BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16199
(842 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|380027208|ref|XP_003697321.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Apis
florea]
Length = 1024
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/392 (70%), Positives = 323/392 (82%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D VNFE++LVKDLGVKIE ++LS ++TIE L+ GY AIF+GIG P
Sbjct: 225 SSEIPQYRLPYDIVNFEIDLVKDLGVKIELGKALSKDNLTIEGLQNSGYKAIFLGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A IPIF LTEEMGF+TSK+FLP+VA SK G+C CK+ LP L G V+VLGAGDTAF
Sbjct: 285 AKAIPIFSNLTEEMGFFTSKSFLPKVAKGSKPGMCA-CKRNELPSLHGKVVVLGAGDTAF 343
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRC A KV VVFRKG TNIRAVPEE LA EEKCEF+PF SP QV V++ KI
Sbjct: 344 DCATSALRCEAKKVYVVFRKGFTNIRAVPEEFDLAREEKCEFIPFQSPKQVIVRNGKIIA 403
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTE+NE GEW+ED+EQ +LK +++ISAFGS L D DV++A+ P+K++K+ PEV+
Sbjct: 404 IEFYRTEENENGEWIEDKEQICRLKTDFVISAFGSGLQDQDVIQAMVPIKMNKWNLPEVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM+TSVPGVFCGGD A ++ TTVESVNDGKTAAW+IHK+IQ NL VP P LPKF
Sbjct: 464 SQTMSTSVPGVFCGGDLAGIAHTTVESVNDGKTAAWYIHKFIQNSYNLEVPKIPQLPKFH 523
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVEICGLKF NPFGLASAPPTT+S+M+RRAFE GWGF VTKTFSL KD+VTN
Sbjct: 524 TPIDDVDLSVEICGLKFENPFGLASAPPTTSSTMIRRAFEAGWGFVVTKTFSLDKDLVTN 583
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRI+KGTTSRH YGPEQGSFLNIELISEK+
Sbjct: 584 VSPRIIKGTTSRHHYGPEQGSFLNIELISEKS 615
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/258 (72%), Positives = 213/258 (82%), Gaps = 2/258 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+YN+ DW ELS+K E+AGADALELNLSCPHGMGE GMGLACGQDP +VRNIS
Sbjct: 634 ILIASIMCSYNRADWTELSQKAERAGADALELNLSCPHGMGESGMGLACGQDPVLVRNIS 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
W+R +VKIPFFVKLTPNIT+I IAKAAYEG A+GVSAINTV LM L AD PWPAVG
Sbjct: 694 RWIREAVKIPFFVKLTPNITDIVSIAKAAYEGHANGVSAINTVQSLMGLHADATPWPAVG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK TTYGG+SGNATRP L+AVS+I+K P FPILGIGGI+SADVALQF+ GA +Q+
Sbjct: 754 IKKATTYGGMSGNATRPQALRAVSAISKALPGFPILGIGGIESADVALQFLHCGASVLQV 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFT++DDYITGL+ LLYLK+ Q+K WDGQSPPT HQKGKP + GK
Sbjct: 814 CSAVQNQDFTLIDDYITGLKALLYLKNLKQVKNWDGQSPPTFKHQKGKPVV-LQHALGKN 872
Query: 804 IPNFGEYKKIRENLITEL 821
IP FGEY+K+RE I E+
Sbjct: 873 IPYFGEYQKLREEKIAEI 890
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 89/132 (67%), Gaps = 14/132 (10%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPK-----RQINTPVETILSVKD 493
L + IP FGEY+K+RE I E+ ++ N L K R P+ I S+KD
Sbjct: 869 LGKNIPYFGEYQKLREEKIAEIK---------AISNPLDKLVKITRPSPEPIAAIPSIKD 919
Query: 494 VIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT 553
VIG+A+ + Y +L+NK+QV+ALI+DDMCINCGKCY+AC DSGYQAI F ETH VT
Sbjct: 920 VIGKALNYIGTYKDLNNKEQVIALIDDDMCINCGKCYIACADSGYQAIKFDSETHIPTVT 979
Query: 554 DECTGCTLCLSI 565
D+CTGCTLCLS+
Sbjct: 980 DDCTGCTLCLSV 991
>gi|110760297|ref|XP_393690.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1
[Apis mellifera]
Length = 1024
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/392 (69%), Positives = 325/392 (82%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D VNFE++LVKDLGVKIE ++LS ++TIE L+ GY AIF+GIG P+
Sbjct: 225 SSEIPQYRLPYDIVNFEIDLVKDLGVKIELGKALSKDNLTIESLQNSGYKAIFLGIGLPD 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A IPIF LTEEMGF+TSK+FLP+VA SK G+C CK+ LP L G V+VLGAGDTAF
Sbjct: 285 AKAIPIFSNLTEEMGFFTSKSFLPKVAKGSKPGMCA-CKRNELPSLHGKVVVLGAGDTAF 343
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA K+ VVFRKG TNIRAVPEE LA EEKCEF+PF SP QV V++ KI
Sbjct: 344 DCATSALRCGAKKIYVVFRKGFTNIRAVPEEFDLAKEEKCEFIPFQSPKQVIVRNGKIIA 403
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTE+NE EW+ED+EQ +LKA+++ISAFGS L + DV++A+ P+K++K+ PEV+
Sbjct: 404 IEFYRTEENENDEWIEDKEQICRLKADFVISAFGSGLQNQDVIQAMVPIKMNKWNLPEVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM+TS+PGVFCGGD A ++ TTVESVNDGKTAAW+IHK+IQ NL VP P LPKF
Sbjct: 464 SQTMSTSIPGVFCGGDLAGIAHTTVESVNDGKTAAWYIHKFIQNSYNLEVPKIPQLPKFH 523
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+S+EICGLKF NPFGLASAPPTT+S+M+RRAFE GWGF VTKTFSL KD+VTN
Sbjct: 524 TPIDDVDLSIEICGLKFENPFGLASAPPTTSSTMIRRAFEAGWGFVVTKTFSLDKDLVTN 583
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRI+KGTTSRH YGPEQGSFLNIELISEK+
Sbjct: 584 VSPRIIKGTTSRHHYGPEQGSFLNIELISEKS 615
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/258 (72%), Positives = 213/258 (82%), Gaps = 2/258 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+YN+ DW ELS+K E+AGADALELNLSCPHGMGE GMGLACGQDP +VRNIS
Sbjct: 634 ILIASIMCSYNRADWTELSQKAERAGADALELNLSCPHGMGESGMGLACGQDPVLVRNIS 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
W+R +VKIPFFVKLTPNIT+I IAKAAYEG A+GVSAINTV LM L AD PWPAVG
Sbjct: 694 RWIREAVKIPFFVKLTPNITDIVSIAKAAYEGHANGVSAINTVQSLMGLHADATPWPAVG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK TTYGG+SGNATRP L+AVS+I+K P FPILGIGGI+SADVALQF+ GA +Q+
Sbjct: 754 IKKATTYGGMSGNATRPQALRAVSAISKALPGFPILGIGGIESADVALQFLHCGASVLQV 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFT++DDYITGL+ LLYLK+ QLK WDGQSPPT HQKGKP + GK
Sbjct: 814 CSAVQNQDFTLIDDYITGLKALLYLKNLKQLKNWDGQSPPTFKHQKGKPVV-LQHALGKN 872
Query: 804 IPNFGEYKKIRENLITEL 821
IP FGEY+K+RE I E+
Sbjct: 873 IPYFGEYQKLREAKIAEI 890
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 85/127 (66%), Gaps = 4/127 (3%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
L + IP FGEY+K+RE I E+ D + R + I S+KDVIG+A
Sbjct: 869 LGKNIPYFGEYQKLREAKIAEIKAISNPLDNLVETT----RSSPETITAIPSIKDVIGKA 924
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ + Y +L+NK+QV+ALI+DDMCINCGKCY+AC DSGYQAI F ETH VTD+CTG
Sbjct: 925 LNYIGTYKDLNNKEQVIALIDDDMCINCGKCYIACADSGYQAIKFDSETHIPTVTDDCTG 984
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 985 CTLCLSV 991
>gi|405954438|gb|EKC21880.1| Dihydropyrimidine dehydrogenase [NADP+] [Crassostrea gigas]
Length = 903
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/393 (69%), Positives = 328/393 (83%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+ V+FEVEL KD+GVKIE R+LST DIT++KL+K+GY A+F+GIG PN
Sbjct: 251 SSEIPQYRLPYSVVDFEVELAKDIGVKIEKGRALSTSDITVQKLKKEGYEAVFLGIGMPN 310
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IPIF LTE MGFYTSK FLP+V+ +SK G+C CK + LP L G VIVLGAGDTAF
Sbjct: 311 PKKIPIFADLTEPMGFYTSKDFLPKVSAASKAGMCS-CKSK-LPQLSGKVIVLGAGDTAF 368
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE++LA EEKCEFLPF++P +V K+ I G
Sbjct: 369 DCATSALRCGAKRVYVVFRKGFTNIRAVPEEMELAKEEKCEFLPFLAPRKVMTKNGVIMG 428
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ++ G WVEDEE+ I++KANYIISAFGS L D+DV++A+ PVK++++G PEV+
Sbjct: 429 MEFVRTEQDDDGNWVEDEEEIIRIKANYIISAFGSGLTDSDVVDAMSPVKMNRWGAPEVD 488
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VFCGGD A ++ TTVESVNDGK A+WHIHKY+Q + + +P KP LPKF
Sbjct: 489 EQTMQTSEPWVFCGGDLAGVAQTTVESVNDGKQASWHIHKYLQALHGIPIPSKPSLPKFF 548
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVE+CGLKFPNP+GLASA PTT+S+M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 549 TPIDEVDVSVEMCGLKFPNPYGLASATPTTSSTMIRRAFEAGWGFALTKTFSLDKDIVTN 608
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS H+YGP QGS+LNIELISEKTA
Sbjct: 609 VSPRIVRGTTSGHIYGPGQGSYLNIELISEKTA 641
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 162/239 (67%), Positives = 191/239 (79%), Gaps = 1/239 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+I SIMC+YNK+DW EL+K E AG+DALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 659 IVIGSIMCSYNKEDWTELAKMAEAAGSDALELNLSCPHGMGERGMGLACGQDPELVRNIC 718
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIPFF KLTPN+T+I IAKAAYEG ADGV+A NTVSGLM L +G WP VG
Sbjct: 719 RWVRDAVKIPFFAKLTPNVTSIVSIAKAAYEGNADGVTATNTVSGLMGLKNNGMAWPNVG 778
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSGNA RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+Q GA +Q+
Sbjct: 779 KDHRTTYGGVSGNAIRPIALRAVTAIARELPGFPILATGGIDSAEAGLQFLQGGATVLQV 838
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
CSAV NQ++TV+DDYITGL+TLLYL+S +L WDGQSPPT HQ GKP + +D G+
Sbjct: 839 CSAVHNQEYTVIDDYITGLKTLLYLRSVEELHNWDGQSPPTAPHQLGKPVLKVKDIIGE 897
>gi|383863176|ref|XP_003707058.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Megachile rotundata]
Length = 1027
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/392 (68%), Positives = 322/392 (82%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D VNFEVEL+KDLGVKIE R+LS D+TI+ L++ GY AIF+GIG P
Sbjct: 224 SSEIPQYRLPYDVVNFEVELMKDLGVKIETGRALSKNDLTIQGLQESGYKAIFLGIGLPE 283
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A IPIF LTEEMGF+TSK+FLP+V +SK G+C CK LP L+G V+VLGAGDTAF
Sbjct: 284 AKTIPIFSDLTEEMGFFTSKSFLPKVTKASKPGMCA-CKSNELPSLEGNVVVLGAGDTAF 342
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV +VFRKG TNIRAVPEE LA EEKCEF+PF SP QV ++ KI
Sbjct: 343 DCATSALRCGAKKVYIVFRKGFTNIRAVPEEFDLAREEKCEFIPFQSPKQVITRNGKIVA 402
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTE+NE G+W+ED EQ KLK +++ISAFGS L D V+EA+ PVKL+++ PEV+
Sbjct: 403 IEFYRTEKNENGDWIEDSEQVCKLKTDFVISAFGSGLQDLSVMEAMTPVKLNRWNLPEVD 462
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
+ T++T+VPGVFCGGD A +++TTVE+VNDGKTAAW+IHK+IQ NL +P+ P LPKF
Sbjct: 463 FETLSTTVPGVFCGGDLAGVANTTVEAVNDGKTAAWYIHKFIQNSYNLQMPEVPQLPKFH 522
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVE+C LKF NPFGLASAPP T S+M+RRAFE GWGFAVTKTFSL KD+VTN
Sbjct: 523 TPIDDVDLSVEVCNLKFENPFGLASAPPCTTSAMIRRAFEAGWGFAVTKTFSLDKDLVTN 582
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRI+KGTTSRH YGPEQ SFLNIELISEKT
Sbjct: 583 VSPRIIKGTTSRHHYGPEQSSFLNIELISEKT 614
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/268 (72%), Positives = 220/268 (82%), Gaps = 2/268 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMCTYNK DW EL++K E AGADALELNLSCPHGMGE GMGLACGQDPE+VRNIS
Sbjct: 633 IVIASIMCTYNKADWTELAQKAEAAGADALELNLSCPHGMGESGMGLACGQDPEIVRNIS 692
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
W+R++VKIPFFVKLTPNIT+I IAKAAYEG ADGVSAINTV GLM L AD PWPAVG
Sbjct: 693 RWIRAAVKIPFFVKLTPNITDIVSIAKAAYEGHADGVSAINTVQGLMGLHADATPWPAVG 752
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK TTYGG+SGNATRP L+A+SSI+K P FPILGIGG+DSADVALQF+ +GA VQ+
Sbjct: 753 FKKATTYGGMSGNATRPQALRAISSISKALPGFPILGIGGVDSADVALQFLHSGASVVQV 812
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFT++DDY+TGL+TLLYLKS L+ WDGQSPPT HQKGKP F+ GK
Sbjct: 813 CSAIQNQDFTLIDDYVTGLKTLLYLKSLKHLEHWDGQSPPTFKHQKGKPV-TFQHALGKN 871
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGV 831
IP FGEY+K+RE I E+ K D V
Sbjct: 872 IPYFGEYQKLREQKIAEIKAKSNPLDNV 899
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 4/127 (3%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
L + IP FGEY+K+RE I E+ K D V +Q P + + P+ TI KDVIG+A
Sbjct: 868 LGKNIPYFGEYQKLREQKIAEIKAKSNPLDNV-VQIIRPAPKPDAPIPTI---KDVIGKA 923
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ + Y L+NK+QVVALI+DDMCINCGKCYM C DSGYQAI F ETH VTD+CTG
Sbjct: 924 LTYIGAYKNLNNKEQVVALIDDDMCINCGKCYMTCADSGYQAIKFDSETHIPTVTDDCTG 983
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 984 CTLCLSV 990
>gi|332028865|gb|EGI68891.1| Dihydropyrimidine dehydrogenase [Acromyrmex echinatior]
Length = 1019
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/402 (68%), Positives = 324/402 (80%), Gaps = 1/402 (0%)
Query: 32 ERPVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTA 91
E+ V L SSEIPQYRLP+D ++FEV+LV+DLG+KIE RSLS D+TI+ L+ GY A
Sbjct: 213 EKYVGGL-SSSEIPQYRLPYDVISFEVDLVRDLGIKIELGRSLSENDLTIQSLQNAGYKA 271
Query: 92 IFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVI 151
IF+GIG P I IF+ LT EMGF+TSK FLP VA SK G+C + LP L G VI
Sbjct: 272 IFLGIGLPEPKSISIFENLTPEMGFFTSKNFLPIVAKGSKPGMCACKNNQELPSLWGNVI 331
Query: 152 VLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV 211
VLGAGDTAFDCATSALRCGA KV VVFRKG TN+RAVPEE+ LA EEKCEF+PF SP QV
Sbjct: 332 VLGAGDTAFDCATSALRCGARKVFVVFRKGFTNVRAVPEEMDLAKEEKCEFIPFQSPKQV 391
Query: 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271
+ + +I ++F RTEQNE GEW+EDEEQ+I LKA+++ISAFGS L D V A+ PVK+
Sbjct: 392 ILHNERIVAIEFCRTEQNENGEWIEDEEQKIVLKADFVISAFGSGLYDFSVKRAMIPVKM 451
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVP 331
+K+ P+V+ TTM TSVPGVFCGGD A ++ TTVESVNDGKTAAW+IHKYIQE +LTVP
Sbjct: 452 NKWNLPDVDNTTMMTSVPGVFCGGDLAGVAQTTVESVNDGKTAAWYIHKYIQEFYDLTVP 511
Query: 332 DKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTF 391
+ P LPKF + +D VD+SVEICG+KF NPFGLASAPP T+S+M+RRAFE GW FA+TKTF
Sbjct: 512 ETPQLPKFHTAVDNVDLSVEICGIKFENPFGLASAPPCTSSAMIRRAFEAGWAFAITKTF 571
Query: 392 SLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SL KD+VTNVSPRIVKGTTSRH YGPEQGSFLNIELISEKTA
Sbjct: 572 SLDKDLVTNVSPRIVKGTTSRHHYGPEQGSFLNIELISEKTA 613
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/266 (69%), Positives = 214/266 (80%), Gaps = 5/266 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMCTYN+ DW +L+KK E AG+D LELNLSCPHGMGE GMGLACGQDPE+VRNI
Sbjct: 631 VVIASIMCTYNRADWTKLAKKAETAGSDGLELNLSCPHGMGESGMGLACGQDPELVRNIC 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIPFFVKLTPNIT+I IAKAAYEGKADGV+AINT+SGLM L AD PWPAVG
Sbjct: 691 RWVREAVKIPFFVKLTPNITDILSIAKAAYEGKADGVTAINTISGLMGLHADATPWPAVG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNATRP LKA+S I++ P FPILG GG+DSADVALQF+ GA VQ+
Sbjct: 751 LNKSTTYGGVSGNATRPQALKAISIISRHLPGFPILGTGGVDSADVALQFLHCGASVVQV 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFT++DDY+TGL+ LLYLKS Q K WDGQSPPT HQKGKP + GK
Sbjct: 811 CSAIQNQDFTLIDDYVTGLKALLYLKSLVQTKDWDGQSPPTFKHQKGKP-ISLQHALGKN 869
Query: 804 IPNFGEYKKIRENLITELNLKKLNSD 829
+P FGEY+++RE I EL K NS+
Sbjct: 870 VPYFGEYQRLREQKIAEL---KANSN 892
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 96/129 (74%), Gaps = 8/129 (6%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPK--RQINTPVETILSVKDVIG 496
L + +P FGEY+++RE I EL K NS+ + N + K R P+ +I +VKD+IG
Sbjct: 866 LGKNVPYFGEYQRLREQKIAEL---KANSNPL---NEIVKAMRPAPGPIASIPTVKDIIG 919
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDEC 556
+A+ + +Y ELDN+KQVVALI+DDMCINCGKCYMAC DSGYQAITF P+TH VT++C
Sbjct: 920 KALIHIGSYNELDNRKQVVALIDDDMCINCGKCYMACADSGYQAITFDPDTHIPTVTNDC 979
Query: 557 TGCTLCLSI 565
TGCTLCLS+
Sbjct: 980 TGCTLCLSV 988
>gi|307201146|gb|EFN81057.1| Dihydropyrimidine dehydrogenase [NADP+] [Harpegnathos saltator]
Length = 962
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 277/402 (68%), Positives = 321/402 (79%), Gaps = 1/402 (0%)
Query: 32 ERPVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTA 91
E+ + AL SSEIPQYRLP+D VNFEV+LV+DLGVKIE RSL D+TI+ L+ GY A
Sbjct: 180 EKYIGAL-SSSEIPQYRLPYDVVNFEVDLVRDLGVKIELGRSLCEDDLTIQGLQNVGYKA 238
Query: 92 IFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVI 151
IF+GIG P IPIF+ LT EMGFYTSK+FLP VA SSK G+C + LP L+G VI
Sbjct: 239 IFLGIGLPEPKSIPIFENLTPEMGFYTSKSFLPAVAKSSKLGMCACKSYQELPSLRGNVI 298
Query: 152 VLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV 211
VLGAGDTAFDCATSALRCGA KV VVFRKG TNIRAVPEEV LA EEKCEF+ F SP +V
Sbjct: 299 VLGAGDTAFDCATSALRCGAKKVFVVFRKGFTNIRAVPEEVDLAKEEKCEFISFQSPKRV 358
Query: 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271
+++ KI G++F RTEQNE GEW+EDEEQ KLKA+++ISAFGS L ++ V A+ PVK+
Sbjct: 359 ILRNKKITGIEFCRTEQNENGEWIEDEEQMFKLKADFVISAFGSGLYNSSVKRAMAPVKI 418
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVP 331
+K+ PEVN TM TSV GVFCGGD A +S TTVESVNDGKTAAW+IHKYIQE + VP
Sbjct: 419 NKWNLPEVNEATMTTSVSGVFCGGDLAGVSQTTVESVNDGKTAAWYIHKYIQESHGSVVP 478
Query: 332 DKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTF 391
+ P LPKF + ID VD+SVE+CG++F NPFGLASAPP T+S+M+RRAFE GW FAVTKTF
Sbjct: 479 EIPQLPKFHTAIDEVDLSVEMCGMRFENPFGLASAPPCTSSAMIRRAFEAGWAFAVTKTF 538
Query: 392 SLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SL KD+VTNVSPRIVKGTT H YGP Q SFLNIELISEKTA
Sbjct: 539 SLDKDLVTNVSPRIVKGTTPGHYYGPGQSSFLNIELISEKTA 580
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/268 (70%), Positives = 215/268 (80%), Gaps = 3/268 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMCTYNK DW EL++K E AG+DALELNLSCPHGMGE GMGLACGQD E+VRNIS
Sbjct: 598 IVIASIMCTYNKADWTELARKAEVAGSDALELNLSCPHGMGESGMGLACGQDSELVRNIS 657
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFFVKLTPNIT+I IAKAAYEGKADGVSAINTV GLM L + G PWPAV
Sbjct: 658 RWVREAIKIPFFVKLTPNITDIVSIAKAAYEGKADGVSAINTVQGLMGLRSTGIPWPAVD 717
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ K TTYGGVSGNATRP L+AVS+I+K P F ILGIGGIDSADVALQF+ GA +QI
Sbjct: 718 S-KFTTYGGVSGNATRPQALRAVSTISKQLPGFSILGIGGIDSADVALQFLHCGASVIQI 776
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
SA+QNQDFT++DDY+TGL+TLLYLKS +K WDGQSPPT HQKGKP + GK
Sbjct: 777 GSAIQNQDFTLIDDYVTGLKTLLYLKSLAHIKDWDGQSPPTFKHQKGKPV-SLQHALGKN 835
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGV 831
+P FGEY+K+RE I EL + DGV
Sbjct: 836 VPYFGEYQKLREKKIAELKVNSNLLDGV 863
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 98/129 (75%), Gaps = 8/129 (6%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPK--RQINTPVETILSVKDVIG 496
L + +P FGEY+K+RE I EL K+NS+ L +G+ + R + P+ +I SVKDVIG
Sbjct: 832 LGKNVPYFGEYQKLREKKIAEL---KVNSN---LLDGVLEVTRPASAPIASIPSVKDVIG 885
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDEC 556
+ + +++Y ELDNKKQVVALI+DDMCINCGKCYMAC DSGYQAITF +TH VTD+C
Sbjct: 886 KTLDNISSYKELDNKKQVVALIDDDMCINCGKCYMACADSGYQAITFDSDTHIPKVTDDC 945
Query: 557 TGCTLCLSI 565
TGCTLCLS+
Sbjct: 946 TGCTLCLSV 954
>gi|340720144|ref|XP_003398503.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1
[Bombus terrestris]
Length = 1024
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/392 (68%), Positives = 316/392 (80%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D VNFE++L+KDLGVKIE ++LS D+TI+ L+ GY AIF+GIG P
Sbjct: 225 SSEIPQYRLPYDVVNFEIDLIKDLGVKIELGKALSENDLTIQGLQSSGYKAIFLGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A IPIF LTEEMGF+TSK+FLP+VA SK G+C CK LP L+G V+VLGAGDTAF
Sbjct: 285 AKTIPIFSNLTEEMGFFTSKSFLPKVAKGSKPGMCA-CKSNGLPSLRGNVVVLGAGDTAF 343
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFRKG TNIRAVPEE LA EEKCEF+PF SP +V ++ KI
Sbjct: 344 DCATSALRCGAKKVFVVFRKGFTNIRAVPEEFDLAREEKCEFVPFQSPKRVITRNGKIVA 403
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ+E EW+EDEEQ +LKAN+IISAFGS L D+ V A+ P+K++K+ PEV+
Sbjct: 404 IEFCRTEQDENDEWIEDEEQICRLKANFIISAFGSGLQDSSVTRAMVPIKMNKWNLPEVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM+TSVPGVFCGGD A ++ TTVESVNDGK AAW+IHKYIQ N V + P LPKF
Sbjct: 464 TETMSTSVPGVFCGGDLAGVAHTTVESVNDGKIAAWYIHKYIQNCYNSEVSEVPQLPKFH 523
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT S+M+RRAFE GW F VTKTFSL KD+VTN
Sbjct: 524 TPIDDVDISVEMCGLKFENPFGLASAPPTTCSTMIRRAFEAGWSFVVTKTFSLDKDLVTN 583
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRI+KGTTSR+ YGPEQ SFLNIELISEK+
Sbjct: 584 VSPRIIKGTTSRYHYGPEQSSFLNIELISEKS 615
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/266 (71%), Positives = 219/266 (82%), Gaps = 5/266 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMCTYN+ DW EL++K E AGADALELNLSCPHGMGE GMGLACGQDPE+VRNIS
Sbjct: 634 IIIASIMCTYNRADWTELAQKAESAGADALELNLSCPHGMGESGMGLACGQDPELVRNIS 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFFVKLTPNIT+I IAKAA+EG ADGVSAINTV LM L AD PWPAVG
Sbjct: 694 RWVREAIKIPFFVKLTPNITDIVSIAKAAHEGHADGVSAINTVKSLMGLHADATPWPAVG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK TTYGG+SGNATRP+ L+AVSSI++ P FPILGIGGIDSADVALQF+ GA +Q+
Sbjct: 754 IKKATTYGGMSGNATRPLALRAVSSISQNLPGFPILGIGGIDSADVALQFLHCGASILQV 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFT++DDY+TGL+ LLYLKS Q+K WDGQSPPT HQKGKP + GK
Sbjct: 814 CSAVQNQDFTLIDDYVTGLKALLYLKSLEQVKDWDGQSPPTFKHQKGKPVV-LQHALGKN 872
Query: 804 IPNFGEYKKIRENLITELNLKKLNSD 829
IP FGEY+++RE I E+ KLNS+
Sbjct: 873 IPYFGEYQRLREQKIAEI---KLNSN 895
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 92/131 (70%), Gaps = 12/131 (9%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSD----GVSLQNGLPKRQINTPVETILSVKDV 494
L + IP FGEY+++RE I E+ KLNS+ V + PK P+ + ++K+V
Sbjct: 869 LGKNIPYFGEYQRLREQKIAEI---KLNSNPLDKSVEITRPAPK-----PIAPVPTIKNV 920
Query: 495 IGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTD 554
IG+A+ + Y +L+NK+QVVALI+DDMCINCGKCYMAC DSGYQAI F +TH VTD
Sbjct: 921 IGKALSHIGTYKDLNNKEQVVALIDDDMCINCGKCYMACADSGYQAIKFDSKTHIPLVTD 980
Query: 555 ECTGCTLCLSI 565
+CTGCTLCLS+
Sbjct: 981 DCTGCTLCLSV 991
>gi|156543632|ref|XP_001604620.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Nasonia
vitripennis]
Length = 1025
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/393 (67%), Positives = 321/393 (81%), Gaps = 1/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP+DAV+FEV+LV+DLGVKIE R LS +D+T++KL+ GY IF+G G P
Sbjct: 227 AAEIPQYRLPYDAVSFEVDLVRDLGVKIEFGRELSEKDLTVKKLQNSGYEVIFLGFGLPE 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+PIF GLT EMGFYTSK FLP V+ SK G+C CK LP L G V+VLGAGDTAF
Sbjct: 287 PKSVPIFDGLTPEMGFYTSKNFLPAVSQGSKPGMCA-CKSTGLPNLYGNVVVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFR+G TNIRAVPEE++LA +EKCEF+PF SP +V VK +KI
Sbjct: 346 DCATSALRCGAKKVFVVFRRGFTNIRAVPEEMELAKDEKCEFIPFASPKKVIVKGSKITA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ+E GEW EDE+Q ++LK +++ISAFGS L D+ V A++PVKL+++G PEV+
Sbjct: 406 IEFYRTEQDENGEWKEDEDQLVRLKVSFVISAFGSGLYDSAVKNALEPVKLNRWGTPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
+M T++PGVFCGGD A +S TTVESVNDGKTA+W+IHKYIQEK+ LTVP +P LPKF
Sbjct: 466 GNSMRTTIPGVFCGGDLAGVSQTTVESVNDGKTASWYIHKYIQEKHGLTVPKEPQLPKFH 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVE+CG+KF NPFGLASAPP T+ +M+RR+FE GWGFAVTKTF L KDMVTN
Sbjct: 526 TPIDDVDLSVEVCGIKFENPFGLASAPPATSCAMIRRSFEAGWGFAVTKTFGLDKDMVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
+SPRIVKGTT + YGPEQ SFLNIELISEKTA
Sbjct: 586 ISPRIVKGTTDGYHYGPEQSSFLNIELISEKTA 618
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/258 (68%), Positives = 215/258 (83%), Gaps = 2/258 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMCTYNK DW EL++ E G +ALELNLSCPHGMGE+GMGLACGQDPE+VRNI+
Sbjct: 636 VVIASIMCTYNKADWTELAQMAEATGCEALELNLSCPHGMGEKGMGLACGQDPELVRNIA 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFFVKLTPNIT++ +AKAAYEG+ADGVSAINTV GLMS+ ADG PWPAVG
Sbjct: 696 RWVRAAVKIPFFVKLTPNITDVVALAKAAYEGQADGVSAINTVQGLMSVKADGTPWPAVG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ K TTYGGVSGNATRP+ L+A+S +AK P FPILGIGG+DSA+V+LQF+Q GA +Q+
Sbjct: 756 SAKATTYGGVSGNATRPIALRAISKVAKALPGFPILGIGGVDSAEVSLQFLQCGARILQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
SA+QNQDFT+++DY TGL+ LLYLKS LKGWDGQSPPT HQKGKP + G++
Sbjct: 816 GSAIQNQDFTLIEDYTTGLKALLYLKSVGHLKGWDGQSPPTFKHQKGKPV-SLQHALGQS 874
Query: 804 IPNFGEYKKIRENLITEL 821
+P FGEY+K+RE E+
Sbjct: 875 VPYFGEYQKLREKKAAEI 892
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 391 FSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYK 450
F+L +D T + + + HL G + S + K + L Q++P FGEY+
Sbjct: 824 FTLIEDYTTGLKALLYLKSVG-HLKGWDGQSPPTFKHQKGKPVSLQHALGQSVPYFGEYQ 882
Query: 451 KIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDN 510
K+RE E+ ++ N V L+ P R PV+ I ++ D+IG+A+ + NYT+LDN
Sbjct: 883 KLREKKAAEIK-EQSNLLDVELK---PTRPAPKPVQPIPTINDLIGKALPHIGNYTQLDN 938
Query: 511 KKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
KKQVVALI+DDMCINCGKCYMAC DSGYQAI F+ ETH VTD+CTGCTLCLS+
Sbjct: 939 KKQVVALIDDDMCINCGKCYMACADSGYQAIQFNAETHIPKVTDDCTGCTLCLSV 993
>gi|350408298|ref|XP_003488363.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Bombus
impatiens]
Length = 1024
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/392 (68%), Positives = 315/392 (80%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D VNFE++L+KDLGVKIE ++LS D+TI+ L+ GY AIF+GIG P
Sbjct: 225 SSEIPQYRLPYDVVNFEIDLIKDLGVKIELGKALSENDLTIQGLQSSGYKAIFLGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A +PIF LTEEMGF+TSK+FLP+VA SK G+C CK LP L G V+VLGAGDTAF
Sbjct: 285 AKTVPIFSNLTEEMGFFTSKSFLPKVAKGSKPGMCA-CKSNELPSLHGNVVVLGAGDTAF 343
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFRKG TNIRAVPEE LA EEKCEF+PF SP +V ++ KI
Sbjct: 344 DCATSALRCGAKKVFVVFRKGFTNIRAVPEEFDLAREEKCEFVPFQSPKRVITRNGKIVA 403
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ+E EW+EDEEQ +LK N+IISAFGS L D++V A+ P+K++K+ PEV+
Sbjct: 404 IEFCRTEQDENDEWIEDEEQICRLKTNFIISAFGSGLQDSNVTRAMVPIKMNKWNLPEVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM+TSVPGVFCGGD A ++ TTVESVNDGK AAW+IHKYIQ N V + P LPKF
Sbjct: 464 TETMSTSVPGVFCGGDLAGVAHTTVESVNDGKIAAWYIHKYIQNCYNSEVSEVPQLPKFH 523
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT S+M+RRAFE GW F VTKTFSL KD+VTN
Sbjct: 524 TPIDDVDISVEMCGLKFENPFGLASAPPTTCSTMIRRAFEAGWSFVVTKTFSLDKDLVTN 583
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRI+KGTTSR+ YGPEQ SFLNIELISEK+
Sbjct: 584 VSPRIIKGTTSRYHYGPEQSSFLNIELISEKS 615
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/266 (72%), Positives = 219/266 (82%), Gaps = 5/266 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMCTYN+ DW EL++K E AGADALELNLSCPHGMGE GMGLACGQDPE+VRNIS
Sbjct: 634 IIIASIMCTYNRADWTELAQKAESAGADALELNLSCPHGMGESGMGLACGQDPELVRNIS 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFFVKLTPNIT+I IAKAAYEG ADGVSAINTV LM L AD PWPAVG
Sbjct: 694 RWVREAIKIPFFVKLTPNITDIVSIAKAAYEGHADGVSAINTVQSLMGLHADATPWPAVG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK TTYGG+SGNATRP+ L+AVSSI+K P FPILGIGGIDSADVALQF+ GA +Q+
Sbjct: 754 IKKATTYGGMSGNATRPLALRAVSSISKNLPGFPILGIGGIDSADVALQFLHCGASILQV 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFT++DDY+TGL+ LLYLKS Q+K WDGQSPPT HQKGKP + GK
Sbjct: 814 CSAVQNQDFTLIDDYVTGLKALLYLKSLEQVKNWDGQSPPTFKHQKGKPVV-LQHALGKN 872
Query: 804 IPNFGEYKKIRENLITELNLKKLNSD 829
IP FGEY+++RE I E+ KLNS+
Sbjct: 873 IPYFGEYQRLREQKIAEI---KLNSN 895
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 12/131 (9%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSD----GVSLQNGLPKRQINTPVETILSVKDV 494
L + IP FGEY+++RE I E+ KLNS+ V + PK P+ + ++K+V
Sbjct: 869 LGKNIPYFGEYQRLREQKIAEI---KLNSNPLDKSVEITRPAPK-----PIAPVPTIKNV 920
Query: 495 IGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTD 554
IG+A+ ++ Y +L+NK+QVVALI+DDMCINCGKCYMAC DSGYQAI F ETH VTD
Sbjct: 921 IGKALSHISTYKDLNNKEQVVALIDDDMCINCGKCYMACADSGYQAIRFDSETHIPLVTD 980
Query: 555 ECTGCTLCLSI 565
+CTGCTLCLS+
Sbjct: 981 DCTGCTLCLSV 991
>gi|340720146|ref|XP_003398504.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 2
[Bombus terrestris]
Length = 1022
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/392 (68%), Positives = 316/392 (80%), Gaps = 5/392 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D VNFE++L+KDLGVKIE ++LS D+TI+ L+ GY AIF+GIG P
Sbjct: 225 SSEIPQYRLPYDVVNFEIDLIKDLGVKIELGKALSENDLTIQGLQSSGYKAIFLGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A IPIF LTEEMGF+TSK+FLP+VA SK G+C CK LP L+G V+VLGAGDTAF
Sbjct: 285 AKTIPIFSNLTEEMGFFTSKSFLPKVAKGSKPGMCA-CKSNGLPSLRGNVVVLGAGDTAF 343
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFRKG TNIRAVPEE LA EEKCEF+PF SP +V ++ KI
Sbjct: 344 DCATSALRCGAKKVFVVFRKGFTNIRAVPEEFDLAREEKCEFVPFQSPKRVITRNGKIVA 403
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ+E EW+EDEEQ +LKAN+IISAFGS L D+ V A+ P+K++K+ PEV+
Sbjct: 404 IEFCRTEQDENDEWIEDEEQICRLKANFIISAFGSGLQDSSVTRAMVPIKMNKWNLPEVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM+TSVPGVFCGGD A ++ TTVESVNDGK AAW+IHKYIQ + V + P LPKF
Sbjct: 464 TETMSTSVPGVFCGGDLAGVAHTTVESVNDGKIAAWYIHKYIQ----VIVSEVPQLPKFH 519
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT S+M+RRAFE GW F VTKTFSL KD+VTN
Sbjct: 520 TPIDDVDISVEMCGLKFENPFGLASAPPTTCSTMIRRAFEAGWSFVVTKTFSLDKDLVTN 579
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRI+KGTTSR+ YGPEQ SFLNIELISEK+
Sbjct: 580 VSPRIIKGTTSRYHYGPEQSSFLNIELISEKS 611
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 219/268 (81%), Gaps = 7/268 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMCTYN+ DW EL++K E AGADALELNLSCPHGMGE GMGLACGQDPE+VRNIS
Sbjct: 630 IIIASIMCTYNRADWTELAQKAESAGADALELNLSCPHGMGESGMGLACGQDPELVRNIS 689
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFFVKLTPNIT+I IAKAA+EG ADGVSAINTV LM L AD PWPAVG
Sbjct: 690 RWVREAIKIPFFVKLTPNITDIVSIAKAAHEGHADGVSAINTVKSLMGLHADATPWPAVG 749
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK TTYGG+SGNATRP+ L+AVSSI++ P FPILGIGGIDSADVALQF+ GA +Q+
Sbjct: 750 IKKATTYGGMSGNATRPLALRAVSSISQNLPGFPILGIGGIDSADVALQFLHCGASILQV 809
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFT++DDY+TGL+ LLYLKS Q+K WDGQSPPT HQKGKP + GK
Sbjct: 810 CSAVQNQDFTLIDDYVTGLKALLYLKSLEQVKDWDGQSPPTFKHQKGKPVV-LQHALGKV 868
Query: 804 --IPNFGEYKKIRENLITELNLKKLNSD 829
IP FGEY+++RE I E+ KLNS+
Sbjct: 869 SNIPYFGEYQRLREQKIAEI---KLNSN 893
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 90/127 (70%), Gaps = 12/127 (9%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSD----GVSLQNGLPKRQINTPVETILSVKDVIGQA 498
IP FGEY+++RE I E+ KLNS+ V + PK P+ + ++K+VIG+A
Sbjct: 871 IPYFGEYQRLREQKIAEI---KLNSNPLDKSVEITRPAPK-----PIAPVPTIKNVIGKA 922
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ + Y +L+NK+QVVALI+DDMCINCGKCYMAC DSGYQAI F +TH VTD+CTG
Sbjct: 923 LSHIGTYKDLNNKEQVVALIDDDMCINCGKCYMACADSGYQAIKFDSKTHIPLVTDDCTG 982
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 983 CTLCLSV 989
>gi|307172627|gb|EFN63986.1| Dihydropyrimidine dehydrogenase [NADP+] [Camponotus floridanus]
Length = 470
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/393 (67%), Positives = 317/393 (80%), Gaps = 7/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+DAVNFEV+LV+DLGVKIE ERSLS D+TI+ L+ GY AIF+GIG P
Sbjct: 79 SSEIPQYRLPYDAVNFEVDLVRDLGVKIELERSLSEDDLTIQTLQDAGYKAIFLGIGLPE 138
Query: 101 ANVIPIFQGL--TEE----MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLG 154
+ IPIF+ L TE+ +GF+TSK+FLP VA SK G+C CK++ LP L G VIVLG
Sbjct: 139 SKNIPIFENLMLTEKDPTKIGFFTSKSFLPAVAKGSKPGMCA-CKRQELPSLYGNVIVLG 197
Query: 155 AGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVK 214
AGDTAFDCATSALRCGA KV VVFRKG TN+RAVPEE+ LA EEKCEF+PF SP QV ++
Sbjct: 198 AGDTAFDCATSALRCGAKKVFVVFRKGFTNVRAVPEEMDLAKEEKCEFIPFQSPKQVILR 257
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
+ KI ++F +TEQNEKGEW+EDEEQ+ LK N++ISAFGS L + V A+ P+K++ +
Sbjct: 258 NGKIFAIEFCKTEQNEKGEWIEDEEQKFVLKTNFVISAFGSGLYSSTVKNAMAPIKINSW 317
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKP 334
PEV+ TM TSVPGVFCGGD A ++ TTVESVNDGKTAAW++HKYIQE LTVP+ P
Sbjct: 318 NLPEVDENTMMTSVPGVFCGGDLAGVAQTTVESVNDGKTAAWYMHKYIQESYGLTVPETP 377
Query: 335 CLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQ 394
LPKF + ID VD+S+E+CGLKF NPFGLASAPP T S+M+RRAFE GW FAVTKTFSL
Sbjct: 378 QLPKFHTAIDDVDLSIEMCGLKFENPFGLASAPPCTTSAMIRRAFEAGWAFAVTKTFSLD 437
Query: 395 KDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIEL 427
KD++TNVSPRI+KGTTSRH YGPEQ SFLNIE
Sbjct: 438 KDLITNVSPRIIKGTTSRHHYGPEQSSFLNIEF 470
>gi|432915661|ref|XP_004079198.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Oryzias
latipes]
Length = 1021
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/393 (67%), Positives = 318/393 (80%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP++ V FE+EL+KDLGVK+ CE+ L +T+ L+K+G+ A+FIGIG P
Sbjct: 225 TSEIPQFRLPYEVVQFEIELMKDLGVKVVCEKGLGVNGMTLTSLKKEGFKAVFIGIGLPQ 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
AN IFQGLT + GF+TSK FLP VA++SKKG+C C+ +LP L+G VIVLGAGDTAF
Sbjct: 285 ANRAKIFQGLTGDQGFFTSKDFLPLVASASKKGMCQ-CR-SALPELRGAVIVLGAGDTAF 342
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V V FRKG TNIRAVPEE++LA EEKCEFLPF+SP +V +K+ ++AG
Sbjct: 343 DCATSALRCGARRVYVCFRKGFTNIRAVPEEMELAKEEKCEFLPFLSPREVIMKNGRVAG 402
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ E+G+WVEDEEQ +KLKA+YIISAFGS L D V EA+ PVKL +G PEVN
Sbjct: 403 LQFCRTEQTEEGDWVEDEEQVVKLKADYIISAFGSILNDPKVTEAMAPVKLSHWGTPEVN 462
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD A L++TTVESVNDGK A+WHIH+YIQ TV P LP F
Sbjct: 463 TETMQTSEPWVFAGGDVAGLANTTVESVNDGKQASWHIHRYIQSLYGQTVETAPKLPLFY 522
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ID VDISVE+CG+KFPNPFGLASAPPTT+++M+RRAFE GWGFA+TKTF L KD+VTN
Sbjct: 523 SAIDQVDISVEMCGIKFPNPFGLASAPPTTSTAMIRRAFEQGWGFALTKTFGLDKDLVTN 582
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS LYGP GSFLNIELISEKTA
Sbjct: 583 VSPRIVRGTTSGPLYGPGLGSFLNIELISEKTA 615
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 207/267 (77%), Gaps = 1/267 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+++I+SIMC YNKDDW L+K E +GADALELNLSCPHGMGERGMGLACGQDP +VRNI
Sbjct: 632 NVVISSIMCAYNKDDWTVLAKMAEASGADALELNLSCPHGMGERGMGLACGQDPVLVRNI 691
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR++V IPFF KLTPN+TNI DIAKAA+EG ADGV+A NTVSGLM L AD +PWP V
Sbjct: 692 CRWVRAAVSIPFFAKLTPNVTNIVDIAKAAHEGGADGVTATNTVSGLMGLKADSSPWPGV 751
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSGNA RP+ LKAVS+IAK P FPIL GGIDSA+ LQF+ AGA +Q
Sbjct: 752 GAAKRTTYGGVSGNAIRPIALKAVSAIAKAIPGFPILATGGIDSAETGLQFLHAGASVLQ 811
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+CSA+QNQDFTV++DY GL+ LLYLKS +LK WDGQSPPT HQKGK + ++ GK
Sbjct: 812 VCSAIQNQDFTVIEDYCLGLKALLYLKSLELKDWDGQSPPTQKHQKGKSVPKVQELVGKG 871
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDG 830
+P+FG Y + + I + KKL G
Sbjct: 872 LPSFGPYLQQKTEAIAKYK-KKLRDAG 897
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + + I + KKL G + +INTP + + +VKDVI +A++
Sbjct: 870 KGLPSFGPYLQQKTEAIAKYK-KKLRDAGETDVKQPNISRINTPPKPVPAVKDVIARALR 928
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y ELDN +QV ALI++DMCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 929 HIGAYQELDNMEQVQALIDEDMCINCGKCYMTCNDSGYQAIQFDPETHLPFVTDSCTGCT 988
Query: 561 LCLSI 565
LCL++
Sbjct: 989 LCLTV 993
>gi|321459596|gb|EFX70648.1| hypothetical protein DAPPUDRAFT_202177 [Daphnia pulex]
Length = 1040
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/395 (66%), Positives = 325/395 (82%), Gaps = 4/395 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP++ V+FE+EL+KDLGVKIE +SLS DIT++ L+ GY +FIGIG P
Sbjct: 230 SSEIPQYRLPYEVVDFEIELMKDLGVKIERGKSLSLADITLQGLKDQGYQGVFIGIGLPQ 289
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A IPIF+ L+E+MGFYTSK FLP+V+ +SK G+C CK +LP L G VIVLGAGDTAF
Sbjct: 290 AKRIPIFENLSEQMGFYTSKDFLPKVSVASKPGMCK-CK-SALPSLHGNVIVLGAGDTAF 347
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG N+RAVPEE+ LA EEKCEF+PF++P +V VK +++AG
Sbjct: 348 DCATSALRCGAKRVFVVFRKGFNNVRAVPEEMGLAIEEKCEFMPFLAPKEVIVKGDRVAG 407
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ + G W+EDEEQ ++LKA++IISAFGS L + DV A+ P+K +++G PEV+
Sbjct: 408 LKFLRTEQLDDGTWIEDEEQEVRLKADWIISAFGSGLENADVKAAMAPIKFNRWGLPEVD 467
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN--LTVPDKPCLPK 338
TM +S+ VFCGGD A +++TTVESVNDGKTAAW++H+YIQ+ ++ L + +P LPK
Sbjct: 468 TRTMQSSLDWVFCGGDIAGVAETTVESVNDGKTAAWYMHQYIQQSSHGSLLISSEPKLPK 527
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDI VE+CGLKFPNPFGLASAPPTT S+M+RR FE GWGFA+TKTFSL KD+V
Sbjct: 528 FYTPIDLVDIGVEMCGLKFPNPFGLASAPPTTTSAMIRRGFEAGWGFALTKTFSLDKDIV 587
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
TNVSPRIV+GTTS H+YGP QGSFLNIELISEKTA
Sbjct: 588 TNVSPRIVRGTTSGHIYGPGQGSFLNIELISEKTA 622
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 175/258 (67%), Positives = 207/258 (80%), Gaps = 1/258 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+YN+ DW EL++ AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 640 ILIASIMCSYNEADWTELARMAAAAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 699
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++V IPFF KLTPN+T+I IA+AAYEG+ADGV+A NTVSGLM + +DG+ WP++G
Sbjct: 700 RWVRAAVTIPFFAKLTPNVTSIVAIARAAYEGQADGVTATNTVSGLMGVRSDGSAWPSIG 759
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGG+SGNA RP+ LKAVS+IA+ P FPIL GGIDSAD ALQF+Q GA +QI
Sbjct: 760 KEQKTTYGGMSGNAIRPIALKAVSAIARALPGFPILATGGIDSADAALQFLQCGASVLQI 819
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTVVDDYITGL+TL+YLKS LKGWDGQSPPT HQ GKP Q +
Sbjct: 820 CSSVQNQDFTVVDDYITGLKTLMYLKSIDGLKGWDGQSPPTIRHQVGKPVTQLDTIVDQH 879
Query: 804 IPNFGEYKKIRENLITEL 821
+PNFG + K RE + E
Sbjct: 880 LPNFGPFMKEREKRVAEF 897
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q +PNFG + K RE + E KK P R N P + ++ +I A+
Sbjct: 878 QHLPNFGPFMKEREKRVAEF--KKAEDLLAEEYQPKPLRPANEPARPVPPIRAIIAAAID 935
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
R+ Y +LDNK+QVVA+I+++MCINCGKCYM CNDSGYQAI F P TH V +CTGCT
Sbjct: 936 RIGTYADLDNKQQVVAMIDEEMCINCGKCYMTCNDSGYQAIVFDPVTHLPKVNQDCTGCT 995
Query: 561 LCLSI 565
LCLS+
Sbjct: 996 LCLSV 1000
>gi|242017470|ref|XP_002429211.1| Dihydropyrimidine dehydrogenase, putative [Pediculus humanus
corporis]
gi|212514100|gb|EEB16473.1| Dihydropyrimidine dehydrogenase, putative [Pediculus humanus
corporis]
Length = 1015
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/391 (68%), Positives = 315/391 (80%), Gaps = 2/391 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQYRLP +AVNFE+ELVKDLGV I R L+ D+TI+KL+ DGY AIFIGIG P
Sbjct: 225 SEIPQYRLPVEAVNFEIELVKDLGVNIVNGRRLTIDDLTIKKLKNDGYDAIFIGIGLPEP 284
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
+IP F+ LT EMGFYTSKTFLP V+ SK G+C CK + LPIL GTVIVLGAGDTAFD
Sbjct: 285 KIIPEFENLTPEMGFYTSKTFLPLVSKGSKSGMCH-CKID-LPILNGTVIVLGAGDTAFD 342
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSALRCGA KV VVFRKG NI+AVPEE QLA EEKCEF+PF+SP +V +K N+I G+
Sbjct: 343 CATSALRCGARKVFVVFRKGFRNIKAVPEEFQLAHEEKCEFIPFLSPKKVLIKGNRIIGL 402
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
+F+RTEQ + EW+ED EQ +KLK NYIISAFGS L D V +A++P+K +K+ PEVN
Sbjct: 403 EFSRTEQLDNDEWIEDHEQTVKLKTNYIISAFGSGLGDVKVKQAMEPLKFNKWNLPEVNE 462
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS GVF GGD A +S+TTVESVNDGKTAAW IHKY+Q K+ + +P+ P LPKF +
Sbjct: 463 KTMETSEGGVFAGGDIAGISETTVESVNDGKTAAWFIHKYLQNKDGIEIPENPKLPKFYT 522
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
ID VD+S+++C +KF NPFGLASAPPTT+SSM+RRAFE GWGF VTKTF L KD+ NV
Sbjct: 523 EIDDVDLSIDVCNIKFENPFGLASAPPTTSSSMIRRAFEAGWGFVVTKTFCLDKDLGINV 582
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
SPRIVKGTTS++ YGPEQGSFLNIE+ISEK+
Sbjct: 583 SPRIVKGTTSKNHYGPEQGSFLNIEIISEKS 613
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/266 (69%), Positives = 219/266 (82%), Gaps = 1/266 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+Y++DDW ELSKK E++GADALELNLSCPHGMGERGMGLACGQDPE+V+NIS
Sbjct: 632 ILIASIMCSYDRDDWTELSKKAEESGADALELNLSCPHGMGERGMGLACGQDPELVQNIS 691
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVRS++KIPFFVKLTPN+T+I +IA+AAYEGKA+GVSAINTVSGLM + + PWP+VG
Sbjct: 692 EWVRSAIKIPFFVKLTPNVTDIVEIARAAYEGKANGVSAINTVSGLMGVKVNATPWPSVG 751
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGG SGNA RPMGLKAVS+I+K P FPILG+GGIDSA+ LQF+Q GA +Q+
Sbjct: 752 VALRTTYGGTSGNAIRPMGLKAVSAISKALPGFPILGMGGIDSAEAGLQFLQCGATLLQV 811
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTV+DDY+TGL+ LLYL+S +L WDGQSPPT HQKGKP D+ GK
Sbjct: 812 CSAVQNQDFTVIDDYVTGLKALLYLRSIDELSHWDGQSPPTIPHQKGKPVMTLTDENGKT 871
Query: 804 IPNFGEYKKIRENLITELNLKKLNSD 829
+ +FG YK+ RE + ELN K + D
Sbjct: 872 LTHFGIYKEKREKIEAELNATKSSFD 897
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 88/128 (68%), Gaps = 10/128 (7%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQ---NGLPKRQINTPVETILSVKDVIGQ 497
+ + +FG YK+ RE + ELN K + D + + N +PK++I T +KD+IG+
Sbjct: 870 KTLTHFGIYKEKREKIEAELNATKSSFDVETEKCRPNYVPKKKIPT-------LKDIIGK 922
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++ + +Y L+NK+QVVALINDD+C+NCGKCYMACNDSGYQAI F P TH V D CT
Sbjct: 923 SLPFIGSYKSLNNKEQVVALINDDLCLNCGKCYMACNDSGYQAIEFDPNTHLPLVKDNCT 982
Query: 558 GCTLCLSI 565
GC LCLS+
Sbjct: 983 GCALCLSV 990
>gi|410924025|ref|XP_003975482.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Takifugu
rubripes]
Length = 1021
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 319/393 (81%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP DAV FE++L+KDLGVK+ CE+ L + +T+ L+++G+ A+FIGIG P
Sbjct: 225 TSEIPQFRLPSDAVQFEIDLMKDLGVKVVCEKGLGMKGMTLTSLKEEGFKAVFIGIGLPQ 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
AN IF GLT + GF+TSK FLP VA++SKKG+ G C LP L+G VI+LGAGDTAF
Sbjct: 285 ANRAKIFNGLTMDQGFFTSKDFLPLVASASKKGMQGCCSL--LPNLRGLVIILGAGDTAF 342
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V V FRKG TNIRAVPEE++LA EE+CEFLPF+SP +V +K+ +IAG
Sbjct: 343 DCATSALRCGAKRVYVCFRKGFTNIRAVPEEMELAKEEQCEFLPFLSPREVIMKNGRIAG 402
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ E+G+W+ED+EQ ++LKA+YIISAFGS L D V A+ PVKL+++G PEV+
Sbjct: 403 LQFCRTEQTEEGDWLEDQEQVVRLKADYIISAFGSILSDPQVTAAMAPVKLNRWGTPEVD 462
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD A L++TTVESVNDGK AAWHIH+YIQ TV P LP F
Sbjct: 463 TDTMQTSEPWVFAGGDVAGLANTTVESVNDGKQAAWHIHRYIQSLYGHTVEPVPKLPLFY 522
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S IDLVDIS+ +CG+KFPNPFGLASAPPTT+++M+RRAFE GWGFAVTKTF L KD+VTN
Sbjct: 523 SAIDLVDISIAVCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFAVTKTFGLDKDLVTN 582
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS +LYGP QGSFLNIELISEKTA
Sbjct: 583 VSPRIVRGTTSGNLYGPGQGSFLNIELISEKTA 615
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 171/255 (67%), Positives = 202/255 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+++I+SIMC+YNK+DW EL+K E +GADALELNLSCPHGMGERGMGLACGQDP +VRNI
Sbjct: 632 NVVISSIMCSYNKEDWTELAKMAEDSGADALELNLSCPHGMGERGMGLACGQDPVLVRNI 691
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR++V IPFF KLTPN+TNI DIAKAA+EG A+GV+A NTVSG+M L ADG PWP+V
Sbjct: 692 CRWVRAAVSIPFFAKLTPNVTNIVDIAKAAHEGGANGVTATNTVSGMMGLKADGAPWPSV 751
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSAD LQF+ AGA +Q
Sbjct: 752 GKGKRTTYGGVSGNAIRPIALRAVSAIARAIPGFPILATGGIDSADTGLQFLHAGASVLQ 811
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+CSAVQNQD TV+ DY GL+ LLYLKS L W+GQSPPT HQKGKP + D GK
Sbjct: 812 VCSAVQNQDLTVIGDYCVGLKALLYLKSLNLNYWEGQSPPTEKHQKGKPVPKLEDLIGKN 871
Query: 804 IPNFGEYKKIRENLI 818
IP+FG Y K R+ +
Sbjct: 872 IPSFGPYLKKRKEAL 886
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
IP+FG Y K R+ + + K ++D ++ R + + I +VKDVI +++ +
Sbjct: 872 IPSFGPYLKKRKEALADYKKKLKDADKADMKEPASIR-CSMVKQPIPAVKDVIARSLNYI 930
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y EL+N +QV ALI+++MCINCGKCYM CNDSGYQAI F PETH V D CTGCTLC
Sbjct: 931 GAYQELNNLEQVEALIDEEMCINCGKCYMTCNDSGYQAIKFDPETHIPKVMDSCTGCTLC 990
Query: 563 LSI 565
LS+
Sbjct: 991 LSV 993
>gi|443734974|gb|ELU18829.1| hypothetical protein CAPTEDRAFT_161594 [Capitella teleta]
Length = 1026
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/406 (63%), Positives = 327/406 (80%), Gaps = 3/406 (0%)
Query: 32 ERPVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSL-STRDITIEKLRKDGYT 90
RP SSEIPQ+RLP+D VN+EVEL+KDLGVKIEC +SL S +T++ LR GY
Sbjct: 218 RRPFVGGLSSSEIPQFRLPYDVVNWEVELMKDLGVKIECGKSLDSNGGLTLQGLRNSGYQ 277
Query: 91 AIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTV 150
A+F+GIG P+ +P+FQ LTE+MGFYTSK FLP+V+ +SK G+C CK + LP L GTV
Sbjct: 278 AVFLGIGLPDPKKLPLFQDLTEQMGFYTSKDFLPKVSAASKPGMCS-CKSK-LPNLSGTV 335
Query: 151 IVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ 210
+VLGAGDTAFDCATSALRCGA +V VVFRKG TNIRAVPEE++LA EEKCEF+PFM+P +
Sbjct: 336 VVLGAGDTAFDCATSALRCGAKRVFVVFRKGFTNIRAVPEEMELAREEKCEFMPFMAPYK 395
Query: 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVK 270
+ K+N I+ M+F RTEQ++ G+WVED+EQ I+LKA+++ISAFGS L + +V+EA++P+K
Sbjct: 396 IHTKNNHISAMEFFRTEQDDNGQWVEDKEQMIRLKADFVISAFGSGLTEKNVVEALEPLK 455
Query: 271 LDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTV 330
L+++G P+V+ T M TS P VF GGD A ++ TTVESVNDGKTA+W++HKY+Q L V
Sbjct: 456 LNRWGLPDVDPTQMTTSEPWVFSGGDIAGVAQTTVESVNDGKTASWYMHKYLQSLGKLEV 515
Query: 331 PDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKT 390
P LPKF + ID VD+S+ +CG++F NPFGLASAPPTT +M+RRAFE GWGFA+TKT
Sbjct: 516 PKIATLPKFFTPIDNVDVSITMCGIRFENPFGLASAPPTTTPAMIRRAFEAGWGFALTKT 575
Query: 391 FSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIF 436
FSL KD+VTNVSPRIV+GTTS ++GP QGSFLNIELISEKTA +
Sbjct: 576 FSLDKDLVTNVSPRIVRGTTSGQVFGPGQGSFLNIELISEKTAAFW 621
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/256 (63%), Positives = 202/256 (78%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIM ++NKDDW EL+ E +GADALELNLSCPHGMGERGMG+ACGQDP +V NI
Sbjct: 636 VVIASIMSSFNKDDWTELAIMAEASGADALELNLSCPHGMGERGMGMACGQDPNLVLNIC 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF KLTPN+TN+T IAKAA +G ADGV+A NTVSG+M L DG WP +G
Sbjct: 696 RWVRAAVKIPFFAKLTPNVTNVTVIAKAAKDGGADGVTATNTVSGMMGLKQDGAAWPNIG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGG+SGNA RP+ L+AVS+I P +PIL GGID A+V +QF+ AGA +Q+
Sbjct: 756 KEKRTTYGGMSGNAIRPIALRAVSAIGNALPGYPILATGGIDCAEVGMQFLYAGASVLQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAI 804
CSAVQNQD+T++DDYITGL+ LLYL+S +L GWDGQSPPTP HQ GKP +D G+++
Sbjct: 816 CSAVQNQDYTLIDDYITGLKCLLYLQSLELAGWDGQSPPTPAHQLGKPVPAVKDIVGQSL 875
Query: 805 PNFGEYKKIRENLITE 820
PNFG Y + + LI +
Sbjct: 876 PNFGPYLQKKNELIAQ 891
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 89/125 (71%), Gaps = 4/125 (3%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q++PNFG Y + + LI + +K +D + + P R + P + I SV+D++G+A+
Sbjct: 873 QSLPNFGPYLQKKNELIAQ---QKKGAD-ILEDHKPPMRNVLVPQKPIPSVQDMVGKALA 928
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
R+ Y +LDN++QVVALI++DMCINCGKCYM CNDSGYQA+ F PETH V D CTGCT
Sbjct: 929 RIGAYNDLDNQQQVVALIDEDMCINCGKCYMTCNDSGYQAVEFDPETHLPKVNDNCTGCT 988
Query: 561 LCLSI 565
LCLS+
Sbjct: 989 LCLSV 993
>gi|47211504|emb|CAF94123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1103
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 317/393 (80%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP++AV FE++L+K+LGVK+ CE+ L +T+ L+++G+ A FIGIG P
Sbjct: 301 TSEIPQFRLPYEAVQFEIDLMKNLGVKVVCEKGLGMNGMTLTSLKEEGFKAAFIGIGLPQ 360
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
AN IFQGLT + GF+TSK FLPRVA +SKKG+ C SLP L+G VIVLGAGDTAF
Sbjct: 361 ANRAEIFQGLTVDQGFFTSKDFLPRVALASKKGMQRCC--SSLPSLRGVVIVLGAGDTAF 418
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V V FRKG TNIRAVPEE++LA EE+CEFLPF+SP +V +K+ +IAG
Sbjct: 419 DCATSALRCGAKRVFVCFRKGFTNIRAVPEEMELAKEEQCEFLPFLSPREVIMKNGRIAG 478
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ E+G+W+EDEEQ ++LKA+YIISAFGS L D V A+ PVKL+++G PEV+
Sbjct: 479 LQFCRTEQTEEGDWLEDEEQVVRLKADYIISAFGSMLSDPQVTAAMAPVKLNRWGTPEVD 538
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK AAWHIH+YIQ TV P LP F
Sbjct: 539 SDTMQTSEPWVFAGGDVVGLANTTVESVNDGKQAAWHIHRYIQSLYGQTVDLVPKLPLFF 598
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ID VDISVE+CG+KFPNPFGLASAPPTT+++M+RR FE GWGFAVTKTF L KD+VTN
Sbjct: 599 SAIDQVDISVEVCGIKFPNPFGLASAPPTTSAAMIRRGFEQGWGFAVTKTFGLDKDLVTN 658
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS ++YGP QGSFLNIELISEKTA
Sbjct: 659 VSPRIVRGTTSGNVYGPGQGSFLNIELISEKTA 691
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 205/273 (75%), Gaps = 7/273 (2%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACG------QDP 617
+++I+SIMC+YNK+DW EL+K E +GADALELNLSCPHGMGERGMGLAC QDP
Sbjct: 708 NVVISSIMCSYNKEDWTELAKMAEDSGADALELNLSCPHGMGERGMGLACDVIYVFDQDP 767
Query: 618 EMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG 677
+VRNI WVR++V IPFF KLTPN+TNI DIAKAA+EG A+GV+A NTVSG+M L ADG
Sbjct: 768 VLVRNICRWVRAAVSIPFFAKLTPNVTNIVDIAKAAHEGGANGVTATNTVSGMMGLKADG 827
Query: 678 NPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQA 737
PWP+VG K TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSAD LQF+ A
Sbjct: 828 APWPSVGKGKRTTYGGVSGNAIRPIALRAVSAIARAIPGFPILATGGIDSADTGLQFLHA 887
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFR 797
GA +Q+CSAVQNQD TV+ DY GL+ LLYLKS L WDGQSPPT HQKGKP +
Sbjct: 888 GASVLQVCSAVQNQDLTVIGDYCVGLKALLYLKSLNLNTWDGQSPPTEKHQKGKPVPKLE 947
Query: 798 DKEGKAIPNFGEYKKIRENLITELNLKKLNSDG 830
D GK +P+FG Y K R I + KKL G
Sbjct: 948 DLIGKNVPSFGPYLKKRREAIADYK-KKLKDAG 979
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y K R I + KKL G + +T I +VKDVI +++ +
Sbjct: 954 VPSFGPYLKKRREAIADYK-KKLKDAGKDYVKEPTSIRCSTAKRPIPAVKDVIARSLNYI 1012
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y EL N +QV ALI+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCTLC
Sbjct: 1013 GAYQELSNLEQVEALIDEEMCINCGKCYMTCNDSGYQAIEFDPETHIPKVTDSCTGCTLC 1072
Query: 563 LSI 565
LS+
Sbjct: 1073 LSV 1075
>gi|241754001|ref|XP_002401173.1| dihydropyrimidine dehydrogenase, putative [Ixodes scapularis]
gi|215508370|gb|EEC17824.1| dihydropyrimidine dehydrogenase, putative [Ixodes scapularis]
Length = 833
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/393 (66%), Positives = 321/393 (81%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP+D V+FE++LVKDLGVK+E ++L RD T+E LRK+ Y+A+F+GIG P+
Sbjct: 29 SAEIPQYRLPYDVVSFELDLVKDLGVKVEFNKALG-RDFTLESLRKE-YSAVFLGIGLPD 86
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
VIPIF+GL E GFYTSKTFLP V+ +SK G+CG CK ++LP L G VIVLGAGDTAF
Sbjct: 87 PKVIPIFEGLDESHGFYTSKTFLPVVSRASKPGMCG-CK-QTLPSLFGNVIVLGAGDTAF 144
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE++LA EEKCEFLPF+SP + + +I
Sbjct: 145 DCATSALRCGAKRVFVVFRKGFTNIRAVPEEMELAREEKCEFLPFLSPRNLVMNGTRIKA 204
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ + G WVEDEEQ ++LKA+++ISAFGSTL D V+ A+ P+KL+K+G PEV+
Sbjct: 205 MEFLRTEQADDGTWVEDEEQMVRLKADFVISAFGSTLEDISVVGALSPLKLNKHGLPEVD 264
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
+M TS P VFCGGD A +++TTVE+VNDGKTA+WHIHKY+Q +N+ V P LP+F
Sbjct: 265 VESMRTSEPWVFCGGDLAGVAETTVEAVNDGKTASWHIHKYLQSLHNIDVAKIPALPRFY 324
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVD+SVE CGLKF NPFGLASAPPTT S+M+RRAF+ GWGFA+TKTF L KD+VTN
Sbjct: 325 TPIDLVDLSVEFCGLKFKNPFGLASAPPTTTSAMIRRAFQAGWGFALTKTFGLNKDVVTN 384
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++G+T H YGP GSFLNIELISEKTA
Sbjct: 385 VSPRIIRGSTFGHTYGPGLGSFLNIELISEKTA 417
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 169/279 (60%), Positives = 219/279 (78%), Gaps = 4/279 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMCT+++ DW EL++ E AGADALELNLSCPHGMGERGMGLACGQDP +VRNI
Sbjct: 435 VVIASIMCTFDEKDWTELAQMAETAGADALELNLSCPHGMGERGMGLACGQDPNLVRNIC 494
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
LWVR +VKIPFF KLTPN+TN+ DIAKAAYEGKADGV+A+NTVSGLM L + +PWP VG
Sbjct: 495 LWVRKAVKIPFFAKLTPNVTNVVDIAKAAYEGKADGVTAVNTVSGLMGLKYNSDPWPGVG 554
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGG+SGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ QF+QAGA +Q+
Sbjct: 555 AQKRTTYGGMSGNAIRPIALRAVSAIARALPGFPILATGGIDSAEAGFQFLQAGASVLQV 614
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS++QNQDFTV++DY+TGL+ LY+++ + ++ W+ QSPP HQKGKP + D E +
Sbjct: 615 CSSIQNQDFTVIEDYLTGLKAALYIRNLKGMEDWESQSPPVKPHQKGKPIVKLEDIENER 674
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPRQLK 842
+PNFG Y + +E++I E +K SD +S + R+L+
Sbjct: 675 LPNFGPYLQKKEDMIAE---EKKRSDLLSNHHVPQRELR 710
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 95/125 (76%), Gaps = 4/125 (3%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +PNFG Y + +E++I E +K SD +S + +P+R++ E I +V+DVIG++++
Sbjct: 673 ERLPNFGPYLQKKEDMIAE---EKKRSDLLS-NHHVPQRELRILKEKIPNVQDVIGESLK 728
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
++ + +LD K+QVVALI++DMCINCGKCYM CNDSGYQAITF +TH VT++CTGCT
Sbjct: 729 KIGTFGDLDVKQQVVALIDEDMCINCGKCYMTCNDSGYQAITFDKDTHLPFVTNDCTGCT 788
Query: 561 LCLSI 565
LCLS+
Sbjct: 789 LCLSV 793
>gi|348531404|ref|XP_003453199.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Oreochromis niloticus]
Length = 1021
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/392 (66%), Positives = 318/392 (81%), Gaps = 2/392 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQ+RLP++ V FE+ L+KDLGVK+ CE+ L +T++ L++DG+ A+FIGIG P A
Sbjct: 226 SEIPQFRLPYEVVQFEINLMKDLGVKVVCEKGLGVNGMTLKSLKEDGFKAVFIGIGLPQA 285
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
N IF+GLT + GF+TSK FLP VA++SKKG+C C+ SLP LKG VIVLGAGDTAFD
Sbjct: 286 NRAEIFKGLTVDQGFFTSKDFLPMVASASKKGMCQ-CRS-SLPELKGVVIVLGAGDTAFD 343
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSALRCGA +V V FR+G TNIRAVPEE++LA EE+CEFLPF+SP +V +K+ +AG+
Sbjct: 344 CATSALRCGAKRVYVCFRRGFTNIRAVPEEMELAKEEQCEFLPFLSPREVIMKNGHVAGL 403
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
QF RTEQ ++G+WVEDEEQ ++LKA+YIISAFGS L + V EA+ PVKL ++G PEVN
Sbjct: 404 QFCRTEQTKEGDWVEDEEQIVRLKADYIISAFGSMLNEPQVTEAMMPVKLSRWGTPEVNT 463
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS P VF GGD A L++TTVESVNDGK A+WHIH+YIQ + T+ P LP F S
Sbjct: 464 DTMQTSEPWVFAGGDIAGLANTTVESVNDGKQASWHIHRYIQSLHGQTIDPVPKLPLFYS 523
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
ID VDIS+E+CG+KFPNPFGLASAPPTT+++M+RRAFE GWGFA+TKTF L KD+VTNV
Sbjct: 524 AIDQVDISIEVCGIKFPNPFGLASAPPTTSTAMIRRAFEQGWGFALTKTFGLDKDLVTNV 583
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SPRIV+GTTS LYGP GSFLNIELISEKTA
Sbjct: 584 SPRIVRGTTSGPLYGPGLGSFLNIELISEKTA 615
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 211/265 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+++I+SIMC YNK+DW EL+K E++GADALELNLSCPHGMGERGMGLACGQDP +VRNI
Sbjct: 632 NVVISSIMCGYNKEDWTELAKMAEESGADALELNLSCPHGMGERGMGLACGQDPVLVRNI 691
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR ++ IPFF KLTPN+TNI DIAKAA+EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 692 CRWVREAISIPFFAKLTPNVTNIVDIAKAAHEGGADGVTATNTVSGLMGLKADGSPWPSV 751
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGG+SGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ AGA +Q
Sbjct: 752 GLEKRTTYGGISGNAIRPITLRAVSAIARAIPGFPILATGGIDSAESGLQFLHAGASLLQ 811
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+CSAVQNQDFT+++DY GL+ LLYLKS +LK WDGQSPPT HQKGKPA + GK+
Sbjct: 812 VCSAVQNQDFTLIEDYCVGLKALLYLKSLELKDWDGQSPPTERHQKGKPAPRLESLVGKS 871
Query: 804 IPNFGEYKKIRENLITELNLKKLNS 828
+P+FG Y + + I + L++
Sbjct: 872 LPSFGPYLQEKTEAIAACKKRLLDA 896
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+++P+FG Y + + I + L++ + R +N P + + VKDVI +A++
Sbjct: 870 KSLPSFGPYLQEKTEAIAACKKRLLDAGETDVVESNVSR-VNVPQKPVPPVKDVIARALR 928
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y EL+N +QV ALI+++MCINCGKCYM CNDSGYQAITF PETH VTD CTGCT
Sbjct: 929 HIGAYQELNNMEQVQALIDEEMCINCGKCYMTCNDSGYQAITFDPETHLPSVTDSCTGCT 988
Query: 561 LCLSI 565
LCLS+
Sbjct: 989 LCLSV 993
>gi|156369958|ref|XP_001628240.1| predicted protein [Nematostella vectensis]
gi|156215211|gb|EDO36177.1| predicted protein [Nematostella vectensis]
Length = 1081
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 257/394 (65%), Positives = 315/394 (79%), Gaps = 3/394 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLS-TRDITIEKLRKDGYTAIFIGIGKP 99
S+EIPQ+RLP+ V+FEV+L+ DLGVK+E R L + +TI+ L+ DGY IF+G+G P
Sbjct: 227 SAEIPQFRLPYSVVDFEVKLMMDLGVKVETGRGLGVSSGLTIQSLKNDGYKGIFLGMGLP 286
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159
+F+GL+E+ GFYTSK+FLP V++ SK G+C CK SLP L VIVLGAGDTA
Sbjct: 287 QPKKFHVFEGLSEQNGFYTSKSFLPVVSSGSKPGMCA-CK-SSLPQLSDNVIVLGAGDTA 344
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
FDC TSALRCGA +V VVFRKG TNIRAVPEE+QLA +EKCEFLPFMSP QV VKD KI
Sbjct: 345 FDCCTSALRCGARRVFVVFRKGFTNIRAVPEEMQLAVDEKCEFLPFMSPKQVHVKDGKIV 404
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
M+F RTEQ + G W ED EQ +K+KA ++ISAFGSTL + DV +A+ P+K +K+G PEV
Sbjct: 405 AMEFFRTEQLDDGTWTEDAEQTLKIKATFVISAFGSTLSNEDVKQALAPIKFNKWGLPEV 464
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
+ TMATS GVFCGGD A +++TTVESVNDGK AAW +H+++Q + LT+P +P LP+F
Sbjct: 465 SAETMATSAEGVFCGGDLAGIANTTVESVNDGKQAAWFMHQHLQSLHVLTIPSEPALPRF 524
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ +D VD+SVEICG+KFPNPFGLASAPPTT S+M+RR FE GWGFA+TKTFSL KD+VT
Sbjct: 525 FTPVDQVDLSVEICGIKFPNPFGLASAPPTTTSAMIRRGFEAGWGFALTKTFSLDKDIVT 584
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIV+GTTS HLYGP QGSFLNIELISEKT+
Sbjct: 585 NVSPRIVRGTTSGHLYGPGQGSFLNIELISEKTS 618
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/255 (65%), Positives = 196/255 (76%), Gaps = 1/255 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC Y+K DW L+K E AGADALELNLSCPHGMGERGMGLACGQD E+VRNI
Sbjct: 636 ILIASIMCGYSKQDWTTLAKMAEAAGADALELNLSCPHGMGERGMGLACGQDAELVRNIC 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+++ IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L WPA+G
Sbjct: 696 RWVRAAITIPFFAKLTPNVTDIVVIARAAKEGNADGVTATNTVSGLMGLKGTSEAWPAIG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGG+SGNA RP+ L+AVS+I + P FPIL GGIDSAD ALQF+ GA A+Q+
Sbjct: 756 REKRTTYGGMSGNAIRPIALRAVSAIGRALPGFPILATGGIDSADAALQFLHCGASALQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVVDDYI GL+ L+Y+KS + W+GQSPPTP HQ+GKP + D GK
Sbjct: 816 CSAVQNQDFTVVDDYINGLKCLMYMKSVDEYADWEGQSPPTPRHQQGKPVPKIADLVGKG 875
Query: 804 IPNFGEYKKIRENLI 818
+P+FG Y R +I
Sbjct: 876 LPSFGPYLVKRNEII 890
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 85/126 (67%), Gaps = 4/126 (3%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQ-NGLPKRQINTPVETILSVKDVIGQAV 499
+ +P+FG Y R +I K +SD +S + P R + SVKDV+G A+
Sbjct: 874 KGLPSFGPYLVKRNEIIAA---HKRSSDILSKEYEPEPVRPAVKQSKPTPSVKDVVGLAL 930
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGC 559
R+ Y +LDN++QVVALI+++MCINCGKCYM CNDSGYQAI F PETH VTD+CTGC
Sbjct: 931 DRIGTYGDLDNRQQVVALIDEEMCINCGKCYMTCNDSGYQAIKFDPETHLPTVTDDCTGC 990
Query: 560 TLCLSI 565
TLCLS+
Sbjct: 991 TLCLSV 996
>gi|340374761|ref|XP_003385906.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Amphimedon
queenslandica]
Length = 1027
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/392 (65%), Positives = 312/392 (79%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D V+FEVEL+KDLGVKIE RSLS D+T+E L K+GY AIFIGIG PN
Sbjct: 229 SSEIPQYRLPYDVVSFEVELMKDLGVKIELGRSLSAGDLTVEGLLKEGYEAIFIGIGLPN 288
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
V P+F+ LT GFYTSK FLP V ++SK G+C C SLP L G VIVLGAGDTAF
Sbjct: 289 PKVAPVFKSLTSANGFYTSKDFLPLVCSTSKPGMCS-CSSSSLPRLNGNVIVLGAGDTAF 347
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TN+RAVPEEV+LA EEKCEFLPF+SP QV K+ KI
Sbjct: 348 DCATSALRCGARRVFVVFRKGFTNMRAVPEEVELAKEEKCEFLPFLSPKQVIQKNGKIVA 407
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ + GEW+ DEEQ +KLK +Y+ISAFGS L + DV++A+ P+K +++ PEVN
Sbjct: 408 MEFCRTEQTDSGEWIIDEEQVVKLKVDYVISAFGSELSETDVIKAMSPIKFNQWSLPEVN 467
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS+ V+CGGD A L+ TTVE+VNDGK A+WH+H Y+Q + L +P +P LP+F
Sbjct: 468 NDTMQTSLSNVWCGGDLAGLAATTVEAVNDGKQASWHMHCYLQSLHGLYIPPEPSLPQFF 527
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+S+E GLKF NPFGLASA PTT+S+M+RRAFE GW FAVTKT++L KD++TN
Sbjct: 528 TPIDSVDVSIEFAGLKFENPFGLASATPTTSSAMIRRAFEAGWAFAVTKTYTLDKDIITN 587
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRIV+GTTS HL+GP Q ++LNIEL+SEKT
Sbjct: 588 VSPRIVRGTTSGHLFGPGQNAYLNIELVSEKT 619
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/258 (61%), Positives = 202/258 (78%), Gaps = 2/258 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IAS+MC ++K+DW L K +E+AGADALELNLSCPHGMGERGMGLACGQDPE+V I
Sbjct: 638 IVIASVMCGFSKEDWTILCKASEEAGADALELNLSCPHGMGERGMGLACGQDPELVVEIC 697
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIPFF K+TPN+T+I DIA+A+ EG A GV+AINTVSGLM + A+G PWPAVG
Sbjct: 698 CWVREAVKIPFFAKMTPNVTDIVDIARASQEGGATGVTAINTVSGLMGVKANGIPWPAVG 757
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ TTYGGVSGNA RP+ L+ VS+IA+ P FPIL GGIDSA+ LQF+ GA +Q+
Sbjct: 758 NENRTTYGGVSGNAIRPIALRDVSAIARALPGFPILAAGGIDSAEAGLQFLHCGATLLQV 817
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAY-QFRDKEGK 802
CSA+ NQ++T++DDY+TGL+ LLYL+S ++L WDGQ PPT HQKGK + + GK
Sbjct: 818 CSAIHNQEYTLIDDYVTGLKALLYLQSVSELGDWDGQCPPTAKHQKGKVITPKITEIIGK 877
Query: 803 AIPNFGEYKKIRENLITE 820
++P FG Y K ++ LI++
Sbjct: 878 SLPEFGPYLKEKDQLISD 895
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+++P FG Y K ++ LI++ S + P + + PV +VKDVIG+ +
Sbjct: 877 KSLPEFGPYLKEKDQLISDYKKSITPLTEFSPETHRPSYKPSKPVP---AVKDVIGRVLP 933
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + +LD K+Q VALI++DMCINCGKCYM CNDSGYQAITF +TH H+T++CTGCT
Sbjct: 934 MIGAWGDLDTKQQAVALIDEDMCINCGKCYMVCNDSGYQAITFDKDTHLPHITEDCTGCT 993
Query: 561 LCLSI 565
LC+S+
Sbjct: 994 LCVSV 998
>gi|27768991|gb|AAH42543.1| Dpyd protein, partial [Mus musculus]
Length = 879
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/393 (65%), Positives = 312/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLST ++T+ L+++GY A FIGIG P
Sbjct: 82 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSTDEMTLSSLKENGYRAAFIGIGLPE 141
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT+ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAF
Sbjct: 142 PKKDHIFQGLTQVQGFYTSKDFLPLVAKSSKTGMCA-CHS-PLPSIRGAVIVLGAGDTAF 199
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD KI
Sbjct: 200 DCATSALRCGALRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKDGKIVA 259
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G WVEDEEQ ++LKA+ +ISAFGS L D V EA+ P+K +++G PEVN
Sbjct: 260 MQFVRTEQDETGNWVEDEEQTVRLKADVVISAFGSVLEDPKVKEALSPIKFNRWGLPEVN 319
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHK+IQ + +VP +P +P F
Sbjct: 320 PETMQTSEPWVFAGGDVVGMANTTVESVNDGKQASWYIHKHIQAQYGTSVPSQPTMPLFY 379
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 380 TPVDLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTN 439
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 440 VSPRIIRGTTSGPLYGPGQSSFLNIELISEKTA 472
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 207/263 (78%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 489 NILIASIMCSYNKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 548
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 549 CRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 608
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G + TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 609 GIGRRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 668
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L WDGQSPP HQKGKP + + G+
Sbjct: 669 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELADWDGQSPPIISHQKGKPVPRVAELMGQ 728
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I +++
Sbjct: 729 KLPSFGPYLEQRKKIIAASKIRQ 751
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ +I +++ D + + L ++ N+ + I ++KDVIG+
Sbjct: 725 LMGQKLPSFGPYLEQRKKIIAASKIRQ--KDQNTACSPLQRKHFNSQ-KPIPAIKDVIGK 781
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + E+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 782 SLQYLGTFGEMSIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 841
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 842 GCTLCLSV 849
>gi|25140985|ref|NP_740748.1| dihydropyrimidine dehydrogenase [NADP(+)] [Mus musculus]
gi|81878130|sp|Q8CHR6.1|DPYD_MOUSE RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|24980778|gb|AAH39699.1| Dihydropyrimidine dehydrogenase [Mus musculus]
gi|148680406|gb|EDL12353.1| dihydropyrimidine dehydrogenase [Mus musculus]
Length = 1025
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/393 (65%), Positives = 312/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLST ++T+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSTDEMTLSSLKENGYRAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT+ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQVQGFYTSKDFLPLVAKSSKTGMCA-CH-SPLPSIRGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD KI
Sbjct: 346 DCATSALRCGALRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKDGKIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G WVEDEEQ ++LKA+ +ISAFGS L D V EA+ P+K +++G PEVN
Sbjct: 406 MQFVRTEQDETGNWVEDEEQTVRLKADVVISAFGSVLEDPKVKEALSPIKFNRWGLPEVN 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHK+IQ + +VP +P +P F
Sbjct: 466 PETMQTSEPWVFAGGDVVGMANTTVESVNDGKQASWYIHKHIQAQYGTSVPSQPTMPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPLYGPGQSSFLNIELISEKTA 618
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 207/263 (78%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NILIASIMCSYNKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G + TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIGRRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L WDGQSPP HQKGKP + + G+
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELADWDGQSPPIISHQKGKPVPRVAELMGQ 874
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I +++
Sbjct: 875 KLPSFGPYLEQRKKIIAASKIRQ 897
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ +I +++ D + + L ++ N+ + I ++KDVIG+
Sbjct: 871 LMGQKLPSFGPYLEQRKKIIAASKIRQ--KDQNTACSPLQRKHFNSQ-KPIPAIKDVIGK 927
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + E+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 928 SLQYLGTFGEMSIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 987
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 988 GCTLCLSV 995
>gi|13591940|ref|NP_112289.1| dihydropyrimidine dehydrogenase [NADP(+)] [Rattus norvegicus]
gi|81861573|sp|O89000.1|DPYD_RAT RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|3628593|dbj|BAA33218.1| dihydropyrimidine dehydrogenase [Rattus norvegicus]
Length = 1025
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 311/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +S+ST ++T+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSISTDEMTLSTLKENGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT+ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPGMCA-CH-SPLPSVRGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD KI G
Sbjct: 346 DCATSALRCGARRVFIVFRKGFANIRAVPEEMELAKEEKCEFLPFLSPRKVIVKDGKIVG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G WVEDEEQ ++LKA+ +IS FGS L D V+EA+ P+K +++G PEVN
Sbjct: 406 MQFVRTEQDETGNWVEDEEQIVRLKADVVISPFGSVLDDPKVIEALSPIKFNRWGLPEVN 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IH+YIQ + VP +P LP F
Sbjct: 466 PETMQTSEPWVFAGGDVVGMANTTVESVNDGKQASWYIHEYIQAQYGALVPSQPTLPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPLYGPGQSSFLNIELISEKTA 618
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 209/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR SV++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 695 CRWVRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGSPWPSV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G+ K TTYGGVSG RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GSGKRTTYGGVSGTTIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L WDGQSPPT HQKGKP + G+
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQSPPTMSHQKGKPVPHIAELMGQ 874
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ ++ +++
Sbjct: 875 KLPSFGPYLERRKKILAASKIRE 897
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 89/128 (69%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ ++ +++ +D + L ++ N+ + I ++KDVIG+
Sbjct: 871 LMGQKLPSFGPYLERRKKILAASKIRE--NDQNRACSPLQRKHFNSQ-KPIPAIKDVIGK 927
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + EL+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 928 SLQYLGTFGELNIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 987
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 988 GCTLCLSV 995
>gi|291244574|ref|XP_002742170.1| PREDICTED: dihydropyrimidine dehydrogenase-like [Saccoglossus
kowalevskii]
Length = 1025
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 313/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQ+RLPFD V+FEVE +KDLGVK+E + L ++++ L+++G +FIGIG P
Sbjct: 227 SSEIPQFRLPFDVVSFEVEQMKDLGVKVEFGKGLGINGMSLQSLKENGSKVVFIGIGMPQ 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+IPIF L + GFYTSK FLP VA +SK G+C CK SLP + G VIVLGAGDTAF
Sbjct: 287 PKLIPIFHDLAMKHGFYTSKHFLPLVAAASKAGMCS-CK-SSLPEIHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG T IRAVPEE++LA EEKCEF+PF++P +V VKD +I G
Sbjct: 345 DCATSALRCGARRVFVVFRKGFTTIRAVPEEMELAREEKCEFMPFVAPRKVLVKDGRITG 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++ RTEQ + G W EDEEQ ++LKA++IISAFGS+L D+ V A+ P+K +K+G P+VN
Sbjct: 405 LELCRTEQQDDGSWFEDEEQTVRLKADFIISAFGSSLTDDIVKSAMSPIKFNKWGLPDVN 464
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
+ TM TS VFCGGD A ++ TTVESVNDGK AAW+IH+Y+Q+ ++ +VP KP LPKF
Sbjct: 465 HDTMQTSEEWVFCGGDLAGVAQTTVESVNDGKQAAWYIHQYLQKLHSASVPSKPQLPKFY 524
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT S+M+RR FE GW FA+TKTFSL KD+VTN
Sbjct: 525 TPIDSVDISVEVCGLKFSNPFGLASAPPTTTSAMIRRGFEAGWSFALTKTFSLDKDIVTN 584
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS H+YGP QGSFLNIELISEKTA
Sbjct: 585 VSPRIVRGTTSGHVYGPGQGSFLNIELISEKTA 617
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/255 (67%), Positives = 208/255 (81%), Gaps = 1/255 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+I+SIMC+YNK+DW +L+K E +GADALELNLSCPHGMGERGMGLACGQD E+VRNI
Sbjct: 635 IIISSIMCSYNKEDWTKLAKMAEDSGADALELNLSCPHGMGERGMGLACGQDAELVRNIC 694
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF KLTPN+T+I IAKAAYEGKADGV+A NTVSGLM L ++G WPAVG
Sbjct: 695 RWVRAAVKIPFFAKLTPNVTDIVVIAKAAYEGKADGVTATNTVSGLMGLKSNGTAWPAVG 754
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+KLTTYGGVSGNA RP+ L+AVS+I + P FPIL GGIDSAD LQF+Q+GA +Q+
Sbjct: 755 KEKLTTYGGVSGNAIRPIALRAVSAIGRALPGFPILATGGIDSADAGLQFLQSGASLLQV 814
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
SAVQNQDFTV++DYITGL+TL+YLKS +L WDGQSPPT HQ GKP + + GK
Sbjct: 815 GSAVQNQDFTVIEDYITGLKTLMYLKSIDELSDWDGQSPPTLRHQLGKPVPKLNEIIGKG 874
Query: 804 IPNFGEYKKIRENLI 818
IPNFG Y++ R ++
Sbjct: 875 IPNFGPYREKRAEIV 889
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 86/127 (67%), Gaps = 6/127 (4%)
Query: 441 QAIPNFGEYKKIRENLIT--ELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ IPNFG Y++ R ++ + + L D Q P+R P ++I +VK++IG+A
Sbjct: 873 KGIPNFGPYREKRAEIVAANKATIDLLAED----QKPSPQRPPYQPKKSIPTVKEMIGRA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ ++ Y +LDN +Q VA+I+++MCINCGKCYM CNDSGYQAI F PETH + +CTG
Sbjct: 929 LSKIGAYGDLDNTQQYVAIIDEEMCINCGKCYMTCNDSGYQAIVFDPETHLPRINADCTG 988
Query: 559 CTLCLSI 565
CTLC+S+
Sbjct: 989 CTLCVSV 995
>gi|327270715|ref|XP_003220134.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Anolis
carolinensis]
Length = 1036
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 312/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D V+FE +L+KDLGVKI C RSLS +T+ L+KD Y A+FIGIG P
Sbjct: 239 TSEIPQFRLPYDVVHFETKLMKDLGVKIICGRSLSVEGLTLSALKKDDYQAVFIGIGLPE 298
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
P+FQGL + GFYTSK FLP VA +SK G+C C+ LP ++GTVIVLGAGDTAF
Sbjct: 299 PKREPVFQGLGMDEGFYTSKDFLPMVAMASKPGMCA-CR-SPLPSIQGTVIVLGAGDTAF 356
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE+ LA EEKCEFLPF+SP +V VK KIA
Sbjct: 357 DCATSALRCGARRVFVVFRKGFTNIRAVPEEMDLAKEEKCEFLPFLSPWKVIVKGGKIAA 416
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ E G W ED++Q ++LKAN +ISAFGS L D V EA+ P+K +K+G PEV+
Sbjct: 417 MEFVRTEQGEDGNWKEDQDQVVRLKANVVISAFGSILNDPKVKEALSPLKFNKWGLPEVD 476
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P +F GGD + L++TTVESVNDGK A+W++HKYIQ ++ VPD P LP F
Sbjct: 477 LETMQTSEPWIFAGGDISGLANTTVESVNDGKQASWYMHKYIQSLYDVVVPDVPQLPLFY 536
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKFPNPFGLASA PTT+S M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 537 TPIDLVDISVEMAGLKFPNPFGLASATPTTSSPMIRRAFEAGWGFALTKTFSLDKDIVTN 596
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP QGSFLNIELISEKTA
Sbjct: 597 VSPRIIRGTTSGPIYGPGQGSFLNIELISEKTA 629
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 206/267 (77%), Gaps = 1/267 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+YNK+DW +LSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 647 ILIASIMCSYNKEDWTQLSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 706
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFF KLTPN+T+I IA+A+ EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 707 RWVRQAVQIPFFAKLTPNVTDIVSIARASQEGGADGVTATNTVSGLMGLRADGIPWPAVG 766
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSGNA RP+ L+AVS+IA P FP+L GGIDSA+ LQF+ GA +Q+
Sbjct: 767 RGDKTTYGGVSGNAIRPIALRAVSAIAHALPGFPVLATGGIDSAESGLQFLHCGASVLQV 826
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSPPT HQKGKP D GK
Sbjct: 827 CSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPPTIRHQKGKPVPSVADLVGKT 886
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDG 830
+P+FG Y + R+ +I E LK G
Sbjct: 887 LPSFGPYLEQRKKIIAENKLKLKEESG 913
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 86/129 (66%), Gaps = 11/129 (8%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINT----PVETILSVKDVIG 496
+ +P+FG Y + R+ +I E LK G P Q+ T P + IL+VKD+IG
Sbjct: 885 KTLPSFGPYLEQRKKIIAENKLKLKEESG-------PFSQVETKHFIPKKPILTVKDIIG 937
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDEC 556
+A++ + Y EL N +QVVALI+++MCINCGKCYM CNDSGYQAI F PE H VTD C
Sbjct: 938 KALRYIGTYGELSNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPEIHLPTVTDSC 997
Query: 557 TGCTLCLSI 565
TGCTLCLS+
Sbjct: 998 TGCTLCLSV 1006
>gi|194500464|gb|ACF75488.1| dihydrogenpyrimidine dehydrogenase [Adineta vaga]
Length = 835
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/408 (62%), Positives = 323/408 (79%), Gaps = 7/408 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRD--ITIEKLRKD-GYTAIFIGIG 97
S+EIPQYRLP+DAVNFEV+L+KDLGVKI ++L+ +TI+ LR++ GY AIF+GIG
Sbjct: 236 SAEIPQYRLPYDAVNFEVQLMKDLGVKIVPNKALTVEKDGLTIKTLREEHGYKAIFLGIG 295
Query: 98 KPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGD 157
PN N+ PIFQ LT+ GF+TSK FLP V+ SSK G+C CK +LP+L G V+VLGAGD
Sbjct: 296 LPNPNIDPIFQNLTKAEGFFTSKNFLPLVSKSSKAGMCA-CK-SALPVLSGNVVVLGAGD 353
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TA DCATSA+RCGA KV V FRKG +RAVPEEV +A EE+CEF+PF SP +V VK+ K
Sbjct: 354 TAMDCATSAIRCGATKVFVCFRKGFNQMRAVPEEVDVAIEERCEFIPFCSPREVFVKNGK 413
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
I +QF +TEQ + G+W+EDE+Q I+LK NY+ISAFGSTL + V++A++P+ LDKY YP
Sbjct: 414 ITSVQFVKTEQTQSGDWIEDEDQIIRLKCNYVISAFGSTLNELPVIQAMEPILLDKYNYP 473
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
V+ T M+TS PGVFCGGD A ++ TTVESVNDGKTAAWHIH+Y+Q ++ +P +P LP
Sbjct: 474 VVDLTKMSTSEPGVFCGGDLAKIASTTVESVNDGKTAAWHIHRYLQGED--IIPLEPRLP 531
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDM 397
KF + ID VD+S+EICGLKFPNPFGLASAPP T+ M+RR FE+GWGF VTKTFSL+KD+
Sbjct: 532 KFYTPIDKVDVSIEICGLKFPNPFGLASAPPVTSGPMIRRCFESGWGFVVTKTFSLEKDL 591
Query: 398 VTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN 445
+TNVSPR+ +GTTS H+YGP QGSF+NIELISEKT + + + N
Sbjct: 592 ITNVSPRMARGTTSGHIYGPGQGSFINIELISEKTCAYWLQCIKELKN 639
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 157/191 (82%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++++ DW EL+K TE AGADALELNLSCPHGMGE+GMGLACGQ ++V NI
Sbjct: 645 IIIASIMCSFDEQDWTELAKVTEAAGADALELNLSCPHGMGEKGMGLACGQKADLVLNIC 704
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF K+TPNITNI DIA+AA EG ADGV+A NTVSGLMS+ D WP+VG
Sbjct: 705 KWVRAAVKIPFFAKMTPNITNIVDIARAAKEGGADGVTATNTVSGLMSIRHDTTAWPSVG 764
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ TTYGGVSGNA RP+ L+AVS+I + P FPIL GGIDSAD +QF+ AGA A+Q+
Sbjct: 765 KSQNTTYGGVSGNAIRPIALRAVSAIGRALPGFPILATGGIDSADAGIQFLYAGASALQV 824
Query: 745 CSAVQNQDFTV 755
CSAVQNQDFT+
Sbjct: 825 CSAVQNQDFTL 835
>gi|417405617|gb|JAA49516.1| Putative dihydropyrimidine dehydrogenase [Desmodus rotundus]
Length = 1025
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/393 (66%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQ+RLPFD VNFEVEL+KDLGVKI C +SLS ++T++ L+ +GY A FIGIG P
Sbjct: 228 SSEIPQFRLPFDVVNFEVELMKDLGVKIICGKSLSVNEMTLQSLKAEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N PIF+GLT E GFYTSK FLP VA +SK G+C C LP ++GT IVLGAGDTAF
Sbjct: 288 PNKDPIFEGLTREQGFYTSKDFLPLVAKASKAGMCA-CHS-PLPSIRGTAIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFVVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G W EDE+QR++LKA+ +ISAFGS L D V EA+ P++ +K+G PEV+
Sbjct: 406 MQFVRTEQDEAGNWSEDEDQRVQLKADVVISAFGSVLHDPAVKEALSPIRFNKWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W IHKYIQ + VP P LP F
Sbjct: 466 PETMQTSEPWVFAGGDLVGMANTTVESVNDGKQASWFIHKYIQAQYGAAVPAWPELPLFH 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVD+SVE+ GLKF NPFGLASA P+T+++M+RRAFE GW FA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDLSVEVAGLKFANPFGLASATPSTSAAMIRRAFEAGWAFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS LYGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGPLYGPGQSSFLNIELISEKTA 618
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 208/267 (77%), Gaps = 1/267 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
++LIAS+MC+YNK DW+ELS+ E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NVLIASLMCSYNKSDWMELSRMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLRADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GAGKRTTYGGVSGTAIRPVALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQD TV+DDY +GL+ LLYLKS +L+ WDGQSP T HQKGKP Q + GK
Sbjct: 815 VCSAVQNQDLTVIDDYCSGLRALLYLKSIEELRDWDGQSPVTVSHQKGKPVPQIAELTGK 874
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
+P+FG Y + R+ +I E +K D
Sbjct: 875 KLPSFGPYLEQRKKIIAEHKIKLREED 901
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 83/125 (66%), Gaps = 7/125 (5%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVIGQAVQ 500
+P+FG Y + R+ +I E +K D P +RQ+ P + I ++KDVIG+A+
Sbjct: 876 LPSFGPYLEQRKKIIAEHKIKLREED-----TAFPPLERQLFLPQKPIPTIKDVIGRALP 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + +L +Q VA+I+++MCINCGKCYM CNDSGYQAI F PETH V++ CTGCT
Sbjct: 931 HLGAFGDLSTVEQAVAMIDEEMCINCGKCYMTCNDSGYQAIRFDPETHLPSVSESCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|187936058|gb|ACD37553.1| dihydrogenpyrimidine dehydrogenase [Adineta vaga]
Length = 968
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/408 (62%), Positives = 323/408 (79%), Gaps = 7/408 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRD--ITIEKLRKD-GYTAIFIGIG 97
S+EIPQYRLP+DAVNFEV+L+KDLGVKI ++L+ +T++ LR++ GY AIF+GIG
Sbjct: 236 SAEIPQYRLPYDAVNFEVQLMKDLGVKIIPNKALTVEKDGLTVKTLREEHGYKAIFLGIG 295
Query: 98 KPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGD 157
PN N+ PIFQ LT+ GF+TSK FLP V+ SSK G+C CK +LP+L G V+VLGAGD
Sbjct: 296 LPNPNIDPIFQNLTKAEGFFTSKNFLPLVSKSSKAGMCA-CK-SALPVLSGNVVVLGAGD 353
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TA DCATSA+RCGA KV V FRKG +RAVPEEV +A EE+CEF+PF SP +V VK+ K
Sbjct: 354 TAMDCATSAIRCGATKVFVCFRKGFNQMRAVPEEVDVAIEERCEFIPFCSPREVFVKNGK 413
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
I +QF +TEQ + G+W+EDE+Q I+LK NY+ISAFGSTL + V++A++P+ LDKY YP
Sbjct: 414 ITSIQFVKTEQTQSGDWIEDEDQIIRLKCNYVISAFGSTLNELPVIQAMEPILLDKYNYP 473
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
V+ T M+TS PGVFCGGD A ++ TTVESVNDGKTAAWHIH+Y+Q ++ +P +P LP
Sbjct: 474 VVDLTKMSTSEPGVFCGGDLAKIASTTVESVNDGKTAAWHIHRYLQGED--IIPLEPRLP 531
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDM 397
KF + ID VD+S+EICGLKFPNPFGLASAPP T+ M+RR FE+GWGF VTKTFSL+KD+
Sbjct: 532 KFYTPIDKVDVSIEICGLKFPNPFGLASAPPVTSGPMIRRCFESGWGFVVTKTFSLEKDL 591
Query: 398 VTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN 445
+TNVSPR+ +GTTS H+YGP QGSF+NIELISEKT + + + N
Sbjct: 592 ITNVSPRMARGTTSGHIYGPGQGSFINIELISEKTCAYWLQCIKELKN 639
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/257 (67%), Positives = 205/257 (79%), Gaps = 1/257 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++++ DW EL+K TE AGADALELNLSCPHGMGE+GMGLACGQ ++V NI
Sbjct: 645 IIIASIMCSFDEQDWTELAKVTEAAGADALELNLSCPHGMGEKGMGLACGQKADLVLNIC 704
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF K+TPNITNI DIA+AA EG ADGV+A NTVSGLMS+ D WP+VG
Sbjct: 705 KWVRAAVKIPFFAKMTPNITNIVDIARAAKEGGADGVTATNTVSGLMSIRHDTTAWPSVG 764
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNA RP+ L+AVS+I + P FPIL GGIDSAD +QF+ AGA A+Q+
Sbjct: 765 KSKNTTYGGVSGNAIRPIALRAVSAIGRALPGFPILATGGIDSADAGIQFLYAGASALQV 824
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAI 804
CSAVQNQDFT++DDYITGLQ LLYLKS L+GWDGQSPPTP HQKGK A +D G +
Sbjct: 825 CSAVQNQDFTLIDDYITGLQALLYLKSLGLEGWDGQSPPTPKHQKGK-AILVKDLIGSHL 883
Query: 805 PNFGEYKKIRENLITEL 821
P FGEY+K RE + +
Sbjct: 884 PVFGEYRKKREEITQQF 900
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 443 IPNFGEYKKIRENLITEL-NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQR 501
+P FGEY+K RE + + N L ++ + P R+ P TI + DV G A+ +
Sbjct: 883 LPVFGEYRKKREEITQQFFNEVDLLNEQFQPEQVRPARE---PQTTIPRLVDVRGTALDK 939
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCY 530
+T++ +LD ++ VA+I+DD+C+NCGKCY
Sbjct: 940 ITDFKQLDPRQPAVAIIDDDLCVNCGKCY 968
>gi|147899974|ref|NP_001087488.1| dihydropyrimidine dehydrogenase [Xenopus laevis]
gi|51258279|gb|AAH80003.1| MGC81821 protein [Xenopus laevis]
Length = 940
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 316/393 (80%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D V+FE+EL+KDLGVK+ + L + I L+++G+ AIFIGIG P
Sbjct: 228 TSEIPQFRLPYDVVSFEIELMKDLGVKVIEGKGLGMNGMNIRSLKEEGFKAIFIGIGLPQ 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ +F GLT E GFYTSK FLP V+ +SK+G+C C LP +KG VIVLGAGDTAF
Sbjct: 288 PKIDDVFTGLTIEHGFYTSKDFLPLVSKASKQGMCA-CH-SPLPSIKGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEEV+LA EEKCEFLPF+SP +V +K KI+G
Sbjct: 346 DCATSALRCGARRVFVVFRKGFTNIRAVPEEVELAKEEKCEFLPFLSPRKVTLKGGKISG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ++ G W+EDE+Q+I+LKA +ISAFGS L D+ VLEA+ P+K +++G PE +
Sbjct: 406 MEFVRTEQDDDGNWIEDEDQKIQLKAEVVISAFGSVLTDSAVLEAMIPIKFNRWGLPEAD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS GVF GGD A L++TTVESVNDGK A+WH+HKYIQ + +++ +KP LP F
Sbjct: 466 PETMQTSEAGVFVGGDIAGLANTTVESVNDGKQASWHMHKYIQSLHGVSINNKPELPLFN 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASAPPTT++ M+RRAFE GWGFA+TKTFSL+KD+VTN
Sbjct: 526 TPIDLVDISVEMVGLKFLNPFGLASAPPTTSAPMIRRAFEAGWGFALTKTFSLEKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP QGSFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGSIYGPGQGSFLNIELISEKTA 618
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 170/265 (64%), Positives = 206/265 (77%), Gaps = 1/265 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC+YNKDDW ELS E +GA+ALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 636 IIIASIMCSYNKDDWTELSLMAEASGANALELNLSCPHGMGERGMGLACGQDPELVRNIC 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIPFF KLTPN+T++ IA AA EG ADGV+A NTVSGLM L AD PWPAVG
Sbjct: 696 RWVRQAVKIPFFAKLTPNVTDVVKIAMAAQEGGADGVTATNTVSGLMGLKADATPWPAVG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 756 SGSRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTV++DY TGL+ LLYLKS +L+ WDGQSPPT HQKGKP + +
Sbjct: 816 CSAVQNQDFTVIEDYCTGLKALLYLKSIDELQDWDGQSPPTIRHQKGKPVPTIAEIKETK 875
Query: 804 IPNFGEYKKIRENLITELNLKKLNS 828
+P+FG + + R+ ++ E + +L S
Sbjct: 876 LPSFGPFLEKRKRILAENKMNELTS 900
>gi|58376848|ref|XP_309214.2| AGAP001021-PA [Anopheles gambiae str. PEST]
gi|347964950|ref|XP_003437170.1| AGAP001021-PB [Anopheles gambiae str. PEST]
gi|55245087|gb|EAA04946.2| AGAP001021-PA [Anopheles gambiae str. PEST]
gi|333466553|gb|EGK96290.1| AGAP001021-PB [Anopheles gambiae str. PEST]
Length = 1039
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/391 (64%), Positives = 310/391 (79%), Gaps = 3/391 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP + VNFEV+LVKDLGV+ E R+LS +D+T+ L G A+F+GIG P
Sbjct: 227 SAEIPQYRLPVEVVNFEVDLVKDLGVRFELNRALSAQDLTVRGLLDGGVDAVFLGIGLPQ 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
V +F+GLTEE GFYTSK+FLP+VA SK GLCG + LP L G VIVLGAGDTAF
Sbjct: 287 PKVDRVFEGLTEEHGFYTSKSFLPQVADGSKPGLCGCKQSAKLPTLNGNVIVLGAGDTAF 346
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFRKG NIRAVPEEV+LA EE+CEF+PFM+P +V V+ +IA
Sbjct: 347 DCATSALRCGARKVFVVFRKGNNNIRAVPEEVELAREERCEFIPFMAPREVIVRAGRIAA 406
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ+E G WVED++Q +LKANYIISAFGS L D D++ A+ +K++++G PEV+
Sbjct: 407 MEFYRTEQDETGNWVEDQDQITRLKANYIISAFGSGLYDADIISALDGLKMNRWGLPEVD 466
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
T TS+P VFCGGD A ++TTVESVNDGKTAAW++H Y+Q + + KP LP F
Sbjct: 467 PKTQQTSLPAVFCGGDLAGAAETTVESVNDGKTAAWYMHCYLQ---GIPLDTKPELPLFY 523
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGFAVTKTF+L KDMVTN
Sbjct: 524 TEIDKVDLSVEVCGVRFENPFGLASAPPTTSTAMIRRAFEQGWGFAVTKTFALDKDMVTN 583
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEK 431
VSPRIV+G T+ YGP+QG+FLNIELISEK
Sbjct: 584 VSPRIVRGVTAGQHYGPQQGAFLNIELISEK 614
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/263 (66%), Positives = 209/263 (79%), Gaps = 3/263 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIMCTY++ DW+EL+ + E AGAD LELNLSCPHGMGE GMGLACGQDPE+V NIS
Sbjct: 634 VLIASIMCTYSEPDWIELASRAEAAGADMLELNLSCPHGMGESGMGLACGQDPELVYNIS 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFFVKLTPNIT+I IA+AA G+ADGVSAINTV GLMSL ADG+PWPAVG
Sbjct: 694 RWVRGAVRIPFFVKLTPNITDIVSIAQAAKRGQADGVSAINTVQGLMSLRADGSPWPAVG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ TTYGGVSGNATRP ++A+S IA P FPI GIGGIDSA+VALQFIQ GA +QI
Sbjct: 754 ADRRTTYGGVSGNATRPQAMRAISLIANKLPGFPICGIGGIDSAEVALQFIQCGAPILQI 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST---QLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
CS+VQNQDFTV++DYI GL+ LLYL++ + WDGQSPP QKGKP R ++G
Sbjct: 814 CSSVQNQDFTVIEDYILGLKALLYLRANPPPEALPWDGQSPPAAKLQKGKPVAPLRGEDG 873
Query: 802 KAIPNFGEYKKIRENLITELNLK 824
K + +FGEYKK RE + +L L+
Sbjct: 874 KPLLHFGEYKKQREEKLAQLRLQ 896
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
Query: 445 NFGEYKKIRENLITELNLKKLN-SDGVSLQNG----LPKRQINTPVETILSVKDVIGQAV 499
+FGEYKK RE + +L L+ D + + G P R + + VKDV+G A+
Sbjct: 878 HFGEYKKQREEKLAQLRLQHGPLWDPCAAEPGTNGHAPVRTESATPAAVPRVKDVLGGAL 937
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGC 559
R+ +Y +LDN KQVVALI+DD+CINCGKCYM C DSGYQAI F TH HV D+CTGC
Sbjct: 938 PRIGDYKKLDNTKQVVALIDDDLCINCGKCYMTCADSGYQAIEFDSVTHLPHVNDDCTGC 997
Query: 560 TLCLSI 565
LCLS+
Sbjct: 998 NLCLSV 1003
>gi|395535413|ref|XP_003769720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Sarcophilus
harrisii]
Length = 1025
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 311/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVK+ C + LS + + L+++GY A+FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKVICGKGLSVNGMNLHTLKEEGYKAVFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT + GFYTSK FLP VA +SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDSIFQGLTMDQGFYTSKDFLPLVAKASKAGMCA-CH-SPLPSIQGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG NIRAVPEE+++A EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFVVFRKGFVNIRAVPEEMEIAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G W EDE+Q ++LKA+ +ISAFGS L D V EA+ P+K +++G PE++
Sbjct: 406 MQFVRTEQDETGNWKEDEDQVVQLKADVVISAFGSVLSDPTVKEAMDPIKFNRWGLPEID 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD A L++TTVESVNDGK A+W++HKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDIAGLANTTVESVNDGKQASWYMHKYIQSQYGASVSPKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKFPNPFGLASAPP+T++SM+RRAFE GWGFAVTKTFSL KD+VTN
Sbjct: 526 TSIDLVDISVEMAGLKFPNPFGLASAPPSTSASMIRRAFEAGWGFAVTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPVYGPGQSSFLNIELISEKTA 618
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 208/271 (76%), Gaps = 2/271 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIAS+MCTYNK+DW ELSK E AGADALELNLSC HGMGERGMGLACGQDP++VRNI
Sbjct: 635 NILIASLMCTYNKNDWAELSKMAEAAGADALELNLSCSHGMGERGMGLACGQDPDIVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
W+R +V+IPFF KLTPNIT+I +A+AA EG A+GV+A NTV GLM L AD PWPA+
Sbjct: 695 CRWIRQAVRIPFFAKLTPNITDIVSVARAAQEGGANGVTATNTVLGLMGLRADATPWPAI 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYG VSG A RP+ L+AV++IAK P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GVGKRTTYGSVSGTAVRPIALRAVAAIAKALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV+ DY TGL+ LLYLKS +LK WDGQSP T HQKGKP + D GK
Sbjct: 815 VCSAIQNQDFTVIKDYCTGLKALLYLKSIEELKDWDGQSPATVRHQKGKPVPRIADLTGK 874
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSDGVSL 833
+PNFG Y ++R+ ++ E N KL V+L
Sbjct: 875 KLPNFGPYLELRKKILAE-NKMKLKEQNVAL 904
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +PNFG Y ++R+ ++ E N KL V+L ++ P + I +KD+IG+A+Q
Sbjct: 874 KKLPNFGPYLELRKKILAE-NKMKLKEQNVALSP--LEKSYYVPKKPIPKIKDIIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y EL +QVVALI+++MCINCGKCYM CNDSGYQAI F P TH V D CTGCT
Sbjct: 931 YIGTYGELSKIEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPSTHLPTVNDSCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|260821394|ref|XP_002606018.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae]
gi|229291355|gb|EEN62028.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae]
Length = 1044
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/394 (64%), Positives = 313/394 (79%), Gaps = 3/394 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRD-ITIEKLRKDGYTAIFIGIGKP 99
SSEIPQ+RLP+ V FEV+ +KDLGVKI C ++L T++ L++ GY A+F+GIG P
Sbjct: 232 SSEIPQFRLPYSVVAFEVDQMKDLGVKIVCGKALGGEGGWTLQSLKEAGYEAVFLGIGLP 291
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159
A +FQGLT E GFYTSK +LP V+ +SK G+C CK + LP L G VIVLGAGDTA
Sbjct: 292 QAKRASMFQGLTVEQGFYTSKDYLPLVSAASKPGMCS-CKSQ-LPQLSGNVIVLGAGDTA 349
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
FDCATSALRCGA +V +VFRKG T IRAVPEE++LA EEKCEF+PF SP +V +K+ +IA
Sbjct: 350 FDCATSALRCGARRVFIVFRKGFTTIRAVPEEMELAREEKCEFMPFHSPRKVVLKNGRIA 409
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
GM+F RTEQ + G W DE+Q +KLKA+YIISAFGSTL + V+ A+ PVKL+++G PEV
Sbjct: 410 GMEFCRTEQADDGTWHVDEDQVVKLKADYIISAFGSTLSEPQVVSALSPVKLNQWGLPEV 469
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
+ TM TS P VFCGGD A ++ TTVE VNDGK A+WH+HKY+Q + L VP +P LPKF
Sbjct: 470 DTETMQTSEPWVFCGGDLAGVAQTTVECVNDGKQASWHLHKYLQSLHGLFVPSEPALPKF 529
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VD+SVE+CG++FPNPFGLASAPPTT++ M+RRAFE GWGFA+TKTF+L KD+VT
Sbjct: 530 YTPIDQVDLSVEVCGIRFPNPFGLASAPPTTSAPMIRRAFEVGWGFALTKTFALDKDIVT 589
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIVKGTTS + YGP QGSFLNIELISEKTA
Sbjct: 590 NVSPRIVKGTTSGYHYGPGQGSFLNIELISEKTA 623
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 206/257 (80%), Gaps = 2/257 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC+YNKDDW+EL++ EKAG+DALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 641 IVIASIMCSYNKDDWIELAQMAEKAGSDALELNLSCPHGMGERGMGLACGQDPELVRNIC 700
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVRS++KIPFF K+TPNIT++T IA+AA EG ADGV+A NTVSGLM L ++ WPAVG
Sbjct: 701 RWVRSAIKIPFFAKMTPNITDVTVIAQAAKEGMADGVTATNTVSGLMGLKSNARAWPAVG 760
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ GA +Q+
Sbjct: 761 QEMRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAEAGLQFLHCGASVLQV 820
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTVV+DYITGL+ +LYL+S L WDGQSPPT HQKGKP + D GK
Sbjct: 821 CSAIQNQDFTVVEDYITGLKAMLYLQSLDDLADWDGQSPPTFRHQKGKPV-KVADVIGKH 879
Query: 804 IPNFGEYKKIRENLITE 820
+P+FG Y RE +I +
Sbjct: 880 LPSFGPYMAQREEIIAK 896
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQN-GLPKRQINTPVETILSVKDVIGQAVQR 501
+P+FG Y RE +I + S+ ++ QN P+R P + + S++DVIG+A+
Sbjct: 880 LPSFGPYMAQREEIIAK---HHETSEILAEQNMPQPQRPARVPDKPVPSLQDVIGRALST 936
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+T+Y++LDNK+Q VALI+++MCINCGKCYM CNDSGYQAITF ETH HVTD+CTGCTL
Sbjct: 937 ITSYSQLDNKQQAVALIDEEMCINCGKCYMTCNDSGYQAITFDAETHLPHVTDDCTGCTL 996
Query: 562 CLSI 565
C+S+
Sbjct: 997 CVSV 1000
>gi|198434443|ref|XP_002130803.1| PREDICTED: similar to Dihydropyrimidine dehydrogenase [Ciona
intestinalis]
Length = 1030
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/394 (62%), Positives = 314/394 (79%), Gaps = 3/394 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D V+FEV+L++DLGVK++ + L + +E L+KDG+ A+F+GIG P
Sbjct: 229 TSEIPQFRLPYDVVHFEVQLMQDLGVKVKLGKGLGDDGMDLESLKKDGFAAVFVGIGNPE 288
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTA 159
IP F+ LT++ GFYTSK FLP VA +SK G+C C +LP ++ VIVLGAGDTA
Sbjct: 289 PKRIPAFKELTQDQGFYTSKGFLPLVARASKPGMCN-CSTSTLPNMRNAKVIVLGAGDTA 347
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDV-KDNKI 218
FDCATSALRCGA +V VVFRKG ++RAVPEE+ LA EEKCE +PF SP++V+V +I
Sbjct: 348 FDCATSALRCGAKRVFVVFRKGFNHVRAVPEEMDLAREEKCELMPFHSPLEVEVGAGGRI 407
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
GM+F RTEQ E G W ED+EQ ++LKA+Y+ISAFGSTL D V A+ PVK +K+G+PE
Sbjct: 408 TGMRFCRTEQEEDGSWTEDKEQIVRLKADYVISAFGSTLSDEKVKSALSPVKFNKWGFPE 467
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPK 338
V+ +T +S P VF GGD A +++TTVESVNDGKTA+W +H+Y+Q LT+P +P LPK
Sbjct: 468 VDPSTGGSSEPWVFFGGDVAGVANTTVESVNDGKTASWFVHRYLQSLGGLTLPHEPALPK 527
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + ID VD+S+E+CGLKFPNPFGLASAPPTT S+M+RRAFE GWGFA+TKT+SLQKD+V
Sbjct: 528 FFTPIDAVDVSIEVCGLKFPNPFGLASAPPTTTSAMIRRAFEAGWGFALTKTYSLQKDIV 587
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
TNVSPRIV+GTTS H++GP QGSFLNIELISEKT
Sbjct: 588 TNVSPRIVRGTTSGHMFGPGQGSFLNIELISEKT 621
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 166/277 (59%), Positives = 212/277 (76%), Gaps = 4/277 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC +N++DW EL+K +E AGADALELNLSCPHGMGERGMGLACGQDP++V I
Sbjct: 640 IVIASIMCAFNRNDWTELAKMSEDAGADALELNLSCPHGMGERGMGLACGQDPKLVIEIC 699
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF KLTPN+TNI IA+AA +G ADGV+A NTVSGLM L D WPA+G
Sbjct: 700 KWVRAAVKIPFFAKLTPNVTNIVTIAEAAKDGGADGVTATNTVSGLMGLRGDSTAWPAIG 759
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ TTYGGVSGNA RP+ LKAVS+I++ FP FP+L GGIDSA+ LQ++ AGA +Q+
Sbjct: 760 KQHRTTYGGVSGNAIRPIALKAVSAISRAFPGFPVLATGGIDSAEAGLQYLHAGASVLQV 819
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFT++DDY++GL+TLLY++S ++K WDGQS PTP HQ GK + D GK
Sbjct: 820 CSAVQNQDFTLIDDYLSGLKTLLYMRSLNEVKNWDGQSQPTPSHQLGKRVIKLADVIGKD 879
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPRQ 840
+PNFG Y+ R + ++ K+ ++ V+ P+Q
Sbjct: 880 LPNFGPYRNERAAIAAKI---KIETNLVAEHAAPPKQ 913
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPK-RQINTPVETILSVKDVIGQAVQR 501
+PNFG Y+ R + ++ K+ ++ V+ PK R I P + I +V+DV+G A+ +
Sbjct: 880 LPNFGPYRNERAAIAAKI---KIETNLVAEHAAPPKQRPIYVPTKPIPTVRDVVGAALPQ 936
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+ Y +LDNK+QV ALI+ +MCINCGKCYMACNDSGYQAITF P TH V D CTGCTL
Sbjct: 937 IGTYGDLDNKQQVQALIDPEMCINCGKCYMACNDSGYQAITFDPVTHLPMVQDTCTGCTL 996
Query: 562 CLSI 565
CLS+
Sbjct: 997 CLSV 1000
