRK10832 5 IPTLLTLFRVILIPF--FVLVFYLPF---------------TWAPFVCALIFCVAAVTDWFDGFLARRWNQSTRFGAFLD 67 (182)
T ss_pred ccHHHHHHHHHHHHH--HHHHHHHcc---------------chHHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHHh
Confidence 499999999997543 222222110 122345666677889999999999999999999999999
Q ss_pred hccchHHHH
Q psy16188 134 HGLDSWTAM 142 (395)
Q Consensus 134 hg~D~~~~~ 142 (395)
...|.+...
T Consensus 68 PlADKll~~ 76 (182)
T PRK10832 68 PVADKVMVA 76 (182)
T ss_pred HHHHHHHHH
Confidence 999999644
No 14
>PLN02794 cardiolipin synthase
Probab=98.54 E-value=2.5e-07 Score=91.34 Aligned_cols=74 Identities=20% Similarity=0.165 Sum_probs=57.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhh
Q psy16188 54 APNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFD 133 (395)
Q Consensus 54 aPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfD 133 (395)
-||.+|+.++++..+...+ ++. .+ +..+.+.+.+....|.+||..|||+|+.|++|..+|
T Consensus 144 IPNlLTl~RIlLvP~~i~~--~l~-----------------~~-~~~A~~lfiiAglTD~LDGyIARk~n~vS~lGk~LD 203 (341)
T PLN02794 144 LPNLISISRLVSGPVIGWM--IVN-----------------EM-YLSAFVGLAISGASDWLDGYVARKMGINSVVGSYLD 203 (341)
T ss_pred hhHHHHHHHHHHHHHHHHH--HHH-----------------hh-HHHHHHHHHHHHHHHHhhHHHHHHcCCCChhHHHHh
Confidence 4999999999986554332 221 11 345666667889999999999999999999999999
Q ss_pred hccchHHHHHHHHH
Q psy16188 134 HGLDSWTAMFVPAL 147 (395)
Q Consensus 134 hg~D~~~~~~~~~~ 147 (395)
..+|.+......++
T Consensus 204 PLADKllv~svli~ 217 (341)
T PLN02794 204 PLADKVLIGCVALA 217 (341)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999987544443
No 15
>KOG1617|consensus
Probab=97.47 E-value=0.00022 Score=66.80 Aligned_cols=73 Identities=21% Similarity=0.134 Sum_probs=55.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHH-HHHhhhhhHHHHHhcCCCCcchhhh
Q psy16188 54 APNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFL-AYTLDGIDGKQARRTGNSGPVGELF 132 (395)
Q Consensus 54 aPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~-y~~~D~~DGkqARrtg~sSplG~lf 132 (395)
-||++|+....+.-+ +-+++. .. ++-+++++|. ...-|-+||-.|||.+..|-+|..+
T Consensus 70 iPN~Ltl~Ri~a~Pl---i~~lii----------------~~--~~t~A~~~Fa~Ag~TD~lDGyIARk~~l~S~~Gs~L 128 (243)
T KOG1617|consen 70 IPNMLTLARIAATPL---IGYLII----------------DE--NFTAAFGLFAVAGITDLLDGYIARKMRLGSIAGSVL 128 (243)
T ss_pred cchHHHHHHHhhhce---eeEEEe----------------cc--cccHHHHHHHHHHhHHHHHHHHHhhccccchhhhcc
Confidence 499999999887642 111221 12 2366777775 5789999999999999999999999
Q ss_pred hhccchHHHHHHHHH
Q psy16188 133 DHGLDSWTAMFVPAL 147 (395)
Q Consensus 133 Dhg~D~~~~~~~~~~ 147 (395)
|...|.+..+...++
T Consensus 129 DPlADkvlit~~~l~ 143 (243)
T KOG1617|consen 129 DPLADKVLITCLTLC 143 (243)
T ss_pred ChHHHHHHHHHHHHH
Confidence 999997776666555
No 16
>KOG1580|consensus
Probab=47.72 E-value=15 Score=35.44 Aligned_cols=32 Identities=38% Similarity=0.409 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhcCCCCcch
Q psy16188 98 FSLVGICVFLAYTLDGIDGKQARRTGNSGPVG 129 (395)
Q Consensus 98 ~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG 129 (395)
-++...+.|..-+.|..|||-|..|-..-|+-
T Consensus 297 QwlgtvlVF~aL~~D~~~GK~a~~t~akkp~~ 328 (337)
T KOG1580|consen 297 QWLGTVLVFSALTADVVDGKKAPMTAAKKPLA 328 (337)
T ss_pred HHHHHHHHHHHhhhHhhcCCcCccccccCCCc
Confidence 55778889999999999999999988777764
No 17
>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=44.70 E-value=1.8e+02 Score=25.36 Aligned_cols=94 Identities=10% Similarity=0.057 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHcccccc-ccCCCCCCCCCchhHHHHHHH-HHHHHHHhhhhhHHHHHhcC-CCCcchhhhhhc
Q psy16188 59 TFVGFLFTVLSFVWLSFYDYHYYA-SSLTHPNYPPVPKWLFSLVGI-CVFLAYTLDGIDGKQARRTG-NSGPVGELFDHG 135 (395)
Q Consensus 59 Tl~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~w~~~~~~i-~l~~y~~~D~~DGkqARrtg-~sSplG~lfDhg 135 (395)
=+..+.+.+.+..++..-..+-.- ........++.|.+.|++++- ....|..+-....-..+++| ..+|...|+|..
