RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy16188
(395 letters)
>gnl|CDD|166000 PLN02359, PLN02359, ethanolaminephosphotransferase.
Length = 389
Score = 155 bits (394), Expect = 1e-43
Identities = 117/409 (28%), Positives = 184/409 (44%), Gaps = 55/409 (13%)
Query: 11 YLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSF 70
Y+ H + YKYS VD + + YV+ PFW++ V +FP W+ PN+IT +GF+F + S
Sbjct: 3 YIGAHGVAALHRYKYSGVDHSYVAKYVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLTS- 61
Query: 71 VWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGE 130
+ Y Y H + PP P+W+ G+ +FL T D +DGKQARRT +S P+GE
Sbjct: 62 ---ALLGYIYSP----HLDTPP-PRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGE 113
Query: 131 LFDHGLDSWTAMFVPALLYS--IFGRSDFSVSPFRMYLICWNVFIS---FYASHWEKYNT 185
LFDHG D+ F S + GR F W IS FY + WE + T
Sbjct: 114 LFDHGCDALACAFETMAFGSTAMCGRDTF-----------WFWVISAVPFYGATWEHFFT 162
Query: 186 GVLYLPWSYDLSMLGTT-------VVFWVTGYYGIEFWKVYLYRDITLGHLL-------- 230
L LP + G T + T G E+W + I +
Sbjct: 163 NTLILP-----VINGPTEGLMLIYCAHFFTAIVGAEWWAQDFGKSIPFLSWVPFVSEIQT 217
Query: 231 -EITFYVSSFISNLPVVIYNIYHSYKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVRTSP 289
I ++ + +P V +N+ + YK + +L A+ LYP V + W SP
Sbjct: 218 YRIVLFLMIAFAVIPTVAFNVSNVYKVVQARKGSMLLALAMLYPFVTLLGGVLIWDYLSP 277
Query: 290 NDIMDLDPRAVFITTGTIFSNICCRLIVAQMSN-------TRCDAFNWLLVAQAVDIVLS 342
+D+M P V + TG F + R+I+A + + C + +L A A + + +
Sbjct: 278 SDLMRNYPHLVVLGTGLAFGFLVGRMILAHLCDEPKGLKTNMCMSLLYLPFAIA-NALTA 336
Query: 343 SFFVGMPRA-ELCLLYVFCTVALLAHIHYGSCVVRQMCKHFKIRVFKIK 390
G+P E +L +C + ++H+ + V+ ++ I F+I
Sbjct: 337 RLNDGVPLVDEFWVLLGYCAFTVSLYLHFATSVIHEITTALGIYCFRIT 385
>gnl|CDD|227383 COG5050, EPT1, sn-1,2-diacylglycerol ethanolamine- and
cholinephosphotranferases [Lipid metabolism].
Length = 384
Score = 128 bits (323), Expect = 2e-33
Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 11 YLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVLSF 70
++ ++ YKY S D + + Y + PFW L+ P W+APNLIT G +F V +
Sbjct: 3 HITSRRISRLKKYKYQSEDRSLLSKYFLKPFWVPLLRVIPYWMAPNLITLCGLIFIVANV 62
Query: 71 VWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGE 130
+ +YD P+W + + +FL T D +DG+QARRTG P+GE
Sbjct: 63 LTTLYYDPCLSV---------DGPRWTYFSYALGLFLYQTFDALDGRQARRTGTGSPLGE 113
Query: 131 LFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFRMYLICWNVFISFYASHWEKYNTGVLYL 190
LFDHG+DS + S FG + F + L + FY S WE+Y+TG LYL
Sbjct: 114 LFDHGVDSINTTLSAIIFVSAFGMGE----SFLLILSQFAPLFVFYLSTWEEYHTGTLYL 169
Query: 191 PWSYDLS--MLGTTVVFWVTGYYGIE-FWKVYL 220
++ F TG YG + FW Y
Sbjct: 170 ARFSGPVEGIVLVCGSFIATGIYGKQLFWHTYA 202
>gnl|CDD|140328 PTZ00307, PTZ00307, ethanolamine phosphotransferase; Provisional.