>gi|351700457|gb|EHB03376.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Heterocephalus
glaber]
Length = 863
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLG+KI C SLS ++T+ L++DGY A FIGIG P
Sbjct: 217 TSEIPQFRLPYDVVNFEIELMKDLGIKINCGNSLSVHEMTLSTLKEDGYKAAFIGIGLPE 276
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
PIFQGLT++ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAF
Sbjct: 277 PKRDPIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CH-SPLPSIRGAVIVLGAGDTAF 334
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V +K +I
Sbjct: 335 DCATSALRCGARRVSIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPKKVIIKGGRIVA 394
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 395 MQFIRTEQDETGKWNEDEDQIVCLKADVVISAFGSVLSDPTVKEALSPIKFNRWNLPEVD 454
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+WHIHKYIQ + +V KP LP F
Sbjct: 455 TETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWHIHKYIQSQYGASVSAKPELPLFY 514
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE+GWGFA+TKTFSL KD+VTN
Sbjct: 515 TPIDLVDISVEMAGLKFMNPFGLASATPATSTSMIRRAFEDGWGFALTKTFSLDKDIVTN 574
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPR+++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 575 VSPRVIRGTTSGPMYGPGQSSFLNIELISEKTA 607
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 193/240 (80%), Gaps = 1/240 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 624 NIVIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 683
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 684 CRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 743
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGI+SA+ LQF+ GA +Q
Sbjct: 744 GIGKQTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGINSAESGLQFLHGGASVLQ 803
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + GK
Sbjct: 804 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPPIAELTGK 863
>gi|402855350|ref|XP_003892289.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial
[Papio anubis]
Length = 776
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 308/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 130 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 189
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT + GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 190 PNKDAIFQGLTPDQGFYTSKDFLPLVAKGSKAGMCA-CHS-PLPSIRGVVIVLGAGDTAF 247
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +IA
Sbjct: 248 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIAA 307
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 308 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 367
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ + ++ KP LP F
Sbjct: 368 PETMQTSEPWVFAGGDVIGLANTTVESVNDGKQASWYIHKYIQSQYGASISAKPELPLFY 427
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 428 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 487
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 488 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 520
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 162/230 (70%), Positives = 193/230 (83%), Gaps = 1/230 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 537 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 596
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 597 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 656
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 657 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 716
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKP 792
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP
Sbjct: 717 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKP 766
>gi|355745468|gb|EHH50093.1| hypothetical protein EGM_00862, partial [Macaca fascicularis]
Length = 762
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 215 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 274
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N +FQGLT + GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 275 PNKDAMFQGLTRDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 332
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +IAG
Sbjct: 333 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIAG 392
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 393 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 452
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ + ++ KP LP F
Sbjct: 453 PETMQTSEPWVFAGGDVIGLANTTVESVNDGKQASWYIHKYIQSQYGASISAKPELPLFY 512
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 513 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 572
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 573 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 605
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/133 (75%), Positives = 117/133 (87%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 622 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 681
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 682 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 741
Query: 684 GTKKLTTYGGVSG 696
G K TTYGGVSG
Sbjct: 742 GIAKRTTYGGVSG 754
>gi|109011616|ref|XP_001106007.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Macaca mulatta]
Length = 1025
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N +FQGLT + GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAMFQGLTRDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +IAG
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIAG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ + ++ KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDVIGLANTTVESVNDGKQASWYIHKYIQSQYGASISAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 173/268 (64%), Positives = 214/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG Y + R+ +I E + LK+ N+
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQNA 902
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E + LK+ N+ L KR P + +VKDVIG+A
Sbjct: 874 KKLPSFGPYLEQRKKIIAENKIRLKEQNAAFSPL-----KRNCFIPKWPVPTVKDVIGKA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTG
Sbjct: 929 LQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIRFDPETHLPTITDTCTG 988
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 989 CTLCLSV 995
>gi|355558194|gb|EHH14974.1| hypothetical protein EGK_00997 [Macaca mulatta]
Length = 1025
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N +FQGLT + GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAMFQGLTRDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +IAG
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIAG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ + ++ KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDVIGLANTTVESVNDGKQASWYIHKYIQSQYGASISAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 214/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG Y + R+ +I E + LK+ N+
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQNA 902
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E + LK+ N+ L KR P + +VKDVIG+A
Sbjct: 874 KKLPSFGPYLEQRKKIIAENKIRLKEQNAAFSPL-----KRNCFIPKWPVPTVKDVIGKA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTG
Sbjct: 929 LQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIRFDPETHLPTITDTCTG 988
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 989 CTLCLSV 995
>gi|440912381|gb|ELR61952.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Bos grunniens
mutus]
Length = 845
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLG+KI C +SLS DIT+ L+++GY A FIGIG P
Sbjct: 151 TSEIPQFRLPYDVVNFEIELMKDLGIKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPE 210
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C L I +GTVIVLGAGDTAF
Sbjct: 211 PKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CHSPLLSI-RGTVIVLGAGDTAF 268
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD +I
Sbjct: 269 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAREEKCEFLPFLSPRKVIVKDGRIVA 328
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 329 MQFVRTEQDETGKWNEDEDQIVSLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVD 388
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVE+VNDGK A+W+IH+YIQ + +V KP LP F
Sbjct: 389 PETMQTSEPWVFAGGDVVGIANTTVEAVNDGKQASWYIHRYIQSQYGASVSAKPELPLFY 448
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GW FA+TKTFSL KD+VTN
Sbjct: 449 TPIDLVDISVEMAGLKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTN 508
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 509 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 541
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN++DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 558 NIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 617
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 618 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 677
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ GA +Q
Sbjct: 678 GREKRTTYGGVSGTAIRPIALRAVTTIARALPEFPILATGGIDSAESGLQFLHGGASVLQ 737
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFT++ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + GK
Sbjct: 738 VCSAIQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQSPATRSHQKGKPVPCIAELVGK 797
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E L LKK N
Sbjct: 798 KLPSFGPYLEKRKKIIAEEKLRLKKEN 824
>gi|157103945|ref|XP_001648193.1| dihydropyrimidine dehydrogenase [Aedes aegypti]
gi|108869301|gb|EAT33526.1| AAEL014199-PA [Aedes aegypti]
Length = 1037
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/396 (63%), Positives = 311/396 (78%), Gaps = 7/396 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP D V+FE++LVKDLGV+IE RSLST+D+T++ L G A+F+GIG P
Sbjct: 227 SAEIPQYRLPIDVVDFEIQLVKDLGVRIETGRSLSTKDLTVQGLLDSGNDAVFLGIGLPQ 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKK---ESLPILKGTVIVLGAGD 157
+ IF+GLT E GFYTSK FLP+V+ SK GLC CK +SLP L G VIVLGAGD
Sbjct: 287 PKIDKIFEGLTTEQGFYTSKNFLPQVSDGSKPGLCP-CKATAAQSLPALSGNVIVLGAGD 345
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TAFDCATSALRCGA +V V FR+G NIRAVPEEV+LA EE+CEF+PFM+P +V +KD K
Sbjct: 346 TAFDCATSALRCGARRVFVCFRRGNNNIRAVPEEVELAREERCEFIPFMAPKEVIMKDGK 405
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
IA ++F RTEQ+++G W++D +Q +LKAN++ISAFGS L D + +EA+ PV L+++ P
Sbjct: 406 IAALEFFRTEQDDQGNWIQDPDQITRLKANFVISAFGSGLSDKETIEALNPVPLNRWNLP 465
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
EV+ T T VP VFCGGD A ++TTVESVNDGKTAAW+IH Y+Q + P LP
Sbjct: 466 EVDSKTQQTLVPAVFCGGDLAGAAETTVESVNDGKTAAWYIHCYLQ---GIPFDTTPKLP 522
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDM 397
F + ID VD+SVE+CG+KF NPFGLASAPPTTA++M+RRAFE GWGFAVTKTF+L KDM
Sbjct: 523 LFYTEIDNVDLSVEVCGVKFENPFGLASAPPTTATAMIRRAFEQGWGFAVTKTFALDKDM 582
Query: 398 VTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VTNVSPRIV+G TS H +GP+QG+FLNIELISEK A
Sbjct: 583 VTNVSPRIVRGVTSGHTFGPQQGAFLNIELISEKCA 618
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/264 (68%), Positives = 210/264 (79%), Gaps = 3/264 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMCTYN++DW EL+K+ E AGAD LELNLSCPHGMGE GMGLACGQDP++V NIS
Sbjct: 636 VVIASIMCTYNEEDWTELAKRAEAAGADMLELNLSCPHGMGESGMGLACGQDPKLVYNIS 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
LWVR++VKIPFFVKLTPNIT+I IA+AA GKADGVSAINTV GLMS+ AD PWPAVG
Sbjct: 696 LWVRAAVKIPFFVKLTPNITDIVAIAQAAQRGKADGVSAINTVQGLMSIKADTTPWPAVG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNATRP L+A+S I P FPI GIGGIDSADVALQFIQ GA +QI
Sbjct: 756 VDKRTTYGGVSGNATRPQALRAISLIGNKMPGFPICGIGGIDSADVALQFIQCGAPILQI 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST---QLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
CS++QNQDFTVV+DYI GL+ LLYLK+ + WDGQSPP QKGKP +D +G
Sbjct: 816 CSSIQNQDFTVVEDYILGLKALLYLKANHPPESLPWDGQSPPLQKLQKGKPVAPLKDDDG 875
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
K + +FGEYKK RE + ++ L+K
Sbjct: 876 KPLLHFGEYKKKREEKLAQMRLEK 899
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
Query: 445 NFGEYKKIRENLITELNLKK------LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+FGEYKK RE + ++ L+K + +++NG +Q N L +KDV+G A
Sbjct: 880 HFGEYKKKREEKLAQMRLEKGALWDPCAEEMETVKNGDASKQTNP----ALKIKDVLGAA 935
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ ++ +Y LDNKKQVVALI+DD+CINCGKCYM C DSGYQAI F TH HVTD+CTG
Sbjct: 936 LPKIGSYKSLDNKKQVVALIDDDLCINCGKCYMTCADSGYQAIQFDSVTHLPHVTDDCTG 995
Query: 559 CTLCLSI 565
C LCLS+
Sbjct: 996 CNLCLSV 1002
>gi|431896404|gb|ELK05816.1| Dihydropyrimidine dehydrogenase [NADP+] [Pteropus alecto]
Length = 687
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE EL+KDLGVKI C +SLS ++T+ L+++GY FIGIG P
Sbjct: 267 TSEIPQFRLPYDVVNFETELMKDLGVKIICGKSLSVNEMTLRTLKEEGYKVAFIGIGLPE 326
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 327 PNKDDIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGAVIVLGAGDTAF 384
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 385 DCATSALRCGARRVFIVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVA 444
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEVN
Sbjct: 445 MQFVRTEQDETGKWNEDEDQLVHLKADVVISAFGSVLNDPKVKEALSPIKFNRWGLPEVN 504
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W IHKYIQ + +VP KP LP F
Sbjct: 505 PETMQTSEPWVFAGGDIVGLANTTVESVNDGKQASWFIHKYIQSQYGTSVPAKPELPLFY 564
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ LKF NPFGLASA P+T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 565 TPVDLVDISVEMARLKFINPFGLASATPSTSASMIRRAFEAGWGFALTKTFSLDKDIVTN 624
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS +YGP Q SFLNIELISEKTA
Sbjct: 625 VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTA 657
>gi|391327117|ref|XP_003738053.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 1
[Metaseiulus occidentalis]
Length = 1032
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 308/394 (78%), Gaps = 4/394 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLPF+ V+FE++LVKDLGVKIE ++SL + T+E LR G A FIGIG P+
Sbjct: 229 SAEIPQYRLPFNVVSFELQLVKDLGVKIEYQKSLGSA-FTLESLRSGGVKAAFIGIGLPD 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
P+F+GL G+Y+SK FLP VA SK GLC CK SLP L GTVIVLGAGDTAF
Sbjct: 288 PKRFPVFEGLDSRSGYYSSKDFLPLVAAGSKAGLCA-CK-SSLPQLSGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD-VKDNKIA 219
DCATSALRCGA KV VVFRKG N+RAVPEE++LA EE CEFLPF++P V+ + KI
Sbjct: 346 DCATSALRCGAKKVFVVFRKGFNNVRAVPEEMELAKEESCEFLPFLAPRSVERLPGGKIK 405
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
+ F RTEQ E G W+EDEEQ IKLK N+IISAFGSTL D +VL A+ P+K++++G PEV
Sbjct: 406 SITFCRTEQLEDGSWIEDEEQTIKLKCNFIISAFGSTLCDAEVLAALAPLKMNRWGLPEV 465
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
+ T M TS P VF GGD A +++TTVE+VNDGK AAW +H Y+Q L VPD+P LPKF
Sbjct: 466 DQTRMTTSEPWVFAGGDIAGVAETTVEAVNDGKIAAWSMHSYLQSIAGLRVPDEPRLPKF 525
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VDI V +CG+KF NPFGLASAPPTT S+M+RRAF+NGWGFA+TKTF L KD+VT
Sbjct: 526 YTPIDGVDIGVTVCGIKFKNPFGLASAPPTTTSAMIRRAFQNGWGFALTKTFGLDKDVVT 585
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIV+GTTS H+YGP QGSFLNIELISEKT+
Sbjct: 586 NVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTS 619
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/277 (64%), Positives = 214/277 (77%), Gaps = 3/277 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC Y ++DW+EL+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 637 VVIASIMCAYIQEDWIELAKLAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 696
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIP F KLTPN+TNI IA+AAYEGKADGV+A NTVSGLMSLS G+PWPAVG
Sbjct: 697 SWVRGAVKIPIFAKLTPNVTNIVVIARAAYEGKADGVTATNTVSGLMSLSGKGDPWPAVG 756
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGV GNA RP+ L+AVS+IA P FPIL GGIDSAD LQF+QAGA +QI
Sbjct: 757 VEKRTTYGGVCGNAIRPIALRAVSAIANALPGFPILATGGIDSADAGLQFLQAGASVLQI 816
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTV+DDYITGL+ LYLKS Q + WD QSPP VHQKGKP E +
Sbjct: 817 CSSVQNQDFTVIDDYITGLKCDLYLKSLEQCQNWDNQSPPIDVHQKGKPVPDVGLSE--S 874
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPRQ 840
+PNFG++KK +E+L+ + ++ D + G RQ
Sbjct: 875 LPNFGQFKKTKEDLLAKRKVEIDLLDDLPEDTGPNRQ 911
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
L +++PNFG++KK +E+L+ + ++ D + G P RQ I +KD+IG +
Sbjct: 871 LSESLPNFGQFKKTKEDLLAKRKVEIDLLDDLPEDTG-PNRQ----TAEIPQIKDMIGSS 925
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ +V ++ +LD K+QVVA++ DDMCINCGKCYM C DSGYQAITF +TH VTD+CTG
Sbjct: 926 LSQVGSFGQLDVKQQVVAVVTDDMCINCGKCYMTCADSGYQAITFDSKTHMPFVTDDCTG 985
Query: 559 CTLCLSI 565
C LC S+
Sbjct: 986 CALCYSV 992
>gi|157125488|ref|XP_001654354.1| dihydropyrimidine dehydrogenase [Aedes aegypti]
gi|108873619|gb|EAT37844.1| AAEL010204-PA [Aedes aegypti]
Length = 1056
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/396 (63%), Positives = 310/396 (78%), Gaps = 7/396 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP D V+FE++LVKDLGVKIE RSLST+D+T++ L G A+F+GIG P
Sbjct: 246 SAEIPQYRLPIDVVDFEIQLVKDLGVKIETGRSLSTKDLTVQGLLDSGNDAVFLGIGLPQ 305
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKK---ESLPILKGTVIVLGAGD 157
+ IF+GLT E GFYTSK FLP+V+ SK GLC CK +SLP L G VIVLGAGD
Sbjct: 306 PKIDKIFEGLTTEQGFYTSKNFLPQVSDGSKPGLCP-CKATAAQSLPALSGNVIVLGAGD 364
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TAFDCATSALRCGA +V V FR+G NIRAVPEEV+LA EE+CEF+PFM+P +V +KD
Sbjct: 365 TAFDCATSALRCGARRVFVCFRRGNNNIRAVPEEVELAREERCEFIPFMAPKEVIMKDGT 424
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
IA ++F RTEQ+++G W++D +Q +LKAN++ISAFGS L D + +EA+ PV L+++ P
Sbjct: 425 IAALEFFRTEQDDQGNWIQDPDQITRLKANFVISAFGSGLSDKETIEALNPVPLNRWNLP 484
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
EV+ T T +P +FCGGD A ++TTVESVNDGKTAAW+IH Y+Q + P LP
Sbjct: 485 EVDSKTQQTPIPAIFCGGDLAGAAETTVESVNDGKTAAWYIHCYLQ---GIPFDTTPKLP 541
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDM 397
F + ID VD+SVE+CG+KF NPFGLASAPPTTA++M+RRAFE GWGFAVTKTF+L KDM
Sbjct: 542 LFYTEIDNVDLSVEVCGVKFENPFGLASAPPTTATAMIRRAFEQGWGFAVTKTFALDKDM 601
Query: 398 VTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VTNVSPRIV+G TS H +GP+QG+FLNIELISEK A
Sbjct: 602 VTNVSPRIVRGVTSGHTFGPQQGAFLNIELISEKCA 637
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/264 (68%), Positives = 210/264 (79%), Gaps = 3/264 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMCTYN++DW EL+K+ E AGAD LELNLSCPHGMGE GMGLACGQDP++V NIS
Sbjct: 655 VVIASIMCTYNEEDWTELAKRAEAAGADMLELNLSCPHGMGESGMGLACGQDPKLVYNIS 714
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
LWVR++VKIPFFVKLTPNIT+I IA+AA GKADGVSAINTV GLMS+ AD PWPAVG
Sbjct: 715 LWVRAAVKIPFFVKLTPNITDIVAIAQAAQRGKADGVSAINTVQGLMSIKADTTPWPAVG 774
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNATRP L+A+S I P FPI GIGGIDSADVALQFIQ GA +QI
Sbjct: 775 VDKRTTYGGVSGNATRPQALRAISLIGNKMPGFPICGIGGIDSADVALQFIQCGAPILQI 834
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST---QLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
CS++QNQDFTVV+DYI GL+ LLYLK+ + WDGQSPP QKGKP +D +G
Sbjct: 835 CSSIQNQDFTVVEDYILGLKALLYLKANPPPESLPWDGQSPPLQKLQKGKPVAPLKDDDG 894
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
K + +FGEYKK RE + ++ L+K
Sbjct: 895 KPLLHFGEYKKKREEKLAQMRLEK 918
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
Query: 445 NFGEYKKIRENLITELNLKK------LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+FGEYKK RE + ++ L+K + +++NG +Q N L VKDV+G A
Sbjct: 899 HFGEYKKKREEKLAQMRLEKGALWDPCAEEMETVKNGDASKQTNP----ALKVKDVLGAA 954
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ ++ +Y LDNKKQVVALI+DD+CINCGKCYM C DSGYQAI F TH HVTD+CTG
Sbjct: 955 LPKIGSYKSLDNKKQVVALIDDDLCINCGKCYMTCADSGYQAIQFDSVTHLPHVTDDCTG 1014
Query: 559 CTLCLSI 565
C LCLS+
Sbjct: 1015 CNLCLSV 1021
>gi|391327119|ref|XP_003738054.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 2
[Metaseiulus occidentalis]
Length = 1031
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 308/394 (78%), Gaps = 4/394 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLPF+ V+FE++LVKDLGVKIE ++SL + T+E LR G A FIGIG P+
Sbjct: 229 SAEIPQYRLPFNVVSFELQLVKDLGVKIEYQKSLGSA-FTLESLRSGGVKAAFIGIGLPD 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
P+F+GL G+Y+SK FLP VA SK GLC CK SLP L GTVIVLGAGDTAF
Sbjct: 288 PKRFPVFEGLDSRSGYYSSKDFLPLVAAGSKAGLCA-CK-SSLPQLSGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD-VKDNKIA 219
DCATSALRCGA KV VVFRKG N+RAVPEE++LA EE CEFLPF++P V+ + KI
Sbjct: 346 DCATSALRCGAKKVFVVFRKGFNNVRAVPEEMELAKEESCEFLPFLAPRSVERLPGGKIK 405
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
+ F RTEQ E G W+EDEEQ IKLK N+IISAFGSTL D +VL A+ P+K++++G PEV
Sbjct: 406 SITFCRTEQLEDGSWIEDEEQTIKLKCNFIISAFGSTLCDAEVLAALAPLKMNRWGLPEV 465
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
+ T M TS P VF GGD A +++TTVE+VNDGK AAW +H Y+Q L VPD+P LPKF
Sbjct: 466 DQTRMTTSEPWVFAGGDIAGVAETTVEAVNDGKIAAWSMHSYLQSIAGLRVPDEPRLPKF 525
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VDI V +CG+KF NPFGLASAPPTT S+M+RRAF+NGWGFA+TKTF L KD+VT
Sbjct: 526 YTPIDGVDIGVTVCGIKFKNPFGLASAPPTTTSAMIRRAFQNGWGFALTKTFGLDKDVVT 585
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIV+GTTS H+YGP QGSFLNIELISEKT+
Sbjct: 586 NVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTS 619
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/257 (68%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC Y ++DW+EL+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 637 VVIASIMCAYIQEDWIELAKLAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 696
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIP F KLTPN+TNI IA+AAYEGKADGV+A NTVSGLMSLS G+PWPAVG
Sbjct: 697 SWVRGAVKIPIFAKLTPNVTNIVVIARAAYEGKADGVTATNTVSGLMSLSGKGDPWPAVG 756
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGV GNA RP+ L+AVS+IA P FPIL GGIDSAD LQF+QAGA +QI
Sbjct: 757 VEKRTTYGGVCGNAIRPIALRAVSAIANALPGFPILATGGIDSADAGLQFLQAGASVLQI 816
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTV+DDYITGL+ LYLKS Q + WD QSPP VHQKGKP E +
Sbjct: 817 CSSVQNQDFTVIDDYITGLKCDLYLKSLEQCQNWDNQSPPIDVHQKGKPVPDVGLSE--S 874
Query: 804 IPNFGEYKKIRENLITE 820
+PNFG++KK +E+L+ +
Sbjct: 875 LPNFGQFKKTKEDLLAK 891
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
L +++PNFG++KK +E+L+ + + S + P RQ I +KD+IG +
Sbjct: 871 LSESLPNFGQFKKTKEDLLAKRKVPYRAQ--WSRTDTGPNRQ----TAEIPQIKDMIGSS 924
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ +V ++ +LD K+QVVA++ DDMCINCGKCYM C DSGYQAITF +TH VTD+CTG
Sbjct: 925 LSQVGSFGQLDVKQQVVAVVTDDMCINCGKCYMTCADSGYQAITFDSKTHMPFVTDDCTG 984
Query: 559 CTLCLSI 565
C LC S+
Sbjct: 985 CALCYSV 991
>gi|391327121|ref|XP_003738055.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 3
[Metaseiulus occidentalis]
Length = 1039
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 308/394 (78%), Gaps = 4/394 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLPF+ V+FE++LVKDLGVKIE ++SL + T+E LR G A FIGIG P+
Sbjct: 229 SAEIPQYRLPFNVVSFELQLVKDLGVKIEYQKSLGSA-FTLESLRSGGVKAAFIGIGLPD 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
P+F+GL G+Y+SK FLP VA SK GLC CK SLP L GTVIVLGAGDTAF
Sbjct: 288 PKRFPVFEGLDSRSGYYSSKDFLPLVAAGSKAGLCA-CK-SSLPQLSGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD-VKDNKIA 219
DCATSALRCGA KV VVFRKG N+RAVPEE++LA EE CEFLPF++P V+ + KI
Sbjct: 346 DCATSALRCGAKKVFVVFRKGFNNVRAVPEEMELAKEESCEFLPFLAPRSVERLPGGKIK 405
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
+ F RTEQ E G W+EDEEQ IKLK N+IISAFGSTL D +VL A+ P+K++++G PEV
Sbjct: 406 SITFCRTEQLEDGSWIEDEEQTIKLKCNFIISAFGSTLCDAEVLAALAPLKMNRWGLPEV 465
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
+ T M TS P VF GGD A +++TTVE+VNDGK AAW +H Y+Q L VPD+P LPKF
Sbjct: 466 DQTRMTTSEPWVFAGGDIAGVAETTVEAVNDGKIAAWSMHSYLQSIAGLRVPDEPRLPKF 525
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VDI V +CG+KF NPFGLASAPPTT S+M+RRAF+NGWGFA+TKTF L KD+VT
Sbjct: 526 YTPIDGVDIGVTVCGIKFKNPFGLASAPPTTTSAMIRRAFQNGWGFALTKTFGLDKDVVT 585
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIV+GTTS H+YGP QGSFLNIELISEKT+
Sbjct: 586 NVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTS 619
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/257 (68%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC Y ++DW+EL+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 637 VVIASIMCAYIQEDWIELAKLAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 696
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIP F KLTPN+TNI IA+AAYEGKADGV+A NTVSGLMSLS G+PWPAVG
Sbjct: 697 SWVRGAVKIPIFAKLTPNVTNIVVIARAAYEGKADGVTATNTVSGLMSLSGKGDPWPAVG 756
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGV GNA RP+ L+AVS+IA P FPIL GGIDSAD LQF+QAGA +QI
Sbjct: 757 VEKRTTYGGVCGNAIRPIALRAVSAIANALPGFPILATGGIDSADAGLQFLQAGASVLQI 816
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTV+DDYITGL+ LYLKS Q + WD QSPP VHQKGKP E +
Sbjct: 817 CSSVQNQDFTVIDDYITGLKCDLYLKSLEQCQNWDNQSPPIDVHQKGKPVPDVGLSE--S 874
Query: 804 IPNFGEYKKIRENLITE 820
+PNFG++KK +E+L+ +
Sbjct: 875 LPNFGQFKKTKEDLLAK 891
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQI--NTPVETILSVKDVIG 496
L +++PNFG++KK +E+L+ + + ++ LP N I +KD+IG
Sbjct: 871 LSESLPNFGQFKKTKEDLLAKRKVPYRAQWSRTVIRLLPPEDTGPNRQTAEIPQIKDMIG 930
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDEC 556
++ +V ++ +LD K+QVVA++ DDMCINCGKCYM C DSGYQAITF +TH VTD+C
Sbjct: 931 SSLSQVGSFGQLDVKQQVVAVVTDDMCINCGKCYMTCADSGYQAITFDSKTHMPFVTDDC 990
Query: 557 TGCTLCLSI 565
TGC LC S+
Sbjct: 991 TGCALCYSV 999
>gi|13399651|pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399652|pdb|1H7X|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399653|pdb|1H7X|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399654|pdb|1H7X|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
Length = 1025
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CH-SPLPSIRGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 406 VQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/268 (65%), Positives = 213/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELS+K E +GADALELNLS PHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSAPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+GWDGQSP T HQKGKP + + GK
Sbjct: 815 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+PNFG Y + R+ +I E + LK+ N+
Sbjct: 875 KLPNFGPYLEQRKKIIAEEKMRLKEQNA 902
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
+ + +PNFG Y + R+ +I E + LK+ N+ L+ R+ P + I ++KDVI
Sbjct: 871 LMGKKLPNFGPYLEQRKKIIAEEKMRLKEQNAAFPPLE-----RKPFIPKKPIPAIKDVI 925
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD
Sbjct: 926 GKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDT 985
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 986 CTGCTLCLSV 995
>gi|13399647|pdb|1H7W|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399648|pdb|1H7W|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399649|pdb|1H7W|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399650|pdb|1H7W|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|20663633|pdb|1GT8|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663634|pdb|1GT8|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663635|pdb|1GT8|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663636|pdb|1GT8|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663641|pdb|1GTE|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663642|pdb|1GTE|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663643|pdb|1GTE|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663644|pdb|1GTE|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663675|pdb|1GTH|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663676|pdb|1GTH|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663677|pdb|1GTH|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663678|pdb|1GTH|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
Length = 1025
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CH-SPLPSIRGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 406 VQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 214/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+GWDGQSP T HQKGKP + + GK
Sbjct: 815 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+PNFG Y + R+ +I E + LK+ N+
Sbjct: 875 KLPNFGPYLEQRKKIIAEEKMRLKEQNA 902
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
+ + +PNFG Y + R+ +I E + LK+ N+ L+ R+ P + I ++KDVI
Sbjct: 871 LMGKKLPNFGPYLEQRKKIIAEEKMRLKEQNAAFPPLE-----RKPFIPKKPIPAIKDVI 925
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD
Sbjct: 926 GKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDT 985
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 986 CTGCTLCLSV 995
>gi|47522904|ref|NP_999209.1| dihydropyrimidine dehydrogenase [NADP(+)] precursor [Sus scrofa]
gi|2498311|sp|Q28943.1|DPYD_PIG RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil
dehydrogenase; Flags: Precursor
gi|558307|gb|AAA57475.1| dihydropyrimidine dehydrogenase [Sus scrofa]
Length = 1025
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CH-SPLPSIRGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 406 VQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 214/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+GWDGQSP T HQKGKP + + GK
Sbjct: 815 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+PNFG Y + R+ +I E + LK+ N+
Sbjct: 875 KLPNFGPYLEQRKKIIAEEKMRLKEQNA 902
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
+ + +PNFG Y + R+ +I E + LK+ N+ L+ R+ P + I ++KDVI
Sbjct: 871 LMGKKLPNFGPYLEQRKKIIAEEKMRLKEQNAAFPPLE-----RKPFIPKKPIPAIKDVI 925
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD
Sbjct: 926 GKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDT 985
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 986 CTGCTLCLSV 995
>gi|334324361|ref|XP_001381838.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Monodelphis
domestica]
Length = 1051
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVK+ + LS +T+ L+++GY A+FIGIG P
Sbjct: 254 TSEIPQFRLPYDVVNFEIELMKDLGVKVIHGKELSVTGMTLGTLKEEGYKAVFIGIGLPE 313
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGL+ + GFYTSK FLP VA +SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 314 PNKDSIFQGLSVDQGFYTSKDFLPLVAKASKPGMCA-CH-SPLPSIQGAVIVLGAGDTAF 371
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 372 DCATSALRCGARRVFVVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 431
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G W EDE+Q ++LKA+ +ISAFGS L D V EA+ P+K +++G PE++
Sbjct: 432 MQFVRTEQDESGNWNEDEDQLVQLKADVVISAFGSVLSDPKVKEAMNPIKFNRWGLPEID 491
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD A L++TTVESVNDGK A+W++HKYIQ + +V KP LP F
Sbjct: 492 PETMQTSEPWVFAGGDIAGLANTTVESVNDGKQASWYMHKYIQSQYGASVSSKPELPLFY 551
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKFPNPFGLASAPP T++SM+RRAFE GWGFAVTKTFSL KD+VTN
Sbjct: 552 TPIDLVDISVEMAGLKFPNPFGLASAPPATSASMIRRAFEAGWGFAVTKTFSLDKDIVTN 611
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++G TS +YGP Q SFLNIELISEKTA
Sbjct: 612 VSPRIIRGITSGPVYGPGQSSFLNIELISEKTA 644
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 208/268 (77%), Gaps = 1/268 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIAS+MCTYNK+DW ELSK E AGADALELNLSC HGMGERGMGLACGQDP+MVRNI
Sbjct: 661 NILIASLMCTYNKNDWTELSKMAEAAGADALELNLSCSHGMGERGMGLACGQDPDMVRNI 720
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
W+R +V+IPFF KLTPNIT+I IA+AA EG ADGV+A NTV GLM L ADG PWPA+
Sbjct: 721 CRWIRQAVRIPFFAKLTPNITDIVSIARAAQEGGADGVTATNTVLGLMGLKADGTPWPAI 780
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYG +SG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+Q+GA +Q
Sbjct: 781 GLGKKTTYGSISGTAVRPIALRAVAAIARDLPGFPILATGGIDSAESGLQFLQSGASVLQ 840
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +LK WDGQSP T HQKGKP + + GK
Sbjct: 841 VCSAVQNQDFTVIKDYCTGLKALLYLKSIEELKDWDGQSPATVRHQKGKPVPRIAELTGK 900
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSDG 830
+P+FG Y + R+ ++ E +K + +G
Sbjct: 901 KLPSFGPYLEQRKKIMAENKIKLMEQNG 928
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ ++ E +K + +G ++ P + I +KD+IG+A+Q
Sbjct: 900 KKLPSFGPYLEQRKKIMAENKIKLMEQNG---SFSPLEKSYFVPKKPIPKIKDIIGKALQ 956
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y EL+ +QVVALI+++MCINCGKCYM CNDSGYQAI F P TH V D CTGCT
Sbjct: 957 YIGTYGELNKIEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPNTHLPTVNDSCTGCT 1016
Query: 561 LCLSI 565
LCLS+
Sbjct: 1017 LCLSV 1021
>gi|403283991|ref|XP_003933373.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Saimiri
boliviensis boliviensis]
Length = 1204
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 403 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 462
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C LP ++G VIVLGAGDTAF
Sbjct: 463 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKTGMC--VCHSPLPSIRGVVIVLGAGDTAF 520
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATS LRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 521 DCATSVLRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 580
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q ++LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 581 MQFVRTEQDETGKWNEDEDQMVRLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 640
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 641 PETMQTSEPWVFAGGDVVGLANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFY 700
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDI+VE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 701 TPIDLVDITVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 760
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 761 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 793
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/268 (64%), Positives = 215/268 (80%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELSK +E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 810 NIVIASIMCSYNKNDWMELSKMSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 869
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 870 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 929
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGG+SG A RP+ L+AV+SIA+ P FPIL GGIDSA+ ALQF+ +GA +Q
Sbjct: 930 GIAKRTTYGGMSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESALQFLHSGASVLQ 989
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ +LYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 990 VCSAIQNQDFTVIEDYCTGLKAMLYLKSIAELQDWDGQSPATVSHQKGKPVPRIPELLGK 1049
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG Y + R+ +I E + LK+ N+
Sbjct: 1050 KLPSFGPYLEQRKKIIAENKIRLKEQNA 1077
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
L + +P+FG Y + R+ +I E + LK+ N+ L KR P I ++KDVI
Sbjct: 1046 LLGKKLPSFGPYLEQRKKIIAENKIRLKEQNAVFSPL-----KRNCFIPKRPIPTIKDVI 1100
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+ + + EL N + VVA+I+++MCINCGKCYM CNDSGYQAI F PETH + D
Sbjct: 1101 GKALPYLGTFGELSNVEHVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTIADT 1160
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 1161 CTGCTLCLSV 1170
>gi|197100733|ref|NP_001126169.1| dihydropyrimidine dehydrogenase [NADP(+)] [Pongo abelii]
gi|75041534|sp|Q5R895.1|DPYD_PONAB RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|55730588|emb|CAH92015.1| hypothetical protein [Pongo abelii]
Length = 1025
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEAMSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TAIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+S A+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSTARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E + LK+ N + + KR P + ++KDVIG+A
Sbjct: 874 KKLPSFGPYLEQRKKIIAENKIRLKEQN-----IASSPHKRNCFIPKRPVPTIKDVIGKA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTG
Sbjct: 929 LQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTG 988
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 989 CTLCLSV 995
>gi|390362443|ref|XP_001197282.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 958
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 310/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP++ V+FEV+ +KDLGVK+E ++ L +T+E L+ G AIF+G+G P
Sbjct: 228 SAEIPQFRLPYEVVSFEVDQMKDLGVKVELKKGLGMNGMTLESLKSSGQEAIFVGLGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A PIFQ LT E GFYTSK +LP V+ +SK G+C CK SLP L G VIVLGAGDTAF
Sbjct: 288 AKRAPIFQDLTVEQGFYTSKDYLPLVSLASKAGMCA-CK-SSLPKLHGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA+RCGA +V +VFRKG T IRAVPEE+ +A EE+CEF+PF+SP +V +K +IA
Sbjct: 346 DCATSAVRCGAKRVFIVFRKGFTTIRAVPEEMDVAREERCEFMPFLSPRKVILKGGRIAA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++ RTEQ+++ W+EDEEQ +LKA++IISAFGSTLL+ +V A+ P++ +++G PEV+
Sbjct: 406 LELCRTEQDDEDNWIEDEEQTTRLKADFIISAFGSTLLNEEVKTALSPIRFNRWGLPEVS 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM S P FCGGD ++ TTVESVNDGKTAAW +HKY+Q + + VP P LPKF
Sbjct: 466 TDTMQMSEPWAFCGGDLGGVAQTTVESVNDGKTAAWFMHKYLQSLHGVPVPSTPALPKFC 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVD SVEICGLKFPNP+GLASAPPTT++ M+RRAFE GWG+AVTKT+SL KD VTN
Sbjct: 526 TPIDLVDTSVEICGLKFPNPYGLASAPPTTSAPMIRRAFEAGWGYAVTKTYSLDKDFVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS ++YGP QGSFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGNVYGPGQGSFLNIELISEKTA 618
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/228 (72%), Positives = 190/228 (83%), Gaps = 1/228 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++NKDDW +L+K +E+AGADALELNLSCPHGMGE+GMGLACGQDPE+V NI
Sbjct: 636 IVIASIMCSFNKDDWTKLAKMSEEAGADALELNLSCPHGMGEKGMGLACGQDPELVLNIC 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF KLTPN+TNI DIA+AA EG ADGV+A NTVSGLM L A N WPAVG
Sbjct: 696 RWVRAAVKIPFFAKLTPNVTNILDIARAAKEGNADGVTATNTVSGLMGLKASSNAWPAVG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNA RP+ LKAVS IA P FPIL GGIDSA+ ALQF+ AGA AVQ+
Sbjct: 756 KQKKTTYGGVSGNAIRPIALKAVSVIANNLPGFPILATGGIDSAESALQFLHAGASAVQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGK 791
CSA+QNQDFT+++DY+TGL+ LLYL S L WDGQSPPT HQKGK
Sbjct: 816 CSAIQNQDFTLIEDYVTGLKALLYLNSLDDLGDWDGQSPPTVRHQKGK 863
>gi|115627904|ref|XP_781238.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 900
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 311/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP++ V+FEV+ +KDLGVK+E ++ L +T+E L+ G+ AIF+G+G P
Sbjct: 228 SAEIPQFRLPYEVVSFEVDQMKDLGVKVELKKGLGMNGMTLESLKISGHEAIFVGLGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A PIFQ LT E GFYTSK +LP V+ +SK G+C CK SLP L G VIVLGAGDTAF
Sbjct: 288 AKRAPIFQDLTVEQGFYTSKDYLPLVSLASKAGMCA-CKT-SLPKLDGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA+RCGA +V +VFRKG T IRAVPEE+ +A EE+CEF+PF+SP +V +K +IA
Sbjct: 346 DCATSAVRCGAKRVFIVFRKGFTTIRAVPEEMDVAREERCEFMPFLSPRKVILKGGRIAA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++ RTEQ+++ W+EDEEQ +LKA++IISAFGSTLL+ +V A+ P++ +++G PEV+
Sbjct: 406 LELCRTEQDDEDNWIEDEEQTTRLKADFIISAFGSTLLNEEVKTALSPIRFNRWGLPEVS 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM S P FCGGD ++ TTVESVNDGKTAAW +HKY+Q + + VP P LPKF
Sbjct: 466 TDTMQMSEPWAFCGGDLGGVAQTTVESVNDGKTAAWFMHKYLQSLHGVPVPSTPALPKFC 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVD SVEICGLKFPNP+GLASAPPTT++ M+RRAFE GWG+AVTKT+SL KD VTN
Sbjct: 526 TPIDLVDTSVEICGLKFPNPYGLASAPPTTSAPMIRRAFEAGWGYAVTKTYSLDKDFVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS ++YGP QGSFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGNVYGPGQGSFLNIELISEKTA 618
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/228 (72%), Positives = 190/228 (83%), Gaps = 1/228 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++NKDDW +L+K +E+AGADALELNLSCPHGMGE+GMGLACGQDPE+V NI
Sbjct: 636 IVIASIMCSFNKDDWTKLAKMSEEAGADALELNLSCPHGMGEKGMGLACGQDPELVLNIC 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF KLTPN+TNI DIA+AA EG ADGV+A NTVSGLM L A N WPAVG
Sbjct: 696 RWVRAAVKIPFFAKLTPNVTNILDIARAAKEGNADGVTATNTVSGLMGLKASSNAWPAVG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNA RP+ LKAVS IA P FPIL GGIDSA+ ALQF+ AGA AVQ+
Sbjct: 756 KQKKTTYGGVSGNAIRPIALKAVSVIANNLPGFPILATGGIDSAESALQFLHAGASAVQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGK 791
CSA+QNQDFT+++DY+TGL+ LLYL S L WDGQSPPT HQKGK
Sbjct: 816 CSAIQNQDFTLIEDYVTGLKALLYLNSLDDLGDWDGQSPPTVRHQKGK 863
>gi|332221979|ref|XP_003260142.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 1
[Nomascus leucogenys]
Length = 1025
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLGTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCS-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFVVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|124297137|gb|AAI31778.1| Dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFVNPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|332809597|ref|XP_513583.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 3 [Pan
troglodytes]
gi|410212198|gb|JAA03318.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410260464|gb|JAA18198.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410297350|gb|JAA27275.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410355311|gb|JAA44259.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
Length = 1025
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +D PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDATPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|558305|gb|AAA57474.1| dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRSCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|397474053|ref|XP_003808505.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Pan paniscus]
Length = 1025
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +D PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDATPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|119943098|ref|NP_000101.2| dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 [Homo sapiens]
gi|160332325|sp|Q12882.2|DPYD_HUMAN RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil
dehydrogenase; Flags: Precursor
gi|693912|gb|AAB51366.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|6729338|dbj|BAA89789.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|119593409|gb|EAW73003.1| dihydropyrimidine dehydrogenase, isoform CRA_b [Homo sapiens]
Length = 1025
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|158255870|dbj|BAF83906.1| unnamed protein product [Homo sapiens]
Length = 1025
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEGLQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|124298016|gb|AAI31779.1| Dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 466 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+G++A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGITATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q
Sbjct: 874 KKLPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSP--LKRNCFIPKRPIPTIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 931 YLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
>gi|296489272|tpg|DAA31385.1| TPA: dihydropyrimidine dehydrogenase [Bos taurus]
Length = 1025
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP D VNFE+EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPHDVVNFEIELMKDLGVKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C L I +GTVIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CHSPLLSI-RGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEVELAREEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDEDQIVCLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVE+VNDGK A+W+IH+YIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDVVGIANTTVEAVNDGKQASWYIHRYIQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GW FA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 174/275 (63%), Positives = 214/275 (77%), Gaps = 3/275 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN++DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ GA +Q
Sbjct: 755 GREKRTTYGGVSGTAIRPIALRAVTTIARALPEFPILATGGIDSAESGLQFLHGGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFT++ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + GK
Sbjct: 815 VCSAIQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQSPATKSHQKGKPVPCIAELVGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQN 835
+P+FG Y + R+ +I E L LKK N + L+
Sbjct: 875 KLPSFGPYLEKRKKIIAEEKLRLKKENVTVLPLER 909
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 89/127 (70%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E L LKK N + L+ R P + I SVKDVIG+A
Sbjct: 874 KKLPSFGPYLEKRKKIIAEEKLRLKKENVTVLPLE-----RNHFIPKKPIPSVKDVIGKA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + Y EL+N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTG
Sbjct: 929 LQYLGTYGELNNTEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTG 988
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 989 CTLCLSV 995
>gi|343962109|dbj|BAK62642.1| dihydropyrimidine dehydrogenase [NADP+] precursor [Pan troglodytes]
Length = 471
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/393 (64%), Positives = 306/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 63 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 122
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGD+AF
Sbjct: 123 PNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCA-CHS-PLPSIRGVVIVLGAGDSAF 180
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 181 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 240
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 241 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 300
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS VF GGD L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F
Sbjct: 301 PETMQTSEAWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFY 360
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKT SL KD+VTN
Sbjct: 361 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTLSLDKDIVTN 420
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 421 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 453
>gi|344293562|ref|XP_003418491.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Loxodonta
africana]
Length = 1052
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D V+FE+EL+KDLGVKI C +SLS ++T+ L+++GY A FIGIG P
Sbjct: 255 TSEIPQFRLPYDVVDFEIELMKDLGVKIICGKSLSVNEMTLNTLKEEGYKAAFIGIGLPE 314
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
AN IF+GLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 315 ANKDRIFEGLTQDQGFYTSKDFLPLVAKGSKPGMCA-CH-SPLPSIRGAVIVLGAGDTAF 372
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 373 DCATSALRCGACRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVVVKGGRIVA 432
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W ED++Q + LKA+ +ISAFGS L D V EA+ P+K +K+ PEV+
Sbjct: 433 MQFVRTEQDETGKWNEDDDQIVHLKADVVISAFGSVLSDPKVKEALSPIKFNKWDLPEVD 492
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+WHIHKYIQ + +V KP LP F
Sbjct: 493 PETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWHIHKYIQSQYGASVSAKPELPLFC 552
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ G+KF NPFGLASA P T++SM+RRAFE GWGFAVTKTFSL KD+VTN
Sbjct: 553 TPIDLVDISVEMAGMKFTNPFGLASATPATSASMIRRAFEAGWGFAVTKTFSLDKDIVTN 612
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 613 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 645
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 212/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 662 NIVIASIMCSYNKNDWMELSKMAEHSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 721
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V +PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L+ADG PWPAV
Sbjct: 722 CRWVRQAVHVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLNADGTPWPAV 781
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FP+L GGIDSA+ LQF+ +GA +Q
Sbjct: 782 GVGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPVLATGGIDSAESGLQFLHSGASVLQ 841
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP Q + GK
Sbjct: 842 VCSAIQNQDFTVIGDYCTGLKALLYLKSIEELQDWDGQSPATVRHQKGKPVPQIAELTGK 901
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG Y + R+ +I E + LK+ N+
Sbjct: 902 KLPSFGPYLEQRKKIIAENKIRLKEQNA 929
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 89/127 (70%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E + LK+ N+ L+ R+ P + I ++KDVIG+A
Sbjct: 901 KKLPSFGPYLEQRKKIIAENKIRLKEQNAAFSPLE-----RKYFVPKKPIPAIKDVIGKA 955
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
++ + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTG
Sbjct: 956 LKYLGMFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDSCTG 1015
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 1016 CTLCLSV 1022
>gi|354495028|ref|XP_003509634.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+], partial
[Cricetulus griseus]
Length = 655
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 307/393 (78%), Gaps = 3/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLST +T+ L+++GY A FIGIG P
Sbjct: 249 SSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSTDGMTLSTLKENGYQAAFIGIGLPE 308
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 309 PKKDHIFQGLTQDQGFYTSKDFLPLVAKGSKTGMCA-CHS-PLPSIRGAVIVLGAGDTAF 366
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP V VKD KI
Sbjct: 367 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRNVIVKDGKIVA 426
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G WVEDEEQ ++LKA+ +ISAFGS L D V+EA+ P+K +++G PEV+
Sbjct: 427 MQFVRTEQDETGNWVEDEEQMVRLKADVVISAFGSVLSDPKVMEALSPIKFNRWGLPEVD 486
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF +++TTVESVNDGK A+W+IHKYIQE+ V +P LP F
Sbjct: 487 PETMQTSEPWVF-DXXXXGMANTTVESVNDGKQASWYIHKYIQEQYGTLVSAQPELPLFY 545
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 546 TPVDLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTN 605
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 606 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 638
>gi|296208611|ref|XP_002751145.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Callithrix
jacchus]
Length = 974
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 306/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT + GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 288 PNKDTIFQGLTRDQGFYTSKDFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+ G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+
Sbjct: 406 MQFVRTEQDGTGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDVVGLANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEVGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 161/210 (76%), Gaps = 1/210 (0%)
Query: 616 DPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSA 675
DPE+VRNI WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +
Sbjct: 636 DPELVRNICRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKS 695
Query: 676 DGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFI 735
DG PWPAVG K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ ALQF+
Sbjct: 696 DGTPWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESALQFL 755
Query: 736 QAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAY 794
+GA +Q+CSA+QNQDFTV++DY TGL+ +LYLKS +L+ WDGQSP T HQKGKP
Sbjct: 756 HSGASVLQVCSAIQNQDFTVIEDYCTGLKAMLYLKSIEELQDWDGQSPATVSHQKGKPVP 815
Query: 795 QFRDKEGKAIPNFGEYKKIRENLITELNLK 824
+ + GK +P+FG Y + R+ +I E ++
Sbjct: 816 RIPELLGKKLPSFGPYLEQRKKIIAENKIR 845
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
L + +P+FG Y + R+ +I E + K+ N+ L KR P I ++KDVI
Sbjct: 820 LLGKKLPSFGPYLEQRKKIIAENKIRFKEQNAVFSPL-----KRNCFIPKRPIPTIKDVI 874
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+ + + EL N + VVA+I+++MCINCGKCYM CNDSGYQAI F PETH + D
Sbjct: 875 GKALPYLGTFGELSNVEHVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTIADT 934
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 935 CTGCTLCLSV 944
>gi|426216018|ref|XP_004002266.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Ovis aries]
Length = 1025
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C L I +G VIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKPGMCA-CHSPLLSI-RGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAREEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 406 MQFIRTEQDETGKWNEDEDQIVCLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IH+YIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDVVGIANTTVESVNDGKQASWYIHRYIQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GW FA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAGLKFANPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 212/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN++DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GLGKRTTYGGVSGIAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + GK
Sbjct: 815 VCSAIQNQDFTVIQDYCTGLKALLYLKSIEELQDWDGQSPATRSHQKGKPVPCIAELVGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG Y + R+ +I E L LK+ N+
Sbjct: 875 KLPSFGPYLEKRKKIIAEEKLRLKEENA 902
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E L LK+ N+ L R P + I SVKDVIG+A
Sbjct: 874 KKLPSFGPYLEKRKKIIAEEKLRLKEENATFPPLA-----RNHFIPKKPIPSVKDVIGKA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + Y EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTG
Sbjct: 929 LQYLGTYGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTG 988
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 989 CTLCLSV 995
>gi|320166820|gb|EFW43719.1| dihydropyrimidine dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 1056
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/396 (62%), Positives = 309/396 (78%), Gaps = 4/396 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRD-ITIEKLRKDGYTAIFIGIGKP 99
SSEIPQYRLP+D V+FEV+L+KDLGVK+E E+ +T++ L+KDGY A+F+G+G P
Sbjct: 259 SSEIPQYRLPYDVVDFEVQLMKDLGVKVEYEKPFGVASGLTLQSLQKDGYEAVFVGVGLP 318
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKK--ESLPILKGTVIVLGAGD 157
A +PIF LT+ GFYTSK FLP V+ +SK G+CG CK +LP L G VIVLGAGD
Sbjct: 319 KAKTVPIFDKLTQAEGFYTSKDFLPLVSKASKPGMCG-CKSAANALPPLHGNVIVLGAGD 377
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TAFDCATSALRCGA +V VVFRKG TN+RAVPEEV LA EEKCEFLPF SP V VK+ K
Sbjct: 378 TAFDCATSALRCGAKRVTVVFRKGFTNMRAVPEEVDLAKEEKCEFLPFASPRNVIVKEGK 437
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
I G++ RTE + G+W EDEEQ ++LK ++IISAFGS L D +++E + P+K + +G P
Sbjct: 438 IRGLELCRTEVDFDGKWTEDEEQTMRLKCDFIISAFGSGLGDGNIMEGLAPLKFNSWGLP 497
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
EV+ TM +S P VFCGGD A ++ TTVESVNDGK A+WHIHKY+Q + + + KP LP
Sbjct: 498 EVDRETMQSSEPWVFCGGDVAGVAQTTVESVNDGKQASWHIHKYLQSLHGIPISAKPMLP 557
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDM 397
+F + ID +D+SV++ G+ F NPFGLASAPPTT S+M+RR+FE GWGFA+TKTFSL KD
Sbjct: 558 QFFTEIDQIDLSVDVAGVHFINPFGLASAPPTTTSAMIRRSFEVGWGFALTKTFSLDKDC 617
Query: 398 VTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VTNVSPRIV+GTTS H +GP QG+FLNIELISEK+A
Sbjct: 618 VTNVSPRIVRGTTSGHSFGPGQGAFLNIELISEKSA 653
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/258 (67%), Positives = 205/258 (79%), Gaps = 2/258 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC++N++DW+EL+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 671 VVIASIMCSFNREDWIELAKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 730
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVRS++K+PFF KLTPN+TNI DIA+AA EG A GV+A NTVSGLM L D WP VG
Sbjct: 731 KWVRSAIKVPFFAKLTPNVTNIVDIARAAKEGGATGVTATNTVSGLMHLKGDATAWPGVG 790
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNA RP+ LKAVS+I++ FP FPIL GGIDSAD ALQF+ AGA VQI
Sbjct: 791 NDKRTTYGGVSGNAIRPIALKAVSAISRNFPGFPILATGGIDSADAALQFLHAGASVVQI 850
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPA-YQFRDKEGK 802
CS+VQNQDFTVV DYITGL+TLLY+K + L GWDGQS PT HQKGKP GK
Sbjct: 851 CSSVQNQDFTVVQDYITGLKTLLYMKGRSDLAGWDGQSKPTVRHQKGKPVDTTIPGLTGK 910
Query: 803 AIPNFGEYKKIRENLITE 820
+P+FG +K+ RE ++ E
Sbjct: 911 HLPHFGAFKEERERIVAE 928
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 83/125 (66%), Gaps = 8/125 (6%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQN--GLPKRQINTPVETILSVKDVIGQAVQ 500
+P+FG +K+ RE ++ E + V+L + P RQ+ + S+ D+IG AV
Sbjct: 912 LPHFGAFKEERERIVAE------HKKTVNLLDPANFPNRQLPPASKVPTSIADIIGLAVP 965
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
R+ Y +L NK+QVVALI+++MCINCGKCYM CNDSGYQAI F P+TH V +CTGCT
Sbjct: 966 RIGTYGDLSNKEQVVALIDEEMCINCGKCYMTCNDSGYQAIRFDPKTHLPTVNSDCTGCT 1025
Query: 561 LCLSI 565
LC S+
Sbjct: 1026 LCASV 1030
>gi|395822002|ref|XP_003784315.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Otolemur
garnettii]
Length = 1014
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 308/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP++ VNFE+EL+KDLGVKI C +SLS +IT+ L+ +GY A FIGIG P
Sbjct: 217 TSEIPQFRLPYEVVNFEIELMKDLGVKIICGKSLSANEITLSTLKDEGYQAAFIGIGLPE 276
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGLT + GFYTSK FLP VA SK G+C C LP ++GTVIVLGAGDTAF
Sbjct: 277 PNKDHIFQGLTPDQGFYTSKDFLPLVAKGSKAGMCA-CHS-PLPSIRGTVIVLGAGDTAF 334
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +IA
Sbjct: 335 DCATSALRCGARRVFVVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIAA 394
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 395 MQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPTVKEALSPIKFNRWDLPEVD 454
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + ++V +P LP F
Sbjct: 455 PETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHKYIQSQYGVSVSAQPELPLFY 514
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 515 TPIDRVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 574
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 575 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 607
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/268 (65%), Positives = 213/268 (79%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC YNKDDW+ELSK+ E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 624 NIVIASIMCGYNKDDWMELSKQAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 683
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 684 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 743
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 744 GIGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 803
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 804 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVRHQKGKPVPRIAELLGK 863
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG Y + R+ +I E + LK+ N+
Sbjct: 864 KLPSFGPYLERRKKIIAENKIRLKEQNA 891
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
L + +P+FG Y + R+ +I E + LK+ N+ L+ R P + I ++KDVI
Sbjct: 860 LLGKKLPSFGPYLERRKKIIAENKIRLKEQNAAFSPLE-----RNCYIPKKPIPAIKDVI 914
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + Y +L N +QVVA I+++MCINCGKCYM CNDSGYQAI F PETH VT+
Sbjct: 915 GRALQYLGAYGDLSNVEQVVASIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTET 974
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 975 CTGCTLCLSV 984
>gi|291398457|ref|XP_002715523.1| PREDICTED: dihydropyrimidine dehydrogenase [Oryctolagus cuniculus]
Length = 1029
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/393 (64%), Positives = 311/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP++ VNFE+EL+KDLGVK+ C +SLS ++T++ L++DGY A+FIGIG P
Sbjct: 232 TSEIPQFRLPYEVVNFEIELMKDLGVKVVCGKSLSVNEMTLQTLKEDGYKAVFIGIGLPE 291
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IF+GLT++ GFYTSK FLP VA +SK G+C C LP ++GTVIVLGAGDTAF
Sbjct: 292 PNKDHIFEGLTQDHGFYTSKDFLPLVAKASKAGMCA-CH-SPLPSIRGTVIVLGAGDTAF 349
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG NIRAVPEE++LA EEKCEF PF+SP +V VK +I
Sbjct: 350 DCATSALRCGARRVFVVFRKGFVNIRAVPEEMELAKEEKCEFFPFLSPRKVIVKGGRIVA 409
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+QF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 410 VQFVRTEQDETGKWSEDEDQIVHLKADVVISAFGSVLSDPQVKEALSPIKFNRWDLPEVD 469
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IH+YIQ + +V KP LP F
Sbjct: 470 PETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHRYIQSQFGASVSAKPELPLFY 529
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 530 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 589
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 590 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 622
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 213/269 (79%), Gaps = 3/269 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 639 NIVIASIMCSYNKSDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 698
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 699 CRWVRQAVQVPFFAKLTPNVTDIISIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 758
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 759 GIGKRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 818
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 819 VCSAVQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVLRIAELMGK 878
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNSD 829
+P+FG Y + R+ +I E + LK+ +D
Sbjct: 879 KLPSFGPYLEQRKKIIAENKIRLKEQKAD 907
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 88/127 (69%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E + LK+ +D L K+ P + + ++KDVIG+A
Sbjct: 878 KKLPSFGPYLEQRKKIIAENKIRLKEQKADFSPL-----KKNYFIPKKPVPTIKDVIGKA 932
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + Y EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTG
Sbjct: 933 LQYLGTYGELSNIEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTG 992
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 993 CTLCLSV 999
>gi|348586489|ref|XP_003479001.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Cavia
porcellus]
Length = 1019
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/393 (64%), Positives = 305/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFEVEL+KDLG+KI+C +SLS ++T+ L+KDGY A+FIGIG P
Sbjct: 222 TSEIPQFRLPYDVVNFEVELMKDLGIKIQCGKSLSVNEMTLSTLKKDGYKAVFIGIGLPE 281
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SK G+C LP + G VIVLGAGDTAF
Sbjct: 282 PKRDLIFQGLTQDQGFYTSKDFLPLVAKGSKPGMC--VCHSPLPSIWGAVIVLGAGDTAF 339
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I
Sbjct: 340 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVA 399
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 400 MQFVRTEQDETGKWSEDEDQIVCLKADMVISAFGSVLSDPAVKEALSPIKFNRWNLPEVD 459
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+WHIHKYIQ + ++ KP LP F
Sbjct: 460 PETMQTSEPWVFAGGDIVGLANTTVESVNDGKQASWHIHKYIQSQYGASISAKPELPLFY 519
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVD+SVE+ GLKF NPFGLASA P T++SM+RRAFE GW FA+TKTFSL KD+VTN
Sbjct: 520 TPIDLVDLSVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWAFALTKTFSLDKDIVTN 579
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++G TS LYGP Q SFLNIELISEKTA
Sbjct: 580 VSPRIIRGITSGPLYGPGQSSFLNIELISEKTA 612
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 209/268 (77%), Gaps = 3/268 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 629 NIVIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 688
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 689 CRWVRQAVQVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 748
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ GA +Q
Sbjct: 749 GIGKRTTYGGVSGTTIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHGGASVLQ 808
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYL S +L+ WDGQSP T HQKGKP + GK
Sbjct: 809 VCSAIQNQDFTVIEDYCTGLKALLYLMSIEELQDWDGQSPATVSHQKGKPVPPIAELTGK 868
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+P+FG + + R+ ++ E + LK+ N+
Sbjct: 869 KLPSFGPFLEQRKKIVAENKIRLKEQNT 896
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG + + R+ ++ E + LK+ N+ ++ R+ P + I S+KDVIG+A
Sbjct: 868 KKLPSFGPFLEQRKKIVAENKIRLKEQNTAFSPVE-----RRCFVPQKPIPSIKDVIGKA 922
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
++ + + +L +QVVA I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTG
Sbjct: 923 LKYLGAFGDLSTIEQVVATIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDMCTG 982
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 983 CTLCLSV 989
>gi|224057361|ref|XP_002188844.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Taeniopygia
guttata]
Length = 1162
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/392 (64%), Positives = 306/392 (78%), Gaps = 2/392 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQ+RLP+D VNFE EL+KDLGVKI + L+ +T+ L++DG+ A+FIGIG P
Sbjct: 366 SEIPQFRLPYDVVNFEAELMKDLGVKIIFRKGLAVDGMTLRTLKEDGFKAVFIGIGLPEP 425
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
N +FQGL GFYTSK FLP VA +SK G+C C LP + GTVIVLGAGDTAFD
Sbjct: 426 NRDSVFQGLRMNQGFYTSKDFLPLVAMASKPGMCA-CH-SPLPPVHGTVIVLGAGDTAFD 483
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSALRCGA +V VVFRKG T++RAVPEE++LA EEKCEFLPF+SP +V +K +I M
Sbjct: 484 CATSALRCGARRVFVVFRKGFTHVRAVPEEMELAKEEKCEFLPFLSPRKVVLKGGQIVAM 543
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
+F RTEQ+ +G W EDE+Q ++LKAN +ISAFGS L D+ V EA+ P+K +++G PE++
Sbjct: 544 EFVRTEQDSEGNWKEDEDQVVRLKANVVISAFGSVLSDSKVREAMAPIKFNRWGLPEIDP 603
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS P VF GGD L++TTVESVNDGK A+W++H+YIQ + V P LP F +
Sbjct: 604 ETMQTSEPWVFAGGDIGGLANTTVESVNDGKQASWYMHRYIQSLYGVAVSTVPELPLFYT 663
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
IDLVDISVE+ GLKFPNPFGLASA PTT+SSM+RRAFE GWGFAVTKTFSL KD+VTNV
Sbjct: 664 PIDLVDISVEMAGLKFPNPFGLASATPTTSSSMIRRAFEAGWGFAVTKTFSLDKDIVTNV 723
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SPRIV+GTTS LYGP QGSFLNIELISEKTA
Sbjct: 724 SPRIVRGTTSGPLYGPGQGSFLNIELISEKTA 755
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 204/261 (78%), Gaps = 1/261 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIMC+Y+++DW ELSK + AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 773 VLIASIMCSYSREDWTELSKMAQVAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 832
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V IPFF KLTPN+T+I IA AA EG ADGV+A NTVSGLM L AD PWPAVG
Sbjct: 833 RWVRQAVHIPFFAKLTPNVTDIVKIAMAAQEGGADGVTATNTVSGLMGLKADSTPWPAVG 892
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGG+SGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 893 RGLRTTYGGMSGNAIRPIALRAVSAIARALPGFPILATGGIDSAEAGLQFLHSGASVLQV 952
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV+DDY TGLQ LLYLKS +L+ W+GQSP T HQKGKP + D GK
Sbjct: 953 CSAIQNQDFTVIDDYCTGLQALLYLKSIEELEDWNGQSPATMCHQKGKPVPRITDLMGKK 1012
Query: 804 IPNFGEYKKIRENLITELNLK 824
+P+FG Y + R+ +I E +K
Sbjct: 1013 LPSFGPYLEQRKKIIAENKIK 1033
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 92/128 (71%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ + +P+FG Y + R+ +I E N KL + ++ + LP+++ P + I ++KDVIG+
Sbjct: 1008 LMGKKLPSFGPYLEQRKKIIAE-NKIKLKAQNMAAE--LPEKKHFVPKKPIPAIKDVIGK 1064
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
A+Q + Y +L N +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH VTD CT
Sbjct: 1065 ALQYIGTYGDLCNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPRVTDSCT 1124
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 1125 GCTLCLSV 1132
>gi|194211086|ref|XP_001490668.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Equus caballus]
Length = 1080
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/393 (64%), Positives = 307/393 (78%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ ++++GY A+FIGIG P
Sbjct: 283 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTVKEEGYKAVFIGIGLPE 342
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTAF
Sbjct: 343 PKKDQIFQGLTQDQGFYTSKDFLPLVAKGSKPGMCA-CH-SPLPSIRGAVIVLGAGDTAF 400
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V V+ +I
Sbjct: 401 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVVVRGGRIVA 460
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G W EDE+Q ++LKA+ IISAFGS L D V EA+ P+K +K+G PEV+
Sbjct: 461 MQFVRTEQDEAGNWSEDEDQIVQLKADVIISAFGSVLSDPKVKEALSPIKFNKWGLPEVD 520
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD ++TTVESVNDGK A+W IHKYIQ ++ +V KP LP F
Sbjct: 521 PETMQTSEPWVFAGGDIVGTANTTVESVNDGKQASWFIHKYIQSQHGASVAAKPELPLFY 580
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 581 TPIDLVDISVEMAGLKFVNPFGLASATPATSASMIRRAFEAGWGFALTKTFSLDKDIVTN 640
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++G TS +YGP Q SFLNIELISEKTA
Sbjct: 641 VSPRIIRGITSGPMYGPGQSSFLNIELISEKTA 673
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 170/263 (64%), Positives = 211/263 (80%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+K+ E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 690 NIVIASIMCSYNKNDWMELAKQAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 749
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 750 CRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMELKADGTPWPAV 809
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 810 GIGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 869
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 870 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIPELIGK 929
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 930 KLPSFGPYLEKRKKIIAENKIRE 952
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ +I E K+ G + +R P + I ++KDVIG+A++
Sbjct: 929 KKLPSFGPYLEKRKKIIAE---NKIREKGQNAAFPPLERNPFIPKKPIPAIKDVIGKALR 985
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y EL N + VVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 986 YLGAYGELSNTEHVVAVIDEEMCINCGKCYMTCNDSGYQAIEFDPETHLPTVTDSCTGCT 1045
Query: 561 LCLSI 565
LC S+
Sbjct: 1046 LCFSV 1050
>gi|324501269|gb|ADY40567.1| Dihydropyrimidine dehydrogenase NADP+ [Ascaris suum]
Length = 1059
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/394 (63%), Positives = 304/394 (77%), Gaps = 1/394 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKD-GYTAIFIGIGKP 99
SSEIPQ+RLP+D V+FE++L KD+GVKI R L T D+T++KL + G+ A+FIGIG P
Sbjct: 247 SSEIPQFRLPYDVVDFEIQLAKDIGVKIVTGRKLHTSDLTLKKLHNEMGFKAVFIGIGLP 306
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159
P+F + E G+YTSK+FLP VA SSK G+C GCK LP LKG VIVLGAGDTA
Sbjct: 307 EPKHDPVFNEVNESNGYYTSKSFLPMVAMSSKPGMCCGCKSTRLPSLKGHVIVLGAGDTA 366
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
DCATSALRCGAN+V +V RK +RAVPEEV+ A EE+CEF+P+M P +V+VKD +I
Sbjct: 367 MDCATSALRCGANRVTIVLRKSLNTMRAVPEEVETAREERCEFIPYMEPKKVNVKDGRIV 426
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
+ F +TEQ+ G W D++Q + LKA+Y+ISAFGSTL D V++A+ P+KL+++G PEV
Sbjct: 427 SVVFRKTEQDLDGNWYADDDQTLTLKADYVISAFGSTLGDPQVMKAMSPIKLNRWGCPEV 486
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
TT ATS P VFCGGD A +++TTVESVNDGK AAW IHKY+Q V D+P LP F
Sbjct: 487 CQTTAATSEPWVFCGGDVAGIAETTVESVNDGKVAAWSIHKYLQGLYGNDVGDEPQLPMF 546
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VDISV +CGLKF NPFGLASAPPTT+ +M RRAFE GW F +TKTFSL KD+VT
Sbjct: 547 YTPIDEVDISVNMCGLKFENPFGLASAPPTTSGAMCRRAFEQGWSFILTKTFSLDKDLVT 606
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIV+GTTS HLYGP+QGSFLNIELISEKTA
Sbjct: 607 NVSPRIVRGTTSGHLYGPQQGSFLNIELISEKTA 640
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/251 (64%), Positives = 197/251 (78%), Gaps = 5/251 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIM ++N+DDW+EL+ + E AGADALELNLSCPHGMGERGMGLACGQDP MVR+I
Sbjct: 658 IIIASIMASFNQDDWIELASRAEAAGADALELNLSCPHGMGERGMGLACGQDPNMVRSIC 717
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVRS+V+IPFF K+TPN+T+I IAKAA +G ADGV+A NTVSGLMSL DG+ WP+VG
Sbjct: 718 QWVRSAVEIPFFAKMTPNVTDIRTIAKAAKDGNADGVTATNTVSGLMSLKEDGSAWPSVG 777
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSG+A RP+ L+AVS+IA P FPIL GGI+SA+ LQF+ AGA +Q+
Sbjct: 778 VERRTTYGGVSGSAIRPIALRAVSAIANALPGFPILATGGIESAETGLQFLHAGASVLQV 837
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQD+T++DDY TGL+ LLYL + LK W+GQSPP HQ GKP
Sbjct: 838 CSAVQNQDYTLIDDYCTGLRALLYLSGVKSLKDWNGQSPPVQKHQLGKPIL----IHNMH 893
Query: 804 IPNFGEYKKIR 814
IPNFG+Y+K R
Sbjct: 894 IPNFGKYRKQR 904
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 90/125 (72%), Gaps = 7/125 (5%)
Query: 443 IPNFGEYKKIRENLITEL--NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
IPNFG+Y+K R +L N+ L+S Q R N P E I ++ ++IG+++
Sbjct: 894 IPNFGKYRKQRAQREQQLLRNVDLLDS----TQTEFSTRPDNRP-EHIPTINEIIGKSLP 948
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
++ +Y +LDNK+QVVALI+DD+CINCGKCYM CNDSGYQAITF ETH+A VTD+CTGCT
Sbjct: 949 QIGSYGDLDNKQQVVALIDDDLCINCGKCYMVCNDSGYQAITFDKETHRAFVTDDCTGCT 1008
Query: 561 LCLSI 565
LC S+
Sbjct: 1009 LCYSV 1013
>gi|195130537|ref|XP_002009708.1| GI15089 [Drosophila mojavensis]
gi|193908158|gb|EDW07025.1| GI15089 [Drosophila mojavensis]
Length = 1035
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 307/393 (78%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP D VNFE++LVKD+GVK E +R+LST+D+TI+ L G+ A+F+GIG P
Sbjct: 226 AAEIPQYRLPIDVVNFEIDLVKDVGVKFEMQRALSTKDLTIQGLLSSGHDAVFVGIGLPE 285
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF+GL+ + GF+TSK FLP V+ SK GLC ++LP L G VIVLGAGDTAF
Sbjct: 286 PKIDPIFKGLSTQSGFFTSKNFLPLVSDGSKPGLCACKSAQALPKLYGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG T IRAVPEEV+LA EE+CE +P++SP +V VKD +I G
Sbjct: 346 DCATSALRCGARRVFVVFRKGSTGIRAVPEEVELAREERCELMPYLSPRKVIVKDGQITG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE+ EWVEDEEQ ++LKAN++ISAFGS L D DV EA+ P++ + G P V+
Sbjct: 406 MEFCRTEQNEQDEWVEDEEQTVRLKANFVISAFGSGLQDADVKEALAPLEF-RGGLPVVD 464
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SVP VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 465 RKTMQSSVPQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 521
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT+++M+RR+FE GWGF VTKTF L KDMVTN
Sbjct: 522 TDIDSVDISVEMCGLKFENPFGLASAPPTTSAAMIRRSFEQGWGFVVTKTFGLDKDMVTN 581
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 582 VSPRIVRGTTSGYRYGPQQGCFLNIELISEKRA 614
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/266 (63%), Positives = 205/266 (77%), Gaps = 5/266 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC YN+ DW EL+ + E++GADALELNLSCPHGMGE GMGLACGQ+P +V +IS
Sbjct: 632 IIIASIMCGYNEADWTELATRAEQSGADALELNLSCPHGMGESGMGLACGQEPRLVEDIS 691
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VKIPFF+KLTPNIT+I IAKAA+ G A+G SAINTV GLMSL ADG WPA+G
Sbjct: 692 RWVRKAVKIPFFIKLTPNITDIVSIAKAAHRGGANGGSAINTVQGLMSLKADGTAWPAIG 751
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
++ TTYGGVSGNATRPM L+A+S IA+ P +F ILGIGGIDS +VALQFIQAGA +Q
Sbjct: 752 KEQRTTYGGVSGNATRPMALRAISEIARALPKDFVILGIGGIDSGEVALQFIQAGATVLQ 811
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKG----WDGQSPPTPVHQKGKPAYQFRDK 799
+CS+VQNQDFT+++DY T L+ LLYLK+ WDGQSPPTPVHQKGKP
Sbjct: 812 VCSSVQNQDFTLIEDYCTSLKALLYLKANPPPNNGAFWDGQSPPTPVHQKGKPVVHLTGS 871
Query: 800 EGKAIPNFGEYKKIRENLITELNLKK 825
+ + FG Y++ R+ + EL +K
Sbjct: 872 GNQTLGFFGPYQQQRDIKLAELRKEK 897
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 441 QAIPNFGEYKKIRENLITELNLKK---LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
Q + FG Y++ R+ + EL +K +++ ++ P I + + DVIG
Sbjct: 874 QTLGFFGPYQQQRDIKLAELRKEKGALWDAERTTVDTSNPGAVIKPAPK----ITDVIGA 929
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
A+ R+ Y LDNK+Q VALINDDMCINCGKCYM C DSGYQAI F +TH HV D+CT
Sbjct: 930 ALPRIGPYKSLDNKQQKVALINDDMCINCGKCYMTCADSGYQAIEFDKDTHLPHVNDDCT 989
Query: 558 GCTLCLSI 565
GCTLC+S+
Sbjct: 990 GCTLCVSV 997
>gi|312383321|gb|EFR28456.1| hypothetical protein AND_03577 [Anopheles darlingi]
Length = 1672
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/396 (63%), Positives = 306/396 (77%), Gaps = 8/396 (2%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP D VNFEV+LVKDLGV+ E RSLS RD+T+ L +DG A+F+GIG P
Sbjct: 856 SSEIPQYRLPVDVVNFEVQLVKDLGVRFELGRSLSARDLTVRGLLQDGADAVFLGIGLPE 915
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGG-CKKESLPILKGTVIVLGAGDTA 159
+ P+F+GL E GFYTSK+FLP+V++ SK LC +LP L G VIVLGAGDTA
Sbjct: 916 PKIDPVFRGLGIEHGFYTSKSFLPKVSSGSKACLCAATAASATLPKLSGNVIVLGAGDTA 975
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN--- 216
FDCATSALRCGA +V VVFRKG NIRAVPEEV+LA EE+CEF+PFM+P +V +D
Sbjct: 976 FDCATSALRCGARRVFVVFRKGNNNIRAVPEEVELAREERCEFIPFMAPKRVLRQDGERE 1035
Query: 217 -KIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
+I G++ RTEQ++ G W+ DEEQ +LKANYIISAFGS L D D +EA+ +KL++YG
Sbjct: 1036 GRIVGLELCRTEQDDDGHWIVDEEQTTRLKANYIISAFGSGLYDPDTIEALAGIKLNRYG 1095
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPC 335
PEV+ T TS+ GVFCGGD A ++TTVESVNDGKTAAW++H +Q L K
Sbjct: 1096 LPEVDPETQQTSLAGVFCGGDLAGAAETTVESVNDGKTAAWYMHCQLQ---GLPFDGKVE 1152
Query: 336 LPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQK 395
LP F + ID VD+SVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGFAVTKTF+L K
Sbjct: 1153 LPLFYTPIDAVDLSVEVCGVRFENPFGLASAPPTTSTAMIRRAFEQGWGFAVTKTFALDK 1212
Query: 396 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEK 431
D+VTNVSPRIV+G T+ H YGP+QG+FLNIELISEK
Sbjct: 1213 DVVTNVSPRIVRGVTAGHSYGPQQGAFLNIELISEK 1248
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/265 (68%), Positives = 209/265 (78%), Gaps = 7/265 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIMCTYN+ DW EL+++ E AGAD LELNLSCPHGMGE GMGLACGQDPE+V NIS
Sbjct: 1268 VLIASIMCTYNEQDWTELARRAETAGADMLELNLSCPHGMGESGMGLACGQDPELVYNIS 1327
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
+WVR +V+IPFFVKLTPNIT+I IA+AA G+ADGVSAINTV GLMSL DG PWPAVG
Sbjct: 1328 VWVRRAVRIPFFVKLTPNITDIVAIAQAAQRGQADGVSAINTVQGLMSLRTDGTPWPAVG 1387
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNATRP L+AVS I P FPI GIGGIDSADVALQFIQ GA +QI
Sbjct: 1388 IHKRTTYGGVSGNATRPQALRAVSLIGNKLPGFPICGIGGIDSADVALQFIQCGAPILQI 1447
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLK-----STQL--KGWDGQSPPTPVHQKGKPAYQFR 797
CS+VQNQDFTV++DY+TGL+ LLYLK +T L GWDGQSPPT QKGKP R
Sbjct: 1448 CSSVQNQDFTVIEDYVTGLKALLYLKANPPPATGLDGAGWDGQSPPTGKLQKGKPVVPLR 1507
Query: 798 DKEGKAIPNFGEYKKIRENLITELN 822
D +G+ + +FGEYK+ RE + +L
Sbjct: 1508 DADGRTVLHFGEYKRRREAEVAKLR 1532
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 441 QAIPNFGEYKKIRENLITELN-----LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVI 495
+ + +FGEYK+ RE + +L L + D V+ + LP ++ + ++DV+
Sbjct: 1512 RTVLHFGEYKRRREAEVAKLRQQHGPLWEPCPDTVA--DALP----DSTEKVAPRIRDVL 1565
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G A+ R+ +Y LDN KQVVALI+DD+CINCGKCYM C DSGYQAI+F +TH HVTD+
Sbjct: 1566 GAALPRIGDYKRLDNTKQVVALIDDDLCINCGKCYMTCADSGYQAISFDSQTHLPHVTDD 1625
Query: 556 CTGCTLCLSI 565
CTGC LCLS+
Sbjct: 1626 CTGCNLCLSV 1635
>gi|449268103|gb|EMC78973.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Columba livia]
Length = 919
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 304/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE EL+KDLGVKI + L+ +T+ L++DGY +FIGIG P
Sbjct: 122 TSEIPQFRLPYDVVNFEAELMKDLGVKIVFSKGLAMDGMTLRTLKEDGYEVVFIGIGLPE 181
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IFQGL + GFYTSK FLP VA +SK G+C C LP + GTVIVLGAGDTAF
Sbjct: 182 PNKDSIFQGLRMDQGFYTSKDFLPLVAMASKPGMCA-CHS-PLPAIHGTVIVLGAGDTAF 239
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE++LA EEKCEFLPF+SP +V ++ +I G
Sbjct: 240 DCATSALRCGARRVFVVFRKGFTNIRAVPEEMELAKEEKCEFLPFLSPRKVVLRGGQIVG 299
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ++ G W EDE+Q + LKA+ +ISAFGS L D V EA+ PVK +++G PEV+
Sbjct: 300 MQFVRTEQDDDGNWKEDEDQIVHLKADVVISAFGSILSDKKVREAMAPVKFNRWGLPEVD 359
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD L++TTVESVNDGK A+W++H+YIQ + + V P LP F
Sbjct: 360 PETMQTSEPWVFAGGDIGGLANTTVESVNDGKQASWYMHRYIQSLHGVAVSPVPELPLFY 419
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+ GLKF NPFGLASA PTT+SSM+RRAFE GWGFAVTKTFSL KD+VTN
Sbjct: 420 TPIDSVDISVEMAGLKFQNPFGLASATPTTSSSMIRRAFEAGWGFAVTKTFSLDKDIVTN 479
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+G TS +YGP QGSFLNIELISEKTA
Sbjct: 480 VSPRIVRGITSGPIYGPGQGSFLNIELISEKTA 512
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 173/261 (66%), Positives = 206/261 (78%), Gaps = 1/261 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIAS+MC+Y+K+DW ELSK E AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 530 ILIASVMCSYSKEDWTELSKMAEVAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 589
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFF KLTPN+T+I +IA AA EG ADGV+A NTVSGLM L AD PWPAVG
Sbjct: 590 RWVRQAVQIPFFAKLTPNVTDIVNIAMAAQEGGADGVTATNTVSGLMGLKADSTPWPAVG 649
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSG+A RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 650 AGLRTTYGGVSGSAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 709
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV+DDY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + D GK
Sbjct: 710 CSAIQNQDFTVIDDYCTGLRALLYLKSIEELEDWDGQSPATMRHQKGKPVPRIADLMGKK 769
Query: 804 IPNFGEYKKIRENLITELNLK 824
+P+FG Y + R+ +I E +K
Sbjct: 770 LPSFGPYLEQRKKIIAENKIK 790
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 90/128 (70%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ + +P+FG Y + R+ +I E N KL S+ LP+++ P + I S+KDVIG+
Sbjct: 765 LMGKKLPSFGPYLEQRKKIIAE-NKIKLKEQ--SMAAMLPQKRHFIPKKPIPSIKDVIGK 821
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
A+Q + Y EL N +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH VTD CT
Sbjct: 822 ALQYIGTYGELCNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDSCT 881
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 882 GCTLCLSV 889
>gi|195393212|ref|XP_002055248.1| GJ18897 [Drosophila virilis]
gi|194149758|gb|EDW65449.1| GJ18897 [Drosophila virilis]
Length = 1031
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/393 (64%), Positives = 303/393 (77%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP D VNFE++LVKDL VK E +RSLST+D+TI+ L G+ AIF+GIG P
Sbjct: 226 SAEIPQYRLPIDVVNFEIDLVKDLDVKFELQRSLSTKDLTIQGLLSSGHDAIFVGIGLPE 285
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL + GFYTSK FLP V+ SK GLC +SLP L G VIVLGAGDTAF
Sbjct: 286 PKIDPIFNGLNTQTGFYTSKNFLPLVSDGSKPGLCACKSAQSLPKLYGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA EE+CE +P++SP +V VKD +I
Sbjct: 346 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELAREERCEMMPYLSPRKVIVKDGQITA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQN++ EWVEDEEQ ++LKAN++ISAFGS L D DV +A+ P+ L + G P V+
Sbjct: 406 MEFCRTEQNDQDEWVEDEEQTVRLKANFVISAFGSGLQDPDVKDALSPL-LFRSGLPVVD 464
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SVP VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 465 RQTMQSSVPQVFIGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 521
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KDMVTN
Sbjct: 522 TDIDNVDISVEMCGLKFENPFGLASAPPTTSAAMIRRAFEQGWGFVVTKTFGLDKDMVTN 581
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 582 VSPRIVRGTTSGYRYGPQQGCFLNIELISEKRA 614
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 205/265 (77%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC YN+ DW EL+ K EK+GADALELNLSCPHGMGE GMGLACGQ+P++V +IS
Sbjct: 632 IIIASIMCGYNEADWTELAIKAEKSGADALELNLSCPHGMGESGMGLACGQEPKLVEDIS 691
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA+AA G ADG SAINTV GLMSL AD WPAVG
Sbjct: 692 RWVRKAVKVPFFIKLTPNITDIVSIAQAAQRGGADGGSAINTVQGLMSLKADATAWPAVG 751
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRP+ L+AVS IAK P F ILGIGGIDS +VALQF+QAGA +QI
Sbjct: 752 KEQRTTYGGVSGNATRPIALRAVSEIAKKLPGFAILGIGGIDSGEVALQFLQAGATVLQI 811
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFT++DDY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP
Sbjct: 812 CSSVQNQDFTLIDDYCTSLKALLYLKANPPPVNGAFWDGQSPPTPVHQKGKPVVHLTGSG 871
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ + FG Y++ R+ + +L +K
Sbjct: 872 NQTLGFFGPYQQQRDIKLADLRKQK 896
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q + FG Y++ R+ I +L+K Q + V+ + DVIG A+
Sbjct: 873 QTLGFFGPYQQQRD--IKLADLRKQKGAFWDAQQATVDATSSADVKPAPKITDVIGAALP 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
R+ Y LDNK+Q VALINDDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCT
Sbjct: 931 RIGAYKSLDNKQQKVALINDDMCINCGKCYMTCADSGYQAIEFDKDTHLPHVNDDCTGCT 990
Query: 561 LCLSI 565
LC+S+
Sbjct: 991 LCVSV 995
>gi|27806651|ref|NP_776466.1| dihydropyrimidine dehydrogenase [NADP(+)] [Bos taurus]
gi|2498309|sp|Q28007.1|DPYD_BOVIN RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|677951|gb|AAB40985.1| dihydropyrimidine dehydrogenase [Bos taurus]
Length = 1025
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 305/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C L I +GTVIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CHSPLLSI-RGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEVELAREEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G+W ED +Q LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 406 MQFVRTEQDETGKWNEDGDQIACLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVE+VNDGK A+W+IH+YIQ + +V KP LP F
Sbjct: 466 PETMQTSEPWVFAGGDVVGIANTTVEAVNDGKQASWYIHRYIQSQYGASVSAKPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ LKF NPFGLASA PTT+SSM+RRAFE GW FA+TKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVEMAALKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 210/267 (78%), Gaps = 3/267 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN++DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ GA +Q
Sbjct: 755 GREKRTTYGGVSGTAIRPIALRAVTTIARALPEFPILATGGIDSAESGLQFLHGGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFT++ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + GK
Sbjct: 815 VCSAIQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQSPATKSHQKGKPVPCIAELVGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + + +I E L LKK N
Sbjct: 875 KLPSFGPYLEKCKKIIAEEKLRLKKEN 901
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + + +I E L LKK N + L+ R P + I SVKDVIG+A
Sbjct: 874 KKLPSFGPYLEKCKKIIAEEKLRLKKENVTVLPLE-----RNHFIPKKPIPSVKDVIGKA 928
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + Y EL+N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTG
Sbjct: 929 LQYLGTYGELNNTEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTG 988
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 989 CTLCLSV 995
>gi|47086253|ref|NP_998058.1| dihydropyrimidine dehydrogenase [NADP(+)] [Danio rerio]
gi|82185925|sp|Q6NYG8.1|DPYD_DANRE RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|42793999|gb|AAH66602.1| Dihydropyrimidine dehydrogenase [Danio rerio]
Length = 1022
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 311/393 (79%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP++ V FE++L+KDLGVK+ E+ L +T+ L+++GY ++IGIG P
Sbjct: 228 TSEIPQFRLPYEVVQFEIDLMKDLGVKVVLEKGLGQNGLTLTSLKEEGYQVVYIGIGLPQ 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
AN IF+GLT E GFYTSK FLP VA +SK G+C C+ + LP L G VIVLGAGDTAF
Sbjct: 288 ANRDKIFEGLTTEQGFYTSKDFLPLVAKASKIGMCN-CRSQ-LPKLHGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE++ A EEKCEFLPF+SP +V K+ +++G
Sbjct: 346 DCATSALRCGARRVFVVFRKGFTNIRAVPEEMEAAKEEKCEFLPFLSPHEVIKKNGRVSG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ + G W+ DEEQ + LKA++IISAFGS L D V +A+ P+KL+++G PEVN
Sbjct: 406 LRFCRTEQQDDGTWIVDEEQIVHLKADFIISAFGSMLNDPAVTKALDPIKLNRWGTPEVN 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM T+ P VF GGD A ++TTVESVNDGK A+WHIHKYIQ + T+ P LP F
Sbjct: 466 SETMQTTEPWVFAGGDIAGFANTTVESVNDGKQASWHIHKYIQSLHGNTISATPRLPLFH 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
ID VDISVE+CG+KFPNPFGLASAPPTT+++M+RRAFE GWGFA+TKTF L KD+VTN
Sbjct: 526 CSIDTVDISVEMCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFALTKTFGLDKDLVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS H++GP QGSFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGHIFGPGQGSFLNIELISEKTA 618
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/277 (62%), Positives = 207/277 (74%), Gaps = 3/277 (1%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN+ DW EL+K +++ ADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIIIASIMCSYNQADWTELAKMAQESQADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR + IPFF KLTPN+TNI DIA AAYEG ADGV+A NTVSGLM+L AD PWP +
Sbjct: 695 CRWVRKATSIPFFAKLTPNVTNIVDIATAAYEGGADGVTATNTVSGLMALKADATPWPGI 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ AGA +Q
Sbjct: 755 GRGARTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHAGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV++DY GL+ LLYLKS +L WDGQSPPT HQKGKP + GK
Sbjct: 815 VCSAVQNQDFTVIEDYCLGLKALLYLKSIEELHDWDGQSPPTIRHQKGKPVPHVSELIGK 874
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPR 839
++P+FG Y + + + + KK S V + G R
Sbjct: 875 SLPSFGPYLQTKTQALAK--YKKDASGDVIMDTGAAR 909
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 85/125 (68%), Gaps = 4/125 (3%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+++P+FG Y + + + + KK S V + G + +N P + I +VKDVI +A++
Sbjct: 874 KSLPSFGPYLQTKTQALAKY--KKDASGDVIMDTGAAR--VNIPKKPIPNVKDVIARALK 929
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y ELDN +QV AL++ +MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 930 HIGAYQELDNTEQVQALVDPEMCINCGKCYMTCNDSGYQAIKFDPETHLPVITDSCTGCT 989
Query: 561 LCLSI 565
LCLS+
Sbjct: 990 LCLSV 994
>gi|363736857|ref|XP_426639.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Gallus gallus]
Length = 1025
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/393 (63%), Positives = 303/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE EL+KDLGVKI + L+ +T+ L++DGY A+FIGIG P
Sbjct: 228 ASEIPQFRLPYDVVNFEAELMKDLGVKIIYSKGLAVDGMTLRTLKEDGYEAVFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N +FQGL + GFYTSK FLP VA +SK G+C C+ LP + GTVIVLGAGDTAF
Sbjct: 288 PNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGMCA-CQS-PLPSIHGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE++LA EE+CEFLPF+SP +V ++ I
Sbjct: 346 DCATSALRCGARRVFVVFRKGFTNIRAVPEEMELAKEERCEFLPFLSPRKVVLRSGHIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ G W EDE+Q ++LKA+ +ISAFGS L D+ V+EA+ P+K +++G PEV+
Sbjct: 406 MEFVRTEQGSDGNWKEDEDQVVRLKADVVISAFGSVLSDSKVIEAMTPIKFNRWGLPEVD 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD + ++TTVESVNDGK A+W++H+YIQ V P LP F
Sbjct: 466 PETMQTSEPWVFAGGDISGHANTTVESVNDGKQASWYMHRYIQSLYGAVVSTTPELPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISV + GLKFPNPFG+ASA P T+SSM+RRAFE GWGFAVTKTFSL KD+VTN
Sbjct: 526 TPIDLVDISVLMAGLKFPNPFGIASATPATSSSMIRRAFEAGWGFAVTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+G TS +YGP QGSFLNIELISEKTA
Sbjct: 586 VSPRIVRGVTSGPIYGPGQGSFLNIELISEKTA 618
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 209/269 (77%), Gaps = 2/269 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+Y+KDDW ELSK E AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 636 ILIASIMCSYSKDDWTELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 695
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFF KLTPN+T+I +IA AA EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 696 RWVRQAVQIPFFAKLTPNVTDIVNIAVAAQEGGADGVTATNTVSGLMGLKADGTPWPAVG 755
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 756 AGLRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 815
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV+DDY TGL+ LLYLKS +L+ W+GQSP T HQKGKP D GK
Sbjct: 816 CSAIQNQDFTVIDDYCTGLRALLYLKSIEELEDWNGQSPTTMRHQKGKPVSGIADLIGKK 875
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVS 832
+P+FG Y + R+ +I E N KL G +
Sbjct: 876 LPSFGPYLEQRKKIIAE-NKMKLKEQGTA 903
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y + R+ +I E N KL G + LP+++ P + I ++KDVIG+A+Q +
Sbjct: 876 LPSFGPYLEQRKKIIAE-NKMKLKEQGTAAV--LPEKKHFIPKKPIPAIKDVIGKALQYI 932
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y EL N +QVVALI+++MCINCGKCYM CNDSGYQAI F ETH VTD CTGCTLC
Sbjct: 933 GTYGELCNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDAETHLPTVTDSCTGCTLC 992
Query: 563 LSI 565
LS+
Sbjct: 993 LSV 995
>gi|359319777|ref|XP_537061.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Canis lupus
familiaris]
Length = 1143
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/392 (64%), Positives = 307/392 (78%), Gaps = 2/392 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQ+RLP+DAVNFE+EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P+
Sbjct: 346 SEIPQFRLPYDAVNFEIELMKDLGVKIICGKSLSVNEITLSTLKEEGYKAAFIGIGLPDP 405
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
N IF+ LT+ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAFD
Sbjct: 406 NKNSIFKDLTQNHGFYTSKDFLPLVAKSSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAFD 463
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSAL CGA +V +VFRKG NIRAVPEEV+LA E+KCEFLPF+SP +V++K +I +
Sbjct: 464 CATSALCCGARRVFIVFRKGFVNIRAVPEEVELAKEKKCEFLPFLSPRKVELKGGRIVAV 523
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
QF RTEQ+E G W E E++ ++LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 524 QFVRTEQDEAGNWHEHEDETVRLKADVVISAFGSVLSDPTVKEALSPLKFNRWNLPEVDP 583
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F +
Sbjct: 584 ETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHKYIQSQYGASVCAKPELPLFYT 643
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNV
Sbjct: 644 PIDLVDISVEMAGLKFLNPFGLASATPATSASMIRRAFEAGWGFALTKTFSLDKDIVTNV 703
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 704 SPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 735
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 172/263 (65%), Positives = 210/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+Y+K+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 752 NIVIASIMCSYSKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 811
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 812 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 871
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 872 GIEKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 931
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 932 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELRDWDGQSPATVSHQKGKPVPRIAELMGK 991
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 992 KLPSFGPYLEQRKEIIAENKIRQ 1014
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVI 495
+ + +P+FG Y + R+ +I E +++ + G P +R+ P + I ++KDVI
Sbjct: 988 LMGKKLPSFGPYLEQRKEIIAENKIRQKEQNA-----GFPPLERKHFIPKKPIPTIKDVI 1042
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD
Sbjct: 1043 GKALQYLGAFGELSNLEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDS 1102
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 1103 CTGCTLCLSV 1112