T Consensus 11 R~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~~~~~~~~~~~f~ 90 (149)
T PF04535_consen 11 RLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGKLRSKLLAWFLFI 90 (149)
T ss_pred HHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccchhhhhhh
Confidence 345566666666665422211000 000001234467777766654 44678888888877776665 678899999999
Q ss_pred cchHHHHHHHHHHHHHH
Q psy16188 136 LDSWTAMFVPALLYSIF 152 (395)
Q Consensus 136 ~D~~~~~~~~~~~~~~~ 152 (395)
+|.+...+..-..+++.
T Consensus 91 ~Dqv~~~ll~sa~~Aa~ 107 (149)
T PF04535_consen 91 LDQVLAYLLFSAASAAA 107 (149)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988876666555443
No 18
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=31.36 E-value=4.8e+02 Score=25.81 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=42.3
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHHHHHHHHHHH
Q psy16188 93 VPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLY 149 (395)
Q Consensus 93 ~p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~~~~~~~~~~ 149 (395)
.+.+...++.++....-.+=...=+.+||+|++.=.-.=.||-.|.++.....+.+.
T Consensus 115 ~~~~~~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~ 171 (304)
T COG0053 115 PPLLALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLL 171 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 445555555556655566666677889999998888888999999998877666665
No 19
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=29.05 E-value=5.5e+02 Score=25.01 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=23.4
Q ss_pred HHHHhcCCCCcchhhhhhccchHHHHHHHHH
Q psy16188 117 KQARRTGNSGPVGELFDHGLDSWTAMFVPAL 147 (395)
Q Consensus 117 kqARrtg~sSplG~lfDhg~D~~~~~~~~~~ 147 (395)
+.+|++++..=.++..|+-.|.+......+.
T Consensus 137 ~~~~~~~s~~l~a~~~~~~~D~~~s~~vl~~ 167 (299)
T PRK09509 137 WVVRKTQSQAVRADMLHYQSDVMMNGAILLA 167 (299)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777766789999999999988654433
No 20
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=28.84 E-value=1.9e+02 Score=27.36 Aligned_cols=54 Identities=9% Similarity=-0.042 Sum_probs=30.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhhHHHHHhcCCCCcchhhhhhccchHHHHHHHHH
Q psy16188 94 PKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPAL 147 (395)
Q Consensus 94 p~w~~~~~~i~l~~y~~~D~~DGkqARrtg~sSplG~lfDhg~D~~~~~~~~~~ 147 (395)
+.|....+.+.+.+...+=..=.+.+||+++.+-..+..|+..|.+......+.
T Consensus 93 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vli~ 146 (268)
T TIGR01297 93 GGTMLIVAIVGLIVNLILALYLHRVGHRLGSLALRAAALHVLSDALSSVGVLIG 146 (268)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444443333222222223456777666688999999998887655443
No 21
>PRK15065 PTS system mannose-specific transporter subunit IIC; Provisional
Probab=21.58 E-value=2e+02 Score=28.08 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=47.0
Q ss_pred hhhchhHHHHHhhcccccCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHH-------
Q psy16188 36 YVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLA------- 108 (395)
Q Consensus 36 ~v~~p~w~~~~~~~P~~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y------- 108 (395)
|+=++..+.+++.+|.|+ =|-++.+|-+.-.+.+.++..+.++- ..|.|++.++.+..|
T Consensus 161 ~fG~~~v~~~~~~iP~~v-~~GL~vaggmLPAvGfAmLl~~i~~k-------------~~~~ff~lGFvl~ayl~l~~l~ 226 (262)
T PRK15065 161 AVGTSAVQSMLNAIPEVL-TGGLNIGGGMIVVVGYAMVINMMATR-------------ELMPFFYLGFVLAAFTNLNLIA 226 (262)
T ss_pred HcCHHHHHHHHHHCHHHH-HHHHHHHHhhHHHHHHHHHHHHHhcc-------------chHHHHHHHHHHHHHhCCcHHH
Confidence 334455667788999987 47777777777777777766655431 134455444444222
Q ss_pred ---------HHhhhhhHHHHHhcCC
Q psy16188 109 ---------YTLDGIDGKQARRTGN 124 (395)
Q Consensus 109 ---------~~~D~~DGkqARrtg~ 124 (395)
...+..+.|.||..|.
T Consensus 227 iAiig~~iA~i~~~~~~~~~~~~~~ 251 (262)
T PRK15065 227 LGVIGVVLALIYLQLSPKYGRVAGG 251 (262)
T ss_pred HHHHHHHHHHHHHHhcccccccCCC
Confidence 2346788888887654
No 22
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=20.82 E-value=1.6e+02 Score=28.75 Aligned_cols=60 Identities=10% Similarity=0.132 Sum_probs=40.5
Q ss_pred hhhhchhHHHHHhhcccccCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCCCCCCchhHHHHHHHHHHHH
Q psy16188 35 IYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLA 108 (395)
Q Consensus 35 ~~v~~p~w~~~~~~~P~~vaPN~iTl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~i~l~~y 108 (395)
.|+=++..+.+++.+|.|+. |-+|..|-+.-.+.+.++.-+.++ .-.|.|++.++.+..|
T Consensus 159 ~~~G~~~v~~il~~iP~~v~-~Gl~vaggmLPAvGfAmLl~~m~~-------------k~~~~ff~lGF~laay 218 (265)
T TIGR00822 159 ALVSQSAVQAMLKAIPEVVT-HGLQIAGGIIVVVGYAMVLRMMFK-------------AYLMPFFYLGFLFAAY 218 (265)
T ss_pred HHcCHHHHHHHHHHCHHHHH-HHHHHHHhhHHHHHHHHHHHHHhh-------------cchHHHHHHHHHHHHH
Confidence 34445556777888998875 777888877777777777666542 1256677777766555
Done!