Length = 417
Score = 122 bits (307), Expect = 5e-31
Identities = 98/414 (23%), Positives = 168/414 (40%), Gaps = 46/414 (11%)
Query: 9 YKYLDKHHLNGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTVL 68
+Y+ +L YKYSS D++ I YV+ +WN +V P +APN ITF GFL +
Sbjct: 17 NEYIPPAYLPNLKKYKYSSTDSSIISRYVLQRYWNFIVNLVPMTVAPNCITFTGFLIGMS 76
Query: 69 SFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPV 128
S L ++ + P W+ +F TLD IDGKQARRTG P+
Sbjct: 77 SAALLLYFYFFEEGV---------YPSWVLYYAAFALFAYQTLDAIDGKQARRTGTGSPL 127
Query: 129 GELFDHGLDSWTAMFVPALLYSIFGRSDFSVSPFRMYLICWNVFISFYASHWEKYNTGVL 188
GELFDHG D++ FV + ++P + + +S + + WE+++TG
Sbjct: 128 GELFDHGCDAFLTPFVLLNVSLA-----TYMTPVERFWLSTISSMSLFTAIWEQFSTGTF 182
Query: 189 YLPWSYDLS--MLGTTVVFWVTGYYGIEFWKVYLYRDITLGHLLEITFYVSS-------- 238
L + + ++ V+F V+G YG W + + ++ +
Sbjct: 183 DLGYVNGPTEGIILNCVLFIVSGVYGESIWDTPAVGPYDVAYPPVLSSFFPGCSGTVHIE 242
Query: 239 ----------FISNLPVVIYNIYHSYKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVRTS 288
+S ++ N+ H + + M P++ AL + V
Sbjct: 243 SVRSVLFLLFLVSCPFTILTNVVHVVLR-PTVHASKVTPMLAALPILTMTAL-HVHVFVV 300
Query: 289 PNDIMDLDPRAVFITTGTIFSNICCRLIVAQMSNTRCDAFNWLLVAQAVDIVLSSFFV-- 346
++ P A+ ++ G + S RL +A++S FNW +V + + +S
Sbjct: 301 FPNLHVKFPFALELSYGLLMSITVTRLTLARLSAMPYRTFNWHIVITFLALTAASLMHYA 360
Query: 347 GMPRAELCLL-----YVFCTVALLAHIHYGS---CVVRQMCKHFKIRVFKIKHN 392
G E + + +A+ A YG Q+ ++ I + IK
Sbjct: 361 GDASVEHKYVEPSLGWALTGLAVFAAWQYGHMILSAFTQIARYLSISIMSIKPR 414
>gnl|CDD|166679 PLN03039, PLN03039, ethanolaminephosphotransferase; Provisional.
Length = 337
Score = 105 bits (262), Expect = 2e-25
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 40/324 (12%)
Query: 92 PVPKWLFSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLY-- 149
P P+W+ G+ +FL T D +DGKQARRT +S P+GELFDHG D+ F A+ +
Sbjct: 23 PPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAF-EAMAFGS 81
Query: 150 -SIFGRSDFSVSPFRMYLICWNVFIS---FYASHWEKYNTGVLYLPWSYDLSMLGTTVVF 205
++ GR F W IS F+ + WE Y T L LP + G ++F
Sbjct: 82 TAMCGRDTF-----------WFWVISAIPFFGATWEHYFTNTLILP-VINGPTEGLALIF 129
Query: 206 ---WVTGYYGIEFWKVYLYRDITLG---------HLLEITFYVSSFISNLPVVIYNIYHS 253
+ T G E+W + I L + ++ + +P + +N +
Sbjct: 130 CGHFFTAIVGAEWWAQPFGKSIPLFSWVPFLNEIQMSRAILFMMIAFAVIPTLAFNTSNV 189
Query: 254 YKTGTGKNRPLLEAMRPLYPLVAFVALSYYWVRTSPNDIMDLDPRAVFITTGTIFSNICC 313
YK +N +L A+ LYP V +A W SP D++ P V + TG F +
Sbjct: 190 YKVVHSRNGSMLLALAMLYPFVTLIAGVLIWDYLSPIDLIANYPHLVVLGTGLAFGFLVG 249
Query: 314 RLIVAQMSN-------TRCDAFNWLLVAQAVDIVLSSFFVGMPRA-ELCLLYVFCTVALL 365
R+I+A + + C + +L A A + + + G+P E +L +C L
Sbjct: 250 RMILAHLCDEPKGLKTNMCMSLLYLPFALA-NALTARLNAGVPLVDEFWVLLGYCIFTLS 308
Query: 366 AHIHYGSCVVRQMCKHFKIRVFKI 389
+ H+ + V+ ++ + I F+I
Sbjct: 309 LYAHFATSVIHEITEALGIYCFRI 332
>gnl|CDD|216278 pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase.
All of these members have the ability to catalyze the
displacement of CMP from a CDP-alcohol by a second
alcohol with formation of a phosphodiester bond and
concomitant breaking of a phosphoride anhydride bond.