>gi|91092056|ref|XP_970271.1| PREDICTED: similar to dihydropyrimidine dehydrogenase [Tribolium
castaneum]
gi|270004691|gb|EFA01139.1| hypothetical protein TcasGA2_TC010364 [Tribolium castaneum]
Length = 1016
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/393 (64%), Positives = 305/393 (77%), Gaps = 6/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQYRLP VNFE++LVKDLGVKIE RSLS DIT+EKL KD A+F+GIG P
Sbjct: 223 TSEIPQYRLPISVVNFEIQLVKDLGVKIETGRSLSKHDITLEKLLKDA-KAVFVGIGLPQ 281
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F+ LT +MGFYTSK FLPRVA +SK G+C K +LP LKGTVIVLGAGDTAF
Sbjct: 282 PKLNPLFKNLTPDMGFYTSKDFLPRVAKASKPGVC--LCKATLPRLKGTVIVLGAGDTAF 339
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFR+G TNIRAVPEEV LA EEKCE + F+SP +V+VKD KI
Sbjct: 340 DCATSALRCGARKVFVVFRRGFTNIRAVPEEVSLAVEEKCELVGFLSPHKVNVKDGKIVS 399
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
+ F+RTEQ+E G+WV+D EQ +KANY+ISAFGS L D V+EA+KP+K P V+
Sbjct: 400 VTFSRTEQDESGQWVQDPEQLTTIKANYLISAFGSGLEDPAVVEALKPLKFTDQNLPSVD 459
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +S V+ GGD A +++TTVE+VNDGKTAAW++H Y++ L + P LP F
Sbjct: 460 LNTMQSSHTSVWVGGDLAGVAETTVEAVNDGKTAAWYMHCYLE---GLPLTTSPKLPLFY 516
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVE+CG+KF NPFGLASAPP T ++M+RRAFE GW + VTKTFSL KD+VTN
Sbjct: 517 TEIDNVDLSVEMCGIKFENPFGLASAPPATTTAMIRRAFEQGWAYTVTKTFSLDKDLVTN 576
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTT+ H YGP+QGSFLNIELISEK A
Sbjct: 577 VSPRIVRGTTAGHNYGPQQGSFLNIELISEKCA 609
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/277 (68%), Positives = 222/277 (80%), Gaps = 9/277 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC+YN+ DW LSK E AGADALELNLSCPHGMGE GMGLACGQ PE+V+ IS
Sbjct: 627 IVIASIMCSYNEQDWKTLSKMAEDAGADALELNLSCPHGMGESGMGLACGQKPELVKGIS 686
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF+KLTPNITNI DIA AAYEG ADGV+AINTVSGLM LSA+G+PWPAVG
Sbjct: 687 QWVRATVKIPFFIKLTPNITNIVDIATAAYEGGADGVAAINTVSGLMGLSANGSPWPAVG 746
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNATRPMGL+AVS++A P F I+GIGGIDSADVALQ++QAGA VQ+
Sbjct: 747 LDKRTTYGGVSGNATRPMGLRAVSAVANALPGFAIMGIGGIDSADVALQYLQAGATVVQV 806
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAI 804
CSA+QNQDFT++DDY TGL+ LLYL +L WDGQSPPT HQKGKP R+ E KA+
Sbjct: 807 CSAIQNQDFTLIDDYCTGLKALLYLDG-RLPRWDGQSPPTFKHQKGKPVVSIRN-EDKAL 864
Query: 805 PNFGEYKKIRENLITELNLKK---LNSDGVSLQNGLP 838
P+FG Y K RE + N+K+ L+ +G +NG P
Sbjct: 865 PHFGPYLKEREEKMK--NVKQEIILHHNG--RENGYP 897
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 8/128 (6%)
Query: 441 QAIPNFGEYKKIRENLITELNLKK---LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+A+P+FG Y K RE + N+K+ L+ +G +NG P + P + + +++G+
Sbjct: 862 KALPHFGPYLKEREEKMK--NVKQEIILHHNG--RENGYPINGVQVP-SMVPKINEIVGR 916
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
A+ ++ Y +LDN KQVVALI+DDMCINCGKCYM CNDSGYQAI F P+TH V D+CT
Sbjct: 917 ALPKIGAYKKLDNTKQVVALIDDDMCINCGKCYMTCNDSGYQAINFDPKTHIPTVNDDCT 976
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 977 GCTLCLSV 984
>gi|198471457|ref|XP_001355634.2| GA15293 [Drosophila pseudoobscura pseudoobscura]
gi|198145925|gb|EAL32693.2| GA15293 [Drosophila pseudoobscura pseudoobscura]
Length = 1027
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 304/393 (77%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP D VNFE++LV+DLGV I+ RSLST+D+T++ L G A+F+GIG P
Sbjct: 223 AAEIPQYRLPIDVVNFEIQLVQDLGVCIKTNRSLSTKDLTVQGLLDSGLDAVFVGIGLPE 282
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF+GL + GFYTSK FLP V+ SK GLC +SLP L G VIVLGAGDTAF
Sbjct: 283 PKLNPIFEGLDVDAGFYTSKNFLPLVSDGSKPGLCACKASQSLPKLHGNVIVLGAGDTAF 342
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA EE+CE LP++SP +V VKD I G
Sbjct: 343 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELAREERCEMLPYLSPRKVCVKDGLITG 402
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE+ EWVEDE+Q ++LKAN++ISAFGS L D DV EA+ P+K + P V+
Sbjct: 403 MEFCRTEQNEQDEWVEDEDQTVRLKANFVISAFGSGLQDPDVREALSPLKF-RGELPVVD 461
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TTM +S P VF GGD A +++TTVESVNDGK AAW IH ++Q+ L + LP F
Sbjct: 462 RTTMQSSQPQVFIGGDLAGVANTTVESVNDGKVAAWSIHCHLQD---LPLDTPAALPLFY 518
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 519 TDIDSVDISVEMCGLKFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 578
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 579 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 611
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/255 (69%), Positives = 203/255 (79%), Gaps = 5/255 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N+ DW ELS K E +GADALELNLSCPHGMGERGMGLACGQ P+MV IS
Sbjct: 629 IVIASIMCSFNEADWTELSIKAEASGADALELNLSCPHGMGERGMGLACGQIPDMVEQIS 688
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VK+PFF+KLTPNIT+IT IAKAA G ADG SAINTV GLM L AD WPAVG
Sbjct: 689 RWVRNAVKLPFFIKLTPNITDITAIAKAAKLGGADGCSAINTVQGLMGLKADATAWPAVG 748
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRPM L+A+S IAK P+FPILGIGGIDS +VALQF+QAGA +QI
Sbjct: 749 EEKRTTYGGVSGNATRPMALRAISEIAKKIPDFPILGIGGIDSGEVALQFLQAGATVLQI 808
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFT++DDY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP
Sbjct: 809 CSSVQNQDFTLIDDYCTSLKALLYLKANPPPVNGAFWDGQSPPTPVHQKGKPVVHLTGV- 867
Query: 801 GKAIPNFGEYKKIRE 815
GK + FG Y+K R+
Sbjct: 868 GKKLGFFGPYQKERD 882
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 60/75 (80%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
V D+IG A+ R+ Y +LDNK+Q VALINDDMCINCGKCYM C DSGYQAI F +TH
Sbjct: 918 VADIIGAALPRIGTYNQLDNKQQKVALINDDMCINCGKCYMTCADSGYQAIKFDKDTHLP 977
Query: 551 HVTDECTGCTLCLSI 565
HV D+CTGCTLC+S+
Sbjct: 978 HVNDDCTGCTLCVSV 992
>gi|357623930|gb|EHJ74888.1| dihydropyrimidine dehydrogenase [Danaus plexippus]
Length = 1025
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/392 (64%), Positives = 304/392 (77%), Gaps = 7/392 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQYRLP+D V FE++L++DLGVK R LST DIT+ L KDGY A+F+GIG P
Sbjct: 225 SSEIPQYRLPYDVVQFEIDLIRDLGVKFVTGRKLSTSDITVNGLFKDGYDAVFLGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IPIF+ LT EMGFYTSK FLP V+ SK+GLC C SLP+L GTV+VLGAGDTAF
Sbjct: 285 PKSIPIFENLTPEMGFYTSKQFLPLVSRGSKRGLCS-C--SSLPVLSGTVLVLGAGDTAF 341
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA KV VVFRKG T+IRAVPEEV LA EEKCEF+PFMSP +V V++ KI
Sbjct: 342 DCATSALRCGAKKVFVVFRKGITHIRAVPEEVDLAKEEKCEFIPFMSPREVIVRNGKITA 401
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++ RTEQ + GEW ED +Q ++LKA++IISAFGS L D DV +A+ VKL+ +G PE++
Sbjct: 402 LKMFRTEQLDDGEWFEDPDQVLQLKADFIISAFGSGLYDEDVKQAMDGVKLNSWGLPEID 461
Query: 281 YTTM-ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
T M ++S P VF GGD A ++DTTVESVNDGKTAAW++H Y+Q + LPKF
Sbjct: 462 NTCMQSSSNPKVFVGGDLAGVADTTVESVNDGKTAAWYMHCYLQ---GIPFSAAIELPKF 518
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VD+SVE+CG++F NPFGLASAPPTT+S+M+RRAF GWGF VTKTF L KD+VT
Sbjct: 519 HTDIDEVDLSVEVCGIRFENPFGLASAPPTTSSAMIRRAFTQGWGFVVTKTFGLDKDIVT 578
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEK 431
NVSPRIV+G TS YGP QGSFLNIELISEK
Sbjct: 579 NVSPRIVRGVTSGENYGPGQGSFLNIELISEK 610
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/265 (68%), Positives = 214/265 (80%), Gaps = 3/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC+YN+DDW EL++K E +GADALELNLSCPHGMGE GMGLACGQDP +V+ IS
Sbjct: 630 VIIASIMCSYNEDDWTELARKAEASGADALELNLSCPHGMGESGMGLACGQDPVLVKGIS 689
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++ IPFFVKLTPNIT+I IA AAYEG A GVSAINTVSGLM++ AD PWP VG
Sbjct: 690 QWVRKAINIPFFVKLTPNITDIVSIATAAYEGGASGVSAINTVSGLMTVRADATPWPQVG 749
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRPMGL+AVS+IA P FPILGIGGIDSAD ALQF+ GA VQI
Sbjct: 750 REKSTTYGGVSGNATRPMGLRAVSAIANKLPGFPILGIGGIDSADSALQFMLCGAPVVQI 809
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAI 804
CSAVQNQDFTVV+DY+TGL+ LLYL+S L+GW GQSPPT HQKGKP D+ GK +
Sbjct: 810 CSAVQNQDFTVVEDYVTGLKALLYLRSRGLQGWTGQSPPTNKHQKGKPVQTICDENGKVL 869
Query: 805 PNFGEYKKIRENLITELNLKKLNSD 829
+FG Y K RE ++ E ++LN++
Sbjct: 870 AHFGPYIKKREGVLHE---QRLNTN 891
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNG-LPKRQINTPVETILSVKDVIGQAV 499
+ + +FG Y K RE ++ E ++LN++ ++ P+R +N + ++DV+G+A+
Sbjct: 867 KVLAHFGPYIKKREGVLHE---QRLNTNILADNTTECPRRNVNGH-NKVPRIRDVVGEAL 922
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGC 559
R+++Y +LDN KQVVALI+DDMCINCGKCYMAC DSGYQAI F +TH VT++CTGC
Sbjct: 923 NRISSYKKLDNTKQVVALIDDDMCINCGKCYMACADSGYQAIEFDEQTHIPRVTEDCTGC 982
Query: 560 TLCLSI 565
TLCLS+
Sbjct: 983 TLCLSV 988
>gi|281349697|gb|EFB25281.1| hypothetical protein PANDA_003122 [Ailuropoda melanoleuca]
Length = 1009
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/392 (63%), Positives = 308/392 (78%), Gaps = 2/392 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQ+RLP+DAVNFE+EL+KDLGVKI C +SLS ++T+ L+++GY A FIGIG P+
Sbjct: 216 SEIPQFRLPYDAVNFEIELMKDLGVKIICGKSLSANEMTLSTLKEEGYKAAFIGIGLPDP 275
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
N IF+ LT+ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAFD
Sbjct: 276 NKNHIFKDLTQNHGFYTSKDFLPLVAKSSKAGMCA-CHP-PLPSIRGVVIVLGAGDTAFD 333
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSAL CGA +V +VFRKG NIRAVPEEV+LA E+KCEFLPF+SP +V +K+ +I +
Sbjct: 334 CATSALCCGARRVFIVFRKGFVNIRAVPEEVELAKEKKCEFLPFLSPRKVILKEGRIVAV 393
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
QF RTEQ+E G+W E E++ ++LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 394 QFVRTEQDETGKWHEHEDEIVRLKADVVISAFGSVLSDPTVKEALSPLKFNRWNLPEVDP 453
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F +
Sbjct: 454 ETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFYT 513
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNV
Sbjct: 514 PIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNV 573
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 574 SPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 605
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/263 (65%), Positives = 209/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+Y+K+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 622 NIVIASIMCSYSKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 681
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 682 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 741
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 742 GFGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 801
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 802 VCSAVQNQDFTVIQDYCTGLRALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMGK 861
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 862 KLPSFGPYLEQRKEIIAENKIRQ 884
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 89/130 (68%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVI 495
+ + +P+FG Y + R+ +I E +++ + LP +R+ P + I ++KDVI
Sbjct: 858 LMGKKLPSFGPYLEQRKEIIAENKIRQKEQNA-----ALPPLERKHFIPKKPIPTIKDVI 912
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F P+TH +TD
Sbjct: 913 GKALQYLGTFGELSNLEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPDTHLPTITDS 972
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 973 CTGCTLCLSV 982
>gi|301758641|ref|XP_002915175.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Ailuropoda
melanoleuca]
Length = 1026
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/392 (63%), Positives = 308/392 (78%), Gaps = 2/392 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQ+RLP+DAVNFE+EL+KDLGVKI C +SLS ++T+ L+++GY A FIGIG P+
Sbjct: 229 SEIPQFRLPYDAVNFEIELMKDLGVKIICGKSLSANEMTLSTLKEEGYKAAFIGIGLPDP 288
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
N IF+ LT+ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAFD
Sbjct: 289 NKNHIFKDLTQNHGFYTSKDFLPLVAKSSKAGMCA-CHP-PLPSIRGVVIVLGAGDTAFD 346
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSAL CGA +V +VFRKG NIRAVPEEV+LA E+KCEFLPF+SP +V +K+ +I +
Sbjct: 347 CATSALCCGARRVFIVFRKGFVNIRAVPEEVELAKEKKCEFLPFLSPRKVILKEGRIVAV 406
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
QF RTEQ+E G+W E E++ ++LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 407 QFVRTEQDETGKWHEHEDEIVRLKADVVISAFGSVLSDPTVKEALSPLKFNRWNLPEVDP 466
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F +
Sbjct: 467 ETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFYT 526
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNV
Sbjct: 527 PIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNV 586
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 587 SPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 618
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 172/263 (65%), Positives = 209/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+Y+K+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYSKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GFGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 815 VCSAVQNQDFTVIQDYCTGLRALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMGK 874
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 875 KLPSFGPYLEQRKEIIAENKIRQ 897
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 89/130 (68%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVI 495
+ + +P+FG Y + R+ +I E +++ + LP +R+ P + I ++KDVI
Sbjct: 871 LMGKKLPSFGPYLEQRKEIIAENKIRQKEQNA-----ALPPLERKHFIPKKPIPTIKDVI 925
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F P+TH +TD
Sbjct: 926 GKALQYLGTFGELSNLEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPDTHLPTITDS 985
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 986 CTGCTLCLSV 995
>gi|355684848|gb|AER97536.1| dihydropyrimidine dehydrogenase [Mustela putorius furo]
Length = 812
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/392 (64%), Positives = 305/392 (77%), Gaps = 2/392 (0%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SEIPQ+RL +DAVNFE+EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P+
Sbjct: 16 SEIPQFRLSYDAVNFEIELMKDLGVKIICGKSLSANDITLSTLKEEGYKAAFIGIGLPDP 75
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
N IF+ LT+ GFYTSK FLP VA SSK G+C C LP ++G VIVLGAGDTAFD
Sbjct: 76 NKNHIFKDLTQNHGFYTSKDFLPLVAKSSKAGMCA-CHS-PLPSIRGVVIVLGAGDTAFD 133
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
CATSAL CGA +V +VFRKG NIRAVPEEV+LA E++CEFLPF+SP +V +K+ +I M
Sbjct: 134 CATSALCCGARRVSIVFRKGFVNIRAVPEEVELAKEKRCEFLPFLSPRKVILKEGRIVAM 193
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
QF RTEQ+E G W E E++ + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 194 QFVRTEQDEAGNWHEHEDEIVTLKADVVISAFGSVLSDPTVKEALSPLKFNRWNLPEVDP 253
Query: 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS 341
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP LP F +
Sbjct: 254 ETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFYT 313
Query: 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNV 401
IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNV
Sbjct: 314 PIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNV 373
Query: 402 SPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
SPRI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 374 SPRIIRGTTSGPLYGPGQSSFLNIELISEKTA 405
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/263 (65%), Positives = 209/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+Y+K+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 422 NIVIASIMCSYSKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 481
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 482 CRWVRQAVQIPFFAKLTPNVTDIASIARAAKEGGADGVTATNTVSGLMGLRADGTPWPAV 541
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 542 GFGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 601
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 602 VCSAVQNQDFTVIQDYCTGLRALLYLKSIEELEDWDGQSPATVSHQKGKPVPRIAELMGK 661
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 662 KLPSFGPYLEQRKEIIAENKIRQ 684
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 87/125 (69%), Gaps = 7/125 (5%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVIGQAVQ 500
+P+FG Y + R+ +I E +++ + LP +R+ P + I ++KDVIG+A+Q
Sbjct: 663 LPSFGPYLEQRKEIIAENKIRQKEQNA-----ALPPFERKHFIPKKPIPTIKDVIGKALQ 717
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F P+TH +TD CTGCT
Sbjct: 718 YLGAFGELSNLEQVVAMIDEEMCINCGKCYMTCNDSGYQAIRFDPDTHLPTITDSCTGCT 777
Query: 561 LCLSI 565
LCLS+
Sbjct: 778 LCLSV 782
>gi|195058500|ref|XP_001995454.1| GH17755 [Drosophila grimshawi]
gi|193896240|gb|EDV95106.1| GH17755 [Drosophila grimshawi]
Length = 1033
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/393 (63%), Positives = 299/393 (76%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP D VNFE++LVKDLGVK E R+LS++D+TI L G+ AIF+GIG P
Sbjct: 226 SAEIPQYRLPIDVVNFEIDLVKDLGVKFELNRALSSKDLTINGLLSSGHDAIFVGIGLPE 285
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F GL + GFYTSK FLP V+ SK GLC +SLP L G VIVLGAGDTAF
Sbjct: 286 PKLEPMFNGLNTQSGFYTSKNFLPMVSDGSKPGLCACKSAQSLPKLYGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA EE+CE +P++SP +V VKD IA
Sbjct: 346 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELAREERCELMPYLSPRKVIVKDGHIAA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQN++ EWVEDEEQ ++LKAN++ISAFGS L D +V A+ P+ + G P V+
Sbjct: 406 MEFCRTEQNDQDEWVEDEEQLVRLKANFVISAFGSGLQDAEVKVALTPLTF-RNGLPVVD 464
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TTM +SVP VF GGD +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 465 RTTMQSSVPQVFLGGDLGGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFH 521
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CGLKF NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KDMVTN
Sbjct: 522 TDIDNVDISVEMCGLKFENPFGLASAPPTTSAAMIRRAFEQGWGFVVTKTFGLDKDMVTN 581
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+Q FLNIELISEK A
Sbjct: 582 VSPRIVRGTTSGYRYGPQQNCFLNIELISEKLA 614
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 204/261 (78%), Gaps = 4/261 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC+YN+ DW EL+ K E +GADALELNLSCPHGMGE GMGLACGQ+P++V +IS
Sbjct: 632 IIIASIMCSYNEADWTELATKAEASGADALELNLSCPHGMGESGMGLACGQEPKLVMDIS 691
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA+AA G ADG SAINTV GLMSL AD WPA+G
Sbjct: 692 RWVRKAVKVPFFIKLTPNITDIVSIARAAQLGGADGGSAINTVQGLMSLKADATAWPAIG 751
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM L+AVS IAK P F ILGIGGIDS +VALQF+QAGA +QI
Sbjct: 752 KEQRTTYGGVSGNATRPMALRAVSEIAKKLPGFAILGIGGIDSGEVALQFLQAGATVLQI 811
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFT++DDY T L+TLLYLK+ + G WDGQSPPTPVHQKGKP
Sbjct: 812 CSSVQNQDFTLIDDYCTSLKTLLYLKANPPPVNGTFWDGQSPPTPVHQKGKPVIHLTGTG 871
Query: 801 GKAIPNFGEYKKIRENLITEL 821
+ + FG Y+K R+ + +L
Sbjct: 872 NQTLGYFGPYQKQRDIKLADL 892
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q + FG Y+K R+ I +L++L + + ++ V DVIG A+
Sbjct: 873 QTLGYFGPYQKQRD--IKLADLRRLEGAFWDARQASAASSSDASIKLAPKVSDVIGAALP 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y LDN +Q VALINDDMCINCGKCYM C DSGYQAI F TH HV D+CTGCT
Sbjct: 931 MIGAYKSLDNTQQKVALINDDMCINCGKCYMTCADSGYQAIEFDKNTHLPHVNDDCTGCT 990
Query: 561 LCLSI 565
LC+S+
Sbjct: 991 LCVSV 995
>gi|410967804|ref|XP_003990405.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Felis catus]
Length = 1023
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/393 (63%), Positives = 306/393 (77%), Gaps = 2/393 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+DAV+FE+EL+KDLGVKI C +SLS D+T+ L+++GY A FIGIG P+
Sbjct: 225 TSEIPQFRLPYDAVHFEIELMKDLGVKIICGKSLSVDDMTLSTLKEEGYKAAFIGIGLPD 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
N IF+ LT++ GFYTSK FLP VA SSK G+C LP ++G VIVLGAGDTAF
Sbjct: 285 PNKNHIFKDLTQDHGFYTSKDFLPLVAKSSKAGMCAC--HSPLPSIRGVVIVLGAGDTAF 342
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSAL CGA +V +VFRKG NIRAVPEEV+LA E++CEFLPF+SP +V VK +I
Sbjct: 343 DCATSALCCGARRVFIVFRKGFVNIRAVPEEVELAKEKRCEFLPFLSPRKVIVKGGRIVA 402
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G W E E++ + L+A+ +ISAFGS L D V EA+ P+K +++ PEV+
Sbjct: 403 MQFVRTEQDEMGNWNEHEDELVHLRADVVISAFGSVLSDPTVKEALSPLKFNRWNLPEVD 462
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHKYIQ + +V KP +P F
Sbjct: 463 PETMQTSEPWVFAGGDIVGVANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPEVPLFY 522
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 523 TPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTN 582
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 583 VSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 615
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/263 (65%), Positives = 209/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+Y+K+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 632 NIVIASIMCSYSKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 691
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 692 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 751
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 752 GIGKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 811
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV+ DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + GK
Sbjct: 812 VCSAIQNQDFTVIQDYCTGLKALLYLKSIEELQDWDGQSPATMSHQKGKPVPRIAELMGK 871
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 872 KLPSFGPYLERRKEIIAENKIRQ 894
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 88/130 (67%), Gaps = 7/130 (5%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVI 495
+ + +P+FG Y + R+ +I E +++ + P +R+ P + I ++KDVI
Sbjct: 868 LMGKKLPSFGPYLERRKEIIAENKIRQKEQNA-----AFPPLERKPFIPRKPIPTIKDVI 922
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+Q + + EL + +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD
Sbjct: 923 GKALQYLGTFGELSHLEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDS 982
Query: 556 CTGCTLCLSI 565
CTGCTLCLS+
Sbjct: 983 CTGCTLCLSV 992
>gi|195446906|ref|XP_002070975.1| GK25544 [Drosophila willistoni]
gi|194167060|gb|EDW81961.1| GK25544 [Drosophila willistoni]
Length = 1033
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 299/393 (76%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP D VNFE++LVKDLGV+IE RSLST+D+TI+ L G+ A+F+GIG P
Sbjct: 223 AAEIPQYRLPIDVVNFEIDLVKDLGVQIETNRSLSTKDLTIKGLLSSGHDAVFVGIGLPE 282
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP VA SK GLC ++LP L G VIVLGAGDTAF
Sbjct: 283 PKINPIFAGLDVSKGFYTSKNFLPLVADGSKPGLCACKASQALPKLHGNVIVLGAGDTAF 342
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV LA EE+CE LP++SP +V VK+ I
Sbjct: 343 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVDLAREERCELLPYLSPRKVIVKEGLITA 402
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE+ EWVEDEEQ ++LKAN++ISAFGS L D DV EA+ P+ + PEVN
Sbjct: 403 MEFCRTEQNEQDEWVEDEEQVVRLKANFVISAFGSGLQDADVREALTPLSF-RGELPEVN 461
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TT+ +SV VF GGD A +++TTVESVNDGK AAW IH + + L + LP F
Sbjct: 462 KTTLQSSVANVFLGGDLAGVANTTVESVNDGKVAAWSIHCQL---SGLPLDTPAALPLFH 518
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VD+SVE+CGLKF NPFGLASAPPTT+ +M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 519 TDIDNVDLSVEMCGLKFENPFGLASAPPTTSGAMIRRAFEQGWGFVVTKTFGLDKDLVTN 578
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 579 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 611
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 203/265 (76%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC+YN+ DW EL++ EK+GADALELNLSCPHGMGERGMGLACGQDP++V IS
Sbjct: 629 IIIASIMCSYNEADWKELAQLAEKSGADALELNLSCPHGMGERGMGLACGQDPKLVEQIS 688
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR + +PFF+KLTPNITNI IA+AA G A G SAINTV GLMSL AD WPA+G
Sbjct: 689 RWVREVITVPFFIKLTPNITNIWTIAEAAQRGGASGGSAINTVQGLMSLKADATAWPAIG 748
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRPM L A+S IAK P FPILGIGGIDS +VALQFIQAGA +QI
Sbjct: 749 QEKRTTYGGVSGNATRPMALHAISDIAKRLPGFPILGIGGIDSGEVALQFIQAGATVLQI 808
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFT++DDY T L+ LLYLK+ + G WDGQSPPT VHQKGKP +
Sbjct: 809 CSSVQNQDFTLIDDYCTSLRALLYLKANPPPVNGAFWDGQSPPTTVHQKGKPVVHLTGEG 868
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ + FG Y++ R+ + + LK+
Sbjct: 869 NRTLGFFGPYQRQRDIKLADFRLKQ 893
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Query: 446 FGEYKKIRENLITELNLKKLN----SDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQR 501
FG Y++ R+ + + LK+ + P + + P L + DVIG A+ R
Sbjct: 875 FGPYQRQRDIKLADFRLKQGAFWDAQQSATTSKSTPATEGSKPA---LKITDVIGVALPR 931
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+ Y +LDNK+Q VALINDDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTL
Sbjct: 932 IGPYNKLDNKQQKVALINDDMCINCGKCYMTCADSGYQAIEFDKDTHLPHVNDDCTGCTL 991
Query: 562 CLSI 565
C+S+
Sbjct: 992 CVSV 995
>gi|268579437|ref|XP_002644701.1| C. briggsae CBR-DPYD-1 protein [Caenorhabditis briggsae]
Length = 1032
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/392 (61%), Positives = 311/392 (79%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V+FE++L +D+GVKIE RSL DIT++KL+ G A+FIGIG P
Sbjct: 241 SAEIPQFRLPYDVVDFEIQLARDVGVKIETNRSLCKEDITLDKLKSQGAAAVFIGIGNPE 300
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F+GLT E GFYTSK +LP VA +SK G+CG CK+ LP ++G V+VLGAGDTA
Sbjct: 301 PKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCG-CKRTPLPTMRGRVVVLGAGDTAM 359
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P +++VKD +I
Sbjct: 360 DCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKINVKDGRIVS 419
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P KL+K+G EV+
Sbjct: 420 IEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDTVLSALQPCKLNKWGGIEVD 479
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TT TS VF GGD A +++TTVESVNDGK AAW++H+YIQ K+ + + P LPKF
Sbjct: 480 STTQQTSEAWVFAGGDVAGVAETTVESVNDGKIAAWNMHRYIQAKHGNVLGETPELPKFF 539
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT+ L KD+VTN
Sbjct: 540 TPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTN 599
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRIV+G+TS LYGP QGSF+NIELISEK+
Sbjct: 600 VSPRIVRGSTSGPLYGPNQGSFMNIELISEKS 631
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 199/264 (75%), Gaps = 8/264 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIMC YNK+DW+EL+ K+E AGAD LELNLSCPHGMGE+GMGLACGQ PE+V+ I
Sbjct: 650 IVVASIMCVYNKEDWIELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEIC 709
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G
Sbjct: 710 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIG 769
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 770 NTKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQV 829
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVV+DY TGL+ LLYL + LK WDGQSPP HQKGKP + K
Sbjct: 830 CSAVQNQDFTVVEDYCTGLKALLYLSGAESLKEWDGQSPPVEKHQKGKPILL---QGQKN 886
Query: 804 IPNFGEYKKIRENL----ITELNL 823
+P FG+++ RE L ++E NL
Sbjct: 887 MPFFGKFRDEREKLEALKLSESNL 910
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 509 DNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DECTGCTLCLSI 565
D + V + DDMCINCGKCYM CNDSGYQAITF THQ HVT D+CTGCTLC S+
Sbjct: 923 DTQVARVPTVEDDMCINCGKCYMTCNDSGYQAITFDAVTHQPHVTEDDCTGCTLCYSV 980
>gi|195565891|ref|XP_002106529.1| GD16077 [Drosophila simulans]
gi|194203907|gb|EDX17483.1| GD16077 [Drosophila simulans]
Length = 1031
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 296/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL+T+D+TI+ L G+ A+F+GIG P
Sbjct: 225 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLATKDLTIQGLLSSGHDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD I
Sbjct: 345 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 405 MEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 521 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 173/265 (65%), Positives = 205/265 (77%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N+DDW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 IVIASIMCSFNEDDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIHAGATVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + +
Sbjct: 811 CSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTGEG 870
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + EL +K
Sbjct: 871 KATLGFFGPYQRQRDIKMAELRSQK 895
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Query: 446 FGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
FG Y++ R+ + EL +K G P +N +KDVIG A+ ++ +Y
Sbjct: 877 FGPYQRQRDIKMAELRSQKGALWDAEQVKGTPP-AVNGAPNPAPRIKDVIGAALDKIGSY 935
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
+LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+S+
Sbjct: 936 NKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSV 995
>gi|195355035|ref|XP_002043999.1| GM13670 [Drosophila sechellia]
gi|194129244|gb|EDW51287.1| GM13670 [Drosophila sechellia]
Length = 922
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/393 (62%), Positives = 296/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL+T+D+TI+ L G+ A+F+GIG P
Sbjct: 225 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLATKDLTIQGLLSSGHDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD I
Sbjct: 345 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D D+ A+ P++ + P V+
Sbjct: 405 MEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDIKAALAPLQF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 521 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 153/207 (73%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N+DDW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 IVIASIMCSFNEDDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P F ILGIGGIDS +VALQFI A +
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFLILGIGGIDSGEVALQFIHAAPLFCRS 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS 771
+ + L+ LLYLK+
Sbjct: 811 APPYRTRTSPSSRTTARALKALLYLKA 837
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 521 DMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
DMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+S+
Sbjct: 842 DMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSV 886
>gi|66354366|gb|AAY44826.1| suppressor-of-rudimentary dihydropyrimidine dehydrogenase mutant
[Drosophila melanogaster]
Length = 1031
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 295/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL T+D+TI+ L G+ A+F+GIG P
Sbjct: 225 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD I
Sbjct: 345 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 405 MEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 521 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 205/265 (77%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N++DW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 IVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIHAGATVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + +
Sbjct: 811 CSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTGEG 870
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + EL +K
Sbjct: 871 KATLGFFGPYQRQRDIKMAELRSQK 895
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 446 FGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
FG Y++ R+ + EL +K P P +KDVIG A+ ++ +Y
Sbjct: 877 FGPYQRQRDIKMAELRSQKGALWDAEQVKATPPASNGAP-NPAPRIKDVIGAALDKIGSY 935
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
+LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+S+
Sbjct: 936 NKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSV 995
>gi|16182390|gb|AAL13488.1| GH01650p [Drosophila melanogaster]
Length = 864
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 295/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL T+D+TI+ L G+ A+F+GIG P
Sbjct: 58 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPE 117
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 118 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 177
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD I
Sbjct: 178 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITA 237
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 238 MEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVD 296
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 297 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 353
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 354 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 413
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 414 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 446
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 205/265 (77%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N++DW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 464 IVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 523
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 524 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 583
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 584 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIHAGATVLQI 643
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + +
Sbjct: 644 CSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTGEG 703
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + EL +K
Sbjct: 704 KATLGFFGPYQRQRDIKMAELRSQK 728
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 446 FGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
FG Y++ R+ + EL +K P P +KDVIG A+ ++ +Y
Sbjct: 710 FGPYQRQRDIKMAELRSQKGALWDAEQVKATPPASNGAP-NPAPRIKDVIGAALDKIGSY 768
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
+LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+S+
Sbjct: 769 NKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSV 828
>gi|18858217|ref|NP_572538.1| suppressor of rudimentary, isoform B [Drosophila melanogaster]
gi|24640763|ref|NP_727320.1| suppressor of rudimentary, isoform C [Drosophila melanogaster]
gi|10728539|gb|AAF46461.2| suppressor of rudimentary, isoform B [Drosophila melanogaster]
gi|22831986|gb|AAN09247.1| suppressor of rudimentary, isoform C [Drosophila melanogaster]
gi|24850449|gb|AAN64918.1| dihydropyrimidine dehydrogenase [Drosophila melanogaster]
gi|189181839|gb|ACD81696.1| GH13260p [Drosophila melanogaster]
Length = 1031
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 295/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL T+D+TI+ L G+ A+F+GIG P
Sbjct: 225 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD I
Sbjct: 345 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 405 MEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 521 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 205/265 (77%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N++DW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 IVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIHAGATVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + +
Sbjct: 811 CSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTGEG 870
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + EL +K
Sbjct: 871 KATLGFFGPYQRQRDIKMAELRSQK 895
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 446 FGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
FG Y++ R+ + EL +K P P +KDVIG A+ ++ +Y
Sbjct: 877 FGPYQRQRDIKMAELRSQKGALWDAEQVKATPPASNGAP-NPAPRIKDVIGAALDKIGSY 935
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
+LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+S+
Sbjct: 936 NKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSV 995
>gi|221272036|sp|A8XKG6.2|DPYD_CAEBR RecName: Full=Probable dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
Length = 1053
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/402 (60%), Positives = 312/402 (77%), Gaps = 11/402 (2%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V+FE++L +D+GVKIE RSL DIT++KL+ G A+FIGIG P
Sbjct: 241 SAEIPQFRLPYDVVDFEIQLARDVGVKIETNRSLCKEDITLDKLKSQGAAAVFIGIGNPE 300
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F+GLT E GFYTSK +LP VA +SK G+CG CK+ LP ++G V+VLGAGDTA
Sbjct: 301 PKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCG-CKRTPLPTMRGRVVVLGAGDTAM 359
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P +++VKD +I
Sbjct: 360 DCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKINVKDGRIVS 419
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P KL+K+G EV+
Sbjct: 420 IEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDTVLSALQPCKLNKWGGIEVD 479
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKT----------AAWHIHKYIQEKNNLTV 330
TT TS VF GGD A +++TTVESVNDGKT AAW++H+YIQ K+ +
Sbjct: 480 STTQQTSEAWVFAGGDVAGVAETTVESVNDGKTLMDLTFKIQIAAWNMHRYIQAKHGNVL 539
Query: 331 PDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKT 390
+ P LPKF + ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT
Sbjct: 540 GETPELPKFFTPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKT 599
Query: 391 FSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
+ L KD+VTNVSPRIV+G+TS LYGP QGSF+NIELISEK+
Sbjct: 600 YGLDKDLVTNVSPRIVRGSTSGPLYGPNQGSFMNIELISEKS 641
Score = 332 bits (850), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 162/270 (60%), Positives = 203/270 (75%), Gaps = 10/270 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIMC YNK+DW+EL+ K+E AGAD LELNLSCPHGMGE+GMGLACGQ PE+V+ I
Sbjct: 660 IVVASIMCVYNKEDWIELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEIC 719
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G
Sbjct: 720 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIG 779
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 780 NTKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQV 839
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVV+DY TGL+ LLYL + LK WDGQSPP HQKGKP + K
Sbjct: 840 CSAVQNQDFTVVEDYCTGLKALLYLSGAESLKEWDGQSPPVEKHQKGKPILL---QGQKN 896
Query: 804 IPNFGEYKKIRENL----ITELNLKKLNSD 829
+P FG+++ RE L ++E NL L++D
Sbjct: 897 MPFFGKFRDEREKLEALKLSESNL--LDTD 924
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 28/128 (21%)
Query: 443 IPNFGEYKKIRENL----ITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+P FG+++ RE L ++E NL L++D + + +T V + +V+DVI
Sbjct: 897 MPFFGKFRDEREKLEALKLSESNL--LDTDNYHFAS-----RPDTQVARVPTVEDVI--- 946
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DECT 557
+ VA+I+ DMCINCGKCYM CNDSGYQAITF THQ HVT D+CT
Sbjct: 947 -------------EHEVAIIDHDMCINCGKCYMTCNDSGYQAITFDAVTHQPHVTEDDCT 993
Query: 558 GCTLCLSI 565
GCTLC S+
Sbjct: 994 GCTLCYSV 1001
>gi|194890619|ref|XP_001977354.1| GG18994 [Drosophila erecta]
gi|190649003|gb|EDV46281.1| GG18994 [Drosophila erecta]
Length = 1033
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 295/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL+T+D+TIE L G+ A+F+GIG P
Sbjct: 225 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLATKDLTIEGLLSTGHDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LPF+SP +V VKD I
Sbjct: 345 DCATSALRCGARRVFVVFRKGTSGIRAVPEEVELARDERCELLPFLSPRKVIVKDGLITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+ RTEQNE EWVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 405 MELCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVRAALAPLQF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L K++VTN
Sbjct: 521 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKNLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/265 (63%), Positives = 203/265 (76%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC +N+DDW EL+ K E++GADALELNLSCPHGMGERGMG+ACGQDP++V IS
Sbjct: 631 IVIASIMCGFNEDDWTELATKAEQSGADALELNLSCPHGMGERGMGMACGQDPQLVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+P F+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPIFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRLPGFPILGIGGIDSGEVALQFIHAGASVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + +
Sbjct: 811 CSSVQNQDFTVIEDYCTSLKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTGEG 870
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + EL ++
Sbjct: 871 RATLGFFGPYQRQRDIKMAELRSQQ 895
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 62/75 (82%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+KDVIG A+ ++ +Y +LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH
Sbjct: 923 IKDVIGAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIP 982
Query: 551 HVTDECTGCTLCLSI 565
HV D+CTGCTLC+S+
Sbjct: 983 HVNDDCTGCTLCVSV 997
>gi|195479863|ref|XP_002101056.1| GE17405 [Drosophila yakuba]
gi|194188580|gb|EDX02164.1| GE17405 [Drosophila yakuba]
Length = 1031
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/393 (62%), Positives = 296/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++EIPQYRLP DAVNFE++LV+DLGV+IE RSL T+D+T++ L G+ A+F+GIG P
Sbjct: 225 AAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSLGTKDLTVQGLLSAGHDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF GL GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD I
Sbjct: 345 DCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ+E +WVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 405 MEFCRTEQDENDKWVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SVP VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RITMQSSVPQVFIGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLNTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 521 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 205/265 (77%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N+ DW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 IVIASIMCSFNEADWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPFFIKLTPNITDIVSIAAAAQRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFIQAGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIQAGATVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + +
Sbjct: 811 CSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTGEG 870
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + EL ++
Sbjct: 871 KATLGFFGRYQQQRDIKMAELRSQQ 895
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Query: 446 FGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
FG Y++ R+ + EL ++ G P P +KDVIG A+ ++ +Y
Sbjct: 877 FGRYQQQRDIKMAELRSQQGPLWDAEQVKGTPPAANGAP-RPAPRIKDVIGAALDKIGSY 935
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
+LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV ++CTGCTLC+S+
Sbjct: 936 NKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNNDCTGCTLCVSV 995
>gi|341874167|gb|EGT30102.1| CBN-DPYD-1 protein [Caenorhabditis brenneri]
Length = 1060
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/401 (59%), Positives = 312/401 (77%), Gaps = 1/401 (0%)
Query: 32 ERPVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTA 91
+RP S+EIPQ+RLP+D V+FE++L +D+GVKIE R LS D+T+ KL++ G A
Sbjct: 233 KRPYIGGLSSAEIPQFRLPYDVVDFEIQLARDIGVKIETNRPLSKDDLTLTKLKEQGAAA 292
Query: 92 IFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVI 151
+F+GIG P + P+F+GLT E GFYTSK +LP VA +SK G+CG CK+ LP ++G V+
Sbjct: 293 VFVGIGNPEPKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCG-CKRTPLPTMRGRVV 351
Query: 152 VLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV 211
VLGAGDTA DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P ++
Sbjct: 352 VLGAGDTAMDCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKI 411
Query: 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271
+VKD +I ++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P +L
Sbjct: 412 NVKDGRIVSIEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQPCQL 471
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVP 331
+K+G EV+ T TS VF GGD A +++TTVESVNDGK AAW++H+YIQ + V
Sbjct: 472 NKWGGIEVDPVTQQTSEKWVFAGGDVAGVAETTVESVNDGKIAAWNMHRYIQALHGNQVS 531
Query: 332 DKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTF 391
+ P LPKF + ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT+
Sbjct: 532 ETPELPKFFTPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTY 591
Query: 392 SLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
L KD+VTNVSPRIV+G+TS L+GP QGSF+NIELISEK+
Sbjct: 592 GLDKDLVTNVSPRIVRGSTSGPLFGPNQGSFMNIELISEKS 632
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 199/264 (75%), Gaps = 8/264 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIMCTYNK DW+EL+ K+E AGAD LELNLSCPHGMGE+GMGLACGQ P++V+ I
Sbjct: 651 IVVASIMCTYNKADWVELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPDIVKEIC 710
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + DGN WPA+G
Sbjct: 711 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKVDGNAWPAIG 770
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 771 TGKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLLAGASVLQV 830
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVV+DY TGL+ LLYL + LK WDGQSPP HQKGKP + K
Sbjct: 831 CSAVQNQDFTVVEDYCTGLKALLYLSGAESLKDWDGQSPPVDKHQKGKPILI---QGQKK 887
Query: 804 IPNFGEYKKIRENL----ITELNL 823
+P FG+++ RE L ++E NL
Sbjct: 888 LPFFGKFRDEREKLEAIKLSETNL 911
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 12/130 (9%)
Query: 441 QAIPNFGEYKKIRENL----ITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIG 496
+ +P FG+++ RE L ++E NL + +N + +T V + +V+DVIG
Sbjct: 886 KKLPFFGKFRDEREKLEAIKLSETNL-------LDTENYHFASRPDTQVSRVPTVEDVIG 938
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DE 555
+A+ R+ Y LDN++Q VA+I+DDMCINCGKCYM CNDSGYQAITF THQ HVT D+
Sbjct: 939 KALPRIGPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDAVTHQPHVTEDD 998
Query: 556 CTGCTLCLSI 565
CTGCTLC S+
Sbjct: 999 CTGCTLCYSV 1008
>gi|308511285|ref|XP_003117825.1| CRE-DPYD-1 protein [Caenorhabditis remanei]
gi|308238471|gb|EFO82423.1| CRE-DPYD-1 protein [Caenorhabditis remanei]
Length = 1074
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/392 (60%), Positives = 310/392 (79%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V+FE++L +D+GVKIE RSL DIT++KL++ G A+FIGIG P
Sbjct: 256 SAEIPQFRLPYDVVDFEIQLARDIGVKIETNRSLCKEDITLDKLKEQGAVAVFIGIGNPE 315
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F+GLT E GFYTSK +LP VA +SK G+CG CK+ LP ++G V+VLGAGDTA
Sbjct: 316 PKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCG-CKRTPLPTMRGRVVVLGAGDTAM 374
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P +++VKD +I
Sbjct: 375 DCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKINVKDGRIVS 434
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P +L+K+G EV+
Sbjct: 435 IEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQPCQLNKWGGIEVD 494
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
T TS VF GGD A +++TTVESVNDGK AAW++H++IQ + V + P LPKF
Sbjct: 495 PVTQQTSEKWVFAGGDVAGIAETTVESVNDGKIAAWNMHRHIQALHGNVVSEFPELPKFF 554
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT+ L KD+VTN
Sbjct: 555 TPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTN 614
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRIV+G+TS +YGP QGSF+NIELISEK+
Sbjct: 615 VSPRIVRGSTSGPVYGPNQGSFMNIELISEKS 646
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/264 (60%), Positives = 201/264 (76%), Gaps = 8/264 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIMCTYNK DW+EL+ ++E+AGAD LELNLSCPHGMGE+GMGLACGQ PE+V+ I
Sbjct: 665 IVVASIMCTYNKADWVELATQSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEIC 724
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G
Sbjct: 725 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIG 784
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 785 GAKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQV 844
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVV+DY TGL+ LLYL + LK WDGQSPP P HQKGKP + K
Sbjct: 845 CSAVQNQDFTVVEDYCTGLKALLYLSGAESLKDWDGQSPPIPKHQKGKPILV---QGQKN 901
Query: 804 IPNFGEYKKIRENL----ITELNL 823
+P FG+++ RE L ++E NL
Sbjct: 902 LPFFGKFRDEREKLESIKLSETNL 925
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 87/128 (67%), Gaps = 12/128 (9%)
Query: 443 IPNFGEYKKIRENL----ITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+P FG+++ RE L ++E NL + +N + +T V I +V+DVIG+A
Sbjct: 902 LPFFGKFRDEREKLESIKLSETNL-------LDTENYHFASRPDTQVSNIPTVEDVIGKA 954
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DECT 557
+ R+ Y LDN++Q VA+I+DDMCINCGKCYM CNDSGYQAITF THQ HVT D+CT
Sbjct: 955 LPRIGPYVTLDNQQQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDAVTHQPHVTEDDCT 1014
Query: 558 GCTLCLSI 565
GCTLC S+
Sbjct: 1015 GCTLCYSV 1022
>gi|194769374|ref|XP_001966779.1| GF19101 [Drosophila ananassae]
gi|190618300|gb|EDV33824.1| GF19101 [Drosophila ananassae]
Length = 1034
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/393 (61%), Positives = 297/393 (75%), Gaps = 4/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQYRLP AV+FE+ LVKDLGV+IE RSLST+D+TI+ L GY A+F+GIG P
Sbjct: 225 ASEIPQYRLPIAAVDFEISLVKDLGVRIETGRSLSTKDLTIQGLLSSGYDAVFVGIGLPE 284
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ PIF+GL+ GFYTSK FLP V+ SK GLC LP L G VIVLGAGDTAF
Sbjct: 285 PKLNPIFKGLSASNGFYTSKNFLPLVSEGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V V FRKG + IRAVPEEV+LA +E+CE LP++SP +V VKD +I
Sbjct: 345 DCATSALRCGARRVFVAFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGQITA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQ+++ WVEDEEQ ++LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 405 MEFCRTEQDDQDAWVEDEEQVVRLKANFVISAFGSGLEDADVKAALSPLEF-RGELPVVD 463
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +S+ VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 464 RVTMQSSLKQVFLGGDLAGVANTTVESVNDGKVAAWGIHCQLQ---GLPLSTPAALPLFY 520
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISV++CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 521 TDIDEVDISVDLCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 580
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 581 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 613
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/265 (63%), Positives = 204/265 (76%), Gaps = 4/265 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC++N+ DW EL+K+ ++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 VIIASIMCSFNEADWTELAKRAAESGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V +PFF+KLTPNIT+I IA+AA G ADG SAINTV GLMSL AD WPA+G
Sbjct: 691 RWVRRAVTLPFFIKLTPNITDIVAIAEAAKRGGADGGSAINTVQGLMSLKADATAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA+ P FPILGIGGIDS +VALQFIQAGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIARRVPGFPILGIGGIDSGEVALQFIQAGATVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKS----TQLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + WDGQSPPTPVHQKGKP
Sbjct: 811 CSSVQNQDFTVIEDYCTSLRALLYLKANPPPSNGAFWDGQSPPTPVHQKGKPVVHLTGSG 870
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+ FG Y++ R+ + E+ +K
Sbjct: 871 NATLGFFGPYQRQRDLQLEEVRRQK 895
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Query: 446 FGEYKKIRENLITELNLKK---LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
FG Y++ R+ + E+ +K +++ ++Q P + + ++ +KDV+G A++R+
Sbjct: 877 FGPYQRQRDLQLEEVRRQKGALWDAETGAVQE-TPVLENGSAPKSAPRIKDVVGAALERI 935
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y +LDNK+Q VALINDDMCINCGKCYM C DSGYQAI F ETH HV D+CTGCTLC
Sbjct: 936 GPYNKLDNKQQKVALINDDMCINCGKCYMTCADSGYQAIEFDKETHIPHVNDDCTGCTLC 995
Query: 563 LSI 565
+S+
Sbjct: 996 VSV 998
>gi|71984108|ref|NP_508927.2| Protein DPYD-1 [Caenorhabditis elegans]
gi|97536128|sp|Q18164.2|DPYD_CAEEL RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|351058264|emb|CCD65682.1| Protein DPYD-1 [Caenorhabditis elegans]
Length = 1059
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/392 (60%), Positives = 308/392 (78%), Gaps = 1/392 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V+FE++L +D+GV+IE R L +T+ KL++ G A+FIGIG P
Sbjct: 241 SAEIPQFRLPYDVVDFEIQLARDIGVQIETNRPLGKDGLTLAKLKEQGAAAVFIGIGNPE 300
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F+GLT E GFYTSK +LP VA +SK G+CG CK+ LP ++G V+VLGAGDTA
Sbjct: 301 PKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCG-CKRTPLPTMRGRVVVLGAGDTAM 359
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P +++VKD +I
Sbjct: 360 DCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKINVKDGRIVS 419
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P +L+K+G EV+
Sbjct: 420 IEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQPCQLNKWGGIEVD 479
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TT TS VF GGD A +++TTVESVNDGK AAW++H+YIQ + V + P LP+F
Sbjct: 480 STTQQTSEKWVFAGGDVAGVAETTVESVNDGKIAAWNMHRYIQSLHGNQVSETPELPQFF 539
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT+ L KD+VTN
Sbjct: 540 TPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTN 599
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRIV+G+TS LYGP QGSF+NIELISEK+
Sbjct: 600 VSPRIVRGSTSGPLYGPNQGSFMNIELISEKS 631
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/264 (61%), Positives = 200/264 (75%), Gaps = 8/264 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC YNK DW+EL+ K+E+AGAD LELNLSCPHGMGE+GMGLACGQ PE+V+ I
Sbjct: 650 IVIASIMCVYNKADWIELATKSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEIC 709
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G
Sbjct: 710 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIG 769
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 770 STKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQV 829
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVVDDY TGL+ LLYL + LK WDGQSPP HQKGKP + K
Sbjct: 830 CSAVQNQDFTVVDDYCTGLKALLYLSGAESLKNWDGQSPPIEKHQKGKPILL---QGQKK 886
Query: 804 IPNFGEYKKIRENL----ITELNL 823
+P FG+Y+ RE L ++E NL
Sbjct: 887 MPFFGKYRDEREKLEAIKLSESNL 910
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P FG+Y+ RE L +K S+ + +N + +T V + +V+DVIG+A+
Sbjct: 885 KKMPFFGKYRDEREKLEA---IKLSESNLLDTENYHFASRPDTQVSRVPTVEDVIGKALP 941
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DECTGC 559
R+ Y LDN++Q VA+I+DDMCINCGKCYM CNDSGYQAITF P THQ HVT D+CTGC
Sbjct: 942 RIGPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDPVTHQPHVTEDDCTGC 1001
Query: 560 TLCLSI 565
TLC S+
Sbjct: 1002 TLCYSV 1007
>gi|84579231|dbj|BAE73049.1| hypothetical protein [Macaca fascicularis]
Length = 468
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/373 (64%), Positives = 290/373 (77%), Gaps = 2/373 (0%)
Query: 61 VKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSK 120
+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P N +FQGLT + GFYTSK
Sbjct: 1 MKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAMFQGLTRDQGFYTSK 60
Query: 121 TFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
FLP VA SK G+C C LP ++G VIVLGAGDTAFDCATSALRCGA +V +VFRK
Sbjct: 61 DFLPLVAKGSKAGMCA-CH-SPLPSIRGVVIVLGAGDTAFDCATSALRCGARRVFIVFRK 118
Query: 181 GCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQ 240
G NIRAVPEE++LA EEKCEFLPF+SP +V VK +IAGMQF RTEQ+E G+W EDE+Q
Sbjct: 119 GFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIAGMQFVRTEQDETGKWNEDEDQ 178
Query: 241 RIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL 300
+ LKA+ +ISAFGS L D V EA+ P+K +++G PEV+ TM TS P VF GGD L
Sbjct: 179 MVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQTSEPWVFAGGDVIGL 238
Query: 301 SDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNP 360
++TTVESVNDGK A+W+IHKYIQ + ++ KP LP F + IDLVDISVE+ GLKF NP
Sbjct: 239 ANTTVESVNDGKQASWYIHKYIQSQYGSSISAKPELPLFYTPIDLVDISVEMAGLKFINP 298
Query: 361 FGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQG 420
FGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS +YGP Q
Sbjct: 299 FGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPMYGPGQS 358
Query: 421 SFLNIELISEKTA 433
SFLNIELISEKTA
Sbjct: 359 SFLNIELISEKTA 371
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 71/78 (91%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 388 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 447
Query: 624 SLWVRSSVKIPFFVKLTP 641
WVR +V+IPFF + P
Sbjct: 448 CRWVRQAVQIPFFCQADP 465
>gi|440793290|gb|ELR14477.1| hypothetical protein ACA1_192070 [Acanthamoeba castellanii str.
Neff]
Length = 1028
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/393 (56%), Positives = 301/393 (76%), Gaps = 6/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V FE+ L++DLGV+I+ + +DIT + L+KDG+ AIF+GIG P
Sbjct: 230 STEIPQFRLPYDVVQFELSLLQDLGVRIQYNTTFG-KDITFDSLQKDGHEAIFLGIGLPA 288
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ +F G+ E+ G++TSK FLPRV+ SK G+C CK + LP L G V+VLGAGDTAF
Sbjct: 289 PKKVEVFDGVGEKEGYFTSKDFLPRVSAGSKPGMCS-CKSD-LPDLHGRVVVLGAGDTAF 346
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATS+ RCGAN+V+V FR+G ++RAVPEE +LA EE+CEFLP+M P QV VK+ +I
Sbjct: 347 DCATSSFRCGANRVIVAFRRGIPDMRAVPEESELAKEERCEFLPYMQPKQVVVKEGRIVA 406
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++ + E+ + GE+ DE+Q I+LK +Y+ISAFGS +D D+ +A+ P+ K+G E++
Sbjct: 407 IELYKMEKGDDGEYRIDEDQFIRLKCDYVISAFGS-CIDPDLRKALAPLTFGKWGTAEID 465
Query: 281 YTTM-ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
TM AT P +FCGGD + T+VE+ NDGKTA+W++HKY+Q + L+VP++P LP+F
Sbjct: 466 TNTMQATHAPWLFCGGDMVG-NGTSVEATNDGKTASWYMHKYVQSLHGLSVPEEPQLPQF 524
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ ID VDIS+++ G++FPNPFGLASA P T+ M+RRAFE GWGFAVTKTFSL KD+VT
Sbjct: 525 YTPIDEVDISIDVAGIRFPNPFGLASATPCTSGDMIRRAFEAGWGFAVTKTFSLVKDLVT 584
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
N+SPRIV+GTTS H +GP QG+FLNIELISEKT
Sbjct: 585 NISPRIVRGTTSGHRFGPNQGAFLNIELISEKT 617
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 197/264 (74%), Gaps = 8/264 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC +NKDDW EL+KK +GADALELNLSCPHGMGERGMGLACGQ+P +VR+I
Sbjct: 636 VVIASIMCAFNKDDWQELTKKAVASGADALELNLSCPHGMGERGMGLACGQNPALVRDIC 695
Query: 625 LWVRSSVK-IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSL-SADGNPWPA 682
WV+ K +PFF KLTPN+T+I +IA AA EG A GV+AINT+SGLM + ++DG WP+
Sbjct: 696 RWVKEVAKDVPFFAKLTPNVTDIREIATAAKEGGATGVTAINTISGLMGIKTSDGGAWPS 755
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+G +K TTYGGVSGNATRP+ L+AVS+I PN+PIL GGIDSA+VALQF+Q GA V
Sbjct: 756 IGKEKKTTYGGVSGNATRPVALRAVSAIGNYLPNYPILATGGIDSAEVALQFLQCGASVV 815
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKG-WDGQSPPTPVHQKGKPAYQFRDKEG 801
QICS++QNQDFTVV DYITGL+ LYLKS + W+ QSP V PA R K+G
Sbjct: 816 QICSSIQNQDFTVVQDYITGLKAALYLKSREDHAEWEYQSPAVRVD----PA-AVRAKQG 870
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
+P+FG Y+ + L + L K
Sbjct: 871 TGLPHFGPYEDKNKALRKSVWLAK 894
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
Query: 442 AIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQR 501
+P+FG Y+ + L + L K LQ+ PK + ++ +V+G A+ R
Sbjct: 872 GLPHFGPYEDKNKALRKSVWLAK------DLQSPAPKPAPAPAPAKVFTLGEVLGTALPR 925
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+ Y +LDNK+QVVAL+++D CINCGKCYM CNDSGYQAI F +TH VTD+CTGCTL
Sbjct: 926 IGCYNDLDNKQQVVALVDEDKCINCGKCYMTCNDSGYQAIKFDAQTHIPTVTDDCTGCTL 985
Query: 562 CLSI 565
C S+
Sbjct: 986 CASV 989
>gi|358334609|dbj|GAA31156.2| dihydropyrimidine dehydrogenase (NADP+) [Clonorchis sinensis]
Length = 1060
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 300/417 (71%), Gaps = 26/417 (6%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKI-------ECERS-LSTRDITIEKLRKDGYTAI 92
+SEIPQ+RLP VN E+ ++DLGVK+ + ER+ +R I+I+ LR GY A+
Sbjct: 244 ASEIPQFRLPMPVVNRELRWMQDLGVKMYHNHQFGQTERNETGSRKISIQSLRNSGYGAV 303
Query: 93 FIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCK---KESLPILKGT 149
F+G G P A IP+F GLT E G+YTSK FLPRV+ +SK G+CG C + LP L+G
Sbjct: 304 FLGFGLPCAKQIPVFTGLTSEQGYYTSKHFLPRVSAASKPGMCG-CSLSMRPKLPDLRGK 362
Query: 150 -VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSP 208
V+VLGAGDTAFDCATSALRCGA +V VVFRKG T I VPEE+Q+AWEEKCEF PF+ P
Sbjct: 363 HVLVLGAGDTAFDCATSALRCGAARVHVVFRKGFTTISPVPEEMQMAWEEKCEFRPFLEP 422
Query: 209 VQVDVKDN------KIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV 262
++V + +I M+FN TEQ + G W + + ++++A+ IISAFG+ L D +
Sbjct: 423 LRVVCASDGTGGGERIVAMEFNPTEQLDDGAWNRNVDCTVRIRADVIISAFGAELSDESI 482
Query: 263 LEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
++A+ P+KL PEV+ T M TS P V+CGGD S T+VE+VNDGK AAW++H I
Sbjct: 483 IQALGPMKLGYNNLPEVDLTAMRTSAPDVWCGGDLTGHSHTSVEAVNDGKLAAWNMHVSI 542
Query: 323 QEK-----NNLTVP--DKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMV 375
QEK ++ VP D+P LP F + IDLVD+SVE+CG+KFPNPFGLASAPPTT+S+M+
Sbjct: 543 QEKFSEDDASIIVPKRDEPQLPLFTTPIDLVDVSVEVCGIKFPNPFGLASAPPTTSSAMI 602
Query: 376 RRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
RRAFE GWGFAVTKTF L KD++TNVSPRIV+ S HLYGPEQ +FLNIELISEKT
Sbjct: 603 RRAFEAGWGFAVTKTFGLNKDLITNVSPRIVRSQVSGHLYGPEQAAFLNIELISEKT 659
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 195/263 (74%), Gaps = 5/263 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC Y+K+DW +L+ T AG DALELNLSCPHGMGERGMGLACGQD +MVR+I
Sbjct: 678 VVIASIMCGYSKEDWEKLTDVTLTAGPDALELNLSCPHGMGERGMGLACGQDVKMVRDIC 737
Query: 625 LWVRSSV-KIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WV+ ++P F KLTPN+T I DIAKAA+EG ADGV+A NTVSGL+ + DG+ WP V
Sbjct: 738 AWVKQRAGRVPVFAKLTPNVTEIVDIAKAAHEGGADGVTATNTVSGLVEIRGDGSAWPKV 797
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G+++ TTYGG+SGNA RP+ L+ VS+IA+ P FPIL GGIDSA+ L F+ AGA +Q
Sbjct: 798 GSEERTTYGGLSGNAIRPIALRDVSAIARALPGFPILATGGIDSAEAGLSFLYAGASGLQ 857
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFT++DD+ITG++ LY+++ + W+ QSPPTP HQKGKP D G
Sbjct: 858 VCSAVQNQDFTIIDDFITGIKAGLYMRANKEFSSWNYQSPPTPKHQKGKPIAP--DLVGH 915
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG K E +E +++
Sbjct: 916 -VPHFGPAKLQTERYWSEKCVQR 937
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETI---LSVKDVI 495
L +P+FG K E +E +++ + S + I P +T + VKDVI
Sbjct: 912 LVGHVPHFGPAKLQTERYWSEKCVQRNAKESWSEYD----NSIQGPTQTTHKSVRVKDVI 967
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G A+ ++ ++ +L ++ VVA +++DMCINCGKCYM CNDSGYQAI F P+TH VT +
Sbjct: 968 GAALPKIGSFRDLSIEEHVVAEVDEDMCINCGKCYMTCNDSGYQAIQFDPKTHIPKVTTD 1027
Query: 556 CTGCTLCLSI 565
CTGC LCLS+
Sbjct: 1028 CTGCALCLSV 1037
>gi|345306396|ref|XP_003428461.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Ornithorhynchus anatinus]
Length = 1675
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/358 (63%), Positives = 277/358 (77%), Gaps = 2/358 (0%)
Query: 38 LPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIG 97
L SEIPQ+RLPFD VNFE+EL+KDLGVKI C +SLS +TI+ L+++GY A FIGIG
Sbjct: 178 LTSMSEIPQFRLPFDVVNFEIELMKDLGVKIICGKSLSVNGLTIQTLKEEGYKAAFIGIG 237
Query: 98 KPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGD 157
P N IFQ L+ + GFYTSK FLP VA +SK G+C C+ LP ++G VIVLGAGD
Sbjct: 238 LPEPNKDSIFQDLSVDQGFYTSKDFLPLVAKASKPGMCA-CRS-PLPSIQGAVIVLGAGD 295
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TAFDCATSALRCGA +V VVFRKG NIRAVPEE++LA EEKCEFLPF+SP +V +K +
Sbjct: 296 TAFDCATSALRCGARRVFVVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVILKGGR 355
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
I MQF RTEQ+E G+W EDE+Q ++LKA+ +ISAFGS L D V EA+ P+K +++G P
Sbjct: 356 IVAMQFVRTEQDETGKWKEDEDQIVQLKADVVISAFGSMLSDPQVKEALAPIKFNRWGLP 415
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
EV+ TM TS P VF GGD A L++TTVESVNDGK A+W+IHKY+Q + V KP LP
Sbjct: 416 EVDPETMQTSEPWVFAGGDLAGLANTTVESVNDGKQASWYIHKYLQSQYGAVVSAKPELP 475
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQK 395
F + IDLVDISVE+ GLKFPNPFGLASA P T++SM+RR+FE GWGFA+TKTFSL K
Sbjct: 476 VFCTPIDLVDISVEMAGLKFPNPFGLASATPATSASMIRRSFEAGWGFALTKTFSLDK 533
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/271 (66%), Positives = 209/271 (77%), Gaps = 1/271 (0%)
Query: 563 LSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRN 622
+ I+IASIMCTYNKDDW ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRN
Sbjct: 1284 IQIVIASIMCTYNKDDWTELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRN 1343
Query: 623 ISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA 682
I W+R +V+IPFF KLTPN+T+I IAKAAYEG ADGV+A NTVSGLM L ADG PWPA
Sbjct: 1344 ICRWIRQAVRIPFFAKLTPNVTDIVSIAKAAYEGGADGVTATNTVSGLMGLKADGTPWPA 1403
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
VG K TTYGGVSG A RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +
Sbjct: 1404 VGAGKKTTYGGVSGTAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVL 1463
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
Q+CSAVQNQDFTV++DY TGL+ LLYLKS +L WDGQSP T HQKGKP + + G
Sbjct: 1464 QVCSAVQNQDFTVIEDYCTGLKALLYLKSIEELNAWDGQSPVTERHQKGKPVPRIAELTG 1523
Query: 802 KAIPNFGEYKKIRENLITELNLKKLNSDGVS 832
K +P+FG Y + R +I E LK D S
Sbjct: 1524 KKLPSFGPYLEQRRKIIAENKLKLKEQDEAS 1554
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R +I E LK D S LP+++ P + I +VKDVIG+A++
Sbjct: 1524 KKLPSFGPYLEQRRKIIAENKLKLKEQDEAS---SLPEKKYFVPKKPIPAVKDVIGKALK 1580
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + +L+ + VVALI+++MCINCGKCYM CNDSGYQAI F PETH V D CTGCT
Sbjct: 1581 YIGTFGDLNKIEHVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVADSCTGCT 1640
Query: 561 LCLSI 565
LCLS+
Sbjct: 1641 LCLSV 1645
>gi|281208037|gb|EFA82215.1| dihydropyrimidine dehydrogenase [Polysphondylium pallidum PN500]
Length = 1012
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/393 (56%), Positives = 297/393 (75%), Gaps = 7/393 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLPFD V FEV+++ DLGVK+ + L D T+E L+ +GY A+++GIG P
Sbjct: 230 SAEIPQYRLPFDVVAFEVKMMTDLGVKVVYGKRLGA-DFTVESLKAEGYEAVYLGIGMPE 288
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
A V +F+GLT GFYTSK +LP V+ SK G+CG K LP L+G V+VLGAGDTAF
Sbjct: 289 AKVDRVFEGLTVGEGFYTSKDYLPLVSKGSKPGMCGCSAK--LPELRGRVVVLGAGDTAF 346
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA RCGA++V V FR+G +++RAVPEEV +A +E+CEFLPF+ P QV +D KI
Sbjct: 347 DCATSAFRCGASRVTVCFRRGFSDMRAVPEEVDIAKDERCEFLPFVLPKQVIKRDGKIVA 406
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F +TE+ + G++ DE+Q ++K +YIISAFGS + +V +A KP+ +K+G +++
Sbjct: 407 LEFYKTEKGDDGQYAVDEDQFFRVKCDYIISAFGSQI--GEVADACKPLTFNKWGLADID 464
Query: 281 YTTMATSV-PGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
+M + +FCGGD + TTVE+VNDGKTA+W+IHKY+Q + + +PD+P LP F
Sbjct: 465 TLSMQSKAQEWLFCGGDLVG-NGTTVEAVNDGKTASWNIHKYLQSLHGIPIPDQPQLPNF 523
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ IDLVDIS + CG+KF NPFGLASA P T+++M+RR+FE GWGFAVTKTFSL KD+VT
Sbjct: 524 FTPIDLVDISSDFCGIKFENPFGLASATPCTSAAMIRRSFEQGWGFAVTKTFSLDKDLVT 583
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
NVSPRIV+GTTS H +GP QG+FLNIELISEKT
Sbjct: 584 NVSPRIVRGTTSGHHFGPGQGAFLNIELISEKT 616
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 163/265 (61%), Positives = 197/265 (74%), Gaps = 13/265 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC +NK+DW EL+K E +GADALELNLSCPHGMGERGMGLACGQ+P++V +I
Sbjct: 635 VVIASIMCGFNKEDWQELAKMAEASGADALELNLSCPHGMGERGMGLACGQNPDLVLHIC 694
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFF KLTPN+T + +IA AAY G A GV+AINTVSGLMSL D +PWPA+G
Sbjct: 695 KWVREAIKIPFFAKLTPNVTEVKEIALAAYNGGATGVTAINTVSGLMSLKGDASPWPAIG 754
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRPM L+AVSSI + P+FPI+ GG DSAD +QF+ GA +QI
Sbjct: 755 KEKRTTYGGVSGNATRPMALRAVSSIRRTLPDFPIMATGGADSADTCIQFLHCGAGVIQI 814
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPP---TPVHQKGKPAYQFRDKE 800
CSAVQNQDFTVV DYITGL+ LY++S + L WDGQSPP TP Q+ K+
Sbjct: 815 CSAVQNQDFTVVQDYITGLKAYLYMQSREDLAQWDGQSPPLTLTPYAQR---------KK 865
Query: 801 GKAIPNFGEYKKIRENLITELNLKK 825
+P FG Y K R + E N KK
Sbjct: 866 YDNLPRFGNYLKDRIKMEVEDNQKK 890
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 81/126 (64%), Gaps = 7/126 (5%)
Query: 440 FQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAV 499
+ +P FG Y K R + E N KK + + P +T V SV+D I +A+
Sbjct: 866 YDNLPRFGNYLKDRIKMEVEDNQKK----DILKEPAQPVAGASTEVP---SVRDQINRAI 918
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGC 559
R+ Y +L+NK+QVVAL+++D+CINCGKCYM CNDSGYQAI F +TH HVTD CTGC
Sbjct: 919 PRIGVYNDLNNKEQVVALVDEDLCINCGKCYMTCNDSGYQAIKFDAKTHIPHVTDLCTGC 978
Query: 560 TLCLSI 565
LCLS+
Sbjct: 979 NLCLSV 984
>gi|328865277|gb|EGG13663.1| dihydropyrimidine dehydrogenase [Dictyostelium fasciculatum]
Length = 1016
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/394 (57%), Positives = 298/394 (75%), Gaps = 7/394 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLR-KDGYTAIFIGIGKP 99
SSEIPQYRL +DAV+FEV+L+KDLGVK+ ++L D TI+ L+ KDG+ A+++GIG P
Sbjct: 230 SSEIPQYRLAYDAVDFEVKLMKDLGVKVVYGKALGV-DFTIDSLKSKDGFDAVYLGIGMP 288
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159
A V +F GLT + GFYTSK +LP V+ SK GLCG CK +LP L G VIVLGAGDTA
Sbjct: 289 EAKVDSVFDGLTVKDGFYTSKDYLPLVSKGSKPGLCG-CK-SALPELHGRVIVLGAGDTA 346
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
FDCATSA RCGA++V V FR+ T++RAVPEEV +A +E+CEFLP++ P QV +D K+
Sbjct: 347 FDCATSAYRCGASRVTVAFRRAFTDMRAVPEEVDIAKDERCEFLPYVLPKQVIKRDGKVV 406
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
++F +TE+++ G + DE+Q ++K +YIISAFGS + D +++ A KP+ +K+G ++
Sbjct: 407 ALEFYKTEKDDSGNYGIDEDQFFRVKCDYIISAFGSQVGD-ELMTACKPLAFNKWGLADI 465
Query: 280 NYTT-MATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPK 338
+ + + +F GGD + TTVE+VNDGKTA+W IHKY+Q + + +PD P LP
Sbjct: 466 DVMSGQSKQAEWLFAGGDLIG-NGTTVEAVNDGKTASWAIHKYLQSLHGIPIPDTPQLPN 524
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + ID VDISV+ CG+KF NPFGLASA P T++SM+RR+FE GWGFAVTKTFSL KD+V
Sbjct: 525 FFTAIDQVDISVDFCGVKFENPFGLASATPCTSASMIRRSFEQGWGFAVTKTFSLDKDLV 584
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
TNVSPRIV+GTTS H +GP QG+FLNIELISEKT
Sbjct: 585 TNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKT 618
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 166/280 (59%), Positives = 203/280 (72%), Gaps = 15/280 (5%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC +NK+DW +L+ E +GAD LELNLSCPHGMGERGMGLACGQ+PE+V +I
Sbjct: 637 VVIASIMCGFNKEDWQQLAVMAEASGADMLELNLSCPHGMGERGMGLACGQNPELVLHIC 696
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFF KLTPN+T + +IA AAY G A GV+AINTVSGLM L D N WPAVG
Sbjct: 697 KWVREAIKIPFFAKLTPNVTEVKEIALAAYNGGATGVTAINTVSGLMGLKGDSNAWPAVG 756
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++K TTYGGVSGNATRPM L+AVSSI + P++PI+ GG DSAD +QF+ GA +QI
Sbjct: 757 SEKRTTYGGVSGNATRPMALRAVSSIRRALPDYPIMATGGADSADTCIQFLHCGASVIQI 816
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVV DYITGL+T LY++S + L WDGQS PT V KP KE +
Sbjct: 817 CSAVQNQDFTVVQDYITGLKTYLYMQSREDLLQWDGQSAPTSVT---KP------KERVS 867
Query: 804 I---PNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPRQ 840
+ P+FG+Y+K R L TE +K D + LP Q
Sbjct: 868 LVNAPHFGQYQKERNRLDTE--SRKSGEDLLVHAEPLPSQ 905
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Query: 444 PNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVE-TILSVKDVIGQAVQRV 502
P+FG+Y+K R L TE +K D + LP ++ +TPV+ + SV+D I +A+ R+
Sbjct: 872 PHFGQYQKERNRLDTES--RKSGEDLLVHAEPLPSQRTDTPVQGKVPSVQDQINRAIPRI 929
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y +L NK+QVVAL+++D+CINCGKCYM CNDSGY AI F +TH VTD CTGC LC
Sbjct: 930 GVYNDLSNKEQVVALVDEDLCINCGKCYMTCNDSGYTAIKFDAKTHIPLVTDLCTGCDLC 989
Query: 563 LSI 565
LS+
Sbjct: 990 LSV 992
>gi|66828195|ref|XP_647452.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum AX4]
gi|74859332|sp|Q55FT1.1|DPYD_DICDI RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|60475501|gb|EAL73436.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum AX4]
Length = 1009
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/398 (56%), Positives = 299/398 (75%), Gaps = 7/398 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIP YRL ++ V FE++L+KDLGVK+E + L T+E L+K GY AI++GIG P
Sbjct: 227 SSEIPNYRLNYEVVEFEIKLMKDLGVKVEYGKRLGENGFTVESLQKQGYEAIYLGIGMPE 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F LT + GF++SK FLP+V+ +SK G+CG CK + LP L G VIVLGAGDTAF
Sbjct: 287 PKIDPVFNELTSDQGFFSSKEFLPKVSKASKAGMCG-CKSQ-LPQLNGRVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA RCGA++V V FR+G +++RAVPEEV +A +E+CEFLP++ P QV +D K+
Sbjct: 345 DCATSAFRCGASRVTVCFRRGFSDMRAVPEEVDIAKDERCEFLPYVLPKQVIKRDGKVVA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F +TE+ + G + DE+Q ++K +YIISAFGS + V E+ P++ +K+G +++
Sbjct: 405 MEFYKTEKGDDGNYSVDEDQFFRVKCDYIISAFGSQI--GSVAESCSPLQFNKWGTADID 462
Query: 281 YTTMAT-SVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPD-KPCLPK 338
TM + +FCGGD + TTVE+VNDGKTA+W+IHKY+Q + + +PD P LP
Sbjct: 463 PMTMTSKHAEWLFCGGDLVG-NGTTVEAVNDGKTASWNIHKYLQSLHGIPIPDGPPQLPN 521
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDISVE+CG+KFPNPFGLASA P T+++M+RR+FE GWGFAVTKTFSL KD+V
Sbjct: 522 FFTPIDLVDISVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLV 581
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIF 436
TNVSPRIV+GTTS H +GP QG+FLNIELISEKT +
Sbjct: 582 TNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCHYW 619
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/274 (58%), Positives = 202/274 (73%), Gaps = 12/274 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC +NK+DW +L+K E +GAD +ELNLSCPHGMGE+GMGLACGQD E+V +I
Sbjct: 634 IVIASIMCGFNKEDWTQLAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELVFHIC 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++ ++PFF KLTPN+T I +IAKAA++G ADGV+AINTVSGLM L D N WPA+G
Sbjct: 694 QWVRAATRLPFFAKLTPNVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRP+ L+AVSSI K P++PI+ GG DSAD +QF+ GA VQI
Sbjct: 754 DEKRTTYGGVSGNATRPIALRAVSSIRKSLPDYPIMATGGADSADATIQFLHCGASVVQI 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTVV DYITGL+T LY++S + L WDGQSPP + K + + K
Sbjct: 814 CSSVQNQDFTVVQDYITGLKTYLYMQSREDLLQWDGQSPPNEIINK--------NPKLKG 865
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGL 837
+P FG+Y R + TE +K N D ++N L
Sbjct: 866 LPKFGKYLLERNRIDTE---EKQNIDLQKVKNPL 896
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 440 FQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAV 499
+ +P FG+Y R + TE +K N D ++N P P + S+KD I +A+
Sbjct: 863 LKGLPKFGKYLLERNRIDTE---EKQNIDLQKVKN--PLVPSPNPTHPVPSLKDQINRAI 917
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGC 559
R+ + +L +QVVALI++D CINCGKCYM CNDSGYQAI F +TH VTD CTGC
Sbjct: 918 PRIGRHDDLKRDQQVVALIDEDKCINCGKCYMTCNDSGYQAIKFDGKTHIPLVTDLCTGC 977
Query: 560 TLCLSI 565
LCLS+
Sbjct: 978 DLCLSV 983
>gi|33333732|gb|AAQ11981.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum]
Length = 1009
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/398 (55%), Positives = 297/398 (74%), Gaps = 7/398 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIP Y L ++ V FE++L+KDLGVK+E + L T+E L+K GY AI++GIG P
Sbjct: 227 SSEIPNYHLNYEVVEFEIKLMKDLGVKVEYGKRLGENGFTVESLQKQGYEAIYLGIGMPE 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F LT + GF++SK FLP+V+ +SK G+CG CK + LP L G VIVLGAGDTAF
Sbjct: 287 PKIDPVFNELTSDQGFFSSKEFLPKVSKASKAGMCG-CKSQ-LPQLNGRVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA RCGA++V V FR+G +++RAVPEEV +A +E+CEFLP++ P QV +D K+
Sbjct: 345 DCATSAFRCGASRVTVCFRRGFSDMRAVPEEVDIAKDERCEFLPYVLPKQVIKRDGKVVA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F +TE+ + G + DE+Q ++K +YIISAFGS + V E+ P++ +K+G +++
Sbjct: 405 MEFYKTEKGDDGNYSVDEDQFFRVKCDYIISAFGSQI--GSVAESCSPLQFNKWGTADID 462
Query: 281 YTTMAT-SVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPD-KPCLPK 338
TM + +FCGGD + TTVE+VNDGKTA+W+IHKY+Q + + +PD P LP
Sbjct: 463 PMTMTSKHAEWLFCGGDLVG-NGTTVEAVNDGKTASWNIHKYLQSLHGIPIPDGPPQLPN 521
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDI VE+CG+KFPNPFGLASA P T+++M+RR+FE GWGFAVTKTFSL KD+V
Sbjct: 522 FFTPIDLVDICVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLV 581
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIF 436
TNVSPRIV+GTTS H +GP QG+FLNIELISEKT +
Sbjct: 582 TNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCHYW 619
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/274 (58%), Positives = 202/274 (73%), Gaps = 12/274 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC +NK+DW +L+K E +GAD +ELNLSCPHGMGE+GMGLACGQD E+V +I
Sbjct: 634 IVIASIMCGFNKEDWTQLAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELVFHIC 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++ ++PFF KLTPN+T I +IAKAA++G ADGV+AINTVSGLM L D N WPA+G
Sbjct: 694 QWVRAATRLPFFAKLTPNVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRP+ L+AVSSI K P++PI+ GG DSAD +QF+ GA VQI
Sbjct: 754 DEKRTTYGGVSGNATRPIALRAVSSIRKSLPDYPIMATGGADSADATIQFLHCGASVVQI 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTVV DYITGL+T LY++S + L WDGQSPP + K + + K
Sbjct: 814 CSSVQNQDFTVVQDYITGLKTYLYMQSREDLLQWDGQSPPNEIINK--------NPKLKG 865
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGL 837
+P FG+Y R + TE +K N D ++N L
Sbjct: 866 LPKFGKYLLERNRIDTE---EKQNIDLQKVKNPL 896
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 440 FQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAV 499
+ +P FG+Y R + TE +K N D ++N P P + S+KD I +A+
Sbjct: 863 LKGLPKFGKYLLERNRIDTE---EKQNIDLQKVKN--PLVPSPNPTHPVPSLKDQINRAI 917
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGC 559
R+ + +L +QVVALI++D CINCGKCYM CNDSGYQAI F +TH VTD CTGC
Sbjct: 918 PRIGRHDDLKRDQQVVALIDEDKCINCGKCYMTCNDSGYQAIKFDGKTHIPLVTDLCTGC 977
Query: 560 TLCLSI 565
LCLS+
Sbjct: 978 DLCLSV 983
>gi|326925020|ref|XP_003208720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Meleagris
gallopavo]
Length = 1214
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/368 (60%), Positives = 270/368 (73%), Gaps = 7/368 (1%)
Query: 71 ERSLSTRDITIEKLRKDGYTAIFIGI-----GKPNANVIPIFQGLTEEMGFYTSKTFLPR 125
R ++ D+ + K G ++ I + G P N IFQGL + GFYTSK FLP
Sbjct: 479 HRPMANTDVYGRNIFKTGLISVLIYLKISVSGLPEPNRDSIFQGLKMDQGFYTSKDFLPL 538
Query: 126 VATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI 185
VA +SK G+C C LP + GTVIVLGAGDTAFDCATSALRCGA +V VVFRKG TNI
Sbjct: 539 VAVASKPGMCA-CH-SPLPSIHGTVIVLGAGDTAFDCATSALRCGARRVFVVFRKGFTNI 596
Query: 186 RAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLK 245
RAVPEE++LA EE+CEFLPF+SP +V +K+ I M+F RTEQ+ G W EDE+Q ++LK
Sbjct: 597 RAVPEEMELAKEERCEFLPFLSPRKVVLKNGHIVAMEFVRTEQDSDGNWKEDEDQVVRLK 656
Query: 246 ANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTV 305
+ +ISAFGS L D +V EA+ P+K +++G PEV+ TM TS P VF GGD + ++TTV
Sbjct: 657 VDVVISAFGSVLRDAEVREAMAPIKFNRWGLPEVDPETMQTSEPWVFAGGDISGHANTTV 716
Query: 306 ESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLAS 365
ESVNDGK A+W++H+YIQ V P LP F + +DLVDISV + GLKFPNPFG+AS
Sbjct: 717 ESVNDGKQASWYMHRYIQSLYGAAVSTTPELPLFYTPVDLVDISVLMAGLKFPNPFGIAS 776
Query: 366 APPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNI 425
A P T+SSM+RRAFE GWGFAVTKTFSL KD+VTNVSPRIV+G TS +YGP QGSFLNI
Sbjct: 777 ATPATSSSMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRIVRGITSGPIYGPGQGSFLNI 836
Query: 426 ELISEKTA 433
ELISEKTA
Sbjct: 837 ELISEKTA 844
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/247 (69%), Positives = 197/247 (79%), Gaps = 1/247 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+Y+KDDW ELSK E AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 862 ILIASIMCSYSKDDWTELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 921
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFF KLTPN+T+I +IA AA EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 922 RWVRQAVQIPFFAKLTPNVTDIVNIAMAAQEGGADGVTATNTVSGLMGLKADGTPWPAVG 981
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ ALQF+ +GA +Q+
Sbjct: 982 AGLRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESALQFLHSGASVLQV 1041
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV+DDY +GL+ LLYL S +L W+GQSP T HQKGKP D GK
Sbjct: 1042 CSAIQNQDFTVIDDYCSGLRALLYLNSIEELGDWNGQSPATMRHQKGKPVSGIADLIGKK 1101
Query: 804 IPNFGEY 810
+P+FG Y
Sbjct: 1102 LPSFGPY 1108
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 59/73 (80%)
Query: 493 DVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHV 552
DVIG+A+Q + Y EL N +QVVALI+++MCINCGKCYM CNDSGYQAI F ETH V
Sbjct: 1112 DVIGKALQYIGTYGELCNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDAETHLPTV 1171
Query: 553 TDECTGCTLCLSI 565
TD CTGCTLCLS+
Sbjct: 1172 TDSCTGCTLCLSV 1184
>gi|330795628|ref|XP_003285874.1| dihydropyrimidine dehydrogenase [Dictyostelium purpureum]
gi|325084179|gb|EGC37613.1| dihydropyrimidine dehydrogenase [Dictyostelium purpureum]
Length = 944
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/394 (56%), Positives = 292/394 (74%), Gaps = 7/394 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIP YRL ++ V FE++L+KDLGVK+E + L T+E L + GY +++GIG P
Sbjct: 162 SAEIPNYRLNYEVVEFEIKLMKDLGVKVEYGKRLGENGFTVESLHQQGYEVVYLGIGMPE 221
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ P+F GLT GFYTSK FLP V+ +SK G+CG CK + LP L G VIVLGAGDTAF
Sbjct: 222 PKIDPVFNGLTTPEGFYTSKEFLPLVSKASKAGMCG-CKSK-LPELNGRVIVLGAGDTAF 279
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA RCGA +V V FR+G +++RAVPEEV +A +E+CEFLP++ P QV +D K+
Sbjct: 280 DCATSAFRCGAKRVTVCFRRGFSDMRAVPEEVDIAKDERCEFLPYVLPKQVIKRDGKVVA 339
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F +TE+ + G + DE+Q ++K +YIISAFGS + V ++ KP+ +K+G +++
Sbjct: 340 MEFYKTEKGDDGNYAVDEDQFFRVKCDYIISAFGSQI--GSVADSCKPLTFNKWGTADID 397
Query: 281 YTTMAT-SVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTV-PDKPCLPK 338
TM + + VFCGGD + TTVE+VNDGKTA+W+IHKY+Q + + + D P LP
Sbjct: 398 PLTMQSKTAEWVFCGGDLVG-NGTTVEAVNDGKTASWNIHKYLQALHGIPILSDTPQLPN 456
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDISVE+CG+ FPNPFGLASA P T+++M+RR+FE GWGFAVTKTFSL KD+V
Sbjct: 457 FFTPIDLVDISVEMCGMTFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLV 516
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
TN SPRIV+GTTS H +GP QG+FLNIELISEKT
Sbjct: 517 TNCSPRIVRGTTSGHHFGPGQGAFLNIELISEKT 550
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/257 (63%), Positives = 196/257 (76%), Gaps = 9/257 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC +NK+DW EL+KK E +GAD LELNLSCPHGMGE+GMGLACGQD E+V +I
Sbjct: 569 IVIASIMCGFNKEDWTELAKKAEASGADGLELNLSCPHGMGEKGMGLACGQDTELVFHIC 628
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++VKIPFF KLTPN+T I DIAKAA++G ADGV+AINTVSGLM L D N WPA+G
Sbjct: 629 QWVRAAVKIPFFAKLTPNVTEIKDIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIG 688
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRPM L+AVSSI K P++PI+ GG DSAD +QF+ GA VQI
Sbjct: 689 DEKRTTYGGVSGNATRPMALRAVSSIRKTLPDYPIMATGGCDSADATIQFLHCGASVVQI 748
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTVV DYITGL+T LY++S + L WDGQSPP V R+ + +
Sbjct: 749 CSSVQNQDFTVVGDYITGLKTYLYMQSREDLLKWDGQSPPNEVIN--------RNPKLQG 800
Query: 804 IPNFGEYKKIRENLITE 820
+P FG+Y R + TE
Sbjct: 801 LPKFGKYLLERNRIDTE 817
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 440 FQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGL-PKRQINTPVETILSVKDVIGQA 498
Q +P FG+Y R + TE +K D + + N L P PV TI KD I +A
Sbjct: 798 LQGLPKFGKYLLERNRIDTE---EKQTKDLLQVTNPLTPSPNPTLPVPTI---KDQINRA 851
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+ R+ + +L +QVVA++++D CINCGKCYM CNDSGYQAI F +TH VTD CTG
Sbjct: 852 IPRIGRHDDLRRDQQVVAIVDEDKCINCGKCYMTCNDSGYQAIQFDGKTHIPLVTDLCTG 911
Query: 559 CTLCLSI 565
C LCLS+
Sbjct: 912 CDLCLSV 918
>gi|290996101|ref|XP_002680621.1| dihydroorotate dehydrogenase family protein [Naegleria gruberi]
gi|284094242|gb|EFC47877.1| dihydroorotate dehydrogenase family protein [Naegleria gruberi]
Length = 1038
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/397 (53%), Positives = 287/397 (72%), Gaps = 8/397 (2%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+ EIPQ RLP++AV FEV L+KDLGVK+E + L RD T+E L+ DGY AIF+GIG P+
Sbjct: 227 TQEIPQNRLPYEAVEFEVNLMKDLGVKVEYNKELG-RDFTVESLKNDGYEAIFLGIGLPD 285
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCK--KESLPILKGTVIVLGAGDT 158
N IF GLT E GFYTSK FLP V SSK G+CG CK + LP L G V++LG GDT
Sbjct: 286 PNKESIFDGLTPEQGFYTSKDFLPAVMQSSKDGICG-CKASNQKLPKLYGKVVILGIGDT 344
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A D S++RCGA+K ++VFR+G + +R V EE + A +EKC+ LP P Q+ +KD +I
Sbjct: 345 ALDVYGSSIRCGADKAVLVFRRGFSEMRCVEEEFEPAMKEKCDVLPNCLPKQIIMKDGRI 404
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
+G++ +TE + G+ V DE+Q I+LK ++++SAFG TL ++++++ PV ++ YG
Sbjct: 405 SGIELYKTEVDSNGKLVIDEDQFIRLKCDFVVSAFGCTLKSENIIKSLSPVAVNNYGRVP 464
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLT--VPDKPCL 336
+N TTM T V GVF GGD S TVE+ NDGKTA+W+IH+YIQE+ + + D P L
Sbjct: 465 INNTTMETEVKGVFAGGDLIG-SGMTVEASNDGKTASWYIHRYIQEELHKADRLSDAPQL 523
Query: 337 PKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKD 396
PKF + +D VDISVE+CG+KF NP+GLASAPP T + M+ RAF+ GWGFAVTKTF L KD
Sbjct: 524 PKFFTEVDKVDISVEVCGVKFENPYGLASAPPCTTADMIDRAFDAGWGFAVTKTFGLDKD 583
Query: 397 MVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
+VTNVSPRI++G+ + + GP Q +F+NIELISEK+A
Sbjct: 584 LVTNVSPRIIRGSVTTN-RGPHQSAFMNIELISEKSA 619
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/268 (57%), Positives = 189/268 (70%), Gaps = 17/268 (6%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIM + ++DW L+ K E+AGAD +ELNLSCPHGMGE+G+GLACG DP +V NI
Sbjct: 637 IVIASIMAAFKEEDWKFLATKAEQAGADMIELNLSCPHGMGEKGLGLACGMDPYLVLNIC 696
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ KIPFF KLTPN+T++ IA AA +G ADGV+A NTVSGLM+L D WPAVG
Sbjct: 697 KWVRAVTKIPFFAKLTPNVTDVLQIATAARDGGADGVTATNTVSGLMTLKPDATAWPAVG 756
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNA RP+ +KAVS +AK P +PIL GG DSADVALQFI AGA VQI
Sbjct: 757 ANKRTTYGGVSGNAIRPIAMKAVSKVAKNIPGYPILATGGCDSADVALQFIHAGASVVQI 816
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTV++DYITGL+ L+Y+ + KGW GQ+PP +K
Sbjct: 817 CSSVQNQDFTVIEDYITGLKALMYINAHPAFKGWTGQTPPVVEEKK------------VG 864
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGV 831
+P FG Y+ R EL++K++ GV
Sbjct: 865 LPRFGPYELKRR----ELDVKEIEEKGV 888
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 16/132 (12%)
Query: 442 AIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVET-----ILSVKDVIG 496
+P FG Y+ R EL++K++ GV + + N P E + S+ DV+
Sbjct: 864 GLPRFGPYELKRR----ELDVKEIEEKGVLTG----RHEDNMPAEIEQVIKVPSINDVVA 915
Query: 497 QAVQRVTNYTELDNK--KQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT- 553
+AV R+ ++ ELD K V+A+INDD CINCGKCY+ CNDSGYQAI+F +TH V+
Sbjct: 916 KAVPRIGSWGELDPKFDHHVIAVINDDKCINCGKCYLTCNDSGYQAISFDKDTHIPKVSD 975
Query: 554 DECTGCTLCLSI 565
D+CTGCTLC S+
Sbjct: 976 DDCTGCTLCYSV 987
>gi|313232715|emb|CBY19385.1| unnamed protein product [Oikopleura dioica]
Length = 1278
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/399 (53%), Positives = 283/399 (70%), Gaps = 25/399 (6%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQYRLP+D +++E LVKDLGVK+E R L R++++++LR DG AIF+GIG PN
Sbjct: 495 ASEIPQYRLPYDVIDWETNLVKDLGVKVEYGRELG-RNLSVQQLRDDGNAAIFLGIGLPN 553
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
PIF+ +SK G+C CK + LP L G V++LGAGDTAF
Sbjct: 554 PKSSPIFKA-------------------ASKAGMCS-CKTQ-LPELHGNVVILGAGDTAF 592
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNKIA 219
DCATSA+RCGA +V V FRKG NIRAVPEE LA +E+CEF+PF++P +V +D KI
Sbjct: 593 DCATSAIRCGARRVFVAFRKGVQNIRAVPEEADLARDERCEFMPFLNPEKVFTSEDGKIT 652
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
++F+RTEQ++ G W+ D++Q IK+KAN++ISAFGS L + + +A+ V+L+K+G P +
Sbjct: 653 AIEFHRTEQDDDGNWIVDDDQIIKVKANFVISAFGSGLTSDAIKDALG-VELNKWGTPVI 711
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPC-LPK 338
+ T T VF GGD +S +VE+ NDGKTA+W +H+++Q+K P LP
Sbjct: 712 DPDTGCTKSEDVFVGGDLTGISGMSVEAANDGKTASWSMHRFLQKKAKCEDPGTTAILPM 771
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + ID VDISVEICG++FPNPFGLASAPPTT S+M+RR+FE GWGF VTKTF D+V
Sbjct: 772 FHTPIDDVDISVEICGVRFPNPFGLASAPPTTNSAMIRRSFEAGWGFTVTKTFGCDHDLV 831
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFF 437
TNV+PRI +GTTS H YGP GSF+NIELISEK+A ++
Sbjct: 832 TNVAPRITRGTTSGHQYGPGLGSFINIELISEKSAEYWY 870
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 197/252 (78%), Gaps = 5/252 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+I+SIM +YNK+DW EL+ + KAGAD LELNLSCPHGMGERGMGLACGQ+ +MV NIS
Sbjct: 884 IVISSIMASYNKEDWQELAIGSCKAGADMLELNLSCPHGMGERGMGLACGQNTDMVYNIS 943
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WV+ +PFF K+TPNIT+IT IA+AA +G ADGV+A NTVSGLM + DG PWP VG
Sbjct: 944 KWVKEVTTVPFFPKMTPNITDITTIAQAAKDGGADGVTATNTVSGLMQIKGDGTPWPGVG 1003
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++K TTYGGV+GNA RP+ +KAVS+IA+ P FPIL GGIDSADV++Q+ AGA A+Q+
Sbjct: 1004 SEKKTTYGGVAGNAIRPIAMKAVSAIARAIPGFPILATGGIDSADVSMQYFNAGASAMQV 1063
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST----QLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
CSAVQNQD+TVV DYI+GL+TLLYLK +L WDGQSPPTP HQ GK +
Sbjct: 1064 CSAVQNQDYTVVQDYISGLKTLLYLKGKSSIGELTNWDGQSPPTPKHQLGKDIISCAEI- 1122
Query: 801 GKAIPNFGEYKK 812
GK IPNFG YK+
Sbjct: 1123 GKDIPNFGSYKQ 1134
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 8/142 (5%)
Query: 443 IPNFGEYKKIR-ENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQR 501
IPNFG YK+ + I +L + L +D + N P + I +V DVIG+ +
Sbjct: 1126 IPNFGSYKQEKILATIAKLADRDLLADSLKPNN----TTTIVPTKNIPTVADVIGRTLPN 1181
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHV-TDECTGCT 560
+ Y +LDNK+ VVAL++ DMCINCGKCYM CNDSGYQAI+F PETH V D CTGCT
Sbjct: 1182 IGKYGDLDNKQHVVALVDPDMCINCGKCYMTCNDSGYQAISFDPETHLPVVNNDTCTGCT 1241
Query: 561 LCLSI--LIASIMCTYNKDDWL 580
LC S+ +I I KD+++
Sbjct: 1242 LCFSVCPIIDCISMVPRKDEYV 1263
>gi|195438144|ref|XP_002066997.1| GK24771 [Drosophila willistoni]
gi|194163082|gb|EDW77983.1| GK24771 [Drosophila willistoni]
Length = 1045
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/402 (52%), Positives = 282/402 (70%), Gaps = 17/402 (4%)
Query: 43 EIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNAN 102
E PQ+RLP +AVNFEV LV+ LGV+ + L + D+ ++KL +G+ A+++GIG P+
Sbjct: 249 EFPQFRLPLEAVNFEVNLVRHLGVQFKNGMKLGSEDLNVQKLLMEGFDAVYLGIGLPDPV 308
Query: 103 VIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKE----SLPILKGTVIVLGAGDT 158
+PIFQ LT +MG+Y+SKTFLPRV++ SK G C GCKK+ LP L G V+V+GA
Sbjct: 309 SLPIFQDLTAQMGYYSSKTFLPRVSSGSKLGFCAGCKKKKIQFELPKLDGNVVVIGAEGG 368
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWE-EKCEFLPFMSPVQVDVKDNK 217
AF CA ALRCGA +V V F G ++I A PE+V+ A E E E LP++ P +V V+D K
Sbjct: 369 AFACARCALRCGAKRVYVAFLHGTSDIFATPEQVRQATEKEYVELLPYLMPTKVVVRDGK 428
Query: 218 IAGMQFNRTEQNEKG--EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
I GM+F+RT Q E+G E VEDE ++ L+ +Y+ISAFGST+ +N + +A+ PV++D+
Sbjct: 429 IEGMEFHRTIQTEEGNIEIVEDE--KMSLQVDYVISAFGSTVANNQLKKALYPVEIDERS 486
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPC 335
+V+ T+AT+VP VFCGGD A + T VE+VNDGK AA IH +Q K P +
Sbjct: 487 RVKVDPKTLATNVPRVFCGGDLAGIGHTVVEAVNDGKVAACSIHCMLQGKKLGMEPAE-- 544
Query: 336 LPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQK 395
LP F + ID VDISVE+ GLK+ NPFGLASAP TT+++M RRAFE+GWGFAVTKT L +
Sbjct: 545 LPLFHTEIDEVDISVEVNGLKYLNPFGLASAPSTTSAAMCRRAFEDGWGFAVTKTVVLDR 604
Query: 396 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFF 437
D VTNVSPRIV+G+T QGSF+NIEL+SEK A +F
Sbjct: 605 DEVTNVSPRIVRGSTH------HQGSFMNIELVSEKKADYWF 640
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/260 (53%), Positives = 186/260 (71%), Gaps = 8/260 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIMC Y + DW+EL+ G+DALELNLSCP+GM E+G+G QDP++V +I
Sbjct: 655 IICSIMCDYREADWVELATLAANCGSDALELNLSCPNGMAEKGLG----QDPKIVADICR 710
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
WVR ++KIPF+VKLTPN+T+I +IAKAA +GKA+GV+AINTVS LM L ADG PWPAVG
Sbjct: 711 WVRGAIKIPFYVKLTPNVTDIVEIAKAAVDGKANGVTAINTVSSLMDLRADGTPWPAVGA 770
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
++LT+YGG+SG+ RP+ L+A+S+IAK N ILG GG++S + ALQFI AGA VQI
Sbjct: 771 EQLTSYGGLSGSVIRPLALRAISAIAKKLQNIAILGTGGVESGETALQFIHAGASLVQIS 830
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQLKG----WDGQSPPTPVHQKGKPAYQFRDKEG 801
SA+QNQ+F +++DY + L+ LLYLK+ WDGQS P P+HQ+GKP R+
Sbjct: 831 SAIQNQNFAIIEDYCSSLRALLYLKANPPPNDGHLWDGQSLPQPLHQRGKPILPLRNSRN 890
Query: 802 KAIPNFGEYKKIRENLITEL 821
+ + FG RE I +L
Sbjct: 891 QPLGFFGADLCKRELCIEQL 910
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ + G A++ + ++ LD K+Q VALIN+D+CINCGKCYM C D+GYQAITF + H+
Sbjct: 942 SLAKLRGAALKHIGSFKALDVKQQQVALINEDLCINCGKCYMTCCDAGYQAITFDKDNHK 1001
Query: 550 AHVTDECTGCTLCLSI 565
V D CTGC LC S+
Sbjct: 1002 PLVGDNCTGCCLCHSV 1017
>gi|85683011|gb|ABC73481.1| CG2194 [Drosophila miranda]
Length = 347
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/297 (66%), Positives = 236/297 (79%), Gaps = 5/297 (1%)
Query: 138 CK-KESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAW 196
CK +SLP L G VIVLGAGDTAFDCATSALRCGA +V VVFRKG + IRAVPEEV+LA
Sbjct: 1 CKASQSLPKLHGNVIVLGAGDTAFDCATSALRCGARRVFVVFRKGSSGIRAVPEEVELAR 60
Query: 197 EEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256
EE+CE LP++SP +V +KD I GM+F RTEQNE+ EWVEDE+Q ++LKAN++ISAFGS
Sbjct: 61 EERCEMLPYLSPRKVCIKDGLITGMEFCRTEQNEQDEWVEDEDQTVRLKANFVISAFGSG 120
Query: 257 LLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAW 316
L D DV EA+ P+K + P V+ TTM +S+P VF GGD A +++TTVESVNDGK AAW
Sbjct: 121 LQDPDVREALSPLKF-RGELPVVDRTTMQSSLPQVFIGGDLAGVANTTVESVNDGKVAAW 179
Query: 317 HIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVR 376
IH ++Q +L + LP F + ID VDISVE+CGLKF NPFGLASAPPTT+++M+R
Sbjct: 180 SIHCHLQ---DLPLDTPAALPLFYTDIDSVDISVEMCGLKFENPFGLASAPPTTSTAMIR 236
Query: 377 RAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
RAFE GWGF VTKTF L KD+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 237 RAFEQGWGFVVTKTFGLDKDLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 293
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP 601
I+IASIMC++N+ DW ELS K E +GADALELNLSCP
Sbjct: 311 IVIASIMCSFNEADWTELSIKAEASGADALELNLSCP 347
>gi|307172628|gb|EFN63987.1| Dihydropyrimidine dehydrogenase [NADP+] [Camponotus floridanus]
Length = 383
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/254 (72%), Positives = 208/254 (81%), Gaps = 2/254 (0%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
MCTYNK DW EL+KK E AG+D LELNLSCPHGMGE GMGLACGQDPE+VRNIS WVR +
Sbjct: 1 MCTYNKADWTELAKKAEAAGSDGLELNLSCPHGMGESGMGLACGQDPELVRNISRWVREA 60
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
VKIPFFVKLTPNIT+I IAKAAYEGKADGV+AINTVSGLM L AD PWPAVG KLTT
Sbjct: 61 VKIPFFVKLTPNITDILSIAKAAYEGKADGVTAINTVSGLMGLYADATPWPAVGLNKLTT 120
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
YGGVSGNATRP L+ +S+++K P FPILG GG+DSADVALQF+ GA +QICSA+QN
Sbjct: 121 YGGVSGNATRPQALRIISTVSKHLPGFPILGAGGVDSADVALQFLHCGASVIQICSAIQN 180
Query: 751 QDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGE 809
QDFT++DDY+TGL+ LLYLKS Q+K WDGQSPPT HQKGKP + GK +P FGE
Sbjct: 181 QDFTLIDDYVTGLKALLYLKSLEQVKDWDGQSPPTFKHQKGKP-ISLQHALGKKVPYFGE 239
Query: 810 YKKIRENLITELNL 823
Y+K+RE I EL +
Sbjct: 240 YQKLREQKIAELKV 253
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 6/128 (4%)
Query: 439 LFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP-KRQINTPVETILSVKDVIGQ 497
L + +P FGEY+K+RE I EL K++S+ L +P R P+ I ++KD+IG+
Sbjct: 230 LGKKVPYFGEYQKLREQKIAEL---KVHSN--LLDKVVPVTRPAPKPIAPIPTIKDIIGK 284
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
A+ + NY +LDNKKQV+ALI+DD+CINCGKCYMAC DSGYQAITF P+TH VTD+CT
Sbjct: 285 ALIHIGNYRDLDNKKQVIALIDDDLCINCGKCYMACADSGYQAITFDPDTHIPKVTDDCT 344
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 345 GCTLCLSV 352
>gi|323650140|gb|ADX97156.1| dihydropyrimidine dehydrogenase [NADP+] [Perca flavescens]
Length = 619
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 215/266 (80%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+++I+SIMC+YNK+DW EL+K E++GADALELNLSCPHGMGERGMGLACGQDP +VRNI
Sbjct: 231 NVVISSIMCSYNKEDWTELAKMAEESGADALELNLSCPHGMGERGMGLACGQDPVLVRNI 290
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR+++ IPFF KLTPN+TNI DIAKAA+EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 291 CRWVRAAISIPFFAKLTPNVTNIVDIAKAAHEGGADGVTATNTVSGLMGLKADGSPWPSV 350
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
GT K TTYGGVSGNA RP+ L+AVS+IAK P FPIL GGIDSA+ LQF+ AGA +Q
Sbjct: 351 GTDKRTTYGGVSGNAIRPIALRAVSAIAKAIPGFPILATGGIDSAESGLQFLHAGASVLQ 410
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+CSA+QNQDFTV++DY GL+ LLYLKS +LK WDGQSPPT HQKGKP + D GK+
Sbjct: 411 VCSAIQNQDFTVIEDYCVGLKALLYLKSLELKDWDGQSPPTERHQKGKPVPRLEDLVGKS 470
Query: 804 IPNFGEYKKIRENLITELNLKKLNSD 829
+P+FG Y + R + I E K N++
Sbjct: 471 LPSFGPYLQQRTDAIAEYKKKLRNNN 496
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 176/214 (82%)
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
G+QF RTEQ ++G+W EDE+Q ++LKA+YIISAFGS L + V EA+ PVK+ ++G PEV
Sbjct: 1 GLQFCRTEQTDEGDWKEDEDQIVRLKADYIISAFGSMLNEPRVSEAMAPVKMTRWGTPEV 60
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
N TM TS P VF GGD A L++TTVESVNDGK A+WHIH+YIQ + TV P LP F
Sbjct: 61 NTDTMQTSEPWVFAGGDIAGLANTTVESVNDGKQASWHIHRYIQSLHGQTVDPVPKLPLF 120
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
S ID VDISVE+CG+KFPNPFGLASAPPTT+++M+RRAFE GWGFA+TKTF L KD+VT
Sbjct: 121 YSAIDQVDISVEMCGIKFPNPFGLASAPPTTSTAMIRRAFEQGWGFALTKTFGLDKDLVT 180
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
NVSPRIV+GTTS HL+GP QGSFLNIELISEKTA
Sbjct: 181 NVSPRIVRGTTSGHLFGPGQGSFLNIELISEKTA 214
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+++P+FG Y + R + I E K N++ ++ + RQ+NTP + + +VKDVI +A++
Sbjct: 469 KSLPSFGPYLQQRTDAIAEYKKKLRNNNDDVIKADI--RQVNTPHKAVPAVKDVIARALR 526
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y +L N +QV ALI+++MCINCGKCYM C+DSGYQAITFHPETH V D CTGCT
Sbjct: 527 HIGAYQDLSNMEQVQALIDEEMCINCGKCYMTCSDSGYQAITFHPETHLPMVNDSCTGCT 586
Query: 561 LCLSI 565
LCLS+
Sbjct: 587 LCLSV 591
>gi|389609435|dbj|BAM18329.1| suppressor of rudimentary [Papilio xuthus]
Length = 583
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/267 (69%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIMC+YN+ DW EL++K E AG+DALELNLSCPHGMGE GMGLACGQDP +V+ IS
Sbjct: 184 VVIASIMCSYNEQDWTELARKAEAAGSDALELNLSCPHGMGESGMGLACGQDPVLVKGIS 243
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR ++KIPFF+KLTPNIT+I IA AA+EG A GVSAINTVSGLMS++A+ PWPAVG
Sbjct: 244 QWVRKAIKIPFFIKLTPNITDIVSIAMAAHEGGAYGVSAINTVSGLMSVTANATPWPAVG 303
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSGNATRPMGL+AVS+IA P FPILGIGGIDSAD A QFI GA VQI
Sbjct: 304 NTKSTTYGGVSGNATRPMGLRAVSAIANKLPGFPILGIGGIDSADSAFQFILCGAPVVQI 363
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAI 804
CSAVQNQDFTVVDDYITGL+ LLYL+S L GW GQSPPT HQKGKP D EGK +
Sbjct: 364 CSAVQNQDFTVVDDYITGLKALLYLRSLGLDGWTGQSPPTHKHQKGKPVQTLMD-EGKVL 422
Query: 805 PNFGEYKKIRENLITELNLKK--LNSD 829
+FG YKK RE L+ + K +N D
Sbjct: 423 GHFGPYKKKREELLKTIRQKSDLINGD 449
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 132/166 (79%), Gaps = 8/166 (4%)
Query: 269 VKLDKYGYPEVNYTTM-ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
VKL+++G PEV+ +TM + S VF GGD A +++TTVESVNDGKTAAW++H Y+Q
Sbjct: 4 VKLNRWGLPEVDSSTMQSVSNAKVFIGGDLAGVAETTVESVNDGKTAAWYMHCYLQ---- 59
Query: 328 LTVP-DKPC-LPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGF 385
+P D P LPKF ID VD+SVE+CG+KF NPFGLASAPPTT+S+M+RRAF+ GWGF
Sbjct: 60 -GIPFDSPVELPKFHCPIDEVDLSVEVCGIKFENPFGLASAPPTTSSAMIRRAFQQGWGF 118
Query: 386 AVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEK 431
AVTKTF L KD+VTNVSPRIV+G TS YGP QGSFLNIELISEK
Sbjct: 119 AVTKTFGLDKDLVTNVSPRIVRGVTSGENYGPGQGSFLNIELISEK 164
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 26/139 (18%)
Query: 441 QAIPNFGEYKKIRENLITELN--------------LKKLNSDGVSLQNGLPKRQINTPVE 486
+ + +FG YKK RE L+ + L N++G+S +PK
Sbjct: 420 KVLGHFGPYKKKREELLKTIRQKSDLINGDANDCYLNYNNTNGISQDCEVPK-------- 471
Query: 487 TILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE 546
+KDV+G+A+ R+ Y +LDN KQVVALI+DDMCINCGKCYMAC DSGYQAI F P
Sbjct: 472 ----IKDVLGEALPRIGPYKKLDNTKQVVALIDDDMCINCGKCYMACADSGYQAIEFDPN 527
Query: 547 THQAHVTDECTGCTLCLSI 565
+H HVTD+CTGCTLCLS+
Sbjct: 528 SHIPHVTDDCTGCTLCLSV 546
>gi|170040022|ref|XP_001847813.1| dihydropyrimidine dehydrogenase [Culex quinquefasciatus]
gi|167863593|gb|EDS26976.1| dihydropyrimidine dehydrogenase [Culex quinquefasciatus]
Length = 585
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/312 (58%), Positives = 230/312 (73%), Gaps = 5/312 (1%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQYRLP+D VNFE++LVKDLGVK E R+LST+DIT++ L G A+F+GIG P
Sbjct: 227 SAEIPQYRLPYDVVNFEIQLVKDLGVKFETGRALSTKDITVQGLLDGGNDAVFLGIGLPQ 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKES--LPILKGTVIVLGAGDT 158
+ +F GLT++ GFYTSK FLP V+ SK GLC CK + LP L G VIVLGAGDT
Sbjct: 287 PKIDKVFVGLTQDQGFYTSKDFLPMVSDGSKPGLCL-CKAAASRLPTLSGNVIVLGAGDT 345
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
AFDCATSALRCGA +V VVFRKG NIRAVPEEV+LA EE+CEF+PFMSP QV VKD KI
Sbjct: 346 AFDCATSALRCGARRVFVVFRKGNNNIRAVPEEVELAREERCEFIPFMSPKQVIVKDGKI 405
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
+ ++F RTEQ++ G WVED +Q +LKANY+ISAFGS L D DV++A+ PV L+++ P+
Sbjct: 406 SAVEFIRTEQDDTGNWVEDADQTTRLKANYVISAFGSGLSDEDVIKALSPVPLNRWNLPQ 465
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPK 338
V+ T T +P VFCGGD A ++TTVESVNDGKTAAW++H Y+Q + VP
Sbjct: 466 VDSKTQQTQLPTVFCGGDLAGAAETTVESVNDGKTAAWYMHCYLQGLSFDAVPSSAVYTN 525
Query: 339 FMSHIDLVDISV 350
H+D ++ V
Sbjct: 526 --RHVDCRELRV 535
>gi|149025817|gb|EDL82060.1| rCG28563 [Rattus norvegicus]
Length = 557
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 169/263 (64%), Positives = 210/263 (79%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 167 NILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 226
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR SV++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 227 CRWVRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGSPWPSV 286
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G+ K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 287 GSGKRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 346
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L WDGQSPPT HQKGKP + G+
Sbjct: 347 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQSPPTMSHQKGKPVPHIAELMGQ 406
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ ++ +++
Sbjct: 407 KLPSFGPYLERRKKILAASKIRE 429
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 122/150 (81%)
Query: 284 MATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHI 343
M TS P VF GGD +++TTVESVNDGK A+W+IH+YIQ + VP +P LP F + +
Sbjct: 1 MQTSEPWVFAGGDVVGMANTTVESVNDGKQASWYIHEYIQAQYGALVPSQPTLPLFYTPV 60
Query: 344 DLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSP 403
DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTNVSP
Sbjct: 61 DLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSP 120
Query: 404 RIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
RI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 121 RIIRGTTSGPLYGPGQSSFLNIELISEKTA 150
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 89/128 (69%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ ++ +++ + + + L ++ N+ + I ++KDVIG+
Sbjct: 403 LMGQKLPSFGPYLERRKKILAASKIREKDQNRAC--SPLQRKHFNSQ-KPIPAIKDVIGK 459
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + EL+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 460 SLQYLGTFGELNVMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 519
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 520 GCTLCLSV 527
>gi|301608531|ref|XP_002933845.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Xenopus
(Silurana) tropicalis]
Length = 898
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 207/267 (77%), Gaps = 1/267 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNKDDW EL+ E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 508 NILIASIMCSYNKDDWTELALMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 567
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +VKIPFF KLTPN+T++ IA AA EG ADGV+A NTVSGLM L AD PWPAV
Sbjct: 568 CRWVRQAVKIPFFAKLTPNVTDVVKIAMAAQEGGADGVTATNTVSGLMGLKADATPWPAV 627
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 628 GRGSRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 687
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV++DY TGL+ LLYLKS +L+ WDGQSPPT HQKGKP + +G+
Sbjct: 688 VCSAVQNQDFTVIEDYCTGLKALLYLKSIDELQDWDGQSPPTIRHQKGKPVPTIAEIKGE 747
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
+P+FG Y + R+ ++ E + L +
Sbjct: 748 KLPSFGPYLEKRKRILAENKINDLTCN 774
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 199/313 (63%), Gaps = 21/313 (6%)
Query: 141 ESLPI-LKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRK---GCTNIRAVPEEVQLAW 196
E++P K + ++GAG + CA+ R G + + V ++ G + +P+ +L +
Sbjct: 180 EAMPAQYKTKIALIGAGPASISCASFLARLGYSDITVFEKQKYLGGLSTSEIPQ-FRLPY 238
Query: 197 EEKCEFLPFMSPVQVDVKDNKIAGMQ-FNRTEQNEKG------------EWVEDEEQRIK 243
+ + M + V V + K GM N E+G ++D +
Sbjct: 239 DVVSFEIELMKDLGVKVIEGKGLGMNGMNIRSLKEEGFKAIFIGIGLPQPKIDDVFTGLT 298
Query: 244 LKANYIISAFGSTLL---DNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL 300
+ + S L+ VLEA+KP+K +++G PE + TM TS GVF GGD A L
Sbjct: 299 TEHGFYTSKDFLPLVAKASKQVLEAMKPIKFNRWGLPEADPVTMQTSEAGVFVGGDIAGL 358
Query: 301 SDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNP 360
++TTVESVNDGK A+WHIHK+IQ + +++ +KP LP F + IDLVDISVE+ G+KFPNP
Sbjct: 359 ANTTVESVNDGKQASWHIHKHIQSLHGVSITNKPELPLFYTPIDLVDISVEMVGIKFPNP 418
Query: 361 FGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQG 420
FGLASAPPTT++ M+RRAFE GWGFA+TKTFSL+KD+VTNVSPRI++GTTS +YGP QG
Sbjct: 419 FGLASAPPTTSAPMIRRAFEAGWGFALTKTFSLEKDIVTNVSPRIIRGTTSGSIYGPGQG 478
Query: 421 SFLNIELISEKTA 433
SFLNIELISEKTA
Sbjct: 479 SFLNIELISEKTA 491
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ ++ E + L + + ++ P + I SVKDVIG+A+Q
Sbjct: 747 EKLPSFGPYLEKRKRILAENKINDLTCNTSPVTK---EKTHFVPNKPIPSVKDVIGRALQ 803
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ +Y++L+ ++QVVALI+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 804 YIGSYSQLNIQEQVVALIDEEMCINCGKCYMTCNDSGYQAIEFDPETHLTTVTDSCTGCT 863
Query: 561 LCLSI 565
LCLS+
Sbjct: 864 LCLSV 868
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 68/94 (72%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D V+FE+EL+KDLGVK+ + L + I L+++G+ AIFIGIG P
Sbjct: 228 TSEIPQFRLPYDVVSFEIELMKDLGVKVIEGKGLGMNGMNIRSLKEEGFKAIFIGIGLPQ 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGL 134
+ +F GLT E GFYTSK FLP VA +SK+ L
Sbjct: 288 PKIDDVFTGLTTEHGFYTSKDFLPLVAKASKQVL 321
>gi|28386052|gb|AAH44730.1| Dpyd protein [Mus musculus]
Length = 512
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 207/263 (78%), Gaps = 1/263 (0%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 122 NILIASIMCSYNKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 181
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 182 CRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 241
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G + TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 242 GIGRRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 301
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS +L WDGQSPP HQKGKP + + G+
Sbjct: 302 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELADWDGQSPPIISHQKGKPVPRVAELMGQ 361
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I +++
Sbjct: 362 KLPSFGPYLEQRKKIIAASKIRQ 384
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 87/101 (86%)
Query: 333 KPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFS 392
+P +P F + +DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFS
Sbjct: 5 QPTMPLFYTPVDLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFS 64
Query: 393 LQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
L KD+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 65 LDKDIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTA 105
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ +I +++ D + + L ++ N+ + I ++KDVIG+
Sbjct: 358 LMGQKLPSFGPYLEQRKKIIAASKIRQ--KDQNTACSPLQRKHFNS-QKPIPAIKDVIGK 414
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + E+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 415 SLQYLGTFGEMSIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 474
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 475 GCTLCLSV 482
>gi|431896403|gb|ELK05815.1| Dihydropyrimidine dehydrogenase [NADP+] [Pteropus alecto]
Length = 368
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 167/239 (69%), Positives = 194/239 (81%), Gaps = 1/239 (0%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC+YN++DW+ELS+ E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 62 IVIASIMCSYNRNDWMELSQMAETSGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 121
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR SV++PFF KLTPN+T+I IAKAA EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 122 RWVRQSVQVPFFAKLTPNVTDIVSIAKAAKEGGADGVTATNTVSGLMGLKADGTPWPAVG 181
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K TTYGGVSG A RP+ LKAV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 182 IGKRTTYGGVSGTAIRPIALKAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 241
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
CSAVQNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP Q + GK
Sbjct: 242 CSAVQNQDFTVIEDYCTGLRALLYLKSIEELQDWDGQSPATVSHQKGKPVPQIPELTGK 300
>gi|432103874|gb|ELK30707.1| Dihydropyrimidine dehydrogenase [NADP+] [Myotis davidii]
Length = 698
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/307 (55%), Positives = 211/307 (68%), Gaps = 42/307 (13%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIMC+YN++DW+EL+ E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 268 VLIASIMCSYNRNDWMELASMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 327
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +++IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 328 RWVRQAIRIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLRADGTPWPAVG 387
Query: 685 TKKLTTYGGVSGN-----------------------------------------ATRPMG 703
K TTYGGVSG+ A RP+
Sbjct: 388 AGKRTTYGGVSGHRRTYHPAFKKQQRLVRKEHDALTQEDDIIDLGPGWRGSLGTAIRPIA 447
Query: 704 LKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763
L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q+CSAVQNQDFTV++DY TGL
Sbjct: 448 LRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIEDYCTGL 507
Query: 764 QTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITELN 822
+ LLYL++ +L+ WDGQSP TP HQKGKP + + GK +P+FG Y + R+ +I E
Sbjct: 508 RALLYLQAIEELRDWDGQSPATPRHQKGKPVPRIAELVGKKLPSFGPYLEQRKKIIAESK 567
Query: 823 LKKLNSD 829
L+ +D
Sbjct: 568 LRPKGAD 574
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/250 (61%), Positives = 186/250 (74%), Gaps = 8/250 (3%)
Query: 192 VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIIS 251
++LA EEKCEFLPF+SP +V VK KI GMQF RTEQ+E G W EDEEQR++L+A+ +IS
Sbjct: 1 MELAKEEKCEFLPFLSPRKVLVKGGKIVGMQFVRTEQDEAGVWREDEEQRVQLRADVVIS 60
Query: 252 AFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDG 311
AFGS L D V EA+ P+K +++G PEV+ TM TS P VF GGD +++TTVESVNDG
Sbjct: 61 AFGSVLSDPQVKEALSPIKFNRWGLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDG 120
Query: 312 KTAAWHIHKYIQEKNNLTVPD--------KPCLPKFMSHIDLVDISVEICGLKFPNPFGL 363
K A+W IH+YIQ + P F + IDLVDISVE+ GL+F NPFGL
Sbjct: 121 KQASWFIHRYIQSQFAAAPPGXXXXXXXXXXXXXXFHTPIDLVDISVEMAGLRFINPFGL 180
Query: 364 ASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFL 423
ASA P T+++M+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS YGP Q SFL
Sbjct: 181 ASATPATSTTMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPSYGPGQSSFL 240
Query: 424 NIELISEKTA 433
NIELISEKTA
Sbjct: 241 NIELISEKTA 250
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y + R+ +I E L+ +D +RQI P + + ++KDVIG+ +Q +
Sbjct: 549 LPSFGPYLEQRKKIIAESKLRPKGADEACQPL---QRQIFAPTKPVPAIKDVIGRTLQYL 605
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
+ +L ++QVVALI++DMCINCGKCYM CNDSGYQAI F PETH V D CTGCTLC
Sbjct: 606 GTFGDLSIEEQVVALIDEDMCINCGKCYMTCNDSGYQAIQFDPETHLPSVGDACTGCTLC 665
Query: 563 LSI 565
LS+
Sbjct: 666 LSV 668
>gi|313213832|emb|CBY40684.1| unnamed protein product [Oikopleura dioica]
Length = 711
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/300 (56%), Positives = 223/300 (74%), Gaps = 3/300 (1%)
Query: 140 KESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEK 199
K LP L G V++LGAGDTAFDCATSA+RCGA +V V FRKG NIRAVPEE LA +E+
Sbjct: 5 KTQLPELHGNVVILGAGDTAFDCATSAIRCGARRVFVAFRKGIQNIRAVPEEADLARDER 64
Query: 200 CEFLPFMSPVQV-DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL 258
CEF+PF++P +V +D KI ++F+RTEQ++ G W+ D++Q IK+KAN++ISAFGS L
Sbjct: 65 CEFMPFLNPEKVFTSEDGKITAIEFHRTEQDDDGNWIVDDDQIIKVKANFVISAFGSGLT 124
Query: 259 DNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHI 318
+ + +A+ V+L+K+G P ++ T T VF GGD +S +VE+ NDGKTA+W +
Sbjct: 125 SDAIKDALG-VELNKWGTPVIDPDTGCTKSEDVFVGGDLTGISGMSVEAANDGKTASWSM 183
Query: 319 HKYIQEKNNLTVPDKPC-LPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRR 377
H+++Q+K P LP F + ID VDISVEICG++FPNPFGLASAPPTT S+M+RR
Sbjct: 184 HRFLQKKAKCEDPGTTAILPMFHTPIDDVDISVEICGVRFPNPFGLASAPPTTNSAMIRR 243
Query: 378 AFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFF 437
+FE GWGF VTKTF D+VTNV+PRI +GTTS H YGP GSF+NIELISEK+A ++
Sbjct: 244 SFEAGWGFTVTKTFGCDHDLVTNVAPRITRGTTSGHQYGPGLGSFINIELISEKSAEYWY 303
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 197/252 (78%), Gaps = 5/252 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+I+SIM +YNK+DW EL+ + KAGAD LELNLSCPHGMGERGMGLACGQ+ +MV NIS
Sbjct: 317 IVISSIMASYNKEDWQELAIGSCKAGADMLELNLSCPHGMGERGMGLACGQNTDMVYNIS 376
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WV+ +PFF K+TPNIT+IT IA+AA +G ADGV+A NTVSGLM + DG PWP VG
Sbjct: 377 KWVKEVTTVPFFPKMTPNITDITTIAQAAKDGGADGVTATNTVSGLMQIKGDGTPWPGVG 436
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++K TTYGGV+GNA RP+ +KAVS+IA+ P FPIL GGIDSADV++Q+ AGA A+Q+
Sbjct: 437 SEKKTTYGGVAGNAIRPIAMKAVSAIARAIPGFPILATGGIDSADVSMQYFNAGASAMQV 496
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKST----QLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
CSAVQNQD+TVV DYI+GL+TLLYLK +L WDGQSPPTP HQ GK +
Sbjct: 497 CSAVQNQDYTVVQDYISGLKTLLYLKGKSSIGELTNWDGQSPPTPKHQLGKDIISCAEI- 555
Query: 801 GKAIPNFGEYKK 812
GK IPNFG YK+
Sbjct: 556 GKDIPNFGSYKQ 567
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 8/142 (5%)
Query: 443 IPNFGEYKKIR-ENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQR 501
IPNFG YK+ + I +L + L +D + N P + I +V DVIG+ +
Sbjct: 559 IPNFGSYKQEKILATIAKLADRDLLADSLKPNN----TTTIVPTKNIPTVADVIGRTLPN 614
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHV-TDECTGCT 560
+ Y +LDNK+ VVAL++ DMCINCGKCYM CNDSGYQAI+F PETH V D CTGCT
Sbjct: 615 IGKYGDLDNKQHVVALVDPDMCINCGKCYMTCNDSGYQAISFDPETHLPVVNNDTCTGCT 674
Query: 561 LCLSI--LIASIMCTYNKDDWL 580
LC S+ +I I KD+++
Sbjct: 675 LCFSVCPIIDCISMVPRKDEYV 696
>gi|195168436|ref|XP_002025037.1| GL26798 [Drosophila persimilis]
gi|194108482|gb|EDW30525.1| GL26798 [Drosophila persimilis]
Length = 393
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/259 (66%), Positives = 201/259 (77%), Gaps = 5/259 (1%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
MC++N+ DW ELS K E +GADALELNLSCPHGMGERGMGLACGQ P+MV IS WVR++
Sbjct: 1 MCSFNEADWTELSIKAEASGADALELNLSCPHGMGERGMGLACGQIPDMVEQISRWVRNA 60
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
VK+PFF+KLTPNIT+IT IAKAA G ADG SAINTV GLM L AD WPAVG +K TT
Sbjct: 61 VKLPFFIKLTPNITDITAIAKAAKLGGADGCSAINTVQGLMGLKADATAWPAVGEEKRTT 120
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
YGGVSGNATRPM L+A+S IAK P+FPILGIGGIDS +VALQF+QAGA +QICS+VQN
Sbjct: 121 YGGVSGNATRPMALRAISEIAKKIPDFPILGIGGIDSGEVALQFLQAGATVLQICSSVQN 180
Query: 751 QDFTVVDDYITGLQTLLYLKST--QLKG--WDGQSPPTPVHQKGKPAYQFRDKEGKAIPN 806
QDFT++DDY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP GK +
Sbjct: 181 QDFTLIDDYCTSLKALLYLKANPPPVNGAFWDGQSPPTPVHQKGKPVVHLTGV-GKKLGF 239
Query: 807 FGEYKKIRENLITELNLKK 825
FG Y++ R+ + + +K
Sbjct: 240 FGPYQRERDITLAGIRSEK 258
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 60/75 (80%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
V D+IG A+ R+ Y +LDNK+Q VALINDDMCINCGKCYM C DSGYQAI F +TH
Sbjct: 284 VADIIGAALPRIGTYNQLDNKQQKVALINDDMCINCGKCYMTCADSGYQAIKFDKDTHLP 343
Query: 551 HVTDECTGCTLCLSI 565
HV D+CTGCTLC+S+
Sbjct: 344 HVNDDCTGCTLCVSV 358
>gi|1561730|gb|AAC47288.1| Dreg-3 protein [Drosophila melanogaster]
Length = 626
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/267 (58%), Positives = 195/267 (73%), Gaps = 10/267 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N++DW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 227 IVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 286
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA + SAINTV GLM L AD WPA+G
Sbjct: 287 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKR-EEPMRSAINTVQGLMGLKADSTAWPAIG 345
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 346 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIHAGATVLQI 405
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQLK-----GWDGQSPPTPVHQKGKPAYQFRDK 799
CS+VQNQDFTV++DY T L+ LLYLK + + G P + ++ + + D+
Sbjct: 406 CSSVQNQDFTVIEDYCTALKALLYLKRIRHQSMVPSGMASHHPRRSIRRQARCPF---DR 462
Query: 800 EGKA-IPNFGEYKKIRENLITELNLKK 825
GKA + FG Y++ R+ + EL +K
Sbjct: 463 RGKATLGFFGPYQRQRDIKMAELRSQK 489
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D DV A+ P++ + P V+
Sbjct: 1 MEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVD 59
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM +SV VF GGD A +++TTVESVNDGK AAW IH +Q L + LP F
Sbjct: 60 RVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFY 116
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISVE+CG++F NPFGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTN
Sbjct: 117 TDIDAVDISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTN 176
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS + YGP+QG FLNIELISEK A
Sbjct: 177 VSPRIVRGTTSGYKYGPQQGCFLNIELISEKRA 209
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 446 FGEYKKIRENLITELNLKK--LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503
FG Y++ R+ + EL +K L+ D ++ P N +KDVIG A+ ++
Sbjct: 471 FGPYQRQRDIKMAELRSQKGALSWDAEQVKATPPAS--NGAPNPAPRIKDVIGAALDKIG 528
Query: 504 NYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCL 563
+Y +LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+
Sbjct: 529 SYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCV 588
Query: 564 SI 565
S+
Sbjct: 589 SV 590
>gi|340386246|ref|XP_003391619.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like, partial
[Amphimedon queenslandica]
Length = 353
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 184/235 (78%), Gaps = 2/235 (0%)
Query: 588 KAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNIT 647
+AGADALELNLSCPHGMGERGMGLACGQDPE+V I WVR +VKIPFF K+TPN+T+I
Sbjct: 1 EAGADALELNLSCPHGMGERGMGLACGQDPELVTEICRWVREAVKIPFFAKMTPNVTDIV 60
Query: 648 DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAV 707
DIA+A+ +G A GV+AINTVSGLM + A+G PWPAVG + TTYGGVSGNA RP+ L+ V
Sbjct: 61 DIARASQKGGATGVTAINTVSGLMGVKANGIPWPAVGNENRTTYGGVSGNAIRPIALRDV 120
Query: 708 SSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
S+IA+ P FPIL GGIDSA+ LQF+ GA +Q+CSA+ NQ++T++DDY+TGL+ LL
Sbjct: 121 SAIARALPGFPILAAGGIDSAEAGLQFLHCGATLLQVCSAIHNQEYTLIDDYVTGLKALL 180
Query: 768 YLKS-TQLKGWDGQSPPTPVHQKGKPAY-QFRDKEGKAIPNFGEYKKIRENLITE 820
YL+S ++L WDGQ PPT HQKGK + + GK++P FG Y K ++ LI++
Sbjct: 181 YLQSVSELGDWDGQCPPTAKHQKGKVITPKITEIIGKSLPEFGPYLKEKDQLISD 235
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 3/134 (2%)
Query: 432 TAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSV 491
T I + +++P FG Y K ++ LI++ S + P + + PV +V
Sbjct: 208 TPKITEIIGKSLPEFGPYLKEKDQLISDYKKSITPLTEFSPETHRPSYKPSKPVP---AV 264
Query: 492 KDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH 551
KDVIG+ + + + ELD K+Q VALI++DMCINCGKCYM CNDSGYQAITF +TH H
Sbjct: 265 KDVIGRVLPMIGAWGELDTKQQAVALIDEDMCINCGKCYMVCNDSGYQAITFDKDTHLPH 324
Query: 552 VTDECTGCTLCLSI 565
+T++CTGCTLC+S+
Sbjct: 325 ITEDCTGCTLCVSV 338
>gi|344243267|gb|EGV99370.1| Dihydropyrimidine dehydrogenase [NADP+] [Cricetulus griseus]
Length = 519
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/284 (55%), Positives = 195/284 (68%), Gaps = 39/284 (13%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLST +T+ L+++GY A FIGIG
Sbjct: 217 SSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSTDGMTLSTLKENGYQAAFIGIG--- 273
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+C C LP ++G VIVLGAGDTAF
Sbjct: 274 ---------------------------------MCA-CHS-PLPSIRGAVIVLGAGDTAF 298
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP V VKD KI
Sbjct: 299 DCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRNVIVKDGKIVA 358
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G WVEDEEQ ++LKA+ +ISAFGS L D V+EA+ P+K +++G PEV+
Sbjct: 359 MQFVRTEQDETGNWVEDEEQMVRLKADVVISAFGSVLSDPKVMEALSPIKFNRWGLPEVD 418
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
TM TS P VF +++TTVESVNDGK A+W+IHKYIQ+
Sbjct: 419 PETMQTSEPWVF-DXXXXGMANTTVESVNDGKQASWYIHKYIQD 461
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 395 KDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
+D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 460 QDIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 498
>gi|154425763|gb|AAI51490.1| DPYD protein [Bos taurus]
Length = 452
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 170/219 (77%), Gaps = 2/219 (0%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP D VNFE+EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPHDVVNFEIELMKDLGVKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IFQGLT++ GFYTSK FLP VA SSK G+C C L I +GTVIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCA-CHSPLLSI-RGTVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I
Sbjct: 346 DCATSALRCGARRVFIVFRKGFVNIRAVPEEVELAREEKCEFLPFLSPRKVIVKGGRIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 259
MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D
Sbjct: 406 MQFVRTEQDETGKWNEDEDQIVCLKADVVISAFGSVLSD 444
>gi|403358016|gb|EJY78643.1| Dihydroorotate dehydrogenase family protein [Oxytricha trifallax]
Length = 1033
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/408 (43%), Positives = 237/408 (58%), Gaps = 33/408 (8%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+ EIPQ R P D +EVE+VK LGVKI + L +D T+E LR+ G+ A+F+GIG +
Sbjct: 261 AQEIPQNRAPIDEALWEVEMVKQLGVKIHYGKKLG-KDFTLEDLRQQGFEAVFLGIGLQD 319
Query: 101 ANV---IPIFQGLTEE----MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVL 153
+N+ P G ++ FYTSK FL V K + + P LKG V+VL
Sbjct: 320 SNMGKNDPTLHGSIQKAQNATNFYTSKKFLKNVMKDVKMHD----ENNNAPRLKGHVLVL 375
Query: 154 GAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDV 213
G GDTA DCA SA R GA +V V FR+G +IRA E + E FLP+ +P++ +
Sbjct: 376 GIGDTALDCARSAFRRGAERVTVAFRRGFQDIRANDEIFEPGRYEGINFLPYSAPLEY-I 434
Query: 214 KDNK--IAGMQFNR---TEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP 268
DNK I ++F++ + + K Q+ ++ + +I +FG L D D + IK
Sbjct: 435 LDNKGEIKAVEFDKNLPSNTDPKNLKYNKTNQKFQMPVDTVIQSFGCVLPDEDWVHKIK- 493
Query: 269 VKLDKYGYPEVNY---TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
K D +N+ T + +F GGD + V++VNDGKTA+W IHK IQE
Sbjct: 494 -KYDNL----INHDHETGRTKAYDWLFVGGDAVG-TKNLVDAVNDGKTASWFIHKQIQES 547
Query: 326 NNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGF 385
N +VP P LP F + ID VDIS E+ GLK NPFGLASAPPTT+ M+RRAFE G+ F
Sbjct: 548 NGFSVPAVPRLPGFHTAIDQVDISTEVVGLKMSNPFGLASAPPTTSYPMIRRAFEVGFDF 607
Query: 386 AVTKTFSLQKDMVTNVSPRIVK-GTTSRHLYGPEQGSFLNIELISEKT 432
AV KTFSL+KD V+NVSPRI K G L + SF NIELI+EKT
Sbjct: 608 AVVKTFSLEKDAVSNVSPRIYKVGADPLKL----EPSFGNIELITEKT 651
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I SIM +Y++ DW+EL+K AG DALELNLSCPHGM E+GMG ACG+DP ++ NI+
Sbjct: 670 MVIGSIMASYSEQDWIELTKLANTAGFDALELNLSCPHGMNEKGMGRACGEDPVILGNIT 729
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WV S+ +P VK+TPN +A+AA A V+ NT+ GL+ G P+ VG
Sbjct: 730 KWVVSNTDLPVIVKITPNYGQAEVLAEAALANGAKAVTLTNTMPGLIDPLPSGEPFLPVG 789
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K + GG +G+ RP L+ + +AKM P+ I G GGI S D A+ F+Q GA A+QI
Sbjct: 790 KAKQYSPGGTTGSVLRPFALRKCADVAKMVPDIEIFGSGGIISGDHAMSFLQYGAKALQI 849
Query: 745 CSAVQNQD-FTVVDDYITGLQTLLYL---KSTQLKGWDGQSPP 783
CSAVQN D TV D T LQ LYL K +GW GQ PP
Sbjct: 850 CSAVQNLDAATVYYDLKTSLQANLYLLQDKERYAQGWRGQYPP 892
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 482 NTPVETILSVKD-----VIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDS 536
N P E + +K ++G + V+ ++ N + +IND+ C+ CG+CY+AC+DS
Sbjct: 900 NKPTENLEVIKTPVIPMIVGSKLHHVSLIEKMSNHEYQAPVINDESCLQCGRCYLACSDS 959
Query: 537 GYQAITFHPE-THQAHVTDECTGCTLCLSI 565
GYQAI F T + ++CTGC +C S+
Sbjct: 960 GYQAIQFDGHGTFPRIIEEDCTGCAICHSV 989
>gi|145500820|ref|XP_001436393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403532|emb|CAK68996.1| unnamed protein product [Paramecium tetraurelia]
Length = 997
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 239/398 (60%), Gaps = 24/398 (6%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIG--KP 99
SEIP R P D +N+E+E VK LG+K + L +D TIE LRK+GY +F+G G +P
Sbjct: 248 SEIPMNRSPVDDINWEIEQVKQLGIKFVFGKELG-KDFTIESLRKEGYECVFLGCGLNEP 306
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159
+ I+Q + SKTFLP+V + K+ E+ P L G VIVLG GDTA
Sbjct: 307 KKGLGHIYQ----QSHILNSKTFLPKVNQAVKQDK----DIEATPKLSGHVIVLGIGDTA 358
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSP---VQVDVKDN 216
DCA SA RCGA +V V+FR+G +IRA E + + E F+P+ P ++VD K
Sbjct: 359 LDCARSAYRCGAQRVSVIFRRGWQDIRANDEILIPSKNEGINFIPYEQPMKLIEVDGKYK 418
Query: 217 KIAGMQFNRTEQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
+I ++ N N+ + + ++IK+ +Y+I+AFGS + + ++ + + K G
Sbjct: 419 EIE-LEQNLPVNNDAFDLKYKLTGEKIKMSFDYLITAFGSEIQNKELDQFLN----QKNG 473
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPC 335
+ +N ++ GGD +++ V++VNDGKT++WHIH ++Q+K+ ++
Sbjct: 474 FVSINDQHQVKGYDWLYAGGDAVGVANL-VDAVNDGKTSSWHIHNFLQKKHQISQLTPDH 532
Query: 336 LPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQK 395
LP + + ID +D+S+ I G+ F NPFGLASAPPTT+ M++RAF+ GWGFAV KTF L K
Sbjct: 533 LPSYTTEIDNIDLSINILGVNFLNPFGLASAPPTTSYPMIKRAFQEGWGFAVVKTFVLDK 592
Query: 396 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
D +TNVSPRI K TT P + NIELISEK+A
Sbjct: 593 DAITNVSPRIYKSTTDPLKQDP---GYANIELISEKSA 627
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+LI SIMC + + DW EL++K + G D LELNLSCPHGM E GMG ACG++P +V++I
Sbjct: 645 VLIGSIMCQHIEQDWRELTRKCKNEGQFDMLELNLSCPHGMTELGMGRACGENPAIVKDI 704
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WV S + IP VK+TPN + DIA+AA EG A V+ NT LM G PWPAV
Sbjct: 705 CQWVTSEIDIPVIVKITPNYPDSADIAQAAKEGGAKAVTLTNTFPTLMDPDPLGTPWPAV 764
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G + TYGG G+ RP+ L+ S +AK P+ I G GGI D AL F++ GA A Q
Sbjct: 765 GEENNVTYGGGCGSMLRPIALRKTSEVAKAIPDIAIFGSGGIIQGDHALSFLRYGASAFQ 824
Query: 744 ICSAVQNQDF-TVVDDYITGLQTLLYLK-STQLKGWDGQSPPTPVHQKGKPAYQF 796
ICSAVQ+QDF TV+ D T Q LY + K W GQ P + QK KP++ F
Sbjct: 825 ICSAVQDQDFATVLYDLKTSFQAHLYASYNLNQKQWKGQFPTS---QKQKPSFAF 876
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+K+++G + + + E+ + +V IN+D C+ CG+CY+ C DSGYQAI F
Sbjct: 882 LKNLVGSGLHHIKDIAEMKRQDFLVPQINEDSCLKCGRCYLTCLDSGYQAIKFDNFNSFP 941
Query: 551 HVTDE-CTGCTLCLSI 565
+ +E CTGC LC ++
Sbjct: 942 TIIEELCTGCALCHAV 957
>gi|328706442|ref|XP_001944849.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Acyrthosiphon pisum]
Length = 1297
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 273/505 (54%), Gaps = 110/505 (21%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLG---VKIECERSLSTR--------DITIEKLRK--D 87
+SEIP+YRLP+ AV +E++ + + G V++E R L + DIT++ + D
Sbjct: 300 ASEIPEYRLPWKAVRWEIDQMVEHGRGGVRLEYGRRLFSSSAEDSKPGDITLKDILDGPD 359
Query: 88 GYTAIFIGIGKPNANV---------IPIFQGLTEEMGFYTSKTFLPRVATSSKK------ 132
G A+F+ IG P + + T+ +G YTSK L + + SK+
Sbjct: 360 GAQAVFVAIGLPEPQLPADLFRDVDVSSTTATTQHLGVYTSKWLLRQASRYSKRLPDNQG 419
Query: 133 ------------GLCGGCKKESLPI---LKG-TVIVLGAGDTAFDCATSALRCGANKVLV 176
G K + P+ +G TV+VLGAGDTA DCAT ALRCGA +V V
Sbjct: 420 GCGGGGCGGSTGDGGCGSKTATTPLPPDFRGKTVLVLGAGDTAMDCATVALRCGARRVRV 479
Query: 177 VFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKD------NKIAGMQFNRTEQNE 230
VFR+G ++RAVPEE++ A E+CE +P PV+ + ++I +QF RT+ ++
Sbjct: 480 VFRRGTPDVRAVPEELEGAMRERCELVPHSQPVRFLFRKLPGGGVDRIRAVQFRRTDVDD 539
Query: 231 ----KGEWVEDEEQRIK----LKANYIISAFGSTLLDNDVLEAIKP-VKLD--------- 272
+G +DE+ L+A+ ++SAFGS L +V A+ P K+D
Sbjct: 540 LEPLQGS-TDDEDHSADDLFVLRADCVVSAFGSRL-PKEVAAALAPYAKVDGRTGRVCVD 597
Query: 273 -KYGYPE---------VNYTTMATSVPGVFCGGDT-------ANLSDTTVESVNDGKTAA 315
+ G E N + P V+CGGD A+ S TTVES NDGKTAA
Sbjct: 598 AQTGRCEWWTDNDNKVANEKQEPRAPPPVWCGGDASCATGSAADPSQTTVESANDGKTAA 657
Query: 316 WHIHKYIQE------KNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPT 369
+HIH+Y+QE +N+ +P LP F + ID VD+SV +CGL+F NPFGLASAPPT
Sbjct: 658 YHIHQYLQELYGYRNQNHQPSVSRPMLPGFRTAIDDVDLSVRMCGLRFMNPFGLASAPPT 717
Query: 370 TASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI-------VKGTTSRHLYGP----- 417
T+++M+RRAF+ GW FAVTKTF L KD+VTNVSPRI V ++ GP
Sbjct: 718 TSAAMIRRAFQAGWAFAVTKTFGLDKDLVTNVSPRIVGLGGHGVGVGSAASGIGPGTLGA 777
Query: 418 -----EQGSFLNIELISEKTAFIFF 437
+ +FLNIELISEKTA +
Sbjct: 778 GDSDVARNAFLNIELISEKTAAYWL 802
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 155/235 (65%), Gaps = 30/235 (12%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC Y ++DW L++ AGADALELNLSCPHGMGE GMGLACGQDP +V NIS
Sbjct: 816 ILIASIMCAYIENDWTSLARLACDAGADALELNLSCPHGMGESGMGLACGQDPVLVENIS 875
Query: 625 LWVR-----------SSVKIPFFVKLTPNITNITDIAKAAYE-GKADGVSAINTVSGLMS 672
WV+ + +P FVK+TPN+T++ +A+AA G ADGV+A+NTVS L
Sbjct: 876 RWVKRVAVRPASDGGTPTAVPVFVKITPNVTDVVAVARAAVRLGGADGVTAVNTVSALGP 935
Query: 673 LSADGN---PWPAVGTKKL----TTYGGVSGNATRPMGLKAVSSIAKMF----------- 714
L GN PWP VG TTYGG+SG A RPMGL+AVS++++
Sbjct: 936 LDVTGNGGRPWPGVGRTTAETPRTTYGGMSGTAVRPMGLRAVSALSRALGPDATAGGDGG 995
Query: 715 PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYL 769
P I+ GG+DSA LQ++ GA VQ+CSAVQNQDFT+V DYITGL+ LLY+
Sbjct: 996 PPVQIMATGGVDSAAATLQYLYCGAKVVQVCSAVQNQDFTIVQDYITGLKALLYM 1050
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Query: 474 NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMAC 533
+GL ++TPVE +G+A++ V Y LD + QVVAL+N+D CINCGKCYMAC
Sbjct: 1146 DGLVPATVSTPVEL------AVGRALKAVGAYKSLDRRAQVVALVNEDSCINCGKCYMAC 1199
Query: 534 NDSGYQAITFHPETHQAHVT-DECTGCTLCLSI 565
NDSGYQAIT P++H HV D CTGCTLCL++
Sbjct: 1200 NDSGYQAITMDPKSHAVHVQPDSCTGCTLCLTV 1232
>gi|118377270|ref|XP_001021815.1| Dihydroorotate dehydrogenase family protein [Tetrahymena
thermophila]
gi|89303582|gb|EAS01570.1| Dihydroorotate dehydrogenase family protein [Tetrahymena
thermophila SB210]
Length = 1080
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/413 (40%), Positives = 244/413 (59%), Gaps = 38/413 (9%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIG--K 98
S+EIPQ R P + +EVE+V+ LGVKI ++L RD ++E L+ G+ ++F+GIG
Sbjct: 307 SNEIPQNRAPIEEALWEVEMVEQLGVKIHYNKALG-RDFSLEDLKSQGFESVFLGIGLSD 365
Query: 99 PNANVIPIFQGLTEEMG-----------FYTSKTFLPRVATSSKKGLCGGCKKESL---P 144
PN V +G ++E F+ SK FL +V ++ KKG G ++E L P
Sbjct: 366 PNTGV----KGTSKEFALSAERARQASNFHYSKHFLTQVGSAIKKG---GNQQEELIDAP 418
Query: 145 ILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLP 204
L G V+VLG GDTA DCA SA R GA +V V FR+G ++RA E + A E F+
Sbjct: 419 KLDGHVVVLGIGDTALDCARSAFRLGAKRVTVAFRRGFQDLRANDEIFEPARYEGINFVA 478
Query: 205 FMSPVQVDVKDN-KIAGMQFNRT-EQNEKGEWVE--DEEQRIKLKANYIISAFGSTLLDN 260
+ SP++ + N +I ++F++ QN + ++ + Q L ++++ +FG L D
Sbjct: 479 YASPLEYEFDSNGQIKAVKFDKNLPQNNDNDNLKYKNTNQIFSLPCDHVVQSFGCVLPDE 538
Query: 261 DVLEAIKPVKLDKYGYPEVNYTTMAT-SVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319
++ +K K D ++N T T + +F GGD + V++VNDGKTA+W++H
Sbjct: 539 QWVQKLK--KSDTL--LDINTDTQQTKAYEWMFVGGDAVG-TKNLVDAVNDGKTASWYMH 593
Query: 320 KYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAF 379
KYIQEK+ VP+ P LP F + ID VDIS EICG+K NPFGLASAPPTT+ M+ R+F
Sbjct: 594 KYIQEKHGQKVPETPELPGFYTEIDDVDISTEICGVKMENPFGLASAPPTTSYPMIARSF 653
Query: 380 ENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
+ G+ FAV KT L KD V NVSPRI K ++ S+ NIEL+SEK+
Sbjct: 654 DIGYDFAVVKTAVLDKDTVFNVSPRIFKVPDPLR----QECSYGNIELVSEKS 702
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LI S+M YN+ DW+++ + + A D +ELNLSCPHGM E+GMG ACG+DP++VR+I+
Sbjct: 721 VLIGSLMAAYNQQDWIDIMHQVKDAPFDMIELNLSCPHGMNEKGMGRACGEDPDIVRDIT 780
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WV S KIP VK+TPN +AKAAYEG A V+ NT+ GL+ DG + VG
Sbjct: 781 SWVTSQTKIPIIVKITPNYGQAEILAKAAYEGGAKAVTLTNTMPGLVDPYPDGESFNGVG 840
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K GG +G+ RP ++ +AK P I GGI S D + ++ GA A+QI
Sbjct: 841 VEKNVAPGGSTGSILRPFAMRKCVDVAKFVPEIDIFASGGIISGDHGINYLHYGAKALQI 900
Query: 745 CSAVQNQD-FTVVDDYITGLQTLLYLKSTQ-LK--GWDGQSPP 783
CSAVQN D TV D T LQ +Y S+Q LK GW GQ PP
Sbjct: 901 CSAVQNLDAATVFYDLKTSLQANMYANSSQKLKKNGWKGQYPP 943
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 481 INTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQA 540
+ TP + + + +++G + +V+ ++ + V I+ D C+ CG+CY+AC+DSGYQA
Sbjct: 955 VETP-QKVPKILEIVGAKLAKVSPIEKMSKEIIQVPEISKDSCLECGRCYVACSDSGYQA 1013
Query: 541 ITFHPETHQAHVTDE-CTGCTLCLS 564
I F + + +E CTGC +C++
Sbjct: 1014 IQFDGYNNVPRIIEEDCTGCAICVA 1038
>gi|340500564|gb|EGR27432.1| hypothetical protein IMG5_196150 [Ichthyophthirius multifiliis]
Length = 1020
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 239/410 (58%), Gaps = 33/410 (8%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIG--K 98
S+EIPQ R P + +E+++V+ LGVK ++L +D ++E LR G+ IF+GIG +
Sbjct: 248 SNEIPQNRAPIEEALWEIQMVEQLGVKFHYNKALG-KDFSLEDLRNQGFETIFLGIGLTE 306
Query: 99 PNANVIPIFQGLTEEMG-----------FYTSKTFLPRVATSSKKGLCGGCKKESLPILK 147
PN +G ++E F+ SK FL +V K+ LP +
Sbjct: 307 PNTGT----KGASKEFALSAERARQANNFHYSKHFLLKVGEVIKQTKPKAVI--DLPKMD 360
Query: 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMS 207
G V+VLG GDTA DCA SA R GA +V VVFR+G ++RA E + +E F+ + S
Sbjct: 361 GHVVVLGIGDTALDCARSAFRLGAKRVTVVFRRGFQDMRANDEIFEPGRQEGINFVAYSS 420
Query: 208 PVQVDVKDN-KIAGMQFNR-TEQNEKGEWVE--DEEQRIKLKANYIISAFGSTLLDNDVL 263
P++ + + + ++F++ QN + ++ +Q L ++I+ +FG L D D +
Sbjct: 421 PLEYEFNEKGNVKAVKFDKYLPQNNDPDNLKYKQTDQNYSLPCDHIVQSFGCQLPDQDWV 480
Query: 264 EAIKPVKLDKYGYPEVNYTTMAT-SVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+ IK K D +V+Y+T T + +F GGD + V++VNDGKTA+W +HKYI
Sbjct: 481 KKIK--KSD--SLIDVDYSTNKTKAYDWLFVGGDAIG-TKNLVDAVNDGKTASWFMHKYI 535
Query: 323 QEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENG 382
QEK VP +P LP F + IDLVDIS E+CG+K NPFGLASAPPTT+ M+ R+F+ G
Sbjct: 536 QEKAGYQVPTEPILPGFYTEIDLVDISTEVCGVKMNNPFGLASAPPTTSYPMISRSFDIG 595
Query: 383 WGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
+ FAV KT L KD V+N+SPRI K T+ P SF NIEL+SEK+
Sbjct: 596 YDFAVIKTLVLDKDTVSNISPRIYKLTSDPLKLEP---SFGNIELVSEKS 642
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI S+M N+ DW ++ +KT++A D +ELNLSCPHGM E+GMG ACG+DP++VR I+
Sbjct: 661 ILIGSLMAGNNEQDWYDIVEKTKEAPFDMIELNLSCPHGMNEKGMGRACGEDPDVVRQIT 720
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WV S K+P +K+TPN +A+AAYEG A V+ NT+ GL+ DG VG
Sbjct: 721 KWVTSKTKVPIIIKITPNYGQAELLAQAAYEGGAKAVTLTNTMPGLIDPYPDGEFSNGVG 780
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
KK T GG +G+ RP L+ +AK P I G GGI S D AL +IQ GA A+QI
Sbjct: 781 VKKQVTPGGSTGSILRPFALRKCVDVAKYVPQIEIFGSGGIISGDHALSYIQYGAKALQI 840
Query: 745 CSAVQNQD-FTVVDDYITGLQTLLYL---KSTQLKGWDGQSPP 783
CSAVQN D TV D T LQ LYL + + KGW GQ PP
Sbjct: 841 CSAVQNLDAATVFYDLKTSLQANLYLLGDEKARQKGWKGQYPP 883
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 515 VALINDDMCINCGKCYMACNDSGYQAITFHP-ETHQAHVTDECTGCTLCLS 564
V IN D C+ CG+CY++C DSGYQAI F T + D+CTGC +C+S
Sbjct: 928 VPEINKDHCLECGRCYVSCTDSGYQAIQFDGFNTIPRIIEDDCTGCAVCVS 978
>gi|380803553|gb|AFE73652.1| dihydropyrimidine dehydrogenase [NADP+] isoform 1, partial [Macaca
mulatta]
Length = 191
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/191 (62%), Positives = 147/191 (76%)
Query: 205 FMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLE 264
F+SP +V VK +IAGMQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D V E
Sbjct: 1 FLSPRKVIVKGGRIAGMQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKE 60
Query: 265 AIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
A+ P+K +++G PEV+ TM TS P VF GGD L++TTVESVNDGK A+W+IHKYIQ
Sbjct: 61 ALSPIKFNRWGLPEVDPETMQTSEPWVFAGGDVIGLANTTVESVNDGKQASWYIHKYIQS 120
Query: 325 KNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWG 384
+ ++ KP LP F + IDLVDISVE+ GLKF NPFGLASA P T++SM+RRAFE GWG
Sbjct: 121 QYGASISAKPELPLFYTPIDLVDISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWG 180
Query: 385 FAVTKTFSLQK 395
FA+TKTFSL K
Sbjct: 181 FALTKTFSLDK 191
>gi|449689599|ref|XP_004212081.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like, partial
[Hydra magnipapillata]
Length = 364
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/190 (64%), Positives = 146/190 (76%), Gaps = 3/190 (1%)
Query: 40 DSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTR-DITIEKLRKDGYTAIFIGIGK 98
SSEIPQYRLP+D VNFE+E ++DLG+KIE + LS +TI L+ DGY AIF+GIG
Sbjct: 177 SSSEIPQYRLPYDVVNFEIEQMEDLGIKIEHGKCLSKNAGLTIRSLQNDGYKAIFVGIGL 236
Query: 99 PNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDT 158
P +IP F+GLT + GFY+SK FLP V+ +SK G+C CK E LP L G VIVLGAGDT
Sbjct: 237 PEPKIIPEFEGLTVKNGFYSSKHFLPLVSKASKPGMCS-CKSE-LPQLHGNVIVLGAGDT 294
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
AFDC TSA+RCGA +V VVFRKG TNIRAVPEE++LA +EKCEFLPFMSP QV +K + I
Sbjct: 295 AFDCCTSAIRCGARRVYVVFRKGFTNIRAVPEEMELARKEKCEFLPFMSPKQVILKGDHI 354
Query: 219 AGMQFNRTEQ 228
M+F RTEQ
Sbjct: 355 TAMEFYRTEQ 364
>gi|380805511|gb|AFE74631.1| dihydropyrimidine dehydrogenase [NADP+] isoform 1, partial [Macaca
mulatta]
Length = 191
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 114/130 (87%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 62 NIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 121
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L +DG PWPAV
Sbjct: 122 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAV 181
Query: 684 GTKKLTTYGG 693
G K TTYGG
Sbjct: 182 GIAKRTTYGG 191
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 389 KTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
KTFSL KD+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA
Sbjct: 1 KTFSLDKDIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTA 45
>gi|183179798|gb|ACC44166.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179800|gb|ACC44167.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179826|gb|ACC44180.1| Cre-C25F6.3 [Caenorhabditis remanei]
Length = 217
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 133/187 (71%), Gaps = 8/187 (4%)
Query: 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701
NIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G K TTYGG+SG+A RP
Sbjct: 1 NITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGGAKRTTYGGMSGSAIRP 60
Query: 702 MGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYIT 761
+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+CSAVQNQDFTVV+DY T
Sbjct: 61 IAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQVCSAVQNQDFTVVEDYCT 120
Query: 762 GLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENL--- 817
GL+ LLYL + LK WDGQSPP P HQKGKP + K +P FG+++ RE L
Sbjct: 121 GLKALLYLSGAESLKDWDGQSPPIPKHQKGKPILV---QGQKNLPFFGKFRDEREKLESI 177
Query: 818 -ITELNL 823
++E NL
Sbjct: 178 KLSETNL 184
>gi|183179796|gb|ACC44165.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179802|gb|ACC44168.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179806|gb|ACC44170.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179808|gb|ACC44171.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179810|gb|ACC44172.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179812|gb|ACC44173.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179814|gb|ACC44174.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179816|gb|ACC44175.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179818|gb|ACC44176.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179820|gb|ACC44177.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179822|gb|ACC44178.1| Cre-C25F6.3 [Caenorhabditis remanei]
gi|183179824|gb|ACC44179.1| Cre-C25F6.3 [Caenorhabditis remanei]
Length = 224
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 133/187 (71%), Gaps = 8/187 (4%)
Query: 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701
NIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G K TTYGG+SG+A RP
Sbjct: 1 NITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGGAKRTTYGGMSGSAIRP 60
Query: 702 MGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYIT 761
+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+CSAVQNQDFTVV+DY T
Sbjct: 61 IAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQVCSAVQNQDFTVVEDYCT 120
Query: 762 GLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENL--- 817
GL+ LLYL + LK WDGQSPP P HQKGKP + K +P FG+++ RE L
Sbjct: 121 GLKALLYLSGAESLKDWDGQSPPIPKHQKGKPILV---QGQKNLPFFGKFRDEREKLESI 177
Query: 818 -ITELNL 823
++E NL
Sbjct: 178 KLSETNL 184
>gi|380806295|gb|AFE75023.1| dihydropyrimidine dehydrogenase [NADP+] isoform 1, partial [Macaca
mulatta]
Length = 220
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 122/159 (76%), Gaps = 2/159 (1%)
Query: 40 DSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKP 99
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P
Sbjct: 64 STSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLP 123
Query: 100 NANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159
N +FQGLT + GFYTSK FLP VA SK G+C C LP ++G VIVLGAGDTA
Sbjct: 124 EPNKDAMFQGLTRDQGFYTSKDFLPLVAKGSKAGMC-AC-HSPLPSIRGVVIVLGAGDTA 181
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEE 198
FDCATSALRCGA +V +VFRKG NIRAVPEE++LA EE
Sbjct: 182 FDCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEE 220
>gi|183179804|gb|ACC44169.1| Cre-C25F6.3 [Caenorhabditis remanei]
Length = 216
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 126/179 (70%), Gaps = 8/179 (4%)
Query: 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709
A+AA +G A GV+A NTVS LM + ADGN WPA+G K TTYGG+SG+A RP+ +KAVSS
Sbjct: 1 ARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGGAKRTTYGGMSGSAIRPIAMKAVSS 60
Query: 710 IAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYL 769
IA FPI+ GGI+SA+ L F+ AGA +Q+CSAVQNQDFTVV+DY TGL+ LLYL
Sbjct: 61 IANELDGFPIMATGGIESAETGLGFLMAGASVLQVCSAVQNQDFTVVEDYCTGLKALLYL 120
Query: 770 KSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENL----ITELNL 823
+ LK WDGQSPP P HQKGKP + K +P FG+++ RE L ++E NL
Sbjct: 121 SGAESLKDWDGQSPPIPKHQKGKPILV---QGQKNLPFFGKFRDEREKLESIKLSETNL 176
>gi|440298597|gb|ELP91228.1| dihydropyrimidine dehydrogenase, putative, partial [Entamoeba
invadens IP1]
Length = 729
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 158/276 (57%), Gaps = 20/276 (7%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP---HGM-GERG-----------M 609
I+IASIMC NK+DW L+K TE+AGADALELN SCP HG G+ G M
Sbjct: 364 IVIASIMCMDNKEDWQSLAKMTEEAGADALELNFSCPNECHGNDGKEGGCTGGFKSHNAM 423
Query: 610 GLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSG 669
+A G P + + +V +VKIP + KLTPN+ NI ++A AA G A GVS INTV G
Sbjct: 424 AMAIGVSPSAIERCTRYVVDAVKIPVYPKLTPNVQNIEELAAAAMRGGATGVSTINTVFG 483
Query: 670 LMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDS 727
+ ++ G+PWP VG + T GG+SG+ RP+ ++ ++ + + N +LGIGG+ S
Sbjct: 484 ISEITMSGHPWPQVGVNQNTISGGLSGDMVRPIAIRQIAQVLRHNENIRGHLLGIGGVRS 543
Query: 728 ADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGW-DGQSPPTP 785
A A+Q I GA +Q+CS++Q + +VD+ I+G + LLY S L+G+ + Q
Sbjct: 544 AQTAMQLIYTGASVIQMCSSIQKWSYDIVDEIISGTKFLLYCWSRPDLRGYLNSQGVERF 603
Query: 786 VHQKGKPAYQFRD-KEGKAIPNFGEYKKIRENLITE 820
+ Q K Y D K+ + +P E I I E
Sbjct: 604 MPQGEKTMYWKLDCKQDRKVPTVAEVTGIALKHIGE 639
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 182/409 (44%), Gaps = 66/409 (16%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDL-GVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S + + RL ++ ++FE+ LV V+++ + + DI LRK Y +F+ G+ +
Sbjct: 15 SSMKETRL-WENLDFEISLVTAYPNVEVKVNADVKSEDIN--NLRKQ-YNYVFVCCGRQS 70
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ K L R G + + TV +LG+GD
Sbjct: 71 P--------------YTFDKAPLAR-------EFLNGMADGTFDVKGKTVAILGSGDVTV 109
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCA +A GA +VL+V R+ +++ E E +P + P ++D K +
Sbjct: 110 DCALAAQDHGAKQVLMVMREDIRTATCHKKQMIEVIERNIEIIPKVLPQRLDAKG--VIC 167
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
Q+E+ + A+ +I AFG L++N V L G
Sbjct: 168 KDLYDPNQSER-----------LIPADLVICAFGFGLVNNFVEGTADEKGLVSKG----- 211
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
++ GGD S + VE+V+D + I ++E + + +PKF
Sbjct: 212 ----KDGEADLYIGGDFRR-SFSIVEAVHDAEVVVAEI---LKENDGVKR-----IPKFH 258
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ++ VDISV G+K+ NPFG++SAP + ++R FE G+GFA+TKT+ L+KD+ N
Sbjct: 259 TPVEDVDISVVCDGIKYENPFGISSAPVSGTYDHLKRCFEAGFGFALTKTYPLEKDIQKN 318
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFF----FLFQAIPN 445
RIVK S+ E S+ NI +ISE + + L Q PN
Sbjct: 319 NHIRIVKVYDSQ-----ESTSYNNIVMISEHSHHYWLDSIKKLKQEFPN 362
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 490 SVKDVIGQAVQRVTNYTELD--NKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+V +V G A++ + L+ K +V A I ++ CI CG C ++C D+ AI +
Sbjct: 625 TVAEVTGIALKHIGERKILEGPEKWRVCAHIEEN-CIGCGSCALSCRDNSTTAIK---KN 680
Query: 548 HQAHVTDE--CTGCTLCLSI 565
Q ++ DE C GC+LC S+
Sbjct: 681 GQKYIVDEEKCIGCSLCASV 700
>gi|183231113|ref|XP_656317.2| dihydropyrimidine dehydrogenase [Entamoeba histolytica HM-1:IMSS]
gi|169802613|gb|EAL50934.2| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710343|gb|EMD49439.1| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica
KU27]
Length = 901
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 155/277 (55%), Gaps = 22/277 (7%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP---HG------------MGERGM 609
++IASIMC N DDW L+K +E+AGADALELN SCP HG M
Sbjct: 536 VVIASIMCMDNADDWHLLAKLSEEAGADALELNFSCPNECHGNDGNEGGCEGGFKSHNAM 595
Query: 610 GLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSG 669
+A G P + + +V SV IP + KLTPN+ NI ++A AA G A GVS INTV G
Sbjct: 596 AMAIGVSPAAIERCTRYVVESVHIPVYPKLTPNVGNIEELAAAAMRGGASGVSTINTVFG 655
Query: 670 LMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDS 727
+ ++ G+PWP VG ++ T GG+SG+ RP+ ++ ++ + + N +LGIGG+ S
Sbjct: 656 ISEITLSGHPWPQVGVERNTISGGLSGDLVRPIAIRQIAQVLRHNENVRGHLLGIGGVRS 715
Query: 728 ADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGW---DGQSPP 783
A+ A+Q I GA VQ+CS+VQ + +VD+ I+G + +LY S L+G+ G
Sbjct: 716 AETAMQLIYTGASVVQMCSSVQKWSYDIVDEIISGTKFILYCWSRPDLRGYLNSQGVESF 775
Query: 784 TPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITE 820
P +K P + +K+ K +P E I I E
Sbjct: 776 MPYGEK-TPFWTLDNKQDKPVPKLAEVTGIALKHIGE 811
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 181/393 (46%), Gaps = 66/393 (16%)
Query: 43 EIPQYRLPFDAVNFEVELVKDL-GVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
EI + RL + ++FE+E++K ++ + S+S DI LRK Y +F+G G+
Sbjct: 188 EIQEQRLAKEELDFEIEMIKSYPNIEFKLNSSVSASDIA--GLRKQ-YDYVFVGCGRQK- 243
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
P G ++ FL G ++ + TV +LG+GD A D
Sbjct: 244 ---PYTFGDAP-----LARDFLY------------GMSDNTIDVKGKTVAILGSGDVAVD 283
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
C +A GA++VL+V R+ + + E E +P + P ++D K
Sbjct: 284 CCEAAQEHGASQVLLVMREDIKTATCHKKSMIGVIERNIEIIPKVLPQRLDAKGVIC--- 340
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
K + + +R+ + A+ +I AFG D +E G P+ N
Sbjct: 341 ---------KDLYDPNGIERL-IPADIVICAFGFGP-DASFVE----------GTPDANG 379
Query: 282 TTMATS--VPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
M + V+ GGD S + VE+V+D + I K +PKF
Sbjct: 380 LVMKAENGLGAVYVGGDYRR-SFSIVEAVHDAEVVVASIAKEFGVNK---------IPKF 429
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ +D VDISV + G+K+ NPFG++SAP + ++R F+ G+GFA+TKT+ L+KD+
Sbjct: 430 HTPVDDVDISVTVDGIKYENPFGISSAPVSGTYDHLKRCFQAGFGFALTKTYPLEKDIQK 489
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
N RIVK S+ E S+ NI +ISE +
Sbjct: 490 NNHIRIVKVYDSQ-----ESTSYNNIVMISEHS 517
>gi|407040682|gb|EKE40265.1| dihydropyrimidine dehydrogenase, putative [Entamoeba nuttalli P19]
Length = 901
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 155/277 (55%), Gaps = 22/277 (7%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP---HG------------MGERGM 609
++IASIMC N DDW L+K +E+AGADALELN SCP HG M
Sbjct: 536 VVIASIMCMDNADDWHLLAKLSEEAGADALELNFSCPNECHGNDGNEGGCEGGFKSHNAM 595
Query: 610 GLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSG 669
+A G P + + +V SV IP + KLTPN+ NI ++A AA G A GVS INTV G
Sbjct: 596 AMAIGVSPAAIERCTRYVVESVHIPVYPKLTPNVGNIEELAAAAMRGGASGVSTINTVFG 655
Query: 670 LMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDS 727
+ ++ G+PWP VG ++ T GG+SG+ RP+ ++ ++ + + N +LGIGG+ S
Sbjct: 656 ISEITLSGHPWPQVGVERNTISGGLSGDLVRPIAIRQIAQVLRHNENVRGHLLGIGGVRS 715
Query: 728 ADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGW---DGQSPP 783
A+ A+Q I GA VQ+CS+VQ + +VD+ I+G + +LY S L+G+ G
Sbjct: 716 AETAMQLIYTGASVVQMCSSVQKWSYDIVDEIISGTKFILYCWSRPDLRGYLNSQGVESF 775
Query: 784 TPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITE 820
P +K P + +K+ K +P E I I E
Sbjct: 776 MPYGEK-TPFWTLDNKQDKPVPKLAEVTGIALKHIGE 811
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 181/393 (46%), Gaps = 66/393 (16%)
Query: 43 EIPQYRLPFDAVNFEVELVKDL-GVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
EI + RL + ++FE+E++K ++ + S+S DI LRK Y +F+G G+
Sbjct: 188 EIQEQRLAKEELDFEIEMIKSYPNIEFKLNSSVSASDIA--GLRKQ-YDYVFVGCGRQK- 243
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
P G ++ FL G ++ + TV +LG+GD A D
Sbjct: 244 ---PYTFGDAP-----LARDFLY------------GMSDNTIDVKGKTVAILGSGDVAVD 283
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
C +A GA++VL+V R+ + + E E +P + P ++D K
Sbjct: 284 CCEAAQEHGASQVLLVMREDIKTATCHKKSMIGVIERNIEIIPKVLPQRLDAKGVIC--- 340
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
K + + +R+ + A+ +I AFG D +E G P+ N
Sbjct: 341 ---------KDLYDPNGIERL-IPADIVICAFGFGP-DASFVE----------GTPDANG 379
Query: 282 TTMATS--VPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
M + V+ GGD S + VE+V+D + I K +PKF
Sbjct: 380 LVMKAENGLGAVYVGGDYRR-SFSIVEAVHDAEVVVASIAKEFGVNK---------IPKF 429
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ +D VDISV + G+K+ NPFG++SAP + ++R F+ G+GFA+TKT+ L+KD+
Sbjct: 430 HTPVDDVDISVTVDGIKYENPFGISSAPVSGTYEHLKRCFQAGFGFALTKTYPLEKDIQK 489
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
N RIVK S+ E S+ NI +ISE +
Sbjct: 490 NNHIRIVKVYDSQ-----ESTSYNNIVMISEHS 517
>gi|167386568|ref|XP_001737815.1| dihydropyrimidine dehydrogenase [Entamoeba dispar SAW760]
gi|165899267|gb|EDR25906.1| dihydropyrimidine dehydrogenase, putative [Entamoeba dispar SAW760]
Length = 901
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 155/277 (55%), Gaps = 22/277 (7%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP---HG------------MGERGM 609
++IASIMC N DDW L+K +E+AGADALELN SCP HG M
Sbjct: 536 VVIASIMCMDNADDWHLLAKLSEEAGADALELNFSCPNECHGNDGNEGGCEGGFKSHNAM 595
Query: 610 GLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSG 669
+A G P + + +V SV IP + KLTPN+ NI ++A AA G A GVS INTV G
Sbjct: 596 AMAIGVSPAAIERCTRYVVESVHIPVYPKLTPNVGNIEELAAAAMRGGASGVSTINTVFG 655
Query: 670 LMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDS 727
+ ++ G+PWP VG ++ T GG+SG+ RP+ ++ ++ + + N +LGIGG+ S
Sbjct: 656 ISEITLSGHPWPQVGVERNTISGGLSGDLVRPIAIRQIAQVLRHNENVRGHLLGIGGVRS 715
Query: 728 ADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGW---DGQSPP 783
A+ A+Q I GA VQ+CS+VQ + +VD+ I+G + +LY S L+G+ G
Sbjct: 716 AETAMQLIYTGASVVQMCSSVQKWSYDIVDEIISGTKFILYCWSRPDLRGYLNSQGVESF 775
Query: 784 TPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITE 820
P +K P + +K+ K +P E I I E
Sbjct: 776 MPYGEK-TPFWTLDNKQDKPVPKLAEVTGIALKHIGE 811
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 186/398 (46%), Gaps = 66/398 (16%)
Query: 43 EIPQYRLPFDAVNFEVELVKDL-GVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
EI + RL + ++FE+E++K ++ + S+S DI LRK Y +F+G G+
Sbjct: 188 EIQEQRLAKEELDFEIEMIKAYPNIEFKLNSSVSASDIA--GLRKQ-YDYVFVGCGRQK- 243
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
P G ++ FL G ++ + TV +LG+GD A D
Sbjct: 244 ---PYTFGDAP-----LARDFLY------------GMSDNTIDVKGKTVAILGSGDVAVD 283
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
C +A GA++VL+V R+ + + E E +P + P ++D K
Sbjct: 284 CCEAAQEHGASQVLLVMREDIKTATCHKKSMIGVIERNIEIIPKVLPQRLDAKGVIC--- 340
Query: 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNY 281
K + + +R+ + A+ +I AFG D +E G P+ N
Sbjct: 341 ---------KDLYDPNGIERL-IPADMVICAFGFGP-DASFVE----------GTPDANG 379
Query: 282 TTMATS--VPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKF 339
M + V+ GGD S + VE+V+D + I K L V DK +PKF
Sbjct: 380 LIMKAENGLGAVYIGGDYRR-SFSIVEAVHDAEVVVASIAK------ELGV-DK--IPKF 429
Query: 340 MSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVT 399
+ +D VDISV + G+K+ NPFG++SAP + ++R F+ G+GFA+TKT+ L+KD+
Sbjct: 430 HTPVDDVDISVTVDGIKYENPFGISSAPVSGTYDHLKRCFQAGFGFALTKTYPLEKDIQK 489
Query: 400 NVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAFIFF 437
N RIVK S+ E S+ NI +ISE + +
Sbjct: 490 NNHIRIVKVYDSQ-----ESTSYNNIVMISEHSHHYWL 522
>gi|123406266|ref|XP_001302760.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|123470791|ref|XP_001318599.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|121884080|gb|EAX89830.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|121901362|gb|EAY06376.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
Length = 811
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 204/396 (51%), Gaps = 53/396 (13%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SE+ RLP + V +EV++ KD GV+ + + L +D T+E L+K GY A+F+ G+P
Sbjct: 97 SELIPTRLPTEDVEWEVQMAKDTGVEFQLGKRLG-KDFTVEDLKKQGYQAVFLAFGRPE- 154
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCK---KESLPILKGT-VIVLGAGD 157
++P F G TSK FL + +CG K E LP G V VLGAGD
Sbjct: 155 EIVPDFPC----EGAITSKDFL--------RQICGVLKLKNGEKLPDFTGKKVCVLGAGD 202
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TA DCA++A R G N V V FRK +RA P E+ E+ EFL + P +D
Sbjct: 203 TAMDCASAASRLGGN-VTVAFRKDFKGMRAHPAELHELLEQGVEFLSLVQPTAID----- 256
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDN-DVLEAIKPVKLDKYGY 276
G R ++N G++ ++ I K + +I AFG+ + + D++ K
Sbjct: 257 -NGTVTFRLQENNNGQY-RGLDEFITRKFDTVILAFGARIGKHADLIPG-------KINV 307
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCL 336
+V+ M +F GGD A S T VE+VND +TAA I Y+ EK + PC
Sbjct: 308 QKVDGQDM------LFVGGDLAQ-SLTVVEAVNDARTAARMIADYLGEKREI-----PC- 354
Query: 337 PKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKD 396
F + +D V + E CG+KF NP G++SAP + +R F+ G G+AVTKT KD
Sbjct: 355 --FETEVDHVSLETEFCGMKFKNPSGISSAPVSGTYECIRNCFKAGMGWAVTKTILPTKD 412
Query: 397 MVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
++ RIVK + GP GSF NI +++E T
Sbjct: 413 VIRENDFRIVKADENP---GP-SGSFCNICMMTEHT 444
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 133/215 (61%), Gaps = 11/215 (5%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP---HGMG--------ERGMGLAC 613
+L+ASI + +K+ W L K AGADALELNLSCP HG G E +G+A
Sbjct: 463 VLVASIATSDSKERWQNLVKNVIAAGADALELNLSCPNEVHGEGGCKGGFDTENKIGMAL 522
Query: 614 GQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSL 673
G P V+ IS +V+ + +PFFVKLTPNIT+ DIA+AA EG ADGV+ INTVSG+
Sbjct: 523 GTHPISVKRISQYVKEATTVPFFVKLTPNITDPIDIAQAALEGGADGVAMINTVSGIAKF 582
Query: 674 SADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQ 733
DG P P VG +K GG+SG+ RP+ L+ +S + FP PILGIGGI S ALQ
Sbjct: 583 WPDGTPLPQVGKEKYVLSGGLSGDQVRPIALRQISRVHNKFPEMPILGIGGIGSGYTALQ 642
Query: 734 FIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLY 768
+ AG+ Q+CSA+Q + +V + GLQ LY
Sbjct: 643 HLYAGSSVFQMCSAIQRYSYDIVREVNAGLQFYLY 677
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 480 QINTPVET-----ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACN 534
Q+ P +T I ++ ++ G +RV D + A I+D C+ CGKC ++C
Sbjct: 700 QVPIPEDTKQDRKIPTLAELRGLGAKRVVQRESFDINWTLHAEIDDATCLQCGKCALSCR 759
Query: 535 DSGYQAITFHPETHQAHVTDECTGCTLCLSILIASIM 571
D+ +AI + + DEC GC LC S+ M
Sbjct: 760 DNSVEAIHLVDGKWKVN-HDECIGCALCHSVCPVQAM 795
>gi|89271291|emb|CAJ82653.1| dihydropyrimidine dehydrogenase [Xenopus (Silurana) tropicalis]
Length = 275
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 680 WPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGA 739
WPAVG TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA
Sbjct: 1 WPAVGRGSRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGA 60
Query: 740 HAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRD 798
+Q+CSAVQNQDFTV++DY TGL+ LLYLKS +L+ WDGQSPPT HQKGKP +
Sbjct: 61 SVLQVCSAVQNQDFTVIEDYCTGLKALLYLKSIDELQDWDGQSPPTIRHQKGKPVPTIAE 120
Query: 799 KEGKAIPNFGEYKKIRENLITELNLKKLNSD 829
+G+ +P+FG Y + R+ ++ E + L +
Sbjct: 121 IKGEKLPSFGPYLEKRKRILAENKINDLTCN 151
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P+FG Y + R+ ++ E + L + + ++ P + I SVKDVIG+A+Q
Sbjct: 124 EKLPSFGPYLEKRKRILAENKINDLTCNTSPVTK---EKTHFVPNKPIPSVKDVIGRALQ 180
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ +Y++L+ ++QVVALI+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 181 YIGSYSQLNIQEQVVALIDEEMCINCGKCYMTCNDSGYQAIEFDPETHLTTVTDSCTGCT 240
Query: 561 LCLSI 565
LCLS+
Sbjct: 241 LCLSV 245
>gi|123492285|ref|XP_001326031.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|121908939|gb|EAY13808.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
Length = 372
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 133/215 (61%), Gaps = 11/215 (5%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP---HGMG--------ERGMGLAC 613
+L+ASI + +K+ W L K AGADALELNLSCP HG G E +G+A
Sbjct: 24 VLVASIATSDSKERWQNLVKDVIAAGADALELNLSCPNEVHGEGGCKGGFDTENKIGMAL 83
Query: 614 GQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSL 673
G P V+ IS +V+ + +PFFVKLTPNIT+ DIA+AA EG ADGV+ INTVSG+
Sbjct: 84 GTHPVSVKRISQYVKEATTVPFFVKLTPNITDPIDIAQAALEGGADGVAMINTVSGIAKF 143
Query: 674 SADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQ 733
DG P P VG +K GG+SG+ RP+ L+ +S + FP PILGIGGI S ALQ
Sbjct: 144 WPDGTPLPQVGKEKYVLSGGLSGDQVRPIALRQISRVHNKFPEMPILGIGGIGSGYTALQ 203
Query: 734 FIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLY 768
+ AG+ Q+CSA+Q + +V + GLQ LY
Sbjct: 204 HLYAGSSVFQMCSAIQRFSYDIVREVNAGLQFYLY 238
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ ++ G + V D + A I+D C+ CGKC ++C D+ +AI +
Sbjct: 276 TLAELRGLGAKYVVQRESFDITWTLHAEIDDATCLQCGKCALSCRDNSVEAIHLIDGKWK 335
Query: 550 AHVTDECTGCTLCLSILIASIM 571
+ DEC GC LC S+ M
Sbjct: 336 VN-HDECIGCALCHSVCPVQAM 356
>gi|134290941|ref|YP_001114710.1| dihydropyrimidine dehydrogenase [Burkholderia vietnamiensis G4]
gi|134134130|gb|ABO58455.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) / dihydroorotate oxidase B,
catalytic subunit [Burkholderia vietnamiensis G4]
Length = 435
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPQTPNLPISGIGGISSWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + K D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLVDGLSNWM---------------------DDKGYATLDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V +C GC LC+ +
Sbjct: 372 HFEVVDAQCVGCNLCMHV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|387905856|ref|YP_006336193.1| Dihydropyrimidine dehydrogenase [Burkholderia sp. KJ006]
gi|387580748|gb|AFJ89462.1| Dihydropyrimidine dehydrogenase [Burkholderia sp. KJ006]
Length = 435
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPQTPNLPISGIGGISSWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + K D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLVDGLSNWM---------------------DDKGYATLDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V +C GC LC+ +
Sbjct: 372 HFEVVDAQCVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|330820854|ref|YP_004349716.1| dihydroorotate dehydrogenase family protein [Burkholderia gladioli
BSR3]
gi|327372849|gb|AEA64204.1| dihydroorotate dehydrogenase family protein [Burkholderia gladioli
BSR3]
Length = 439
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 141/251 (56%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + + E GADA+ELN CPHGM ERGMG A GQ PE V I+
Sbjct: 103 LIVSLMVPCNEQDWKGILPRIEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMITR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AA++G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAWKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPQTPNLPISGIGGISTWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG + D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYATLE--DVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP--ET 547
+++DV G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLEDVRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGQR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 372 HFEVIDAECVGCNLCMHV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCNIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|221215696|ref|ZP_03588657.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD1]
gi|221164398|gb|EED96883.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD1]
Length = 435
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISTWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + K + D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLVDGLSNWMDDKGYAM---------------------LDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--TH 548
+ DV G+AV VT++ L+ + + A I+ D CI CG C++AC D+ +QAIT + H
Sbjct: 313 LDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGVRH 372
Query: 549 QAHVTDECTGCTLCLSI 565
V +C GC LC+ +
Sbjct: 373 FEVVDADCVGCNLCMHV 389
>gi|347751376|ref|YP_004858941.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
36D1]
gi|347583894|gb|AEP00161.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
36D1]
Length = 426
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 6/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E AG D LELN CPHGM ERGMG A GQ P++V +
Sbjct: 101 IIASVMVEPKREKWHEIVKRVEDAGVDGLELNFGCPHGMAERGMGAASGQVPQLVEQQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV-G 684
WV+ + K P VKLTPNIT+IT A AA +G AD VS INT++ LM + D W V
Sbjct: 161 WVKEAAKTPVIVKLTPNITDITATAFAAVQGGADAVSMINTINSLMGVDLD--TWQTVPH 218
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
L T+GG G A +P+ L V+ A+ P+ PI GIGGI + A +F+ GA V
Sbjct: 219 VAGLGTHGGYCGPAVKPIALSMVAECAR-DPDIPVPISGIGGIATWKDAAEFMLMGASNV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+AV + F++V+D I GL L K Q
Sbjct: 278 QVCTAVMHHGFSIVEDMIDGLNHYLDEKGLQ 308
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ +++VEI G++ PNPF LASAPPT + V+RAFE GWG V KT D + NV+ R
Sbjct: 1 MANLNVEITGIRSPNPFWLASAPPTNSGYQVQRAFEAGWGGVVWKTLG---DPILNVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ S G F NIELI+++
Sbjct: 58 FAALSYS----GRRMAGFNNIELITDR 80
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D+IG++V + N+ ELD + VA IN++ CI+C KCY+AC D+ +Q I +T
Sbjct: 309 SASDLIGKSVPKYKNWGELDLNYRTVARINEEHCIHCNKCYIACEDTAHQCIDRLVDTSG 368
Query: 550 AHV----TDECTGCTLC 562
+ ++C GC LC
Sbjct: 369 KSILRVREEDCVGCNLC 385
>gi|421473945|ref|ZP_15922012.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans CF2]
gi|400233183|gb|EJO62756.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans CF2]
Length = 435
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISTWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D I GL + K D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLIDGLSNWM---------------------DDKGYATLDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ + + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIRCGLCHIACEDTSHQAITREKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V +C GC LC+ +
Sbjct: 372 HFEVVDADCVGCNLCMHV 389
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|413964931|ref|ZP_11404157.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. SJ98]
gi|413927605|gb|EKS66894.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. SJ98]
Length = 428
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 140/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNEKDWKWILTQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AA++G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAFKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPQTPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKHL 330
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAI +
Sbjct: 312 TLDDIRGRAVPNVTDWKHLNLKYDIKARIDQDKCIQCGLCHIACEDTSHQAILKEKDGKR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLTCNIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|170696015|ref|ZP_02887153.1| dihydroorotate dehydrogenase family protein [Burkholderia graminis
C4D1M]
gi|170139095|gb|EDT07285.1| dihydroorotate dehydrogenase family protein [Burkholderia graminis
C4D1M]
Length = 442
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 141/254 (55%), Gaps = 26/254 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 MIVSLMVPCNEHDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNIT+I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNITDIRVGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDTETPNLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVTDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKIREN 816
A+PN ++K + N
Sbjct: 320 AVPNVTDWKYLNLN 333
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIKCGLCHIACEDTAHQAITKEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|167590078|ref|ZP_02382466.1| dihydroorotate dehydrogenase family protein [Burkholderia ubonensis
Bu]
Length = 435
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 141/254 (55%), Gaps = 26/254 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPQTPNLPISGIGGISTWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLVDGLSNWM-------------------DEKGYAT--LDDVRGR 319
Query: 803 AIPNFGEYKKIREN 816
A+PN +++ + N
Sbjct: 320 AVPNVTDWQYLNLN 333
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWQYLNLNYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 372 HFEVIDAECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|416934822|ref|ZP_11933866.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. TJI49]
gi|325525301|gb|EGD03152.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. TJI49]
Length = 438
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDHMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISNWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + K D G+
Sbjct: 281 QVCTAAMHYGFRIVSDMVDGLSNWM---------------------DDKGYATLDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ + + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDAECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCSIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|421870172|ref|ZP_16301809.1| Dihydropyrimidine dehydrogenase [NADP+] [Burkholderia cenocepacia
H111]
gi|358070779|emb|CCE52687.1| Dihydropyrimidine dehydrogenase [NADP+] [Burkholderia cenocepacia
H111]
Length = 438
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDHMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + K G D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWMDEKGYATLG---------------------DIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLGDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V C GC LC+ +
Sbjct: 372 HFEVVDSACVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|123492280|ref|XP_001326030.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Trichomonas vaginalis G3]
gi|121908938|gb|EAY13807.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Trichomonas vaginalis G3]
Length = 532
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 187/358 (52%), Gaps = 47/358 (13%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
SE+ RLP + + +EV++ KD GV+ + +SL +D T+E L+K GY A+F+ G+P
Sbjct: 191 SELIPTRLPTEDIEWEVQMAKDTGVEFQLGKSLG-KDFTVEDLKKQGYQAVFLAFGRPE- 248
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCK---KESLPILKGT-VIVLGAGD 157
++P F G TSK FL +V CG K E LP G V VLGAGD
Sbjct: 249 EIVPDFPC----EGALTSKDFLRQV--------CGVLKLKNGEKLPDFTGKKVCVLGAGD 296
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TA DCA++A R G N V V FRK +RA P E+ E+ EFL + P +D
Sbjct: 297 TAMDCASAASRLGGN-VTVAFRKDFKGMRAHPAELHELLEQGVEFLSLVQPTAID----- 350
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
G R ++N G++ ++ I K + +I AFG+ + + L P K++
Sbjct: 351 -NGTITFRLQENNNGQY-RGLDEFITRKFDTVILAFGAKIGKHSEL---IPGKIN---VQ 402
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLP 337
+V+ M +F GGD A S T VE+VND +TAA I Y+ EK + PC
Sbjct: 403 KVDGQDM------LFVGGDLAQ-SLTVVEAVNDARTAARMIADYLGEKREI-----PC-- 448
Query: 338 KFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQK 395
F + +D V + E CG+KF NP G++SAP + +R F+ G G+AVTKT Q+
Sbjct: 449 -FETEVDHVSLETEFCGMKFKNPSGISSAPVSGTYECIRNCFKAGMGWAVTKTILPQR 505
>gi|221202549|ref|ZP_03575578.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2M]
gi|221207748|ref|ZP_03580755.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2]
gi|421470996|ref|ZP_15919327.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
BAA-247]
gi|221172245|gb|EEE04685.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2]
gi|221177586|gb|EEE10004.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2M]
gi|400226517|gb|EJO56591.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
BAA-247]
Length = 435
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISTWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + K D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLVDGLSNWM---------------------DDKGYATLDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ + + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V +C GC LC+ +
Sbjct: 372 HFEVVDADCVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|307729120|ref|YP_003906344.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1003]
gi|307583655|gb|ADN57053.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1003]
Length = 440
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 142/254 (55%), Gaps = 26/254 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ +++P VKLTPNIT+I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGLRLPCLVKLTPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDEQTPNLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVTDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKIREN 816
A+PN ++K + N
Sbjct: 320 AVPNVTDWKYLNLN 333
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ + A I+ D CI CG C++AC D+ +QAIT
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIQCGLCHIACEDTAHQAITKEKAGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 372 HFEVMDSECVGCNLCMHV 389
>gi|161522384|ref|YP_001585313.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189348740|ref|YP_001941936.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|160345937|gb|ABX19021.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans ATCC 17616]
gi|189338878|dbj|BAG47946.1| dihydroorotate oxidase [Burkholderia multivorans ATCC 17616]
Length = 435
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISTWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D + GL + K D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLVDGLSNWM---------------------DDKGYATLDDVRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ + + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V +C GC LC+ +
Sbjct: 372 HFEVVDADCVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|323526708|ref|YP_004228861.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1001]
gi|323383710|gb|ADX55801.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1001]
Length = 442
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 141/254 (55%), Gaps = 26/254 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPNIT+I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGTRLPCLVKLTPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDEQTPNLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKIREN 816
A+PN ++K + N
Sbjct: 320 AVPNVTDWKYLNLN 333
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ + A I+ D CI CG C++AC D+ +QAI +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIQCGLCHIACEDTAHQAIMKEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
>gi|407714154|ref|YP_006834719.1| dihydropyrimidine dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407236338|gb|AFT86537.1| dihydropyrimidine dehydrogenase (NADP+) [Burkholderia
phenoliruptrix BR3459a]
Length = 442
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 141/254 (55%), Gaps = 26/254 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPNIT+I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGTRLPCLVKLTPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDEQTPNLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKIREN 816
A+PN ++K + N
Sbjct: 320 AVPNVTDWKYLNLN 333
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ + A I+ D CI CG C++AC D+ +QAI +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIQCGLCHIACEDTAHQAIMKEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
>gi|91784371|ref|YP_559577.1| dihydropyrimidine dehydrogenase [Burkholderia xenovorans LB400]
gi|91688325|gb|ABE31525.1| dihydropyrimidine dehydrogenase (NADP+) / dihydroorotate oxidase B,
catalytic subunit [Burkholderia xenovorans LB400]
Length = 444
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 140/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDAETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAI +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDKCIQCGLCHIACEDTAHQAIMKEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 372 HFEVMDSECVGCNLCMHV 389
>gi|78059775|ref|YP_366350.1| dihydropyrimidine dehydrogenase [Burkholderia sp. 383]
gi|77964325|gb|ABB05706.1| dihydroorotate oxidase B, catalytic subunit / dihydrouracil
dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase
(NADP+) [Burkholderia sp. 383]
Length = 438
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDHMAPMPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|107023146|ref|YP_621473.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia AU 1054]
gi|116686614|ref|YP_839861.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia HI2424]
gi|105893335|gb|ABF76500.1| dihydroorotate oxidase B, catalytic subunit [Burkholderia
cenocepacia AU 1054]
gi|116652329|gb|ABK12968.1| dihydropyrimidine dehydrogenase (NADP+) [Burkholderia cenocepacia
HI2424]
Length = 437
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGAR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|170735207|ref|YP_001774321.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169821245|gb|ACA95826.1| dihydroorotate dehydrogenase family protein [Burkholderia
cenocepacia MC0-3]
Length = 437
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDSECVGCNLCMHV 389
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 47/93 (50%), Gaps = 17/93 (18%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQ------GSFLNIELISEK 431
YG Q NIELI+++
Sbjct: 60 ----------YGAVQWNDQRIAGLNNIELITDR 82
>gi|197295563|ref|YP_002154104.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia J2315]
gi|444360505|ref|ZP_21161729.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia BC7]
gi|444365815|ref|ZP_21165927.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia
K56-2Valvano]
gi|195945042|emb|CAR57667.1| putative dihydroorotate dehydrogenase family protein [Burkholderia
cenocepacia J2315]
gi|443599944|gb|ELT68183.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia BC7]
gi|443605623|gb|ELT73464.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia
K56-2Valvano]
Length = 438
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V C GC LC+ +
Sbjct: 372 HFEVVDSACVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|377813145|ref|YP_005042394.1| dihydropyrimidine dehydrogenase [Burkholderia sp. YI23]
gi|357937949|gb|AET91507.1| dihydropyrimidine dehydrogenase [Burkholderia sp. YI23]
Length = 428
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 127/205 (61%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + ++ E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNEHDWKWILRQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AA++G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAFKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D GL +
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLTCNIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRMAGLNNIELITDR 82
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--THQAHVT 553
G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAI E H V
Sbjct: 318 GRAVANVTDWKNLNLKYDIKARIDQDKCIKCGLCHIACEDTSHQAILKEKEGKRHFEVVD 377
Query: 554 DECTGCTLCLSI 565
EC GC LC+ +
Sbjct: 378 AECVGCNLCMHV 389
>gi|170701515|ref|ZP_02892467.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
IOP40-10]
gi|170133572|gb|EDT01948.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
IOP40-10]
Length = 435
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVTDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITAEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDAECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|172065004|ref|YP_001815716.1| dihydropyrimidine dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171997246|gb|ACB68163.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
MC40-6]
Length = 435
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVTDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITAQKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDAECVGCNLCMHV 389
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|115360706|ref|YP_777843.1| dihydropyrimidine dehydrogenase [Burkholderia ambifaria AMMD]
gi|115286034|gb|ABI91509.1| dihydroorotate oxidase B, catalytic subunit / dihydrouracil
dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase
(NADP+) [Burkholderia ambifaria AMMD]
Length = 435
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVTDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITAEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDAECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|171320519|ref|ZP_02909546.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
MEX-5]
gi|171094239|gb|EDT39319.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
MEX-5]
Length = 435
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVTDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITAEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDAECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|254250832|ref|ZP_04944151.1| Dihydroorotate dehydrogenase 1 [Burkholderia cenocepacia PC184]
gi|124879966|gb|EAY67322.1| Dihydroorotate dehydrogenase 1 [Burkholderia cenocepacia PC184]
Length = 508
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 174 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 233
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 234 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 293
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P+ PI GIGGI S A +F+ GA +V
Sbjct: 294 GKG--THGGYCGPAVKPIALNMVAEIARDPETPDLPISGIGGISSWRDAAEFMVLGAGSV 351
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 352 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 390
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 391 AVPNVTDWKYL 401
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 383 TLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITATKDGVR 442
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 443 HFEVIDSECVGCNLCMHV 460
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
++ ++ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V
Sbjct: 66 ILTEPNMADLRCIIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV 125
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEK 431
NVS R + G NIELI+++
Sbjct: 126 -NVSSRY----GAVQWNGQRIAGLNNIELITDR 153
>gi|384915903|ref|ZP_10016108.1| Dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum fumariolicum SolV]
gi|384526765|emb|CCG91979.1| Dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum fumariolicum SolV]
Length = 446
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 127/210 (60%), Gaps = 7/210 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM Y++ W EL KK E +GAD +ELN CPHGM ERG G GQDP + R ++
Sbjct: 100 VIVSIMEEYDRKKWEELVKKVEASGADGIELNFGCPHGMPERGTGSKIGQDPTLCREVTS 159
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPN+T+IT AKAA EG A +S INT+ + + + P++G
Sbjct: 160 WVKRGTRLPLIVKLTPNVTDITQTAKAAMEGGASALSLINTIQAITGVDLETFEVLPSIG 219
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFPILGIGGIDSADVALQFIQAGAH 740
K ++YGG SG A +P+ L + +A M PI +GGI + +++F+ GA
Sbjct: 220 GK--SSYGGYSGEAIKPIALGLTAKVASMEMVQEKQVPISAMGGISTWRDSVEFLLLGAS 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLK 770
+VQ+CSAV F ++DD ++GL+ + K
Sbjct: 278 SVQLCSAVMLNGFRIIDDLLSGLKHWMQAK 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
++++S+E G++ NPF LAS PPT +++ V AFE G+G AV KT V NVS R
Sbjct: 1 MIELSIEFAGIRSINPFWLASGPPTNSAAQVNAAFEAGFGGAVWKTIG---TAVENVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKK 464
+ G N+ELIS++ + Q I + + +++ E + KK
Sbjct: 58 YSSYKKWDRILG-----LNNLELISDRPLELNLKEIQEIKKRWPDRAVIVSIMEEYDRKK 112
Query: 465 LN----------SDGVSLQNGLP 477
+DG+ L G P
Sbjct: 113 WEELVKKVEASGADGIELNFGCP 135
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF------ 543
S+ D G+++ + + +L+ + +A I+ CI+C CY+ C D+ ++ I
Sbjct: 311 SIADFRGKSLSHIVPFRKLEPTFKQIAQIDPQKCIHCFLCYIVCRDAAHRCIDLTDGKEL 370
Query: 544 ---------HPETHQAHVTDECTGCTLC 562
H ++C GC+LC
Sbjct: 371 YTMIPPSGKHEWIFPKVRIEDCVGCSLC 398
>gi|385208831|ref|ZP_10035699.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
Ch1-1]
gi|385181169|gb|EIF30445.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
Ch1-1]
Length = 444
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 140/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMF--PNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDVETPNLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDICGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAI +
Sbjct: 312 TLDDICGRAVPNVTDWKYLNLKYDIKARIDQDKCIQCGLCHIACEDTAHQAIMKEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 372 HFEVMDSECVGCNLCMHV 389
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|423720427|ref|ZP_17694609.1| dihydropyrimidine dehydrogenase, subunit B [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366482|gb|EID43772.1| dihydropyrimidine dehydrogenase, subunit B [Geobacillus
thermoglucosidans TNO-09.020]
Length = 427
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 VVASLMVEPKREKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAVQGGADAISMINTINSLMGVDLDTWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P + PI GIGGI S A++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPRIHVPISGIGGISSWKDAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + F +++D I GL L
Sbjct: 278 QVCTAVMHHGFRIIEDMIEGLNYYL 302
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +N+ +LD +VVA IN D+CINC KCY++C D+ +Q I E
Sbjct: 307 IASVMDIVGKSVHKYSNWGDLDLHYKVVARINKDVCINCNKCYISCEDASHQCIDRLTDE 366
Query: 547 THQAHVT---DECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGKEYLKVREEDCVGCNLC------SIVC 389
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVMGFNNIELITDR 80
>gi|336235880|ref|YP_004588496.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|335362735|gb|AEH48415.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 427
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 VVASLMVEPKREKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAVQGGADAISMINTINSLMGVDLDTWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P + PI GIGGI S A++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPRIHVPISGIGGISSWKDAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + F +++D I GL L
Sbjct: 278 QVCTAVMHHGFRIIEDMIEGLNHYL 302
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +N+ +LD +VVA IN D+CINC KCY++C D+ +Q I E
Sbjct: 307 IASVMDIVGKSVHKYSNWGDLDLHYKVVARINKDVCINCNKCYISCEDASHQCIDRLTDE 366
Query: 547 THQAHVT---DECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGKEYLKVREEDCVGCNLC------SIVC 389
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVMGFNNIELITDR 80
>gi|312111477|ref|YP_003989793.1| dihydroorotate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|311216578|gb|ADP75182.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y4.1MC1]
Length = 427
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 VVASLMVEPKREKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAVQGGADAISMINTINSLMGVDLDTWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P + PI GIGGI S A++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPRIHVPISGIGGISSWKDAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + F +++D I GL L
Sbjct: 278 QVCTAVMHHGFRIIEDMIEGLNYYL 302
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +N+ +LD +VVA IN D+CINC KCY++C D+ +Q I E
Sbjct: 307 IASVMDIVGKSVHKYSNWGDLDLHYKVVARINKDVCINCNKCYISCEDASHQCIDRLTDE 366
Query: 547 THQAHVT---DECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGKEYLKVREEDCVGCNLC------SIVC 389
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVMGFNNIELITDR 80
>gi|149919740|ref|ZP_01908217.1| dihydroorotate dehydrogenase family protein [Plesiocystis pacifica
SIR-1]
gi|149819347|gb|EDM78778.1| dihydroorotate dehydrogenase family protein [Plesiocystis pacifica
SIR-1]
Length = 366
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 3/193 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
IL+ASIM Y K+ W E+ ++ + G DA E+NLSCPHG+ ER MG A G DPE+VR +
Sbjct: 106 ILVASIMEEYRKEAWQEMVERVQATGVDAFEMNLSCPHGLPERRMGAAMGGDPEIVREVV 165
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+ IP + K+TPN+ ++T KAA ADG+SAINT+ ++ + D P P V
Sbjct: 166 GWVKEVSTIPVWAKMTPNVGDVTASPKAAVAAGADGISAINTILSVIGVDLDTLKPMPTV 225
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
+ TT GG SG A RP+ L+ V IA+ P I G+GGI S A QF+ G+H VQ
Sbjct: 226 --EGYTTPGGYSGMAARPIALRHVMEIARALPETTISGMGGIYSGGDAAQFVALGSHTVQ 283
Query: 744 ICSAVQNQDFTVV 756
+C+ Q + VV
Sbjct: 284 VCTGAMLQGYKVV 296
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
++V + G++F NPF L S PP T + ++ ++F+ GWG V KT SL V N +PR K
Sbjct: 5 LNVVVNGMEFDNPFLLGSGPPGTNAKVIMKSFDLGWGGNVCKTISLDHSKVINTNPRYAK 64
Query: 408 GTTSRHLYGPEQG----SFLNIELISEKTAFIFFFLFQAIPN-----------FGEYKK- 451
L P+ F NIELIS++ ++ F+ I EY+K
Sbjct: 65 ------LRDPQNHKRVIGFENIELISDRPFDVWLEEFREIKKRYPKHILVASIMEEYRKE 118
Query: 452 IRENLITELNLKKLNSDGVSLQ--NGLPKRQI 481
+ ++ + +++ ++L +GLP+R++
Sbjct: 119 AWQEMVERVQATGVDAFEMNLSCPHGLPERRM 150
>gi|299538616|ref|ZP_07051899.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|424739480|ref|ZP_18167898.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZB2]
gi|298726203|gb|EFI66795.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|422946673|gb|EKU41080.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZB2]
Length = 420
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IIASLMVEPKQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D N P V
Sbjct: 161 WVKEAARTPVIVKLTPNITDITVTAEAATRGGADAVSMINTINSLAGVDLDSWNTVPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGGI + A +FI GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARNPLVNVPISGIGGISNWQDAAEFILMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F++V+D I GL L
Sbjct: 279 VCTAAMHHGFSIVEDMIDGLNNYL 302
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 9/88 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV +++G++VQR +N+ +LD ++VA IN+D+CINC KC++AC D+ +Q I + E
Sbjct: 307 LASVMELVGRSVQRYSNWGDLDLNYKIVAEINNDVCINCNKCHIACEDTSHQCIDLYTEN 366
Query: 548 HQAHV---TDECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 367 GRPMLKVREEDCVGCNLC------SIVC 388
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLRINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ + G F NIELI+++
Sbjct: 58 FAAVSYN----GQRVAGFNNIELITDR 80
>gi|251798657|ref|YP_003013388.1| dihydropyrimidine dehydrogenase [Paenibacillus sp. JDR-2]
gi|247546283|gb|ACT03302.1| dihydroorotate dehydrogenase family protein [Paenibacillus sp.