Length = 97
Score = 66.1 bits (162), Expect = 1e-13
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 19/104 (18%)
Query: 51 RWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYT 110
+ PNLIT + + +L+ + L Y A + + LA
Sbjct: 1 LGITPNLITLLRLILGLLAALLLLLGQYLLLA-------------------ALLLLLAVL 41
Query: 111 LDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALLYSIFGR 154
LDG+DGK ARRTG S P+G L D D + + + L I
Sbjct: 42 LDGLDGKLARRTGQSSPLGALLDSVADRLSDVALLLGLLLIRLA 85
>gnl|CDD|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase.
Length = 620
Score = 40.6 bits (95), Expect = 0.001
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 9 YKYLDKHHL-NGFDNYKYSSVDTNPIGIYVMHPFWNKLVEYFPRWLAPNLITFVGFLFTV 67
++ L H+L + + ++ +SS+ T PI V+HPF + YF + P L T ++
Sbjct: 146 HRALHHHYLYSRYHSHHHSSIVTEPI-TSVIHPFAEHIA-YFLLFAIPLLTTIFTGTASI 203
Query: 68 LSFV-WLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYT 110
+F ++S+ D+ +++ H N+ +PKWLFS+ +L YT
Sbjct: 204 AAFFGYISYIDF---MNNMGHCNFELIPKWLFSIFPPLKYLMYT 244
>gnl|CDD|223632 COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid
metabolism].
Length = 192
Score = 38.9 bits (91), Expect = 0.002
Identities = 34/188 (18%), Positives = 46/188 (24%), Gaps = 35/188 (18%)
Query: 51 RWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYT 110
PN +T + L F L L L + LA
Sbjct: 11 LGNTPNQLTLLRIFLIPL-FALLLLLPGL----------------GLLLLALVLFLLAAL 53
Query: 111 LDGIDGKQARRTGNSGPVGELFDHGLDS------------WTAMFVPALLYSIFGRSDFS 158
D +DG AR+ G G D D + L I R +
Sbjct: 54 TDALDGYLARKWGQVSRFGAFLDPVADKLLDAALLLGLVALGPVSPLWLAILILAR-EIL 112
Query: 159 VSPFRMYLICWNVFISFYASHWEKYNT-----GVLYLPWSYDLSMLGTTVVFWVTGYYGI 213
VS R AS K T +L L L+ L + + +
Sbjct: 113 VSYLRALAASLGGRDYVGASGRGKRKTILQMVALLLLLLGLLLTPLWLLLGLVLLAAAVL 172
Query: 214 EFWKVYLY 221
Y
Sbjct: 173 TLITGIQY 180
>gnl|CDD|224104 COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].
Length = 234
Score = 36.1 bits (84), Expect = 0.019
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 20/98 (20%)
Query: 51 RWLAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPKWLFSLVGICVFLAYT 110
+L PNLIT +G +LS V + + + LA
Sbjct: 8 LYLLPNLITALGLFLGLLSIVAALEGRFEAAL--------------------LLILLALI 47
Query: 111 LDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALL 148
LDG+DG+ AR+ G D D + PALL
Sbjct: 48 LDGLDGRVARKLNAKSAFGAELDSLADLVSFGVAPALL 85
>gnl|CDD|232991 TIGR00473, pssA, CDP-diacylglycerol--serine
O-phosphatidyltransferase. This enzyme,
CDP-diacylglycerol--serine O-phosphatidyltransferase, is
involved in phospholipid biosynthesis catalyzing the
reaction CDP-diacylglycerol + L-serine = CMP +
L-1-phosphatidylserine. Members of this family do not
bear any significant sequence similarity to the
corresponding E.coli protein [Fatty acid and
phospholipid metabolism, Biosynthesis].
Length = 151
Score = 31.6 bits (72), Expect = 0.31
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 105 VFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPA-LLYSI--FGRSDFSVSP 161
+ L+ D +DG+ AR+T G+ D D + PA L YSI F V+
Sbjct: 27 ILLSMFFDFLDGRVARKTNRVSDFGKELDSLADVVSFGVAPAALAYSIGNFQTIGILVAA 86
Query: 162 FRMYLIC 168
++ +C
Sbjct: 87 --LFFLC 91
>gnl|CDD|115879 pfam07252, DUF1433, Protein of unknown function (DUF1433). This
family contains a number of hypothetical bacterial
proteins of unknown function approximately 100 residues
in length.