JDR-2]
Length = 434
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P++V ++
Sbjct: 101 VVVSLMVEPKREKWHEIVKKVEAVGVDGLELNFGCPHGMAERGMGSASGQQPDLVEAQTM 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + + K P VKLTPNIT+IT AKAA G AD +S INT++ L + D N P VG
Sbjct: 161 WAKEAAKTPVIVKLTPNITDITATAKAAVRGGADAISLINTINSLAGVDLDTWNTIPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGG+ + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARNAQVNVPISGIGGVSNWRDAVEFMLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F++V+D I GL L
Sbjct: 279 VCTAAMHHGFSIVEDMIDGLNNYL 302
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G+ PNPF LASAPPT V+RAFE GWG AV KT D + N S R
Sbjct: 1 MADLRINLAGISSPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTLG---DPIINTSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G F NIELI+++
Sbjct: 58 F----AAVHFNGQRVAGFNNIELITDR 80
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPETH 548
SV ++IG++V R +++ +LD QVVA I+++ CI C KC++AC D+ +Q I +
Sbjct: 309 SVTELIGKSVSRYSDWGDLDLNYQVVARIHEENCIVCNKCHIACEDTSHQCIERLTTDDG 368
Query: 549 QAHVT---DECTGCTLCLSILIASIMC 572
+A++ ++C GC LC SI+C
Sbjct: 369 RAYLKVREEDCVGCNLC------SIVC 389
>gi|187924666|ref|YP_001896308.1| dihydropyrimidine dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715860|gb|ACD17084.1| dihydroorotate dehydrogenase family protein [Burkholderia
phytofirmans PsJN]
Length = 444
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D +P P V
Sbjct: 163 WVKEGTRLPCLVKLTPNISDIRTGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMF--PNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PN PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDVETPNLPISGIGGITTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D GL +
Sbjct: 281 QVCTAAMHYGFRIVSDLTDGLSNWM 305
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AVQ VT++ L+ K + A I+ D CI CG C++AC D+ +QAI +
Sbjct: 312 TLDDIRGRAVQNVTDWKYLNLKYDIKARIDQDKCIQCGLCHIACEDTAHQAIMKEKDGVR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+ +
Sbjct: 372 HFEVMDSECVGCNLCMHV 389
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRMAGLNNIELITDR 82
>gi|169827564|ref|YP_001697722.1| dihydropyrimidine dehydrogenase [Lysinibacillus sphaericus C3-41]
gi|168992052|gb|ACA39592.1| dihydropyrimidine dehydrogenase [Lysinibacillus sphaericus C3-41]
Length = 420
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IIASLMVEPKQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D N P V
Sbjct: 161 WVKEAARTPVIVKLTPNITDITVTAEAATRGGADAVSMINTINSLAGVDLDTWNTVPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGGI + A +FI GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARNPLVNVPISGIGGISNWQDAAEFILMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F++V+D I GL L
Sbjct: 279 VCTAAMHHGFSIVEDMIDGLNNYL 302
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV D++G++V R +N+ +LD ++VA IN+D+CINC KC++AC D+ +Q I + E
Sbjct: 307 LASVMDLVGRSVSRYSNWGDLDLNYKIVAEINNDVCINCNKCHIACEDTSHQCIDLYTEN 366
Query: 548 HQAHV---TDECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 367 GRPLLKVREEDCVGCNLC------SIVC 388
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G++ PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLRINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ + G F NIELI+++
Sbjct: 58 FAAVSYN----GQRVAGFNNIELITDR 80
>gi|149183199|ref|ZP_01861646.1| dihydropyrimidine dehydrogenase [Bacillus sp. SG-1]
gi|148849095|gb|EDL63298.1| dihydropyrimidine dehydrogenase [Bacillus sp. SG-1]
Length = 428
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 142/266 (53%), Gaps = 28/266 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ KK E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IIASLMVEPKQEKWHEIVKKVEAVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + K P VKLTPNIT+IT A+AA +G AD VS INT++ L + D N P V
Sbjct: 161 WAKEVAKTPVIVKLTPNITDITVTAEAAVQGGADAVSMINTINSLAGVDLDSWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI G+GG+ + A++FI GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPISLNMVAECARNPRVNVPISGMGGVSNWQDAVEFILMGASGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+C+A + F +V+D I GL L +KG + Q D GK+
Sbjct: 279 VCTAAMHHGFRIVEDMIDGLNNYL-------------------DEKGIASVQ--DIVGKS 317
Query: 804 IPNFGEYKKIRENLITELNLKKLNSD 829
+P + ++ + N + K+N+D
Sbjct: 318 VPKYSDWGNLDLNYSV---VAKINND 340
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++++++ G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MANLNIDLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIINVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVAGFNNIELITDR 80
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV+D++G++V + +++ LD VVA IN+D+CINC KC++AC D+ +Q I ++
Sbjct: 307 IASVQDIVGKSVPKYSDWGNLDLNYSVVAKINNDVCINCNKCHIACEDTSHQCIDMLKDS 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
++C GC LC SI+C
Sbjct: 367 SGNSYLKVREEDCVGCNLC------SIVC 389
>gi|433544400|ref|ZP_20500785.1| dihydropyrimidine dehydrogenase subunit B [Brevibacillus agri
BAB-2500]
gi|432184328|gb|ELK41844.1| dihydropyrimidine dehydrogenase subunit B [Brevibacillus agri
BAB-2500]
Length = 425
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M + ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P+++R
Sbjct: 101 LIASLMVEHKQEAWHEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
WV+ + P VKLTPNIT+I A+AA G AD +S INT++ LM + D P P V
Sbjct: 161 WVKEVAQTPVIVKLTPNITDIRFTARAASAGGADAISMINTINSLMGVDLDKWLPIPHVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ F PI GIGGI + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARDPFVGVPISGIGGISNWRDAVEFLLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F +V+D I GL L
Sbjct: 279 VCTAAMHHGFRIVEDMIDGLNNYL 302
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+ PNPF LASAPPT + V+RAFE GWG AV KT + + NV+ R
Sbjct: 1 MADLSINLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIINVTSR 57
Query: 405 IVKGT-TSRHLYGPEQGSFLNIELISEK 431
T + ++G F NIELI++K
Sbjct: 58 FAGLTFGGQRVFG-----FNNIELITDK 80
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L N L +R+I SV D++G+AV +++ L+ +VVA I+++ CINC KC++
Sbjct: 298 LNNYLDQRKI-------ASVMDIVGKAVHTYSDWGHLNLNYKVVARIHEETCINCNKCHI 350
Query: 532 ACNDSGYQAITFHPETHQAH-----VTDECTGCTLCLSILIASIMC 572
AC D+ +Q I + ++C GC LC SI+C
Sbjct: 351 ACEDTSHQCIDIVKDAATGKERLVVREEDCVGCNLC------SIVC 390
>gi|399048941|ref|ZP_10740218.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
CF112]
gi|29170609|gb|AAO66291.1| dihydropyrimidine dehydrogenase [Brevibacillus agri]
gi|398053267|gb|EJL45466.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
CF112]
Length = 425
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M + ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P+++R
Sbjct: 101 LIASLMVEHKQEAWHEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
WV+ + P VKLTPNIT+I A+AA G AD +S INT++ LM + D P P V
Sbjct: 161 WVKEVAQTPVIVKLTPNITDIRFTARAASAGGADAISMINTINSLMGVDLDKWLPIPHVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ F PI GIGGI + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARDPFVGVPISGIGGISNWRDAVEFLLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F +V+D I GL L
Sbjct: 279 VCTAAMHHGFRIVEDMIDGLNNYL 302
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+ PNPF LASAPPT + V+RAFE GWG AV KT + + NV+ R
Sbjct: 1 MADLSINLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIINVTSR 57
Query: 405 IVKGT-TSRHLYGPEQGSFLNIELISEK 431
T + ++G F NIELI++K
Sbjct: 58 FAGLTFGGQRVFG-----FNNIELITDK 80
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L N L +R+I SV D++G+AV +++ L+ +VVA I+++ CINC KC++
Sbjct: 298 LNNYLDQRKI-------ASVMDIVGKAVHTYSDWGHLNLNYKVVARIHEETCINCNKCHI 350
Query: 532 ACNDSGYQAITFHPETHQAH-----VTDECTGCTLCLSILIASIMC 572
AC D+ +Q I + ++C GC LC SI+C
Sbjct: 351 ACEDTSHQCIDIVKDAATGKERLVVREEDCVGCNLC------SIVC 390
>gi|56419957|ref|YP_147275.1| dihydropyrimidine dehydrogenase [Geobacillus kaustophilus HTA426]
gi|56379799|dbj|BAD75707.1| dihydropyrimidine dehydrogenase [Geobacillus kaustophilus HTA426]
Length = 429
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 123/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 VVASLMVEPKREKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVERQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAAQGGADAISLINTINSLMGVDLDTWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P PI GIGGI + A++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPRIRIPISGIGGISNWRDAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + F +++D I GL L
Sbjct: 278 QVCTAVMHHGFRIIEDMIEGLNHYL 302
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAISFNGQRVMGFNNIELITDR 80
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +++ +LD +VVA I+ + CI C KCY++C D+ +Q I E
Sbjct: 307 IASVMDIVGKSVSKYSDWGDLDLNYKVVARIHRERCIQCNKCYISCEDASHQCIERLVDE 366
Query: 547 THQAHV---TDECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGKEYLKVREEDCVGCNLC------SIVC 389
>gi|375008433|ref|YP_004982066.1| Dihydroorotate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287282|gb|AEV18966.1| Dihydroorotate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 429
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 123/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 VVASLMVEPKREKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVERQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAAQGGADAISLINTINSLMGVDLDTWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P PI GIGGI + A++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPRIRIPISGIGGISNWRDAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + F +++D I GL L
Sbjct: 278 QVCTAVMHHGFRIIEDMIEGLNHYL 302
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAISFNGQRVMGFNNIELITDR 80
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +++ +LD +VVA I+ + CI C KCY++C D+ +Q I E
Sbjct: 307 IASVMDIVGKSVSKYSDWGDLDLNYKVVARIHRERCIQCNKCYISCEDASHQCIERLVDE 366
Query: 547 THQAHV---TDECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGKEYLKVREEDCVGCNLC------SIVC 389
>gi|126651249|ref|ZP_01723459.1| dihydropyrimidine dehydrogenase [Bacillus sp. B14905]
gi|126592087|gb|EAZ86153.1| dihydropyrimidine dehydrogenase [Bacillus sp. B14905]
Length = 427
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 108 IIASLMVEPKQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 167
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + + P VKLTPNIT+IT A+AA G AD +S INT++ L + D N P V
Sbjct: 168 WVKEAARTPVIVKLTPNITDITVTAEAAKRGGADAISMINTINSLAGVDLDTWNTVPHVA 227
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGGI + A +FI GA VQ
Sbjct: 228 GKG--AHGGYCGPAVKPIALNMVAECARNPLVNVPISGIGGISNWQDAAEFILMGATGVQ 285
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F++V+D I GL L
Sbjct: 286 VCTAAMHHGFSIVEDMIDGLNNYL 309
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV D++G++V R +N+ +LD ++VA IN+D+CINC KC++AC D+ +Q I + E
Sbjct: 314 LASVMDLVGRSVSRYSNWGDLDLNYKIVAEINNDVCINCNKCHIACEDTSHQCIDLYTEN 373
Query: 548 HQAHVT---DECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 374 GRPLLKVREEDCVGCNLC------SIVC 395
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G++ PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 8 MADLRINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 64
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 65 F----AAVSFNGQRVAGFNNIELITDR 87
>gi|186476292|ref|YP_001857762.1| dihydropyrimidine dehydrogenase [Burkholderia phymatum STM815]
gi|184192751|gb|ACC70716.1| dihydroorotate dehydrogenase family protein [Burkholderia phymatum
STM815]
Length = 436
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 139/251 (55%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AA++G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAWKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P PI GIGGI S A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPETPGLPISGIGGISSWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG + D G+
Sbjct: 281 QVCTAAMHYGFRIVSDMADGLSNWM-------------------DEKGYATLE--DIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
+++D+ G+AV VT++ L+ K + A I+ CI CG C++AC D+ +QAIT +
Sbjct: 312 TLEDIRGRAVPNVTDWKYLNLKYDIKARIDQHKCIQCGLCHIACEDTSHQAITREKDGKR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +C GC LC+ +
Sbjct: 372 HFEVIDAQCVGCNLCMHV 389
>gi|261419625|ref|YP_003253307.1| dihydropyrimidine dehydrogenase [Geobacillus sp. Y412MC61]
gi|319766442|ref|YP_004131943.1| dihydroorotate dehydrogenase [Geobacillus sp. Y412MC52]
gi|261376082|gb|ACX78825.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y412MC61]
gi|317111308|gb|ADU93800.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y412MC52]
Length = 429
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 123/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 VVASLMVEPKREKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVERQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAAQGGADAISLINTINSLMGVDLDTWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P PI GIGGI + A++F+ GA V
Sbjct: 221 GK--GAHGGYCGPAVKPIALNMVAECAR-HPRIRIPISGIGGISNWRDAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + F +++D I GL L
Sbjct: 278 QVCTAVMHHGFRIIEDMIEGLNHYL 302
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAISFNGQRVMGFNNIELITDR 80
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +++ +LD +VVA I+ + CI C KCY++C D+ +Q I E
Sbjct: 307 IASVMDIVGKSVSKYSDWGDLDLNYKVVARIHRERCIQCNKCYISCEDASHQCIERLVDE 366
Query: 547 THQAHV---TDECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGKEYLKVREEDCVGCNLC------SIVC 389
>gi|410454621|ref|ZP_11308545.1| dihydropyrimidine dehydrogenase subunit B [Bacillus bataviensis LMG
21833]
gi|409930551|gb|EKN67547.1| dihydropyrimidine dehydrogenase subunit B [Bacillus bataviensis LMG
21833]
Length = 428
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ P +V +
Sbjct: 101 IIASLMVEPKQEKWHEIVKQVEDVGVDGLELNFGCPHGMAERGMGAASGQVPALVERQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K P VKLTPNIT+IT A+AA G AD +S INT++ LM + D N P V
Sbjct: 161 WVKEVAKTPVIVKLTPNITDITATAEAACNGGADAISMINTINSLMGVDLDSWNTIPHVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGGI + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARHPHINVPISGIGGISNWQDAVEFMLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F +V+D I GL L
Sbjct: 279 VCTAAMHHGFRIVEDMIEGLSNYL 302
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G+K PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLRINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAISFNGQRVAGFNNIELITDR 80
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---- 543
I S+ ++IG++V R +++ LD +VA IN D+CINC KC++AC D+ +Q I
Sbjct: 307 ISSISEIIGKSVPRYSDWGNLDLNYNIVAKINTDVCINCNKCHIACEDTSHQCIDMLTDA 366
Query: 544 HPETHQAHVTDECTGCTLCLSILIASIMCTYNK-----DDWLELSKKTEKAGADALELNL 598
+++ ++C GC LC SI+C + + EL+ T AL L +
Sbjct: 367 SGKSYLKVREEDCVGCNLC------SIVCPVDGAIDMVEATRELAPMTWNERQAALSLAV 420
Query: 599 SC 600
C
Sbjct: 421 EC 422
>gi|344171667|emb|CCA84287.1| putative dihydroorotate dehydrogenase,FMN-linked, 4Fe-4S
ferredoxin-type protein [Ralstonia syzygii R24]
Length = 435
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPMVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYVERVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV++ ++P VKLTPNIT+I ++AAY G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKAGTRLPCLVKLTPNITDIRLGSRAAYRGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDAQTPGLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D GL +
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLANWM 305
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ + + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGKAVSNVTDWKYLNLEYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGKR 371
Query: 548 HQAHVTDECTGCTLCLSILIASIMCTYNKDD------WLELSKKTEKAGADALELNLSCP 601
H + EC GC LC+ + T + D W +AGA+ E P
Sbjct: 372 HFEVIDAECVGCNLCMHVCPVEQCITMARVDAGGYANWTTHPNNPVRAGAEVPEAGAGTP 431
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+K PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGIKSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|407774046|ref|ZP_11121345.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
profundimaris WP0211]
gi|407282705|gb|EKF08262.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
profundimaris WP0211]
Length = 425
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 5/206 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I S+M + W +L+++ ++G LELNL CPHGM ERGMG A GQ PEMV ++
Sbjct: 102 VIIGSMMAPIEERAWKDLAQQIAESGVHGLELNLGCPHGMCERGMGSAIGQVPEMVEQVT 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
WV+ +V IP F KLTPNITNI A+AA +G AD VS INTV+ ++S+ D P P V
Sbjct: 162 RWVKDAVDIPVFTKLTPNITNILWSAEAALKGGADAVSLINTVNSIVSVDIDNMIPEPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+GG G+A +P+ L V+ IA+ + I GIGGI + A++F+ G++A
Sbjct: 222 DGKG--THGGYCGSAVKPIALNMVAEIARTPETRDLEISGIGGITTWKDAVEFMALGSNA 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A F VVDD I G+ +
Sbjct: 280 VQVCTAAMIYGFRVVDDLIDGMSQWM 305
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF--HPET 547
SV+ AV +V+++ EL+ A+IN D CI CG+C++AC D+ +QAIT PE
Sbjct: 312 SVEQFTRAAVPQVSDWNELNMNFDTKAVINPDNCIECGRCHIACEDTSHQAITMTDKPEG 371
Query: 548 HQAH--VTDECTGCTLCLSI 565
+ V +EC GC LC I
Sbjct: 372 GRLFEVVDEECVGCNLCYHI 391
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S +I G+ NPF LASAPPT V RAFE GWG V KT + +V NVS R
Sbjct: 1 MADLSCKIAGIDSLNPFWLASAPPTDKKYNVVRAFEAGWGGVVWKTLGIDPPVV-NVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
+R L G NIELIS++
Sbjct: 60 YGAHHDQNRRLLG-----INNIELISDR 82
>gi|62871418|gb|AAY18593.1| putative dihydropyrimidinase dehydrogenase [Bacillus sp. TS-23]
Length = 349
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ + G D ELN CPHGM ERGMG A GQ PE+V +
Sbjct: 23 IIASLMVEPKREKWHEIVKRVQDVGVDGFELNFGCPHGMAERGMGSASGQVPELVEKQTY 82
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ LM + D W P
Sbjct: 83 WVKEVAEKPVIVKLTPNITDITATAEAAVQGGADAISMINTINSLMGVDLD--TWHTIPH 140
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAH 740
V K +GG G A +P+ L V+ A+ P N PI G+GG+ S A++F+ GA
Sbjct: 141 VAGKG--AHGGYCGPAVKPIALNMVAECAR-HPRINVPISGMGGVSSWKEAVEFMLMGAT 197
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKS 771
VQ+C+AV + F +++D + GL LYL S
Sbjct: 198 GVQVCTAVMHHGFRIIEDMVEGLH--LYLDS 226
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE- 546
I SV D++G+AV R +++ LD +V A IN D+CINC KCY+AC D+ +Q I +
Sbjct: 229 IASVMDLVGKAVHRYSDWGNLDLNYKVAARINTDVCINCNKCYIACEDASHQCIDRRADA 288
Query: 547 THQAHV---TDECTGCTLC 562
T + ++ ++C GC LC
Sbjct: 289 TGREYLKVREEDCVGCNLC 307
>gi|300691785|ref|YP_003752780.1| dihydroorotate dehydrogenase, FMN-linked, 4Fe-4S ferredoxin-type
protein [Ralstonia solanacearum PSI07]
gi|299078845|emb|CBJ51506.1| putative dihydroorotate dehydrogenase, FMN-linked, 4Fe-4S
ferredoxin-type protein [Ralstonia solanacearum PSI07]
gi|344166975|emb|CCA79165.1| putative dihydroorotate dehydrogenase,FMN-linked, 4Fe-4S
ferredoxin-type protein [blood disease bacterium R229]
Length = 435
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCNERDWKWILPMVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV++ ++P VKLTPNIT+I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKAGTRLPCLVKLTPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDAQTPGLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D GL +
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLANWM 305
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ DV G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDVRGKAVSNVTDWKYLNLKYDIKARIDQDRCIQCGLCHIACEDTSHQAITREKDGKR 371
Query: 548 HQAHVTDECTGCTLCLSILIASIMCTYNKDD------WLELSKKTEKAGADALELNLSCP 601
H + EC GC LC+ + T + D W +AGA+ E P
Sbjct: 372 HFEVIDAECVGCNLCMHVCPVEQCITMARVDAGGYANWTTHPNNPVRAGAEVPEAGAGTP 431
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+K PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGIKSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRIAGLNNIELITDR 82
>gi|390571472|ref|ZP_10251713.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia terrae
BS001]
gi|420251732|ref|ZP_14754893.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. BT03]
gi|389936575|gb|EIM98462.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia terrae
BS001]
gi|398057255|gb|EJL49227.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. BT03]
Length = 437
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 138/251 (54%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N+ DW + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 MIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K+P VKLTPNI++I ++AAY+G ADGVS INT++ ++++ D P P V
Sbjct: 163 WVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P PI GIGGI + A +F+ GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDSETPGLPISGIGGISTWRDAAEFMVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V D GL + +KG D G+
Sbjct: 281 QVCTAAMHYGFRIVSDLADGLSNWM-------------------DEKGYAT--LDDIRGR 319
Query: 803 AIPNFGEYKKI 813
A+PN ++K +
Sbjct: 320 AVPNVTDWKYL 330
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 TLDDIRGRAVPNVTDWKYLNMKYDIKARIDQDKCIQCGLCHIACEDTSHQAITREKDGKR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V EC GC LC+ +
Sbjct: 372 HFEVVDAECVGCNLCMHV 389
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G NIELI+++
Sbjct: 60 Y----GAVQWNGQRMAGLNNIELITDR 82
>gi|380797363|gb|AFE70557.1| dihydropyrimidine dehydrogenase [NADP+] isoform 1, partial [Macaca
mulatta]
Length = 269
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 106/145 (73%), Gaps = 3/145 (2%)
Query: 687 KLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICS 746
K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q+CS
Sbjct: 2 KRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCS 61
Query: 747 AVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIP 805
A+QNQDFTV++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K +P
Sbjct: 62 AIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDKKLP 121
Query: 806 NFGEYKKIRENLITE--LNLKKLNS 828
+FG Y + R+ +I E + LK+ N+
Sbjct: 122 SFGPYLEQRKKIIAENKIRLKEQNA 146
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I E + LK+ N+ L KR P + +VKDVIG+A
Sbjct: 118 KKLPSFGPYLEQRKKIIAENKIRLKEQNAAFSPL-----KRNCFIPKWPVPTVKDVIGKA 172
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTG
Sbjct: 173 LQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIRFDPETHLPTITDTCTG 232
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 233 CTLCLSV 239
>gi|229162093|ref|ZP_04290066.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus R309803]
gi|228621415|gb|EEK78268.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus R309803]
Length = 416
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 125/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M + W E+ K+ + G D ELN CPHGM ERGMG A GQ P++V +
Sbjct: 101 IIASLMVEPKQHQWHEIVKRVQDVGVDGFELNFGCPHGMAERGMGSASGQVPDLVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT+IT+ A AA +G AD VS INT++ LM ++ D NP P V
Sbjct: 161 WVKEVAEVPVIVKLTPNITDITETAYAAVQGGADAVSMINTINSLMGVNIDTWNPIPHVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P N PI G+GGI + ++FI G+ +V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPEINVPISGMGGISNWRDTVEFILMGSTSV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F++++D + GL L
Sbjct: 278 QVCTAAMHHGFSIIEDMLDGLNNYL 302
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAF GWG AV KT V NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFAAGWGGAVWKTLGAP---VVNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
++ + G + F NIELIS++
Sbjct: 58 F----SATNFQGKKVAGFNNIELISDR 80
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV D++G++V R +N+ +L+ VVA INDD+CI C KCY++C D+ +Q I
Sbjct: 307 ISSVMDIVGKSVPRYSNWGDLNLSYHVVARINDDVCIKCNKCYISCEDTSHQCIEIFTND 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 367 NGSKFLKVREEDCVGCNLC------SIVC 389
>gi|410632621|ref|ZP_11343276.1| dihydroorotate dehydrogenase family protein [Glaciecola arctica
BSs20135]
gi|410147858|dbj|GAC20143.1| dihydroorotate dehydrogenase family protein [Glaciecola arctica
BSs20135]
Length = 439
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 141/259 (54%), Gaps = 26/259 (10%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I S+M ++ W EL+ K +G +ELNL CPHGM ERGMG A GQ PE++ +
Sbjct: 102 VIIGSMMAPLDEKTWKELAIKIANSGVHGIELNLGCPHGMCERGMGSAIGQVPELIEQTT 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
WV+ V IP F KLTPNIT+I A+AA +G AD VS INTV+ + S+ D P P V
Sbjct: 162 RWVKEVVDIPVFTKLTPNITDILVAAEAALKGGADAVSLINTVNSIASVDLDLMAPTPTV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+GG G+A +P+ L V IA+ N I IGGI++ A +FI GA
Sbjct: 222 DGKG--THGGYCGSAVKPIALHMVGEIARNPDTRNLQISAIGGIETWRDAAEFIALGASG 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
VQ+C+A F +VDD I GL+ L KG+ S A+Q G
Sbjct: 280 VQVCTAAMLYGFRIVDDMIAGLENFL-----DEKGYASLS-----------AFQ-----G 318
Query: 802 KAIPNFGEYKKIRENLITE 820
KAIPN + ++ N T+
Sbjct: 319 KAIPNVVNWNELNINFDTK 337
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
G+A+ V N+ EL+ A IN+D+CI CG+C++AC D+ +QAIT T
Sbjct: 318 GKAIPNVVNWNELNINFDTKAFINEDLCIECGRCFIACEDTSHQAITMQENTSGGRDFVV 377
Query: 552 VTDECTGCTLC 562
V DEC GC LC
Sbjct: 378 VDDECVGCNLC 388
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
++ I G+ NPF LASAPPT V RAFE GWG V KT + ++ S V
Sbjct: 4 LACNIAGIDSINPFWLASAPPTDKYINVVRAFEAGWGGVVWKTLGIDPPVINMSSRYGVH 63
Query: 408 GTTSRHLYGPEQGSFLNIELISEK 431
+R++ G NIELI+++
Sbjct: 64 HDRARNVIG-----INNIELITDR 82
>gi|223938296|ref|ZP_03630191.1| dihydroorotate dehydrogenase family protein [bacterium Ellin514]
gi|223893010|gb|EEF59476.1| dihydroorotate dehydrogenase family protein [bacterium Ellin514]
Length = 374
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 125/197 (63%), Gaps = 7/197 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM Y KD W+E+ ++ + AG DA ELN SCPHG+ ER MG A GQDP++++ +
Sbjct: 103 VLIASIMEEYRKDGWIEIVERCQDAGVDAFELNFSCPHGLPERKMGAAMGQDPDVLKEVC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+S+ K P + K+TPN+T+I D ++AA G A G+SAINT+ + ++ D P P V
Sbjct: 163 GWVKSAAKKPVWAKMTPNVTHIEDPSRAALLGGATGLSAINTIRSVTGVNLDTLRPEPTV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFPILGIGGIDSADVALQFIQAGA 739
+ TT GG S A +P+ L+ V IA+M FP + G+GGI+S + A QFI G+
Sbjct: 223 --EGYTTPGGYSCKAVKPIALRMVMEIAQMIRKEFPGRSLSGLGGIESGNDAAQFILLGS 280
Query: 740 HAVQICSAVQNQDFTVV 756
VQ+C+ V + V
Sbjct: 281 DTVQVCTGVMKFGYECV 297
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
++ + GLK PNPF + S PP T +++ +AF+ GWG + KT SL V NV+PR K
Sbjct: 4 LATTVDGLKLPNPFIIGSGPPGTNLNVITKAFKEGWGAVIAKTVSLDSSKVVNVTPRYAK 63
Query: 408 -GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQ 441
S + G E NIELIS++ ++ F+
Sbjct: 64 LLANSGEVIGWE-----NIELISDRPFHLWIEEFK 93
>gi|403235178|ref|ZP_10913764.1| dihydropyrimidine dehydrogenase subunit B [Bacillus sp. 10403023]
Length = 427
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ P +V +
Sbjct: 101 IIASLMVEPKQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPSLVEQQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + P VKLTPNIT+IT A+AA G AD +S INT++ L + D N P VG
Sbjct: 161 WVKEVAQTPVIVKLTPNITDITATAEAATRGGADAISMINTINSLAGVDLDTWNTIPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGGI + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARSPHINVPISGIGGISTWQDAVEFMLMGASGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLK 770
+C+A + F +V+D I GL L K
Sbjct: 279 VCTAAMHHGFRIVEDMIEGLDNYLDQK 305
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV D++G+ V + +++ +LD ++VA IN+D+CINC KC++AC D+ +Q I +
Sbjct: 307 IASVMDIVGKTVPKYSDWGDLDLNYKIVARINNDVCINCNKCHIACEDTSHQCIDMLKDG 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ ++ ++C GC LC SI+C
Sbjct: 367 NGYNILKVREEDCVGCNLC------SIVC 389
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G++ PNPF LASAPPT + V+RAF+ GWG AV KT D + NV+ R
Sbjct: 1 MADLRINLAGIESPNPFWLASAPPTNSGYQVQRAFDAGWGGAVWKTLG---DPILNVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
G S G F NIELIS++
Sbjct: 58 F--GAVS--FNGQRVAGFNNIELISDR 80
>gi|229037740|ref|ZP_04189575.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus AH1271]
gi|228727594|gb|EEL78735.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus AH1271]
Length = 416
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 125/205 (60%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M + W E+ K+ + G D ELN CPHGM ERGMG A GQ P++V +
Sbjct: 101 IIASLMVEPKQHQWHEIVKRVQDVGVDGFELNFGCPHGMAERGMGSASGQVPDLVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT+IT+ A AA +G AD VS INT++ LM ++ D NP P V
Sbjct: 161 WVKEVAEVPVIVKLTPNITDITETAYAAVKGGADAVSMINTINSLMGVNIDTWNPIPHVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P N PI G+GGI + ++FI G+ +V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-HPEINVPISGMGGISNWRDTVEFILMGSTSV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F++++D + GL L
Sbjct: 278 QVCTAAMHHGFSIIEDMLDGLNNYL 302
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAF GWG AV KT V NVS R
Sbjct: 1 MADLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFAAGWGGAVWKTLGAP---VVNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
++ + G + F NIELIS++
Sbjct: 58 F----SATNFQGKKVAGFNNIELISDR 80
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV D++G++V R +N+ +L+ VVA INDD+CI C KCY++C D+ +Q I
Sbjct: 307 ISSVMDIVGKSVPRYSNWGDLNLSYHVVARINDDVCIKCNKCYISCEDTSHQCIEILTND 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNLS 599
+ ++C GC LC SI+C D +++ + T KA EL S
Sbjct: 367 KGSKFLKVREEDCVGCNLC------SIVCPV--DGAIDMIETTSKAPVTWNELQAS 414
>gi|89097591|ref|ZP_01170480.1| dihydropyrimidine dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89087887|gb|EAR66999.1| dihydropyrimidine dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 429
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 138/253 (54%), Gaps = 25/253 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E+ G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IIASLMVEPKQEKWHEIVKRVEEIGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + + + P VKLTPNIT+IT A+AA +G AD VS INT++ L + D N P VG
Sbjct: 161 WAKEAARTPVIVKLTPNITDITATAEAAVKGGADAVSMINTINSLAGVDLDTWNTIPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ + PI G+GGI + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARNPAISVPISGMGGISNWQNAVEFMLMGASGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
IC+A + F +++D + GL YL ++ RD GK+
Sbjct: 279 ICTAAMHHGFRIIEDLMDGLNN--YLDERGIR-------------------SVRDIIGKS 317
Query: 804 IPNFGEYKKIREN 816
+P + ++ + N
Sbjct: 318 VPRYSDWGNLDLN 330
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E+ G+K NPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLSIELAGIKSTNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVAGFNNIELITDR 80
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV+D+IG++V R +++ LD + A I+ D+CINC KC++AC D+ +Q I +
Sbjct: 307 IRSVRDIIGKSVPRYSDWGNLDLNYNIAARIDPDICINCNKCHIACEDTSHQCIDMLVDE 366
Query: 548 HQAHV----TDECTGCTLCL-------SILIASIMCTYNKDDWLELSKKTEKAGADALEL 596
+ ++C GC LC +I + + T W E ++ AGA A EL
Sbjct: 367 NGKEYLKVREEDCVGCNLCSIVCPEEGAISMVELPHTQPPMTWNE--RQAAIAGAQACEL 424
Query: 597 NLS 599
+LS
Sbjct: 425 DLS 427
>gi|406666658|ref|ZP_11074423.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Bacillus isronensis B3W22]
gi|405385428|gb|EKB44862.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Bacillus isronensis B3W22]
Length = 427
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 8/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M + W E+ K+ + G D ELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IIASLMVEPKAEKWHEIVKRVQDVGVDGFELNFGCPHGMAERGMGAASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + ++P VKLTPNIT+IT A+AA G AD +S INT++ L + D N W P
Sbjct: 161 WAKEYAEVPVIVKLTPNITDITVTAEAAVRGGADAISMINTINSLAGV--DLNSWNTIPH 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHA 741
VG K +GG G A +P+ L V A+ + N PI GIGGI + A +FI G+ +
Sbjct: 219 VGNKG--AHGGYCGPAVKPIALNMVGECARSPYINLPISGIGGISNWQDAAEFILMGSTS 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A + F +V+D I GL L
Sbjct: 277 VQVCTAAMHHGFGIVEDMIDGLNNYL 302
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ ++ G+K PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLRIDFAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G + F NIELI+++
Sbjct: 58 F----AAVSFNGQKVAGFNNIELITDR 80
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 9/88 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV D++G+ V + +++ +LD +VVA IN+D+CINC KC++AC D+ +Q I + E
Sbjct: 307 LASVTDLVGKTVPKYSDWGDLDLNYKVVAEINNDVCINCNKCHIACEDTSHQCIDLYTED 366
Query: 548 HQAHVT---DECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 367 GRPMLKVREEDCVGCNLC------SIVC 388
>gi|393199488|ref|YP_006461330.1| dihydroorotate dehydrogenase [Solibacillus silvestris StLB046]
gi|327438819|dbj|BAK15184.1| dihydroorotate dehydrogenase [Solibacillus silvestris StLB046]
Length = 427
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 8/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M + W E+ K+ + G D ELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IIASLMVEPKAEKWHEIVKRVQDVGVDGFELNFGCPHGMAERGMGAASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + ++P VKLTPNIT+IT A+AA G AD +S INT++ L + D N W P
Sbjct: 161 WAKEYAEVPVIVKLTPNITDITVTAEAAVRGGADAISMINTINSLAGV--DLNSWNTIPH 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHA 741
VG K +GG G A +P+ L V A+ + N PI GIGGI + A +FI G+ +
Sbjct: 219 VGNKG--AHGGYCGPAVKPIALNMVGECARSPYINLPISGIGGISNWQDAAEFILMGSTS 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A + F +V+D I GL L
Sbjct: 277 VQVCTAAMHHGFGIVEDMIDGLNNYL 302
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ ++ G+K PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLRIDFAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G + F NIELI+++
Sbjct: 58 F----AAVSFNGQKVAGFNNIELITDR 80
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 9/88 (10%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV D++G+ V + +++ +LD +VVA IN+D+CINC KC++AC D+ +Q I + E
Sbjct: 307 LASVMDLVGKTVPKYSDWGDLDLNYKVVAEINNDICINCNKCHIACEDTSHQCIDLYTED 366
Query: 548 HQAHVT---DECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 367 GRPMLKVREEDCVGCNLC------SIVC 388
>gi|392955834|ref|ZP_10321364.1| dihydropyrimidine dehydrogenase subunit B [Bacillus macauensis
ZFHKF-1]
gi|391878076|gb|EIT86666.1| dihydropyrimidine dehydrogenase subunit B [Bacillus macauensis
ZFHKF-1]
Length = 422
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 10/210 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ P++V+ +
Sbjct: 101 IIASLMVEPKQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGAASGQQPDLVQAQTT 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + K P VKLTPNIT+IT A+AA G AD +S INT++ LM + D W P+
Sbjct: 161 WAKEVAKTPVIVKLTPNITDITVTARAAVNGGADAISMINTINSLMGVDLDS--WQTVPS 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAH 740
V K +GG G A +P+ L V+ A+ P PI GIGG+ + A++F+ GA
Sbjct: 219 VAGKG--AHGGYCGPAVKPIALNMVAECAR-HPAIAVPISGIGGVGTWQDAVEFMLMGAT 275
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLK 770
VQ+C+A + F++V+D I GL L K
Sbjct: 276 GVQVCTAAMHHGFSIVEDMIDGLNNYLEEK 305
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G+ PNPF LASAPPT + V+RAFE GWG AV KT + + N S R
Sbjct: 1 MADLRTNLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIINTSAR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G + F NIELI+++
Sbjct: 58 F----AAISFQGKKVAGFNNIELITDR 80
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE- 546
+ SV ++IG++V + + LD + VA IN D+CI+C KC++AC D+ +Q I
Sbjct: 307 LASVSELIGKSVANYSEWGNLDLNYRTVASINTDVCIHCNKCHIACEDTSHQCIERKIAL 366
Query: 547 --THQAHVTDE-CTGCTLCLSILIASIMC 572
T HV +E C GC LC SI+C
Sbjct: 367 DGTPFLHVREEDCVGCNLC------SIVC 389
>gi|288554818|ref|YP_003426753.1| dihydropyrimidine dehydrogenase subunit B [Bacillus pseudofirmus
OF4]
gi|288545978|gb|ADC49861.1| dihydropyrimidine dehydrogenase [Bacillus pseudofirmus OF4]
Length = 428
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 4/211 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 100 VIIASLMVEPRQEAWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQT 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W + + P VKLTPNIT+IT A+AA +G AD VS INT++ L + D N P V
Sbjct: 160 YWAKEVAQTPVIVKLTPNITDITVTAEAAVQGGADAVSMINTINSLAGVDIDSWNTVPHV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ N PI G+GG+ + + A++F+ GA V
Sbjct: 220 AGKG--AHGGYCGPAVKPIALNMVAECARNPHVNVPISGMGGVSNWENAVEFMLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A + F +V+D + GL L K +
Sbjct: 278 QVCTAAMHHGFRIVEDMLDGLNNYLDEKGIE 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ ++ G+K PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLRIDFAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G + F NIELI+++
Sbjct: 58 F----AAVSFNGQKVAGFNNIELITDR 80
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV D++G++V +++ LD +VVA IN+D+CINC KC++AC D+ +Q I +
Sbjct: 307 IESVMDIVGKSVTNYSDWGNLDLNYKVVAQINNDVCINCNKCHIACEDTSHQCIDMLKDD 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ D+C GC LC SI+C
Sbjct: 367 RGNDILKVREDDCVGCNLC------SIVC 389
>gi|168015012|ref|XP_001760045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688795|gb|EDQ75170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YN+D W E+ ++ E+ G DA E+N SCPHGM ER MG+A GQD ++ +
Sbjct: 115 ILIASIMEEYNRDAWEEIIERVEETGVDAFEVNFSCPHGMPERKMGMAMGQDCSVLDEVC 174
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + IP + K+TPNIT+IT A+ A +GV+AINT++ +M ++ D P P V
Sbjct: 175 GWINAKATIPVWAKMTPNITDITQPARVALNAGCEGVAAINTITSVMGINLDTLRPEPCV 234
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM----FP--NFPILGIGGIDSADVALQFIQA 737
+ +T GG S A RP+ L V SIA+M FP N + GIGGI++ D A +FI
Sbjct: 235 --EGYSTPGGYSSKAVRPIALAKVMSIAQMMKAEFPGQNKSLSGIGGIETGDHAAEFILL 292
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA VQ+C+ V + V T LQ +
Sbjct: 293 GADTVQVCTGVMLHGYGHVKHLCTDLQAFM 322
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 35/174 (20%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 10 DLSVTVNGLKLPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDSSKVVNVTPRYA 69
Query: 407 KGTTSRHLYG--PEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRE---------N 455
+ S L G PE + NIELIS++ F+ + E K+++E +
Sbjct: 70 RLKASA-LSGKKPEVIGWENIELISDRP-------FETM--LAEMKQLKEEYPDRILIAS 119
Query: 456 LITELN-------LKKLNSDGV-------SLQNGLPKRQINTPVETILSVKDVI 495
++ E N ++++ GV S +G+P+R++ + SV D +
Sbjct: 120 IMEEYNRDAWEEIIERVEETGVDAFEVNFSCPHGMPERKMGMAMGQDCSVLDEV 173
>gi|56965540|ref|YP_177274.1| dihydropyrimidine dehydrogenase [Bacillus clausii KSM-K16]
gi|56911786|dbj|BAD66313.1| dihydropyrimidine dehydrogenase [Bacillus clausii KSM-K16]
Length = 419
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 6/208 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ P +V ++
Sbjct: 101 IVASLMVEPKQEKWHEIVKRVEAVGVDGLELNFGCPHGMAERGMGSASGQVPALVEQQTV 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV-G 684
WV+ + P VKLTPNIT+IT A+AA +G AD +S INT++ L + D W +
Sbjct: 161 WVKEVARTPVIVKLTPNITDITATAEAAAQGGADAISLINTINSLAGVDID--TWQTIPN 218
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
L T+GG G A +P+ L + A+ P N PI GIGGI + A+QF+ GA V
Sbjct: 219 VDGLGTHGGYCGPAVKPIALHMLGDCAR-HPNVNIPISGIGGIATWQDAVQFLLMGASNV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLK 770
Q+C+A + F +V+D + GL L K
Sbjct: 278 QVCTAAMHHGFRIVEDLLDGLSAYLEEK 305
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV++++GQ+V R + + L+ QVVA IN D+CINC KC+++C D+ +Q I + +
Sbjct: 307 LASVQELVGQSVHRYSEWGNLNLNHQVVARINRDVCINCNKCHISCEDTAHQCIGRYTDE 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ A DEC GC LC SI+C
Sbjct: 367 NGAPYLKVDEDECVGCNLC------SIVC 389
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G+ PNPF LASAPPT + V+RAFE GWG AV KT + + N + R
Sbjct: 1 MADLISNLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIMNSTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G F NIELIS++
Sbjct: 58 F----AALHFNGKRVAGFNNIELISDR 80
>gi|312602354|ref|YP_004022199.1| dihydropyrimidine dehydrogenase [NADP+] subunit beta [Burkholderia
rhizoxinica HKI 454]
gi|312169668|emb|CBW76680.1| Dihydropyrimidine dehydrogenase [NADP+] beta subunit (EC 1.3.1.2)
[Burkholderia rhizoxinica HKI 454]
Length = 425
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ W + + E GADA+ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSMMVPCNEQAWKSILPQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ + ++P VKLTPNIT+I ++AAY G ADGVS INT++ ++++ + P P V
Sbjct: 163 WVKQASRLPCLVKLTPNITDIRLGSRAAYAGGADGVSLINTINSIVAVDLEQMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P PI G+GGI + A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPNTPGLPISGMGGISNWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D I GL +
Sbjct: 281 QVCTAAMHYGFRIVTDMIDGLSNWM 305
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G+ PNPF LASAPPT + V RAFE GWG AV KT L ++ NVS R
Sbjct: 1 MADLRCTIAGIASPNPFWLASAPPTDKAYNVNRAFEAGWGGAVWKTLGLDPHVI-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
G T+ + G NIELI+++
Sbjct: 60 Y--GATTYN--GQRIAGLNNIELITDR 82
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ +V G+AV VT++ L+ + + A I+ CI CG C++AC D+ +QAIT + +
Sbjct: 312 TLDEVRGRAVPNVTDWKYLNLQYDIKARIDQSKCIQCGLCHIACEDTAHQAITGYRDGRR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H + C GC LC+ +
Sbjct: 372 HFEVIDANCVGCNLCMHV 389
>gi|295681146|ref|YP_003609720.1| dihydroorotate dehydrogenase [Burkholderia sp. CCGE1002]
gi|295441041|gb|ADG20209.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1002]
Length = 426
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M N+ DW + + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 LIVSLMVPCNEHDWKWILPQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPN+T+I A+AA G ADGVS INT++ ++ + D P P V
Sbjct: 163 WVKEGTRLPCLVKLTPNVTDIRHGARAAMNGGADGVSLINTINSIVGVDLDLMAPLPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGGI A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAAKPIALHMVAEIARDPQTHGLPISGIGGISDWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D I GL +
Sbjct: 281 QVCTAAMHYGFRIVSDMIDGLSNWM 305
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G++ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGIQSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
TT R G NIELI+++
Sbjct: 60 -YGATTWR---GQRIAGLNNIELITDR 82
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S+ + G+AV VT++ L+ + A I+ D CI CG C++AC D+ +QAIT +
Sbjct: 312 SLDAIRGRAVPNVTDWQYLNLNYDIKARIDQDRCIQCGLCHIACEDTSHQAITATRDGKR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V C GC LC+ +
Sbjct: 372 HFEVVDANCVGCNLCMHV 389
>gi|381211303|ref|ZP_09918374.1| dihydropyrimidine dehydrogenase subunit B [Lentibacillus sp. Grbi]
gi|381211385|ref|ZP_09918456.1| dihydropyrimidine dehydrogenase subunit B [Lentibacillus sp. Grbi]
Length = 422
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M +D W E+ K+ + G D ELNL CPHGM ERGMG A GQ P++V +L
Sbjct: 101 IIASLMVEPQRDKWHEIVKRVQDVGVDGFELNLGCPHGMSERGMGSAVGQHPDLVEKSTL 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
+ + ++P KLTPNIT+IT A+AA G AD VS INT++ L+ + D NP P V
Sbjct: 161 YAKEVAEVPVITKLTPNITDITATARAAERGGADAVSMINTINSLIGVDLDTWNPTPNVN 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L + A+ N PI GIGGI + ++F+ G+ VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMIGECARQPDINIPISGIGGISTWQDTVEFMLMGSGGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F+++DD GL L
Sbjct: 279 VCTAAMHHGFSIIDDLTEGLSNYL 302
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS+ G++ PNP+ LASAPPT V+RAFE GWG AV KT + V NV+ R
Sbjct: 1 MADISINFAGIESPNPYWLASAPPTNTGYQVQRAFEAGWGGAVWKTLC---EPVLNVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G F NIEL+S++
Sbjct: 58 F----GAHHFNGQRVAGFNNIELVSDR 80
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---- 543
I SV +++G++V++ T+++ LD ++VA IN+D+CINC KC++AC D+ +Q I
Sbjct: 307 IASVSELVGKSVEKYTDWSNLDLNHRMVARINNDICINCNKCHIACEDTAHQCIDMLIDE 366
Query: 544 HPETHQAHVTDECTGCTLCLSILIASIMC 572
+ + DEC GC LC SI+C
Sbjct: 367 NGNDYLEVREDECVGCNLC------SIVC 389
>gi|407771135|ref|ZP_11118497.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407285854|gb|EKF11348.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 425
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 5/206 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I S+M + W +L+++ ++ +ELNL CPHGM ERGMG A GQ PEMV ++
Sbjct: 102 VIIGSMMAPIEERAWKDLAQQIAESDVHGIELNLGCPHGMCERGMGSAIGQVPEMVEQVT 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
WV+ +V IP F KLTPNITNI A+AA +G AD VS INTV+ ++S+ D P P V
Sbjct: 162 RWVKDAVDIPVFTKLTPNITNILWSAEAALKGGADAVSLINTVNSIISVDLDSMVPEPMV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+GG G+A +P+ L V+ IA+ + I GIGGI + A++F+ G++A
Sbjct: 222 DGKG--THGGYCGSAVKPIALNMVAEIARTPETRDLHISGIGGITTWKDAVEFMALGSNA 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A F VVDD I G+ +
Sbjct: 280 VQVCTAAMIYGFRVVDDLIDGMSQWM 305
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFH--PET 547
SV+ AV +V N+ EL+ A+IN D CI CG+C++AC D+ +QAI + +
Sbjct: 312 SVEQFTRAAVPQVANWNELNMNFDTKAVINPDNCIECGRCHIACEDTSHQAIAMNVKEDG 371
Query: 548 HQAHVT--DECTGCTLCLSI 565
H+ V +EC GC LC I
Sbjct: 372 HREFVVIDEECVGCNLCYHI 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S +I G+ NPF LASAPPT V RAFE GWG V KT + +V NVS R
Sbjct: 1 MADLSCKIAGINSLNPFWLASAPPTDKKYNVVRAFEAGWGGVVWKTLGIDPPVV-NVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
+R L G NIELIS++
Sbjct: 60 YGAHHDQNRRLLG-----INNIELISDR 82
>gi|395646708|ref|ZP_10434568.1| dihydroorotate dehydrogenase family protein [Methanofollis
liminatans DSM 4140]
gi|395443448|gb|EJG08205.1| dihydroorotate dehydrogenase family protein [Methanofollis
liminatans DSM 4140]
Length = 400
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 134/213 (62%), Gaps = 6/213 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM + + +W +L+ AGADA+ELN+SCPHGM ERG+G A GQ P +VR ++
Sbjct: 107 VLIASIMASPDPAEWRDLASAVVDAGADAVELNVSCPHGMPERGVGAALGQHPHLVRGVT 166
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR +V++P VKLTPN+T+I +A+AA G AD ++AINTV LM + D P P+V
Sbjct: 167 HAVRDAVEVPLVVKLTPNVTDILPVAEAAVAGGADILAAINTVQCLMGIDLDTLEPLPSV 226
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
TYGG SG A +P+GL+ VS IA+ P PI+G+GG+ A ++I GA AVQ
Sbjct: 227 AGAG--TYGGYSGPAVKPIGLRIVSQIARELP-VPIMGVGGVSRWQDAAEYIAVGASAVQ 283
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKG 776
+C+AV + +V GL YL L G
Sbjct: 284 VCTAVMWRGAGIVRGMNEGLAG--YLAERGLSG 314
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 28/148 (18%)
Query: 355 LKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV--KGTTSR 412
L NPF LAS PPT + +R AF GWG AVTKT +T+VSPR KG +
Sbjct: 15 LSLDNPFILASGPPTASGDQIRHAFRLGWGGAVTKTIVPDSMEITDVSPRFAAWKGEDTG 74
Query: 413 HLYGPEQGSFLNIELISEKTAFIFFFLFQAI----------------PNFGEYKKIRENL 456
L F NIEL+S++ + AI P+ E++ + +
Sbjct: 75 LL------GFENIELLSKRDLACWTGEIAAIKKEYPDRVLIASIMASPDPAEWRDLASAV 128
Query: 457 I-TELNLKKLNSDGVSLQNGLPKRQINT 483
+ + +LN VS +G+P+R +
Sbjct: 129 VDAGADAVELN---VSCPHGMPERGVGA 153
>gi|433462002|ref|ZP_20419598.1| dihydropyrimidine dehydrogenase subunit B [Halobacillus sp.
BAB-2008]
gi|432189446|gb|ELK46553.1| dihydropyrimidine dehydrogenase subunit B [Halobacillus sp.
BAB-2008]
Length = 428
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V ++
Sbjct: 101 IIASLMVEPTQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTM 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D W P
Sbjct: 161 WAKEVAQTPVIVKLTPNITDITFTAQAAVNGGADAVSMINTINSLAGVDID--TWDTIPN 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAH 740
V K +GG G A +P+ L V+ A+ P N PI G+GG+ S A++F+ GA
Sbjct: 219 VAGKG--AHGGYCGPAVKPIALNMVAECAR-HPKINVPISGMGGVSSWREAVEFMLMGAT 275
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A + F++V+D I GL L
Sbjct: 276 GVQVCTAAMHHGFSIVEDMIDGLNNYL 302
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ +++ G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NVS R
Sbjct: 1 MADLRLDLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ + G + F NIELI+++
Sbjct: 58 F----AAVNFNGKKVAGFNNIELITDR 80
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
+ I SV D++G++V + +++ LD Q+VA IN+D+CINC KC++AC D+ +Q I
Sbjct: 305 KNIDSVMDLVGKSVGKYSDWGNLDLNHQIVAKINNDVCINCNKCHIACEDTSHQCIDMLK 364
Query: 546 ETHQAHV----TDECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 365 DEGGNDILRVREEDCVGCNLC------SIVC 389
>gi|317128027|ref|YP_004094309.1| dihydroorotate dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315472975|gb|ADU29578.1| dihydroorotate dehydrogenase family protein [Bacillus
cellulosilyticus DSM 2522]
Length = 422
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 138/261 (52%), Gaps = 27/261 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M ++ W E+ K+ E G D LELN CPHGM ERGMG A GQ PE+V +
Sbjct: 101 IVASLMVEPQQEKWHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ P VKLTPNIT+IT A+AA G AD VS INT++ L + D N P V
Sbjct: 161 WVKEVATTPVIVKLTPNITDITVTAEAAVRGGADAVSMINTINSLAGVDIDTWNTIPNVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V+ A+ N PI GIGGI + ++++ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECARNPLVNVPISGIGGISNWKDTVEYLLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+C+A + F +V+D I GL L +KG A D GK+
Sbjct: 279 VCTAAMHHGFRIVEDMIEGLSNYL-------------------DEKGISA--VMDLVGKS 317
Query: 804 IPNFGEYKKIREN--LITELN 822
+P + E+ + N ++ ++N
Sbjct: 318 VPKYSEWGNLDLNYKVVAQIN 338
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G+K PNPF LASAPPT + V+RAFE GWG AV KT D + N + R
Sbjct: 1 MADLQINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPIINTTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ + G F NIELI+++
Sbjct: 58 F----AAVNFNGQRVAGFNNIELITDR 80
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I +V D++G++V + + + LD +VVA IN+D+CINC KC++AC D+ +Q I +
Sbjct: 307 ISAVMDLVGKSVPKYSEWGNLDLNYKVVAQINNDVCINCNKCHIACEDASHQCIDMLKDA 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ ++C GC LC SI+C
Sbjct: 367 NGTAYLKVREEDCVGCNLC------SIVC 389
>gi|295706514|ref|YP_003599589.1| dihydroorotate dehydrogenase [Bacillus megaterium DSM 319]
gi|294804173|gb|ADF41239.1| dihydroorotate dehydrogenase [Bacillus megaterium DSM 319]
Length = 426
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P++V +
Sbjct: 101 IIASLMVEPQQEKWHEIVKKVEDVGVDGLELNFGCPHGMAERGMGAASGQVPDLVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D + W P
Sbjct: 161 WAKEVAQTPVIVKLTPNITDITVTAEAAVRGGADAVSMINTINSLAGV--DIHSWNTIPH 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHA 741
V K +GG G A +P+ L V+ A+ F N PI G+GG+ + A++F+ GA
Sbjct: 219 VAGKG--AHGGYCGPAVKPIALNMVAECARSPFINVPISGMGGVSNWQEAVEFMLMGATG 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A + F +V+D I GL L
Sbjct: 277 VQVCTAAMHHGFRIVEDMIQGLNYYL 302
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ + G++ PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLTTNLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVGFNGQRVAGFNNIELITDR 80
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---- 543
I V D++G+AV + +++ LD +VVA I+ D CINC KC+++C D+ +Q I
Sbjct: 307 IEKVSDIVGKAVSKYSDWGNLDLNYKVVARIDPDTCINCNKCHISCEDTSHQCIDMLKDP 366
Query: 544 HPETHQAHVTDECTGCTLCLSILIASIMC 572
+++ ++C GC LC SI+C
Sbjct: 367 SGKSYLKVREEDCVGCNLC------SIVC 389
>gi|442770407|gb|AGC71123.1| dihydropyrimidine dehydrogenase [NADP+] [uncultured bacterium
A1Q1_fos_18]
Length = 428
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 122/203 (60%), Gaps = 4/203 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W ++ ++ E AGAD LELN CPHGM ERGMG A GQ P+ I
Sbjct: 101 LIVSLMVESKRETWHDIVRRAEDAGADGLELNFGCPHGMSERGMGSAVGQVPDYTCQIVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ K P VKLTPNIT++T A+AA +G AD VS INT++ + + + P P+V
Sbjct: 161 WVKEVAKTPVIVKLTPNITDVTFPARAAEKGGADAVSLINTINSVTGIDLETLTPRPSV- 219
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ +GG G A +P+ L V+S+A+ PI GIGGI S A++FI G+ VQ+
Sbjct: 220 -HGASAHGGYCGPAVKPIALSMVASVAQTV-KIPISGIGGIASWQDAVEFILLGSSTVQV 277
Query: 745 CSAVQNQDFTVVDDYITGLQTLL 767
C+AV + F +V D I GL L
Sbjct: 278 CTAVMHHGFRIVLDMIDGLSAYL 300
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+SV+ CG+K PNPF LASAPPT + RAF+ GWG AV KT + NVS R
Sbjct: 1 MADLSVDFCGIKSPNPFWLASAPPTNTGDQIMRAFDAGWGGAVWKTLG---QPIVNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+S G NIELI+++
Sbjct: 58 Y----SSVDFAGRRMMGLNNIELITDR 80
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV++++G +V R + +L+ +V+A I D CI CG CY AC D +QAI P
Sbjct: 307 SVQELVGLSVPRYQRWEQLNLNYRVIADIKQDKCIGCGVCYAACYDGAHQAIAVKPNDRG 366
Query: 550 AHVTD----ECTGCTLC 562
+ +C GC LC
Sbjct: 367 RSTVEILEHKCVGCNLC 383
>gi|311031550|ref|ZP_07709640.1| dihydropyrimidine dehydrogenase [Bacillus sp. m3-13]
Length = 428
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P++V +
Sbjct: 101 VIASLMVEPKQEKWHEIVKKVEAVGVDGLELNFGCPHGMAERGMGSASGQVPDLVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D N P VG
Sbjct: 161 WAKEAANTPVIVKLTPNITDITVTAEAAVRGGADAVSMINTINSLAGVDLDSWNTIPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V A+ N PI G+GG+ + A++F+ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVGECARNPRINVPISGMGGVSNWQNAVEFMLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
IC+A + F +V+D + GL L
Sbjct: 279 ICTAAMHHGFRIVEDMLDGLNNYL 302
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLSINLAGIKAPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPIINVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVAGFNNIELITDR 80
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---- 543
I V D++G++V + +++ LD ++VA IN D CINC KC++AC D+ +Q I
Sbjct: 307 IARVMDLVGKSVPKYSDWGNLDLNYKIVARINQDTCINCNKCHIACEDTSHQCIDMLKNS 366
Query: 544 HPETHQAHVTDECTGCTLCLSILIASIMC 572
+++ ++C GC LC SI+C
Sbjct: 367 SGKSYLQVREEDCVGCNLC------SIVC 389
>gi|294501167|ref|YP_003564867.1| dihydroorotate dehydrogenase [Bacillus megaterium QM B1551]
gi|294351104|gb|ADE71433.1| dihydroorotate dehydrogenase [Bacillus megaterium QM B1551]
Length = 426
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P++V +
Sbjct: 101 IIASLMVEPQQEKWHEIVKKVEDVGVDGLELNFGCPHGMAERGMGAASGQVPDLVEKQTH 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D + W P
Sbjct: 161 WAKEVAQTPVIVKLTPNITDITVTAEAAVRGGADAVSMINTINSLAGV--DIHSWNTIPH 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHA 741
V K +GG G A +P+ L V+ A+ F N PI G+GG+ + A++F+ GA
Sbjct: 219 VAGKG--AHGGYCGPAVKPIALNMVAECARSPFINVPISGMGGVSNWQEAVEFMLMGATG 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A + F +V+D I GL L
Sbjct: 277 VQVCTAAMHHGFRIVEDMIQGLNYYL 302
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ + G++ PNPF LASAPPT + V+RAFE GWG AV KT D + NVS R
Sbjct: 1 MADLTTNLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---DPILNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVGFNGQRVAGFNNIELITDR 80
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---- 543
I V D++G+AV + +++ LD +VVA I+ D CINC KC+++C D+ +Q I
Sbjct: 307 IEKVSDIVGKAVSKYSDWGNLDLNYKVVARIDPDTCINCNKCHISCEDTSHQCIDMLKDP 366
Query: 544 HPETHQAHVTDECTGCTLCLSILIASIMC 572
+++ ++C GC LC SI+C
Sbjct: 367 SGKSYLKVREEDCVGCNLC------SIVC 389
>gi|209515499|ref|ZP_03264364.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. H160]
gi|209503966|gb|EEA03957.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. H160]
Length = 426
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M + DW + + E GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 103 LIVSLMVPCTEHDWKWILPQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPN+T+I A+AA +G ADGVS INT++ ++ + D P P V
Sbjct: 163 WVKEGTRLPCLVKLTPNVTDIRHGARAAMKGGADGVSLINTINSIVGVDLDVMAPLPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGGI A +FI GA +V
Sbjct: 223 GKG--THGGYCGPAAKPIALHMVAEIARDPQTHGLPISGIGGISDWRDAAEFIVLGAGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V D I GL +
Sbjct: 281 QVCTAAMHYGFRIVSDMIDGLSNWM 305
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G++ PNPF LASAPPT + V RAFE GWG V KT L +V NVS R
Sbjct: 1 MADLRCTIAGIQSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDPHVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
TT R G NIELI+++
Sbjct: 60 -YGATTWR---GQRIAGLNNIELITDR 82
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF--HPET 547
S+ + G+AV VT++ L+ + A I+ + CI CG C++AC D+ +QAIT +
Sbjct: 312 SLDAIRGRAVPNVTDWQYLNLNYDIKARIDQERCIQCGLCHIACEDTSHQAITATRDGQR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
H V C GC LC+ +
Sbjct: 372 HFEVVDANCVGCNLCMHV 389
>gi|162147298|ref|YP_001601759.1| dihydropyrimidine dehydrogenase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785875|emb|CAP55446.1| Dihydroorotate dehydrogenase [Gluconacetobacter diazotrophicus PAl
5]
Length = 426
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 26/257 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E GAD +ELN CPHGM ER MG A GQ P+ V ++
Sbjct: 103 IVVSLMVPCVEESWRRILPLVEDTGADGIELNFGCPHGMSERNMGSAVGQVPDYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ + ++P VKLTPNITNI A+AA G AD VS INT+ ++++ D P P V
Sbjct: 163 WVKQNTRMPTIVKLTPNITNILVPARAALRGGADAVSLINTIQSVVAVDLDAMAPMPVV- 221
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
L T+GG G A +P+ L+ V IA+ PI GIGGI + A +F+ GA V
Sbjct: 222 -DGLGTHGGYCGPAVKPIALRMVGEIARSPDMSGLPISGIGGISTWRDAAEFLVMGATNV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V+D I GL + QKG A D G+
Sbjct: 281 QVCTAAMHHGFRIVEDMIDGLSNWM-------------------DQKGFAA--LSDVIGR 319
Query: 803 AIPNFGEYKKIRENLIT 819
A+PNF + ++ N T
Sbjct: 320 AVPNFVNWNQLNLNFRT 336
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
++ DVIG+AV N+ +L+ + +A I+ + CI CG C++AC D+ +QAI
Sbjct: 312 ALSDVIGRAVPNFVNWNQLNLNFRTIAKIDQESCIQCGLCHIACEDTSHQAIARTRVEGR 371
Query: 547 THQAHVTDECTGCTLCLSI 565
H A + + C GC LC +
Sbjct: 372 RHYAVIDEACVGCNLCAHV 390
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G++ PNPF LASAPPT VRR E GWG V KT + V NVS R
Sbjct: 1 MADLRSTLAGIRSPNPFWLASAPPTDKEYNVRRGLEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLI---TELN 461
+ + G NIELIS++ + +++ + I +L+ E +
Sbjct: 60 Y----GAFNYNGNRLVGLNNIELISDRPLAVNLAEIKSVKRDYPDRAIVVSLMVPCVEES 115
Query: 462 LKKL-------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DG+ L G P +S ++ +G AV +V +Y E+
Sbjct: 116 WRRILPLVEDTGADGIELNFGCPHG---------MSERN-MGSAVGQVPDYVEM 159
>gi|384136675|ref|YP_005519389.1| dihydroorotate dehydrogenase family protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339290760|gb|AEJ44870.1| dihydroorotate dehydrogenase family protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 386
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 25/244 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++AS+M +K W E +K E G D +ELN CPHGM ERGMG A GQ P+++ +
Sbjct: 102 VVASLMIEPDKKQWQEAVRKVEDVGVDGIELNFGCPHGMVERGMGAAVGQHPDLIERQTA 161
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
WV+S+ +P KLTPN+T+I A+AA G AD +S INTV+ ++ + D W P
Sbjct: 162 WVKSAATVPVIAKLTPNVTDIRASARAAVAGGADAISLINTVNSIIGV--DLKSWVPRPT 219
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
L T+GG G A +P+ L V+ AK PI GIGGI + A++F+ GA AVQ
Sbjct: 220 VAGLGTHGGYCGPAVKPIALYMVAECAKDDAVCVPISGIGGISTWQDAVEFLLLGASAVQ 279
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
+C+AV F +V+D + GL +L + G RD GKA
Sbjct: 280 VCTAVMQHGFRIVEDLVDGLNR--FLDENGIGG-------------------VRDIVGKA 318
Query: 804 IPNF 807
+PN+
Sbjct: 319 LPNY 322
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++VE+ G++ PNPF LASAPPT V RAFE GWG AV KT + + V NVS R
Sbjct: 1 MADLTVEMAGIRSPNPFWLASAPPTNTGFQVERAFEAGWGGAVWKTLTDRP--VRNVSSR 58
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ HL F NIELIS++
Sbjct: 59 F----GALHLEDKRMVGFNNIELISDR 81
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I V+D++G+A+ + LD +VVA I+ D CI C KCY+AC D+ +QAI P
Sbjct: 308 IGGVRDIVGKALPNYVPFGSLDLDHRVVASIDADRCIGCYKCYIACLDAAHQAIA--PGD 365
Query: 548 HQAHV----TDECTGCTL 561
+A V ++C GC +
Sbjct: 366 TEARVPSVFVEKCVGCNV 383
>gi|409400438|ref|ZP_11250508.1| dihydropyrimidine dehydrogenase subunit B [Acidocella sp. MX-AZ02]
gi|409130566|gb|EKN00322.1| dihydropyrimidine dehydrogenase subunit B [Acidocella sp. MX-AZ02]
Length = 423
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 1/202 (0%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ P+ V ++
Sbjct: 103 VVVSLMVPCEEESWKRILPLVEATGADGIELNFGCPHGMSERGMGAAVGQVPDYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
W + ++P VKLTPNIT+I A+AA G AD VS INT++ + + D N P
Sbjct: 163 WCKQYSRMPVIVKLTPNITDILKPAEAARRGGADAVSLINTITSITGVDLD-NMVPEPAV 221
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
L T+GG G A +P+ L+ V IA+ PI GIGGI S A +F+ GA +VQ+C
Sbjct: 222 DGLGTHGGYCGPAVKPIALRMVGEIARSLKGLPISGIGGISSWRDAAEFLALGAGSVQVC 281
Query: 746 SAVQNQDFTVVDDYITGLQTLL 767
+A + F +V+D I+GL +
Sbjct: 282 TAAMHYGFRIVEDMISGLSNWM 303
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ ++ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NVS R
Sbjct: 1 MADLHIDFAGIKAPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLIT---EL 460
G + L G NIELI+++ + + + + + +L+ E
Sbjct: 60 YGAIGYNGQRLMG-----MNNIELITDRPLHLNLDEIRTVKRNWPDRAVVVSLMVPCEEE 114
Query: 461 NLKKL-------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+ K++ +DG+ L G P + +G AV +V +Y E+
Sbjct: 115 SWKRILPLVEATGADGIELNFGCPHGM----------SERGMGAAVGQVPDYVEM 159
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++DV G+AV+ ++ +L+ + +A I+ CI CG C++AC D+ +QAI ET +
Sbjct: 311 IEDVTGRAVKNFVHWNDLNLAWKTIASIDPTACIGCGLCHIACEDTAHQAIKLQ-ETGEK 369
Query: 551 H----VTDECTGCTLC 562
+ DEC GC LC
Sbjct: 370 RIYEVIDDECVGCNLC 385
>gi|168058192|ref|XP_001781094.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667491|gb|EDQ54120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YN+D W E+ ++ E+AG DA E+N SCPHGM ER MG+A GQD ++ +
Sbjct: 115 ILIASIMEEYNRDAWEEIIERVEEAGVDAFEINFSCPHGMPERKMGMAMGQDCSVLEEVC 174
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + IP + K+TPNIT+IT A+ A +GV+AINT+ +M ++ D P P V
Sbjct: 175 GWINAKATIPVWAKMTPNITDITQPARTALRSGCEGVAAINTIMSVMGINLDTLRPEPCV 234
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-FP-----ILGIGGIDSADVALQFIQA 737
+ +T GG S A RP+ L V SIA+M FP + GIGG++S A +FI
Sbjct: 235 --EGYSTPGGYSCKAVRPIALAKVMSIAQMMKTEFPGQDRSLSGIGGVESGSHAAEFILL 292
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA VQ+C+ V + V T LQ +
Sbjct: 293 GASTVQVCTGVMLHGYGHVKTMCTELQAFM 322
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLKF NPF + S PP T ++++RAFE GWG + KT SL V NV+PR
Sbjct: 10 DLSVTVNGLKFANPFVIGSGPPGTNYTVMKRAFEEGWGGVIAKTVSLDSSKVVNVTPRYA 69
Query: 407 KGTTSRHL-YGPEQGSFLNIELISEK 431
+ S PE + NIELIS++
Sbjct: 70 RLKASGAPGTKPEVIGWQNIELISDR 95
>gi|159043912|ref|YP_001532706.1| dihydropyrimidine dehydrogenase [Dinoroseobacter shibae DFL 12]
gi|157911672|gb|ABV93105.1| dihydroorotate dehydrogenase family protein [Dinoroseobacter shibae
DFL 12]
Length = 432
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 141/263 (53%), Gaps = 27/263 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W ++ E+ GADA+ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 MVVSLMVPCEEDPWKKILPLVEETGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVAR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P VKLTPNIT+I A+AA+ G AD VS INT+S + S++ D +P P++
Sbjct: 164 WCKQHTRMPVIVKLTPNITDIRYPARAAHAGGADAVSLINTISSITSVNLDSFSPEPSID 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 224 GKG--SHGGYCGPAVKPIALNMVAEIARDAETAGMPISGIGGVTTWRDAAEFLALGAGNV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL L K L D G+
Sbjct: 282 QVCTAAMTYGFKVVQEMISGLSQYLDEKDMTLD----------------------DLIGR 319
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N +T+ + +
Sbjct: 320 ATPNVTDWQYLNLNYVTKARIDQ 342
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G+K PNPF LASAPPT VRRAFE GWG V KT +V PR
Sbjct: 1 MADLRSDFVGVKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGFDPHVVNVNGPR 60
Query: 405 I--VKGTTSRHLYGPEQGSFLNIELISEK 431
V G R L NIELI+++
Sbjct: 61 YGAVWGADRRLL------GLNNIELITDR 83
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
E +++ D+IG+A VT++ L+ A I+ D CI CG+CY AC D+ +QAI+
Sbjct: 308 EKDMTLDDLIGRATPNVTDWQYLNLNYVTKARIDQDSCIKCGRCYAACEDTSHQAISMSA 367
Query: 546 ETHQAHVTDECTGCTLCLSI 565
+ + EC C LC+++
Sbjct: 368 DRVFEVIDAECVACNLCVNV 387
>gi|146277498|ref|YP_001167657.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides ATCC
17025]
gi|145555739|gb|ABP70352.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Rhodobacter sphaeroides ATCC
17025]
Length = 434
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 142/263 (53%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M ++D W ++ + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVISLMVPCDEDSWKDILARIEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV++ ++P VKLTPN+T+I A+AA G AD VS INT++ + + D P P +
Sbjct: 165 WVKTHSRMPCIVKLTPNVTDIRKPAEAAKRGGADAVSLINTINSITGVDIDAFAPMPMID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A++F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETHGLPISGIGGVTTWRDAVEFMLLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV F +V++ I+GL + K + D G+
Sbjct: 283 QVCTAVMTYGFRIVEEMISGLSDYMDAKGFETTA---------------------DLVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLNLNYVTKAQIDQ 344
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
+ D++G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI P+
Sbjct: 314 TTADLVGRAVPNVTDWQYLNLNYVTKAQIDQDLCIKCGRCYAACEDTSHQAIAMSPDRIF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 SVKDEECVACNLCVDV 389
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ ++ + G++ PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MANLQSDFIGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN 461
R + G R L NIELI+++ + +++ + + +L+ +
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLEVNLREIKSVKRDYPDRALVISLMVPCD 114
Query: 462 ----------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
++ +DGV L G P + +G AV +V Y E+
Sbjct: 115 EDSWKDILARIEDTGADGVELNFGCPHGM----------AERGMGSAVGQVPEYIEM 161
>gi|209544343|ref|YP_002276572.1| dihydropyrimidine dehydrogenase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532020|gb|ACI51957.1| dihydroorotate dehydrogenase family protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 426
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 26/257 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E GAD +ELN CPHGM ER MG A GQ P+ V ++
Sbjct: 103 IVVSLMVPCVEESWRRILPLVEDTGADGIELNFGCPHGMSERNMGSAVGQVPDYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ + ++P VKLTPNITNI A+AA G AD VS INT+ ++++ D P P V
Sbjct: 163 WVKQNTRMPTIVKLTPNITNILVPARAALRGGADAVSLINTIQSVVAVDLDAMAPMPVV- 221
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
L T+GG G A +P+ L+ V IA+ PI GIGGI + A +F+ GA V
Sbjct: 222 -DGLGTHGGYCGPAVKPIALRMVGEIARSPDMSGLPISGIGGISTWRDAAEFLVMGATNV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +V+D I GL + QKG A D G+
Sbjct: 281 QVCTAAMHYGFRIVEDMIDGLSNWM-------------------DQKGFAA--LSDVIGR 319
Query: 803 AIPNFGEYKKIRENLIT 819
A+PNF + ++ N T
Sbjct: 320 AVPNFVNWNQLNLNFRT 336
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
++ DVIG+AV N+ +L+ + +A I+ + CI CG C++AC D+ +QAI
Sbjct: 312 ALSDVIGRAVPNFVNWNQLNLNFRTIAKIDQESCIQCGLCHIACEDTSHQAIARTRVEGR 371
Query: 547 THQAHVTDECTGCTLCLSI 565
H A + + C GC LC +
Sbjct: 372 RHYAVIDEACVGCNLCAHV 390
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G++ PNPF LASAPPT VRR E GWG V KT + V NVS R
Sbjct: 1 MADLRSTLAGIRSPNPFWLASAPPTDKEYNVRRGLEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLI---TELN 461
+ + G NIELI+++ + +++ + I +L+ E +
Sbjct: 60 Y----GAFNYNGNRLVGLNNIELITDRPLAVNLAEIKSVKRDYPDRAIVVSLMVPCVEES 115
Query: 462 LKKL-------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DG+ L G P +S ++ +G AV +V +Y E+
Sbjct: 116 WRRILPLVEDTGADGIELNFGCPHG---------MSERN-MGSAVGQVPDYVEM 159
>gi|307944819|ref|ZP_07660157.1| dihydropyrimidine dehydrogenase [NADP+] [Roseibium sp. TrichSKD4]
gi|307772033|gb|EFO31256.1| dihydropyrimidine dehydrogenase [NADP+] [Roseibium sp. TrichSKD4]
Length = 437
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M + +W+ + KK E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 MVVSLMVPCEEQNWINILKKVEDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P VKLTPNIT+I A+AA+ G AD VS INT++ ++ + D P P +
Sbjct: 164 WCKQHTRMPVIVKLTPNITDIRKPAQAAHAGGADAVSLINTINSIVGVDLDAMAPSPTID 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA +V
Sbjct: 224 GKG--AHGGYCGPAVKPIALNMVAEIARDPTTHGLPISGIGGVTTWRDAAEFMALGAGSV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV D I GL W +S T V Q GK
Sbjct: 282 QVCTAAMTYGFKVVQDMIDGLSD-----------WMDRSGYTSVDQ----------FVGK 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 321 AVPNCSDWQHLNLNYIAKAKIDQ 343
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
SV +G+AV +++ L+ A I+ D+CI CG+C++AC D+ +QAIT +
Sbjct: 313 SVDQFVGKAVPNCSDWQHLNLNYIAKAKIDQDLCIKCGRCHIACEDTSHQAITNLVNGVR 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 373 HFEVIDEECVGCNLCVNV 390
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ GLK PNPF LASAPPT + V RAFE GWG V KT +V PR
Sbjct: 1 MADLRTNFIGLKSPNPFWLASAPPTDKAYNVIRAFEAGWGGVVWKTLGEDPPVVNVNGPR 60
Query: 405 I--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLIT---E 459
+ G R L G NIELI+++ + + + + + +L+ E
Sbjct: 61 YGAIHG-KDRQLLG-----LNNIELITDRPLDVNLQEIKQVKRDWPDRAMVVSLMVPCEE 114
Query: 460 LN----LKKL---NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
N LKK+ +DGV L G P +S + +G AV +V Y E+
Sbjct: 115 QNWINILKKVEDTGADGVELNFGCPHG---------MSERG-MGSAVGQVPEYIEM 160
>gi|384920879|ref|ZP_10020876.1| dihydropyrimidine dehydrogenase [Citreicella sp. 357]
gi|384465218|gb|EIE49766.1| dihydropyrimidine dehydrogenase [Citreicella sp. 357]
Length = 434
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 138/259 (53%), Gaps = 29/259 (11%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W + + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 VVVSLMVPCTEDAWKAILPQVEDTGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P P +
Sbjct: 165 WVKQHSRMPCIVKLTPNITDIRAPARAAHAGGADAVSLINTINSITSVDLDLFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK---MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K +GG+ G A +P+ L VS IA+ M+ P+ GIGG+ + A +F+ GA
Sbjct: 225 GKG--AHGGLCGPAVKPIALNMVSEIARSPDMY-GLPVSGIGGVTTWKDAAEFMALGAGN 281
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
VQ+C+A F VV + I+GL L K L D G
Sbjct: 282 VQVCTAAMTYGFKVVQEMISGLAQYLDEKGLALD----------------------DLVG 319
Query: 802 KAIPNFGEYKKIRENLITE 820
+A+PN +++ + N IT+
Sbjct: 320 RAVPNVSDWQHLNLNYITK 338
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
E L++ D++G+AV V+++ L+ A+I+ D CI+CG+CY AC D+ +QAI
Sbjct: 309 EKGLALDDLVGRAVPNVSDWQHLNLNYITKAVIDQDACISCGRCYAACEDTSHQAIDMSE 368
Query: 546 ETHQAHVTDECTGCTLCLSI 565
+ DEC C LC+++
Sbjct: 369 DRVFTVKDDECVACNLCVNV 388
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ G+K PNPF LASAPPT VRRAFE GWG V KT V NV+ P
Sbjct: 1 MADLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLI---T 458
R V G R L + NIELI+++ + +++ + + +L+ T
Sbjct: 61 RYGAVWGADRRLL------ALNNIELITDRPLEVNLREIKSVKRDYPDRAVVVSLMVPCT 114
Query: 459 ELNLKKL-------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
E K + +DGV L G P + +G AV +V Y E+
Sbjct: 115 EDAWKAILPQVEDTGADGVELNFGCPHGM----------SERGMGAAVGQVPEYIEM 161
>gi|386713946|ref|YP_006180269.1| dihydropyrimidine dehydrogenase [Halobacillus halophilus DSM 2266]
gi|384073502|emb|CCG44995.1| dihydropyrimidine dehydrogenase [Halobacillus halophilus DSM 2266]
Length = 428
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E+ G D LELN CPHGM ERGMG A GQ PE+V ++
Sbjct: 101 IIASLMVEPTQEKWHEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTM 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW---PA 682
W + + P VKLTPNIT+IT A+AA G AD VS INT++ L + D W P
Sbjct: 161 WAKEVAETPVIVKLTPNITDITFTAQAAVNGGADAVSMINTINSLAGVDID--TWDTIPN 218
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAH 740
V K +GG G A +P+ L V+ A+ P N PI G+GG+ S A++F+ GA
Sbjct: 219 VAGKG--AHGGYCGPAVKPIALNMVAECAR-HPKINVPISGMGGVSSWREAVEFMLMGAT 275
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A + F++V+D GL L
Sbjct: 276 GVQVCTAAMHHGFSIVEDMNDGLNNYL 302
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV D++G++V++ +++ LD Q+VA IN+D+CINC KC++AC D+ +Q I +
Sbjct: 307 IDSVMDLVGKSVEKYSDWGNLDLNHQIVAKINNDVCINCNKCHIACEDTSHQCIDMLKDE 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ ++C GC LC SI+C
Sbjct: 367 DGNDILRVREEDCVGCNLC------SIVC 389
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G+K PNPF LASAPPT + V+RAFE GWG AV KT + + NV+ R
Sbjct: 1 MADLSLNLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPILNVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G + F NIELI+++
Sbjct: 58 F----AAVGFNGQKVAGFNNIELITDR 80
>gi|407798628|ref|ZP_11145535.1| dihydropyrimidine dehydrogenase [Oceaniovalibus guishaninsula
JLT2003]
gi|407059589|gb|EKE45518.1| dihydropyrimidine dehydrogenase [Oceaniovalibus guishaninsula
JLT2003]
Length = 432
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 142/263 (53%), Gaps = 27/263 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M + W ++ E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 MVVSLMVPCEEWAWKQILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPNIT++ A+AA G ADGVS INT+S + S++ D +P P++
Sbjct: 164 WCKQNTRMPVLVKLTPNITDVRYPARAAKAGGADGVSLINTISSITSVNLDDWSPEPSID 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGG+ + A +FI GA +V
Sbjct: 224 GKG--SHGGYCGPAVKPIALNMVAEIARDAETLGLPISGIGGVTTWRDAAEFIALGAGSV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ++GL L K L D G+
Sbjct: 282 QVCTAAMTYGFKIVQEMVSGLSQYLDEKGMSLD----------------------DLRGR 319
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 320 AVPNVTDWRYLNLNYVTKARIDQ 342
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
E +S+ D+ G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI P
Sbjct: 308 EKGMSLDDLRGRAVPNVTDWRYLNLNYVTKARIDQDLCIKCGRCYAACEDTSHQAIGIGP 367
Query: 546 ETHQAHVTDECTGCTLCLSI 565
+ EC C LC+++
Sbjct: 368 GRTFEVIDAECVACNLCVNV 387
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G++ PNPF LASAPPT V RAF GWG V KT L +V PR
Sbjct: 1 MADLATNFVGIRSPNPFWLASAPPTDKEYNVVRAFRAGWGGVVWKTLGLDPHIVNVNGPR 60
Query: 405 --IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+V G R L NIELI+++ + N E KK++ +
Sbjct: 61 YGVVYGADRRVL------GLNNIELITDRPLDV---------NLREIKKVKRD 98
>gi|148257287|ref|YP_001241872.1| dihydropyrimidine dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146409460|gb|ABQ37966.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Bradyrhizobium sp. BTAi1]
Length = 441
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 142/263 (53%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M + +W + K+ E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 VVVSLMVPCQEPNWTAIIKRVEQTGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W +++ ++P VKLTPN+ +I A+AA G AD VS INTV+ LM + D PWP +
Sbjct: 164 WCKAATRMPVIVKLTPNVASILPPAEAAKRGGADAVSLINTVNALMGVDIDQMAPWPHI- 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+GG+ G+ +P+ L VS+IA+ PI GIGGI+ A +F+ GA V
Sbjct: 223 -DGYGTHGGMCGSVVKPIALNMVSAIARHPATQGLPISGIGGIEKWRDAAEFMALGAVNV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ I GL + QKG + D G+
Sbjct: 282 QVCTAAMVYGFKIVEEMIAGLSEWM-------------------DQKGY--ARPEDFVGR 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+P E++ + + + + ++ +
Sbjct: 321 AVPRKTEWQHLNLDYVVKAHIDQ 343
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 492 KDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF--HPETHQ 549
+D +G+AV R T + L+ V A I+ D+CI CG+C++ C D+ +QAI+ + H
Sbjct: 315 EDFVGRAVPRKTEWQHLNLDYVVKAHIDQDLCIKCGRCHIGCEDTSHQAISSLKDGQRHF 374
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC GC LC +
Sbjct: 375 EVIEEECVGCNLCAVV 390
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+ PNPF LASAPPT + V RAF+ GWG V KT +V PR
Sbjct: 1 MADLRTSFAGITSPNPFWLASAPPTDKAYNVVRAFKAGWGGVVWKTLGEDPPIVNVSGPR 60
Query: 405 I--VKGTTSRHLYGPEQGSFLNIELISEK 431
+ G+ R + F NIELI+++
Sbjct: 61 YGAIHGSDRRVI------GFNNIELITDR 83
>gi|288962204|ref|YP_003452499.1| dihydropyrimidine dehydrogenase (NADP+) [Azospirillum sp. B510]
gi|288914470|dbj|BAI75955.1| dihydropyrimidine dehydrogenase (NADP+) [Azospirillum sp. B510]
Length = 427
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 125/206 (60%), Gaps = 6/206 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ S+M T + W L+++ + GA D LELNL CPHGM ERGMG A GQ PEMV ++
Sbjct: 103 MVVSLMATMTEAAWAGLARRVAETGAADGLELNLGCPHGMCERGMGSAIGQVPEMVEQVT 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+++V +P VKLTPNITNI A+AA G AD +S INTV+ ++++ D P P V
Sbjct: 163 RWVKNAVNLPVIVKLTPNITNILWSAEAAKRGGADAISLINTVNSIVAVDLDAMAPTPVV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++GG G A +P+ L V+ IA+ P+ GIGGI + A +F+ GA
Sbjct: 223 DGKG--SHGGYCGPAVKPIALNMVAEIARNPDTSGLPVSGIGGITTWRDAAEFLALGATN 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A F +V+D I GL +
Sbjct: 281 VQVCTAAMTYGFKIVEDMIGGLSNWM 306
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G++ PNPF LASAPPT + V RAF+ GWG V KT + V NVS R
Sbjct: 1 MADLRSTIAGIRSPNPFWLASAPPTDKAYNVVRAFKAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
T R + G F NIELIS++
Sbjct: 60 YGAHLDTDRRMIG-----FNNIELISDR 82
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF-HPETH 548
++ ++ G+AV+ V N+ +L+ A+I+ +CI+CG+C++ C D+ +QAI E
Sbjct: 313 TLDELSGRAVRNVVNWNDLNMNFSTKAVIDPALCIDCGRCHVVCEDTSHQAIRIDQGEGR 372
Query: 549 QAH--VTDECTGCTLC 562
+ V +EC GC LC
Sbjct: 373 RVFTVVDEECVGCNLC 388
>gi|375006680|ref|YP_004975464.1| putative dihydroorotate dehydrogenase [Azospirillum lipoferum 4B]
gi|357427938|emb|CBS90887.1| putative dihydroorotate dehydrogenase [Azospirillum lipoferum 4B]
Length = 428
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 125/206 (60%), Gaps = 6/206 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ S+M T + W L+++ + GA D LELNL CPHGM ERGMG A GQ PEMV ++
Sbjct: 103 MVVSLMATMTETAWAGLARRIAETGAADGLELNLGCPHGMCERGMGSAIGQVPEMVEQVT 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+++V +P VKLTPNITNI A+AA G AD VS INTV+ ++++ D P P V
Sbjct: 163 RWVKNAVNLPVIVKLTPNITNILWSAEAARRGGADAVSLINTVNSIVAVDLDAMAPTPVV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++GG G A +P+ L V+ IA+ P+ GIGG+ + A +F+ GA
Sbjct: 223 DGKG--SHGGYCGPAVKPIALNMVAEIARNPETRGLPVSGIGGVTTWRDAAEFLALGATN 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+A F +V+D I GL +
Sbjct: 281 VQVCTAAMTYGFKIVEDMIGGLSNWM 306
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ I G++ PNPF LASAPPT + V RAF+ GWG V KT + V NVS R
Sbjct: 1 MADLRSTIAGIRSPNPFWLASAPPTDKLTNVVRAFKAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
T R + G NIELIS++
Sbjct: 60 YGAHLDTDRRMIG-----LNNIELISDR 82
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ ++ G+AV+ V N+ +L+ A+I+ +CI+CG+C++ C D+ +QAI +
Sbjct: 313 TLDELSGRAVRNVVNWNDLNMNFSTKAVIDPALCIDCGRCHIVCEDTSHQAIRIDAGEGR 372
Query: 550 ---AHVTDECTGCTLCLSI 565
V +EC GC LC I
Sbjct: 373 RVFTVVDEECVGCNLCSHI 391
>gi|85704751|ref|ZP_01035852.1| dihydropyrimidine dehydrogenase [Roseovarius sp. 217]
gi|85670569|gb|EAQ25429.1| dihydropyrimidine dehydrogenase [Roseovarius sp. 217]
Length = 434
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 140/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M N+D W E+ ++ E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 105 LIASLMVPVNEDAWREILQRVEDTGCDGVELNFGCPHGMSERGMGSAVGQVPEYVGQVAY 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + +P VKLTPNIT+I A+AA EG AD VS INT++ + S+ D P P +
Sbjct: 165 WCKKHSNLPVIVKLTPNITDIRKPAQAAKEGGADAVSLINTINSITSVDLDLFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GQG--AHGGYCGPAVKPIALNMVAEIARDPATAGLPISGIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + K T V Q G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSQYMDDKGF-----------TSVDQL----------VGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN +K + N +T+ K+N D
Sbjct: 322 AVPNVVNWKDLNLNYVTK---AKINQD 345
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV ++G+AV V N+ +L+ A IN D CINCG+CY AC D+ +QAI +
Sbjct: 314 SVDQLVGRAVPNVVNWKDLNLNYVTKAKINQDDCINCGRCYAACEDTSHQAIAMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+ PNPF LASAPPT VRRAFE GWG V KT V NV+
Sbjct: 1 MADLTTNFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEAGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN- 461
G +YG ++ NIELI+++ + + + + + +L+ +N
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEVNLKEMRRVKRDWPDRALIASLMVPVNE 115
Query: 462 ---------LKKLNSDGVSLQNGLPK 478
++ DGV L G P
Sbjct: 116 DAWREILQRVEDTGCDGVELNFGCPH 141
>gi|373858791|ref|ZP_09601525.1| dihydroorotate dehydrogenase family protein [Bacillus sp. 1NLA3E]
gi|372451383|gb|EHP24860.1| dihydroorotate dehydrogenase family protein [Bacillus sp. 1NLA3E]
Length = 430
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 117/204 (57%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M +D W E+ KK E G D LELN CPHGM ERGMG A GQ P +V +
Sbjct: 101 VIVSLMVEPKQDSWHEIVKKVEAVGVDGLELNFGCPHGMAERGMGSASGQVPALVEKQTY 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ K P VKLTPNIT+IT A+AA G AD +S INT++ L + D N P VG
Sbjct: 161 WVKEVAKTPVIVKLTPNITDITATAEAAERGGADCLSMINTINSLAGVDLDTWNTIPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM-FPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG G A +P+ L V A+ PI GIGGI + A++++ GA VQ
Sbjct: 221 GKG--AHGGYCGPAVKPIALHMVGECARNPRITIPISGIGGIANWQNAVEYLLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F +V+D I GL L
Sbjct: 279 VCTAAMHHGFRIVEDMIEGLNNYL 302
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV D++G++V + +++ +LD +VA IN D+CINC KC++AC D+ +Q I E
Sbjct: 307 IASVIDIVGKSVPKYSDWGDLDLNYNIVAKINTDVCINCNKCFIACEDTSHQCIEMLKSE 366
Query: 547 THQAHVT---DECTGCTLCLSILIASIMC 572
+ + ++C GC LC SI+C
Sbjct: 367 NGEGFLKVREEDCVGCNLC------SIVC 389
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G++ PNPF LASAPPT + V+RAFE GWG V KT + + N S R
Sbjct: 1 MADLRINVAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGVVWKTLG---EPIINTSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI+++
Sbjct: 58 F----AAVSFNGQRVVGFNNIELITDR 80
>gi|114766788|ref|ZP_01445722.1| dihydropyrimidine dehydrogenase [Pelagibaca bermudensis HTCC2601]
gi|114540982|gb|EAU44040.1| dihydropyrimidine dehydrogenase [Roseovarius sp. HTCC2601]
Length = 434
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 27/263 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASIMVPCTEEAWKAILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT+I A AA+ G AD VS INT++ + S+ D P P +
Sbjct: 165 WVKQYTRMPCIVKLTPNITDIRKPAMAAHAGGADAVSLINTINSITSVDLDLFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L VS IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--AHGGYCGPAVKPIALNMVSEIARSPEMRGLPISGIGGVTTWKDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL L K L D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSQYLDEKEISLS----------------------DLVGR 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +++ + +
Sbjct: 321 AVPNVSDWQHLNLNYVSKAKIDQ 343
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
E +S+ D++G+AV V+++ L+ A I+ ++CI+CG+CY AC D+ +QAI
Sbjct: 309 EKEISLSDLVGRAVPNVSDWQHLNLNYVSKAKIDQELCISCGRCYAACEDTSHQAIDMSE 368
Query: 546 ETHQAHVTDECTGCTLCLSI 565
+ DEC C LC+++
Sbjct: 369 DRVFTVKDDECVACNLCVNV 388
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ G+K PNPF LASAPPT VRRAFE GWG V KT Q V NV+ P
Sbjct: 1 MADLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEQGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIP-NFGEYKKIRENLI--T 458
R + G R L NIELI+++ + +++ ++ + I ++ T
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLEVNLREMKSVKRDYPDRALIASIMVPCT 114
Query: 459 ELNLKKL-------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
E K + +DGV L G P + +G AV +V Y E+
Sbjct: 115 EEAWKAILPLVEETGADGVELNFGCPHGM----------SERGMGSAVGQVPEYIEM 161
>gi|302761068|ref|XP_002963956.1| hypothetical protein SELMODRAFT_80950 [Selaginella moellendorffii]
gi|302769089|ref|XP_002967964.1| hypothetical protein SELMODRAFT_88846 [Selaginella moellendorffii]
gi|300164702|gb|EFJ31311.1| hypothetical protein SELMODRAFT_88846 [Selaginella moellendorffii]
gi|300167685|gb|EFJ34289.1| hypothetical protein SELMODRAFT_80950 [Selaginella moellendorffii]
Length = 411
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 127/210 (60%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI SIM Y+KD W E+ ++ E G DALE+N SCPHGM ER MG A G+D +++ +
Sbjct: 140 ILIGSIMEEYDKDAWEEIIERVEATGVDALEINFSCPHGMPERKMGAAVGKDCDLLGEVC 199
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPN+T+IT A+ A E +G+SAINT++ +M ++ D P P V
Sbjct: 200 SWINAKATVPVWAKMTPNVTDITQPARTAIEAGCEGLSAINTITSIMGINLDTLRPEPCV 259
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM----FP--NFPILGIGGIDSADVALQFIQA 737
+ +T GG S A RP+ L V +IA+M +P N + GIGG++S D A +FI
Sbjct: 260 --EGYSTPGGYSSRAVRPIALAKVMAIAQMLKSEYPDRNISLSGIGGVESGDNAAEFILL 317
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA+ VQ+C+ V + +V LQ +
Sbjct: 318 GANTVQVCTGVMMYGYPLVKRLCKELQAFM 347
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL+ PNPF + S PP T +++++AF+ GWG ++KT SL V NV+PR
Sbjct: 38 DLSVSVNGLRLPNPFVIGSGPPGTNYTVMKKAFDEGWGAVISKTLSLDSTKVINVTPRYA 97
Query: 407 KGTTSRHLYGPEQG-SFLNIELISEK 431
+ R GP+ + NIELIS++
Sbjct: 98 R---MRSGNGPKDVIGWENIELISDR 120
>gi|399992478|ref|YP_006572718.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657033|gb|AFO90999.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 434
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 141/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W ++ + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 IIVSLMVPCEEQAWKDILPRVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ ++S++ D P P +G
Sbjct: 165 WCKKYYSKPVIVKLTPNITDIRQPARAAKAGGADAVSLINTINSIVSVNLDAMAPEPTIG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI IGG+ + A +F+ GA V
Sbjct: 225 DKG--THGGYCGPAVKPIALNMVAEIARCPQTHGLPISAIGGVTTWRDAAEFMTMGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + KG+D Q D GK
Sbjct: 283 QVCTAAMTYGFNVVKEMISGLNQWM-----DDKGYD----------------QLDDFVGK 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN +++ + N I + K+N D
Sbjct: 322 AVPNVTDWQYLDLNYIAK---AKINQD 345
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTADFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D +G+AV VT++ LD A IN D CI CG+C+ AC D+ +QAI +
Sbjct: 315 LDDFVGKAVPNVTDWQYLDLNYIAKAKINQDDCIKCGRCFAACEDTSHQAIAMSEDRVFT 374
Query: 551 HVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 375 VKDDECVACNLCVNV 389
>gi|118592955|ref|ZP_01550343.1| dihydropyrimidine dehydrogenase [Stappia aggregata IAM 12614]
gi|118434489|gb|EAV41142.1| dihydropyrimidine dehydrogenase [Stappia aggregata IAM 12614]
Length = 437
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 28/264 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M + +W+++ KK E+ AD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 LVVSLMVPCEEQNWIDILKKVEETEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT++ A+AA G AD VS INT++ +M + D +P P+V
Sbjct: 164 WVKQHSRMPCIVKLTPNITDVRKPAQAAKAGGADAVSLINTINSIMGVDLDIMSPSPSVD 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA +V
Sbjct: 224 GKG--AHGGYCGPAVKPIALNMVAEIARDPATHGLPISGIGGVTTWRDAAEFMALGAGSV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDK-EG 801
Q+C+A F VV+D I GL + K Y D+ G
Sbjct: 282 QVCTAAMTYGFRVVEDMIEGLSDWMDTK----------------------GYTSVDQFVG 319
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 320 SAVPNVSDWQYLNLNYIAKAKIDQ 343
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV +G AV V+++ L+ A I+ D+CI CG+C++AC D+ +QAIT + +
Sbjct: 313 SVDQFVGSAVPNVSDWQYLNLNYIAKAKIDQDLCIECGRCHIACEDTSHQAITNMVDGVR 372
Query: 550 AH--VTDECTGCTLCLSI 565
+ +EC GC LC+++
Sbjct: 373 KFEVIDEECVGCNLCVNV 390
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 46/185 (24%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G+K PNPF LASAPPT V RAF+ GWG V KT +V PR
Sbjct: 1 MADLRTDFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLGEDPAVVNVNGPR 60
Query: 405 I--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LI 457
+ G R L G NIELI+++ + N E K+++ + L+
Sbjct: 61 YGAIHG-KDRQLIG-----LNNIELITDRPLEV---------NLREIKQVKRDWPDRALV 105
Query: 458 TELN-----------LKKL---NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503
L LKK+ +DGV L G P +S + +G AV +V
Sbjct: 106 VSLMVPCEEQNWIDILKKVEETEADGVELNFGCPHG---------MSERG-MGSAVGQVP 155
Query: 504 NYTEL 508
Y E+
Sbjct: 156 EYIEM 160
>gi|427429355|ref|ZP_18919390.1| Dihydropyrimidine dehydrogenase [Caenispirillum salinarum AK4]
gi|425880548|gb|EKV29244.1| Dihydropyrimidine dehydrogenase [Caenispirillum salinarum AK4]
Length = 426
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N++DW + E+ GAD +ELN CPHGM ERGMG A GQ PE V+ ++
Sbjct: 103 VIVSLMVPCNEEDWKYILPLVEETGADGVELNFGCPHGMSERGMGAAVGQVPEYVQMVTG 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ +P VKLTPNIT++ A+AA G ADGVS INT++ ++S+ D P P V
Sbjct: 163 WVKKYSSLPCLVKLTPNITDVRHPARAAKNGGADGVSLINTINSIVSVDLDVMAPTPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ P+ GIGGI + A ++I G +V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDPATHGLPMSGIGGISTWRDAAEYIALGCGSV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A + F +V+D I GL + K +
Sbjct: 281 QVCTAAMHHGFRIVEDMIDGLSNWMDAKGYR 311
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFH----P 545
+++D G AV VT++ +L+ + A I+DD CI CG C++AC D+ +QAI FH P
Sbjct: 312 TIEDFRGMAVGNVTDWNQLNMNYDIKARIDDDKCIKCGLCHIACEDTSHQAIRFHQGAEP 371
Query: 546 ETHQAHVTDE-CTGCTLCL 563
+ + V DE C GC LC+
Sbjct: 372 DDRKFEVVDEDCVGCNLCM 390
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S I G+K PNPF LASAPPT V RAF GWG V KT + +V NVS R
Sbjct: 1 MADLSCTIAGIKSPNPFWLASAPPTDKQYNVERAFRAGWGGVVWKTLGIDPPVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
+ G NIELI+++ + + + + +L+ N
Sbjct: 60 Y----GAIDYNGTRMAGLNNIELITDRPLAVNLAEIADVKKKWPDRAVIVSLMVPCNEED 115
Query: 462 -------LKKLNSDGVSLQNGLPK 478
+++ +DGV L G P
Sbjct: 116 WKYILPLVEETGADGVELNFGCPH 139
>gi|374311596|ref|YP_005058026.1| dihydroorotate dehydrogenase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753606|gb|AEU36996.1| dihydroorotate dehydrogenase family protein [Granulicella mallensis
MP5ACTX8]
Length = 471
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IAS+M ++ W ++ ++ E AGAD LELN CPHGM ERGMG A GQ PE I+
Sbjct: 100 VVIASLMVESKRETWHDIVQRAEDAGADGLELNFGCPHGMSERGMGSAVGQVPEYCEQIT 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+ + P VKLTPNI++I A+AA G AD +SAINT++ + S+ D P P V
Sbjct: 160 GWVKEKARTPVIVKLTPNISDIRIPARAAKRGGADALSAINTINSITSIDLDTLEPRPMV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI-AKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +++GG G A +P+ L V + + P+ GIGGI + A +FI G+ V
Sbjct: 220 DGK--SSHGGYCGPAVKPIALNMVQQVMSDPDAALPMSGIGGIGTWQDAAEFILLGSGTV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A + + +V+D GLQ+ + K +
Sbjct: 278 QVCTAAMHYGYRIVEDMADGLQSWMRRKGYE 308
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 354 GLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRH 413
G+K NPF LASAPPT + RAF+ GWG AV KT + +TNVS R +S
Sbjct: 10 GIKCLNPFWLASAPPTNCGEQIMRAFDAGWGGAVWKTIG---EPITNVSSRY----SSID 62
Query: 414 LYGPEQGSFLNIELISEK 431
G + F NIELIS++
Sbjct: 63 WNGQKMMGFNNIELISDR 80
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF 543
++ D G ++ +V + L+ +VVA I++ CI C CY AC D +Q I
Sbjct: 309 TLDDFRGLSLPKVREWKHLNLNYKVVARIHESKCIGCDLCYTACWDGAHQCIHL 362
>gi|259417001|ref|ZP_05740921.1| dihydroorotate dehydrogenase family protein [Silicibacter sp.
TrichCH4B]
gi|259348440|gb|EEW60217.1| dihydroorotate dehydrogenase family protein [Silicibacter sp.
TrichCH4B]
Length = 434
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 140/263 (53%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + + + G D +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 LIASIMVPCEEAAWKAILPRVAETGCDGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ D +P P +G
Sbjct: 165 WCKQYYDKPVIVKLTPNITDIRHPARAAHAGNADAVSLINTINSITSVNLDAMSPEPMIG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + V+ IA+ PI IGG+ + A +FI GA V
Sbjct: 225 GKG--THGGYCGPAVKPIAMNMVAEIARDPQTAGLPISAIGGVTTWRDAAEFIALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV++ I+GL + QKG + + D G
Sbjct: 283 QVCTAAMTYGFKVVEEMISGLSDWM-------------------DQKGYSSIE--DFRGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLDLNYVTKAKISQ 344
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G AV VT++ LD A I+ D CI CG+C+ AC D+ +QAI +
Sbjct: 314 SIEDFRGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCGRCFAACEDTSHQAIAMSADRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
>gi|163796768|ref|ZP_02190726.1| dihydropyrimidine dehydrogenase [alpha proteobacterium BAL199]
gi|159178022|gb|EDP62569.1| dihydropyrimidine dehydrogenase [alpha proteobacterium BAL199]
Length = 435
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 145/263 (55%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M + W ++ K+ + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 VVVSLMVPCEEACWTDIMKQVDDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV++S ++P VKLTPNIT+I A+AA++G AD VS INTVS + S++ D +P P++
Sbjct: 164 WVKASTRMPVIVKLTPNITDIRYPARAAHKGGADAVSLINTVSSITSVNLDTFSPEPSID 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 224 GKG--SHGGYCGPAVKPIALNMVADIARDAETRGLPISGIGGITTWRDAAEFMALGAGNV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I G LK W + + G P G+
Sbjct: 282 QVCTAAMTYGFKIVQEMIEG-----------LKNW--------MDEAGHP--DLDAFVGR 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 321 AVPNVTDWQYLNLNYVAKARIDQ 343
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI G+K PNPF LASAPPT V RAF+ GWG V KT L +V PR
Sbjct: 1 MADIRSNFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLGLDPHIVNVNGPR 60
Query: 405 I--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
V G R L NIELI+++ + N E K+++ +
Sbjct: 61 YGAVWGADRRLL------GLNNIELITDRPLQV---------NLDEIKRVKRD 98
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 495 IGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH--V 552
+G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT + + +
Sbjct: 318 VGRAVPNVTDWQYLNLNYVAKARIDQDSCIQCGRCHIACEDTSHQAITNMVDGQRRFEVI 377
Query: 553 TDECTGCTLCLSI 565
+EC GC LC+++
Sbjct: 378 DEECVGCNLCVNV 390
>gi|260429222|ref|ZP_05783199.1| dihydroorotate dehydrogenase family protein [Citreicella sp. SE45]
gi|260419845|gb|EEX13098.1| dihydroorotate dehydrogenase family protein [Citreicella sp. SE45]
Length = 434
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 136/263 (51%), Gaps = 27/263 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ASIM ++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVASIMVPCTEEAWKAILPLVEDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT+I A AA+ G AD VS INT++ + S+ D P P +
Sbjct: 165 WVKQYTRMPCIVKLTPNITDIRKPAMAAHAGGADAVSLINTINSITSVDLDLFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--AHGGYCGPAVKPIALNMVAEIARSPEMRGLPISGIGGVTTWKDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL L K L D G+
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSQYLDEKEIALS----------------------DLIGR 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I++ + +
Sbjct: 321 AVPNVSDWQHLNLNYISKARIDQ 343
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
E +++ D+IG+AV V+++ L+ A I+ D CI+CG+CY AC D+ +QAI
Sbjct: 309 EKEIALSDLIGRAVPNVSDWQHLNLNYISKARIDQDACISCGRCYAACEDTSHQAIDMSE 368
Query: 546 ETHQAHVTDECTGCTLCLSI 565
+ DEC C LC+++
Sbjct: 369 DRVFTVKDDECVACNLCVNV 388
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT VRRA+E GWG V KT + V NV+ P
Sbjct: 1 MADLSSNFIGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLI---T 458
R + G R L NIELI+++ + +++ + + +++ T
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLEVNLREMKSVKRDYPDRALVASIMVPCT 114
Query: 459 ELNLKKL-------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
E K + +DGV L G P + +G AV +V Y E+
Sbjct: 115 EEAWKAILPLVEDTGADGVELNFGCPHGM----------SERGMGSAVGQVPEYIEM 161
>gi|407785090|ref|ZP_11132238.1| dihydropyrimidine dehydrogenase subunit B [Celeribacter
baekdonensis B30]
gi|407203122|gb|EKE73109.1| dihydropyrimidine dehydrogenase subunit B [Celeribacter
baekdonensis B30]
Length = 433
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 137/258 (53%), Gaps = 26/258 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M + + W + + + G D ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASVMVPCDAESWKSIIPRIAETGCDGFELNFGCPHGMAERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + +P VKLTPNITNI A+AA G AD VS INT++ + S++ D P P +
Sbjct: 165 WCKEATGLPVIVKLTPNITNIILPAEAALRGGADAVSLINTINSITSVNLDSFAPEPMID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ N PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPATANLPISGIGGVTTWRDAAEFLALGASNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ I+GL + +KG + G+
Sbjct: 283 QVCTAAMTYGFKIVEEMISGLSQYM-------------------DEKG--FTSVAEISGR 321
Query: 803 AIPNFGEYKKIRENLITE 820
A+PN +++ + N +T+
Sbjct: 322 AVPNVTDWQYLNLNHVTK 339
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV ++ G+AV VT++ L+ A+IN D CINCG+CY AC D+ +QAI+ P+
Sbjct: 314 SVAEISGRAVPNVTDWQYLNLNHVTKAVINQDDCINCGRCYAACEDTSHQAISMSPDRVF 373
Query: 550 AHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGAD 592
+ DEC C LC+++ T D E+ ++T K D
Sbjct: 374 TVMDDECVACNLCVNVCPVEGCITMKTLDKGEVDERTGKPVGD 416
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ CG+ PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTSTFCGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|421850875|ref|ZP_16283816.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus NBRC 101655]
gi|371458289|dbj|GAB29019.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus NBRC 101655]
Length = 422
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VVVSLMVPCQEDKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPNITNI A AA G ADGVS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNITNILMPAHAAKRGGADGVSLINTIQSVIGVDLDAMAPMPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L+ + IA+ PI GIGGI + A +F+ G+ +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGEIARDPEMAGMPISGIGGIGTWRDAAEFLAMGSTTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D I GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMIDGLSAWM 305
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPET 547
+ V GQA+Q+ + L+ K + +A IN D C++CG C++AC D+ +QAI+ E
Sbjct: 313 IPAVSGQAIQKFVPWNTLNLKFKTIANINQDACVSCGLCHIACEDTSHQAISKTRVDGER 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 373 HYEVIEEECVGCNLCAHV 390
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ G+K PNPF LASAPPT VRRAFE GWG V KT + V NVS R
Sbjct: 1 MANLKTSFAGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
S G NIELIS++ + +++ + + +L+
Sbjct: 60 Y----GSLDYNGARMIGLNNIELISDRPLAVNIAEIKSVKRDYPDRAVVVSLMVPCQEDK 115
Query: 462 -------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DG+ L G P +S ++ +G AV +V Y E+
Sbjct: 116 WKAILPIVEETGADGIELNFGCPHG---------MSERN-MGAAVGQVPEYVEM 159
>gi|222149525|ref|YP_002550482.1| dihydropyrimidine dehydrogenase [Agrobacterium vitis S4]
gi|221736507|gb|ACM37470.1| dihydroorotate dihydrogenase protein [Agrobacterium vitis S4]
Length = 437
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 138/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM +++W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEEWRAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ ++S+ D P P+VG
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSIVSVDLDSFAPNPSVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ ITGL + K D G+
Sbjct: 283 QVCTAAMTYGFKIVEEMITGLSDWMDAKGHA---------------------SLDDICGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAQIDQ 344
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT + +
Sbjct: 314 SLDDICGRAVPNVTDWQYLNLNYIAKAQIDQDACIKCGRCHIACEDTSHQAITSIVDGAR 373
Query: 550 AH--VTDECTGCTLCLSI 565
+ DEC GC LC+++
Sbjct: 374 KFEVMEDECVGCNLCVNV 391
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|365899213|ref|ZP_09437130.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Bradyrhizobium sp. STM 3843]
gi|365420014|emb|CCE09672.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Bradyrhizobium sp. STM 3843]
Length = 441
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M + +W + K+ E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 VVVSLMVPCEEPNWTAIIKRVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W +++ ++P VKLTPN+ +I A+AA G AD VS INTV+ LM + D PWP +
Sbjct: 164 WCKAATRMPVIVKLTPNVASILPPAEAAKRGGADAVSLINTVNALMGVDIDQMAPWPHI- 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+GG+ G+ +P+ L VS+IA+ PI GIGGI+ A +F+ GA V
Sbjct: 223 -DGYGTHGGMCGSVVKPIALNMVSAIARHPATQGLPISGIGGIEKWRDAAEFMALGAVNV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ I L +
Sbjct: 282 QVCTAAMAYGFKIVEEMIADLSEWM 306
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 492 KDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF--HPETHQ 549
+D +G A R T + L+ V A I++D+CI CG+C++ C D+ +QAIT + H
Sbjct: 315 EDFVGLAAPRKTEWQHLNLDYVVKAHIDEDLCIKCGRCHIGCEDTSHQAITSLKDGQRHF 374
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC GC LC +
Sbjct: 375 EVIEEECVGCNLCAVV 390
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+ PNPF LASAPPT + V RAF+ GWG V KT +V PR
Sbjct: 1 MADLRSSFAGITSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEDPPIVNVSGPR 60
Query: 405 I--VKGTTSRHLYGPEQGSFLNIELISEK 431
+ G+ R + F NIELI+++
Sbjct: 61 YGAIHGSDRRVI------GFNNIELITDR 83
>gi|126727112|ref|ZP_01742949.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2150]
gi|126703540|gb|EBA02636.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2150]
Length = 434
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W E+ K E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIVSLMVPCEEEAWKEVLPKVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ ++S+ D P P++
Sbjct: 165 WCKKYYSKPVIVKLTPNITDIRAPAEAAKRGGADAVSLINTINSIVSVDLDAMCPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + VS IA+ FPI GIGG+ + A ++I G V
Sbjct: 225 GKG--THGGYCGPAVKPIAMSMVSEIARAPATAGFPISGIGGVTTWRDAAEYITLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG + Q D G
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSQWM-------------------DEKGHTSIQ--DFMGA 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + ++ +
Sbjct: 322 AVPNTTDWQYLNLNYVAKASINQ 344
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT V NV+ P
Sbjct: 1 MADLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSDGPPVVNVNGP 60
Query: 404 R--IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R ++ G R L NIELI+++ + N E +++++ L
Sbjct: 61 RYGVIHGADRRVL------GLNNIELITDRPLDV---------NLAEITRVKKDYPDRAL 105
Query: 457 ITEL--------------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
I L ++ +DG+ L G P +S + +G AV +V
Sbjct: 106 IVSLMVPCEEEAWKEVLPKVEATGADGIELNFGCPHG---------MSERG-MGAAVGQV 155
Query: 503 TNYTEL 508
Y E+
Sbjct: 156 PEYIEM 161
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D +G AV T++ L+ A IN + CI+CG+C+ AC D+ +QAI +
Sbjct: 314 SIQDFMGAAVPNTTDWQYLNLNYVAKASINQNDCISCGRCFAACEDTSHQAIAMSDDRKF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ V EC C LC+ +
Sbjct: 374 SVVDAECVACNLCVEV 389
>gi|294678050|ref|YP_003578665.1| dihydropyrimidine dehydrogenase [Rhodobacter capsulatus SB 1003]
gi|294476870|gb|ADE86258.1| dihydropyrimidine dehydrogenase (NADP(+)) [Rhodobacter capsulatus
SB 1003]
Length = 433
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 140/263 (53%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M ++D W + + E+ AD +ELN CPHGM ERGMG A GQ P+ V ++
Sbjct: 105 LVVSLMVPCDEDSWKSILARVEETEADGVELNFGCPHGMAERGMGAAVGQVPDYVEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNI++I A+AA G AD VS INT++ + S+ D P P +
Sbjct: 165 WVKQHSRMPCIVKLTPNISDIRKPAEAAKRGGADAVSLINTINSITSVDLDLFAPQPTI- 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GAH V
Sbjct: 224 -DGFGTHGGYCGPAVKPIALNMVAEIARNPATRGLPISGIGGVTTWRDAAEFMALGAHNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV F +V++ I+GL + K + R+ G+
Sbjct: 283 QVCTAVMTYGFKIVEEMISGLSDYMDRKGLT---------------------ETREIVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+P +++ + N T+ ++ +
Sbjct: 322 AVPKVTDWQYLNLNYTTKASIAQ 344
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ +++ G+K PNPF LASAPPT VRRAFE GWG V KT L V NVS
Sbjct: 1 MANLTSTFLGIKSPNPFWLASAPPTDKEVNVRRAFEAGWGGVVWKTLGLDGPPVVNVS-- 58
Query: 405 IVKGTTSRHLYGPEQGSFL---NIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN 461
G ++GP+ G+ L NIELI+++ + +++ + + +L+ +
Sbjct: 59 ---GPRYGAIHGPD-GTLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVVSLMVPCD 114
Query: 462 ----------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DGV L G P + +G AV +V +Y E+
Sbjct: 115 EDSWKSILARVEETEADGVELNFGCPHGM----------AERGMGAAVGQVPDYVEM 161
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ ++++G+AV +VT++ L+ A I D CI CG+C++ C D+ +QAI +
Sbjct: 312 LTETREIVGRAVPKVTDWQYLNLNYTTKASIAQDDCIKCGRCHIVCEDTSHQAIAMAADR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
+EC C LC+ +
Sbjct: 372 TVTVKEEECVACNLCVEV 389
>gi|448745605|ref|ZP_21727275.1| Aldolase-type TIM barrel [Halomonas titanicae BH1]
gi|445566333|gb|ELY22439.1| Aldolase-type TIM barrel [Halomonas titanicae BH1]
Length = 444
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 122/208 (58%), Gaps = 5/208 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SIM N++ W + E GAD +ELNL CPHGM ERGMG A GQ+P+++ ++
Sbjct: 123 LIVSIMVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTY 182
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + S+ D P VG
Sbjct: 183 WCKKHYSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVG 242
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ + V+ IA+ P PI GIGGI + A +FI GA +V
Sbjct: 243 HQ--STHGGYCGSAVKPIAMNMVAEIARDPATPTLPISGIGGISTWRDAAEFIALGAGSV 300
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLK 770
Q+C+A F +V++ GL + K
Sbjct: 301 QVCTAAMLNGFRIVEEMKDGLSRWMAEK 328
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ++ VD+SV G+K PNPF LASAPPT + V RA+E GWG V KT + V N
Sbjct: 17 SVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEEPPAV-N 75
Query: 401 VSPRIVKGTTSRHLYGP--EQGSFLNIELISEKT 432
VS R S H YG E F NIELI++++
Sbjct: 76 VSSRY-----SAH-YGKNREVIGFNNIELITDRS 103
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH----V 552
+A+ + T++ LD + +A I+ D+CI CG+CY+AC D+ +Q+I E A +
Sbjct: 339 KAIPQTTDWKHLDINFKTIAKIDQDLCIECGRCYIACEDTSHQSIAKLTEQDGARRYEVI 398
Query: 553 TDECTGCTLC 562
+EC GC LC
Sbjct: 399 EEECVGCNLC 408
>gi|149201032|ref|ZP_01878007.1| dihydropyrimidine dehydrogenase [Roseovarius sp. TM1035]
gi|149145365|gb|EDM33391.1| dihydropyrimidine dehydrogenase [Roseovarius sp. TM1035]
Length = 434
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M N+D W E+ + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 105 LIASLMVPVNEDAWREILHRVEDTGCDGVELNFGCPHGMSERGMGSAVGQVPEYVGQVAH 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + +P VKLTPNIT+I A+AA +G AD VS INT++ + S+ D P P +
Sbjct: 165 WCKKHSNLPVIVKLTPNITDIRKPAQAAKDGGADAVSLINTINSITSVDLDLFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--AHGGYCGPAVKPIALNMVAEIARDPATAGLPISGIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + K T V Q G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSQYMDDKGF-----------TSVDQL----------VGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +K + N +T+ + +
Sbjct: 322 AVPNVVNWKDLNLNYVTKARINQ 344
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV ++G+AV V N+ +L+ A IN D CI CG+CY AC D+ +QAI +
Sbjct: 314 SVDQLVGRAVPNVVNWKDLNLNYVTKARINQDDCIKCGRCYAACEDTSHQAIAMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+ PNPF LASAPPT VRRAFE GWG V KT V NV+
Sbjct: 1 MADLTTNFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEAGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN- 461
G +YG ++ NIELI+++ + + + + + +L+ +N
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEVNLEEMRRVKRDWPDRALIASLMVPVNE 115
Query: 462 ---------LKKLNSDGVSLQNGLP----KRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
++ DGV L G P +R + + V V + +GQ ++ L
Sbjct: 116 DAWREILHRVEDTGCDGVELNFGCPHGMSERGMGSAVG---QVPEYVGQVAHWCKKHSNL 172
>gi|352105971|ref|ZP_08961082.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. HAL1]
gi|350598063|gb|EHA14187.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. HAL1]
Length = 447
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 122/208 (58%), Gaps = 5/208 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SIM N++ W + E GAD +ELNL CPHGM ERGMG A GQ+P+++ ++
Sbjct: 126 LIVSIMVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTY 185
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + S+ D P VG
Sbjct: 186 WCKKHYSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVG 245
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ + V+ IA+ P PI GIGGI + A +FI GA +V
Sbjct: 246 HQ--STHGGYCGSAVKPIAMNMVAEIARDPATPTLPISGIGGISTWRDAAEFIALGAGSV 303
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLK 770
Q+C+A F +V++ GL + K
Sbjct: 304 QVCTAAMLNGFRIVEEMKDGLSRWMAEK 331
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ++ VD+SV G+K PNPF LASAPPT + V RA+E GWG V KT + V N
Sbjct: 20 SVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEEPPAV-N 78
Query: 401 VSPRIVKGTTSRHLYGP--EQGSFLNIELISEKT 432
VS R S H YG E F NIELI++++
Sbjct: 79 VSSRY-----SAH-YGKNREVIGFNNIELITDRS 106
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++ +A+ + T++ LD + +A I+ D+CI CG+CY+AC D+ +Q+I E +
Sbjct: 335 SIEAFSRKAIPQTTDWKHLDINFKTIAKIDQDLCIECGRCYIACEDTSHQSIAKLTEQNG 394
Query: 550 AH----VTDECTGCTLC 562
A + +EC GC LC
Sbjct: 395 ARRYEVIEEECVGCNLC 411
>gi|421852631|ref|ZP_16285317.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371479135|dbj|GAB30520.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 422
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VVVSLMVPCQEDKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPNITNI A AA G ADGVS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNITNILMPAHAAKRGGADGVSLINTIQSVIGVDLDAMAPMPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L+ + IA+ PI GIGGI + A +F+ G+ +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGEIARDPEMAGMPISGIGGIGTWRDAAEFLAMGSTTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D I GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMIDGLSAWM 305
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPET 547
+ V GQA+Q+ + L+ K + +A IN D C++CG C++AC D+ +QAI+ E
Sbjct: 313 IPAVSGQAIQKFVPWNTLNLKFKTIANINQDACVSCGLCHIACEDTSHQAISKTRVDGER 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 373 HYEVIEEECVGCNLCAHV 390
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ G+K PNPF LASAPPT VRRAFE GWG V KT + V NVS R
Sbjct: 1 MANLKTSFAGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
S G NIELIS++ + +++ + + +L+
Sbjct: 60 Y----GSLDYNGARMIGLNNIELISDRPLAVNIAEIKSVKRDYPDRAVVVSLMVPCQEDK 115
Query: 462 -------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DG+ L G P +S ++ +G AV +V Y E+
Sbjct: 116 WKAILPIVEETGADGIELNFGCPHG---------MSERN-MGAAVGQVPEYVEM 159
>gi|400754163|ref|YP_006562531.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398653316|gb|AFO87286.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis 2.10]
Length = 434
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 141/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W ++ + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 IIVSLMVPCEEQAWKDILPRVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ ++S++ D P P +G
Sbjct: 165 WCKKYYSKPVIVKLTPNITDIRHPARAAKAGGADAVSLINTINSIVSVNLDAMAPEPTIG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI IGG+ + A +F+ GA V
Sbjct: 225 DKG--THGGYCGPAVKPIALNMVAEIARCPQTHGLPISAIGGVTTWRDAAEFMTMGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + KG+D + D GK
Sbjct: 283 QVCTAAMTYGFNVVKEMISGLNQWM-----DDKGYD----------------RLDDFVGK 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN +++ + N + + K+N D
Sbjct: 322 AVPNVTDWQYLDLNYVAK---AKINQD 345
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTADFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D +G+AV VT++ LD A IN D CI CG+C+ AC D+ +QAI +
Sbjct: 315 LDDFVGKAVPNVTDWQYLDLNYVAKAKINQDDCIKCGRCFAACEDTSHQAIAMSEDRVFT 374
Query: 551 HVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 375 VKDDECVACNLCVNV 389
>gi|258543222|ref|YP_003188655.1| dihydropyrimidine dehydrogenase [Acetobacter pasteurianus IFO
3283-01]
gi|384043144|ref|YP_005481888.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-12]
gi|384051661|ref|YP_005478724.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-03]
gi|384054768|ref|YP_005487862.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-07]
gi|384058003|ref|YP_005490670.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-22]
gi|384060644|ref|YP_005499772.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-26]
gi|384063936|ref|YP_005484578.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-32]
gi|384119945|ref|YP_005502569.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634300|dbj|BAI00276.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-01]
gi|256637360|dbj|BAI03329.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-03]
gi|256640412|dbj|BAI06374.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-07]
gi|256643469|dbj|BAI09424.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-22]
gi|256646524|dbj|BAI12472.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-26]
gi|256649577|dbj|BAI15518.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-32]
gi|256652563|dbj|BAI18497.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655621|dbj|BAI21548.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-12]
Length = 422
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VVVSLMVPCQEDKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPNITNI A AA G ADGVS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNITNILMPAHAAKRGGADGVSLINTIQSVIGVDLDAMAPMPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L+ + IA+ PI GIGGI + A +F+ G+ +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGEIARDPEMAGMPISGIGGIGTWRDAAEFLAMGSTTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D I GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMIDGLSAWM 305
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPET 547
+ V GQA+Q+ + L+ K + +A IN D C++CG C++AC D+ +QAI+ E
Sbjct: 313 IPAVSGQAIQKFVPWNTLNLKFKTIANINQDACVSCGLCHIACEDTSHQAISKTRVDGER 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 373 HYEVIEEECVGCNLCAHV 390
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ G+K PNPF LASAPPT + VRRAFE GWG V KT + V NVS R
Sbjct: 1 MANLKTSFAGIKSPNPFWLASAPPTDKAYNVRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
S G NIELIS++ + +++ + + +L+
Sbjct: 60 Y----GSLDYNGARMIGLNNIELISDRPLAVNIAEIKSVKRDYPDRAVVVSLMVPCQEDK 115
Query: 462 -------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DG+ L G P +S ++ +G AV +V Y E+
Sbjct: 116 WKAILPIVEETGADGIELNFGCPHG---------MSERN-MGAAVGQVPEYVEM 159
>gi|255088383|ref|XP_002506114.1| predicted protein [Micromonas sp. RCC299]
gi|226521385|gb|ACO67372.1| predicted protein [Micromonas sp. RCC299]
Length = 434
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 7/208 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM Y K++W+E+ ++ E+ G DA E+N SCPHGM ER MG A GQD ++ +
Sbjct: 164 ILIASIMDEYKKENWVEVVRRCEEVGVDAFEINFSCPHGMPERKMGAAMGQDCTVLDEVC 223
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+ +P + K+TPNIT+IT+ A E DG++AINT+ +M ++ D P P V
Sbjct: 224 GWVKEVATVPVWAKMTPNITDITEPANVCLEKGMDGIAAINTIMSIMGVNLDTLAPEPCV 283
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFPILGIGGIDSADVALQFIQAGA 739
+ +T GG S A RP+ L +IA+M FP+ + GIGGID+ A +FI G+
Sbjct: 284 --EGHSTPGGYSYKAVRPIALAKCMAIAQMIKKEFPDRTLSGIGGIDTGGHAAEFILLGS 341
Query: 740 HAVQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+C+ V + +V + LQ +
Sbjct: 342 DTVQVCTGVMIHGYPLVQNLCAELQEFM 369
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 25/176 (14%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLKFPNPF + S PP T +++++AF+ GWG + KT SL D+V NV+PR
Sbjct: 63 DLSVTVNGLKFPNPFVIGSGPPGTNYTVMKKAFDEGWGGVIAKTVSLNADLVKNVTPRYA 122
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN-----------FGEYKKIREN 455
K + G E + NIELIS+++ + F+ + EYKK EN
Sbjct: 123 KMKSED---GAEVLGWQNIELISDRSFEVMLAEFKQLKEEYPDRILIASIMDEYKK--EN 177
Query: 456 LITELNLKKLNSDGV-------SLQNGLPKRQINTPVETILSVKDVIGQAVQRVTN 504
+ +++ GV S +G+P+R++ + +V D + V+ V
Sbjct: 178 WVE--VVRRCEEVGVDAFEINFSCPHGMPERKMGAAMGQDCTVLDEVCGWVKEVAT 231
>gi|110680292|ref|YP_683299.1| dihydropyrimidine dehydrogenase [Roseobacter denitrificans OCh 114]
gi|109456408|gb|ABG32613.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter
denitrificans OCh 114]
Length = 434
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 26/265 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W ++ + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 MIVSIMVPCEEQAWKDILPRVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ ++S+ D +P+P++
Sbjct: 165 WCKQYYSKPVIVKLTPNITDIRKPAAAAKRGGADAVSLINTINSIVSVDLDTMSPYPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L VS IA+ PI GIGG+ + A ++I G V
Sbjct: 225 GKG--THGGYCGPAVKPIALSMVSEIARDPETHGLPISGIGGVTTWRDAAEYITMGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG RD G
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSQWM-------------------DEKGH--TNIRDFMGA 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLN 827
AIPN +++ + N + + + + +
Sbjct: 322 AIPNTTDWQYLNLNYVAKAQINQAD 346
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+ PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTSEFLGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 R--IVKGTTSRHLYGPEQGSFLNIELISEKT 432
R ++ G R L NIELI++++
Sbjct: 61 RYGVIHGADRRVL------GMNNIELITDRS 85
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
+++D +G A+ T++ L+ A IN CI+CG+CY AC D+ +QAI +
Sbjct: 314 NIRDFMGAAIPNTTDWQYLNLNYVAKAQINQADCISCGRCYAACEDTSHQAIAMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ + +EC C LC+ +
Sbjct: 374 SVIDEECVACNLCVEV 389
>gi|359395079|ref|ZP_09188132.1| hypothetical protein KUC_1730 [Halomonas boliviensis LC1]
gi|357972326|gb|EHJ94771.1| hypothetical protein KUC_1730 [Halomonas boliviensis LC1]
Length = 447
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 121/208 (58%), Gaps = 5/208 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SIM N++ W + E GAD +ELNL CPHGM ERGMG A GQ+P+++ ++
Sbjct: 126 LIVSIMVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTY 185
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + S+ D P VG
Sbjct: 186 WCKKHYSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVG 245
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ + V+ IA+ P PI GIGGI A +FI GA +V
Sbjct: 246 HQ--STHGGYCGSAVKPIAMNMVAEIARDPATPTLPISGIGGISCWRDAAEFIALGAGSV 303
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLK 770
Q+C+A F +V++ GL + K
Sbjct: 304 QVCTAAMLNGFRIVEEMKDGLSRWMAEK 331
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ++ VD+SV G+K PNPF LASAPPT + V RA+E GWG V KT + V N
Sbjct: 20 SVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEEPPAV-N 78
Query: 401 VSPRIVKGTTSRHLYGP--EQGSFLNIELISEKT 432
VS R S H YG E F NIELI++++
Sbjct: 79 VSSRY-----SAH-YGKNREVIGFNNIELITDRS 106
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++ +A+ + T++ LD + +A I+ D+CI CG+CY+AC D+ +Q+I E
Sbjct: 335 SIEAFSRKAIPQTTDWKHLDINFKTIAQIDQDLCIECGRCYIACEDTSHQSIAKLTEQDG 394
Query: 550 AH----VTDECTGCTLC 562
+ +EC GC LC
Sbjct: 395 TRRYEVIEEECVGCNLC 411
>gi|408377715|ref|ZP_11175316.1| dihydropyrimidine dehydrogenase subunit B [Agrobacterium
albertimagni AOL15]
gi|407748706|gb|EKF60221.1| dihydropyrimidine dehydrogenase subunit B [Agrobacterium
albertimagni AOL15]
Length = 437
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ASIM +++W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LVASIMVPCVEEEWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI +I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNIADIRKPARAAKAGGTDAVSLINTINSIVSVDLDSFAPSPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + K Q D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLNDWMDAKGHQ---------------------SLDDICGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + ++ +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAHIDQ 344
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDICGRAVPNVTDWQYLNLNYIAKAHIDQDACIKCGRCHIACEDTSHQAITNMVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + DEC GC LC+++
Sbjct: 374 HFEVMEDECVGCNLCVNV 391
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ I N E K +++N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLQI---------NLQEMKMVKKN 99
>gi|339022255|ref|ZP_08646213.1| dihydroorotate dehydrogenase [Acetobacter tropicalis NBRC 101654]
gi|338750746|dbj|GAA09517.1| dihydroorotate dehydrogenase [Acetobacter tropicalis NBRC 101654]
Length = 435
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 136/271 (50%), Gaps = 28/271 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 114 VVVSLMVPCVEDSWKAILPIVEETGADGVELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 173
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P VKLTPNITNI A AA G AD VS INT+ ++ + D P P VG
Sbjct: 174 WCKQYTRMPVIVKLTPNITNILMPAHAAKRGGADAVSLINTIQSVIGVDLDQMAPMPVVG 233
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L+ + IA+ PI GIGGI S A +F+ G+ +
Sbjct: 234 GKG--THGGYCGPAVKPIALRMIGEIARDPEMAGMPISGIGGIGSWRDAAEFLAMGSTTL 291
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + F +VDD I GL + QKG G+
Sbjct: 292 QVCTAAMHYGFRIVDDMIDGLSAWM-------------------DQKGY--ADIPSLSGQ 330
Query: 803 AIPNFGEYKK--IRENLITELNLKKLNSDGV 831
AIP F + K ++ I E+N S G+
Sbjct: 331 AIPKFVNWNKLNLKFKTIAEINQDACVSCGL 361
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPETHQAHV 552
GQA+ + N+ +L+ K + +A IN D C++CG C++AC D+ +QAI + E H +
Sbjct: 329 GQAIPKFVNWNKLNLKFKTIAEINQDACVSCGLCHIACEDTSHQAIAKSLINGERHYDVI 388
Query: 553 TDECTGCTLCLSI 565
+EC GC LC +
Sbjct: 389 EEECVGCNLCAHV 401
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 43/183 (23%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+ PNPF LASAPPT + VRRAFE GWG + KT + V NVS R
Sbjct: 12 MADLRTSFAGITSPNPFWLASAPPTDKAYNVRRAFEAGWGGVIWKTLG-EDPPVVNVSSR 70
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LITE 459
S + G NIELIS++ + N E K++++ ++
Sbjct: 71 Y----GSLNYNGSRMMGLNNIELISDRPLAV---------NIAEIKQVKKEYPDRAVVVS 117
Query: 460 LN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
L +++ +DGV L G P +S ++ +G AV +V Y
Sbjct: 118 LMVPCVEDSWKAILPIVEETGADGVELNFGCPHG---------MSERN-MGAAVGQVPEY 167
Query: 506 TEL 508
E+
Sbjct: 168 VEM 170
>gi|389874613|ref|YP_006373969.1| dihydroorotate dehydrogenase family protein [Tistrella mobilis
KA081020-065]
gi|388531793|gb|AFK56987.1| dihydroorotate dehydrogenase family protein [Tistrella mobilis
KA081020-065]
Length = 434
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 122/218 (55%), Gaps = 9/218 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M N+ DW + E+ G D LELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 VVVSLMVPCNEADWAYILPMVEETGCDGLELNFGCPHGMSERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ ++P VKLTPNIT++ A+AA G AD VS INT++ ++++ D P P V
Sbjct: 163 WVKKHSRLPTIVKLTPNITDVRQSARAAKNGGADAVSLINTINSIVTVDLDVMAPTPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ S A +FI G V
Sbjct: 223 GKG--THGGYCGPAVKPIALNMVAEIARDAATRGLPISGIGGVQSWRDAAEFIALGCGGV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL----YLKSTQLKG 776
Q+C+A + F +V D I GL + Y + +G
Sbjct: 281 QVCTAAMHYGFRIVRDMIDGLNNWMDEKGYARIDDFRG 318
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S +I G++ PNPF LASAPPT V RAFE GWG V KT + +V NVS R
Sbjct: 1 MADLSCDIAGIRSPNPFWLASAPPTDKEYNVVRAFEAGWGGVVWKTLGIDPPVV-NVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
G S + G NIELI+++ + + + + +L+ N
Sbjct: 60 Y--GAVSYN--GQRIAGLNNIELITDRPLAVNLEEIARVKRNWPDRAVVVSLMVPCNEAD 115
Query: 462 -------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ DG+ L G P +S + +G AV +V Y E+
Sbjct: 116 WAYILPMVEETGCDGLELNFGCPHG---------MSERG-MGAAVGQVPEYVEM 159
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D G AV VT++ L+ K + A I+ D CI CG C++AC D+ +QAIT + +
Sbjct: 313 IDDFRGMAVPNVTDWQFLNLKYDIKARIDQDKCIKCGLCHIACEDTSHQAITAEKDGARY 372
Query: 551 H--VTDECTGCTLCL 563
V EC GC LC+
Sbjct: 373 FDVVDSECVGCNLCM 387
>gi|254466887|ref|ZP_05080298.1| dihydroorotate dehydrogenase family protein [Rhodobacterales
bacterium Y4I]
gi|206687795|gb|EDZ48277.1| dihydroorotate dehydrogenase family protein [Rhodobacterales
bacterium Y4I]
Length = 434
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W ++ + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 VIVSIMVPCEEQAWKDILPQVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ D P P +G
Sbjct: 165 WCKKYYSKPVIVKLTPNITDIRHPARAAHAGNADAVSLINTINSITSVNLDSMAPEPTIG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI IGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARDAQTRGLPISAIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG + Q D G
Sbjct: 283 QVCTAAMTYGFNVVKEMISGLSNWM-------------------DEKGYTSTQ--DFIGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLDLNYVTKAKISQ 344
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S +D IG AV VT++ LD A I+ D CI CG+CY AC D+ +QAI +
Sbjct: 314 STQDFIGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCGRCYAACEDTSHQAIAMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
>gi|390960118|ref|YP_006423875.1| dihydroorotate dehydrogenase family protein [Terriglobus roseus DSM
18391]
gi|390415036|gb|AFL90540.1| dihydroorotate dehydrogenase family protein [Terriglobus roseus DSM
18391]
Length = 468
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 136/254 (53%), Gaps = 25/254 (9%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIAS+M N++ W ++ K E AGAD LELN CPHGM ERGMG A GQ PE I+
Sbjct: 100 VLIASLMVESNRESWHDIVAKVEDAGADGLELNFGCPHGMSERGMGSAVGQVPEYAERIT 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+ + P VKLTPNI++I A+AA G A +SAINT++ + + D P P V
Sbjct: 160 SWVKEKARTPVIVKLTPNISDIRMPARAAKRGGAHALSAINTINSITGIDLDTLEPRPKV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI-AKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+T+GG G A +P+ L V I + P+ GIGG+ + A++F+ GA V
Sbjct: 220 DGS--STHGGYCGPAVKPIALSMVQQIMSDAEAALPLSGIGGVATWRDAVEFLLLGAGNV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV + + +V+D G+ L+ KG++ D G
Sbjct: 278 QVCTAVMHYGYRIVEDMADGM-----LQWMSEKGFE----------------TIDDFRGL 316
Query: 803 AIPNFGEYKKIREN 816
++P E+K++ N
Sbjct: 317 SLPKMREWKQLNMN 330
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 68/165 (41%), Gaps = 27/165 (16%)
Query: 353 CGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSR 412
CG+ NPF LASAPPT + RAF+ GWG AV KT + VTNVS R +S
Sbjct: 9 CGIPCLNPFWLASAPPTNCGEQIMRAFDAGWGGAVWKTIG---EPVTNVSSRY----SSL 61
Query: 413 HLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN----------L 462
G NIELIS++ + + +L+ E N +
Sbjct: 62 DWEGRRMMGLNNIELISDRPTITNLREIAEVKRRYPKHVLIASLMVESNRESWHDIVAKV 121
Query: 463 KKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTE 507
+ +DG+ L G P + +G AV +V Y E
Sbjct: 122 EDAGADGLELNFGCPHGM----------SERGMGSAVGQVPEYAE 156
>gi|384247217|gb|EIE20704.1| Dihydroorotate oxidase [Coccomyxa subellipsoidea C-169]
Length = 428
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA E+N SCPHGM ER MG+A GQD +++ +
Sbjct: 158 ILIASIMEEYNKAAWEELIARCEQTGVDAFEINFSCPHGMPERKMGMAMGQDCQLLEEVC 217
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ A +GV+AINT++ +M ++ D P P+V
Sbjct: 218 GWINAKASVPVWAKMTPNITDITVPARTALAAGCEGVAAINTITSVMGINLDTLRPEPSV 277
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-----FPILGIGGIDSADVALQFIQAG 738
+ +T GG S A +P+ L V SIA+M + + IGG+++ A +FI G
Sbjct: 278 --EGYSTPGGYSSKAVKPIALAKVMSIAQMVASEYGGARDVSAIGGVETGRDAAEFILLG 335
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A++VQ+C+ V + +V GLQ +
Sbjct: 336 ANSVQVCTGVMLHGYPLVKQLCGGLQEFM 364
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 22/152 (14%)
Query: 347 DISV-EICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
D+S+ GLK PNPF + S PP T ++++AF+ GWG + KT SL V NV+PR
Sbjct: 56 DLSITHFSGLKLPNPFVIGSGPPGTNYQVMKKAFDEGWGAVIAKTVSLDSSKVINVTPRY 115
Query: 406 --VKGTTSRHLYGPEQGSFLNIELISEKTAFI----FFFLFQAIPN-------FGEYKKI 452
+K + + + G E NIELIS++ + F L Q P+ EY K
Sbjct: 116 ARMKASDKKEVIGWE-----NIELISDRPLEVMLDEFKRLKQEYPDRILIASIMEEYNKA 170
Query: 453 R-ENLITELNLKKLNSDGV--SLQNGLPKRQI 481
E LI +++ + S +G+P+R++
Sbjct: 171 AWEELIARCEQTGVDAFEINFSCPHGMPERKM 202
>gi|254503835|ref|ZP_05115986.1| dihydroorotate dehydrogenase family protein [Labrenzia alexandrii
DFL-11]
gi|222439906|gb|EEE46585.1| dihydroorotate dehydrogenase family protein [Labrenzia alexandrii
DFL-11]
Length = 437
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 28/264 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M + +W+++ K E AD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 LVVSLMVPCEEQNWIDILKAVEDTEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPNIT+I A+AA G AD VS INT++ ++ + D +P P V
Sbjct: 164 WVKKHSRMPCIVKLTPNITDIRKPAQAAKAGGADAVSLINTINSIVGVDLDAMSPAPMVD 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA +V
Sbjct: 224 GKG--AHGGYCGPAVKPIALNMVAEIARDPETHGLPISGIGGVTTWRDAAEFMALGAGSV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDK-EG 801
Q+C+A F VV+D I GL + +KG Y D+ G
Sbjct: 282 QVCTAAMTYGFKVVEDMIEGLSDWM-------------------DEKG---YTSVDQVVG 319
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
+A+PN +++ + N I + + +
Sbjct: 320 RAVPNASDWQHLNLNYIAKAKIDQ 343
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV V+G+AV +++ L+ A I+ D+CI CG+C++AC D+ +QAIT + +
Sbjct: 313 SVDQVVGRAVPNASDWQHLNLNYIAKAKIDQDLCIQCGRCHIACEDTSHQAITNMVDGAR 372
Query: 550 AH--VTDECTGCTLCLSI 565
+ +EC GC LC+++
Sbjct: 373 KFEVIDEECVGCNLCVNV 390
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ G+K PNPF LASAPPT V RAF+ GWG V KT D V NV+ P
Sbjct: 1 MADLTTNFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLG-DGDPVVNVNGP 59
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKI--------- 452
R + G R L G NIELI+++ + + + + +
Sbjct: 60 RYGAIHG-KDRQLIG-----LNNIELITDRPLEVNLREIKQVKRDWPDRALVVSLMVPCE 113
Query: 453 RENLITELN-LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+N I L ++ +DGV L G P +S + +G AV +V Y E+
Sbjct: 114 EQNWIDILKAVEDTEADGVELNFGCPHG---------MSERG-MGSAVGQVPEYIEM 160
>gi|118776473|gb|ABL14244.1| dihydroprimidine dehydrogenase [Bacillus fordii]
Length = 426
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ + G D ELNL CPHGM ERGMG A GQ P++V +L
Sbjct: 101 IIASLMVEPKREKWHEIVKRVQDVGVDGFELNLGCPHGMSERGMGSAVGQHPDLVEKTTL 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLM-SLSADGNPWPAVG 684
+ + + ++P KLTPNIT+IT A+AA G AD +S INT++ LM S+ G +
Sbjct: 161 YAKEASEVPVITKLTPNITDITATARAAQRGGADAISMINTINSLMESIWIHGIRSRMI- 219
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
L +GG SG A +P+ L + A+ PI GIGG+ + ++F+ GA VQ
Sbjct: 220 -NGLGAHGGYSGPAVKPIALNMIGECARQKDITIPISGIGGVSTWQDTVEFMLMGAGGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
IC+A + F+++DD GL L
Sbjct: 279 ICTAAMHHGFSIIDDLTEGLSNHL 302
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-TFHPE 546
I SV ++IG +V++ T+++ LD ++VA IN+D+CINC KC++AC D+ +Q I E
Sbjct: 307 IASVSEIIGASVEKYTDWSNLDLNHKIVARINNDICINCNKCHIACEDTSHQCIDMLTDE 366
Query: 547 THQAHV---TDECTGCTLCLSILIASIMC 572
++ +EC GC LC SI+C
Sbjct: 367 NGHGYLKVREEECVGCNLC------SIVC 389
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS++ G+K PNP LA APPT V+RAFE GWG AV KT + + NV+ R
Sbjct: 1 MADISIQFAGIKSPNPHWLAPAPPTNTGYQVQRAFEAGWGGAVWKTLG---EPILNVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G F NIELIS++
Sbjct: 58 F----AAHHFNGRRVAGFNNIELISDR 80
>gi|418939698|ref|ZP_13493087.1| dihydroorotate dehydrogenase family protein [Rhizobium sp.
PDO1-076]
gi|375053583|gb|EHS49973.1| dihydroorotate dehydrogenase family protein [Rhizobium sp.
PDO1-076]
Length = 437
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ASIM +++W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LVASIMVPCVEEEWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI +I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYSRMPVITKLTPNIADIRKPARAAKSGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARDPETHGLPISGIGGVTTWRDAAEFMVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVEEMITGLSDWMDAKGHR---------------------DLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + ++ +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAHIDQ 344
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT-FHPETHQ 549
+ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT F +
Sbjct: 315 LDDITGRAVPNVTDWQYLNLNYIAKAHIDQDACIKCGRCHIACEDTSHQAITQFVDGVRK 374
Query: 550 AHVT-DECTGCTLCLSI 565
V DEC GC LC+++
Sbjct: 375 FEVMEDECVGCNLCVNV 391
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFRAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|339503847|ref|YP_004691267.1| dihydrooronate dehydrogenase-like protein [Roseobacter litoralis
Och 149]
gi|338757840|gb|AEI94304.1| dihydrooronate dehydrogenase-like protein [Roseobacter litoralis
Och 149]
Length = 434
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W ++ K E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 MIVSIMVPCEEQAWKDILPKVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A AA G AD VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYYSKPVIVKLTPNITDVRKPAAAAKRGGADAVSLINTINSIVSVDLDTMSPHPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L VS IA+ PI GIGG+ + A ++I G V
Sbjct: 225 GKG--THGGYCGPAVKPIALSMVSEIARDAETRGMPISGIGGVTTWRDAAEYITMGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG RD G
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSQWM-------------------DEKGH--TDIRDFMGA 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLN 827
AIPN +++ + N I + + + +
Sbjct: 322 AIPNTTDWQYLNLNYIAKAQINQAD 346
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+ PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTSEFLGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 R--IVKGTTSRHLYGPEQGSFLNIELISEKT 432
R ++ G R L NIELI++++
Sbjct: 61 RYGVIHGADRRVL------GMNNIELITDRS 85
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D +G A+ T++ L+ A IN CI+CG+CY AC D+ +QAI + +
Sbjct: 315 IRDFMGAAIPNTTDWQYLNLNYIAKAQINQADCISCGRCYAACEDTSHQAIAMSEDRVFS 374
Query: 551 HVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 375 VIDEECVACNLCVEV 389
>gi|242237505|ref|YP_002985686.1| dihydropyrimidine dehydrogenase [Dickeya dadantii Ech703]
gi|242129562|gb|ACS83864.1| dihydroorotate dehydrogenase family protein [Dickeya dadantii
Ech703]
Length = 437
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 MIVSIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIERVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
W + +P VKLTPNIT+I A+AA G AD VS INT++ +M + D P G
Sbjct: 164 WCKQYCSLPVIVKLTPNITDIRYPARAAKRGGADAVSLINTINSVMGVDLDQMLMTPHTG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ F PI GIGGI + A +FI G V
Sbjct: 224 GKG--SHGGYCGPAVKPIALNMVSEIARDPDTFGLPISGIGGISTWRDAAEFIALGCGTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV Q F +V D I+GL +
Sbjct: 282 QVCTAVMVQGFPIVRDMISGLSNFM 306
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S E G+K PNPF LASAPPT V RAFE GWG V KT L +V PR
Sbjct: 1 MADLSTEFLGIKSPNPFWLASAPPTDKEYNVVRAFEAGWGGVVWKTLGLDPHVVNVSGPR 60
Query: 405 --IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ G R L NIELI+++ + N E +++ N
Sbjct: 61 YSTLLGADRRVL------GLNNIELITDRPLHV---------NLEEIARVKRN 98
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP--ET 547
S++ G+AV VT++ L+ A+I+ +CI CG+C++AC D+ +QAIT E
Sbjct: 313 SIEAFRGRAVSSVTDWRYLNLNHIDKAVIDQSLCIKCGRCHLACEDTSHQAITRQKNGER 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H ++C GC LC+SI
Sbjct: 373 HFEVKEEDCVGCNLCVSI 390
>gi|6177796|dbj|BAA86060.1| JPR ORF1 [Pyrus pyrifolia]
Length = 424
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 153 ILIASIMEEYNKAGWEELIDRVEQTGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVC 212
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ A +GVSAINT+ +M ++ P P V
Sbjct: 213 GWINAKATVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLTTLRPEPCV 272
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP------NFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V +IAK+ ++ + GIGG++S A +FI
Sbjct: 273 --EGYSTPGGYSAKAVHPIALAKVMNIAKLMKSEFGDTDYSLSGIGGVESGGDAAEFILL 330
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA+ VQ+C+ V + VV + LQ +
Sbjct: 331 GANTVQVCTGVMMHGYGVVKKLCSELQDFM 360
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 26/196 (13%)
Query: 311 GKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLV-DISVEICGLKFPNPFGLASAPPT 369
GK + + + LT P + F S D+SV + GL PNPF + S PP
Sbjct: 11 GKNPVAEFSRRPRPEVRLTRPSRVGFRVFASESKAEPDLSVTVNGLHMPNPFVIGSGPPG 70
Query: 370 TASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK------GTTSRHLYGPEQGSFL 423
T ++++RAF+ GWG + KT SL+ D V NV+PR + G+ + G E
Sbjct: 71 TNYTVMKRAFDEGWGAVIAKTVSLEADKVKNVTPRYARLRVDGNGSAKGQIIGWE----- 125
Query: 424 NIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN-------LKKLNSDGV------ 470
NIELIS++ I F+ + + + +++ E N + ++ GV
Sbjct: 126 NIELISDRPLDIMLKEFKQLKQEYPDRILIASIMEEYNKAGWEELIDRVEQTGVDALEIN 185
Query: 471 -SLQNGLPKRQINTPV 485
S +G+P+R++ V
Sbjct: 186 FSCPHGMPERKMGAAV 201
>gi|116253448|ref|YP_769286.1| dihydropyrimidine dehydrogenase [Rhizobium leguminosarum bv. viciae
3841]
gi|115258096|emb|CAK09197.1| putative dihydropyrimidine dehydrogenase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 437
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RSLEDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT-FHPETH 548
S++D+ G+AV VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT F
Sbjct: 314 SLEDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNFVDGVR 373
Query: 549 QAHVTD-ECTGCTLCLSI 565
V D EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|322433905|ref|YP_004216117.1| dihydroorotate dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321161632|gb|ADW67337.1| dihydroorotate dehydrogenase family protein [Granulicella
tundricola MP5ACTX9]
Length = 489
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 135/254 (53%), Gaps = 25/254 (9%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IAS+M ++ W ++ + E AGAD LELN CPHGM ERGMG A GQ PE I+
Sbjct: 100 VVIASLMVESKREVWHDMVAQAEDAGADGLELNFGCPHGMSERGMGSAVGQVPEYAEQIT 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV+ + P VKLTPNI++I A+AA G AD +SAINT++ + + D P P V
Sbjct: 160 YWVKERARTPVIVKLTPNISDIRMPARAAKRGGADALSAINTINSITGIDLDTFEPRPMV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI-AKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +++GG G A +P+ L V I A P+ GIGGI + A +FI G V
Sbjct: 220 DGK--SSHGGYCGPAVKPIALNMVQQIMADKDAMLPLSGIGGIGTWKDAAEFILLGCGNV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A + + +V+D GL L+ KG++ D G
Sbjct: 278 QVCTAAMHYGYRIVEDMADGL-----LEWMAAKGFE----------------TIEDFRGL 316
Query: 803 AIPNFGEYKKIREN 816
++PN E+K++ N
Sbjct: 317 SLPNVREWKQLNLN 330
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 354 GLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRH 413
G+K NPF LASAPPT + RAF+ GWG AV KT + +TNVS R +S
Sbjct: 10 GIKCLNPFWLASAPPTNCGEQIMRAFDAGWGGAVWKTIG---EPITNVSSRY----SSID 62
Query: 414 LYGPEQGSFLNIELISEK 431
G F NIELIS++
Sbjct: 63 WAGQRMMGFNNIELISDR 80
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF 543
+++D G ++ V + +L+ ++VA I+ D CI C CY AC D +Q I
Sbjct: 309 TIEDFRGLSLPNVREWKQLNLNYRIVAKIHADKCIGCQLCYTACWDGAHQCIHL 362
>gi|126462585|ref|YP_001043699.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides ATCC
17029]
gi|221639626|ref|YP_002525888.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides KD131]
gi|126104249|gb|ABN76927.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Rhodobacter sphaeroides ATCC
17029]
gi|221160407|gb|ACM01387.1| Dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase [Rhodobacter sphaeroides KD131]
Length = 434
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M +++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVVSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPN+T+I A+AA G AD VS INT++ + + D P P +
Sbjct: 165 WVKQHSRMPCIVKLTPNVTDIRKPAEAARRGGADAVSLINTINSITGVDIDSFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A++F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETHGLPISGIGGVTTWRDAVEFMLLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + KG+ + D G+
Sbjct: 283 QVCTAAMTYGFRVVQEMISGLSDYM-----DAKGFASTA----------------DLVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLNLNYVTKAQIDQ 344
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D++G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI +
Sbjct: 314 STADLVGRAVPNVTDWQYLNLNYVTKAQIDQDLCIKCGRCYAACEDTSHQAIAMSTDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+EC C LC+ +
Sbjct: 374 TVKDEECVACNLCVDV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 45/185 (24%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MANLRSDFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LI 457
G +YG ++ NIELI+++ + N E K ++ + L+
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEV---------NLREIKSVKRDYPDRALV 106
Query: 458 TEL--------------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503
L +++ +DGV L G P + +G AV +V
Sbjct: 107 VSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGM----------AERGMGSAVGQVP 156
Query: 504 NYTEL 508
Y E+
Sbjct: 157 EYIEM 161
>gi|88799395|ref|ZP_01114973.1| dihydropyrimidine dehydrogenase [Reinekea blandensis MED297]
gi|88777934|gb|EAR09131.1| dihydropyrimidine dehydrogenase [Reinekea sp. MED297]
Length = 424
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 131/254 (51%), Gaps = 26/254 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M ++ W + K+ EK GAD LELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LVVSLMVPCEENAWKTIVKEVEKTGADGLELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + K+P VKLTPNIT+I A+AA G AD VS INT++ + + D P V
Sbjct: 163 WCKQYSKLPVIVKLTPNITDIRYSARAANRGGADAVSLINTINSITGIDLDQMTARPIVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +T+GG G A +P+ L VS IA+ PI GIGGI + A +FI GA V
Sbjct: 223 GK--STHGGYCGPAVKPIALNMVSEIARDPETQRLPISGIGGISNWRDAAEFISLGAGCV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + GL + K + + D +G
Sbjct: 281 QVCTAAMVYGFRIVKEMQDGLNNWMDSKGYE---------------------RLTDFQGL 319
Query: 803 AIPNFGEYKKIREN 816
A+PN ++K + N
Sbjct: 320 AVPNTTDWKYLNMN 333
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S + G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSTDFVGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL---- 460
S YG E F NIELI++++ I +A+ + + +L+
Sbjct: 60 YSAIYDS---YG-EVSGFNNIELITDRSLEINLREIEAVKKSWPDRALVVSLMVPCEENA 115
Query: 461 ------NLKKLNSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
++K +DG+ L +G+P+R + V V + + Q + Y++L
Sbjct: 116 WKTIVKEVEKTGADGLELNFGCPHGMPERGMGAAVG---QVPEYVEQVTRWCKQYSKL 170
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D G AV T++ L+ +VVA I+ D CI CG+CY+ C D+ +QAI P+
Sbjct: 313 LTDFQGLAVPNTTDWKYLNMNYKVVADIDQDKCIGCGRCYIGCEDTSHQAIELTPQADGT 372
Query: 551 H----VTDECTGCTLC 562
+ + +EC GC LC
Sbjct: 373 NRFDIIEEECVGCNLC 388
>gi|254475131|ref|ZP_05088517.1| dihydroorotate dehydrogenase family protein [Ruegeria sp. R11]
gi|214029374|gb|EEB70209.1| dihydroorotate dehydrogenase family protein [Ruegeria sp. R11]
Length = 434
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W ++ + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 IIVSIMVPCEEQAWKDILPRVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ ++S+ D P P +G
Sbjct: 165 WCKKYYSKPVIVKLTPNITDIRHPARAAKAGGADAVSLINTINSIVSVDLDAMAPEPTIG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI IGG+ + A +F+ GA V
Sbjct: 225 DKG--THGGYCGPAVKPIALNMVAEIARCPQTHGLPISAIGGVTTWRDAAEFMTMGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + K + D GK
Sbjct: 283 QVCTAAMTYGFNVVKEMISGLNQWMDDKGYK---------------------TLDDFVGK 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNVTDWQYLNLNYVAKAKISQ 344
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTADFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D +G+AV VT++ L+ A I+ D CI CG+C+ AC D+ +QAI +
Sbjct: 314 TLDDFVGKAVPNVTDWQYLNLNYVAKAKISQDDCIKCGRCFAACEDTSHQAIAMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
>gi|424883042|ref|ZP_18306674.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392519405|gb|EIW44137.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 437
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI++I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RNLEDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT-FHPETH 548
+++D+ G+AV VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT F
Sbjct: 314 NLEDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNFVDGVR 373
Query: 549 QAHVTD-ECTGCTLCLSI 565
V D EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|163744663|ref|ZP_02152023.1| dihydropyrimidine dehydrogenase [Oceanibulbus indolifex HEL-45]
gi|161381481|gb|EDQ05890.1| dihydropyrimidine dehydrogenase [Oceanibulbus indolifex HEL-45]
Length = 437
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASIMVPCEEEAWKAILPHVEETGADGIELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + ++P VKLTPNITN+ A+AA G AD VS INT++ + S+ D +P P +
Sbjct: 165 WCKMYTRMPVIVKLTPNITNVLYPAEAAKRGGADAVSLINTINSITSVDLDLFSPEPMID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETHGLPISGIGGVTTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG + + G+
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSEYM-------------------DEKGMTSVD--ELVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN ++ ++ N + + + +
Sbjct: 322 AVPNVTDWNQLNLNYVAKAKIDQ 344
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV +++G+AV VT++ +L+ A I+ D+CI+CG+C+ AC D+ +QAI +
Sbjct: 312 MTSVDELVGRAVPNVTDWNQLNLNYVAKAKIDQDLCISCGRCFAACEDTSHQAIAMSEDR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
+ +EC C LC+++
Sbjct: 372 TFTVIDEECVACNLCVNV 389
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 27/176 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ E G+K PNPF LASAPPT VRRA+E GWG V KT ++ V NV+
Sbjct: 1 MADLRSEFIGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGMEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL-- 460
G +YG ++ NIELI+++ + +A+ + + +++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEVNLREMKAVKRDYPDRALIASIMVPCEE 115
Query: 461 --------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
++++ +DG+ L G P + +G AV +V Y E+
Sbjct: 116 EAWKAILPHVEETGADGIELNFGCPHGM----------AERGMGSAVGQVPEYIEM 161
>gi|429209752|ref|ZP_19200979.1| Dihydropyrimidine dehydrogenase [Rhodobacter sp. AKP1]
gi|428187295|gb|EKX55880.1| Dihydropyrimidine dehydrogenase [Rhodobacter sp. AKP1]
Length = 434
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M +++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVVSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPN+T+I A+AA G AD VS INT++ + + D P P +
Sbjct: 165 WVKQHSRMPCIVKLTPNVTDIRKPAEAARRGGADAVSLINTINSITGVDIDSFVPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A++F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETHGLPISGIGGVTTWRDAVEFMLLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + KG+ + D G+
Sbjct: 283 QVCTAAMTYGFRVVQEMISGLSDYM-----DAKGFASTA----------------DLVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLNLNYVTKAQIDQ 344
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D++G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI +
Sbjct: 314 STADLVGRAVPNVTDWQYLNLNYVTKAQIDQDLCIKCGRCYAACEDTSHQAIAMSTDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+EC C LC+ +
Sbjct: 374 TVKDEECVACNLCVDV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 45/185 (24%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MANLRSDFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LI 457
G +YG ++ NIELI+++ + N E K ++ + L+
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEV---------NLREIKSVKRDYPDRALV 106
Query: 458 TEL--------------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503
L +++ +DGV L G P + +G AV +V
Sbjct: 107 VSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGM----------AERGMGSAVGQVP 156
Query: 504 NYTEL 508
Y E+
Sbjct: 157 EYIEM 161
>gi|355646770|ref|ZP_09054605.1| hypothetical protein HMPREF1030_03691 [Pseudomonas sp. 2_1_26]
gi|354828309|gb|EHF12432.1| hypothetical protein HMPREF1030_03691 [Pseudomonas sp. 2_1_26]
Length = 424
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRVDGTHRYEVIDAECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVQGINNIELITDRS 83
>gi|424896661|ref|ZP_18320235.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393180888|gb|EJC80927.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 437
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDEKGHR---------------------SLEDITGH 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S++D+ G AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLEDITGHAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITNVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|424943142|ref|ZP_18358905.1| probable oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|346059588|dbj|GAA19471.1| probable oxidoreductase [Pseudomonas aeruginosa NCMG1179]
Length = 424
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKAHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 388
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVHGINNIELITDRS 83
>gi|77463755|ref|YP_353259.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|77388173|gb|ABA79358.1| dihydroorotate oxidase B, catalytic subunit / dihydropyrimidine
dehydrogenase (NADP+) / dihydrouracil dehydrogenase
(NAD+) [Rhodobacter sphaeroides 2.4.1]
Length = 434
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M +++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVVSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPN+T+I A+AA G AD VS INT++ + + D P P +
Sbjct: 165 WVKQHSQMPCIVKLTPNVTDIRKPAEAARRGGADAVSLINTINSITGVDIDSFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A++F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETHGLPISGIGGVTTWRDAVEFMLLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + KG+ + D G+
Sbjct: 283 QVCTAAMTYGFRVVQEMISGLSDYM-----DAKGFASTA----------------DLVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLNLNYVTKAEIDQ 344
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D++G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI +
Sbjct: 314 STADLVGRAVPNVTDWQYLNLNYVTKAEIDQDLCIKCGRCYAACEDTSHQAIAMSTDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+EC C LC+ +
Sbjct: 374 TVKDEECVACNLCVDV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 45/185 (24%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MANLRSDFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LI 457
G +YG ++ NIELI+++ + N E K ++ + L+
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEV---------NLREIKSVKRDYPDRALV 106
Query: 458 TEL--------------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503
L +++ +DGV L G P + +G AV +V
Sbjct: 107 VSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGM----------AERGMGSAVGQVP 156
Query: 504 NYTEL 508
Y E+
Sbjct: 157 EYIEM 161
>gi|402488808|ref|ZP_10835615.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. CCGE 510]
gi|401812275|gb|EJT04630.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. CCGE 510]
Length = 437
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI++I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RSLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT +
Sbjct: 314 SLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNVVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|418588432|ref|ZP_13152444.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592958|ref|ZP_13156817.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P2]
gi|421515056|ref|ZP_15961742.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PAO579]
gi|375040828|gb|EHS33560.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P1]
gi|375048211|gb|EHS40739.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P2]
gi|404348784|gb|EJZ75121.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PAO579]
Length = 424
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKAHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVQGINNIELITDRS 83
>gi|107099425|ref|ZP_01363343.1| hypothetical protein PaerPA_01000437 [Pseudomonas aeruginosa PACS2]
gi|313111935|ref|ZP_07797724.1| putative dihydroorotate dehydrogenase [Pseudomonas aeruginosa
39016]
gi|386056508|ref|YP_005973030.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa M18]
gi|386068650|ref|YP_005983954.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa NCGM2.S1]
gi|392981851|ref|YP_006480438.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
DK2]
gi|416856288|ref|ZP_11911932.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
138244]
gi|419755921|ref|ZP_14282273.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PADK2_CF510]
gi|310884226|gb|EFQ42820.1| putative dihydroorotate dehydrogenase [Pseudomonas aeruginosa
39016]
gi|334842163|gb|EGM20776.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
138244]
gi|347302814|gb|AEO72928.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa M18]
gi|348037209|dbj|BAK92569.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa NCGM2.S1]
gi|384397583|gb|EIE43994.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317356|gb|AFM62736.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
DK2]
gi|453045819|gb|EME93537.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PA21_ST175]
Length = 424
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVQGINNIELITDRS 83
>gi|358249226|ref|NP_001239758.1| uncharacterized protein LOC100804632 [Glycine max]
gi|255646113|gb|ACU23543.1| unknown [Glycine max]
Length = 424
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 119/210 (56%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA E+N SCPHGM ER MG A GQD ++ +
Sbjct: 153 ILIASIMEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERKMGAAVGQDCALLEEVC 212
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + IP + K+TPNIT+I+ A+ A +GVSAINT+ +M ++ D P P V
Sbjct: 213 GWINAKATIPVWAKMTPNITDISQPARVALSSGCEGVSAINTIMSVMGINLDTLRPEPCV 272
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM N+ + IGG+++ A +FI
Sbjct: 273 --EGYSTPGGYSAKAVHPIALGKVMSIAKMMKSEFDSENYTLSAIGGVETGGDAAEFILL 330
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA+ VQ+C+ V + +V LQ +
Sbjct: 331 GANTVQVCTGVMMHGYGLVKKLCLELQDFM 360
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI- 405
D+SV + GL PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 48 DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
Query: 406 -VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
++ R G G + NIELIS++ I F+ + + + +++ E N
Sbjct: 108 RLRAGADRSAKGEIIG-WENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAA 166
Query: 462 ----LKKLNSDGV-------SLQNGLPKRQINTPV 485
+ ++ GV S +G+P+R++ V
Sbjct: 167 WEELIDRVEQTGVDAFEINFSCPHGMPERKMGAAV 201
>gi|15595636|ref|NP_249130.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|9946297|gb|AAG03828.1|AE004481_4 probable oxidoreductase [Pseudomonas aeruginosa PAO1]
Length = 425
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 104 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 164 WCKAHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 224 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 282 QVCTAAMLHGFRIVEDMQDGLARWM 306
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 298 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 354
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 355 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 389
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 2 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 60
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 61 Y-----SAH-FGPNRQVQGINNIELITDRS 84
>gi|218889181|ref|YP_002438045.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa LESB58]
gi|218769404|emb|CAW25164.1| probable oxidoreductase [Pseudomonas aeruginosa LESB58]
Length = 425
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 104 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 164 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 224 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 282 QVCTAAMLHGFRIVEDMQDGLARWM 306
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + + E + D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 298 MQDGLARWMDSHGYERL---SDFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 354
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 355 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 389
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 2 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 60
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 61 Y-----SAH-FGPNRQVQGINNIELITDRS 84
>gi|116054170|ref|YP_788613.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254237329|ref|ZP_04930652.1| hypothetical protein PACG_03400 [Pseudomonas aeruginosa C3719]
gi|254243537|ref|ZP_04936859.1| hypothetical protein PA2G_04355 [Pseudomonas aeruginosa 2192]
gi|420137021|ref|ZP_14645024.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CIG1]
gi|421151506|ref|ZP_15611119.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 14886]
gi|421157454|ref|ZP_15616827.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 25324]
gi|421165306|ref|ZP_15623642.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC
700888]
gi|421172160|ref|ZP_15629940.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CI27]
gi|421178349|ref|ZP_15635964.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa E2]
gi|115589391|gb|ABJ15406.1| putative dihydroorotate dehydrogenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169260|gb|EAZ54771.1| hypothetical protein PACG_03400 [Pseudomonas aeruginosa C3719]
gi|126196915|gb|EAZ60978.1| hypothetical protein PA2G_04355 [Pseudomonas aeruginosa 2192]
gi|403250221|gb|EJY63674.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CIG1]
gi|404527262|gb|EKA37431.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 14886]
gi|404538387|gb|EKA47930.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CI27]
gi|404542279|gb|EKA51605.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC
700888]
gi|404548679|gb|EKA57626.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa E2]
gi|404550606|gb|EKA59339.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 25324]
Length = 425
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 104 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 164 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 224 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 282 QVCTAAMLHGFRIVEDMQDGLARWM 306
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 298 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 354
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 355 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 389
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 2 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 60
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 61 Y-----SAH-FGPNRQVQGINNIELITDRS 84
>gi|163758602|ref|ZP_02165689.1| putative dihydropyrimidine dehydrogenase [Hoeflea phototrophica
DFL-43]
gi|162283892|gb|EDQ34176.1| putative dihydropyrimidine dehydrogenase [Hoeflea phototrophica
DFL-43]
Length = 436
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W + + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 MIVSIMVPCEEASWKAILPRVEDTGADGIELNFGCPHGMSERGMGSAVGQVPEYIQMVAE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P VKLTPNIT+I A+AA G AD VS INT+S ++S+ D P P +
Sbjct: 165 WCKQYCRLPVIVKLTPNITDIRYPARAAKAGGADAVSLINTISSIVSVDLDNFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGG+ + A +FI G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDAETRGLPISGIGGVQTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + GL + K + D +G+
Sbjct: 283 QVCTAAMTYGFKIVQEMAQGLSDWMDEKGYE---------------------TIADFQGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLNLNYVTKAKIDQ 344
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G+AV VT++ L+ A I+ D+CI CG+C++AC D+ +QAIT
Sbjct: 314 TIADFQGRAVPNVTDWQYLNLNYVTKAKIDQDLCIKCGRCHIACEDTSHQAITSMVDGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + DEC GC LC+++
Sbjct: 374 HFEVMDDECVGCNLCVNV 391
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S G+K PNPF LASAPPT + V RAFE GWG V KT V NV+
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGEAGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G ++GP++ NIELI+++
Sbjct: 59 ---GPRYGAIWGPDRRLLGLNNIELITDR 84
>gi|421593477|ref|ZP_16038033.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. Pop5]
gi|403700582|gb|EJZ17703.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. Pop5]
Length = 437
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDEKGHK---------------------TLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNVTDWQYLNLNYVAKAKIDQ 344
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDITGRAVPNVTDWQYLNLNYVAKAKIDQDACIKCGRCHIACEDTSHQAITNVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEK 588
H + +EC GC LC+S+ T + L K+T K
Sbjct: 374 HFEVIDEECVGCNLCVSVCSVENCITMEQLPAGSLDKRTGK 414
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|424871980|ref|ZP_18295642.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393167681|gb|EJC67728.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 437
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI++I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RSLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT-FHPETH 548
S+ D+ G+AV VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT F
Sbjct: 314 SLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNFVDGAR 373
Query: 549 QAHVTD-ECTGCTLCLSI 565
V D EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|83944378|ref|ZP_00956833.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. EE-36]
gi|83953420|ref|ZP_00962142.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83842388|gb|EAP81556.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83844922|gb|EAP82804.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. EE-36]
Length = 434
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASIMVPCEEEAWKAILPHVEETGADGIELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + ++P VKLTPNITN+ A+AA G AD VS INT++ + S+ D P P +
Sbjct: 165 WCKQYTRMPVIVKLTPNITNVLYPAEAAKRGGADAVSLINTINSITSVDLDLFAPEPMID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETADMPISGIGGVTTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F VV + I+GL +
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSEYM 307
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ + G+K PNPF LASAPPT VRRA+E GWG V KT ++ V NV+ P
Sbjct: 1 MADLRSDFVGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGMEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL- 460
R + G R L NIELI+++ + +A+ + + +++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLEVNLREMKAVKRDYPDRALIASIMVPCE 114
Query: 461 ---------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
++++ +DG+ L G P + +G AV +V Y E+
Sbjct: 115 EEAWKAILPHVEETGADGIELNFGCPHGM----------AERGMGSAVGQVPEYIEM 161
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV ++ +AV VT++ +L+ A I+ D+CI+CG+C+ AC D+ +QAI +
Sbjct: 312 MTSVDQLVRRAVPNVTDWNQLNLNYVAKAKIDQDLCISCGRCFAACEDTSHQAIAMSEDR 371
Query: 548 HQAHVTDECTGCTLCLSI 565
+ + DEC C LC+++
Sbjct: 372 TFSVIDDECVACNLCVNV 389
>gi|339488342|ref|YP_004702870.1| dihydropyrimidine dehydrogenase [Pseudomonas putida S16]
gi|338839185|gb|AEJ13990.1| dihydropyrimidine dehydrogenase [Pseudomonas putida S16]
Length = 424
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M +D W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEDSWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMKDGLARWM 305
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI--TFHPETHQAH-- 551
GQAV T++ LD + VA I+ CI CG+C++AC D+ +QAI T + + A+
Sbjct: 318 GQAVGHTTDWKYLDMNYKSVAHIDQQACIGCGRCHIACEDTSHQAIASTLNADGTHAYSV 377
Query: 552 VTDECTGCTLC 562
+ +EC GC LC
Sbjct: 378 IEEECVGCNLC 388
>gi|359786715|ref|ZP_09289808.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. GFAJ-1]
gi|359296009|gb|EHK60265.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. GFAJ-1]
Length = 444
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 5/208 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SIM N++ W + E GAD +ELNL CPHGM ERGMG A GQ+P+++ ++
Sbjct: 123 LIVSIMVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTY 182
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + S+ D P VG
Sbjct: 183 WCKKHYSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAMPTVG 242
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ + V+ IA+ PI GIGGI + A +FI G+ +V
Sbjct: 243 HQ--STHGGYCGSAVKPIAMNMVAEIARDPATATLPISGIGGISTWRDAAEFISLGSGSV 300
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLK 770
Q+C+A F +V++ GL + K
Sbjct: 301 QVCTAAMLNGFRIVEEMKDGLSRWMAEK 328
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ++ VD+SV G+K PNPF LASAPPT + V RA+E GWG V KT + V N
Sbjct: 17 SVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEEPPAV-N 75
Query: 401 VSPRIVKGTTSRHLYGP--EQGSFLNIELISEKT 432
VS R S H YG E F NIELI++++
Sbjct: 76 VSSRY-----SAH-YGKNREVIGFNNIELITDRS 103
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 497 QAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH----V 552
+AV + T++ LD + +A I+ D+CI CG+CY+AC D+ +Q+I E A +
Sbjct: 339 KAVPQTTDWKHLDINFKTIAHIDQDLCIECGRCYIACEDTSHQSIAKLTEQDGARRYEVI 398
Query: 553 TDECTGCTLC 562
DEC GC LC
Sbjct: 399 EDECVGCNLC 408
>gi|338997975|ref|ZP_08636657.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. TD01]
gi|338765106|gb|EGP20056.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. TD01]
Length = 444
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 5/208 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SIM N++ W + E GAD +ELNL CPHGM ERGMG A GQ+P+++ ++
Sbjct: 123 LIVSIMVPCNEEAWAHILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVAY 182
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + S+ D P VG
Sbjct: 183 WCKKHYSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVG 242
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ P+ GIGGI + A +F+ GA +V
Sbjct: 243 HQ--STHGGYCGSAVKPIALNMVAEIARDPATAELPLSGIGGISNWRDAAEFVALGAGSV 300
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLK 770
Q+C+A F +V++ GL + K
Sbjct: 301 QVCTAAMLNGFRIVEEMKDGLSRWMAEK 328
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
S ++ VD+SV G+K PNPF LASAPPT + V RA+E GWG V KT + V N
Sbjct: 17 SVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEEPPAV-N 75
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VS R ++ + E F NIELI++++
Sbjct: 76 VSSRY----SAHYGKNREVIGFNNIELITDRS 103
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++ +AV + T++ LD + +A I+ D+CI CG+CY+AC D+ +Q+I E
Sbjct: 332 SIESFSRKAVPQTTDWKHLDINFKTIAKIDQDLCIECGRCYIACEDTSHQSIAKLTEQDG 391
Query: 550 AH----VTDECTGCTLC 562
A + DEC GC LC
Sbjct: 392 ARRYEVIEDECVGCNLC 408
>gi|104782302|ref|YP_608800.1| dihydropyrimidine dehydrogenase [Pseudomonas entomophila L48]
gi|95111289|emb|CAK16009.1| putative dihydroorotate dehydrogenase, FMN-linked, 4Fe-4S
ferredoxin-type protein [Pseudomonas entomophila L48]
Length = 424
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGTWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +VDD GL +
Sbjct: 281 QVCTAAMLHGFRIVDDMKDGLARWM 305
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 53/188 (28%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFL-NIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LIT 458
S H Q + NIELI++++ I N E +++++ LI
Sbjct: 60 Y-----SAHFGANRQVQGINNIELITDRSLEI---------NLREITQVKKDWPDRALIV 105
Query: 459 ELN--------------LKKLNSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAVQ 500
L ++ +DG+ L +G+P+R +G AV
Sbjct: 106 SLMVPCVEESWKFILPLVEATGADGIELNFGCPHGMPERG--------------MGAAVG 151
Query: 501 RVTNYTEL 508
+V Y E+
Sbjct: 152 QVPEYVEM 159
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
GQAV T++ LD + VA I+ CI CG+C++AC D+ +QAI + H
Sbjct: 318 GQAVGHTTDWKYLDMNYKSVAQIDQAACIGCGRCHIACEDTSHQAIASTLKDDGTHSYSV 377
Query: 552 VTDECTGCTLC 562
V +EC GC LC
Sbjct: 378 VEEECVGCNLC 388
>gi|99081341|ref|YP_613495.1| dihydropyrimidine dehydrogenase [Ruegeria sp. TM1040]
gi|99037621|gb|ABF64233.1| dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil
dehydrogenase (NAD+) / dihydroorotate oxidase B,
catalytic subunit [Ruegeria sp. TM1040]
Length = 434
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 139/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + + + G D +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 LIASIMVPCEEAAWKAILPRVAETGCDGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + S++ D +P P +G
Sbjct: 165 WCKQYYDKPVIVKLTPNITDIRHPARAAKAGNADAVSLINTINSITSVNLDAMSPEPMIG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + V+ I++ PI IGG+ + A +FI GA V
Sbjct: 225 GKG--THGGYCGPAVKPIAMNMVAEISRDPQTAGLPISAIGGVTTWRDAAEFIALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV++ I+GL + +KG + + D G
Sbjct: 283 QVCTAAMTYGFKVVEEMISGLSDWM-------------------DEKGYSSIE--DFRGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLDLNYVTKAKISQ 344
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G AV VT++ LD A I+ D CI CG+CY AC D+ +QAI +
Sbjct: 314 SIEDFRGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCGRCYAACEDTSHQAIEMSADRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
>gi|431803361|ref|YP_007230264.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida
HB3267]
gi|430794126|gb|AGA74321.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida
HB3267]
Length = 424
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M +D W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEDSWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPQTLGLPICGIGGIGSWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMKDGLARWM 305
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
GQAV T++ LD + VA I+ CI CG+C++AC D+ +QAI + H
Sbjct: 318 GQAVGHTTDWKYLDMNYKSVAHIDQQACIGCGRCHIACEDTSHQAIASTLQADGTHIYSV 377
Query: 552 VTDECTGCTLC 562
+ +EC GC LC
Sbjct: 378 IEEECVGCNLC 388
>gi|222086790|ref|YP_002545324.1| dihydropyrimidine dehydrogenase [Agrobacterium radiobacter K84]
gi|398376912|ref|ZP_10535093.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. AP16]
gi|221724238|gb|ACM27394.1| dihydroorotate oxidase protein [Agrobacterium radiobacter K84]
gi|397727384|gb|EJK87809.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. AP16]
Length = 437
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM +D W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCVEDAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDVRMPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPQTQGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D +
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RTLDDIIAR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVSDWQYLNLNYIAKAKIDQ 344
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+I +AV V+++ L+ A I+ D CI CG+CY+AC D+ +QAIT
Sbjct: 314 TLDDIIARAVPNVSDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNMVDGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|170721018|ref|YP_001748706.1| dihydropyrimidine dehydrogenase [Pseudomonas putida W619]
gi|169759021|gb|ACA72337.1| dihydroorotate dehydrogenase family protein [Pseudomonas putida
W619]
Length = 424
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 126/220 (57%), Gaps = 6/220 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTHCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGNWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQS 781
Q+C+A F +V+D GL + Q L+ + GQ+
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWMDQHGHQNLEAFRGQA 320
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
GQAV T++ LD + VA I+ D CI CG+C++AC D+ +QAI + H
Sbjct: 318 GQAVAHTTDWKYLDINYKSVAHIDQDACIGCGRCHIACEDTSHQAIASTLKADGTHAYSV 377
Query: 552 VTDECTGCTLC 562
+ DEC GC LC
Sbjct: 378 IEDECVGCNLC 388
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKT 432
+ L QG NIELI++++
Sbjct: 60 YSAHYGANRLV---QG-INNIELITDRS 83
>gi|126741278|ref|ZP_01756957.1| dihydropyrimidine dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126717683|gb|EBA14406.1| dihydropyrimidine dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 404
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 139/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + K E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 VIVSIMVPCEEEAWKAILPKVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKKYYSKPVIVKLTPNITDVRFPARAAKAGGGDAVSLINTINSIVSVDLDSMAPEPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI IGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARCPQTHGLPISAIGGVTTWKDAAEFMVMGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG + Q D G+
Sbjct: 283 QVCTAAMTYGFNVVKEMISGLSNWM-------------------DEKGYTSTQ--DFIGQ 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN +++ + N + + K+N D
Sbjct: 322 AVPNVTDWQYLDLNFVAK---AKINQD 345
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S +D IGQAV VT++ LD A IN D CI CG+C+ AC D+ +QAI +
Sbjct: 314 STQDFIGQAVPNVTDWQYLDLNFVAKAKINQDDCIKCGRCFAACEDTSHQAIEMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKT 432
R + G R L NIELI++++
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRS 85
>gi|332558611|ref|ZP_08412933.1| dihydropyrimidine dehydrogenase subunit B [Rhodobacter sphaeroides
WS8N]
gi|332276323|gb|EGJ21638.1| dihydropyrimidine dehydrogenase subunit B [Rhodobacter sphaeroides
WS8N]
Length = 434
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 138/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M +++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVVSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPN+T+I A+AA G AD VS INT++ + + D P P +
Sbjct: 165 WVKQHSRMPCIVKLTPNVTDIRKPAEAARRGGADAVSLINTINSITGVDIDSFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A++F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARNPETHGLPISGIGGVTTWRDAVEFMLLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + KG+ + D G+
Sbjct: 283 QVCTAAMTYGFRVVQEMISGLSDYM-----DAKGFASTA----------------DLVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNVTDWQYLNLNYVAKAQIDQ 344
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D++G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI +
Sbjct: 314 STADLVGRAVPNVTDWQYLNLNYVAKAQIDQDLCIKCGRCYAACEDTSHQAIAMSTDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+EC C LC+ +
Sbjct: 374 TVKDEECVACNLCVDV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 45/185 (24%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ ++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MANLRSDFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LI 457
G +YG ++ NIELI+++ + N E K ++ + L+
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRPLEV---------NLREIKSVKRDYPDRALV 106
Query: 458 TEL--------------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503
L +++ +DGV L G P + +G AV +V
Sbjct: 107 VSLMVPCDEESWKAILAHVEDTGADGVELNFGCPHGM----------AERGMGSAVGQVP 156
Query: 504 NYTEL 508
Y E+
Sbjct: 157 EYIEM 161
>gi|449439483|ref|XP_004137515.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Cucumis sativus]
gi|449520940|ref|XP_004167490.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Cucumis sativus]
Length = 424
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 128/227 (56%), Gaps = 10/227 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA E+N SCPHGM ER MG A GQD ++ +
Sbjct: 153 ILIASIMEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVC 212
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + IP + K+TPNIT+I+ A+ A + +G++AINT+ +M + P P V
Sbjct: 213 GWINAKATIPVWAKMTPNITDISQPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCV 272
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP------NFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM ++ + GIGG+++ A +FI
Sbjct: 273 --EGYSTPGGYSSKAVHPIALGKVLSIAKMMKAEFNDGDYSLSGIGGVETGGDAAEFILL 330
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPP 783
GA+ VQ+C+ V + VV LQ + L + + ++ + G S P
Sbjct: 331 GANTVQVCTGVMMHGYGVVKKLCAELQDFMKLHNFSSIEDFRGASLP 377
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 48 DLSVTVNGLNMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
+ G+ + G E NIELIS++ I F+ + + + +++ E
Sbjct: 108 RLRADSNGSAKGQIIGWE-----NIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEY 162
Query: 461 N-------LKKLNSDGV-------SLQNGLPKRQINTPV 485
N + ++ GV S +G+P+R++ V
Sbjct: 163 NKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAV 201
>gi|409437961|ref|ZP_11265060.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Rhizobium mesoamericanum STM3625]
gi|408750427|emb|CCM76220.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Rhizobium mesoamericanum STM3625]
Length = 437
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSITSVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDAKGHR---------------------SLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVSDWQYLNLNYIAKAKIDQ 344
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV V+++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDITGRAVPNVSDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEK 588
H + +EC GC LC+++ T + +L K+T K
Sbjct: 374 HFEVMEEECVGCNLCVNVCPVEGCITLEQLPAGDLDKRTGK 414
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|89055203|ref|YP_510654.1| dihydropyrimidine dehydrogenase [Jannaschia sp. CCS1]
gi|88864752|gb|ABD55629.1| dihydroorotate oxidase B, catalytic subunit / dihydrouracil
dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase
(NADP+) [Jannaschia sp. CCS1]
Length = 434
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 27/263 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 IIVSIMVPCEEAAWKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+IT A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYSKPVIVKLTPNITDITKPAAAAKRGGADAVSLINTINSITSVNLDTMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + VS IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMSMVSEIARSPETHGLPISGIGGVTTWRDAAEFMTLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ I+GL L K L D G+
Sbjct: 283 QVCTAAMTYGFKIVEEMISGLSQFLDEKGMTLD----------------------DLVGR 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 321 AVPNVTDWQYLNLNYVAKAQINQ 343
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%)
Query: 486 ETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHP 545
E +++ D++G+AV VT++ L+ A IN D CI CG+CY AC D+ +QAI+
Sbjct: 309 EKGMTLDDLVGRAVPNVTDWQYLNLNYVAKAQINQDDCIKCGRCYAACEDTSHQAISMSA 368
Query: 546 ETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEK 588
+ + EC C LC+++ T + D E+ +T K
Sbjct: 369 DRVFEVIDAECVACNLCVNVCPVENCITMVEMDAGEVDPRTGK 411
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+ PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLTSNFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
G +YG ++ NIELI+++ + N E K+++ +
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRDLYT---------NLEEIKRVKAD 99
>gi|340777860|ref|ZP_08697803.1| dihydropyrimidine dehydrogenase subunit B [Acetobacter aceti NBRC
14818]
Length = 422
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VIVSLMVPCEEEKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPNITNI A+AA G AD VS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNITNILMPARAAKRGGADAVSLINTIQSVIGVDLDQMAPMPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
L T+GG G A +P+ L+ + IA+ PI GIGGI S A +F+ G+ +
Sbjct: 223 --GLGTHGGYCGPAVKPIALRMIGEIARDPEMAGMPISGIGGIGSWRDAAEFLAMGSTTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMADGLSAWM 305
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
S+ DV G+A+++ + +L+ K + +A I+ D C++CG C++AC D+ +QAI E
Sbjct: 312 SIDDVSGRALKQFVPWNQLNMKFKTIANIDQDACVSCGLCHIACEDTSHQAIAKTRVDGE 371
Query: 547 THQAHVTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 372 RHYEVIEEECVGCNLCAHV 390
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G++ PNPF LASAPPT VRRAFE GWG V KT + V NVS R
Sbjct: 1 MADLTTVFAGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKK 464
S G NIELIS++ +A+ + + +L+ +K
Sbjct: 60 Y----GSLDFNGARMIGLNNIELISDRPLATNIAEIKAVKRDYPDRAVIVSLMVPCEEEK 115
Query: 465 L----------NSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+DG+ L G P +S ++ +G AV +V Y E+
Sbjct: 116 WKAILPIVEETGADGIELNFGCPHG---------MSERN-MGAAVGQVPEYVEM 159
>gi|86358877|ref|YP_470769.1| dihydropyrimidine dehydrogenase [Rhizobium etli CFN 42]
gi|86282979|gb|ABC92042.1| probable dihydroorotate oxidase protein [Rhizobium etli CFN 42]
Length = 437
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL GW + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLS-----------GW--------MDEKGH--RSLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+ N +++ + N + + + +
Sbjct: 322 AVSNVTDWQYLNLNYVAKAKIDQ 344
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDITGRAVSNVTDWQYLNLNYVAKAKIDQDACIKCGRCHIACEDTSHQAITSVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|209550605|ref|YP_002282522.1| dihydropyrimidine dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424917135|ref|ZP_18340499.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|209536361|gb|ACI56296.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392853311|gb|EJB05832.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 437
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKSILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPIITKLTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSDWM-------------------DEKGH--RSLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITNVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L NIELI+++ + N E K+++ N L
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMNWPDRAL 105
Query: 457 ITELN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
I + +++ +DGV L G P + +G AV +V
Sbjct: 106 IASIMVPCEEQAWKSILPLVEETGADGVELNFGCPHGM----------SERGMGSAVGQV 155
Query: 503 TNYTEL 508
Y E+
Sbjct: 156 PEYIEM 161
>gi|451988176|ref|ZP_21936315.1| Dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas aeruginosa
18A]
gi|451754152|emb|CCQ88838.1| Dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas aeruginosa
18A]
Length = 424
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVQGINNIELITDRS 83
>gi|152986422|ref|YP_001345936.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa PA7]
gi|452880696|ref|ZP_21957626.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
VRFPA01]
gi|150961580|gb|ABR83605.1| probable oxidoreductase [Pseudomonas aeruginosa PA7]
gi|452182914|gb|EME09932.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
VRFPA01]
Length = 424
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 120/211 (56%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTHCSLPVIVKLTPNITDIRQSARAAQRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F +V+D GL + + Q
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWMDSQGYQ 311
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ + + D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDS--QGYQRLADFSGAAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLC 388
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA+E GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVQGINNIELITDRS 83
>gi|296386938|ref|ZP_06876437.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa PAb1]
gi|416874963|ref|ZP_11918456.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
152504]
gi|334842516|gb|EGM21122.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
152504]
Length = 424
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL R +++ LS D G AV T++ LD QV+A I+ D CI CG+C++
Sbjct: 297 MQDGL-ARWMDSHGYQRLS--DFSGGAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QAI P TH V D EC GC LC
Sbjct: 354 ACEDTSHQAIASLPRADGTHHYEVIDAECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RA++ GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H +GP + NIELI++++
Sbjct: 60 Y-----SAH-FGPNRQVQGINNIELITDRS 83
>gi|150397561|ref|YP_001328028.1| dihydropyrimidine dehydrogenase [Sinorhizobium medicae WSM419]
gi|150029076|gb|ABR61193.1| dihydroorotate dehydrogenase family protein [Sinorhizobium medicae
WSM419]
Length = 437
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 136/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + ++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAARAGGTDAVSLINTINSITGVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDTETHGLPISGIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDAKGHR---------------------TLDDISGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N IT+ + +
Sbjct: 322 AVPNVTDWQYLNLNYITKAKIDQ 344
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDISGRAVPNVTDWQYLNLNYITKAKIDQDACIKCGRCHIACEDTSHQAITQLVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ ++ N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYV---------NLREMKQVKMN 99
>gi|241205971|ref|YP_002977067.1| dihydropyrimidine dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859861|gb|ACS57528.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 437
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI++I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ G+ V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGSGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RSLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT
Sbjct: 314 SLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNFVDGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H V +EC GC LC+S+
Sbjct: 374 HFEVVDEECVGCNLCVSV 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|84514681|ref|ZP_01002045.1| dihydropyrimidine dehydrogenase [Loktanella vestfoldensis SKA53]
gi|84511732|gb|EAQ08185.1| dihydropyrimidine dehydrogenase [Loktanella vestfoldensis SKA53]
Length = 434
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 139/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W ++ + ++ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 MIVSIMVPCEEQAWKDILPRVQETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYDKPVIVKLTPNITDIRQPAAAAMRGGADAVSLINTINSITSVNLDTMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ I GIGG+ + A ++I G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALSMVSEIARHPETRGLAISGIGGVTTWRDAAEYISLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV F +V + I+G L GW + T V Q G+
Sbjct: 283 QVCTAVMTYGFKIVQEMISG-----------LSGWMDEKGYTSVEQ----------VVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
AIPN ++K + N + + K+N D
Sbjct: 322 AIPNVTDWKYLNLNYVAK---AKINQD 345
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV+ V+G+A+ VT++ L+ A IN D CI CG+CY AC D+ +QAI +
Sbjct: 314 SVEQVVGRAIPNVTDWKYLNLNYVAKAKINQDDCIKCGRCYAACEDTSHQAIAMSADRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ EC C LC+ +
Sbjct: 374 TVIDAECVACNLCVDV 389
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+K PNPF LASAPPT VRRAF+ GWG V KT + V NV+
Sbjct: 1 MADLTTNFLGIKSPNPFWLASAPPTDKEYNVRRAFDAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDR 84
>gi|398844037|ref|ZP_10601145.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM84]
gi|398254961|gb|EJN40010.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM84]
Length = 424
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCEEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMKDGLARWM 305
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
GQAV T++ LD + VA I+ D CI CG+C++AC D+ +QAI + H
Sbjct: 318 GQAVAHTTDWKYLDINYKSVAHIDQDACIGCGRCHIACEDTSHQAIASTLKADGTHAYSV 377
Query: 552 VTDECTGCTLC 562
+ +EC GC LC
Sbjct: 378 IEEECVGCNLC 388
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S++ G+K PNPF LASAPPT + V RA+E GWG V KT + NVS R
Sbjct: 1 MADLSIQFAGIKSPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFL-NIELISEKT 432
S H Q + NIELI++++
Sbjct: 60 Y-----SAHYGANRQVQGINNIELITDRS 83
>gi|357138201|ref|XP_003570686.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Brachypodium distachyon]
Length = 419
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI SIM YNK W EL ++ E++G DALE+N SCPHGM ER MG A GQD ++ +S
Sbjct: 149 ILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCGLLEEVS 208
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ +P + K+TPNIT+IT+ A+ A + +GV+AINT+ +M ++ P P V
Sbjct: 209 GWINEKATVPVWAKMTPNITDITEPARVALKSGCEGVAAINTIMSVMGINLKTLRPEPCV 268
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFPIL-GIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V IA++ FP+ L IGG+++ + A +FI G
Sbjct: 269 --EGYSTPGGYSARAVHPIALAKVMQIARLMKEEFPDGQSLSAIGGVETGNDAAEFILLG 326
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A VQ+C+ V + +V T LQ +
Sbjct: 327 ADTVQVCTGVMMHGYGLVKKLCTELQDFM 355
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 44 DLSVRVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAGKVINVTPRYA 103
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
+ G + G + NIELIS++ F+ + + + +++ E
Sbjct: 104 RLRAEPNGAAKSRIIG-----WQNIELISDRPLETMLKEFKQLKKEYPDRILIGSIMEEY 158
Query: 461 N-------LKKLNSDGV-------SLQNGLPKRQINTPV 485
N ++++ GV S +G+P+R++ V
Sbjct: 159 NKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAV 197
>gi|356520655|ref|XP_003528976.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Glycine max]
Length = 424
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 119/210 (56%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA E+N SCPHGM ER MG A GQD ++ +
Sbjct: 153 ILIASIMEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERKMGAAVGQDCALLEEVC 212
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + IP + K+TPNIT+I+ A+ A +GVSAINT+ +M ++ + P P V
Sbjct: 213 GWINAKATIPVWAKMTPNITDISQPARIALSSGCEGVSAINTIMSVMGINLNTLRPEPCV 272
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM N+ + IGG+++ A +FI
Sbjct: 273 --EGYSTPGGYSARAVHPIALGKVMSIAKMMKSEFDSENYTLSAIGGVETGGDAAEFILL 330
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA+ VQ+C+ V + +V LQ +
Sbjct: 331 GANTVQVCTGVMMHGYGLVKKLCLELQDFM 360
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL+ PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 48 DLSVTVNGLRMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
+ G+ + G E NIELIS++ F+ + + + +++ E
Sbjct: 108 RLRAGANGSAKGEIIGWE-----NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY 162
Query: 461 N-------LKKLNSDGV-------SLQNGLPKRQINTPV 485
N + ++ GV S +G+P+R++ V
Sbjct: 163 NKAAWEELIDRVEQTGVDAFEINFSCPHGMPERKMGAAV 201
>gi|254486347|ref|ZP_05099552.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
GAI101]
gi|214043216|gb|EEB83854.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
GAI101]
Length = 425
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 140/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 96 MVVSLMVPCEEEPWKYILPLVEETGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV++S ++P VKLTPNI +I A+AA G AD VS INT++ + S+ D P P +
Sbjct: 156 WVKASTRMPVIVKLTPNIADIRKPAEAALRGGADAVSLINTINSITSVDLDLFAPEPTID 215
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 216 GKG--AHGGYCGPAVKPIALNMVAEIARDPGLSQVPISGIGGVTTWRDAAEFMALGAGNV 273
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV F +V + I+GL L K T V Q + +
Sbjct: 274 QVCTAVMTYGFKIVQEMISGLSEYLDDKGM-----------TSVDQLVR----------R 312
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN ++ ++ N + + K+N D
Sbjct: 313 AVPNVTDWNQLNLNYVAK---AKINED 336
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV ++ +AV VT++ +L+ A IN+D+CI+CG+C+ AC D+ +QAI +
Sbjct: 303 MTSVDQLVRRAVPNVTDWNQLNLNYVAKAKINEDLCISCGRCFAACEDTSHQAIAMSEDR 362
Query: 548 HQAHVTDECTGCTLCLSI 565
+ + EC C LC+++
Sbjct: 363 TFSVIDAECVACNLCVNV 380
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 354 GLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI--VKGTTS 411
G+K PNPF LASAPPT VRRAFE GWG V KT + +V PR + G
Sbjct: 2 GIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGIDPPVVNVNGPRYGAIYGADR 61
Query: 412 RHLYGPEQGSFLNIELISEK 431
R L NIELI+++
Sbjct: 62 RLL------GLNNIELITDR 75
>gi|424885677|ref|ZP_18309288.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393177439|gb|EJC77480.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 437
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKSILPLVEETNADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM-------------------DEKGH--RSLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITNVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L NIELI+++ + N E K+++ N L
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMNWPDRAL 105
Query: 457 ITELN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
I + +++ N+DG+ L G P + +G AV +V
Sbjct: 106 IASIMVPCEEQAWKSILPLVEETNADGIELNFGCPHGM----------SERGMGSAVGQV 155
Query: 503 TNYTEL 508
Y E+
Sbjct: 156 PEYIEM 161
>gi|307106864|gb|EFN55109.1| hypothetical protein CHLNCDRAFT_31559 [Chlorella variabilis]
Length = 429
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 127/210 (60%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM YN+ W EL ++ ++AG DA E+N SCPHGM ER MG+A GQD E++ +
Sbjct: 158 VLIASIMEEYNQAAWEELIERCQEAGVDAFEINFSCPHGMPERRMGMAMGQDCELLHEVC 217
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + IP + K+TPN+T+I+ A+ A +G++AINT++ +M ++ D P P V
Sbjct: 218 GWINAKSTIPVWAKMTPNVTDISMPARTALAAGCEGIAAINTITSVMGINLDTLRPEPCV 277
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFP-----ILGIGGIDSADVALQFIQA 737
+ TT GG S A +P+ L SIA+M +FP + G+GG+++ A +FI
Sbjct: 278 --EGHTTPGGYSSRAVKPIALAKCMSIAQMMRHDFPHSAASLSGLGGVNTGRDAAEFILL 335
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
G++ VQ+C+ V + ++ GLQ +
Sbjct: 336 GSNTVQVCTGVMLYGYPLIKKLCGGLQAFM 365
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 17/148 (11%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
++VE+ GLK PNPF + S PP T +++++AFE GWG + KT SL V NV+PR K
Sbjct: 58 LAVEVNGLKLPNPFVIGSGPPGTNYAVMKKAFEEGWGAVIAKTVSLDSSKVINVTPRYAK 117
Query: 408 GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN------ 461
+S G E + NIELIS++ + F+ + + + +++ E N
Sbjct: 118 MKSSD---GKEVIGWENIELISDRPLEVMLEEFKRLKAEFPDRVLIASIMEEYNQAAWEE 174
Query: 462 -LKKLNSDGV-------SLQNGLPKRQI 481
+++ GV S +G+P+R++
Sbjct: 175 LIERCQEAGVDAFEINFSCPHGMPERRM 202
>gi|116626688|ref|YP_828844.1| dihydropyrimidine dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116229850|gb|ABJ88559.1| dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil
dehydrogenase (NAD+) / dihydroorotate oxidase B,
catalytic subunit [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W ++ K++E AGAD LELN CPHGM ERGMG A GQ P+ I+
Sbjct: 101 VIASLMVESTREAWHDIVKRSEDAGADGLELNFGCPHGMSERGMGAAVGQVPDYSCMITE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ + P VKLTPNIT+I +A+AA G+AD +SAINT++ + + D P P VG
Sbjct: 161 WVKEVARTPVLVKLTPNITDIRAVARAAKRGRADALSAINTINSITGIDLDTFTPRPNVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K T++GG G A +P+ L V IA PI GIGGI A +FI G VQ
Sbjct: 221 GK--TSHGGYCGPAVKPIALHLVQQIASDPAVGLPISGIGGIGGWREAAEFILLGCGTVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A + F +V+D I GL +
Sbjct: 279 VCTAAMHYGFRIVEDMIDGLSNWM 302
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S G++ PNPF LAS PPT + RAF+ GWG AV KT + + NVS R
Sbjct: 1 MADLSTNFAGIRCPNPFWLASGPPTNCGEQIMRAFDAGWGGAVWKTIG---EPIVNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+S G NIELIS++
Sbjct: 58 Y----SSVDWNGQRMMGLNNIELISDR 80
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETH 548
+++D G +V RVT++ LD ++VA IN D CI C CY+AC D +Q I H + H
Sbjct: 309 TIEDFRGLSVPRVTDWKHLDLNYKIVARINRDKCIGCDLCYVACWDGAHQCI--HLDGH 365
>gi|260575576|ref|ZP_05843574.1| dihydroorotate dehydrogenase family protein [Rhodobacter sp. SW2]
gi|259022219|gb|EEW25517.1| dihydroorotate dehydrogenase family protein [Rhodobacter sp. SW2]
Length = 432
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 141/263 (53%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M +++ W + + E AD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVISLMVPCDEESWKGILARIEDTEADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ ++P VKLTPNI++I A+AA G AD VS INT++ + S++ D P P +
Sbjct: 165 WVKQHSRMPCIVKLTPNISDIRKPAEAAKRGGADAVSLINTINSITSVNLDDFAPEPMID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARHPATRGLPISGIGGVSTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV F +V + I+GL + +KG + D G+
Sbjct: 283 QVCTAVMTYGFKIVSEMISGLSDYM-------------------DRKGFASVD--DLVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQFLNLNYVTKAQIDQ 344
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ +++ G+K PNPF LASAPPT + V RAFE GWG V KT L V NVS P
Sbjct: 1 MANLASTFIGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGLDGPPVVNVSGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN 461
R + G R L NIELI+++ + +A+ + + +L+ +
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLQVNLDEIKAVKRKWRDRALVISLMVPCD 114
Query: 462 ----------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
++ +DGV L G P + +G AV +V Y E+
Sbjct: 115 EESWKGILARIEDTEADGVELNFGCPHGM----------AERGMGSAVGQVPEYIEM 161
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV D++G+AV VT++ L+ A I+ CI CG+C++AC D+ +QAI PE
Sbjct: 314 SVDDLVGRAVPNVTDWQFLNLNYVTKAQIDQTSCIKCGRCHIACEDTSHQAIAVSPERVF 373
Query: 550 AHVTDECTGCTLCLSI 565
++C C LC+ +
Sbjct: 374 TVKDEDCVACNLCVDV 389
>gi|147770516|emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]
Length = 401
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM Y+K W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 131 ILIASIMEEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVC 190
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ A +GVSAINT+ +M ++ + P P V
Sbjct: 191 GWINAKATVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCV 250
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-----PNFPILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V SIAKM ++ + GIGG+++ A +FI G
Sbjct: 251 --EGYSTPGGYSCKAVHPIALGKVMSIAKMMKAEFGEDYSLSGIGGVETGGDAAEFILLG 308
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS 771
A+ VQ+C+ V + +V + L+ + + +
Sbjct: 309 ANTVQVCTGVMMHGYGLVKKLCSELKDFMKMHN 341
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 324 EKNNLTVPDKPCLPKFMSHIDLV-DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENG 382
+K +L P + F S D+SV + GL PNPF + S PP T ++++RAF+ G
Sbjct: 2 KKQSLARPSRVAFRVFASEGQAEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEG 61
Query: 383 WGFAVTKTFSLQKDMVTNVSPRIVK------GTTSRHLYGPEQGSFLNIELISEKTAFIF 436
WG + KT SL V NV+PR + G+ + G E NIELIS++
Sbjct: 62 WGAVIAKTVSLDAAKVINVTPRYARLRVGANGSAKGQIIGWE-----NIELISDRPLETM 116
Query: 437 FFLFQAIPN-----------FGEYKKIR-ENLITELNLKKLNSDGVSLQ--NGLPKRQIN 482
F+ + EY K E LI + +++ ++ +G+P+R++
Sbjct: 117 LKEFKQLKEEYPDRILIASIMEEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMG 176
Query: 483 TPV 485
V
Sbjct: 177 AAV 179
>gi|86137294|ref|ZP_01055871.1| dihydropyrimidine dehydrogenase [Roseobacter sp. MED193]
gi|85825629|gb|EAQ45827.1| dihydropyrimidine dehydrogenase [Roseobacter sp. MED193]
Length = 434
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 139/267 (52%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + K E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 VIVSIMVPCEEEAWKAILPKVEATGADGIELNFGCPHGMAERGMGAAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKKYYSKPVIVKLTPNITDVRFPARAAKAGGGDAVSLINTINSIVSVDLDQMAPEPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + V+ IA+ + PI IGG+ + A +F+ GA V
Sbjct: 225 GKG--THGGYCGPAVKPIAMNMVAEIARCPETHDLPISAIGGVTTWKDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + +KG + Q D G
Sbjct: 283 QVCTAAMTYGFNVVKEMISGLSNWM-------------------DEKGYTSTQ--DFIGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN +++ + N I + K+N D
Sbjct: 322 AVPNVTDWQYLDLNYIAK---AKINQD 345
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ E G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKT 432
R + G R L NIELI++++
Sbjct: 61 RYGAIFGADRRLL------GLNNIELITDRS 85
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S +D IG AV VT++ LD A IN D CI+CG+C+ AC D+ +QAI +
Sbjct: 314 STQDFIGMAVPNVTDWQYLDLNYIAKAKINQDDCISCGRCFAACEDTSHQAIEMSADRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 TVKDDECVACNLCVNV 389
>gi|399036977|ref|ZP_10733915.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF122]
gi|398065437|gb|EJL57070.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF122]
Length = 437
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + +++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSITAVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDAKGHR---------------------NLDDITGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVSDWQYLNLNYIAKAKIDQ 344
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV V+++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 NLDDITGRAVPNVSDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEK 588
H + +EC GC LC+++ T + +L K+T K
Sbjct: 374 HFEVMEEECVGCNLCVNVCPVENCITMEQLPVGDLDKRTGK 414
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|417099681|ref|ZP_11959876.1| dihydropyrimidine dehydrogenase protein [Rhizobium etli CNPAF512]
gi|327192567|gb|EGE59517.1| dihydropyrimidine dehydrogenase protein [Rhizobium etli CNPAF512]
Length = 437
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G +D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRRPARAAKAGGSDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V + ITGL +
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM 307
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AVQ VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT +
Sbjct: 314 TLDDITGRAVQNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|406911574|gb|EKD51341.1| dihydropyrimidine dehydrogenase [uncultured bacterium]
Length = 398
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 9/203 (4%)
Query: 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGM--GLACGQDPEMVRNISLWVRSSVKI 633
+++W E++K+ + +GA ALE+N+SCPHG G M G+A GQDP+ I+ WV+S I
Sbjct: 115 RENWQEIAKRCQDSGAQALEINVSCPHG-GATHMPPGMAIGQDPDTTARITGWVKSVATI 173
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVGTKKLTTYG 692
P VKLTPN+ +I + AA AD +SAINTV + ++ D P P+VG +T G
Sbjct: 174 PVIVKLTPNVADIVSVGIAAQNAGADAISAINTVQSIAGINLDTFTPQPSVGL--YSTAG 231
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQD 752
G+SG A PM L AV+ +A+ P++GIGG+ A++FI GA VQIC+AV
Sbjct: 232 GLSGLAIHPMALNAVARLAQGV-GLPLIGIGGVSDWRSAIEFIALGASLVQICTAVMING 290
Query: 753 FTVVDDYITGLQTLLYLKSTQLK 775
+ ++D GL T YL++ LK
Sbjct: 291 YGIIDQLKEGLAT--YLRNKSLK 311
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 353 CGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSR 412
CGL NPF LA+ PPT + +M+ RAF+ GWG AVTKT L + + SPR+ T
Sbjct: 6 CGLTLQNPFMLAAGPPTASGAMISRAFDRGWGGAVTKTIFLDSERTLSPSPRLQVLRTHS 65
Query: 413 HLYGPEQGSFLNIELISEK 431
P G F NIE+ S +
Sbjct: 66 SRTSPIYG-FRNIEMGSTR 83
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 448 EYKKIRENLITELNLKKLNSDGV--SLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
E+ + +L+ +N G+ L+ GL N ++ IL ++ G+A+ ++ +
Sbjct: 271 EFIALGASLVQICTAVMINGYGIIDQLKEGLATYLRNKSLKDILEIR---GRALAQLEDI 327
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE--CTGCTLCL 563
L N +VVA I+++ C CG+C C D+G QAIT A + D+ CTGC LC
Sbjct: 328 ITLCNAPRVVAQIDNETCSLCGQCVSLCQDAGQQAIT----QGTAVMIDKETCTGCGLCA 383
Query: 564 SI 565
++
Sbjct: 384 AM 385
>gi|149915521|ref|ZP_01904047.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
AzwK-3b]
gi|149810413|gb|EDM70256.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
AzwK-3b]
Length = 434
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 141/264 (53%), Gaps = 28/264 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M N+D W + ++ + G D +ELN CPHGM ERGMG A GQ PE V+ ++
Sbjct: 105 LIASLMVPVNEDSWKSILERVIETGCDGVELNFGCPHGMSERGMGSAVGQVPEYVQQVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + +P VKLTPNI +I A+AA +G AD VS INT++ + S+ D +P P +
Sbjct: 165 WCKKHSDLPVIVKLTPNIADIRKPAQAAKDGGADAVSLINTINSITSVDLDLFSPEPMID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN---FPILGIGGIDSADVALQFIQAGAHA 741
+ +GG G A +P+ L V+ IA+ PN PI GIGG+ + A +F+ GA
Sbjct: 225 GQG--AHGGYCGPAVKPIALNMVAEIAR-DPNLRGLPISGIGGVTTWRDAAEFMALGAGN 281
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
VQ+C+A F +V + I+GL + +KG + + G
Sbjct: 282 VQVCTAAMTYGFKIVQEMISGLSQYM-------------------DEKGFAS--IDELVG 320
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
+A+PN ++ + N +T+ + +
Sbjct: 321 RAVPNVVNWQDLNLNYVTKARIDQ 344
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ +++G+AV V N+ +L+ A I+ D CI CG+CY AC D+ +QAI+ +
Sbjct: 314 SIDELVGRAVPNVVNWQDLNLNYVTKARIDQDACIKCGRCYAACEDTSHQAISMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ EC C LC+++
Sbjct: 374 EVIDAECVACNLCVNV 389
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ ++ G+K PNPF LASAPPT VRRAFE GWG V KT V NV+ P
Sbjct: 1 MANLETTFVGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|297734363|emb|CBI15610.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM Y+K W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 96 ILIASIMEEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVC 155
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ A +GVSAINT+ +M ++ + P P V
Sbjct: 156 GWINAKATVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCV 215
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-----PNFPILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V SIAKM ++ + GIGG+++ A +FI G
Sbjct: 216 --EGYSTPGGYSCKAVHPIALGKVMSIAKMMKAEFGEDYSLSGIGGVETGGDAAEFILLG 273
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS 771
A+ VQ+C+ V + +V + L+ + + +
Sbjct: 274 ANTVQVCTGVMMHGYGLVKKLCSELKDFMKMHN 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 25/149 (16%)
Query: 357 FPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK------GTT 410
PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR + G+
Sbjct: 1 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRVGANGSA 60
Query: 411 SRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN-----------FGEYKKIR-ENLIT 458
+ G E NIELIS++ F+ + EY K E LI
Sbjct: 61 KGQIIGWE-----NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDKAAWEELID 115
Query: 459 ELNLKKLNSDGVSLQ--NGLPKRQINTPV 485
+ +++ ++ +G+P+R++ V
Sbjct: 116 RVEQTGIDALEINFSCPHGMPERKMGAAV 144
>gi|225456230|ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA [Vitis vinifera]
Length = 421
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM Y+K W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 151 ILIASIMEEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVC 210
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ A +GVSAINT+ +M ++ + P P V
Sbjct: 211 GWINAKATVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCV 270
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-----PNFPILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V SIAKM ++ + GIGG+++ A +FI G
Sbjct: 271 --EGYSTPGGYSCKAVHPIALGKVMSIAKMMKAEFGEDYSLSGIGGVETGGDAAEFILLG 328
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS 771
A+ VQ+C+ V + +V + L+ + + +
Sbjct: 329 ANTVQVCTGVMMHGYGLVKKLCSELKDFMKMHN 361
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 46 DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 105
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN-----------FGEY 449
+ G+ + G E NIELIS++ F+ + EY
Sbjct: 106 RLRVGANGSAKGQIIGWE-----NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY 160
Query: 450 KKIR-ENLITELNLKKLNSDGVSLQ--NGLPKRQINTPV 485
K E LI + +++ ++ +G+P+R++ V
Sbjct: 161 DKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAV 199
>gi|110634405|ref|YP_674613.1| dihydropyrimidine dehydrogenase [Chelativorans sp. BNC1]
gi|110285389|gb|ABG63448.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Chelativorans sp. BNC1]
Length = 437
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E+ AD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIVSLMVPCEEEAWKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYVEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ G D VS INT++ + ++ D P P +
Sbjct: 165 WCKQHTRMPVITKLTPNITDIRKPARAAHAGGTDAVSLINTINSITAVDLDSFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K T+GG G A +P+ L V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 SKG--THGGYCGPAVKPIALNMVAEIARDPETRGLPISGIGGITTWRDAAEFLALGAGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ + G LK W + +KG D G+
Sbjct: 283 QVCTAAMTYGFKIVEEMVEG-----------LKNW--------MDEKGHAT--LDDIIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N IT+ + +
Sbjct: 322 AVPNVTDWQYLNLNYITKARIDQ 344
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRSNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L F NIELI+++ ++ N E K+++ N L
Sbjct: 61 RYGAIWGADRRLL------GFNNIELITDRDLYL---------NLTEIKQVKRNWPDRAL 105
Query: 457 ITELN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
I L +++ +DG+ L G P +S + +G AV +V
Sbjct: 106 IVSLMVPCEEEAWKAILPLVEETEADGIELNFGCPHG---------MSERG-MGSAVGQV 155
Query: 503 TNYTEL 508
Y E+
Sbjct: 156 PEYVEM 161
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+IG+AV VT++ L+ A I+ D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDIIGRAVPNVTDWQYLNLNYITKARIDQDLCIKCGRCHIACEDTSHQAITSVVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
+ +EC GC LC+++
Sbjct: 374 YFEVKEEECVGCNLCVNV 391
>gi|190893106|ref|YP_001979648.1| dihydropyrimidine dehydrogenase [Rhizobium etli CIAT 652]
gi|190698385|gb|ACE92470.1| dihydropyrimidine dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 437
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V + ITGL +
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM 307
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AVQ VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT +
Sbjct: 314 TLDDITGRAVQNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNVVNGLR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKMN 99
>gi|90418415|ref|ZP_01226327.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
gi|90338087|gb|EAS51738.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
Length = 447
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W ++ E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 MIVSLMVPCEEAPWQKILALVEETGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVAR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + K+P VKLTPNIT+I A+AA G AD VS INT+S ++S+ D P P +
Sbjct: 164 WCKQHSKLPVIVKLTPNITDIRFPARAARRGGADAVSLINTISSIVSIDLDNFAPTPTID 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ P+ GIGGI + A +FI G V
Sbjct: 224 GKG--SHGGYCGPAVKPIALNMVAEIARDPETIGMPMSGIGGITTWRDAAEFIALGCGTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + +GL + +KG + + D G+
Sbjct: 282 QVCTAAMTYGFKVVKEMSSGLSDWM-------------------DEKGYASIE--DFRGR 320
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N +T+ + +
Sbjct: 321 AAPNVTDWQYLNLNYVTKARIDQ 343
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G+A VT++ L+ A I+ D CI+CG+C++AC D+ +QAIT + +
Sbjct: 313 SIEDFRGRAAPNVTDWQYLNLNYVTKARIDQDKCISCGRCHIACEDTSHQAITSMLDGIR 372
Query: 550 AH--VTDECTGCTLCLSI 565
+ +EC GC LC+ +
Sbjct: 373 KFEVIDEECVGCNLCVDV 390
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ +++ G+ PNPF LASAPPT V+RAFE GWG V KT +V
Sbjct: 1 MANLATNFLGISSPNPFWLASAPPTDKEYNVQRAFEQGWGGVVWKTLGEDPPVVN----- 55
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
V G +YGP++ NIELI+++
Sbjct: 56 -VNGPRYGAIYGPDRRLLGLNNIELITDR 83
>gi|83951608|ref|ZP_00960340.1| dihydroorotate dehydrogenase family protein [Roseovarius
nubinhibens ISM]
gi|83836614|gb|EAP75911.1| dihydroorotate dehydrogenase family protein [Roseovarius
nubinhibens ISM]
Length = 434
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M N++ W + + G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 105 LIASLMVPVNEESWKRILEAVAGTGCDGVELNFGCPHGMSERGMGSAVGQVPEYVGQVAE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W ++ +P VKLTPNIT+I A+AA + AD VS INT++ + S++ D +P P+V
Sbjct: 165 WCKTYTDLPVIVKLTPNITDIRKPAQAAKQSGADAVSLINTINSITSVNLDSFSPEPSV- 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
L +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 224 -DGLGAHGGYCGPAVKPIALNMVAEIARDPATAGLPISGIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F VV + I+GL +
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSQYM 307
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV +++G+AV +V N+ +L+ A I+ D CI CG+CY AC D+ +QAI+ P+
Sbjct: 314 SVDELVGRAVPQVVNWQDLNLNYIAKARIDQDACIKCGRCYAACEDTSHQAISMSPDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 374 EVKDDECVACNLCVNV 389
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ G+K PNPF LASAPPT VRRAFE GWG V KT V NV+ P
Sbjct: 1 MADLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEAGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN 461
R + G R L NIELI+++ + + + + +L+ +N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRPLEVNLEEMTRVKKDYPDRALIASLMVPVN 114
Query: 462 ----------LKKLNSDGVSLQNGLP----KRQINTPVETILSVKDVIGQAVQRVTNYTE 507
+ DGV L G P +R + + V V + +GQ + YT+
Sbjct: 115 EESWKRILEAVAGTGCDGVELNFGCPHGMSERGMGSAVG---QVPEYVGQVAEWCKTYTD 171
Query: 508 L 508
L
Sbjct: 172 L 172
>gi|254510639|ref|ZP_05122706.1| dihydropyrimidine dehydrogenase [NADP+] [Rhodobacteraceae bacterium
KLH11]
gi|221534350|gb|EEE37338.1| dihydropyrimidine dehydrogenase [NADP+] [Rhodobacteraceae bacterium
KLH11]
Length = 434
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 28/264 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M +D W + + + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASLMVPCEEDAWKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYDRPVIVKLTPNITDIRKPAAAARNGGADAVSLINTINSITSVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ PI GIGG+ + A +FI G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALSMVSEIARAEATHGLPISGIGGVTTWRDAAEFISLGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDK-EG 801
Q+C+A F ++D+ GL + +KG Y D+ G
Sbjct: 283 QVCTAAMTYGFKIIDELTAGLSEWM-------------------DEKG---YSSVDEVVG 320
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
+A+PN +++ + N + + + +
Sbjct: 321 RAVPNVTDWQYLNLNYVAKAKIDQ 344
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV +V+G+AV VT++ L+ A I+ D CI CG+CY AC D+ +QAI+ E
Sbjct: 314 SVDEVVGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCGRCYAACEDTSHQAISMSAERVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 EVIDEECVACNLCVDV 389
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+ PNP+ LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLTTNFLGISSPNPYWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDR 84
>gi|227823015|ref|YP_002826987.1| dihydropyrimidine dehydrogenase [Sinorhizobium fredii NGR234]
gi|227342016|gb|ACP26234.1| dihydropyrimidine dehydrogenase [Sinorhizobium fredii NGR234]
Length = 437
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 138/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM +D W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCVEDAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDVRKPARAAKAGGTDAVSLINTINSITSVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLTLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSDWMDAKGHR---------------------TLDDICGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +++ + +
Sbjct: 322 AVPNVTDWQYLNLNYVSKAKIDQ 344
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDICGRAVPNVTDWQYLNLNYVSKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGMR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ ++ N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYV---------NLREMKQVKMN 99
>gi|162454677|ref|YP_001617044.1| dihydropyrimidine dehydrogenase [Sorangium cellulosum So ce56]
gi|161165259|emb|CAN96564.1| Dihydropyrimidine dehydrogenase [Sorangium cellulosum So ce56]
Length = 462
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M KD+W E+ +K E GAD LELN CPHGM ERGMG A G +P +++ I+
Sbjct: 101 LIASLM-VETKDEWREIIRKAEDTGADGLELNFGCPHGMCERGMGSAVGNEPAVLQEIAR 159
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W P VKLTPN+ +I + +A A GVS INTV LM + + P P VG
Sbjct: 160 WAVEFATTPVIVKLTPNVGDILEPGEAVLRSGAHGVSLINTVKSLMGVDLERMVPLPRVG 219
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
+T GG G A +P+ L +S +A+ PI GIGGI ++ A +FI GA +V
Sbjct: 220 GA--STNGGYCGPAVKPIALHLLSQLARHPGVGRLPISGIGGISNSRDAAEFIALGATSV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV + + +V++ I GL L
Sbjct: 278 QVCTAVMHYGYRIVEEMIEGLSDWL 302
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 13/90 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S++ G+K PNPF LASAPPT VRRAF+ GWG AV KT + + NVS R
Sbjct: 1 MADLSIDFAGIKSPNPFWLASAPPTNTGDQVRRAFDAGWGGAVWKTLG---NPIVNVSSR 57
Query: 405 ---IVKGTTSRHLYGPEQGSFLNIELISEK 431
I G T L G N+ELI+++
Sbjct: 58 FGGIDYGNT--RLMG-----LNNVELITDR 80
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF 543
SV ++ G+A+ +V + ELD +VVA I+ D CI C CY+AC D +Q I
Sbjct: 309 SVNELRGRAIPQVQEWGELDLSYRVVADISADKCIGCQLCYVACMDGAHQCIHL 362
>gi|395761013|ref|ZP_10441682.1| dihydropyrimidine dehydrogenase subunit B [Janthinobacterium
lividum PAMC 25724]
Length = 426
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 136/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W ++ K E GAD +ELN CPHGM ERGMG A GQ PE V+ ++
Sbjct: 103 MIVSLMLPCEEHYWADILPKVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVQMVTA 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + ++P VKLTPNIT++ A+AA G AD VS INT++ + SL D P VG
Sbjct: 163 WCKKYSRLPVIVKLTPNITDVRMPARAAKAGGADAVSLINTINSITSLDLDRMVALPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI GA V
Sbjct: 223 GA--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPISGIGGIGNWRDAAEFIALGAGCV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ GL + K + + D GK
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWMDEKGYE---------------------RISDFSGK 319
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+ N ++K + N ++K+
Sbjct: 320 AVANTTDWKYLDMNYQVIAHIKQ 342
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S++ CG+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIDFCGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
LYG E F NIELI++++
Sbjct: 60 Y------SALYGKNREVVGFNNIELITDRS 83
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-----TFHP 545
+ D G+AV T++ LD QV+A I D CI CGKCY+AC D+ +Q+I
Sbjct: 313 ISDFSGKAVANTTDWKYLDMNYQVIAHIKQDDCIKCGKCYVACEDTSHQSIAQLIDAAGT 372
Query: 546 ETHQAHVTDECTGCTLC 562
T++ + + C GC LC
Sbjct: 373 RTYEV-IKEHCVGCNLC 388
>gi|418398726|ref|ZP_12972279.1| dihydropyrimidine dehydrogenase subunit B [Sinorhizobium meliloti
CCNWSX0020]
gi|359507170|gb|EHK79679.1| dihydropyrimidine dehydrogenase subunit B [Sinorhizobium meliloti
CCNWSX0020]
Length = 437
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 136/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + ++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSITGVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDAKGHR---------------------TLDDISGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L F NIELI+++ ++ N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GFNNIELITDRDLYV---------NLREMKQVKMN 99
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDISGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
>gi|15966201|ref|NP_386554.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti 1021]
gi|334317207|ref|YP_004549826.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
AK83]
gi|384530331|ref|YP_005714419.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
BL225C]
gi|384537030|ref|YP_005721115.1| Dihydropyrimidine dehydrogenase [Sinorhizobium meliloti SM11]
gi|407721506|ref|YP_006841168.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti Rm41]
gi|433614270|ref|YP_007191068.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Sinorhizobium meliloti GR4]
gi|15075471|emb|CAC47027.1| Dihydropyrimidine dehydrogenase [Sinorhizobium meliloti 1021]
gi|333812507|gb|AEG05176.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
BL225C]
gi|334096201|gb|AEG54212.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
AK83]
gi|336033922|gb|AEH79854.1| Dihydropyrimidine dehydrogenase [Sinorhizobium meliloti SM11]
gi|407319738|emb|CCM68342.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti Rm41]
gi|429552460|gb|AGA07469.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Sinorhizobium meliloti GR4]
Length = 437
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 136/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + ++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSITGVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDAKGHR---------------------TLDDISGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L F NIELI+++ ++ N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GFNNIELITDRDLYV---------NLREMKQVKMN 99
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDISGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
>gi|402702649|ref|ZP_10850628.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas fragi A22]
Length = 424
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M + W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCEEQAWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT++ A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDVRLSARAAHRGGADAVSLINTINSITSVDLERMVALPMVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G AV
Sbjct: 223 SQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFIALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +VD+ GL +
Sbjct: 281 QVCTAAMLHGFRIVDEMKDGLSRWM 305
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
S++D G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QAI+
Sbjct: 312 SLEDFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAISSVKLADG 371
Query: 547 THQAHVT-DECTGCTLC 562
T + V DEC GC LC
Sbjct: 372 TRRYEVIEDECVGCNLC 388
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RA+E GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H +GP E NIELI++++
Sbjct: 60 Y-----SAH-FGPNREVMGINNIELITDRS 83
>gi|224125864|ref|XP_002329736.1| predicted protein [Populus trichocarpa]
gi|222870644|gb|EEF07775.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 9/212 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 154 ILIASIMEEYNKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVC 213
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ + + +GV+AINT+ +M ++ P P V
Sbjct: 214 GWINAKATVPVWAKMTPNITDITQPARVSLKSGCEGVAAINTIMSVMGINLKTLRPEPCV 273
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN------FPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM + + + GIGG+++ A +FI
Sbjct: 274 --EGYSTPGGYSSKAVHPIALGKVMSIAKMMKSEFDLEQYSLSGIGGVETGSDAAEFILV 331
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLLYL 769
GA+ VQ+C+ V + +V L+ + +
Sbjct: 332 GANTVQVCTGVMMHGYGLVKKLCDELKDFMKM 363
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 49 DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 108
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN-----------FGEY 449
+ G+ + G E NIELIS++ F+ + EY
Sbjct: 109 RLRAGANGSAKGQIIGWE-----NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY 163
Query: 450 KKIR-ENLITELNLKKLNSDGVSLQ--NGLPKRQINTPV 485
K E LI + +++ ++ +G+P+R++ V
Sbjct: 164 NKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAV 202
>gi|330992501|ref|ZP_08316449.1| hypothetical protein SXCC_02408 [Gluconacetobacter sp. SXCC-1]
gi|329760700|gb|EGG77196.1| hypothetical protein SXCC_02408 [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VVVSLMVPCVEESWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + + ++P VKLTPNITNI A+AA G AD VS INT+ ++ + D P P V
Sbjct: 163 WCKQNTRMPVIVKLTPNITNILMPARAALRGGADAVSLINTIQSVIGVDLDLMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L+ + IA+ PI GIGGI S A +F+ GA +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGDIARDPELARLPISGIGGIGSWRDAAEFLAMGASTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMADGLSAWM 305
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
++ DV G+A++R + +L+ K +A I+ D CI CG C++AC D+ +QAI E
Sbjct: 312 TIDDVTGRAIERFVPWNQLNMKFNTIAKIDQDACIKCGLCHIACEDTSHQAIAKTRVDGE 371
Query: 547 THQAHVTDECTGCTLCLSI 565
H + EC GC LC +
Sbjct: 372 RHYEVIDAECVGCNLCAHV 390
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G++ PNPF LASAPPT +RRAFE GWG V KT + V NVS R
Sbjct: 1 MADLRTNFVGIRSPNPFWLASAPPTDKEYNIRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
S G NIELIS++
Sbjct: 60 Y----GSLDYNGTRMIGLNNIELISDR 82
>gi|255586410|ref|XP_002533851.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
gi|223526209|gb|EEF28534.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
Length = 429
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 119/199 (59%), Gaps = 9/199 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM Y+K W EL + E+ G DA+E+N SCPHGM ER MG A GQD ++ I
Sbjct: 158 ILIASIMEEYDKAAWEELIDRVEQTGIDAIEVNFSCPHGMPERKMGAAVGQDCGLLEEIC 217
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV + +P + K+TPNIT+IT+ A+AA +G+SAINT+ +M ++ P P V
Sbjct: 218 GWVNAKATVPVWAKMTPNITDITEPARAALRSGCEGISAINTIMSVMGINLKTLRPEPCV 277
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN------FPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V +IAKM + + + GIGG+++ A +FI
Sbjct: 278 --EGYSTPGGYSSKAVHPIALGKVMNIAKMMKSEFNIDQYSLSGIGGVETGSDAAEFILL 335
Query: 738 GAHAVQICSAVQNQDFTVV 756
GA+ VQ+C+ V + +V
Sbjct: 336 GANTVQVCTGVMMHGYGLV 354
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI- 405
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL + V NV+PR
Sbjct: 53 DLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAEKVINVTPRYA 112
Query: 406 -----VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPN-----------FGEY 449
V G+ + G E NIELIS++ F+ + EY
Sbjct: 113 RLRAGVNGSAKGQIIGWE-----NIELISDRPLETMLKEFKQLKEEYPERILIASIMEEY 167
Query: 450 KKIR-ENLITELNLKKLNSDGVSLQ--NGLPKRQINTPV 485
K E LI + +++ V+ +G+P+R++ V
Sbjct: 168 DKAAWEELIDRVEQTGIDAIEVNFSCPHGMPERKMGAAV 206
>gi|398830921|ref|ZP_10589102.1| dihydroorotate dehydrogenase family protein [Phyllobacterium sp.
YR531]
gi|398213501|gb|EJN00095.1| dihydroorotate dehydrogenase family protein [Phyllobacterium sp.