Length = 88
Score = 29.6 bits (67), Expect = 0.73
Identities = 7/28 (25%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 10 KYLDKHHLNGFDNYKYSSVDTNPIGIYV 37
YL K+++ + + +++ + +P+GIY
Sbjct: 11 LYL-KYNIKNYKSVTFTNFEKSPMGIYS 37
>gnl|CDD|176558 cd08621, PI-PLCXDc_like_2, Catalytic domain of uncharacterized
hypothetical proteins similar to eukaryotic
phosphatidylinositol-specific phospholipase C, X domain
containing proteins. This subfamily corresponds to the
catalytic domain present in a group of uncharacterized
hypothetical proteins found in bacteria and fungi, which
are similar to eukaryotic phosphatidylinositol-specific
phospholipase C, X domain containing proteins
(PI-PLCXD). The typical eukaryotic
phosphoinositide-specific phospholipase C (PI-PLC, EC
3.1.4.11) has a multidomain organization that consists
of a PLC catalytic core domain, and various regulatory
domains. The catalytic core domain is assembled from two
highly conserved X- and Y-regions split by a divergent
linker sequence. In contrast, eukaryotic PI-PLCXDs
contain a single TIM-barrel type catalytic domain, X
domain, and are more closely related to bacterial
PI-PLCs, which participate in Ca2+-independent PI
metabolism, hydrolyzing the membrane lipid
phosphatidylinositol (PI) to produce phosphorylated
myo-inositol and diacylglycerol (DAG). Although the
biological function of eukaryotic PI-PLCXDs still
remains unclear, it may distinct from that of typical
eukaryotic PI-PLCs.
Length = 300
Score = 30.4 bits (69), Expect = 1.4
Identities = 28/118 (23%), Positives = 40/118 (33%), Gaps = 15/118 (12%)
Query: 206 WVTGYYGIEFWKVYLYRDITLGHLLEITFYVSSFISNLP--VVIYNIYHSYKTGTGKNRP 263
TG+Y E L +I V+ F P +VI N H T G RP
Sbjct: 69 LWTGHYNGEDASAQ---GANGESLDDILDEVNRFTDENPGELVILNFSHILNTDNGDGRP 125
Query: 264 --------LLEAMRPLYPLVAFVALSYYWVRTSPNDIMDLDPRA--VFITTGTIFSNI 311
+ + + + + +D +D +A VFI GTI SN
Sbjct: 126 FSAEEWEKIFDELEGINNRCGNIDEEGDLYTQKLSDFIDASGKACVVFIYDGTISSNQ 183
>gnl|CDD|211940 TIGR04217, archae_ser_T, archaetidylserine synthase. The activity
CDP-2,3-di-O-geranylgeranyl-sn-glycerol:L-serine
O-archaetidyltransferase (archaetidylserine synthase)
was demonstrated experimentally in Methanothermobacter
thermautotrophicus. Members represent an exception
within the broader family (TIGR00473) of
CDP-diacylglycerol-serine O-phosphatidyltransferases.
Length = 221
Score = 29.7 bits (67), Expect = 2.2
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 98 FSLVGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSWTAMFVPALL-YSIFG 153
F L + + LA DG DG ARR SG +GE D D+ + PA+L + I+G
Sbjct: 33 FGLAFVLILLAAVADGADGYIARRIK-SGELGEQLDSLADAVSFGVAPAVLIFLIYG 88
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and
metabolism].
Length = 917
Score = 28.1 bits (63), Expect = 9.6
Identities = 24/201 (11%), Positives = 48/201 (23%), Gaps = 43/201 (21%)
Query: 53 LAPNLITFVGFLFTVLSFVWLSFYDYHYYASSLTHPNYPPVPK------------WLFSL 100
L P + ++ L L + L D + P P + L
Sbjct: 732 LTPLQLLWINLLTDSLPALALGVEDPESD--VMKRPPRGPEEGLFNRKIFWRFILIIGLL 789
Query: 101 VGICVFLAYTLDGIDGKQARRTGNSGPVGELFDHGLDSW-TAMFVPALLYSIFGRSDFSV 159
I L + L + D T F +L +
Sbjct: 790 SAILFILTFLLYLL---------GFIANTLGLDLFQALLQTTAFTVLVLIQLL------- 833
Query: 160 SPFRMYLICWNVFISFYASHWEKYNTGVLYLPWSYDLSMLGTTVVFWVTGYYGIEFWKVY 219
+ L + F +S L++L ++ + + K++
Sbjct: 834 ----LTLAVRSRGRPFLSSLLFSN--------KYLWLALLVIIILQLLIIFLPPLNLKIF 881
Query: 220 LYRDITLGHLLEITFYVSSFI 240
++L L +
Sbjct: 882 QPTPLSLFEWLIAIAVALLLL 902
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.330 0.143 0.482
Gapped
Lambda K H
0.267 0.0656 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,204,070
Number of extensions: 2110180
Number of successful extensions: 2731
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2703
Number of HSP's successfully gapped: 86
Length of query: 395
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 296
Effective length of database: 6,546,556
Effective search space: 1937780576
Effective search space used: 1937780576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.0 bits)