YR531]
Length = 436
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 133/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + + E+ G D +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEEAWKAILPRVEETGCDGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA G D VS INT++ ++S+ D P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDVRKPARAAKSGGTDAVSLINTINSIVSVDLDTFAPNPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETRGLPISGIGGITTWRDAAEFIALGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I+GL + + D G
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSDWMDSRGFS---------------------SIEDFRGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N IT+ + +
Sbjct: 322 AVPNVTDWQYLNLNYITKAQIDQ 344
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S++D G AV VT++ L+ A I+ D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 SIEDFRGMAVPNVTDWQYLNLNYITKAQIDQDLCIKCGRCHIACEDTSHQAITSMVDGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S G+K PNPF LASAPPT + V RAF GWG V KT + V NV+
Sbjct: 1 MADLSSNFLGIKSPNPFWLASAPPTDKAYNVERAFAAGWGGVVWKTLGEEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G ++GP++ NIELI+++
Sbjct: 59 ---GPRYGAIHGPDRRLLGLNNIELITDR 84
>gi|116784451|gb|ABK23347.1| unknown [Picea sitchensis]
Length = 368
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIAS+M Y++ W EL ++ E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 97 ILIASVMEEYDRAAWQELIERVEETGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVC 156
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
WV +P + K+TPN+T+I + A+ A ++G++AINT+ +M ++ D P P V
Sbjct: 157 GWVNEKATVPVWAKMTPNVTDIAEPARVALRSGSEGIAAINTIMSVMGINLDTLRPEPCV 216
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIA+M P + GIGG+++ A +FI
Sbjct: 217 --EGYSTPGGYSSKAVHPIALAKVMSIAQMMKSEFPDPALSLSGIGGVENGGHAAEFILL 274
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA+ VQ+C+ V + V + L+ +
Sbjct: 275 GANTVQVCTGVMMHGYGHVKQLCSELKDFM 304
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 357 FPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYG 416
PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR + H G
Sbjct: 1 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDSSKVINVTPRYARLRAGGH-NG 59
Query: 417 PEQGSFL---NIELISEK 431
+G + NIELIS++
Sbjct: 60 SAKGEVIGWENIELISDR 77
>gi|440227581|ref|YP_007334672.1| dihydroorotate dehydrogenase family protein [Rhizobium tropici CIAT
899]
gi|440039092|gb|AGB72126.1| dihydroorotate dehydrogenase family protein [Rhizobium tropici CIAT
899]
Length = 437
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDQETYGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ ITGL + +KG D +
Sbjct: 283 QVCTAAMTYGFKIVEEMITGLSDWM-------------------DEKGH--RTLDDVVAR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNVSDWQYLNLNYIAKAKIDQ 344
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K++++N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKQVKKN 99
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT-FHPETH 548
++ DV+ +AV V+++ L+ A I+ D CI CG+C++AC D+ +QAIT F
Sbjct: 314 TLDDVVARAVPNVSDWQYLNLNYIAKAKIDQDACIKCGRCHIACEDTSHQAITNFVDGVR 373
Query: 549 QAHVT-DECTGCTLCLSI 565
+ V +EC GC LC+++
Sbjct: 374 RFEVMEEECVGCNLCVNV 391
>gi|347759614|ref|YP_004867175.1| dihydropyrimidine dehydrogenase [Gluconacetobacter xylinus NBRC
3288]
gi|347578584|dbj|BAK82805.1| dihydropyrimidine dehydrogenase [Gluconacetobacter xylinus NBRC
3288]
Length = 424
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VVVSLMVPCVEESWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPNITN+ A+AA G AD VS INT+ ++ + D P P V
Sbjct: 163 WCKQNTRMPVIVKLTPNITNVLMPARAARRGGADAVSLINTIQSVIGVDLDTMAPMPTVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L+ + IA+ PI GIGGI S A +F+ GA +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGDIARDPEMAGLPISGIGGIGSWRDAAEFLAMGATTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMTDGLSAWM 305
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
++ DV G+AV+R + +L+ K +A I+ D CI CG C++AC D+ +QAI E
Sbjct: 312 TINDVTGRAVERFVPWNQLNMKFNTIARIDQDACIKCGLCHIACEDTSHQAIAKTKVEGE 371
Query: 547 THQAHVTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 372 RHYEVIDEECVGCNLCAHV 390
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G++ PNPF LASAPPT VRRAFE GWG V KT + V NVS R
Sbjct: 1 MADLRTNFVGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
S + G NIELIS++
Sbjct: 60 Y----GSLNYNGTRMIGLNNIELISDR 82
>gi|297830412|ref|XP_002883088.1| dihydroorotate dehydrogenase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328928|gb|EFH59347.1| dihydroorotate dehydrogenase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 426
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 120/209 (57%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 156 ILIASIMEEYNKTAWEELIDRVEQTGVDALEINFSCPHGMPERRMGAAVGQDCVLLDEVC 215
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT+ A+ + + +G+SAINT+ +M + P P V
Sbjct: 216 GWINAKATVPVWAKMTPNITDITEPARVSLKSGCEGISAINTIMSVMGVDMKTLRPEPCV 275
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-----PNFPILGIGGIDSADVALQFIQAG 738
+ +T GG S A RP+ L V +IAKM N + GIGG+++ A +FI G
Sbjct: 276 --EGYSTPGGYSYKAVRPIALAKVMNIAKMMKSEFSENHSLSGIGGVETGYDAAEFILLG 333
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
++ VQ+C+ V + V LQ +
Sbjct: 334 SNTVQVCTGVMMHGYGHVKTLCAELQDFM 362
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 51 DLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 110
Query: 407 K-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN---- 461
+ T S + + NIELIS++ F+ + + + +++ E N
Sbjct: 111 RLRTGSNGSAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASIMEEYNKTAW 170
Query: 462 ---LKKLNSDGV-------SLQNGLPKRQINTPV 485
+ ++ GV S +G+P+R++ V
Sbjct: 171 EELIDRVEQTGVDALEINFSCPHGMPERRMGAAV 204
>gi|349687117|ref|ZP_08898259.1| dihydropyrimidine dehydrogenase subunit B [Gluconacetobacter
oboediens 174Bp2]
Length = 424
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VVVSLMVPCVEESWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + + ++P VKLTPNITNI A+AA G AD VS INTV ++ + D P P V
Sbjct: 163 WCKQNTRMPVIVKLTPNITNILMPARAALRGGADAVSLINTVQSVIGVDLDLMAPMPVVD 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ T+GG G A +P+ L+ + IA+ PI GIGGI S A +F+ GA +
Sbjct: 223 GQG--THGGYCGPAVKPIALRMIGDIARDPELARLPISGIGGIGSWRDAAEFLAMGATTL 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D GL +
Sbjct: 281 QVCTAAMHYGFRIVEDMTDGLSAWM 305
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT---FHPE 546
++ DV G+AV+R + L+ K + +A I+ D CI CG C++AC D+ +QAI E
Sbjct: 312 TIADVTGRAVERFVPWNRLNMKFKTIAKIDQDACIKCGLCHIACEDTSHQAIARSKVDGE 371
Query: 547 THQAHVTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 372 RHYEVIDEECVGCNLCAHV 390
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G++ PNPF LASAPPT VRRAFE GWG V KT + V NVS R
Sbjct: 1 MADLRTNFVGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLG-EDPPVVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
S G NIELIS++
Sbjct: 60 Y----GSLDYNGTRMIGLNNIELISDR 82
>gi|397696041|ref|YP_006533924.1| dihydropyrimidine dehydrogenase [Pseudomonas putida DOT-T1E]
gi|397332771|gb|AFO49130.1| dihydropyrimidine dehydrogenase [Pseudomonas putida DOT-T1E]
Length = 424
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + T+ + + GQAV T++ LD + VA I+ + CI CG+C++
Sbjct: 297 MQDGLARWMDQHGHSTVEAFR---GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPETHQAH----VTDECTGCTLC 562
AC D+ +QAI + H + +EC GC LC
Sbjct: 354 ACEDTSHQAIASTLKADGTHAYSVIEEECVGCNLC 388
>gi|325273455|ref|ZP_08139703.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. TJI-51]
gi|324101411|gb|EGB99009.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. TJI-51]
Length = 424
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M + W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCEEASWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKQHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPATHGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMKDGLARWM 305
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIMFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFL-NIELISEKT 432
S H Q + NIELI++++
Sbjct: 60 Y-----SAHYGANRQVQGINNIELITDRS 83
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
GQAV T++ LD + VA I+ CI CG+C++AC D+ +QAI + H
Sbjct: 318 GQAVGHTTDWKYLDINYKSVAHIDQQACIGCGRCHIACEDTSHQAIASTLKADGTHAYSV 377
Query: 552 VTDECTGCTLC 562
+ +EC GC LC
Sbjct: 378 IEEECVGCNLC 388
>gi|386011373|ref|YP_005929650.1| Dihydropyrimidine dehydrogenase [Pseudomonas putida BIRD-1]
gi|313498079|gb|ADR59445.1| Dihydropyrimidine dehydrogenase [Pseudomonas putida BIRD-1]
Length = 424
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + TI + + GQAV T++ LD + VA I+ + CI CG+C++
Sbjct: 297 MQDGLARWMDQHGHATIEAFR---GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPETHQAH----VTDECTGCTLC 562
AC D+ +QAI E H + +EC GC LC
Sbjct: 354 ACEDTSHQAIASTLEADGTHAYSVIEEECVGCNLC 388
>gi|326526047|dbj|BAJ93200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 137/245 (55%), Gaps = 14/245 (5%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI SIM YNK W EL ++ E++G DALE+N SCPHGM ER MG A GQD ++ +S
Sbjct: 147 ILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVS 206
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ +P + K+TPNIT+IT ++ A + ++G++AINT+ +M + P P V
Sbjct: 207 GWINEKATVPVWSKMTPNITDITQPSRIALKSGSEGIAAINTIMSVMGIDLKTLRPEPCV 266
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFP----ILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V IA++ FP + IGG+++ + A +FI G
Sbjct: 267 --EGYSTPGGYSARAVHPIALAKVMQIARLIKEEFPEGRSLSAIGGVETGNDAAEFILLG 324
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPP-----TPVHQKGKP 792
A VQ+C+ V + +V T LQ + + + ++ + G S P T + Q+ K
Sbjct: 325 ADTVQVCTGVMMHGYGLVKKLCTELQDFMRMHDFSSIEDFRGASLPYFTTHTDLVQRQKE 384
Query: 793 AYQFR 797
A + R
Sbjct: 385 AIKQR 389
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 42 DLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAGKVINVTPRYA 101
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
+ G+T + G + NIELIS++ F+ + + + +++ E
Sbjct: 102 RLRADPNGSTKSPIIG-----WQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEY 156
Query: 461 N-------LKKLNSDGV-------SLQNGLPKRQINTPV 485
N ++++ GV S +G+P+R++ V
Sbjct: 157 NKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAV 195
>gi|397167364|ref|ZP_10490806.1| dihydroorotate dehydrogenase family domain protein [Enterobacter
radicincitans DSM 16656]
gi|396090722|gb|EJI88290.1| dihydroorotate dehydrogenase family domain protein [Enterobacter
radicincitans DSM 16656]
Length = 434
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ SIM ++ W + + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 VVVSIMVPCEEEAWKWILPQVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
W + +P VKLTPNIT+I A+AA G AD VS INT++ +M + D P G
Sbjct: 164 WCKQYCSLPVIVKLTPNITDIRYPARAAKAGGADAVSLINTINSVMGVDLDQMLMTPHTG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ I + P PI GIGGI + A +FI G V
Sbjct: 224 NQG--SHGGYCGPAVKPIALNMVAEIGRDAPMRGLPISGIGGISTWRDAAEFIALGCGTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV F +V D I+GL+ +
Sbjct: 282 QVCTAVMVHGFQIVRDMISGLENHM 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+ PNPF LASAPPT V RAF+ GWG V KT L +V PR
Sbjct: 1 MADLHSNFLGIHSPNPFWLASAPPTDKEYNVERAFQAGWGGVVWKTLGLDPHVVNVCGPR 60
Query: 405 --IVKGTTSRHLYGPEQGSFLNIELISEKT 432
++G R L NIELI++++
Sbjct: 61 YSTLRGADRRIL------GLNNIELITDRS 84
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI--TFHPET 547
+++D G A+ VT++ L+ A+I+ CI CG+C++ C D+ +QAI + E
Sbjct: 313 TLEDFRGMALGSVTDWRYLNLNHVEKAVIDQTSCIKCGRCHLVCEDTSHQAISTSLMGER 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H A ++C GC LC S+
Sbjct: 373 HFAVREEDCVGCNLCASV 390
>gi|354595573|ref|ZP_09013590.1| dihydroorotate dehydrogenase family protein [Brenneria sp. EniD312]
gi|353673508|gb|EHD19541.1| dihydroorotate dehydrogenase family protein [Brenneria sp. EniD312]
Length = 437
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 MIVSIMVPCEEEAWKSILPLVEQTGADGIELNFGCPHGMSERGMGAAVGQVPEYIAMVTR 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P VKLTPNI +I A+AA +G AD VS INT++ +M + + P G
Sbjct: 164 WCKQYSRLPTIVKLTPNIADIRQPARAALQGGADAVSLINTINSVMGVDLERMTIHPNTG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN--FPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ P P+ GIGGI + A +FI G V
Sbjct: 224 GKG--SHGGYCGPAVKPIALNMVAEIARDEPTRALPMSGIGGIATWRDAAEFIALGCGTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV F +V D ++GL +
Sbjct: 282 QVCTAVMVHGFQIVRDMVSGLSNFM 306
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF--HPET 547
+++D G+AV V+++ L+ A+I+ CI CG+C++AC D+ +QAIT E
Sbjct: 313 TLEDFRGRAVGSVSDWRYLNLNHIDKAVIDQSACIKCGRCHLACEDTSHQAITSLKEGER 372
Query: 548 HQAHVTDECTGCTLCLSI 565
H +EC GC LC+SI
Sbjct: 373 HYEVKEEECVGCNLCVSI 390
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS G+K PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADISSNFLGIKSPNPFWLASAPPTDKEYNVVRAFEAGWGGVVWKTLGQDPHVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEKT 432
T R + G NIELI++++
Sbjct: 61 YSTLRTADRRIIG-----LNNIELITDRS 84
>gi|26990740|ref|NP_746165.1| dihydropyrimidine dehydrogenase [Pseudomonas putida KT2440]
gi|24985736|gb|AAN69629.1|AE016596_7 dihydroorotate dehydrogenase family protein [Pseudomonas putida
KT2440]
Length = 424
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + T+ + + GQAV T++ LD + VA I+ + CI CG+C++
Sbjct: 297 MQDGLARWMDQHGHATVEAFR---GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPETHQAH----VTDECTGCTLC 562
AC D+ +QAI + H + +EC GC LC
Sbjct: 354 ACEDTSHQAIASTLKADGTHAYSVIEEECVGCNLC 388
>gi|395448345|ref|YP_006388598.1| dihydropyrimidine dehydrogenase [Pseudomonas putida ND6]
gi|388562342|gb|AFK71483.1| dihydropyrimidine dehydrogenase [Pseudomonas putida ND6]
Length = 424
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + TI + + GQAV T++ LD + VA I+ + CI CG+C++
Sbjct: 297 MQDGLARWMDQQGHATIEAFR---GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPETHQAH----VTDECTGCTLC 562
AC D+ +QAI + H + +EC GC LC
Sbjct: 354 ACEDTSHQAIASTLKADGTHAYSVIEEECVGCNLC 388
>gi|148547035|ref|YP_001267137.1| dihydropyrimidine dehydrogenase [Pseudomonas putida F1]
gi|148511093|gb|ABQ77953.1| dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil
dehydrogenase (NAD+) [Pseudomonas putida F1]
Length = 424
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + TI + + GQAV T++ LD + VA I+ + CI CG+C++
Sbjct: 297 MQDGLARWMDQHGHATIEAFR---GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPETHQAH----VTDECTGCTLC 562
AC D+ +QAI + H + +EC GC LC
Sbjct: 354 ACEDTSHQAIASTLKADGTHAYSVIEEECVGCNLC 388
>gi|421520299|ref|ZP_15966965.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida LS46]
gi|402755853|gb|EJX16321.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida LS46]
Length = 424
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMQDGLARWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YGP + NIELI++++
Sbjct: 60 Y-----SAH-YGPNRQVQGINNIELITDRS 83
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+Q+GL + TI + + GQAV T++ LD + VA I+ + CI CG+C++
Sbjct: 297 MQDGLARWMDQHGHPTIEAFR---GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPETHQAH----VTDECTGCTLC 562
AC D+ +QAI + H + +EC GC LC
Sbjct: 354 ACEDTSHQAIASTLKADGTHAYSVIEEECVGCNLC 388
>gi|255264310|ref|ZP_05343652.1| dihydroorotate dehydrogenase family protein [Thalassiobium sp.
R2A62]
gi|255106645|gb|EET49319.1| dihydroorotate dehydrogenase family protein [Thalassiobium sp.
R2A62]
Length = 434
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 134/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SIM ++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIVSIMVPCEEEAWKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYSKPVIVKLTPNITDVRKPAAAAKRGGADAVSLINTINSITSVNLDSMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + VS IA+ FPI GIGG+ + A +FI G V
Sbjct: 225 GKG--THGGYCGPAVKPIAMSMVSEIARNSETQGFPISGIGGVTTWRDAAEFITLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + KG + D G
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSDWM-------------------DSKGHTS--IDDFLGA 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNTTDWQYLNLNYVAKAKIDQ 344
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ D +G AV T++ L+ A I+ D CI+CG+CY AC D+ +QAI P+
Sbjct: 314 SIDDFLGAAVPNTTDWQYLNLNYVAKAKIDQDACISCGRCYAACEDTSHQAIAMSPDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 TVIDEECVACNLCVDV 389
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+ PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLTTNFLGISSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
G +YG ++ NIELI+++ + N E K+++ +
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRDLYT---------NLEEIKRVKAD 99
>gi|399519085|ref|ZP_10759893.1| dihydropyrimidine dehydrogenase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112909|emb|CCH36451.1| dihydropyrimidine dehydrogenase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 424
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKTILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRTSARAAHRGGADAVSLINTINSITSIDLERMVALPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPETRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S++D G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QAI P+
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIARIDQDACIGCGRCHIACEDTSHQAIASLPQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYEVIDAECVGCNLC 388
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKT 432
S H +G ++ NIELI++++
Sbjct: 60 Y-----SAH-FGADRSVLGINNIELITDRS 83
>gi|426330460|ref|XP_004026229.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Gorilla
gorilla gorilla]
Length = 276
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 97/135 (71%), Gaps = 3/135 (2%)
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q+CSA+QNQDFTV
Sbjct: 18 GTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAIQNQDFTV 77
Query: 756 VDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIR 814
++DY TGL+ LLYLKS +L+ WDGQSP T HQKGKP + + K +P+FG Y + R
Sbjct: 78 IEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDKKLPSFGPYLEQR 137
Query: 815 ENLITE--LNLKKLN 827
+ +I E + LK+ N
Sbjct: 138 KKIIAENKIRLKEQN 152
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y + R+ +I E N +L V+ KR P I ++KDVIG+A+Q +
Sbjct: 127 LPSFGPYLEQRKKIIAE-NKIRLKEQNVAFSPL--KRNCFIPKRPIPTIKDVIGKALQYL 183
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
+ EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCTLC
Sbjct: 184 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCTLC 243
Query: 563 LSI 565
LS+
Sbjct: 244 LSV 246
>gi|121606904|ref|YP_984233.1| dihydropyrimidine dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120595873|gb|ABM39312.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Polaromonas naphthalenivorans
CJ2]
Length = 435
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 118/209 (56%), Gaps = 13/209 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M N+ W + + E GAD LELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LVVSLMVPCNEAAWKSILARVEDTGADGLELNFGCPHGMSERGMGSAVGQVPEYIEMVTQ 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW----- 680
W + ++P VKLTPNIT+I A+AA G AD VS INT++ +M + +P+
Sbjct: 165 WCKHYSRLPVIVKLTPNITDIRIPARAARRGGADAVSLINTINSIMGV----DPYSLTML 220
Query: 681 PAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAG 738
P+ G K ++GG G A +P+ L V+ IA+ PI GIGG+ S AL +I G
Sbjct: 221 PSTGGKG--SHGGYCGPAVKPIALNMVAEIARDPQTAGLPISGIGGVGSWRDALDYIALG 278
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A VQ+C+A F +V + +GL +
Sbjct: 279 AGTVQVCTAAMVHGFKIVQEMKSGLSDYM 307
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S+ D G+A+ V N++EL+ A+I+ D CI+CG+C++AC D+ +QAI+ +
Sbjct: 314 SIDDFRGRALPTVANWSELNLNHVSKAVIDQDSCISCGRCHIACEDTSHQAISAMKDGKR 373
Query: 548 HQAHVTDECTGCTLC 562
H DEC GC LC
Sbjct: 374 HFEVKEDECVGCNLC 388
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ ++ G+ PNPF LASAPPT + V RAFE GWG V KT + + NV+ P
Sbjct: 1 MANLQTNFIGIHSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLAEAGPTLVNVNGP 60
Query: 404 RI-VKGTTSRHLYGPEQGSFLNIELISEK 431
R + R L G F NIELI+++
Sbjct: 61 RYGALLSPDRRLLG-----FNNIELITDR 84
>gi|167034636|ref|YP_001669867.1| dihydropyrimidine dehydrogenase [Pseudomonas putida GB-1]
gi|166861124|gb|ABY99531.1| dihydroorotate dehydrogenase family protein [Pseudomonas putida
GB-1]
Length = 424
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P VG
Sbjct: 163 WCKTYCALPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+ AV
Sbjct: 223 DQ--STHGGYCGSAVKPIALNMVAEIARDPDTRGLPICGIGGIGNWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 281 QVCTAAMLHGFRIVEDMKDGLARWM 305
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQ--GSFLNIELISEKT 432
S H YG + NIELI++++
Sbjct: 60 Y-----SAH-YGANRMVQGINNIELITDRS 83
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
GQAV T++ LD + VA I+ + CI CG+C++AC D+ +QAI + H
Sbjct: 318 GQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHIACEDTSHQAIASTLKADGTHAYNV 377
Query: 552 VTDECTGCTLC 562
+ +EC GC LC
Sbjct: 378 IEEECVGCNLC 388
>gi|398354737|ref|YP_006400201.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Sinorhizobium fredii USDA 257]
gi|390130063|gb|AFL53444.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Sinorhizobium fredii USDA 257]
Length = 437
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + +++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSITAVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSDWMDAKGHR---------------------TLDDICGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNVTDWQYLNLNYVAKAKIDQ 344
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDICGRAVPNVTDWQYLNLNYVAKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ ++ N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYV---------NLREMKQVKMN 99
>gi|378826930|ref|YP_005189662.1| putative dihydropyrimidine dehydrogenase [Sinorhizobium fredii
HH103]
gi|365179982|emb|CCE96837.1| putative dihydropyrimidine dehydrogenase [Sinorhizobium fredii
HH103]
Length = 437
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 137/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEENAWKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ + +++ D +P P++
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAKAGGTDAVSLINTINSITAVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSDWMDAKGHR---------------------TLDDICGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNVTDWQYLNLNYVAKAKIDQ 344
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D+ G+AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDICGRAVPNVTDWQYLNLNYVAKAKIDQDACIKCGRCHIACEDTSHQAITQFVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ ++ N E K+++ N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYV---------NLREMKQVKMN 99
>gi|443711859|gb|ELU05435.1| hypothetical protein CAPTEDRAFT_139921, partial [Capitella teleta]
Length = 358
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 131/266 (49%), Gaps = 32/266 (12%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L S+M ++ W + ++ E G D +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 37 LFVSLMVPCEEESWKTIVQQVEDTGCDGVELNFGCPHGMPERGMGSAVGQVPEYIEMVTR 96
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + +P VKLTPNITNI A+AA G AD VS INT++ + + D +P V
Sbjct: 97 WCKQHCHLPVVVKLTPNITNIVVAAEAAQTGGADAVSLINTINSITGIDLDQMIGYPTVN 156
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ T GG G A +P+ L V IA+ PI IGGI A +FI GA V
Sbjct: 157 DQ--FTSGGYCGEAVKPIALNMVGQIARSPDTAELPISAIGGISCWRDAAEFIALGAGTV 214
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V D I GL ++ S + DG FR G
Sbjct: 215 QVCTAAMLNGFKIVQDMIDGLSR--WMDSKDYQSLDG----------------FR---GA 253
Query: 803 AIPNFGEYKKIRENLITELNLKKLNS 828
AIPN ++K + +LN K + S
Sbjct: 254 AIPNLTDWKYL------DLNYKTIAS 273
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
G A+ +T++ LD + +A I+ + CI CG+CY AC D+ +QAI P +
Sbjct: 252 GAAIPNLTDWKYLDLNYKTIASIDQNSCIQCGRCYAACEDTAHQAIAMTPSQNATERRFD 311
Query: 552 -VTDECTGCTLC 562
+ + C GC LC
Sbjct: 312 VINEACVGCNLC 323
>gi|357499179|ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago truncatula]
gi|355494893|gb|AES76096.1| Dihydropyrimidine dehydrogenase [Medicago truncatula]
Length = 424
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 117/199 (58%), Gaps = 9/199 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA+E+N SCPHGM ER MG A GQD ++ +
Sbjct: 153 ILIASIMEEYNKAAWEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVC 212
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+I+ A+ A +GV+AINT+ +M ++ + P P V
Sbjct: 213 GWINAKATVPVWAKMTPNITDISQPARVALSSGCEGVAAINTIMSVMGINLNTLRPEPCV 272
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM N+ + IGG+++ A +FI
Sbjct: 273 --EGYSTPGGYSAKAVHPIALGKVMSIAKMMKSEFDSENYSLSAIGGVETGGDAAEFILL 330
Query: 738 GAHAVQICSAVQNQDFTVV 756
GA+ VQ+C+ V + +V
Sbjct: 331 GANTVQVCTGVMMHGYGLV 349
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 298 ANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS--HIDLVDISVEICGL 355
ANLS T +++ N +++ K + + P + F S + D+SV++ GL
Sbjct: 2 ANLSMTQLKTRNSASRFSFNFSKKVYPR-----PSRVDFKVFASEGQVSEPDLSVKVNGL 56
Query: 356 KFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLY 415
PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR + + +
Sbjct: 57 HMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANAN-- 114
Query: 416 GPEQGSFL---NIELISEKTAFIFFFLFQAIPN-----------FGEYKKIR-ENLITEL 460
G +G + NIELIS++ F+ + EY K E LI +
Sbjct: 115 GSAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRV 174
Query: 461 NLKKLNSDGVSLQ--NGLPKRQINTPV 485
+++ ++ +G+P+R++ V
Sbjct: 175 EQTGIDAIEINFSCPHGMPERKMGAAV 201
>gi|115373492|ref|ZP_01460789.1| dihydropyrimidine dehydrogenase (NADP+) [Stigmatella aurantiaca
DW4/3-1]
gi|310825270|ref|YP_003957628.1| dihydropyrimidine dehydrogenase [Stigmatella aurantiaca DW4/3-1]
gi|115369498|gb|EAU68436.1| dihydropyrimidine dehydrogenase (NADP+) [Stigmatella aurantiaca
DW4/3-1]
gi|309398342|gb|ADO75801.1| Dihydropyrimidine dehydrogenase [Stigmatella aurantiaca DW4/3-1]
Length = 462
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 130/236 (55%), Gaps = 16/236 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+AS+M K++W E+ +++E AGAD LELN CPHGM ERGMG A G +P+++ I+
Sbjct: 101 LVASLM-VETKEEWREIIQRSEDAGADLLELNFGCPHGMCERGMGSAVGAEPKVLEEIAR 159
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++P VKLTPN+ +I + +AA +S INTV +M + D P P VG
Sbjct: 160 WAVEFARVPVIVKLTPNVGDILEPGEAAVRAGVPALSLINTVKSIMGVDLDRMVPLPRVG 219
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+T GG G A +P+ L +S +A+ I GIGGI + A +FI GA +V
Sbjct: 220 DA--STNGGYCGPAVKPIALHLLSQLARHPQCGRLAISGIGGISNWRDAAEFIALGATSV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRD 798
Q+C+AV + F +V+D + GL L K G S + + PA FRD
Sbjct: 278 QVCTAVMHHGFRIVEDMLEGLSDFLDEK--------GMSSVAELRGRAVPA--FRD 323
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E CG++ PNPF LASAPPT V RAF+ GWG AV KT + + NV+ R
Sbjct: 1 MADLSIEFCGIRSPNPFWLASAPPTNTGDQVMRAFDAGWGGAVWKTLG---NPIVNVTSR 57
Query: 405 ---IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFF 437
I G T L G NIELI+++ + F
Sbjct: 58 FGGIDYGNT--RLMG-----LNNIELITDRPLEVNF 86
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 31/104 (29%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV ++ G+AV ++ ELD ++VA IN D CI C CY+AC D +Q I T +
Sbjct: 309 SVAELRGRAVPAFRDWGELDLSYKLVADINPDTCIGCQLCYVACMDGSHQCIHLPGRTEE 368
Query: 550 A-----------HV--------------------TDECTGCTLC 562
HV +EC GC LC
Sbjct: 369 QSRQAGHTHLPKHVPERAVTAAAATPGARVPFVDEEECVGCNLC 412
>gi|260221587|emb|CBA30301.1| Uncharacterized protein yeiA [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 435
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 120/209 (57%), Gaps = 13/209 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W + + E GADA+ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 MIVSLMVPCQEESWKAILPRVEDTGADAIELNFGCPHGMSERGMGAAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW----- 680
W + K+P VKLTPNIT+I A+AA G AD VS INT++ +M + +P+
Sbjct: 165 WCKHYSKLPVIVKLTPNITDIRKPAQAAKRGGADAVSLINTINSIMGV----DPYTLTMS 220
Query: 681 PAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAG 738
P+ G K ++GG G A +P+ L V+ IA+ PI GIGGI + AL FI G
Sbjct: 221 PSTGGKG--SHGGYCGPAVKPIALNMVAEIARDPETAGLPISGIGGIGTWRDALDFIALG 278
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
+ VQ+C+A F +V + +GL +
Sbjct: 279 SGTVQVCTAAMVYGFKIVQEMESGLSNYM 307
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
SV +++G+AV V+++ L+ A+IN D CI CG+C++AC D+ +QAITF +
Sbjct: 314 SVGEIVGKAVPTVSDWRYLNLNHVSKAVINQDNCIQCGRCHIACEDTSHQAITFEKDGKR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H DEC GC LC+++
Sbjct: 374 HFEVKEDECVGCNLCVTV 391
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ ++ G+K PNPF LASAPPT + V RAFE GWG V KT V NV+ P
Sbjct: 1 MANLETTFAGVKSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGEAGPPVVNVNGP 60
Query: 404 RI-VKGTTSRHLYGPEQGSFLNIELISEK 431
R + R L G F NIELI+++
Sbjct: 61 RYGALLSADRRLNG-----FNNIELITDR 84
>gi|13471617|ref|NP_103183.1| dihydropyrimidine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14022359|dbj|BAB48969.1| probable oxidoreductase [Mesorhizobium loti MAFF303099]
Length = 437
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 132/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEASWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ G D VS INT++ + + D P P +
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEIARDPETRGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I GL+ + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMIAGLENWMDEKGHR---------------------SLDDIIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N + + ++ +
Sbjct: 322 ATPNVTDWQYLNLNYVAKAHIDQ 344
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S+ D+IG+A VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDIIGRATPNVTDWQYLNLNYVAKAHIDQDACIKCGRCHIACEDTSHQAITSMVDGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+++
Sbjct: 374 HFEVIEAECVGCNLCVNV 391
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|445495121|ref|ZP_21462165.1| NAD-dependent dihydropyrimidine dehydrogenase YeiA
[Janthinobacterium sp. HH01]
gi|444791282|gb|ELX12829.1| NAD-dependent dihydropyrimidine dehydrogenase YeiA
[Janthinobacterium sp. HH01]
Length = 431
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 140/264 (53%), Gaps = 30/264 (11%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I S+M + W ++ E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 102 VIIVSLMLPCEEKLWADILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVT 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
W ++ K+P VKLTPNIT++ A+AA G AD VS INT++ + L D +P V
Sbjct: 162 RWCKTHSKLPVIVKLTPNITDVRAPARAAKAGGADAVSLINTINSITHLDLDQMVAFPIV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
G +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G+
Sbjct: 222 GGA--STHGGYCGSAVKPIALNMVAEIARDPQTKGLPISGIGGIGNWRDAAEFMALGSGC 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKG-KPAYQFRDKE 800
VQ+C+A F +V++ GL + +KG K +F
Sbjct: 280 VQVCTAAMLHGFRIVEEMKDGLSRWM-------------------DEKGYKSISEFV--- 317
Query: 801 GKAIPNFGEYKKIREN--LITELN 822
GKA+PN ++K + N +I ++N
Sbjct: 318 GKAVPNTTDWKYLNMNYQVIAQIN 341
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 85/189 (44%), Gaps = 55/189 (29%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E CG+K NPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIEFCGIKSINPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----LI 457
S H YG E F NIELI++++ I N E +++++ +I
Sbjct: 60 Y-----SAH-YGKNREVLGFNNIELITDRSLEI---------NLTEITQVKKDWPDRVII 104
Query: 458 TELNL--------------KKLNSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAV 499
L L + +DG+ L +G+P+R +G AV
Sbjct: 105 VSLMLPCEEKLWADILPLVEATGADGIELNFGCPHGMPERG--------------MGAAV 150
Query: 500 QRVTNYTEL 508
+V Y E+
Sbjct: 151 GQVPEYVEM 159
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ + +G+AV T++ L+ QV+A IN D CI CG+CY+AC D+ +Q+I +
Sbjct: 312 SISEFVGKAVPNTTDWKYLNMNYQVIAQINQDDCIKCGRCYVACEDTSHQSIAQLIDAAS 371
Query: 550 AHVT-----DECTGCTLC 562
T +EC GC LC
Sbjct: 372 GTRTYEVIKEECVGCNLC 389
>gi|217072368|gb|ACJ84544.1| unknown [Medicago truncatula]
Length = 424
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 9/199 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA+E+N SCPHGM ER MG A GQD ++ +
Sbjct: 153 ILIASIMEEYNKAAWEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVC 212
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+I+ A+ A +G++AINT+ +M ++ + P P V
Sbjct: 213 GWINAKATVPVWAKMTPNITDISQPARVALSSGCEGIAAINTIMSVMGINLNTLRPEPCV 272
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM N+ + IGG+++ A +FI
Sbjct: 273 --EGYSTPGGYSAKAVHPIALGKVMSIAKMMKSEFDSENYSLSAIGGVETGGDAAEFILL 330
Query: 738 GAHAVQICSAVQNQDFTVV 756
GA+ VQ+C+ V + +V
Sbjct: 331 GANTVQVCTGVMMHGYGLV 349
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 298 ANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMS--HIDLVDISVEICGL 355
ANLS T +++ N +++ K + + P + F S + D+SV++ GL
Sbjct: 2 ANLSMTQLKTRNSASRFSFNFSKKVYPR-----PSRVDFKVFASEGQVSEPDLSVKVNGL 56
Query: 356 KFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLY 415
PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR + + +
Sbjct: 57 HMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANAN-- 114
Query: 416 GPEQGSFL---NIELISEKTAFIFFFLFQAIPN-----------FGEYKKIR-ENLITEL 460
G +G + NIELIS++ F+ + EY K E LI +
Sbjct: 115 GSAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRV 174
Query: 461 NLKKLNSDGVSLQ--NGLPKRQINTPV 485
+++ ++ +G+P+R++ V
Sbjct: 175 EQTGIDAIEINFSCPHGMPERKMGAAV 201
>gi|256422463|ref|YP_003123116.1| dihydropyrimidine dehydrogenase [Chitinophaga pinensis DSM 2588]
gi|256037371|gb|ACU60915.1| dihydroorotate dehydrogenase family protein [Chitinophaga pinensis
DSM 2588]
Length = 422
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 124/223 (55%), Gaps = 6/223 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N++ W EL KK E GA LELN CPHGM ERGMG A GQDPE+ +
Sbjct: 101 MIVSLMADNNRESWHELIKKVEDTGAHGLELNFGCPHGMTERGMGAAVGQDPEIAGRVVA 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV IP KLTPN+ ++ +A+ +S INT+ + ++ D P P VG
Sbjct: 161 WVMEVASIPVITKLTPNVHSVVPTGRASVLAGCHALSLINTIQSVTGVNLDTFVPNPNVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ +T+GG G A +P+ LK +++I++ + PI GIGGI + A +F+ GA V
Sbjct: 221 GQ--STFGGYCGPAVKPIALKMLTTISQDPVTSRVPISGIGGISTWKDAAEFMLLGATTV 278
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPT 784
Q+C+A F +++D GL + K + + + G+S PT
Sbjct: 279 QVCTAAMRYGFRIIEDLCDGLNNWMDEKGFRTIDDFIGRSVPT 321
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---HPE 546
++ D IG++V +T++ ELD +VA IN + CI+CG CY++C D +QAI +P
Sbjct: 310 TIDDFIGRSVPTLTSWEELDINYHIVANINQEKCIHCGLCYISCEDGSHQAINLAYGNPY 369
Query: 547 THQAHVTDECTGCTLC 562
+ +EC GC LC
Sbjct: 370 NTYSIKEEECVGCNLC 385
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS G++ PNP+ LASAPPT V RAFE GWG V KT Q V NVS R
Sbjct: 1 MADISANFLGIRSPNPYWLASAPPTDKKINVLRAFEAGWGGVVWKTLGSQ---VKNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+S G F NIELIS++
Sbjct: 58 Y----SSVDYNGSRVMGFNNIELISDR 80
>gi|346992377|ref|ZP_08860449.1| dihydropyrimidine dehydrogenase subunit B [Ruegeria sp. TW15]
Length = 434
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 28/264 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + + + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASIMVPCEEAAWKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYDRPVIVKLTPNITDIRKPAAAAKNGGADAVSLINTINSITSVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ PI GIGG+ + A +FI G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALSMVSEIARAEATRGLPISGIGGVTTWRDAAEFISLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKE-G 801
Q+C+A F ++D+ GL + +KG Y D+ G
Sbjct: 283 QVCTAAMTYGFKIIDELTAGLSEWM-------------------DEKG---YTSIDQVIG 320
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
+A+PN +++ + N I + + +
Sbjct: 321 RAVPNVTDWQYLNLNYIAKAKIDQ 344
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ VIG+AV VT++ L+ A I+ D CI CG+CY AC D+ +QAI+ +
Sbjct: 314 SIDQVIGRAVPNVTDWQYLNLNYIAKAKIDQDQCIKCGRCYAACEDTSHQAISMSADRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 EVIDEECVACNLCVDV 389
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+ PNP+ LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLKSNFLGISSPNPYWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDR 84
>gi|388513197|gb|AFK44660.1| unknown [Medicago truncatula]
Length = 367
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 9/199 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA+E+N SCPHGM ER MG A GQD ++ +
Sbjct: 96 ILIASIMEEYNKAAWEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVC 155
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+I+ A+ A +G++AINT+ +M ++ + P P V
Sbjct: 156 GWINAKATVPVWAKMTPNITDISQPARVALSSGCEGIAAINTIMSVMGINLNTLRPEPCV 215
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V SIAKM N+ + IGG+++ A +FI
Sbjct: 216 --EGYSTPGGYSAKAVHPIALGKVMSIAKMMKSEFDSENYSLSAIGGVETGGDAAEFILL 273
Query: 738 GAHAVQICSAVQNQDFTVV 756
GA+ VQ+C+ V + +V
Sbjct: 274 GANTVQVCTGVMMHGYGLV 292
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 357 FPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYG 416
PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR + + + G
Sbjct: 1 MPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANAN--G 58
Query: 417 PEQGSFL---NIELISEKTAFIFFFLFQAIPN-----------FGEYKKIR-ENLITELN 461
+G + NIELIS++ F+ + EY K E LI +
Sbjct: 59 SAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 118
Query: 462 LKKLNSDGVSLQ--NGLPKRQINTPV 485
+++ ++ +G+P+R++ V
Sbjct: 119 QTGIDAIEINFSCPHGMPERKMGAAV 144
>gi|23501189|ref|NP_697316.1| dihydropyrimidine dehydrogenase [Brucella suis 1330]
gi|161618261|ref|YP_001592148.1| dihydropyrimidine dehydrogenase [Brucella canis ATCC 23365]
gi|260567096|ref|ZP_05837566.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261754289|ref|ZP_05997998.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 3 str. 686]
gi|376274951|ref|YP_005115390.1| dihydropyrimidine dehydrogenase [Brucella canis HSK A52141]
gi|376279978|ref|YP_005153984.1| dihydropyrimidine dehydrogenase [Brucella suis VBI22]
gi|384223972|ref|YP_005615136.1| dihydropyrimidine dehydrogenase [Brucella suis 1330]
gi|23347067|gb|AAN29231.1| dihydroorotate dehydrogenase family protein [Brucella suis 1330]
gi|161335072|gb|ABX61377.1| dihydroorotate dehydrogenase family protein [Brucella canis ATCC
23365]
gi|260156614|gb|EEW91694.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261744042|gb|EEY31968.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 3 str. 686]
gi|343382152|gb|AEM17644.1| dihydropyrimidine dehydrogenase [Brucella suis 1330]
gi|358257577|gb|AEU05312.1| dihydropyrimidine dehydrogenase [Brucella suis VBI22]
gi|363403518|gb|AEW13813.1| dihydropyrimidine dehydrogenase [Brucella canis HSK A52141]
Length = 436
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNDP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|153007710|ref|YP_001368925.1| dihydropyrimidine dehydrogenase [Ochrobactrum anthropi ATCC 49188]
gi|404317240|ref|ZP_10965173.1| dihydropyrimidine dehydrogenase subunit B [Ochrobactrum anthropi
CTS-325]
gi|151559598|gb|ABS13096.1| dihydroorotate dehydrogenase family protein [Ochrobactrum anthropi
ATCC 49188]
Length = 436
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+ A E D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARGAKENGTDAVSLINTINSIVSVDLDSMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV++ I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVEEMIDGLSDWMDSKGYQ 313
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV V+++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFRGMAVGHVSDWQYLNLNYVTKARIDQDSCIKCGRCHIACEDTSHQAITSLVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
>gi|163842566|ref|YP_001626970.1| dihydropyrimidine dehydrogenase [Brucella suis ATCC 23445]
gi|163673289|gb|ABY37400.1| dihydroorotate dehydrogenase family protein [Brucella suis ATCC
23445]
Length = 436
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|62289276|ref|YP_221069.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 1 str. 9-941]
gi|82699207|ref|YP_413781.1| dihydropyrimidine dehydrogenase [Brucella melitensis biovar Abortus
2308]
gi|189023530|ref|YP_001934298.1| dihydropyrimidine dehydrogenase [Brucella abortus S19]
gi|237814768|ref|ZP_04593766.1| dihydroorotate dehydrogenase family protein [Brucella abortus str.
2308 A]
gi|260545967|ref|ZP_05821708.1| dihydropyrimidine dehydrogenase [Brucella abortus NCTC 8038]
gi|260757288|ref|ZP_05869636.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|260761110|ref|ZP_05873453.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|260883093|ref|ZP_05894707.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|261324422|ref|ZP_05963619.1| dihydropyrimidine dehydrogenase [Brucella neotomae 5K33]
gi|297247693|ref|ZP_06931411.1| dihydropyrimidine dehydrogenase (NADP+) [Brucella abortus bv. 5
str. B3196]
gi|376273965|ref|YP_005152543.1| dihydropyrimidine dehydrogenase [Brucella abortus A13334]
gi|423167547|ref|ZP_17154250.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI435a]
gi|423170077|ref|ZP_17156752.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI474]
gi|423173843|ref|ZP_17160514.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI486]
gi|423176872|ref|ZP_17163518.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI488]
gi|423179510|ref|ZP_17166151.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI010]
gi|423182640|ref|ZP_17169277.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI016]
gi|423186417|ref|ZP_17173031.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI021]
gi|423191145|ref|ZP_17177753.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI259]
gi|62195408|gb|AAX73708.1| dihydroorotate dehydrogenase family protein [Brucella abortus bv. 1
str. 9-941]
gi|82615308|emb|CAJ10269.1| Legume lectin, beta domain:Dihydroorotate dehydrogenase:4Fe-4S
ferredoxin, iron-sulfur binding domain:FMN/related
compound-bi [Brucella melitensis biovar Abortus 2308]
gi|189019102|gb|ACD71824.1| dihydropyrimidine dehydrogenase [Brucella abortus S19]
gi|237789605|gb|EEP63815.1| dihydroorotate dehydrogenase family protein [Brucella abortus str.
2308 A]
gi|260097374|gb|EEW81249.1| dihydropyrimidine dehydrogenase [Brucella abortus NCTC 8038]
gi|260667606|gb|EEX54546.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|260671542|gb|EEX58363.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|260872621|gb|EEX79690.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|261300402|gb|EEY03899.1| dihydropyrimidine dehydrogenase [Brucella neotomae 5K33]
gi|297174862|gb|EFH34209.1| dihydropyrimidine dehydrogenase (NADP+) [Brucella abortus bv. 5
str. B3196]
gi|363401571|gb|AEW18541.1| dihydropyrimidine dehydrogenase (NADP+) [Brucella abortus A13334]
gi|374540981|gb|EHR12480.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI435a]
gi|374541589|gb|EHR13084.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI486]
gi|374542313|gb|EHR13802.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI474]
gi|374551029|gb|EHR22464.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI010]
gi|374551486|gb|EHR22920.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI016]
gi|374552622|gb|EHR24045.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI488]
gi|374553835|gb|EHR25249.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI259]
gi|374558096|gb|EHR29490.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI021]
Length = 436
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|56696653|ref|YP_167014.1| dihydropyrimidine dehydrogenase [Ruegeria pomeroyi DSS-3]
gi|56678390|gb|AAV95056.1| dihydroorotate dehydrogenase family protein [Ruegeria pomeroyi
DSS-3]
Length = 434
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + +W + + + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 VIVSIMVPCEEAEWKAILPRVAETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W ++ P VKLTPNIT+I A+AA G AD VS INT+S + S++ D +P P++
Sbjct: 165 WCKTYYDKPVIVKLTPNITDIRYPARAARNGGADAVSLINTISSITSVNLDNFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ I++ PI GIGG+ + A +F+ G V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEISRDPATQGLPISGIGGVTTWRDAAEFMSLGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV++ TGL + +KG + D G+
Sbjct: 283 QVCTAAMTYGFRVVEEMKTGLSQWM-------------------DEKGYTS--VNDFIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N + + + +
Sbjct: 322 AVPNVTDWQYLNLNYVAKAKIDQ 344
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV D IG+AV VT++ L+ A I+ D CI CG+CY AC D+ +QAI+ +
Sbjct: 314 SVNDFIGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCGRCYAACEDTSHQAISMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ DEC C LC+ +
Sbjct: 374 EVMDDECVACNLCVDV 389
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G++ PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLKTNFLGIESPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDR 84
>gi|306844922|ref|ZP_07477504.1| dihydroorotate dehydrogenase family protein [Brucella inopinata
BO1]
gi|306274751|gb|EFM56535.1| dihydroorotate dehydrogenase family protein [Brucella inopinata
BO1]
Length = 436
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|260754066|ref|ZP_05866414.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 6 str. 870]
gi|260674174|gb|EEX60995.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 6 str. 870]
Length = 436
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADQRLL------GLNNIELITDR 84
>gi|256368743|ref|YP_003106249.1| dihydropyrimidine dehydrogenase [Brucella microti CCM 4915]
gi|255998901|gb|ACU47300.1| dihydropyrimidine dehydrogenase [Brucella microti CCM 4915]
Length = 436
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGLPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|84503342|ref|ZP_01001411.1| dihydropyrimidine dehydrogenase [Oceanicola batsensis HTCC2597]
gi|84388252|gb|EAQ01203.1| dihydropyrimidine dehydrogenase [Oceanicola batsensis HTCC2597]
Length = 434
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 28/264 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM +++ W + + + GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 LIASIMVPCDEESWKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + P VKLTPNIT+I A+AA G AD VS INT++ + + D P P +
Sbjct: 165 WCKKYYDRPVIVKLTPNITDIRKPAEAARAGGADAVSLINTINSITHVDLDLMAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ PI GIGG+ + A +F+ G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALSMVSEIARNQATHGLPISGIGGVTTWRDAAEFMVLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKE-G 801
Q+C+A F VV + I+GL + +KG Y D+ G
Sbjct: 283 QVCTAAMTYGFKVVQEMISGLSQWM-------------------DEKG---YTSTDQFIG 320
Query: 802 KAIPNFGEYKKIRENLITELNLKK 825
+A+PN +++ + N +T+ + +
Sbjct: 321 QAVPNVTDWQYLNLNYVTKARIDQ 344
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S IGQAV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI +
Sbjct: 314 STDQFIGQAVPNVTDWQYLNLNYVTKARIDQDLCIKCGRCYAACEDTSHQAIGMNEGRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+++
Sbjct: 374 EVIDEECVACNLCVNV 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G++ PNPF LASAPPT VRRAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLTTDFLGIRSPNPFWLASAPPTDKEYNVRRAFDAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|126731572|ref|ZP_01747378.1| dihydropyrimidine dehydrogenase [Sagittula stellata E-37]
gi|126708108|gb|EBA07168.1| dihydropyrimidine dehydrogenase [Sagittula stellata E-37]
Length = 434
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 133/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + + + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 LIASIMVPCEEAAWKAILPRVAETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + S+ D P P +
Sbjct: 165 WCKMYYDKPVIVKLTPNITDIRKPAAAARNGGADAVSLINTINSITSVDLDSFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ PI GIGG+ + A +F+ G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALSMVSEIARDPQTHGLPISGIGGVTTWRDAAEFMVLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV++ GL + KG+ + D GK
Sbjct: 283 QVCTAAMTYGFKVVEEMKRGLSQWM-----DEKGYTSTA----------------DFVGK 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N IT+ + +
Sbjct: 322 AVPNVTDWQYLNLNYITKARIDQ 344
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D +G+AV VT++ L+ A I+ D CI CG+C+ AC D+ +QAI H E
Sbjct: 314 STADFVGKAVPNVTDWQYLNLNYITKARIDQDACIKCGRCFAACEDTSHQAIWMH-EDRT 372
Query: 550 AHVTD-ECTGCTLCLSI 565
V D EC C LCL +
Sbjct: 373 FEVNDAECVACNLCLDV 389
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+ PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTDFVGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|405377660|ref|ZP_11031599.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF142]
gi|397325787|gb|EJJ30113.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF142]
Length = 437
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 115/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEQAWKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT++ ++S+ D P P VG
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETQGLPISGIGGITTWRDAAEFLVLGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V + ITGL +
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWM 307
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT-FHPETH 548
++ D+ G+AVQ VT++ L+ A I+ D CI CG+CY+AC D+ +QAIT F
Sbjct: 314 TLDDITGRAVQNVTDWQYLNLNYIAKAKIDQDACIKCGRCYIACEDTSHQAITNFVDGVR 373
Query: 549 QAHVTD-ECTGCTLCLSI 565
V D EC GC LC+S+
Sbjct: 374 HFEVMDEECVGCNLCVSV 391
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ + G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLRNDFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|407776314|ref|ZP_11123587.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
pacificus pht-3B]
gi|407301605|gb|EKF20724.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
pacificus pht-3B]
Length = 436
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 131/263 (49%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M + W + E+ GAD +ELN CPHGM ERGMG A GQ P+ V +
Sbjct: 105 LVVSLMVPCEEQAWKAILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPDYVEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P KLTPNIT+I A+AA+ +D VS INT++ + ++ D P P +
Sbjct: 165 WCKQTTRMPVITKLTPNITDIRQPARAAHRAGSDAVSLINTINSITGVNLDTFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ PI GIGGI + A +F+ GA +
Sbjct: 225 GKG--SHGGFCGPAVKPIALHMVSEIARDPETAGLPISGIGGITTWRDAAEFLALGAGNL 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F VV + I GLQ + K D G+
Sbjct: 283 QVCTAAMTYGFKVVQEMIEGLQNWMDAKGHA---------------------SLDDVIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN E++ + N + + + +
Sbjct: 322 AAPNLREWQHLNLNYVAKARIDQ 344
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ DVIG+A + + L+ A I+ DMCI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDVIGRAAPNLREWQHLNLNYVAKARIDQDMCIKCGRCHIACEDTSHQAITAMVDGKR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVMEEECVGCNLCVNV 391
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RA++ GWG V KT V NV+ P
Sbjct: 1 MADIRSVFAGIKSPNPFWLASAPPTDKAYNVERAYKAGWGGVVWKTLGEDGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L NIELI+++ + N E K++++N L
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLHL---------NLREIKQVKKNWPDRAL 105
Query: 457 ITELN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+ L +++ +DGV L G P +S + +G AV +V
Sbjct: 106 VVSLMVPCEEQAWKAILPLVEETGADGVELNFGCPHG---------MSERG-MGSAVGQV 155
Query: 503 TNYTEL 508
+Y E+
Sbjct: 156 PDYVEM 161
>gi|433774633|ref|YP_007305100.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
australicum WSM2073]
gi|433666648|gb|AGB45724.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
australicum WSM2073]
Length = 437
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCVEESWKSILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI +I A+AA+ G D VS INT++ + + D P P +
Sbjct: 165 WCKQYTRMPVVTKLTPNIADIRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEIARDPETRGLPISGIGGITTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I GL+ + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMIAGLENWMDEKGHR---------------------SLDDIIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N + + ++ +
Sbjct: 322 ATPNVTDWQYLNLNYVAKAHIDQ 344
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D+IG+A VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDIIGRATPNVTDWQYLNLNYVAKAHIDQDACIKCGRCHIACEDTSHQAITSMVNGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+++
Sbjct: 374 HFEVIEAECVGCNLCVNV 391
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|242062600|ref|XP_002452589.1| hypothetical protein SORBIDRAFT_04g028610 [Sorghum bicolor]
gi|241932420|gb|EES05565.1| hypothetical protein SORBIDRAFT_04g028610 [Sorghum bicolor]
Length = 420
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI SIM YNK W EL ++ E++G DALE+N SCPHGM ER MG A GQD +++ +
Sbjct: 150 ILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCDLLEEVC 209
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ +P + K+TPNIT+IT A+ + + +GVSAINT+ +M ++ P P V
Sbjct: 210 GWINEKATVPVWAKMTPNITDITQPARISLKSGCEGVSAINTIMSVMGINLKTLRPEPCV 269
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-----FPILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V IA+M + IGG+++ + A +FI G
Sbjct: 270 --EGYSTPGGYSARAVHPIALAKVMQIARMMKEEFADGQSLSAIGGVETGNDAAEFILLG 327
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A VQ+C+ V + +V LQ +
Sbjct: 328 ADTVQVCTGVMMHGYPLVKKLCAELQDFM 356
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL+ PNPF + S PP T ++++RAF+ GWG + KT SL + V NV+PR
Sbjct: 45 DLSVRVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAEKVINVTPRYA 104
Query: 407 KGTTSRHLYGPEQGSFL---NIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN-- 461
K + G G + NIELIS++ F+ + + + +++ E N
Sbjct: 105 KLRADPN--GAAMGRIIGWQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEYNKA 162
Query: 462 -----LKKLNSDGV-------SLQNGLPKRQINTPV 485
++++ GV S +G+P+R++ V
Sbjct: 163 AWHELIERVEESGVDALEINFSCPHGMPERKMGAAV 198
>gi|350536037|ref|NP_001234738.1| PYD1A protein [Solanum lycopersicum]
gi|24850453|gb|AAN64920.1| putative dehydrogenase [Solanum lycopersicum]
Length = 429
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 9/210 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIM YNK W EL + E+ G DA E+N SCPHGM ER MG A GQD +++ +
Sbjct: 158 ILIASIMEEYNKAAWEELIYRCEETGIDAFEINFSCPHGMPERRMGAAVGQDCDLLEEVC 217
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT A+ A +GVSAINT+ +M ++ D P P V
Sbjct: 218 GWINAVATVPVWAKMTPNITDITKPARVALNQGCEGVSAINTIMSVMGINLDTLRPEPCV 277
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQA 737
+ +T GG S A P+ L V +IA+M ++ + IGG+++ A +FI
Sbjct: 278 --EGYSTPGGYSSKAVHPIALAKVMNIARMMKSEFGDKDYSLSAIGGVETGGDAAEFILL 335
Query: 738 GAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
GA VQ+C+ V + +V + L+ +
Sbjct: 336 GADTVQVCTGVMMHGYGLVKTLCSELKDFM 365
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL+ D V NV+PR
Sbjct: 53 DLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLEADKVKNVTPRYA 112
Query: 407 KGTTSRHLYGPEQGSFL---NIELISEK 431
K + G +G + NIELIS++
Sbjct: 113 KLRADAN--GSAKGQIIGWQNIELISDR 138
>gi|420243014|ref|ZP_14746988.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF080]
gi|398064249|gb|EJL55940.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF080]
Length = 437
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ASIM + W + E+ D +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 IVASIMVPCEEQAWKAILPLVEETEVDGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNI++I A+AA G D VS INT+S ++S+ D +P P+VG
Sbjct: 165 WCKQYTRMPVITKLTPNISDIRHPARAAKRGGTDAVSLINTISSIVSVDLDTFSPNPSVG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ + PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGITTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D +
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDEKGHR---------------------SLDDIICR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + ++ +
Sbjct: 322 AVPNVTDWQYLNLNYIAKAHIDQ 344
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S+ D+I +AV VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDIICRAVPNVTDWQYLNLNYIAKAHIDQDACIKCGRCHIACEDTSHQAITSMVDGVR 373
Query: 548 HQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEK 588
H + +EC GC LC+++ T EL ++T K
Sbjct: 374 HFEVMEEECVGCNLCVNVCPVENCITMEALPAGELDRRTGK 414
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ + N E K++++N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYT---------NLREMKEVKKN 99
>gi|338980149|ref|ZP_08631455.1| Dihydropyrimidine dehydrogenase [Acidiphilium sp. PM]
gi|338208925|gb|EGO96738.1| Dihydropyrimidine dehydrogenase [Acidiphilium sp. PM]
Length = 428
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 132/251 (52%), Gaps = 26/251 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ SIM + W + E+ GAD +ELN CPHGM ERGMG A GQ P+ V ++
Sbjct: 103 IVVSIMVPCEEASWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPDYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W R ++P VKLTPNIT+I A+AA G A VS INTV ++S+ D P P V
Sbjct: 163 WCRQFCRMPVIVKLTPNITDILKPARAARAGGAHAVSLINTVQSIVSVDLDLMAPTPTV- 221
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K + T+GG G A +P+ L+ V IA + PI GIGGI S A +FI GA V
Sbjct: 222 -KGVGTHGGYCGPAVKPIALRMVGEIARDRETAGLPISGIGGISSWHDAAEFIALGAGTV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
QIC+A + F +V+D + GL + +KG D +G+
Sbjct: 281 QICTAAMHYGFRIVEDMVDGLANWM-------------------DEKGYAT--IADFQGR 319
Query: 803 AIPNFGEYKKI 813
A+PNF ++ +
Sbjct: 320 AVPNFVHWQDL 330
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D G+AV ++ +LD + +A I+ + CI CG C++AC D+ +QAI +
Sbjct: 312 TIADFQGRAVPNFVHWQDLDLAWRSIARIDKEACIGCGLCHIACEDTAHQAIIAREADGR 371
Query: 550 ---AHVTDECTGCTLCLSI 565
V DEC GC LC I
Sbjct: 372 RVYEVVQDECVGCNLCSHI 390
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ V G+K PNPF LASAPPT V RA GWG V KT +V S
Sbjct: 1 MADLRVNFAGIKAPNPFWLASAPPTDKEYNVERALRAGWGGIVWKTVGEDPPIVNASSRY 60
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN--- 461
+ L G NIELI+++ + +A+ + I +++
Sbjct: 61 GGLAYNGQRLMG-----LNNIELITDRPLEVNLQEIKAVKKRWPDRAIVVSIMVPCEEAS 115
Query: 462 -------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+++ +DG+ L G P +S + +G AV +V +Y E+
Sbjct: 116 WKAILPLVEETGADGIELNFGCPHG---------MSERG-MGAAVGQVPDYVEM 159
>gi|265983446|ref|ZP_06096181.1| dihydropyrimidine dehydrogenase [Brucella sp. 83/13]
gi|306838284|ref|ZP_07471130.1| dihydroorotate dehydrogenase family protein [Brucella sp. NF 2653]
gi|264662038|gb|EEZ32299.1| dihydropyrimidine dehydrogenase [Brucella sp. 83/13]
gi|306406575|gb|EFM62808.1| dihydroorotate dehydrogenase family protein [Brucella sp. NF 2653]
Length = 436
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGG+ + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGVTTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|261218305|ref|ZP_05932586.1| dihydropyrimidine dehydrogenase [Brucella ceti M13/05/1]
gi|261320846|ref|ZP_05960043.1| dihydropyrimidine dehydrogenase [Brucella ceti M644/93/1]
gi|260923394|gb|EEX89962.1| dihydropyrimidine dehydrogenase [Brucella ceti M13/05/1]
gi|261293536|gb|EEX97032.1| dihydropyrimidine dehydrogenase [Brucella ceti M644/93/1]
Length = 436
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDVRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI-VKGTTSRHLYGPEQGSFLNIELISEK 431
R R L G NIELI+++
Sbjct: 61 RYGAMHGADRRLLG-----LNNIELITDR 84
>gi|254452317|ref|ZP_05065754.1| dihydroorotate dehydrogenase family protein [Octadecabacter
arcticus 238]
gi|198266723|gb|EDY90993.1| dihydroorotate dehydrogenase family protein [Octadecabacter
arcticus 238]
Length = 434
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 26/258 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W ++ E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 IIVSLMVPCEEQAWKDILPLVEDTGADGIELNFGCPHGMAERGMGSAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYSKPVIVKLTPNITDIRKPAAAAMRGGADAVSLINTINSITSVNLDSMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + VS I++ PI GIGG+ + A +FI G V
Sbjct: 225 GKG--THGGYCGPAVKPIAMSMVSEISRFEETKGLPISGIGGVTTWRDAAEFITLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + +KG + D G
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSQWM-------------------DEKGHTS--IADFMGA 321
Query: 803 AIPNFGEYKKIRENLITE 820
A+PN +++ + N + +
Sbjct: 322 AVPNTTDWQYLNLNYVAK 339
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT ++ V NV+ P
Sbjct: 1 MADLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGMEGPPVVNVNGP 60
Query: 404 R--IVKGTTSRHLYGPEQGSFLNIELISEK 431
R ++ G R L NIELI+++
Sbjct: 61 RYGVIYGADRRVL------GINNIELITDR 84
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ D +G AV T++ L+ A+IN D CI+CG+CY AC D+ +QAI +
Sbjct: 314 SIADFMGAAVPNTTDWQYLNLNYVAKAVINQDDCISCGRCYAACEDTSHQAIAMSEDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ + EC C LC+ +
Sbjct: 374 SVIDAECVACNLCVDV 389
>gi|225626809|ref|ZP_03784848.1| dihydroorotate dehydrogenase family protein [Brucella ceti str.
Cudo]
gi|261315465|ref|ZP_05954662.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M163/99/10]
gi|261316968|ref|ZP_05956165.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
gi|261757524|ref|ZP_06001233.1| dihydropyrimidine dehydrogenase [Brucella sp. F5/99]
gi|265988004|ref|ZP_06100561.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M292/94/1]
gi|340789928|ref|YP_004755392.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
gi|225618466|gb|EEH15509.1| dihydroorotate dehydrogenase family protein [Brucella ceti str.
Cudo]
gi|261296191|gb|EEX99687.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
gi|261304491|gb|EEY07988.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M163/99/10]
gi|261737508|gb|EEY25504.1| dihydropyrimidine dehydrogenase [Brucella sp. F5/99]
gi|264660201|gb|EEZ30462.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M292/94/1]
gi|340558386|gb|AEK53624.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
Length = 436
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDVRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|225851829|ref|YP_002732062.1| dihydropyrimidine dehydrogenase [Brucella melitensis ATCC 23457]
gi|256264655|ref|ZP_05467187.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|384210676|ref|YP_005599758.1| dihydroorotate dehydrogenase family protein [Brucella melitensis
M5-90]
gi|384407777|ref|YP_005596398.1| dihydropyrimidine dehydrogenase [Brucella melitensis M28]
gi|384444398|ref|YP_005603117.1| dihydropyrimidine dehydrogenase [Brucella melitensis NI]
gi|225640194|gb|ACO00108.1| dihydroorotate dehydrogenase family protein [Brucella melitensis
ATCC 23457]
gi|263095024|gb|EEZ18732.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|326408324|gb|ADZ65389.1| dihydropyrimidine dehydrogenase [Brucella melitensis M28]
gi|326538039|gb|ADZ86254.1| dihydroorotate dehydrogenase family protein [Brucella melitensis
M5-90]
gi|349742394|gb|AEQ07937.1| dihydropyrimidine dehydrogenase [Brucella melitensis NI]
Length = 436
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D +S INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDALSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWQDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ WG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKASWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|226505722|ref|NP_001142101.1| uncharacterized protein LOC100274265 [Zea mays]
gi|194707116|gb|ACF87642.1| unknown [Zea mays]
gi|223947605|gb|ACN27886.1| unknown [Zea mays]
gi|413938758|gb|AFW73309.1| hypothetical protein ZEAMMB73_476987 [Zea mays]
Length = 415
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI SIM YNK W EL ++ E++G DALE+N SCPHGM ER MG A GQD +++ +
Sbjct: 145 ILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCDLLEEVC 204
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ +P + K+TPNIT+IT A+ + + +GVSAINT+ +M ++ P P V
Sbjct: 205 GWINEKATVPVWAKMTPNITDITQPARISLKSGCEGVSAINTIMSVMGINLKTLRPEPCV 264
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-----FPILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V IA+M + IGG+++ + A +FI G
Sbjct: 265 --EGYSTPGGYSARAVHPIALAKVMQIARMMKEEFADGQSLSAIGGVETGNDAAEFILLG 322
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A VQ+C+ V + +V LQ +
Sbjct: 323 ADTVQVCTGVMIHGYPLVKKLCAELQDFM 351
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GL+ PNPF + S PP T ++++RAF+ GWG + KT SL + V NV+PR
Sbjct: 40 DLSVRVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAEKVINVTPRYA 99
Query: 407 KGTTSRHLYGPEQGSFL---NIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN-- 461
K + G G + NIELIS++ F+ + + + +++ E N
Sbjct: 100 KLRAEPN--GAAMGRIIGWQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEYNKA 157
Query: 462 -----LKKLNSDGV-------SLQNGLPKRQINTPV 485
++++ GV S +G+P+R++ V
Sbjct: 158 AWHELIERVEESGVDALEINFSCPHGMPERKMGAAV 193
>gi|429219880|ref|YP_007181524.1| dihydroorotate dehydrogenase family protein [Deinococcus
peraridilitoris DSM 19664]
gi|429130743|gb|AFZ67758.1| dihydroorotate dehydrogenase family protein [Deinococcus
peraridilitoris DSM 19664]
Length = 459
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S M + W ++ ++ E GAD +ELN CPHGM ERGMG A GQ PE I+
Sbjct: 101 VVVSAMVESDPRAWADIVRRIEDTGADGIELNYGCPHGMSERGMGSAVGQVPEYCEQITR 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
WV +IP VKLTPNIT+IT A+A G A +S INT++ +++++ D P+VG
Sbjct: 161 WVTEVARIPVIVKLTPNITDITHPARAGVAGGAQALSLINTINSIINVNLDTFELTPSVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAH 740
++GG +G A +P+ L +S +A++ PI G+GGI + A +F+ GA
Sbjct: 221 --GYGSHGGYAGPAVKPIALNMLSEVARVAEVRARGLPISGMGGIQTWRDAAEFLLLGAT 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
++Q+C+AV + F +++D GL L
Sbjct: 279 SLQVCTAVMHYGFRIIEDLTDGLSNWL 305
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S++ G++ PNPF LASAPP+ + V++AFE GWG AV KT V N+S R
Sbjct: 1 MADLSIDFAGIRSPNPFWLASAPPSNSGYQVQKAFEAGWGGAVWKTIGAP---VLNISNR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
G S +YG N+ELIS++
Sbjct: 58 Y--GGLS--VYGQRLVGLNNMELISDR 80
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 22/98 (22%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT------- 542
SV DVIG ++ +V + + D VA IN D CI C CY+ACND+ +Q I
Sbjct: 312 SVHDVIGLSLPKVGAFGDFDLAYSAVARINPDKCIQCNLCYVACNDTAHQCIDLVSPEGI 371
Query: 543 -----FHPETHQAHVTD----------ECTGCTLCLSI 565
+ P + V D +C GC LC ++
Sbjct: 372 RVDPGYDPRVNGRQVADSRPTPSVREEDCVGCALCYNV 409
>gi|17987922|ref|NP_540556.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|260563371|ref|ZP_05833857.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|265990421|ref|ZP_06102978.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994249|ref|ZP_06106806.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|17983659|gb|AAL52820.1| dihydropyrimidine dehydrogenase (nadp+) [Brucella melitensis bv. 1
str. 16M]
gi|260153387|gb|EEW88479.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|262765362|gb|EEZ11151.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|263001205|gb|EEZ13780.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
Length = 436
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D +S INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDALSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWQDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|260434049|ref|ZP_05788020.1| dihydroorotate dehydrogenase family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417877|gb|EEX11136.1| dihydroorotate dehydrogenase family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 434
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + + + GAD +ELN CPHGM ERGMG A GQ P+ + ++
Sbjct: 105 LIASIMVPCEEEAWKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPDYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKKYYDRPVIVKLTPNITDIRKPAAAARNGGADAVSLINTINSITSVNLDTFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L VS IA+ PI GIGG+ + A +F+ G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALSMVSEIARAEATQGLPISGIGGVTTWRDAAEFMALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F ++D+ GL +
Sbjct: 283 QVCTAAMTYGFKIIDELTAGLSQWM 307
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
+V +++G+AV VT++ L+ A I+ D CI CG+CY AC D+ +QAI+ P+
Sbjct: 314 NVPEIVGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCGRCYAACEDTSHQAISMSPDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 EVIDEECVACNLCVDV 389
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G++ PNP+ LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLKTNFLGIESPNPYWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLVGLNNIELITDR 84
>gi|407973728|ref|ZP_11154639.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor indicus
C115]
gi|407430788|gb|EKF43461.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor indicus
C115]
Length = 437
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M ++ W + E+ AD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LVVSLMVPCEENAWKAILPLVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYVEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P KLTPNIT++ A+AA+ G D VS INT++ + S+ D P P +
Sbjct: 165 WCKQNTRMPVITKLTPNITDVRKPARAAHAGGTDAVSLINTINSITSVDLDDFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ L V+ IA+ PI GIGGI + A +F+ G+ V
Sbjct: 225 GKG--THGGYCGPAVKPIALNMVAEIARDPAMAGLPISGIGGITTWRDAAEFLVLGSGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ GL+ + K D G+
Sbjct: 283 QVCTAAMTYGFKIVEEMAEGLKNWMDAKGHA---------------------TLDDVIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N IT+ + +
Sbjct: 322 ATPNVTDWQYLNLNYITKARIDQ 344
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 78/186 (41%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF GWG V KT V NV+ P
Sbjct: 1 MADIRSNFVGIKSPNPFWLASAPPTDKAYNVERAFRAGWGGVVWKTLGEAGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L NIELI+++ ++ N E K+++ N L
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYL---------NLTEIKRVKRNWPDRAL 105
Query: 457 ITELN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+ L +++ +DG+ L G P + +G AV +V
Sbjct: 106 VVSLMVPCEENAWKAILPLVEETEADGIELNFGCPHGM----------SERGMGAAVGQV 155
Query: 503 TNYTEL 508
Y E+
Sbjct: 156 PEYVEM 161
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ DVIG+A VT++ L+ A I+ D+CI CG+C++AC D+ +QAIT + +
Sbjct: 314 TLDDVIGRATPNVTDWQYLNLNYITKARIDQDLCIKCGRCHIACEDTSHQAITAIVDGAR 373
Query: 550 AHVT--DECTGCTLCLSI 565
+EC GC LC+++
Sbjct: 374 RFEVKEEECVGCNLCVNV 391
>gi|239831126|ref|ZP_04679455.1| dihydroorotate dehydrogenase family protein [Ochrobactrum
intermedium LMG 3301]
gi|444309524|ref|ZP_21145161.1| dihydropyrimidine dehydrogenase subunit B [Ochrobactrum intermedium
M86]
gi|239823393|gb|EEQ94961.1| dihydroorotate dehydrogenase family protein [Ochrobactrum
intermedium LMG 3301]
gi|443487191|gb|ELT49956.1| dihydropyrimidine dehydrogenase subunit B [Ochrobactrum intermedium
M86]
Length = 436
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVAMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+ A+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARGAHAAGTDAVSLINTINSIVSVDLDSMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETRGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D G AV V+++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDFRGMAVGHVSDWQYLNLNYVTKARINQDLCIKCGRCHIACEDTSHQAITNLVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|373957954|ref|ZP_09617914.1| dihydroorotate dehydrogenase family protein [Mucilaginibacter
paludis DSM 18603]
gi|373894554|gb|EHQ30451.1| dihydroorotate dehydrogenase family protein [Mucilaginibacter
paludis DSM 18603]
Length = 422
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W EL K+ + GA LELN CPHGM ERGMG A GQDPE+ R +
Sbjct: 101 MVVSLMADNTRESWHELIKQVQDTGAHGLELNFGCPHGMTERGMGAAVGQDPEIARMVVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV +IP KLTPN+ ++ A+ G + +S INT+ + + D P P VG
Sbjct: 161 WVMEVAQIPVITKLTPNVHSVVPTGLASVLGGTNALSLINTIQSVTGIDLDTLIPNPNVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K + +GG G A +P+ LK +++I++ + P+ GIGGI + A++F+ GA V
Sbjct: 221 GK--SAFGGYCGPAVKPIALKMLTTISQNEITRRVPVSGIGGISTWKDAVEFMLLGASNV 278
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+AV F +++D GL +
Sbjct: 279 QVCTAVMKHGFRIIEDLCEGLSYWM 303
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS + G+K PNPF LASAPPT V RAFE GWG V KT Q V NVS R
Sbjct: 1 MADISSDFLGIKSPNPFWLASAPPTDKKINVLRAFEAGWGGVVWKTLGTQ---VKNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
++ +G F NIELIS++
Sbjct: 58 Y----SAVDYHGSRVMGFNNIELISDR 80
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF---HPE 546
++ D IG+++ ++N+ +LD V+A IN D C++CG CY+AC D+ +Q+I P
Sbjct: 310 TLNDFIGKSIPAMSNWEDLDINYHVIANINQDKCVHCGLCYIACEDTSHQSIALDYGKPY 369
Query: 547 THQAHVTDECTGCTLC 562
+EC GC LC
Sbjct: 370 NKYTIKEEECVGCNLC 385
>gi|84686032|ref|ZP_01013928.1| Dihydroorotate dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
gi|84666125|gb|EAQ12599.1| Dihydroorotate dehydrogenase [Rhodobacterales bacterium HTCC2654]
Length = 338
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 122/218 (55%), Gaps = 9/218 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++D W ++ + + GAD +ELN CPHGM ERGMG A GQ PE V I+
Sbjct: 1 MVVSLMVPLDEDAWRKILDRVGETGADGVELNFGCPHGMAERGMGSAVGQVPEYVGQITQ 60
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
WV+ +P VKLTPNIT+I A AA +G AD VS INT++ + S++ D P P +
Sbjct: 61 WVKKHSDLPCIVKLTPNITDIRQPALAAKQGGADAVSMINTINSITSVNLDAMCPEPMI- 119
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
L T+GG G A +P+ + V+ +A+ PI IGGI + A +F+ GA
Sbjct: 120 -DGLGTHGGYCGPAVKPIAMNMVAEVARWEKTAGIPISAIGGISTWRDAAEFMALGAGNA 178
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL----YLKSTQLKG 776
Q+C+A F +V + +G+ + Y K++ G
Sbjct: 179 QVCTAAMTYGFRIVKEMCSGMSQWMDEKGYTKTSDFIG 216
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 493 DVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHV 552
D IG A RVT++ L+ A I+ D+CI+CG+C+ AC D+ +QAI +
Sbjct: 213 DFIGMATPRVTDWQHLNLDYVTKAEIDQDLCISCGRCFAACEDTSHQAIAMSEDRTFTVK 272
Query: 553 TDECTGCTLCLSI 565
DEC C LC+++
Sbjct: 273 DDECVACNLCVNV 285
>gi|261751635|ref|ZP_05995344.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261741388|gb|EEY29314.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 5 str. 513]
Length = 436
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKATLPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|115448547|ref|NP_001048053.1| Os02g0736400 [Oryza sativa Japonica Group]
gi|46390439|dbj|BAD15901.1| putative dihydropyrimidine dehydrogenase [Oryza sativa Japonica
Group]
gi|70906540|gb|AAZ14951.1| putative dihydroorotate dehydrogenase [Oryza sativa Japonica Group]
gi|113537584|dbj|BAF09967.1| Os02g0736400 [Oryza sativa Japonica Group]
gi|218191531|gb|EEC73958.1| hypothetical protein OsI_08851 [Oryza sativa Indica Group]
gi|222623634|gb|EEE57766.1| hypothetical protein OsJ_08303 [Oryza sativa Japonica Group]
Length = 414
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILI SIM YNK W EL ++ E++G DALE+N SCPHGM ER MG A GQD +++ +
Sbjct: 144 ILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCDLLEEVC 203
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ +P + K+TPNIT+IT A+ + + +GVSAINT+ +M ++ P P V
Sbjct: 204 GWINEKATVPVWAKMTPNITDITKPARISLKSGCEGVSAINTIMSVMGINLKTLRPEPCV 263
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-----NFPILGIGGIDSADVALQFIQAG 738
+ +T GG S A P+ L V IA+M + IGG+++ + A +FI G
Sbjct: 264 --EGYSTPGGYSARAVHPIALAKVMQIARMMKEEFADGQSLSAIGGVETGNDAAEFILLG 321
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A VQ+C+ V + +V LQ +
Sbjct: 322 ADTVQVCTGVMMHGYGLVKKLCAELQDFM 350
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 25/159 (15%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL + V NV+PR
Sbjct: 39 DLSVRVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAEKVINVTPRYA 98
Query: 407 K------GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
+ G+T + G + NIELIS++ F+ + + + +++ E
Sbjct: 99 RLRADPNGSTKSPIIG-----WQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEY 153
Query: 461 N-------LKKLNSDGV-------SLQNGLPKRQINTPV 485
N ++++ GV S +G+P+R++ V
Sbjct: 154 NKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAV 192
>gi|398818126|ref|ZP_10576724.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
BC25]
gi|398028572|gb|EJL22079.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
BC25]
Length = 425
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M + ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P+++R
Sbjct: 101 LIASLMVEHKQEAWHEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
WV+ + P VKLTPNIT+I A+AA +G AD +S INT++ LM + + P P V
Sbjct: 161 WVKEVAQTPVIVKLTPNITDIRFTARAASQGGADAISMINTINSLMGVDLEKWLPIPHVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV--ALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P I G +D ++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-DPKVGIPISGIGGISDWRDTVEFLLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D I GL L
Sbjct: 278 QVCTAAMHHGFRIVEDMIDGLNNYL 302
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G++ PNPF LASAPPT + V+RAFE GWG AV KT + + NV+ R
Sbjct: 1 MADLSINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIINVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI++K
Sbjct: 58 F----AGLNFGGQRVFGFNNIELITDK 80
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV D++G+AV +++ L+ +VVA I+++ CINC KC++AC D+ +Q I P+
Sbjct: 307 IASVMDIVGKAVHTYSDWGHLNLNYKVVARIHEETCINCNKCHIACEDTSHQCIDIVPDA 366
Query: 548 HQAH-----VTDECTGCTLCLSILIASIMC 572
++C GC LC SI+C
Sbjct: 367 ATGKERLVVREEDCVGCNLC------SIVC 390
>gi|160898303|ref|YP_001563885.1| dihydropyrimidine dehydrogenase [Delftia acidovorans SPH-1]
gi|160363887|gb|ABX35500.1| dihydroorotate dehydrogenase family protein [Delftia acidovorans
SPH-1]
Length = 439
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 130/258 (50%), Gaps = 30/258 (11%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M ++ W + E GAD LELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 LIASLMVPCVEESWKRILPMVEDTGADGLELNFGCPHGMSERGMGAAVGQVPEYIQMVTQ 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG---NPWPA 682
W + ++P VKLTPNIT++ A+AA G AD VS INT++ LM ++ D +P
Sbjct: 164 WCKQYSRLPVIVKLTPNITDVRFPARAAKAGGADAVSLINTINSLMGVNLDTLVMHP--- 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
T ++GG G A +P+ V+ IA+ PI GIGGI + A ++I G
Sbjct: 221 -STDGQGSHGGYCGPAVKPIAQNMVAEIARDPQTAGLPISGIGGITTWKDAAEYIALGCG 279
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
VQ+C+A F +V D GL Y+ + + D +
Sbjct: 280 NVQVCTAAMVYGFRIVQDMCDGLSN--YMDAHGFA-------------------RIEDFQ 318
Query: 801 GKAIPNFGEYKKIRENLI 818
G+A+P ++K + N I
Sbjct: 319 GRAVPTVRDWKDLNLNHI 336
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--TH 548
++D G+AV V ++ +L+ A+IN D CI CG+C++AC D+ +QAITF E
Sbjct: 314 IEDFQGRAVPTVRDWKDLNLNHIEKAVINQDSCIQCGRCHVACEDTSHQAITFSKEGGVR 373
Query: 549 QAHVTD-ECTGCTLCLSI 565
+ V D EC GC LC+SI
Sbjct: 374 RFEVDDTECVGCNLCVSI 391
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS G+ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADISSRFLGISSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPHVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEK 431
R + G NIELI+++
Sbjct: 61 YSTLMAQDRRVMG-----LNNIELITDR 83
>gi|226312824|ref|YP_002772718.1| dihydropyrimidine dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|226095772|dbj|BAH44214.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 425
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 116/205 (56%), Gaps = 6/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M + ++ W E+ KK E G D LELN CPHGM ERGMG A GQ P+++R
Sbjct: 101 LIASLMVEHKREAWHEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
WV+ + P VKLTPNIT+I A+AA G AD +S INT++ LM + D P P V
Sbjct: 161 WVKEVAQTPVIVKLTPNITDIRFTARAASLGGADAISMINTINSLMGVDLDKWLPIPHVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV--ALQFIQAGAHAV 742
K +GG G A +P+ L V+ A+ P I G +D ++F+ GA V
Sbjct: 221 GKG--AHGGYCGPAVKPIALNMVAECAR-DPKVGIPISGIGGISDWRDTVEFLLMGATGV 277
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A + F +V+D I GL L
Sbjct: 278 QVCTAAMHHGFRIVEDMIDGLTNYL 302
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G++ PNPF LASAPPT + V+RAFE GWG AV KT + + NV+ R
Sbjct: 1 MADLSINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTLG---EPIINVTSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ G F NIELI++K
Sbjct: 58 F----AGLNFGGQRVFGFNNIELITDK 80
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE- 546
I SV D++G+AV +++ L+ +VVA I+++ CINC KC++AC D+ +Q I P+
Sbjct: 307 IASVMDIVGKAVHTYSDWGYLNLNYKVVARIHEETCINCNKCHIACEDTSHQCIDIVPDA 366
Query: 547 -THQAHVT---DECTGCTLCLSILIASIMC 572
T + + ++C GC LC SI+C
Sbjct: 367 VTGKERLVVREEDCVGCNLC------SIVC 390
>gi|407937547|ref|YP_006853188.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. KKS102]
gi|407895341|gb|AFU44550.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. KKS102]
Length = 437
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 120/225 (53%), Gaps = 10/225 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 MIVSLMVPCVEESWKNILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTA 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG---NPWPA 682
W + K+P VKLTPNIT++ A+AA G AD VS INT++ +M + D +P
Sbjct: 164 WCKHYSKLPVIVKLTPNITDVRHPARAAKAGGADAVSLINTINSIMGVDLDRMVMSP--- 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
T ++GG G A +P+ L V+ IA+ PI GIGGI + A ++I G
Sbjct: 221 -STDGWGSHGGYCGPAVKPIALNMVAEIARDAQTAGLPISGIGGITTWRDAAEYIALGCG 279
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPT 784
VQ+C+A F +V D GL + L + GQ+ PT
Sbjct: 280 TVQVCTAAMVYGFKIVQDMCDGLSNFMDEHGYATLDDFKGQAVPT 324
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D GQAV V ++ L+ A+IN D CI CG+C++ C D+ +QAITF E
Sbjct: 313 TLDDFKGQAVPTVKDWKNLNLNHIEKAVINQDACIQCGRCHVVCEDTSHQAITFTKEGGV 372
Query: 548 HQAHVTD-ECTGCTLCLSI 565
+ + + EC GC LC+SI
Sbjct: 373 RKFEINEAECVGCNLCVSI 391
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI G++ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSNFLGIQSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPPVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ R + G NIELI+++ N E K+++ N
Sbjct: 61 YSTLMSQDRRVIG-----LNNIELITDRPLHT---------NLEEIKRVKRN 98
>gi|365092487|ref|ZP_09329635.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. NO-1]
gi|363415611|gb|EHL22738.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. NO-1]
Length = 437
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 119/225 (52%), Gaps = 10/225 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 MIVSLMVPCEEQSWKNILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTA 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG---NPWPA 682
W + K+P VKLTPNIT++ A+AA G AD VS INT++ +M + D +P
Sbjct: 164 WCKHYSKLPVIVKLTPNITDVRHPARAAKAGGADAVSLINTINSIMGVDLDRMVMSP--- 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
T ++GG G A +P+ L V+ IA+ PI GIGGI + A ++I G
Sbjct: 221 -STDGWGSHGGYCGPAVKPIALNMVAEIARDAQTAGLPISGIGGITTWRDAAEYIALGCG 279
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPT 784
VQ+C+A F +V D GL + L + GQ+ PT
Sbjct: 280 TVQVCTAAMVYGFKIVQDMCDGLSNFMDEHGYATLDDFKGQAVPT 324
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D GQAV V ++ L+ A+IN D CI CG+C++ C D+ +QAITF E
Sbjct: 313 TLDDFKGQAVPTVKDWKNLNLNHIEKAVINQDACIQCGRCHVVCEDTSHQAITFTKEGGV 372
Query: 548 HQAHVTD-ECTGCTLCLSI 565
+ + + EC GC LC+SI
Sbjct: 373 RRFEINEAECVGCNLCVSI 391
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI G++ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSNFLGIQSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPPVVNVNGPR 60
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
+ R + G NIELI+++
Sbjct: 61 YSTLMSQDRRVIG-----LNNIELITDR 83
>gi|306842448|ref|ZP_07475099.1| dihydroorotate dehydrogenase family protein [Brucella sp. BO2]
gi|306287304|gb|EFM58784.1| dihydroorotate dehydrogenase family protein [Brucella sp. BO2]
Length = 436
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPMPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + A +FI V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGGITTWRDAAEFIALSCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|333915496|ref|YP_004489228.1| dihydroorotate dehydrogenase family protein [Delftia sp. Cs1-4]
gi|154705703|gb|ABS84237.1| putative dihydropyrimidine dehydrogenase [Delftia sp. I24]
gi|333745696|gb|AEF90873.1| dihydroorotate dehydrogenase family protein [Delftia sp. Cs1-4]
Length = 439
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 130/258 (50%), Gaps = 30/258 (11%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIAS+M ++ W + E GAD LELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 LIASLMVPCVEESWKRILPMVEDTGADGLELNFGCPHGMSERGMGAAVGQVPEYIQMVTQ 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG---NPWPA 682
W + ++P VKLTPNIT++ A+AA G AD VS INT++ LM ++ D +P
Sbjct: 164 WCKQYSRLPVIVKLTPNITDVRFPARAAKAGGADAVSLINTINSLMGVNLDTLVMHP--- 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
T ++GG G A +P+ V+ IA+ PI GIGGI + A ++I G
Sbjct: 221 -STDGQGSHGGYCGPAVKPIAQNMVAEIARDPQTAGLPISGIGGITTWKDAAEYIALGCG 279
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
VQ+C+A F +V D GL Y+ + + D +
Sbjct: 280 NVQVCTAAMVYGFRIVQDMCDGLSN--YMDAHGFA-------------------RIEDFQ 318
Query: 801 GKAIPNFGEYKKIRENLI 818
G+A+P ++K + N I
Sbjct: 319 GRAVPTVRDWKDLNLNHI 336
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--TH 548
++D G+AV V ++ +L+ A+IN D CI CG+C++AC D+ +QAITF E
Sbjct: 314 IEDFQGRAVPTVRDWKDLNLNHIDKAVINQDSCIQCGRCHVACEDTSHQAITFSKEGGVR 373
Query: 549 QAHVTD-ECTGCTLCLSI 565
+ V D EC GC LC+SI
Sbjct: 374 RFEVDDTECVGCNLCVSI 391
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DIS G+ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADISSRFLGISSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPHVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEK 431
R + G NIELI+++
Sbjct: 61 YSTLMAQDRRVMG-----LNNIELITDR 83
>gi|375143822|ref|YP_005006263.1| dihydropyrimidine dehydrogenase (NADP+), dihydrouracil
dehydrogenase (NAD+), dihydroorotate oxidase B,
catalytic subunit [Niastella koreensis GR20-10]
gi|361057868|gb|AEV96859.1| dihydropyrimidine dehydrogenase (NADP+), dihydrouracil
dehydrogenase (NAD+), dihydroorotate oxidase B,
catalytic subunit [Niastella koreensis GR20-10]
Length = 422
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W EL + E GA LELN CPHGM ERGMG GQDPE+ R +
Sbjct: 101 MIVSLMADNTREKWHELIAQVEDTGAHGLELNFGCPHGMTERGMGAVVGQDPEIARLVVE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV IP KLTPN+ ++ KA+ E ++ +S INT+ + + D P P V
Sbjct: 161 WVMEKATIPVITKLTPNVHSVVPTGKASVEAGSNALSLINTIQSVTGIDLDTFVPNPYVA 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K + +GG G A +P+ LK +++I++ + PI GIGG+ + A++F+ GA V
Sbjct: 221 GK--SVFGGYCGPAVKPIALKMLATISQDPVTSKVPISGIGGVSTWKDAVEFMLLGATTV 278
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V+D GL +
Sbjct: 279 QVCTAAMKHGFRIVEDMCEGLNNWM 303
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFH---PE 546
++ D IG++V +T + ELD +VA I+ + CI+CG CY+AC D +Q+I P
Sbjct: 310 AINDFIGKSVPHLTQWEELDINYHIVANIDQNKCIHCGLCYIACEDGSHQSINLQYGKPY 369
Query: 547 THQAHVTDECTGCTLC 562
DEC GC LC
Sbjct: 370 NTYTIKEDECVGCNLC 385
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ +I+ G+K PNPF LASAPPT V RAFE GWG V KT Q V NVS R
Sbjct: 1 MANIAANFLGIKSPNPFWLASAPPTDKKINVLRAFEAGWGGVVWKTLGSQ---VKNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
++ + G + F NIELIS++
Sbjct: 58 Y----SAVNYNGSKVMGFNNIELISDR 80
>gi|126734202|ref|ZP_01749949.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter
sp. CCS2]
gi|126717068|gb|EBA13932.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter
sp. CCS2]
Length = 434
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 29/267 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + W ++ + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 MIVSIMVPCEEQAWKDILPRVAATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYDKPVIVKLTPNITDVRKPAAAAMRGGADAVSLINTINSITSVNLDTMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + VS IA+ PI GIGG+ + A +FI G V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMSMVSEIARNPETHGLPISGIGGVTTWRDAAEFISLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ +GL + +KG + + + G+
Sbjct: 283 QVCTAAMTYGFKIVEEMKSGLSQWM-------------------DEKGYTSVE--EVIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSD 829
A+PN +++ + N + + K+N D
Sbjct: 322 AVPNVTDWQYLNLNYVAK---AKINQD 345
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV++VIG+AV VT++ L+ A IN D CI CG+CY AC D+ +QAI +
Sbjct: 314 SVEEVIGRAVPNVTDWQYLNLNYVAKAKINQDDCIKCGRCYAACEDTSHQAIAMSDDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 TVIDEECVACNLCVDV 389
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDR 84
>gi|409418679|ref|ZP_11258656.1| dihydropyrimidine dehydrogenase subunit B, partial [Pseudomonas sp.
HYS]
Length = 301
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 109/184 (59%), Gaps = 5/184 (2%)
Query: 587 EKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNI 646
E GAD +ELN CPHGM ERGMG A GQ PE V ++ W ++ +P VKLTPNIT+I
Sbjct: 1 EPPGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTHGSLPVIVKLTPNITDI 60
Query: 647 TDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVGTKKLTTYGGVSGNATRPMGLK 705
A+AA+ G AD VS INT++ + S+ + P VG ++T+GG G+A +P+ L
Sbjct: 61 RQSARAAHRGGADAVSLINTINSITSVDLERMVAHPIVG--DMSTHGGYCGSAVKPIALN 118
Query: 706 AVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763
V+ IA+ PI GIGGI S A +F+ G AVQ+C+A F +VD+ GL
Sbjct: 119 MVAEIARDPATHGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFRIVDEMKDGL 178
Query: 764 QTLL 767
+
Sbjct: 179 SRWM 182
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S+++ G+AV T++ LD QVVA IN CINCG+C++AC D+ +QAI +
Sbjct: 189 SLQEFQGRAVGHTTDWKYLDINYQVVAKINQQACINCGRCHIACEDTSHQAIANLKQADG 248
Query: 547 THQAHVTD-ECTGCTLC 562
+H+ V D EC GC LC
Sbjct: 249 SHRYEVIDAECVGCNLC 265
>gi|395007457|ref|ZP_10391197.1| dihydroorotate dehydrogenase family protein [Acidovorax sp. CF316]
gi|394314535|gb|EJE51432.1| dihydroorotate dehydrogenase family protein [Acidovorax sp. CF316]
Length = 437
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 4/222 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 MIVSLMVPCEEQSWKSILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTA 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
W + ++P VKLTPNIT++ A+AA G AD VS INT++ +M + D + T
Sbjct: 164 WCKHYSRLPVIVKLTPNITDVRHPARAAKAGGADAVSLINTINSIMGVDLDRMTM-SPST 222
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
++GG G A +P+ L V+ IA+ PI GIGGI + A ++I G VQ
Sbjct: 223 DGWGSHGGYCGPAVKPIALNMVAEIARDAQTAGLPISGIGGITTWRDAAEYIALGCGTVQ 282
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPT 784
+C+A F +V D GL + + + + GQ+ PT
Sbjct: 283 VCTAAMVYGFKIVQDMCDGLSNFMDEHGYETIADFQGQAVPT 324
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D GQAV V ++ L+ A+IN D CI CG+C++ C D+ +QAITF E
Sbjct: 313 TIADFQGQAVPTVKDWKNLNLNHIDKAVINQDACIQCGRCHVVCEDTSHQAITFTKEGGV 372
Query: 548 HQAHVTD-ECTGCTLCLSI 565
+ V D EC GC LC+SI
Sbjct: 373 RKFEVNDAECVGCNLCVSI 391
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI G+ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSNFLGISSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPSVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ RH+ G NIELI+++ N E K+++ N
Sbjct: 61 YSTLMSQDRHVIG-----LNNIELITDRPLHT---------NLEEIKRVKRN 98
>gi|15229529|ref|NP_188408.1| pyrimidine 1 [Arabidopsis thaliana]
gi|9294485|dbj|BAB02704.1| senescencs-related protein; dihydroorotate dehydrogenase-like
protein [Arabidopsis thaliana]
gi|14334712|gb|AAK59534.1| putative dehydrogenase [Arabidopsis thaliana]
gi|16323430|gb|AAL15209.1| putative dehydrogenase [Arabidopsis thaliana]
gi|24850451|gb|AAN64919.1| putative dehydrogenase [Arabidopsis thaliana]
gi|332642489|gb|AEE76010.1| pyrimidine 1 [Arabidopsis thaliana]
Length = 426
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 8/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIAS+M YNK W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 156 ILIASVMEEYNKTAWEELIDRVEQTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVC 215
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT+ A+ + + +G++AINT+ +M + P P V
Sbjct: 216 GWINAKATVPVWAKMTPNITDITEPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCV 275
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-----PNFPILGIGGIDSADVALQFIQAG 738
+ +T GG S A RP+ L V +IAKM + + GIGG+++ A +FI G
Sbjct: 276 --EGYSTPGGYSYKAVRPIALAKVMNIAKMMKSEFSEDRSLSGIGGVETGYDAAEFILLG 333
Query: 739 AHAVQICSAVQNQDFTVVDDYITGLQTLL 767
++ VQ+C+ V + V L+ +
Sbjct: 334 SNTVQVCTGVMMHGYGHVKTLCAELKDFM 362
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 51 DLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYA 110
Query: 407 K-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN---- 461
+ T S + + NIELIS++ F+ + + + +++ E N
Sbjct: 111 RLRTGSNGSAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAW 170
Query: 462 ---LKKLNSDGV-------SLQNGLPKRQINTPV 485
+ ++ GV S +G+P+R++ V
Sbjct: 171 EELIDRVEQTGVDALEINFSCPHGMPERRMGAAV 204
>gi|351730366|ref|ZP_08948057.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax radicis N35]
Length = 437
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 10/225 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M + W + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 MIVSLMVPCEEQSWKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTA 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG---NPWPA 682
W + K+P VKLTPNIT++ A+AA G AD VS INT++ +M + D +P
Sbjct: 164 WCKHYSKLPVIVKLTPNITDVRQPARAAKAGGADAVSLINTINSIMGVDLDRMVMSP--- 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
T ++GG G A +P+ L V+ IA+ PI GIGGI + A ++I G
Sbjct: 221 -STDGWGSHGGYCGPAVKPIALNMVAEIARDAQTAGLPISGIGGITTWRDAAEYIALGCG 279
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPPT 784
VQ+C+A F +V D GL + + + GQ+ PT
Sbjct: 280 TVQVCTAAMVYGFKIVQDMCDGLSNFMDEHGYATIDDFKGQAVPT 324
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D GQAV V ++ L+ A+IN D CI CG+C++ C D+ +QAITF +
Sbjct: 313 TIDDFKGQAVPTVKDWKNLNLNHIEKAVINQDACIQCGRCHVVCEDTSHQAITFTKDGGV 372
Query: 548 HQAHVTD-ECTGCTLCLSI 565
+ + + EC GC LC+SI
Sbjct: 373 RKFEINEAECVGCNLCVSI 391
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI G++ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSNFLGIQSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPAVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ R + G NIELI+++ N E K+++ N
Sbjct: 61 YSTLMSQDRRVIG-----LNNIELITDRPLHT---------NLEEIKRVKRN 98
>gi|339627610|ref|YP_004719253.1| dihydropyrimidine dehydrogenase [Sulfobacillus acidophilus TPY]
gi|379008022|ref|YP_005257473.1| dihydroorotate dehydrogenase family protein [Sulfobacillus
acidophilus DSM 10332]
gi|339285399|gb|AEJ39510.1| dihydropyrimidine dehydrogenase [Sulfobacillus acidophilus TPY]
gi|361054284|gb|AEW05801.1| dihydroorotate dehydrogenase family protein [Sulfobacillus
acidophilus DSM 10332]
Length = 415
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 4/213 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M N D W ++ K+ E GAD +ELN CPHGM ERGMG GQ PE I+
Sbjct: 101 VIVSMMFESNPDVWRDMVKRVEDTGADGIELNFGCPHGMSERGMGSVVGQVPEYTEQITR 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
+V + +IP VKLTPN+T++ A+AA +G A VS INT++ +M + D P P V
Sbjct: 161 YVTAVSQIPVIVKLTPNVTDVRYPARAAVKGGAQAVSLINTINSVMGVDLDTWMPRPQVD 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
+ ++GG G A +P+ L V+S+ + P+ GIGGI++ A +F+ GA VQ
Sbjct: 221 GRG--SHGGYCGPAVKPIALHMVASVYNDLGVPVPVSGIGGIETWQDAAEFMLLGAGTVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKG 776
+C+A + F ++ + GL L Q G
Sbjct: 279 VCTAAMHYGFRIIREMTEGLSAYLDQHGLQKVG 311
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+SV G++ PNPF LAS P T + V +AF+ GWG AV KT + V NVS R
Sbjct: 1 MADLSVNFAGIRAPNPFWLASGPLTNTAYQVEKAFDEGWGGAVWKTVG---EPVINVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK------------------TAFIFFFLFQAIPNF 446
+ S G NIELIS++ A I +F++ P+
Sbjct: 58 L----ASIDYGGRRMMGLNNIELISDRPIEDNLREIAAVKRHYPQHAVIVSMMFESNPD- 112
Query: 447 GEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYT 506
+ +++ ++ +DG+ L G P +S + +G V +V YT
Sbjct: 113 -----VWRDMVKR--VEDTGADGIELNFGCPHG---------MSERG-MGSVVGQVPEYT 155
Query: 507 E 507
E
Sbjct: 156 E 156
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 491 VKDVIGQAVQRVTNYTEL--DNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETH 548
V D++GQA RV ++ +L ++VA I+ + CI C C++AC+D +Q I P
Sbjct: 310 VGDLVGQAANRVGDWNDLRLSTNYRMVARIHPERCIGCNLCHVACDDGAHQCIDRIPGQK 369
Query: 549 QAHVTD-ECTGCTLC 562
V + +C GC LC
Sbjct: 370 APVVRESDCVGCNLC 384
>gi|390448887|ref|ZP_10234502.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
aquibiodomus RA22]
gi|389665261|gb|EIM76733.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
aquibiodomus RA22]
Length = 436
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 131/263 (49%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M + W + E+ AD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LVVSLMVPCEEAAWKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYVEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P KLTPNIT++ A+AA+ G D VS INT++ + + D P P +
Sbjct: 165 WCKQTTRMPVITKLTPNITDVRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETAGLPISGIGGVTTWRDAAEFLALGAGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ I GL+ + K D G+
Sbjct: 283 QVCTAAMTYGFKIVEEMIEGLENWMDAKGHA---------------------TLDDVIGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N +T+ + +
Sbjct: 322 ATPNVTDWQYLNLNYVTKARIDQ 344
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ DVIG+A VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDVIGRATPNVTDWQYLNLNYVTKARIDQDQCIKCGRCHIACEDTSHQAITAMVDGKR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIEEECVGCNLCVNV 391
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 47/186 (25%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRSNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L NIELI+++ ++ N E K++++N L
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYL---------NLREIKQVKKNWPDRAL 105
Query: 457 ITELN--------------LKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+ L +++ +DG+ L G P +S + +G AV +V
Sbjct: 106 VVSLMVPCEEAAWKAILPLVEETEADGIELNFGCPHG---------MSERG-MGSAVGQV 155
Query: 503 TNYTEL 508
Y E+
Sbjct: 156 PEYVEM 161
>gi|261213313|ref|ZP_05927594.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 3 str. Tulya]
gi|260914920|gb|EEX81781.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 3 str. Tulya]
Length = 436
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GI GI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIVGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|77459665|ref|YP_349172.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens Pf0-1]
gi|77383668|gb|ABA75181.1| dihydropyrimidine dehydrogenase (NADP+) / dihydroorotate oxidase B,
catalytic subunit [Pseudomonas fluorescens Pf0-1]
Length = 424
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+ AV
Sbjct: 223 SK--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +VD+ GL +
Sbjct: 281 QVCTAAMLHGFRIVDEMKDGLSRWM 305
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI+ +
Sbjct: 312 SIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAISSLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YG E NIELI++++
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRS 83
>gi|398975539|ref|ZP_10685648.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM25]
gi|398140216|gb|EJM29188.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM25]
Length = 424
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+ AV
Sbjct: 223 SK--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +VD+ GL +
Sbjct: 281 QVCTAAMLHGFRIVDEMKDGLSRWM 305
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S+ + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI+ +
Sbjct: 312 SIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAISSLKQADG 371
Query: 547 THQAHVT-DECTGCTLC 562
THQ V DEC GC LC
Sbjct: 372 THQYEVIDDECVGCNLC 388
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKT 432
++ + E NIELI++++
Sbjct: 60 Y----SAHYGNNREVLGINNIELITDRS 83
>gi|261221504|ref|ZP_05935785.1| dihydropyrimidine dehydrogenase [Brucella ceti B1/94]
gi|265997467|ref|ZP_06110024.1| dihydropyrimidine dehydrogenase [Brucella ceti M490/95/1]
gi|260920088|gb|EEX86741.1| dihydropyrimidine dehydrogenase [Brucella ceti B1/94]
gi|262551935|gb|EEZ07925.1| dihydropyrimidine dehydrogenase [Brucella ceti M490/95/1]
Length = 436
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM ERGMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT++ A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDVRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ I GIGGI + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLSISGIGGITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|430004449|emb|CCF20244.1| Dihydropyrimidine dehydrogenase [Rhizobium sp.]
Length = 438
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ASIM ++ W + E+ D +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 IVASIMVPCEEEAWKAILPLVEETEVDGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA G D VS INT+S ++S+ D P P +
Sbjct: 165 WCKQYTRMPVITKLTPNITDIRYPARAAKAGGTDAVSLINTISSIVSVDLDSFAPVPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ + PI GIGG+ + A +F+ GA V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFLALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + ITGL + K + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMITGLSDWMDAKGHR---------------------TLDDICGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+ N +++ + N + + ++ +
Sbjct: 322 AVSNVTDWRYLNLNYVAKAHIDQ 344
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
++ D+ G+AV VT++ L+ A I+ ++CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDICGRAVSNVTDWRYLNLNYVAKAHIDQELCIKCGRCHIACEDTSHQAITSQVDGIR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + DEC GC LC+++
Sbjct: 374 HFEVMEDECVGCNLCVNV 391
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ ++ N E K++++N
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLYV---------NLREMKEVKKN 99
>gi|330810232|ref|YP_004354694.1| dihydropyrimidine dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697879|ref|ZP_17672369.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q8r1-96]
gi|327378340|gb|AEA69690.1| putative dihydropyrimidine dehydrogenase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388004768|gb|EIK66035.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q8r1-96]
Length = 424
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKRILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P+VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+ AV
Sbjct: 223 SQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE---THQAHV 552
G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI + TH+ V
Sbjct: 318 GRAVGNTTDWKYLDINYQVIAKIDQQACIGCGRCHIACEDTSHQAIASLKQADGTHKYEV 377
Query: 553 TD-ECTGCTLC 562
D EC GC LC
Sbjct: 378 IDEECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKTAFIFFF-LFQAIPNFGEYKKIRENLI--TE 459
S H YG E NIELI++++ I + Q ++ + I ++ E
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVE 113
Query: 460 LNLKKL-------NSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+ K++ +DG+ L +G+P+R + V V + + Q + Y L
Sbjct: 114 ESWKRILPLVEATGADGIELNFGCPHGMPERGMGAAVG---QVPEYVEQVTRWCKTYCSL 170
>gi|148559324|ref|YP_001258321.1| dihydropyrimidine dehydrogenase [Brucella ovis ATCC 25840]
gi|148370581|gb|ABQ60560.1| dihydroorotate dehydrogenase family protein [Brucella ovis ATCC
25840]
Length = 436
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM ++ W + E+ GAD +ELN CPHGM E GMG A GQ PE V +
Sbjct: 105 LIASIMVPCEEEAWKAILPLVEETGADGIELNFGCPHGMSEHGMGAAVGQVPEYVGMVVK 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + ++P KLTPNIT+I A+AA+ D VS INT++ ++S+ D +P P++
Sbjct: 165 WCKQYSRMPVITKLTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIG I + A +FI G V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVAEIARDAETAGLPISGIGDITTWRDAAEFIALGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
Q+C+A F VV + I GL + K Q
Sbjct: 283 QVCTAAMTYGFKVVQEMIDGLSDWMDSKGYQ 313
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
++ D G AV VT++ L+ A IN D+CI CG+C++AC D+ +QAIT +
Sbjct: 314 TLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCGRCHIACEDTSHQAITAMVNGAR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+S G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIHGADRRLL------GLNNIELITDR 84
>gi|294674486|ref|YP_003575102.1| dihydroorotate oxidase [Prevotella ruminicola 23]
gi|294472971|gb|ADE82360.1| dihydroorotate oxidase [Prevotella ruminicola 23]
Length = 398
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 20/212 (9%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIM + +++W+EL+K E+AG DA+ELN SCP M GMG GQDPE+V +
Sbjct: 101 VVIASIMGQF-EEEWIELAKLAEEAGCDAIELNFSCPQ-MRLAGMGSDIGQDPELVNFYT 158
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAV 683
+V+ SVKIP K+TPNIT +T A AY AD +SAINT+ + MS A+ V
Sbjct: 159 SYVKRSVKIPVIPKMTPNITQMTRPAMGAYFAGADAISAINTIKSVTMSKEAE------V 212
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--------NFPILGIGGIDSADVALQFI 735
K+ T G SG A +P+ L+ + ++ M P + GIGGI++ A+ FI
Sbjct: 213 SGKQ--TLSGYSGQAVKPIALRFILEMS-MDPVINGTHGRAIELSGIGGIETWRDAVDFI 269
Query: 736 QAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
Q G VQ+C+AV + ++DD ++GLQT L
Sbjct: 270 QLGCRNVQVCTAVMQYGYRIIDDLVSGLQTYL 301
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D++G+ + ++LD V ++ + CI CG+CY++C D G+QAI F E
Sbjct: 309 LDDLVGEQLPNFVRPSDLDRDTMVYPKVDHERCIGCGRCYISCMDGGHQAIAFE-ERQPR 367
Query: 551 HVTDECTGCTLC 562
+ +C GC LC
Sbjct: 368 IIGTKCVGCHLC 379
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR--- 404
+ + CG+ NPF LAS+ T MV RAFE GW KT Q + VSPR
Sbjct: 5 LGITFCGIDCENPFFLASSAVCTNYDMVARAFEAGWAGVFYKTICKQD--IREVSPRFDA 62
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKK 464
+ KGTT F N+E +SE + F + + + K + +++ + +
Sbjct: 63 VKKGTTF--------AGFRNMEQLSENPYQVDFDILRRLKQNYPTKVVIASIMGQFEEEW 114
Query: 465 LNSDGVSLQNGLPKRQIN--TPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALI 518
+ ++ + G ++N P + + IGQ + V YT + + +I
Sbjct: 115 IELAKLAEEAGCDAIELNFSCPQMRLAGMGSDIGQDPELVNFYTSYVKRSVKIPVI 170
>gi|423094816|ref|ZP_17082612.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q2-87]
gi|397885579|gb|EJL02062.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q2-87]
Length = 424
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKRILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P+VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+ AV
Sbjct: 223 SQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKTAFIFFF-LFQAIPNFGEYKKIRENLI--TE 459
S H YG E NIELI++++ I + Q ++ + I ++ E
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVE 113
Query: 460 LNLKKL-------NSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+ K++ +DG+ L +G+P+R + V V + + Q + Y L
Sbjct: 114 ESWKRILPLVEATGADGIELNFGCPHGMPERGMGAAVG---QVPEYVEQVTRWCKTYCSL 170
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE---THQAHV 552
G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI + T + V
Sbjct: 318 GRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADGTRKYEV 377
Query: 553 TD-ECTGCTLC 562
D EC GC LC
Sbjct: 378 IDEECVGCNLC 388
>gi|378950276|ref|YP_005207764.1| dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas fluorescens
F113]
gi|359760290|gb|AEV62369.1| Dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas fluorescens
F113]
Length = 424
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKRILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ D P+VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+ AV
Sbjct: 223 SQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI + H
Sbjct: 318 GRAVGNTTDWKYLDINYQVIAKIDQQACIGCGRCHIACEDTSHQAIASLKQADGTHKYEV 377
Query: 552 VTDECTGCTLC 562
+ DEC GC LC
Sbjct: 378 IDDECVGCNLC 388
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKTAFIFFF-LFQAIPNFGEYKKIRENLI--TE 459
S H YG E NIELI++++ I + Q ++ + I ++ E
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVE 113
Query: 460 LNLKKL-------NSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
+ K++ +DG+ L +G+P+R + V V + + Q + Y L
Sbjct: 114 ESWKRILPLVEATGADGIELNFGCPHGMPERGMGAAVG---QVPEYVEQVTRWCKTYCSL 170
>gi|89067347|ref|ZP_01154860.1| dihydropyrimidine dehydrogenase [Oceanicola granulosus HTCC2516]
gi|89046916|gb|EAR52970.1| dihydropyrimidine dehydrogenase [Oceanicola granulosus HTCC2516]
Length = 434
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 132/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM + W + + + GAD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 LIASIMVPCEEAAWKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT+I A AA G AD VS INT++ + + D P P +
Sbjct: 165 WCKQYYDRPVIVKLTPNITDIRKPATAAKNGGADAVSLINTINSITGVDLDNFAPMPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + VS IA+ PI GIGGI + A +F+ G V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMSMVSEIARNPETRGLPISGIGGITTWRDAAEFMALGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ + L W + +KG + D GK
Sbjct: 283 QVCTAAMTYGFKIVEEM-----------TRDLSAW--------MDEKGYRSTA--DFVGK 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N +T+ + +
Sbjct: 322 AVPNVTDWQYLNLNYVTKARIDQ 344
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S D +G+AV VT++ L+ A I+ D+CI CG+CY AC D+ +QAI F+P
Sbjct: 314 STADFVGKAVPNVTDWQYLNLNYVTKARIDQDLCIKCGRCYAACEDTSHQAIAFNPGRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 EVIDEECVACNLCVDV 389
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLTTDFVGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEK 431
G +YG ++ NIELI+++
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDR 84
>gi|357027536|ref|ZP_09089609.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium amorphae
CCNWGS0123]
gi|355540516|gb|EHH09719.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium amorphae
CCNWGS0123]
Length = 437
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M +D W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 IVVSLMVPCVEDAWKAILPVVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P KLTPNIT++ A+AA G D VS INT++ + + D P P +
Sbjct: 165 WCKQNTRMPVITKLTPNITDVRKPARAALSGGTDAVSLINTINSITGVDLDSFAPQPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEIARDPETRGLPISGIGGITTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I GL+ + +KG + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMIAGLENWM-------------------DEKGHAS--LDDIVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N + + ++ +
Sbjct: 322 ATPNVTDWQYLNLNYVAKAHIDQ 344
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
S+ D++G+A VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDIVGRATPNVTDWQYLNLNYVAKAHIDQDACIKCGRCHIACEDTSHQAITSMVDGKR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+++
Sbjct: 374 HFEVIEAECVGCNLCVNV 391
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|379720628|ref|YP_005312759.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus 3016]
gi|378569300|gb|AFC29610.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus 3016]
Length = 433
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E+ G D LELN CPHGM ERGMG A GQ P++V ++
Sbjct: 101 IIASLMVEPKREKWHEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQQPDLVEAQTM 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV+ + + P VKLTPNIT+IT A AA G AD VS INT++ L + D N P VG
Sbjct: 161 WVKEAARTPVIVKLTPNITDITATAAAAVRGGADAVSLINTINSLAGVDLDSWNTVPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
+ T+GG G A +P+ L V+ A+ PI GIGGI A++F+ GA VQ
Sbjct: 221 GRG--THGGYCGPAVKPIALNMVAECARNPQVGVPISGIGGISDWRDAVEFMLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+AV + F ++ + + GL L
Sbjct: 279 MCTAVMHHGFRIIHELVEGLNDYL 302
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G++ PNPF LASAPPT V+RAFE GWG AV KT D + N S R
Sbjct: 1 MADLRINLAGIESPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTLG---DPIINTSAR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G NIELI+++
Sbjct: 58 F----AAVHFGGRRVAGLNNIELITDR 80
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV +++G++V+R +++ LD +VVA I+ D CI+C KC++AC D+ +Q I H
Sbjct: 307 IASVSELVGRSVERYSDWGALDLNYKVVARIDTDTCISCNKCHIACEDTSHQCIERHTAA 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ ++C GC LC SI+C
Sbjct: 367 DGSAYLKVREEDCVGCNLC------SIVC 389
>gi|386723224|ref|YP_006189550.1| dihydropyrimidine dehydrogenase subunit B [Paenibacillus
mucilaginosus K02]
gi|384090349|gb|AFH61785.1| dihydropyrimidine dehydrogenase subunit B [Paenibacillus
mucilaginosus K02]
Length = 433
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E+ G D LELN CPHGM ERGMG A GQ P++V ++
Sbjct: 101 IIASLMVEPKREKWHEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQQPDLVEAQTM 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + + P VKLTPNIT+IT A AA G AD VS INT++ L + D N P VG
Sbjct: 161 WVKEAARTPVIVKLTPNITDITATAAAAVRGGADAVSLINTINSLAGVDLDTWNTVPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
+ T+GG G A +P+ L V+ A+ PI GIGGI A++F+ GA VQ
Sbjct: 221 GRG--THGGYCGPAVKPIALNMVAECARNPQVGVPISGIGGISDWRDAVEFMLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+AV + F ++ + + GL L
Sbjct: 279 MCTAVMHHGFRIIHELVEGLNDYL 302
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ + G++ PNPF LASAPPT V+RAFE GWG AV KT D + N S R
Sbjct: 1 MADLSINLAGIESPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTLG---DPIINTSAR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G F NIELI+++
Sbjct: 58 F----AAVHFGGRRVAGFNNIELITDR 80
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
+ SV +++G++V+R +++ LD +VVA I+ D CI+C KC++AC D+ +Q I H
Sbjct: 307 VASVSELVGRSVERYSDWGALDLNYKVVARIDTDTCISCNKCHIACEDTSHQCIERHTAA 366
Query: 548 HQAHV----TDECTGCTLCLSILIASIMC 572
+ ++C GC LC SI+C
Sbjct: 367 DGSAYLKVREEDCVGCNLC------SIVC 389
>gi|319782785|ref|YP_004142261.1| dihydroorotate dehydrogenase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168673|gb|ADV12211.1| dihydroorotate dehydrogenase family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 437
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 IVVSLMVPCVEEAWKAILPVVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P KLTPNIT++ A+AA+ G D VS INT++ + + D P P +
Sbjct: 165 WCKQNTRMPVITKLTPNITDVRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPQPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEIARDPETQGLPISGIGGITTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I GL+ + +KG + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMIAGLENWM-------------------DEKGHAS--LDDIVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N + + ++ +
Sbjct: 322 ATPNVTDWQYLNLNYVAKAHIDQ 344
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S+ D++G+A VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDIVGRATPNVTDWQYLNLNYVAKAHIDQDACIKCGRCHIACEDTSHQAITSMVDGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+++
Sbjct: 374 HFEVIEAECVGCNLCVNV 391
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|398939285|ref|ZP_10668459.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp.
GM41(2012)]
gi|398164410|gb|EJM52548.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp.
GM41(2012)]
Length = 424
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 124/207 (59%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W ++ E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCIEESWKQILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGISSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QA+ +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAVASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVVG-----FNNIELITDRS 83
>gi|337746744|ref|YP_004640906.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus KNP414]
gi|336297933|gb|AEI41036.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus KNP414]
Length = 433
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+M ++ W E+ K+ E+ G D LELN CPHGM ERGMG A GQ P++V ++
Sbjct: 101 IIASLMVEPKREKWHEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQQPDLVEAQTM 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
WV+ + + P VKLTPNIT+IT A AA G AD VS INT++ L + D N P VG
Sbjct: 161 WVKEAARTPVIVKLTPNITDITATAAAAVRGGADAVSLINTINSLAGVDLDTWNTVPHVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743
+ T+GG G A +P+ L V+ A+ PI GIGGI A++F+ GA VQ
Sbjct: 221 GRG--THGGYCGPAVKPIALNMVAECARNPQVGVPISGIGGISDWRDAVEFMLMGATGVQ 278
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+AV + F ++ + + GL L
Sbjct: 279 MCTAVMHHGFRIIHELVEGLNDYL 302
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + + G++ PNPF LASAPPT V+RAFE GWG AV KT D + N S R
Sbjct: 1 MADLRINLAGIESPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTLG---DPIINTSAR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ H G F NIELI+++
Sbjct: 58 F----AAVHFGGRRVAGFNNIELITDR 80
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFH-PE 546
I V +++G++V+R +++ LD +VVA I+ D CI+C KC++AC D+ +Q I H E
Sbjct: 307 IAGVSELVGRSVERYSDWGALDLNYKVVARIDTDTCISCNKCHIACEDTSHQCIERHTAE 366
Query: 547 THQAHV---TDECTGCTLCLSILIASIMC 572
A++ ++C GC LC SI+C
Sbjct: 367 DGSAYLKVREEDCVGCNLC------SIVC 389
>gi|359791299|ref|ZP_09294163.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359252815|gb|EHK56024.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 437
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 6/222 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 IIVSLMVPCVEESWKAILPLVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W +++ ++P KLTPNIT++ A+AA G D VS INT++ + ++ D +P P++
Sbjct: 165 WCKANTRMPVITKLTPNITDVRKPARAALAGGTDAVSLINTINSITAVDLDNFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIALNMVAEIARDPETHGLPISGIGGITTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPP 783
Q+C+A F +V + I GL + K T L G++ P
Sbjct: 283 QVCTAAMTYGFKIVQEMIDGLNNWMDEKGHTDLDAIVGRATP 324
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 494 VIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--THQAH 551
++G+A VT++ L+ A IN D+CI CG+C++AC D+ +QAIT + H
Sbjct: 318 IVGRATPNVTDWQYLNLNYVAKAQINQDLCIKCGRCHIACEDTSHQAITSMVDGIRHFEV 377
Query: 552 VTDECTGCTLCLSI 565
+ EC GC LC+++
Sbjct: 378 IEAECVGCNLCVNV 391
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R + G R L NIELI+++ F+ N E K+++++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDRDLFV---------NLREIKQVKKD 99
>gi|229591377|ref|YP_002873496.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens SBW25]
gi|229363243|emb|CAY50336.1| putative dihydropyrimidine dehydrogenase [Pseudomonas fluorescens
SBW25]
Length = 424
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPRVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPMVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +VD+ GL +
Sbjct: 281 QVCTAAMLHGFRIVDEMKDGLSRWM 305
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S+++ G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 547 THQAHVT-DECTGCTLC 562
THQ V DEC GC LC
Sbjct: 372 THQYEVIDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YG E NIELI++++
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRS 83
>gi|398902416|ref|ZP_10651007.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM50]
gi|398178544|gb|EJM66190.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM50]
Length = 424
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 124/207 (59%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W ++ E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKQILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQAACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVVG-----FNNIELITDRS 83
>gi|398966112|ref|ZP_10681368.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM30]
gi|398146509|gb|EJM35251.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM30]
Length = 424
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G+ AV
Sbjct: 223 SK--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
++ + G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QAI+ +
Sbjct: 312 NIAEFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAISSLKQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYEVIDEECVGCNLC 388
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKT 432
++ + E NIELI++++
Sbjct: 60 Y----SAHYGNNREVLGINNIELITDRS 83
>gi|424922687|ref|ZP_18346048.1| dihydroorotate dehydrogenase [Pseudomonas fluorescens R124]
gi|404303847|gb|EJZ57809.1| dihydroorotate dehydrogenase [Pseudomonas fluorescens R124]
Length = 424
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G+ AV
Sbjct: 223 SK--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ + G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QAI+ +
Sbjct: 312 NIAEFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAISSLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKT 432
++ + E NIELI++++
Sbjct: 60 Y----SAHYGNNREVLGINNIELITDRS 83
>gi|398991513|ref|ZP_10694639.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM24]
gi|399016102|ref|ZP_10718348.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM16]
gi|398106525|gb|EJL96554.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM16]
gi|398139105|gb|EJM28107.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM24]
Length = 424
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G+ AV
Sbjct: 223 SK--STHGGYCGSAVKPIALNMVAEIARDPETQGLPICGIGGIGSWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
++ + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 NIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIGSLKQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYEVIDEECVGCNLC 388
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKT 432
++ + E NIELI++++
Sbjct: 60 Y----SAHYGNNREVLGINNIELITDRS 83
>gi|399001146|ref|ZP_10703864.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM18]
gi|398128339|gb|EJM17730.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM18]
Length = 424
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
SV D G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SVSDFTGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYEVIDEECVGCNLC 388
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVMG-----FNNIELITDRS 83
>gi|398929266|ref|ZP_10663873.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM48]
gi|426409831|ref|YP_007029930.1| dihydropyrimidine dehydrogenase [Pseudomonas sp. UW4]
gi|398167304|gb|EJM55373.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM48]
gi|426268048|gb|AFY20125.1| dihydropyrimidine dehydrogenase [Pseudomonas sp. UW4]
Length = 424
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
AVQ+C+A F +V+D GL +
Sbjct: 279 AVQVCTAAMLHGFRIVEDMKDGLSRWM 305
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QA+ +
Sbjct: 312 SVAEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAVASLKQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYQVIDEECVGCNLC 388
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|398950586|ref|ZP_10673751.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM33]
gi|398157728|gb|EJM46102.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM33]
Length = 424
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
AVQ+C+A F +V+D GL +
Sbjct: 279 AVQVCTAAMLHGFRIVEDMKDGLSRWM 305
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
+++GL R ++T + S+ + G+AV T++ LD QV+A I+ + CI CG+C++
Sbjct: 297 MKDGL-SRWMDT--QGYASIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHI 353
Query: 532 ACNDSGYQAITFHPE---THQAHVTD-ECTGCTLC 562
AC D+ +QA+ + TH+ V D EC GC LC
Sbjct: 354 ACEDTSHQAVASLKQADGTHKYQVIDEECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|398858896|ref|ZP_10614580.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM79]
gi|398237997|gb|EJN23734.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM79]
Length = 424
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|337267956|ref|YP_004612011.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
opportunistum WSM2075]
gi|336028266|gb|AEH87917.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
opportunistum WSM2075]
Length = 437
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W + E+ AD +ELN CPHGM ERGMG A GQ PE + +
Sbjct: 105 IVVSLMVPCVEESWKAILPVVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P KLTPNIT++ A+AA G D VS INT++ + + D P P +
Sbjct: 165 WCKQNTRMPVITKLTPNITDVRKPARAALAGGTDAVSLINTINSITGVDLDSFAPQPIID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ IA+ PI GIGGI + A +F+ GA V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEIARDTETRGLPISGIGGITTWRDAAEFMALGAGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I GL+ + +KG + D G+
Sbjct: 283 QVCTAAMTYGFKIVQEMIAGLENWM-------------------DEKGHAS--LDDIVGR 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N + + + +
Sbjct: 322 ATPNVTDWQYLNLNYVAKARIDQ 344
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
S+ D++G+A VT++ L+ A I+ D CI CG+C++AC D+ +QAIT +
Sbjct: 314 SLDDIVGRATPNVTDWQYLNLNYVAKARIDQDACIKCGRCHIACEDTSHQAITSMVDGVR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + EC GC LC+++
Sbjct: 374 HFEVIEAECVGCNLCVNV 391
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ DI G+K PNPF LASAPPT + V RAF+ GWG V KT + V NV+ P
Sbjct: 1 MADIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|398852176|ref|ZP_10608844.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM80]
gi|398244824|gb|EJN30359.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM80]
Length = 424
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 IIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+K +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G+ AV
Sbjct: 223 SK--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFMALGSGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ + G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SISEFSGRAVGNTTDWKYLDINYQVIAKIDQAACIGCGRCHIACEDTSHQAIGSLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLI---TELN 461
++ + E NIELI++++ I + + I +L+ E +
Sbjct: 60 Y----SAHYGNNREVLGINNIELITDRSLEINLREITQVKKDWPDRAIIVSLMVPCVEES 115
Query: 462 LKKL-------NSDGVSLQ----NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTEL 508
K + +DG+ L +G+P+R + V V + + Q + Y L
Sbjct: 116 WKHILPLVEATGADGIELNFGCPHGMPERGMGAAVG---QVPEYVEQVTRWCKTYCSL 170
>gi|398870173|ref|ZP_10625522.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM74]
gi|398209360|gb|EJM96036.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM74]
Length = 424
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
AVQ+C+A F +V+D GL +
Sbjct: 279 AVQVCTAAMLHGFRIVEDMKDGLSRWM 305
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QA+ +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAVASLKQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYQVIDEECVGCNLC 388
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|254439390|ref|ZP_05052884.1| dihydroorotate dehydrogenase family protein [Octadecabacter
antarcticus 307]
gi|198254836|gb|EDY79150.1| dihydroorotate dehydrogenase family protein [Octadecabacter
antarcticus 307]
Length = 434
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 26/258 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 IIVSIMVPCEEEAWKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKKYYSKPVIVKLTPNITDVRQPAAAARRGGADAVSLINTINSITSVNLDSMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + VS IA+ PI GIGG+ + A +FI G V
Sbjct: 225 GKG--THGGYCGPAVKPIAMSMVSEIARFEETKGMPISGIGGVTTWRDAAEFITLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+AV F +V + I+GL + +KG + Q D G
Sbjct: 283 QVCTAVMTYGFKIVQEMISGLSQWM-------------------DEKGHTSIQ--DFMGA 321
Query: 803 AIPNFGEYKKIRENLITE 820
A+PN +++ + N I +
Sbjct: 322 AVPNTTDWQYLNLNYIAK 339
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ + G+K PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLTTDFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEEGPPVVNVNGP 60
Query: 404 R--IVKGTTSRHLYGPEQGSFLNIELISEK 431
R ++ G R L NIELI+++
Sbjct: 61 RYGVIYGADRRVL------GINNIELITDR 84
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D +G AV T++ L+ A+IN D CI+CG+CY AC D+ +QAI +
Sbjct: 314 SIQDFMGAAVPNTTDWQYLNLNYIAKAVINQDDCISCGRCYAACEDTSHQAIAMSQDRTF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ +EC C LC+ +
Sbjct: 374 TVIDEECVACNLCVDV 389
>gi|388467961|ref|ZP_10142171.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas synxantha BG33R]
gi|388011541|gb|EIK72728.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas synxantha BG33R]
Length = 424
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAASRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQS 781
Q+C+A F +VD+ GL + + T L+ + G++
Sbjct: 281 QVCTAAMLHGFRIVDEMKDGLSRWMDSQGYTSLQDFSGRA 320
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIAKIDQAACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G NIELI++++
Sbjct: 60 YSAHFGANREVLG-----INNIELITDRS 83
>gi|398997951|ref|ZP_10700750.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM21]
gi|398122260|gb|EJM11858.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM21]
Length = 424
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 547 THQAHVT-DECTGCTLC 562
THQ V DEC GC LC
Sbjct: 372 THQYSVIEDECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVVG-----FNNIELITDRS 83
>gi|407362172|ref|ZP_11108704.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas mandelii
JR-1]
Length = 424
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ + G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QA+ +
Sbjct: 312 SIPEFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAVASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
L+G E F NIELI++++
Sbjct: 60 Y------SALFGANREVVGFNNIELITDRS 83
>gi|398839870|ref|ZP_10597112.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM102]
gi|398111833|gb|EJM01709.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM102]
Length = 424
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W + +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N PA
Sbjct: 163 WCKMYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PA 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGSWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQQACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|398881814|ref|ZP_10636788.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM60]
gi|398200027|gb|EJM86955.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM60]
Length = 424
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PI 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTKGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V+D GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEDMKDGLSRWM 305
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QA+ +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAVASLRQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|302834385|ref|XP_002948755.1| hypothetical protein VOLCADRAFT_80405 [Volvox carteri f.
nagariensis]
gi|300265946|gb|EFJ50135.1| hypothetical protein VOLCADRAFT_80405 [Volvox carteri f.
nagariensis]
Length = 396
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM YNK+ W E+ + E+ DA E+N SCPHG+ ER MG+A GQDPE++ +
Sbjct: 124 VLIASIMEEYNKNAWEEIIGRCEEINVDAFEINFSCPHGLPERRMGMAMGQDPEVLGEVC 183
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ ++ P + K+TPN+T+I A A +GV+AINT+S +M ++ D P P+V
Sbjct: 184 GWINAAATKPVWAKMTPNVTDIAYPAAVALAAGCEGVAAINTISCIMGVNLDTLRPEPSV 243
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFP-----ILGIGGIDSADVALQFIQA 737
+ TT GG S A +P+ L ++IAK +F + GIGG+++ A +FI
Sbjct: 244 --EGYTTPGGYSWKAVKPIALAKCTAIAKTIQRDFAGEGKSLSGIGGVETGADAAEFILL 301
Query: 738 GAHAV-QICSAVQNQDFTVVDDYITGLQTLL 767
G+ V Q+C+ V + VV + GLQ +
Sbjct: 302 GSDTVQQVCTGVMIHGYPVVKNLCGGLQRFM 332
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 22/151 (14%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SVE+ G+K PNPF + S PP T ++++AF+ GWG + KT SL V NV+PR
Sbjct: 24 DLSVEVNGMKLPNPFIIGSGPPGTNYQVMKKAFDEGWGGVICKTLSLDSSKVVNVTPRYA 83
Query: 407 K-GTTSRHLYGPEQGSFLNIELISEKTAFIFFF----LFQAIPN-------FGEY-KKIR 453
K S ++G + N ELIS++ + L + PN EY K
Sbjct: 84 KLRDYSSRVFG-----WQNFELISDRPFDVMIAEMKRLREEYPNRVLIASIMEEYNKNAW 138
Query: 454 ENLI---TELNLKKLNSDGVSLQNGLPKRQI 481
E +I E+N+ + S +GLP+R++
Sbjct: 139 EEIIGRCEEINVDAFEIN-FSCPHGLPERRM 168
>gi|389684168|ref|ZP_10175499.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis O6]
gi|388552507|gb|EIM15769.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis O6]
Length = 424
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFVALGCG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
AVQ+C+A F +V++ GL +
Sbjct: 279 AVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S++ G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQQFSGKAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAIASLRQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYEVIDAECVGCNLC 388
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G NIELI++++
Sbjct: 60 YSAHFGANREVLG-----INNIELITDRS 83
>gi|398875750|ref|ZP_10630913.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM67]
gi|398205962|gb|EJM92737.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM67]
Length = 424
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PI 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V+D GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEDMKDGLSRWM 305
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
SV + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QA+ +
Sbjct: 312 SVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAVASLRQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYEVIDEECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|70729914|ref|YP_259653.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas protegens
Pf-5]
gi|68344213|gb|AAY91819.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas protegens Pf-5]
Length = 424
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKAILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVAHPMVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 SQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIARIDQQACIGCGRCHIACEDTSHQAIASLRQADG 371
Query: 550 AHV----TDECTGCTLC 562
+HV DEC GC LC
Sbjct: 372 SHVYEVIDDECVGCNLC 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H +GP E NIELI++++
Sbjct: 60 Y-----SAH-FGPNREVMGINNIELITDRS 83
>gi|395649533|ref|ZP_10437383.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 424
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQMPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTHGLPICGIGGIGNWRDAAEFIALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YG E NIELI++++
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRS 83
>gi|395494992|ref|ZP_10426571.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. PAMC
25886]
Length = 424
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPMVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++ G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G NIELI++++
Sbjct: 60 YSAHFGANREVLG-----INNIELITDRS 83
>gi|395794580|ref|ZP_10473901.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. Ag1]
gi|421137877|ref|ZP_15597953.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens BBc6R8]
gi|395341245|gb|EJF73065.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. Ag1]
gi|404510936|gb|EKA24830.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens BBc6R8]
Length = 424
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPMVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++ G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQEFSGRAVGNTTDWKYLDINYQVIAKIDQAACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G NIELI++++
Sbjct: 60 YSAHFGANREVLG-----INNIELITDRS 83
>gi|300856746|ref|YP_003781730.1| dihydropyrimidine dehydrogenase [Clostridium ljungdahlii DSM 13528]
gi|300436861|gb|ADK16628.1| dihydropyrimidine dehydrogenase [Clostridium ljungdahlii DSM 13528]
Length = 408
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM N+ W +L++ KAGAD +E N SCP M E MG GQ+PE+V
Sbjct: 101 VIVASIM-GENEQQWTKLAELVTKAGADIIECNFSCPQ-MAEESMGSDVGQNPELVEKYC 158
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR +P K+TPNI N+ A+A+ G ADG++AINTV + + D +P+P +
Sbjct: 159 KAVRRGTSLPVLAKMTPNIGNMVIPAEASIHGGADGIAAINTVKSITRVDLDKFSPYPII 218
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G SG A +P+ L+ +S +AK PI GIGGI++ + A++F+ GA
Sbjct: 219 NGK--SAVSGYSGKAIKPIALRFISDLAKSEKLKEIPISGIGGIETWEDAVEFLLLGASN 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QI +AV + ++ D I+GL +
Sbjct: 277 IQITTAVMQYGYRIIKDLISGLSYYM 302
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
VKD++G AV+ V N EL+ + D C+ CG+CY++C D G+QAI ++ E+ +
Sbjct: 310 VKDLVGLAVKNVVNADELERDYIIYPEFRDHNCVGCGRCYISCFDGGHQAIKWNYESRKP 369
Query: 551 H-VTDECTGCTLCLSI 565
+ D+C GC LC +I
Sbjct: 370 QLIEDKCEGCHLCANI 385
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+E CG+K NPF L+S+ + M +A GW V KT + VSPR
Sbjct: 1 MRDLSIEFCGIKCENPFFLSSSVISNNFEMCAKALNMGWAGVVFKTIGFY--VADEVSPR 58
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISE 430
G + G F N+E ISE
Sbjct: 59 FDAIGKENTPFIG-----FKNLEQISE 80
>gi|408481141|ref|ZP_11187360.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. R81]
Length = 424
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKTILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYEVIDDECVGCNLC 388
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YGP E NIELI++++
Sbjct: 60 Y-----SAH-YGPNREVMGINNIELITDRS 83
>gi|398865748|ref|ZP_10621260.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM78]
gi|398242491|gb|EJN28103.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM78]
Length = 424
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PI 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTHGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ + G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QA+ +
Sbjct: 312 SIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAVASLKQADG 371
Query: 550 AH----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 372 THKYQVIEDECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|307102243|gb|EFN50585.1| hypothetical protein CHLNCDRAFT_55724 [Chlorella variabilis]
Length = 349
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 117/196 (59%), Gaps = 9/196 (4%)
Query: 579 WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK 638
W EL ++ ++AG DA E+N SCPHGM ER MG+A GQD E++ + W+ + IP + K
Sbjct: 1 WEELIERCQEAGVDAFEINFSCPHGMPERRMGMAMGQDCELLHEVCGWINAKSTIPVWAK 60
Query: 639 LTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVGTKKLTTYGGVSGN 697
+TPN+T+I+ A+ A +G++AINT++ +M ++ D P P V + TT GG S
Sbjct: 61 MTPNVTDISMPARTALAAGCEGIAAINTITSVMGINLDTLRPEPCV--EGHTTPGGYSSR 118
Query: 698 ATRPMGLKAVSSIAKMF-PNFP-----ILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751
A +P+ L SIA+M +FP + G+GG+++ A +FI G++ VQ+C+ V
Sbjct: 119 AVKPIALAKCMSIAQMMRHDFPHSAASLSGLGGVNTGRDAAEFILLGSNTVQVCTGVMLY 178
Query: 752 DFTVVDDYITGLQTLL 767
+ ++ GLQ +
Sbjct: 179 GYPLIKKLCGGLQAFM 194
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
++VE+ GLK PNPF + S PP T +++++AFE GWG + KT SL V NV+PR K
Sbjct: 282 LAVEVNGLKLPNPFVIGSGPPGTNYAVMKKAFEEGWGAVIAKTVSLDSSKVINVTPRYAK 341
Query: 408 GTTS 411
+S
Sbjct: 342 MKSS 345
>gi|312961803|ref|ZP_07776301.1| dihydroorotate dehydrogenase 1 [Pseudomonas fluorescens WH6]
gi|311284062|gb|EFQ62645.1| dihydroorotate dehydrogenase 1 [Pseudomonas fluorescens WH6]
Length = 424
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 127/220 (57%), Gaps = 6/220 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + + G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVQATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPTVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQS 781
Q+C+A F +V++ GL + + T+L+ + G++
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWMDSQGYTRLQDFSGRA 320
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI +
Sbjct: 313 LQDFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADGT 372
Query: 551 H----VTDECTGCTLC 562
H + DEC GC LC
Sbjct: 373 HAYEVIDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YG E NIELI++++
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRS 83
>gi|399009907|ref|ZP_10712307.1| dihydroorotate dehydrogenase family protein, partial [Pseudomonas
sp. GM17]
gi|398109054|gb|EJL98994.1| dihydroorotate dehydrogenase family protein, partial [Pseudomonas
sp. GM17]
Length = 351
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 30/256 (11%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTHGLPICGIGGIGTWRDAAEFVALGCG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
AVQ+C+A F +V++ GL + D Q + +D
Sbjct: 279 AVQVCTAAMLHGFRIVEEMKDGLSRWM----------DSQG-----------YHSLQDFS 317
Query: 801 GKAIPNFGEYKKIREN 816
G+A+ N ++K + N
Sbjct: 318 GRAVGNTTDWKYLDIN 333
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G NIELI++++
Sbjct: 60 YSAHFGANREVLG-----INNIELITDRS 83
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKC 529
S++D G+AV T++ LD QV+A I+ D CI CG+C
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRC 351
>gi|423692358|ref|ZP_17666878.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens SS101]
gi|388000451|gb|EIK61780.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens SS101]
Length = 424
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M + W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEASWKNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTHGLPICGIGGIGTWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
G+AV T++ LD QV+A I+ + CI CG+C++AC D+ +QAI + H
Sbjct: 318 GRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTSHQAIASLKQADGTHLYEV 377
Query: 552 VTDECTGCTLC 562
+ DEC GC LC
Sbjct: 378 IDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YG E NIELI++++
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRS 83
>gi|425898959|ref|ZP_18875550.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397889307|gb|EJL05789.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 424
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 9/213 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG++ +T+GG G+A +P+ L V+ IA+ PI GIGGI + +F+ G
Sbjct: 221 VGSQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGTWRDVAEFVALGCG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
AVQ+C+A F +V++ GL + + Q
Sbjct: 279 AVQVCTAAMLHGFRIVEEMKDGLSRWMDSQGYQ 311
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S++D G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAIASLKQADG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYQVIDAECVGCNLC 388
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G NIELI++++
Sbjct: 60 YSAHFGANREVLG-----INNIELITDRS 83
>gi|398890313|ref|ZP_10643950.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM55]
gi|398188277|gb|EJM75585.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM55]
Length = 424
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 121/207 (58%), Gaps = 9/207 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD---GNPWPA 682
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S++ + N P
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVAN--PM 220
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAH 740
VG + +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +FI G+
Sbjct: 221 VGGQ--STHGGYCGSAVKPIALNMVAEIARDPQTQGLPISGIGGIGNWRDAAEFIALGSG 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A F +V++ GL +
Sbjct: 279 SVQVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--- 546
S+ + G+AV T++ LD QV+A I+ D CI CG+C++AC D+ +QA+ +
Sbjct: 312 SISEFSGRAVGNTTDWKYLDINYQVIAKIDQDACIGCGRCHIACEDTSHQAVASLKQSDG 371
Query: 547 THQAHVTD-ECTGCTLC 562
TH+ V D EC GC LC
Sbjct: 372 THKYQVIDEECVGCNLC 388
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
+R + G F NIELI++++
Sbjct: 60 YSAHFGANREVLG-----FNNIELITDRS 83
>gi|387894481|ref|YP_006324778.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens A506]
gi|387161565|gb|AFJ56764.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens A506]
Length = 424
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M + W + E G D +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEASWKNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AAY G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T+ +T+GG G+A +P+ L V+ IA+ PI GIGGI + A +F+ G AV
Sbjct: 223 TQ--STHGGYCGSAVKPIALNMVAEIARDPQTNGLPICGIGGIGTWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V++ GL +
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGLSRWM 305
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH---- 551
G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI + H
Sbjct: 318 GRAVGNTTDWKYLDINYQVIAKIDQAACIGCGRCHIACEDTSHQAIASLKQADGTHLYEV 377
Query: 552 VTDECTGCTLC 562
+ DEC GC LC
Sbjct: 378 IDDECVGCNLC 388
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H YG E NIELI++++
Sbjct: 60 Y-----SAH-YGANREVLGINNIELITDRS 83
>gi|328542363|ref|YP_004302472.1| dihydroorotate dehydrogenase [Polymorphum gilvum SL003B-26A1]
gi|326412110|gb|ADZ69173.1| Dihydroorotate dehydrogenase family protein [Polymorphum gilvum
SL003B-26A1]
Length = 434
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M + W + K+ E AD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 102 LVVSLMVPCEEHYWQTILKQVEDTEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTR 161
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W + ++P VKLTPNIT+I A+AA G AD VS INT++ ++S+ D P P +
Sbjct: 162 WCKQHTRMPVIVKLTPNITDIRKPARAARAGGADAVSLINTINSIVSVDLDRMCPSPTID 221
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K +GG G A +P+ L V+ IA+ PI GIGG+ + A +F+ GA V
Sbjct: 222 GKG--AHGGYCGPAVKPIALNMVAEIARDPETAGLPISGIGGVTTWRDAAEFMALGAGNV 279
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V+D I G LK W G + G+
Sbjct: 280 QVCTAAMTYGFKIVEDMIEG-----------LKDW----------MDGAGHSGVSEFVGR 318
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 319 AVPNCSDWQHLNLNYIAKAKIDQ 341
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE-THQ 549
V + +G+AV +++ L+ A I+ D+CI CG+C++AC D+ +QAIT + +
Sbjct: 312 VSEFVGRAVPNCSDWQHLNLNYIAKAKIDQDLCIKCGRCHIACEDTSHQAITSMVDGVRR 371
Query: 550 AHVTD-ECTGCTLCLSI 565
V D EC GC LC+++
Sbjct: 372 FEVIDAECVGCNLCVNV 388
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 50/186 (26%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ E G+K PNPF LASAPPT V RAF+ GWG V KT D + NV+ P
Sbjct: 1 MADLRSEFAGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLG---DPIVNVNGP 57
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN-----L 456
R + G R L G NIELI+++ + N E K+++ + L
Sbjct: 58 RYGAIHG-KDRQLIG-----LNNIELITDRPLEV---------NLQEIKRVKRDWKDRAL 102
Query: 457 ITEL--------------NLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+ L ++ +DGV L G P +S + +G AV +V
Sbjct: 103 VVSLMVPCEEHYWQTILKQVEDTEADGVELNFGCPHG---------MSERG-MGSAVGQV 152
Query: 503 TNYTEL 508
Y E+
Sbjct: 153 PEYIEM 158
>gi|301310152|ref|ZP_07216091.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 20_3]
gi|423336393|ref|ZP_17314140.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|300831726|gb|EFK62357.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 20_3]
gi|409240868|gb|EKN33642.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
Length = 497
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ+PE+VR +
Sbjct: 207 LIISSIM-GRTDDEWTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQNPELVRRFT 264
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 265 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVV 324
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 325 C--GLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 382
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 383 LQICTAVMQYGFRIIDDLCEGLRLFM 408
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG A+ + +L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 415 TLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRF--TSMR 472
Query: 550 AHVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 473 KPVIDEQKCVGCHLC 487
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P M RA E GW KT S + VSPR
Sbjct: 109 DLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYP--IHEVSPRF- 165
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 166 ---DQMEVDGVPFIGFKNMEQLSEAS 188
>gi|298376819|ref|ZP_06986774.1| dihydroorotate dehydrogenase family protein [Bacteroides sp.
3_1_19]
gi|298266697|gb|EFI08355.1| dihydroorotate dehydrogenase family protein [Bacteroides sp.
3_1_19]
Length = 497
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ PE+VR +
Sbjct: 207 LIISSIM-GRTDDEWTRLAQYSMQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFT 264
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 265 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKAFTARPVV 324
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 325 --SGLSSVSGYSGRAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 382
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 383 LQICTAVMQYGFRIIDDLCEGLRLFM 408
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D+IG A+ + L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 416 LSDLIGIALPNIVPPERLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIHF--TSMRK 473
Query: 551 HVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 474 PVIDEQKCVGCHLC 487
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P M RA E GW KT S VSPR
Sbjct: 109 DLAIDFCGVRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH--EVSPRF- 165
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 166 ---DQMEVDGVPFIGFKNMEQLSEAS 188
>gi|189218638|ref|YP_001939279.1| dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum infernorum V4]
gi|189185496|gb|ACD82681.1| Dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum infernorum V4]
Length = 387
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 122/210 (58%), Gaps = 7/210 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M Y++ W EL++K E +GAD +ELN CPHGM ERG G GQDP ++
Sbjct: 50 LIVSMMEEYDRKKWEELAQKIEGSGADGIELNFGCPHGMPERGTGSKIGQDPARCAEVTS 109
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WVR +P VKLTPN+T+I+ IA+AA G A +S INT+ ++ + D P++
Sbjct: 110 WVRRVTSLPLIVKLTPNVTDISCIARAAIAGGASALSLINTLESILGVDIDTFEVLPSIA 169
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAH 740
K +++ G SG A +P+ L + +A M I +GGI S ++F+ GA
Sbjct: 170 GK--SSHSGYSGEAIKPIALNLTAKVASMEEVQKKGLAISAMGGISSWRDGVEFLLLGAT 227
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLK 770
++Q+C++V + F + +D ++GL+ + K
Sbjct: 228 SLQLCTSVMLKGFRIAEDLLSGLKNWMRSK 257
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT------- 542
S+ + G+++ + +++LD + VA IN CI C CY+ C DS YQ I
Sbjct: 261 SIAEFRGKSLSHLVPFSKLDPLFKEVAKINPQKCIRCLLCYVGCRDSAYQCIEVDNKLDL 320
Query: 543 FHPETHQAHVTD-ECTGCTLC 562
F + HV + +C GC+LC
Sbjct: 321 FSNPVNYPHVREADCVGCSLC 341
>gi|114769062|ref|ZP_01446688.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2255]
gi|114549979|gb|EAU52860.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2255]
Length = 434
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 115/205 (56%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM +D W + E+ GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 105 IIVSIMVPCEEDAWKTILPLVEETGADGIELNFGCPHGMAERGMGSAVGQVPEYVEMVTG 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
W + P VKLTPNI++I A AA G AD VS INT+S ++S+ D P P +
Sbjct: 165 WCKKYYSKPVIVKLTPNISDIRKPAAAAQAGGADAVSLINTISSIISVDLDVMAPNPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + V+ IA+ N PI GIGGI S A +++ G V
Sbjct: 225 GKG--THGGYCGPAVKPIAMNMVAEIARNPETANLPISGIGGITSWRDAAEYMVLGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V + I+GL +
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSQWM 307
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 18/114 (15%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ G+K PNPF LASAPPT VRRAFE GWG V KT + + NV+ P
Sbjct: 1 MADLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPIVNVNGP 60
Query: 404 R--IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
R +V G R L NIELI+++ F N E K+++++
Sbjct: 61 RYGVVHGADRRVL------GLNNIELITDRDLF---------KNLDEIKRVKKD 99
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S ++ + QAV VT++ L+ A IN D I+CG+CY AC D+ +QAI+ +
Sbjct: 314 STEEFVRQAVPNVTDWQYLNLNYVSKASINQDDYISCGRCYAACEDTSHQAISMTSDRKF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ + EC C LC+ +
Sbjct: 374 SVIDAECVACNLCVEV 389
>gi|262381679|ref|ZP_06074817.1| oxidoreductase iron-sulfur protein [Bacteroides sp. 2_1_33B]
gi|262296856|gb|EEY84786.1| oxidoreductase iron-sulfur protein [Bacteroides sp. 2_1_33B]
Length = 497
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ PE+VR +
Sbjct: 207 LIISSIM-GRTDDEWTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFT 264
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 265 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVV 324
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 325 C--GLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 382
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 383 LQICTAVMQYGFRIIDDLCEGLRLFM 408
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG A+ + +L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 415 TLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRF--TSMR 472
Query: 550 AHVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 473 KPVIDEQKCVGCHLC 487
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P M RA E GW KT S VSPR
Sbjct: 109 DLAIDFCGVRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH--EVSPRF- 165
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 166 ---DQMEVDGVPFIGFKNMEQLSEAS 188
>gi|150007812|ref|YP_001302555.1| dihydropyrimidine dehydrogenase [Parabacteroides distasonis ATCC
8503]
gi|149936236|gb|ABR42933.1| oxidoreductase iron-sulfur protein [Parabacteroides distasonis ATCC
8503]
Length = 497
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ PE+VR +
Sbjct: 207 LIISSIM-GRTDDEWTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFT 264
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 265 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVV 324
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 325 C--GLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 382
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 383 LQICTAVMQYGFRIIDDLCEGLRLFM 408
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG A+ + +L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 415 TLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRF--TSMR 472
Query: 550 AHVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 473 KPVIDEQKCVGCHLC 487
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P M RA E GW KT S VSPR
Sbjct: 109 DLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH--EVSPRF- 165
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 166 ---DQMEVDGVPFIGFKNMEQLSEAS 188
>gi|410103667|ref|ZP_11298588.1| dihydroorotate dehydrogenase [Parabacteroides sp. D25]
gi|409236396|gb|EKN29203.1| dihydroorotate dehydrogenase [Parabacteroides sp. D25]
Length = 497
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ PE+VR +
Sbjct: 207 LIISSIM-GRTDDEWTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFT 264
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 265 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVV 324
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 325 C--GLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 382
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 383 LQICTAVMQYGFRIIDDLCEGLRLFM 408
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG A+ + +L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 415 TLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRF--TSMR 472
Query: 550 AHVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 473 KPVIDEQKCVGCHLC 487
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P + RA E GW KT S VSPR
Sbjct: 109 DLAIDFCGIRCANPFILASSPVAHNYEICVRALEAGWAGICFKTISFYPSH--EVSPRF- 165
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 166 ---DQMEVDGVPFIGFKNMEQLSEAS 188
>gi|256840078|ref|ZP_05545587.1| oxidoreductase iron-sulfur protein [Parabacteroides sp. D13]
gi|423331693|ref|ZP_17309477.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|256739008|gb|EEU52333.1| oxidoreductase iron-sulfur protein [Parabacteroides sp. D13]
gi|409229534|gb|EKN22406.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
Length = 497
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ PE+VR +
Sbjct: 207 LIISSIM-GRTDDEWTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFT 264
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 265 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVV 324
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 325 C--GLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 382
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 383 LQICTAVMQYGFRIIDDLCEGLRLFM 408
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG A+ + +L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 415 TLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRF--TSMR 472
Query: 550 AHVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 473 KPVIDEQKCVGCHLC 487
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P M RA E GW KT S VSPR
Sbjct: 109 DLAIDFCGVRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH--EVSPRF- 165
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 166 ---DQMEVDGVPFIGFKNMEQLSEAS 188
>gi|255524401|ref|ZP_05391358.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296187521|ref|ZP_06855916.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
gi|255511958|gb|EET88241.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296048043|gb|EFG87482.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
Length = 412
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 7/212 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM + N+++W +L++ + GAD +E N SCP M MG GQ+PE+V+ S
Sbjct: 103 VLVASIMGS-NEEEWTKLAQLVTEIGADIIECNFSCPQ-MTSHAMGSDVGQNPELVKKYS 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR +P K+TPNI N+ A A+ EG A G++AINT+ + + D P V
Sbjct: 161 AAVRRGTHLPVLAKMTPNIGNMEVPAIASIEGGATGIAAINTIKCITGVDLDKKVGLPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ +AK N PI GIGGI++ + AL+FI GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFINQLAKEPKLKNVPISGIGGIETWEDALEFIMLGAAN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
+Q+ +A+ + +V+D I+G+Q + K +
Sbjct: 279 LQVTTAIMQYGYRIVEDMISGIQYYMEEKGVE 310
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT +++K + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNNYEMCAKALETGWGGIVFKTAAMEK--MIEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ G F N+E +SE + L Q N + KK++EN
Sbjct: 62 ---DANKKEGTPFIGFKNMEQVSEHS------LEQ---NLADMKKLKEN 98
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ D++G A+ + LD V + D CI CG+CY++C D +QA+ + E +
Sbjct: 312 LSDLVGAALDNMVPAENLDRDYIVYPKYDTDKCIGCGRCYISCYDGAHQAVVWDEENRKP 371
Query: 551 HVT-DECTGCTLC 562
+ D C GC LC
Sbjct: 372 SINKDNCVGCHLC 384
>gi|255013479|ref|ZP_05285605.1| dihydropyrimidine dehydrogenase [Bacteroides sp. 2_1_7]
Length = 452
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++I+SIM D+W L++ + +AGAD +E N SCP M + GMG GQ PE+VR +
Sbjct: 162 LIISSIM-GRTDDEWTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFT 219
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +T +A AA+EG A G++AINT+ + + P V
Sbjct: 220 AATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVV 279
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
L++ G SG A RP+ L+ + +A PI GIGGI++ AL F+ G
Sbjct: 280 C--GLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTN 337
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QIC+AV F ++DD GL+ +
Sbjct: 338 LQICTAVMQYGFRIIDDLCEGLRLFM 363
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG A+ + +L+ + +++ +C+ CG+C+++CND G+QAI F + +
Sbjct: 370 TLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRF--TSMR 427
Query: 550 AHVTDE--CTGCTLC 562
V DE C GC LC
Sbjct: 428 KPVIDEQKCVGCHLC 442
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D++++ CG++ NPF LAS+P + RA E GW KT S VSPR
Sbjct: 64 DLAIDFCGIRCANPFILASSPVAHNYEICVRALEAGWAGICFKTISFYPSH--EVSPRF- 120
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E +SE +
Sbjct: 121 ---DQMEVDGVPFIGFKNMEQLSEAS 143
>gi|254461883|ref|ZP_05075299.1| dihydroorotate dehydrogenase family protein [Rhodobacterales
bacterium HTCC2083]
gi|206678472|gb|EDZ42959.1| dihydroorotate dehydrogenase family protein [Rhodobacteraceae
bacterium HTCC2083]
Length = 434
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 IIVSLMVPCEEEAWKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + P VKLTPNIT++ A AA G AD VS INT++ + S++ D +P P++
Sbjct: 165 WCKQYYSKPVIVKLTPNITDVRKPAAAARAGGADAVSLINTINSITSVNLDSMSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K T+GG G A +P+ + VS IA+ PI GIGG+ + A +F+ G V
Sbjct: 225 GKG--THGGYCGPAVKPIAMSMVSEIARAEATAGMPISGIGGVTTWRDAAEFMALGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V + I+GL + KG++ + D G
Sbjct: 283 QVCTAAMTYGFKIVQEMISGLSQWM-----DEKGYENTT----------------DFVGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A+PN +++ + N I + + +
Sbjct: 322 AVPNTTDWQYLNLNYIAKAKIDQ 344
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D++ G+ PNPF LASAPPT VRRAFE GWG V KT + V NV+
Sbjct: 1 MADLTTTFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVN-- 58
Query: 405 IVKGTTSRHLYGPEQG--SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
G +YG ++ NIELI+++ FI N E K+++ +
Sbjct: 59 ---GPRYGAIYGADRRLLGLNNIELITDRDLFI---------NLEEIKRVKAD 99
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 493 DVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHV 552
D +G AV T++ L+ A I+ D+CI+CG+C+ AC D+ +QAI + + +
Sbjct: 317 DFVGMAVPNTTDWQYLNLNYIAKAKIDQDLCISCGRCFAACEDTSHQAIAMSEDRVFSVI 376
Query: 553 TDECTGCTLCLSI 565
EC C LC+++
Sbjct: 377 DAECVACNLCVNV 389
>gi|297566516|ref|YP_003685488.1| dihydroorotate dehydrogenase family protein [Meiothermus silvanus
DSM 9946]
gi|296850965|gb|ADH63980.1| dihydroorotate dehydrogenase family protein [Meiothermus silvanus
DSM 9946]
Length = 461
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 7/207 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S M + W ++ K E GAD +ELN CPHGM ERGMG A GQ PE I+
Sbjct: 101 VIVSAMVESTPEAWRDIVLKIEDTGADGIELNYGCPHGMSERGMGSAVGQVPEYCEQITR 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV S KIP VKLTPNITNI+ AKAA G A +S INT++ ++ ++ D P +G
Sbjct: 161 WVTSVAKIPVIVKLTPNITNISYPAKAAVAGGAQAISLINTINSIIGVNLDTLELVPNIG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFPILGIGGIDSADVALQFIQAGAH 740
K A +P+ L +S +A PI G+GGI + A +F+ GA
Sbjct: 221 GKGGHGGYAGP--AVKPIALHLLSQVATTPEVSGSGIPISGMGGISTWRDAAEFLLLGAT 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
++Q+C+AV + + +++D GL +
Sbjct: 279 SLQVCTAVMHYGYRIIEDLCDGLSHWM 305
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ + G++ PNPF LASAPPT + + + +AFE GWG AV KT V NVS R
Sbjct: 1 MADLRINFAGIRSPNPFWLASAPPTNSGAQIHKAFEAGWGGAVWKTIGAP---VLNVSNR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITE----- 459
+ H + + N+ELIS++ + + + + + + + E
Sbjct: 58 Y----GAWHYGSQKMLAINNVELISDRPLEVNLREIRDVKRHWPDRAVIVSAMVESTPEA 113
Query: 460 -----LNLKKLNSDGVSLQNGLPK 478
L ++ +DG+ L G P
Sbjct: 114 WRDIVLKIEDTGADGIELNYGCPH 137
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 24/100 (24%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF------ 543
S+ DV+G+++ R++++ + D + VA I+ D CI C CY+ACND+ +Q I
Sbjct: 312 SISDVVGKSLPRISDFKDFDLSFRAVARIDPDKCIKCNLCYVACNDTAHQCIDLVDANGN 371
Query: 544 --HPETHQAHVT----------------DECTGCTLCLSI 565
P ++ ++C GC LC ++
Sbjct: 372 LVQPYSYDVRSNGRLEAVSTRPQPVVREEDCVGCRLCHNV 411
>gi|440286905|ref|YP_007339670.1| dihydroorotate dehydrogenase family protein [Enterobacteriaceae
bacterium strain FGI 57]
gi|440046427|gb|AGB77485.1| dihydroorotate dehydrogenase family protein [Enterobacteriaceae
bacterium strain FGI 57]
Length = 411
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 9/208 (4%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
++LIASIM N+ W +L+ EKAGAD +E N SCP M MG GQ PE+V
Sbjct: 102 NVLIASIM-GENEQQWQDLAHLVEKAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKY 159
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPA 682
V+ +P K+TPNI ++ D+A AA G ADG++AINTV + ++ + P
Sbjct: 160 CRAVKRGSSLPMLAKMTPNIGDMCDVALAAKHGGADGIAAINTVKSITNIDLNRKIGMPV 219
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGA 739
V K ++ G SG A +P+ L+ + + +M P NFPI GIGGI++ + A +F+ GA
Sbjct: 220 VNGK--SSISGYSGKAVKPIALRFIQQM-RMHPELRNFPISGIGGIETWEDAAEFLLLGA 276
Query: 740 HAVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +++D I+GL L
Sbjct: 277 ATLQVTTGIMQYGYRIMEDMISGLSHYL 304
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ +++G A + ELD V I +D C+ CG+CY++C D G+QA+ ++ ET
Sbjct: 311 SIDEMLGLANTNIVPAEELDRSYIVYPHIAEDKCVGCGRCYISCYDGGHQAMEWNEETRT 370
Query: 550 AHV-TDECTGCTLC 562
H TD+C GC LC
Sbjct: 371 PHCNTDKCVGCLLC 384
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAEH 83
>gi|451820939|ref|YP_007457140.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451786918|gb|AGF57886.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 500
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 124/213 (58%), Gaps = 7/213 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIM N+++W +L+K +AGAD +E N SCPH GE G+G GQ+PE+V +
Sbjct: 201 IIVASIM-GQNEEEWTKLAKLMTEAGADIIECNFSCPHMTGE-GLGSDVGQNPELVDLYT 258
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
R +P K+TPNI N+ AKAA E A G++AINT+ +M++ + N A
Sbjct: 259 KATRKGTHLPILAKMTPNIGNMEIPAKAAMEAGATGIAAINTIKSIMNIDLE-NFQSAPN 317
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSS--IAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++ GG SG A +P+ L+ + + K + PI G+GGI++ A +F+ G +
Sbjct: 318 VEGKSSVGGYSGKAVKPIALRFIRDMKVCKELKDAPISGMGGIETWADAAEFLALGCENL 377
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
QI ++V + +++D I G++ LYL S K
Sbjct: 378 QITTSVMQYGYRIIEDLIEGMK--LYLSSQGYK 408
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
V +V+G+A+ + EL+ + D C+ CG+CY++C D G+QAI +T++
Sbjct: 410 VSEVVGKALPNIVAADELERDGICYPKFDRDKCLGCGRCYLSCFDGGHQAIKMDEKTNKP 469
Query: 551 H-VTDECTGCTLCLSI 565
+ ++C GC LC ++
Sbjct: 470 MLIANKCVGCQLCGTV 485
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 344 DLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSP 403
D VD+S++ CG+ NPF L+S+ + MV +AF+ GW KT + + VSP
Sbjct: 100 DDVDLSIDFCGVHTENPFFLSSSVVGSNYEMVAKAFDMGWAGVAFKTIGMF--VPKEVSP 157
Query: 404 RIVKGTTSRHLYGPEQGSFLNIELISEKT 432
R T +L P G F NIE IS+ T
Sbjct: 158 RFT-ALTKENL--PFVG-FKNIEQISDHT 182
>gi|255528042|ref|ZP_05394877.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296188156|ref|ZP_06856548.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
gi|255508256|gb|EET84661.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296047282|gb|EFG86724.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
Length = 412
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+++W +L+K + GAD +E N SCP M MG GQ+P +V+ S
Sbjct: 103 VLIASIM-GENEEEWTKLAKSVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPALVKKYS 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR +P K+TPNI N+ A A EG A G+SAINT+ + + D P V
Sbjct: 161 AAVRKGTHLPIIAKMTPNIGNMEMPAIGAIEGGATGISAINTIKCITGMDLDKLVGLPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ +AK N PI GIGGI++ + AL+FI GA
Sbjct: 221 NGK--SSISGYSGKAIKPIALRFIAQLAKEPKLKNVPISGIGGIENWEDALEFILLGASN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+ +A+ + +V+D I+GL +
Sbjct: 279 VQVTTAIMQYGYRIVEDMISGLSYYM 304
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ ++G A+ + + ELD V D CI CG+CY++C D G+QA+ + E +
Sbjct: 312 LHQLVGAALNNIVSAEELDRDYIVYPNYEQDKCIGCGRCYISCYDGGHQAVVWDEEKRRP 371
Query: 551 HVT-DECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNL 598
+ D C GC LC S++C + + + T K GA++ E++L
Sbjct: 372 SLNKDNCVGCHLC------SMVCPI--EGCITKGELTFKNGAESREISL 412
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ CG+K NPF L+S+P M +A E GWG V KT + + VSPR
Sbjct: 5 DLSIDFCGVKCENPFFLSSSPVGNNYDMCAKALETGWGGIVFKTVGIF--IANEVSPRFS 62
Query: 407 KGTTSRHLYGPEQGSFLNIELISE 430
T P G F N+E+I+E
Sbjct: 63 ALTKEST---PFVG-FKNMEMIAE 82
>gi|317132141|ref|YP_004091455.1| dihydroorotate dehydrogenase family protein [Ethanoligenens
harbinense YUAN-3]
gi|315470120|gb|ADU26724.1| dihydroorotate dehydrogenase family protein [Ethanoligenens
harbinense YUAN-3]
Length = 401
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM +++W +L++ E+ G D LE N SCP M + MG GQ E+V
Sbjct: 102 VLVASIM-GETEEEWTKLARLAEQVGVDMLECNFSCPQ-MTKSTMGSDVGQSKELVETYC 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR K+P K+TPNI N+ +A AA G ADG++AINT+ + L + + +P V
Sbjct: 160 RAVRKGTKLPVLAKMTPNIGNMEPVAIAAMRGGADGIAAINTIKSITRLDVEHFSAYPDV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
+ ++ G SG A RP+ L+ + +AK N PI GIGGI++ AL+F GA
Sbjct: 220 DGQ--SSVSGYSGEAVRPIALRFIHDLAKHPQLQNVPISGIGGIETWRDALEFFLLGARN 277
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWD 778
VQ+ +AV + +VDD GL Y+++ ++ D
Sbjct: 278 VQVTTAVMEYGYRIVDDMRDGLAA--YMENKGIRHLD 312
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I + +++G+A+ + + L +V+ +I+ D C+ CG+C+++C D +QAI++ T
Sbjct: 308 IRHLDELVGRALPHLVPSSALRRDYRVLPVIDRDACVGCGRCFISCRDGAHQAISWEKTT 367
Query: 548 HQAHV-TDECTGCTLC 562
+ V T++C GC LC
Sbjct: 368 RRPDVLTEKCVGCHLC 383
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+ NPF L+S+ M RA E GWG V KT + VSPR
Sbjct: 4 DLSITFCGVPCENPFFLSSSCVAGNYEMCARALEAGWGGIVFKTIGFYQ--ANEVSPRF- 60
Query: 407 KGTTSRHLYGPEQGSFLNIELIS----EKTAFIFFFLFQAIPN 445
T H G G F N+E IS E+ + L QA P
Sbjct: 61 --DTLSH-GGVAFGGFRNLEQISDHPLEENMDVLRRLKQAYPQ 100
>gi|261403127|ref|YP_003247351.1| dihydroorotate dehydrogenase 1B [Methanocaldococcus vulcanius M7]
gi|261370120|gb|ACX72869.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus
vulcanius M7]
Length = 302
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 13/188 (6%)
Query: 570 IMCTYNKDD--WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV 627
I Y KD+ +++++KK E DA+ELN+SCPH +G G GQ+PEM N+ V
Sbjct: 98 IGSIYGKDEKEFMDVAKKIESF-VDAIELNISCPHA---KGYGATIGQNPEMSYNVCAAV 153
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ VKIP F KLTPN+++I +IA A E DG+ AINTV G++ P +
Sbjct: 154 KDVVKIPVFAKLTPNVSDIVEIAGAVVEAGVDGLVAINTVRGMVIDIKAKKPILS----- 208
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+GG+SG A +P+G+KAV + + F + PI+G+GGI S + A++++ AGA AVQ+ S
Sbjct: 209 -NKFGGLSGKAIKPVGIKAVWDLYENF-DVPIIGVGGIMSGEDAIEYMMAGASAVQVGSG 266
Query: 748 VQNQDFTV 755
V + + V
Sbjct: 267 VYYRGYNV 274
>gi|147921507|ref|YP_684678.1| dihydroorotate dehydrogenase 1B [Methanocella arvoryzae MRE50]
gi|121690641|sp|Q0W8E1.1|PYRDB_UNCMA RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|110620074|emb|CAJ35352.1| dihydroorotate dehydrogenase [Methanocella arvoryzae MRE50]
Length = 301
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 13/186 (6%)
Query: 590 GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDI 649
GADA ELN+SCPH +G G+ CG DPE+VR+I+ V+++VK+P +VKLTPN+T+I I
Sbjct: 115 GADAYELNVSCPH---AKGYGMQCGTDPELVRSITKAVKAAVKVPVWVKLTPNVTDIRPI 171
Query: 650 AKAAYEGKADGVSAINTVSGLMSLSADGNP-WPAVGTKKLTTYGGVSGNATRPMGLKAVS 708
AA EG AD V AINT L +++ D N WP +G + GG+SG A +P+ +K V
Sbjct: 172 GLAAQEGGADAVVAINT---LKAMAIDINTGWPILGNRS----GGLSGPAVKPVAIKCVY 224
Query: 709 SIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLY 768
+ ++ + P++G+GG+ + A++F+ AGA AV+I SAV +D G+ L
Sbjct: 225 DLYEVL-DIPVIGVGGVSNWADAIEFMMAGACAVEIGSAVY-EDIGTFASVSMGISNYLD 282
Query: 769 LKSTQL 774
K+ +L
Sbjct: 283 RKNMKL 288
>gi|390357218|ref|XP_786042.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 166
Score = 134 bits (338), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/125 (50%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 443 IPNFGEYKKIRENLIT--ELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+P+FG Y++ R ++ + NL D Q P+R P + I +++DVIGQA+
Sbjct: 16 LPSFGAYQEERIKVVAAHKRNLDLTGDD----QQPAPQRPAREPKKPIPTIRDVIGQALD 71
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
R+ +Y +LDN +QVVALI+++MCINCGKCYM CNDSGYQ+ITF P+TH VT +CTGCT
Sbjct: 72 RIGSYGQLDNTEQVVALIDEEMCINCGKCYMTCNDSGYQSITFDPKTHLPRVTKDCTGCT 131
Query: 561 LCLSI 565
LC S+
Sbjct: 132 LCASV 136
>gi|431896402|gb|ELK05814.1| Dihydropyrimidine dehydrogenase [NADP+] [Pteropus alecto]
Length = 187
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 89/125 (71%), Gaps = 7/125 (5%)
Query: 443 IPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+P+FG Y + R+ +I E + LK+ N+ + L KR TP + I ++KDVIG+A+Q
Sbjct: 38 LPSFGPYLEQRKKIIAENKIKLKEENAAFLPL-----KRNYFTPKKPIPTMKDVIGKALQ 92
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 93 YLGAFGELSNTEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDACTGCT 152
Query: 561 LCLSI 565
LCLS+
Sbjct: 153 LCLSV 157
>gi|120609661|ref|YP_969339.1| dihydropyrimidine dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120588125|gb|ABM31565.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Acidovorax citrulli AAC00-1]
Length = 442
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 128/259 (49%), Gaps = 32/259 (12%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 MIVSIMVPCVEESWKRILPMVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTQ 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
W + +P VKLTPNIT++ A+AA G AD VS INT++ +M + D P G
Sbjct: 164 WCKHYTHLPVIVKLTPNITDVRQPARAARAGGADAVSLINTINSIMGVDLDRMAMSPNTG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGG+ + A +FI G V
Sbjct: 224 GQG--SHGGYCGPAVKPIALNMVAEIARDEQTAGLPISGIGGVSTWRDAAEFIALGCGTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFR---DK 799
Q+C+A F +V D GL + A+ +R D
Sbjct: 282 QVCTAAMVYGFKIVQDMCGGLSNFM------------------------DAHGYRTIEDF 317
Query: 800 EGKAIPNFGEYKKIRENLI 818
G A+P ++K++ N I
Sbjct: 318 RGGAVPTVKDWKQLDLNHI 336
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE--T 547
+++D G AV V ++ +LD A+IN D CI CG+C++ C D+ +QAITF E
Sbjct: 313 TIEDFRGGAVPTVKDWKQLDLNHIDKAVINQDACIQCGRCHVVCEDTSHQAITFTREGGV 372
Query: 548 HQAHVTD-ECTGCTLCLSI 565
+ V + EC GC LC+SI
Sbjct: 373 RRFEVDESECVGCNLCVSI 391
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI + G++ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSDFLGIRSPNPFWLASAPPTDKEVNVTRAFEAGWGGVVWKTLGEDPHVVNVNGPR 60
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
+ R + G NIELI+++
Sbjct: 61 YSTLMSQDRRVIG-----LNNIELITDR 83
>gi|270004692|gb|EFA01140.1| hypothetical protein TcasGA2_TC010365 [Tribolium castaneum]
Length = 197
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 8/152 (5%)
Query: 417 PEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKK---LNSDGVSLQ 473
P+ G++ ++ + A I LFQA+P+ G Y K RE + N+K+ L+ +G +
Sbjct: 19 PKIGAYKKLDNTKQVVALIDDVLFQALPHIGPYLKEREEKMK--NVKREIILHHNG--RE 74
Query: 474 NGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMAC 533
NG P + P + + +++G+A+ ++ Y +LD+ KQVVALI+ DMCINCGKCYM C
Sbjct: 75 NGYPINGVQVPSKE-PKINEIVGRALPKIGAYEKLDDTKQVVALIDGDMCINCGKCYMTC 133
Query: 534 NDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
NDSGYQAI F P+TH V D+CTGCTLCLS+
Sbjct: 134 NDSGYQAINFDPKTHIPTVNDDCTGCTLCLSV 165
>gi|121611067|ref|YP_998874.1| dihydropyrimidine dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121555707|gb|ABM59856.1| dihydroorotate dehydrogenase family protein [Verminephrobacter
eiseniae EF01-2]
Length = 436
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 26/256 (10%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M + W + + E GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 104 LIVSLMVACEELRWKNILAQVEDTGADGVELNFGCPHGMSERGMGAAVGQVPEYITLVTA 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
W + ++P VKLTPNIT++ A+AA G AD VS INT++ +M + + P+
Sbjct: 164 WCKHYSRLPVIVKLTPNITDVRQAARAARAGGADAVSLINTINSVMGVDLERMQMIPS-- 221
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN--FPILGIGGIDSADVALQFIQAGAHAV 742
T ++GG G A P+ L V+ IA+ P P+ GIGGI + A QFI G V
Sbjct: 222 TDGWGSHGGYCGPAVLPIALHMVAEIARDAPTAGLPLSGIGGIGTWRDAAQFIALGCSTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V D GL + + G Q D +G+
Sbjct: 282 QVCTAAMVYGFKIVQDMCDGLSNFM-------------------DRHGYRTTQ--DFKGQ 320
Query: 803 AIPNFGEYKKIRENLI 818
A+P+ ++K++ N I
Sbjct: 321 ALPSVKDWKQLNLNHI 336
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 16/145 (11%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADLRSRFLGIASPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPAVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLIT---EL 460
+ R + G NIELI+++ + + + + +L+ EL
Sbjct: 61 YATLMSQDRRVIG-----LNNIELITDRPLHTNLAEIRRVKRRWPGRALIVSLMVACEEL 115
Query: 461 NLKKL-------NSDGVSLQNGLPK 478
K + +DGV L G P
Sbjct: 116 RWKNILAQVEDTGADGVELNFGCPH 140
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
+ +D GQA+ V ++ +L+ A+I+ CI CG+C+ C DS +QAIT + +
Sbjct: 313 TTQDFKGQALPSVKDWKQLNLNHIEKAVIDQAACIRCGRCHAVCEDSAHQAITAMVDGVR 372
Query: 550 AHVT--DECTGCTLCLSI 565
+EC GC LC SI
Sbjct: 373 RFQVKEEECVGCNLCASI 390
>gi|304394558|ref|ZP_07376477.1| dihydropyrimidine dehydrogenase [NADP+] [Ahrensia sp. R2A130]
gi|303293219|gb|EFL87600.1| dihydropyrimidine dehydrogenase [NADP+] [Ahrensia sp. R2A130]
Length = 437
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 140/263 (53%), Gaps = 26/263 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M ++ W ++ + + GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 105 MVVSLMVPCEEEPWKQIIHRVAETGADGVELNFGCPHGMSERGMGAAVGQVPEYIQMVTE 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W ++ ++P VKLTPN+T++ A+AA G AD VS INT++ ++S+ D P P +
Sbjct: 165 WCKTYGELPVIVKLTPNVTDVRYPARAAKAGGADAVSLINTINSIVSIDLDKMAPEPTID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ L V+ IA+ PI GIGGI + A ++I G V
Sbjct: 225 GKG--SHGGYCGPAVKPIALHMVADIARDQETAGIPISGIGGITTWRDAAEYIALGCGNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
Q+C+A F +V++ I+GL+ + D Q T D G
Sbjct: 283 QVCTAAMTYGFKIVEEMISGLEAWM----------DEQGHAT-----------IEDFRGM 321
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
A PN +++ + N +T+ + +
Sbjct: 322 AAPNVTDWQYLNLNYVTKAQIDQ 344
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAIT--FHPET 547
+++D G A VT++ L+ A I+ D CI+CG+C++AC D+ +QAIT +
Sbjct: 314 TIEDFRGMAAPNVTDWQYLNLNYVTKAQIDQDKCISCGRCHIACEDTSHQAITNIVDGKR 373
Query: 548 HQAHVTDECTGCTLCLSI 565
H + +EC GC LC+++
Sbjct: 374 HFEVIDEECVGCNLCVNV 391
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D++ G+K PNPF LASAPPT + V RAFE GWG V KT V NV+ P
Sbjct: 1 MADLTSNFVGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGEAGPPVVNVNGP 60
Query: 404 RI--VKGTTSRHLYGPEQGSFLNIELISEK 431
R + G R L NIELI+++
Sbjct: 61 RYGAIWGADRRLL------GLNNIELITDR 84
>gi|296109015|ref|YP_003615964.1| dihydroorotate dehydrogenase family protein [methanocaldococcus
infernus ME]
gi|295433829|gb|ADG13000.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus
infernus ME]
Length = 302
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 17/204 (8%)
Query: 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
++D++ E++KK E D +ELN+SCPH +G G GQDPE+ + V+ VK+P
Sbjct: 105 DEDEFREVAKKIEDY-VDIIELNISCPHA---KGYGATIGQDPELSYKVCKAVKEEVKVP 160
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGG 693
F KLTPN++NI +IA+A + K DG AINTV G+ + + A P + K +GG
Sbjct: 161 VFAKLTPNVSNILEIAEALVDAKVDGFVAINTVRGMKIDIKAK---RPILSNK----FGG 213
Query: 694 VSGNATRPMGLKAVSSIAKMFPNF--PILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751
+SG A +P+G+K V ++ NF PI+G+GGI + + A++++ AGA AVQ+ SAV +
Sbjct: 214 LSGKAIKPIGVKIVYD---LYENFDKPIIGVGGIFTGEDAIEYMMAGASAVQVGSAVYFR 270
Query: 752 DFTVVDDYITGLQTLLYLKSTQLK 775
+ V ++ L ++ +LK
Sbjct: 271 GYDVFKKICDEIKEFLIEENLKLK 294
>gi|409349147|ref|ZP_11232692.1| Dihydroorotate oxidase (fumarate) [Lactobacillus equicursoris CIP
110162]
gi|407878419|emb|CCK84750.1| Dihydroorotate oxidase (fumarate) [Lactobacillus equicursoris CIP
110162]
Length = 309
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 26/249 (10%)
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
++ T + N K +AL+ D + G C + I P + H
Sbjct: 46 IKTATRHARTGNPKPQIALLEDGVMNAVGLTNPGCEVVASEKI---PALRKKHP------ 96
Query: 559 CTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPE 618
+ I + + + D+LE+++ A DALELNLSCP+ + E GM G PE
Sbjct: 97 -----DLPIMASVGGESVQDYLEVAEILASAKPDALELNLSCPN-VSEGGM--TFGIVPE 148
Query: 619 MVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADG 677
MV I+ V+ V IP +VKLTPN+T+IT+IAKAA G ADG++ INT+ GL + L
Sbjct: 149 MVEEITKKVKERVDIPVYVKLTPNVTDITEIAKAAERGGADGLTLINTLLGLHLDLKTR- 207
Query: 678 NPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQA 737
P +G +GG+SG A +P+ ++ V+ + K N PI+G+GGI+SA+ A +FI A
Sbjct: 208 --RPVLGND----FGGLSGQAVKPVAVRMVAQVKKAV-NLPIIGVGGINSAEDAAEFILA 260
Query: 738 GAHAVQICS 746
GA AVQI S
Sbjct: 261 GASAVQIGS 269
>gi|28210533|ref|NP_781477.1| dihydropyrimidine dehydrogenase [Clostridium tetani E88]
gi|28202970|gb|AAO35414.1| oxidoreductase iron-sulfur protein [Clostridium tetani E88]
Length = 411
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ +W EL+K +AGAD +E N SCP M MG GQ PE+V+ S
Sbjct: 103 VLIASIM-GENEKEWTELAKMVTEAGADIIECNYSCPQ-MASGAMGSDVGQSPELVKKYS 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
R K+P K+TPNI ++ A A+ EG A G++AINT+ + ++ D P V
Sbjct: 161 RATRKGSKLPILAKMTPNIGHMEIPAIASIEGGATGIAAINTIKCITGINLDNQISLPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ +++ PI GIGGI++ + AL+FI GA
Sbjct: 221 NGK--SSISGYSGKAIKPIALRFIAQMSQNEKLKGVPISGIGGIETWEDALEFIMLGARN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+ +A+ + +V D I G+ +
Sbjct: 279 VQVTTAIMQYGYRIVKDMIKGVSYYM 304
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++++++G A+ + ELD V +++ CI CG+CY++C D G+QAI ++ E
Sbjct: 311 NLEELVGIALNNLIPAEELDRGYIVYPNFHEEKCIGCGRCYISCYDGGHQAIEWNTEERT 370
Query: 550 AHVTDE-CTGCTLCLSILIASIMCT-YNKDDWLELSKKTE 587
+ E C GC LC + + + C Y + ++ E +K+ E
Sbjct: 371 VKLNKEKCVGCHLCSN--VCPVQCIDYGEIEFKEGNKERE 408
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
VD+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 4 VDLSIEFCGVKCENPFFLSSSPVGHNYEMCAKALETGWGGVVFKTIGFY--LPEEVSPRF 61
Query: 406 --VKGTTSRHLYGPEQGSFLNIELISE 430
++ ++ L F N+E I+E
Sbjct: 62 DNLRKESTSFL------GFKNMEQIAE 82
>gi|358068375|ref|ZP_09154839.1| hypothetical protein HMPREF9333_01720 [Johnsonella ignava ATCC
51276]
gi|356693423|gb|EHI55100.1| hypothetical protein HMPREF9333_01720 [Johnsonella ignava ATCC
51276]
Length = 362
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 126/214 (58%), Gaps = 9/214 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM + N D+W L+K+ +KAG+D +E N SCP M MG GQ PE+V++
Sbjct: 104 VIVASIMGS-NDDEWAVLAKEAQKAGSDMIECNFSCPQ-MTSSTMGSDVGQSPELVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V ++ +P K+TPNI N+ A+AA EG A G++AINTV + ++ D N P V
Sbjct: 162 EVVSANTTLPVIAKMTPNIGNMEIPARAAIEGGAKGIAAINTVKSITNIDLDLNIGMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ +S + + + P+ GIGGI++ ++F+ GA
Sbjct: 222 NGK--SSVSGYSGAAVKPIALRFISDLKHDPLLKSIPLTGIGGIETWRDCVEFLLLGASN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
+Q+ +A+ + +V+D I+GL Y++ +K
Sbjct: 280 IQVTTAIMQYGYRIVEDMISGLS--FYMEDYGIK 311
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+ NPF L+S+P + M +A E GWG KT S+ + SPR
Sbjct: 6 DLSIDFLGVHCENPFFLSSSPVGSNYEMCAKALECGWGGIFYKTISVF--IPNECSPRFD 63
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENL 456
+ P G F N+E+ S+K + NFG K+++++
Sbjct: 64 IASKENT---PWTG-FKNMEMTSDKPNEV---------NFGYIKRLKKDF 100
>gi|150016815|ref|YP_001309069.1| dihydropyrimidine dehydrogenase [Clostridium beijerinckii NCIMB
8052]
gi|149903280|gb|ABR34113.1| dihydroorotate dehydrogenase family protein [Clostridium
beijerinckii NCIMB 8052]
Length = 517
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 9/214 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIM N+++W +L+K +AGAD +E N SCPH M +G+G GQ+P++V +
Sbjct: 219 IIVASIM-GQNEEEWTKLAKLMTEAGADIIECNFSCPH-MTSKGVGSDVGQNPDLVALYT 276
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI N+ A AA E A G++AINT+ +M+L+ + P V
Sbjct: 277 KATRKGTNLPILAKMTPNIGNVEIPAMAAMEAGATGIAAINTIKSIMNLNLENFESEPNV 336
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+ GG SG A +P+ L+ + + + + PI G+GGI++ A +F+ G
Sbjct: 337 EGK--TSVGGYSGKAVKPIALRFIHDMKACEELKDAPISGMGGIETWKDAAEFMALGCEN 394
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
+QI ++V + ++DD I G++ LYL S K
Sbjct: 395 LQITTSVMQYGYRIIDDLINGMK--LYLSSQGYK 426
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ +++G A+ + +LD + CI CG+CY++C D G+QAI T
Sbjct: 427 NISEIVGSALPNIVPTDKLDRDSICYPRFDRQKCIGCGRCYLSCYDGGHQAIKVDINTRM 486
Query: 550 A-HVTDECTGCTLCLSILIA 568
+ D+C GC LC ++ A
Sbjct: 487 PILLVDKCVGCQLCSTVCPA 506
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
VD+ ++ CG+K NPF L+S+ + MV +AFE GW KT + + VSPR
Sbjct: 120 VDLEIDFCGVKCENPFFLSSSVVGSNYEMVAKAFEMGWAGVAFKTIGMF--VPKEVSPRF 177
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEKT 432
T P G F NIE IS+ T
Sbjct: 178 ---TALSKESVPFVG-FKNIEQISDHT 200
>gi|256810615|ref|YP_003127984.1| dihydroorotate dehydrogenase 1B [Methanocaldococcus fervens AG86]
gi|256793815|gb|ACV24484.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus
fervens AG86]
Length = 302
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 117/181 (64%), Gaps = 11/181 (6%)
Query: 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
N++++ E++K+ EK D +ELN+SCPH +G G GQ+PE+ ++ V+ SVK+P
Sbjct: 105 NEEEFAEVAKRMEKY-VDIIELNISCPHA---KGYGATIGQNPELSYSVCKAVKKSVKVP 160
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
F KLTPN+T+I +IA+A + DG+ AINTV G M++ P +G K +GG+
Sbjct: 161 VFAKLTPNVTDIIEIAQAVVDAGVDGLVAINTVRG-MAIDIKAKK-PILGNK----FGGL 214
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT 754
SG A +P+G+K V + + F + PI+G+GGI + + A++++ AGA AVQI S V + +
Sbjct: 215 SGKAIKPIGIKVVWDLYENF-DVPIIGVGGIMNGEDAIEYMMAGASAVQIGSGVYYRGYD 273
Query: 755 V 755
+
Sbjct: 274 I 274
>gi|297623162|ref|YP_003704596.1| dihydroorotate dehydrogenase family protein [Truepera radiovictrix
DSM 17093]
gi|297164342|gb|ADI14053.1| dihydroorotate dehydrogenase family protein [Truepera radiovictrix
DSM 17093]
Length = 451
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 127/253 (50%), Gaps = 28/253 (11%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S M + W + ++ E GADA+ELN CPHGM ERGMG A GQ PE I+
Sbjct: 101 VIVSAMFESDPQVWADAVRRIEDTGADAIELNYGCPHGMSERGMGSAVGQVPEYCSMITE 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
WV S +P VKLTPNIT+I A+AA EG+A +S INT++ ++ + D P VG
Sbjct: 161 WVTSVASVPVIVKLTPNITDIKAPARAAIEGRAAALSLINTINSVIGVDLDAFTLKPNVG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAH 740
K +G A +P+ L +S + ++ PI G+GGI + A +F+ GA
Sbjct: 221 GKGGHGG--YAGPAVKPIALSMLSEVMQLPETRDFRIPISGMGGIQTWRDAAEFLLLGAT 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
++Q+C+AV + F ++++ GL L K A RD
Sbjct: 279 SLQVCTAVMHYGFRIIEELTDGLSNWL---------------------DDKGAASVRDVI 317
Query: 801 GKAIPNFGEYKKI 813
G A P + + ++
Sbjct: 318 GAAAPRYSPFNQL 330
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S + CG+K PNPF LASAPPT + V +AF+ GWG AV KT V NVS R
Sbjct: 1 MADLSTDFCGVKSPNPFWLASAPPTNTAYQVCKAFDYGWGGAVWKTIGTP---VLNVSSR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
G + + NIELIS++
Sbjct: 58 Y----GGWEYGGNKLAAINNIELISDR 80
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF------ 543
SV+DVIG A R + + +LD +VVA I+ CI+C C++AC++ +Q I
Sbjct: 312 SVRDVIGAAAPRYSPFNQLDLSYKVVARIDPAKCIHCNLCFVACDEGAHQCIDLTVDGVK 371
Query: 544 -HPETHQAHV-------TDECTGCTLC 562
P T+ D+C GC LC
Sbjct: 372 IDPATYAGPAKTQPVVREDDCVGCNLC 398
>gi|410724454|ref|ZP_11363645.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
Maddingley MBC34-26]
gi|410602154|gb|EKQ56642.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
Maddingley MBC34-26]
Length = 500
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 134/257 (52%), Gaps = 28/257 (10%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIM N ++W +L+K +AGAD +E N SCPH GE G+G GQ+PE+V +
Sbjct: 201 IIVASIM-GQNDEEWTKLAKLMTEAGADIIECNFSCPHMTGE-GLGSDVGQNPELVAQYT 258
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI N+ A AA + A G++AINT+ +M+++ + P V
Sbjct: 259 KATRKGTNLPILAKMTPNIGNMEIPAMAAMKSGATGIAAINTIKSIMNVNLESFASEPNV 318
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+ GG SG A +P+ L+ + + + PI G+GGI++ A +F+ G
Sbjct: 319 EGK--TSVGGYSGKAVKPIALRFIHDMKNCEDLKSAPISGMGGIETWKDAAEFLALGCEN 376
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
+QI ++V + V+DD I+G++ LYL S K D G
Sbjct: 377 LQITTSVMQYGYRVIDDLISGMK--LYLSSQGYK-------------------NISDIIG 415
Query: 802 KAIPNFGEYKKIRENLI 818
KA+PN K+ + I
Sbjct: 416 KALPNIVPADKLERDSI 432
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D+IG+A+ + +L+ + + C+ C +CY++C D G+QAI ++++
Sbjct: 409 NISDIIGKALPNIVPADKLERDSICYPRFDREKCVGCERCYLSCYDGGHQAIKIDEKSNK 468
Query: 550 A-HVTDECTGCTLCLSILIA 568
+ D+C GC LC+++ A
Sbjct: 469 PILIADKCVGCQLCVTVCPA 488
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
VD+S++ CG NPF L+S+ + MV +AFE GW KT + + VSPR
Sbjct: 102 VDLSIDFCGANCENPFFLSSSVVGSNYEMVAKAFEMGWAGVAFKTIGMF--VPKEVSPRF 159
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
T +L P G F NIE IS+ T N KK++EN T++
Sbjct: 160 AT-LTKENL--PFIG-FKNIEQISDHTLE---------ENIDFIKKLKENYPTKI 201
>gi|455644543|gb|EMF23643.1| dihydropyrimidine dehydrogenase subunit B [Citrobacter freundii GTC
09479]
Length = 411
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSPLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D I+GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMISGLSHYL 304
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + ELD V I+ D C+ CG+CY++C D G+QA+ ++ ET
Sbjct: 311 SLEEMVGLANANIIPAEELDRSYIVYPNIHLDKCVGCGRCYISCYDGGHQAMEWNEETRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A+++GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDSGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLSKEDTGFIGFKNMEQIAEH 83
>gi|300727885|ref|ZP_07061264.1| dihydropyrimidine dehydrogenase [Prevotella bryantii B14]
gi|299774869|gb|EFI71482.1| dihydropyrimidine dehydrogenase [Prevotella bryantii B14]
Length = 508
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 133/230 (57%), Gaps = 16/230 (6%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM N+++W L++K E+AGAD +E N SCP+ M +G+ GQD ++ +
Sbjct: 206 VIVASIM-GQNEEEWTTLARKCEEAGADVIECNFSCPN-MENDKLGITIGQDATLIERFT 263
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
R +P K+TPNIT++ +A AA G ADG++AINT++ + + + V
Sbjct: 264 RATRLGTNLPILAKMTPNITDMVPMAIAAKRGGADGIAAINTINSITGVDLES----LVA 319
Query: 685 TKKLTTY---GGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGA 739
++ Y GG SG A +P+ L+ +S + ++ + I G+GGI+S A+ F+ GA
Sbjct: 320 KPEVHGYSMVGGYSGQAVKPIALRFISDLGHSEELADMHISGMGGIESWIDAVDFLALGA 379
Query: 740 HAVQICSAVQNQDFTVVDDYITGLQTLLYLKST---QLKGWDGQSPPTPV 786
+++Q+ ++V + +V+D I+GLQ YLK+ QLK G + T V
Sbjct: 380 NSLQVTTSVMQYGYRIVEDMISGLQ--FYLKAIHMDQLKKLSGVARKTVV 427
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+K + G A + V ++T+++ + N + CI CG+CY+AC D G+QAI F + +
Sbjct: 415 LKKLSGVARKTVVSHTQVERDTILYPHFNHEQCIGCGRCYVACMDGGHQAIAFDAKRRRP 474
Query: 551 H-VTDECTGCTLC 562
+ +C GC LC
Sbjct: 475 KLIGSKCVGCHLC 487
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 326 NNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGF 385
N+LT S D+ DIS +ICG+K NPF L+S+ + M+ AF GW
Sbjct: 87 NHLTEGSLSQYEALTSTADMPDISTDICGVKLENPFMLSSSVVASNYEMIANAFRAGWAG 146
Query: 386 AVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
KT SPR T S H F NIE +S+ +
Sbjct: 147 VSFKTICNFPQH--EASPRF--STISNH--ANAFCGFKNIEQLSDHS 187
>gi|281419484|ref|ZP_06250498.1| hydrogenase, Fe-only [Clostridium thermocellum JW20]
gi|281406890|gb|EFB37154.1| hydrogenase, Fe-only [Clostridium thermocellum JW20]
Length = 1149
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 153/296 (51%), Gaps = 34/296 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E+E++K LGVKI E++L I +E L KD + A+++ IG A
Sbjct: 245 IPEYRLPKAILDKEIEMIKKLGVKIMTEKALGIH-IRLEDLSKD-FDAVYLAIGSWQAT- 301
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
P+ + G + +L +VA K +P L V+V+G G+TA DCA
Sbjct: 302 -PMHIEGEKLDGVWAGINYLEQVA-----------KNVDIP-LGDNVVVIGGGNTAIDCA 348
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK----IA 219
+ALR GA V +V+R+ + A P EV+ A E E + M+P ++ VKD K
Sbjct: 349 RTALRKGAKSVKLVYRRTREEMPAAPYEVEEAIHEGVEMIFLMAPTKIIVKDGKKKLVCI 408
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST----LLDNDVLEAIKPVKLDKYG 275
MQ +++ + V E +++ A+ II A G + L ND+ PVKL+K+G
Sbjct: 409 RMQLGEPDRSGRRRPVPIEGSEVEIDADTIIGAIGQSTNTQFLYNDL-----PVKLNKWG 463
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA-----WHIHKYIQEKN 326
EVN T+ TS +F GGD T +++V G+ AA + + YI+E N
Sbjct: 464 DIEVNGKTLQTSEYNIFAGGDCVTGPATVIQAVAAGRQAAESMDSFLMKGYIKEAN 519
>gi|417359403|ref|ZP_12133787.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417384309|ref|ZP_12149719.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353589671|gb|EHC48404.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353609289|gb|EHC62642.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
Length = 411
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKHGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + +V+D +GL L
Sbjct: 278 TLQVTTAIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAEH 83
>gi|153955017|ref|YP_001395782.1| dihydropyrimidine dehydrogenase [Clostridium kluyveri DSM 555]
gi|219855458|ref|YP_002472580.1| hypothetical protein CKR_2115 [Clostridium kluyveri NBRC 12016]
gi|146347875|gb|EDK34411.1| PyrD1 [Clostridium kluyveri DSM 555]
gi|219569182|dbj|BAH07166.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 401
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 120/206 (58%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM +++W +L++ + GAD +E N SCP M + MG GQ PE+V N
Sbjct: 101 VLVASIM-GETEEEWTKLAEMVTQIGADIIECNFSCPQ-MSLQSMGADVGQSPELVENYC 158
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR +P K+TPN++++T A A+ G ADG++AINT+ + + + +P+P +
Sbjct: 159 RAVRKGTSLPILAKMTPNLSDMTIPAAASIRGGADGIAAINTIKSITRVDLNKFSPYPII 218
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
G K ++ G SG A +P+ L+ + +AK PI G+GGI++ + L+F+ GA
Sbjct: 219 GGK--SSVSGYSGKAIKPIALRFIQDLAKSPKLKGIPISGMGGIENWEDVLEFMLLGASN 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + ++ D I+GL +
Sbjct: 277 IQVTTAIMQYGYRIIKDLISGLSYYM 302
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ- 549
++D++G A++ V ELD V C+ CG+CY++C D G+QAI + E +
Sbjct: 310 LEDLVGFALKNVVPADELDRSYVVYPEFTYHNCVGCGRCYISCYDGGHQAIKWDYENRKP 369
Query: 550 AHVTDECTGCTLCLSI 565
+ + ++C GC LCL+I
Sbjct: 370 SLLKNKCAGCHLCLNI 385
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI- 405
D+S+E CG+K NPF L+S+ M +A + GW V KT + VSPR
Sbjct: 3 DLSIEFCGIKCENPFFLSSSVVGNNFEMCSKALDMGWAGVVFKTIGFY--IPNEVSPRFD 60
Query: 406 VKGTTSRHLYGPEQGSFLNIELISE 430
+ G + G F N+E IS+
Sbjct: 61 IIGKENAPFVG-----FRNLEQISD 80
>gi|326315758|ref|YP_004233430.1| dihydroorotate dehydrogenase family protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372594|gb|ADX44863.1| dihydroorotate dehydrogenase family protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 449
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 111/204 (54%), Gaps = 3/204 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM ++ W + E GAD +ELN CPHGM ERGMG A GQ PE ++ ++
Sbjct: 104 MIVSIMVPCVEESWKRILPMVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTQ 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
W + +P VKLTPNIT++ A+AA G AD VS INT++ +M + + + T
Sbjct: 164 WCKHYTHLPVIVKLTPNITDVRQPARAARAGGADAVSLINTINSIMGVDLERMAM-SPHT 222
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
++GG G A +P+ L V+ IA+ PI GIGG+ + A +FI G VQ
Sbjct: 223 GGWGSHGGYCGPAVKPIALNMVAEIARDAQTAGLPISGIGGVSTWRDAAEFIALGCGTVQ 282
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL 767
+C+A F +V D GL +
Sbjct: 283 VCTAAMVYGFKIVQDMCDGLSNFM 306
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
+++D G AV V ++ ELD A+IN D CI CG+C++ C D+ +QAITF E
Sbjct: 313 TIEDFRGGAVPTVKDWKELDLNHVDKAVINQDACIQCGRCHVVCEDTSHQAITFTQEGGA 372
Query: 550 AHV---TDECTGCTLCLSI 565
EC GC LC+SI
Sbjct: 373 RSFEVDESECVGCNLCVSI 391
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI + G++ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSDFLGIRSPNPFWLASAPPTDKEVNVTRAFEAGWGGVVWKTLGEDPHVVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEK 431
+ R + G NIELI+++
Sbjct: 61 YSTLMSQDRRVIG-----LNNIELITDR 83
>gi|256004229|ref|ZP_05429212.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|385777924|ref|YP_005687089.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|419721959|ref|ZP_14249111.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
gi|419727017|ref|ZP_14254027.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|255991819|gb|EEU01918.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|316939604|gb|ADU73638.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|380769603|gb|EIC03513.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|380781998|gb|EIC11644.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
Length = 1149
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 153/296 (51%), Gaps = 34/296 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E+E++K LGVKI E++L I +E L KD + A+++ IG A
Sbjct: 245 IPEYRLPKAILDKEIEMIKKLGVKIMTEKALGIH-IRLEDLSKD-FDAVYLAIGSWQAT- 301
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
P+ + G + +L +VA K +P L V+V+G G+TA DCA
Sbjct: 302 -PMHIEGEKLDGVWAGINYLEQVA-----------KNVDIP-LGDNVVVIGGGNTAIDCA 348
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK----IA 219
+ALR GA V +V+R+ + A P EV+ A E E + M+P ++ VKD K
Sbjct: 349 RTALRKGAKSVKLVYRRTREEMPAAPYEVEEAIHEGVEMIFLMAPTKIIVKDGKKKLVCI 408
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST----LLDNDVLEAIKPVKLDKYG 275
MQ +++ + V E +++ A+ II A G + L ND+ PVKL+K+G
Sbjct: 409 RMQLGEPDRSGRRRPVPIEGSEVEIDADTIIGAIGQSTNTQFLYNDL-----PVKLNKWG 463
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA-----WHIHKYIQEKN 326
EVN T+ TS +F GGD T +++V G+ AA + + YI+E N
Sbjct: 464 DIEVNGKTLQTSEYNIFAGGDCVTGPATVIQAVAAGRQAAESMDSFLMKGYIKEAN 519
>gi|289192997|ref|YP_003458938.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus sp.
FS406-22]
gi|288939447|gb|ADC70202.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus sp.
FS406-22]
Length = 302
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 117/181 (64%), Gaps = 11/181 (6%)
Query: 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
N++++ E++K+ EK D +ELN+SCPH +G G GQ+P++ ++ V+ +VK+P
Sbjct: 105 NEEEFAEVAKRMEKY-VDIIELNISCPHA---KGYGATIGQNPDLSYSVCKAVKKAVKVP 160
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
F KLTPN+T+I +IA+A + DG+ AINTV G M++ P +G K +GG+
Sbjct: 161 VFAKLTPNVTDIVEIAQAVVDAGVDGLVAINTVRG-MAIDIKAKK-PILGNK----FGGL 214
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT 754
SG A +P+G+K V + + F + PI+G+GGI S + A++++ AGA AVQI S V + +
Sbjct: 215 SGRAIKPIGIKVVWDLYENF-DVPIIGVGGIMSGEDAIEYMMAGASAVQIGSGVYYRGYD 273
Query: 755 V 755
+
Sbjct: 274 I 274
>gi|383767594|ref|YP_005446576.1| dihydropyrimidine dehydrogenase [Phycisphaera mikurensis NBRC
102666]
gi|381387863|dbj|BAM04679.1| dihydropyrimidine dehydrogenase [Phycisphaera mikurensis NBRC
102666]
Length = 394
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 7/196 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASIM +++D W E+ + E+AG D ELN SCPHG+ ER MG A G++P++V ++
Sbjct: 105 LIASIMEEHSRDAWAEVVGRCEEAGVDGFELNFSCPHGLPERKMGAAMGENPDLVEEVTG 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV ++ P + K+TPN+T I D ++AA A GVS INT+ ++ + P P V
Sbjct: 165 WVMAAASTPVWAKMTPNVTRIEDPSRAALSAGAHGVSVINTIRSIIGVDLKSLRPMPTV- 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFPILGIGGIDSADVALQFIQAGAH 740
+ TT GG S A +P+ L+ V ++ F I GIGGI++ A +FI GA
Sbjct: 224 -EGHTTPGGYSSVAVKPIALRMVMECRRLIDADFGGRSISGIGGIETGHDAAEFILLGAD 282
Query: 741 AVQICSAVQNQDFTVV 756
VQ+C+ V + + ++
Sbjct: 283 TVQVCTGVMKKGYRMI 298
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 352 ICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK--GT 409
+ G+ FPNPF + S PP T ++++AF+ GWG + KT SL VTNV+PR K G
Sbjct: 8 VDGITFPNPFLIGSGPPGTNQKVIKKAFQEGWGGVIAKTVSLDASKVTNVAPRYGKLTGE 67
Query: 410 TSRHLYGPEQGSFLNIELIS 429
+ ++G E NIELI+
Sbjct: 68 NKKEVFGWE-----NIELIA 82
>gi|224583312|ref|YP_002637110.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224467839|gb|ACN45669.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 411
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + S+ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITSIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|408411115|ref|ZP_11182298.1| Dihydroorotate oxidase [Lactobacillus sp. 66c]
gi|407874778|emb|CCK84104.1| Dihydroorotate oxidase [Lactobacillus sp. 66c]
Length = 309
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 134/249 (53%), Gaps = 26/249 (10%)
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
++ T + N K +AL+ D + G C + I P + H
Sbjct: 46 IKTATRHARTGNPKPQIALLEDGVMNAVGLTNPGCEVVASEKI---PALRKKHP------ 96
Query: 559 CTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPE 618
+ I + + + D+LE+++ A DALELNLSCP+ + E GM G PE
Sbjct: 97 -----DLPIMASVGGESVQDYLEVAEILASAKPDALELNLSCPN-VSEGGM--TFGIVPE 148
Query: 619 MVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADG 677
MV I+ V+ V IP +VKLTPN+T+IT IAKAA G ADG++ INT+ GL + L
Sbjct: 149 MVEEITKKVKERVDIPVYVKLTPNVTDITAIAKAAERGGADGLTLINTLLGLHLDLKTR- 207
Query: 678 NPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQA 737
P +G +GG+SG A +P+ ++ V+ + K N PI+G+GGI+SA+ A +FI A
Sbjct: 208 --RPVLGND----FGGLSGQAVKPVAVRMVAQVKKAV-NLPIIGVGGINSAEDAAEFILA 260
Query: 738 GAHAVQICS 746
GA AVQI S
Sbjct: 261 GASAVQIGS 269
>gi|417476370|ref|ZP_12170907.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|421409046|ref|ZP_15858841.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|437583596|ref|ZP_20792590.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437840315|ref|ZP_20846414.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|438129673|ref|ZP_20873373.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|445128470|ref|ZP_21380263.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|445154462|ref|ZP_21391789.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|445344327|ref|ZP_21417599.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|353641083|gb|EHC85901.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|396025977|gb|EJI34750.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|434941809|gb|ELL48196.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|435263494|gb|ELO42541.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435297100|gb|ELO73396.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|444850707|gb|ELX75804.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|444854932|gb|ELX79987.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|444880499|gb|ELY04574.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
Length = 335
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 85 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 201
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 202 TLQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 235 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|417512007|ref|ZP_12176455.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353641190|gb|EHC85985.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
Length = 365
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 57 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 114
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 115 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 174
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 175 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 231
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 232 TLQVTTGIMQYGYRIVEDMASGLSHYL 258
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 265 SLQEMIGLANDNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 324
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 325 PHCNTEKCVGCLLC 338
>gi|417466722|ref|ZP_12165071.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|353629888|gb|EHC77595.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
Length = 335
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 85 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 201
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 202 TLQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 235 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|389577656|ref|ZP_10167684.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
gi|389313141|gb|EIM58074.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
Length = 520
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 121/206 (58%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIM +++W +L+ E+AGAD +E N SCP +GE G+G G + E+V +
Sbjct: 220 IIIASIM-GRTEEEWTKLAALCEEAGADMIECNFSCPQMVGE-GLGCEVGINNELVETYT 277
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNP-WPAV 683
VR K+P K+TPNIT + + AKAA G ADG++AINT+ +M+++ + P+V
Sbjct: 278 RAVRKGTKLPVLAKMTPNITKMEEPAKAALRGGADGIAAINTIKSIMNVNFETYATAPSV 337
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
+ ++ G SG A +P+ L+ + + K + P+ G+GGI++ A +FI G
Sbjct: 338 AGR--SSVSGYSGKAVKPIALRFIHDLKKDPELKDVPVSGMGGIETWKDAAEFIALGCGT 395
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+ +AV + +++D I GL +
Sbjct: 396 VQVTTAVMQYGYRIIEDMIEGLSDYM 421
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I V D++G+A++ + +L+ N C+ CG+CY+AC D G+QAI ET
Sbjct: 426 IGHVSDLMGRALETIVAADDLNRSTIQFPAFNRKECVGCGRCYLACMDGGHQAIRQDEET 485
Query: 548 HQ-AHVTDECTGCTLCL 563
+ + +C GC LC+
Sbjct: 486 GKPILIGKKCVGCQLCV 502
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SVE G+KF NPF L+S+ + MV RAF+ GW KT + VSPR
Sbjct: 122 DLSVEFLGVKFENPFLLSSSVVGSNYEMVARAFDMGWAGVAFKTIGFF--VPDEVSPRF- 178
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T + P G F N+E IS+ +
Sbjct: 179 --ATLKKEGNPFVG-FKNLEQISDHS 201
>gi|213646116|ref|ZP_03376169.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|378958818|ref|YP_005216304.1| hypothetical protein STBHUCCB_7150, partial [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|374352690|gb|AEZ44451.1| hypothetical protein STBHUCCB_7150 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 335
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 85 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 201
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 202 TLQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +H
Sbjct: 235 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSHT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|167551143|ref|ZP_02344898.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205324061|gb|EDZ11900.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 411
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIAMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|437505344|ref|ZP_20775398.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435235401|gb|ELO16204.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
Length = 332
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 85 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 201
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 202 TLQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 235 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|417540393|ref|ZP_12192433.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353662760|gb|EHD01657.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
Length = 371
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 63 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 120
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 121 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 180
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 181 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 237
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 238 TLQVTTGIMQYGYRIVEDMASGLSHYL 264
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 271 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 330
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 331 PHCNTEKCVGCLLC 344
>gi|395230575|ref|ZP_10408879.1| dihydroorotate dehydrogenase family protein [Citrobacter sp. A1]
gi|421846549|ref|ZP_16279696.1| dihydropyrimidine dehydrogenase subunit B [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|424731364|ref|ZP_18159948.1| dihydropyrimidine dehydrogenase [Citrobacter sp. L17]
gi|394715960|gb|EJF21745.1| dihydroorotate dehydrogenase family protein [Citrobacter sp. A1]
gi|411772143|gb|EKS55781.1| dihydropyrimidine dehydrogenase subunit B [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|422894015|gb|EKU33830.1| dihydropyrimidine dehydrogenase [Citrobacter sp. L17]
Length = 411
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++ AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVVLAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D I+GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMISGLSHYL 304
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + ELD V I+ D C+ CG+CY++C D G+QA+ ++ ET
Sbjct: 311 SLEEMVGLANANIIPAEELDRSYIVYPNIHLDKCVGCGRCYISCYDGGHQAMEWNEETRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A+++GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDSGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLSKEDTGFIGFKNMEQIAEH 83
>gi|417366425|ref|ZP_12138718.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353591971|gb|EHC50108.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 371
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 63 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 120
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 121 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 180
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 181 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 237
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 238 TLQVTTGIMQYGYRIVEDMASGLSHYL 264
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 271 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 330
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 331 PHCNTEKCVGCLLC 344
>gi|419718517|ref|ZP_14245834.1| dihydropyrimidine dehydrogenase, B subunit [Lachnoanaerobaculum
saburreum F0468]
gi|383305352|gb|EIC96720.1| dihydropyrimidine dehydrogenase, B subunit [Lachnoanaerobaculum
saburreum F0468]
Length = 420
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 120/206 (58%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++++SIM N D+W L+K++EKAGAD +E N SCP M MG GQ+P++V++
Sbjct: 104 VIVSSIMGA-NDDEWAILAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
SS K+P K+TPN+ N+ A+AA EG A G++AINTV + +L + P V
Sbjct: 162 EVASSSTKLPIIAKMTPNLGNMEIPARAALEGGAKGIAAINTVKSITNLDINLRTGMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G SG A +P+ L+ +S + + PI G+GGI++ L+F+ GA
Sbjct: 222 NGK--SAISGYSGAAVKPIALRFISDLMHDPIVSKVPITGMGGIETWRDCLEFLMLGASN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I+G+ +
Sbjct: 280 LQVTTAVMQYGYRIVEDMISGMSHYM 305
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I ++D++G AV + +LD +++ I+ + C+ CG+CY++C D+ +QAI + ET
Sbjct: 310 IGKLQDIVGSAVGNIVGADDLDRSYKILVQIDKEKCVKCGRCYVSCFDAAHQAIEYDYET 369
Query: 548 HQAHVTDE-CTGCTLCLSI 565
+ +E C GC LCL++
Sbjct: 370 RVPTINEEKCVGCHLCLNV 388
>gi|311278870|ref|YP_003941101.1| dihydroorotate dehydrogenase family protein [Enterobacter cloacae
SCF1]
gi|308748065|gb|ADO47817.1| dihydroorotate dehydrogenase family protein [Enterobacter cloacae
SCF1]
Length = 411
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
++LIASIM N+ W EL+ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 102 NVLIASIM-GENEQQWQELAHLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKY 159
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNP-WPA 682
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P
Sbjct: 160 CRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKTGMPI 219
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAH 740
V K ++ G SG A +P+ L+ V + +FPI GIGGI++ + A +F+ GA
Sbjct: 220 VNGK--SSISGYSGKAVKPIALRFVQQLRTHPELKDFPISGIGGIENWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D I+GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMISGLSHYL 304
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ +++G A + ELD V I+ D C+ CG+CY++C D G+QA+ ++ +T
Sbjct: 311 ALDEMVGLANSNIVPAEELDRSYIVYPQIHLDKCVGCGRCYISCYDGGHQAMEWNEDTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFVGFKNMEQIAEH 83
>gi|421883593|ref|ZP_16314822.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|379986819|emb|CCF87095.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
Length = 411
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V +N + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEELDRSYIVYPRLNQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|416424073|ref|ZP_11691341.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416434198|ref|ZP_11697532.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438403|ref|ZP_11699490.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416447748|ref|ZP_11706001.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416450545|ref|ZP_11707620.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416460465|ref|ZP_11714773.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416470242|ref|ZP_11718767.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416476706|ref|ZP_11721194.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416491433|ref|ZP_11727067.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416496171|ref|ZP_11729028.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416575357|ref|ZP_11768389.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586630|ref|ZP_11775642.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594602|ref|ZP_11780434.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416602141|ref|ZP_11785198.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416607211|ref|ZP_11788393.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416611798|ref|ZP_11791027.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416623876|ref|ZP_11797658.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416630118|ref|ZP_11800525.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416636553|ref|ZP_11803116.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416652104|ref|ZP_11811506.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416655358|ref|ZP_11812516.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416669135|ref|ZP_11819160.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416678676|ref|ZP_11822730.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416700978|ref|ZP_11829243.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416705402|ref|ZP_11830883.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416713658|ref|ZP_11837213.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416720143|ref|ZP_11841909.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416721579|ref|ZP_11842744.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416733935|ref|ZP_11850730.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416738171|ref|ZP_11853199.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416751876|ref|ZP_11860277.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416759752|ref|ZP_11864577.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416760407|ref|ZP_11864800.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|418484888|ref|ZP_13053878.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418486676|ref|ZP_13055625.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418496961|ref|ZP_13063386.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418500325|ref|ZP_13066723.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418503299|ref|ZP_13069664.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418509324|ref|ZP_13075620.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418528001|ref|ZP_13093954.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|322615214|gb|EFY12136.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617805|gb|EFY14701.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624602|gb|EFY21433.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626948|gb|EFY23744.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634134|gb|EFY30870.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635675|gb|EFY32385.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640190|gb|EFY36854.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646387|gb|EFY42899.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649354|gb|EFY45790.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656475|gb|EFY52764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322665661|gb|EFY61845.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667185|gb|EFY63352.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671191|gb|EFY67319.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675169|gb|EFY71246.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680777|gb|EFY76812.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686952|gb|EFY82929.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192716|gb|EFZ77943.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198852|gb|EFZ83951.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205138|gb|EFZ90116.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323213535|gb|EFZ98326.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215794|gb|EGA00537.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221293|gb|EGA05716.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223841|gb|EGA08144.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231240|gb|EGA15355.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233674|gb|EGA17766.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237744|gb|EGA21804.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245727|gb|EGA29721.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246535|gb|EGA30514.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253020|gb|EGA36853.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254772|gb|EGA38575.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259528|gb|EGA43163.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268311|gb|EGA51786.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|366055964|gb|EHN20297.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366057192|gb|EHN21496.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366069178|gb|EHN33304.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366072975|gb|EHN37055.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366073141|gb|EHN37216.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366078514|gb|EHN42515.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366827204|gb|EHN54113.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372204125|gb|EHP17656.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
Length = 411
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPN F L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNSFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|291085135|ref|ZP_06352165.2| dihydroorotate dehydrogenase family protein [Citrobacter youngae
ATCC 29220]
gi|291072078|gb|EFE10187.1| dihydroorotate dehydrogenase family protein [Citrobacter youngae
ATCC 29220]
Length = 380
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 72 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 129
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 130 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 189
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 190 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 246
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 247 TLQVTTGIMQYGYRIVEDMTSGLSHYL 273
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V I+ D C+ CG+CY++C D G+QA+ ++ ET
Sbjct: 280 SLEEMVGLANANIIPAEDLDRSYIVYPNIHLDKCVGCGRCYISCYDGGHQAMEWNEETRT 339
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 340 PHCDTEKCVGCLLC 353
>gi|194736993|ref|YP_002115276.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194712495|gb|ACF91716.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPQINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|375002011|ref|ZP_09726351.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353076699|gb|EHB42459.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 380
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 72 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 129
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 130 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 189
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 190 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 246
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 247 TLQVTTGIMQYGYRIVEDMASGLSHYL 273
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 280 SLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 339
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 340 PHCNTEKCVGCLLC 353
>gi|417519272|ref|ZP_12181459.1| Dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353647059|gb|EHC90290.1| Dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY +C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYTSCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|418827447|ref|ZP_13382594.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392799656|gb|EJA55912.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
Length = 436
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|416508122|ref|ZP_11735905.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416513718|ref|ZP_11738039.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416529764|ref|ZP_11744531.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416539691|ref|ZP_11750098.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416551699|ref|ZP_11756605.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416561691|ref|ZP_11761688.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363552167|gb|EHL36473.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363552737|gb|EHL37020.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363559771|gb|EHL43923.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363566114|gb|EHL50133.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363567298|gb|EHL51298.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363573884|gb|EHL57758.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|417334902|ref|ZP_12117934.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|353573376|gb|EHC36754.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
Length = 380
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 72 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 129
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 130 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 189
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 190 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 246
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 247 TLQVTTGIMQYGYRIVEDMASGLSHYL 273
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 280 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 339
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 340 PHCNTEKCVGCLLC 353
>gi|423140758|ref|ZP_17128396.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379053312|gb|EHY71203.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANSNIIPAEELDRSYIVYPQINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+ FPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVTFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAEH 83
>gi|16765517|ref|NP_461132.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62180774|ref|YP_217191.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161613121|ref|YP_001587086.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167991114|ref|ZP_02572213.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168229542|ref|ZP_02654600.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168259472|ref|ZP_02681445.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168466133|ref|ZP_02700003.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818103|ref|ZP_02830103.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194470352|ref|ZP_03076336.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248087|ref|YP_002147158.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198241985|ref|YP_002216271.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205353322|ref|YP_002227123.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857621|ref|YP_002244272.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238912629|ref|ZP_04656466.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|374981221|ref|ZP_09722551.1| Dihydropyrimidine [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375115103|ref|ZP_09760273.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375119755|ref|ZP_09764922.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375124161|ref|ZP_09769325.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378445622|ref|YP_005233254.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378450874|ref|YP_005238233.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700100|ref|YP_005182057.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378954454|ref|YP_005211941.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378984749|ref|YP_005247904.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989574|ref|YP_005252738.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701415|ref|YP_005243143.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383496895|ref|YP_005397584.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|409250799|ref|YP_006886607.1| Dihydropyrimidine dehydrogenase [NADP+] DHPDHase; DPD;
Dihydrouracil dehydrogenase; Dihydrothymine
dehydrogenase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416566652|ref|ZP_11763944.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|417342389|ref|ZP_12123214.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417374445|ref|ZP_12144198.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|417532274|ref|ZP_12186707.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|418512904|ref|ZP_13079139.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|418760501|ref|ZP_13316655.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765102|ref|ZP_13321195.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418772116|ref|ZP_13328120.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775332|ref|ZP_13331290.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418781495|ref|ZP_13337378.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418783761|ref|ZP_13339606.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418803296|ref|ZP_13358917.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419789721|ref|ZP_14315401.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|419792217|ref|ZP_14317859.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|421359399|ref|ZP_15809692.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421364031|ref|ZP_15814269.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421367071|ref|ZP_15817273.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421373051|ref|ZP_15823196.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421375416|ref|ZP_15825529.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421382198|ref|ZP_15832249.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421386912|ref|ZP_15836918.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421391251|ref|ZP_15841222.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421395621|ref|ZP_15845557.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421397940|ref|ZP_15847849.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421402505|ref|ZP_15852363.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421411773|ref|ZP_15861537.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421418187|ref|ZP_15867893.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421422745|ref|ZP_15872413.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421424897|ref|ZP_15874534.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421433231|ref|ZP_15882799.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434132|ref|ZP_15883682.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421441874|ref|ZP_15891334.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421443239|ref|ZP_15892681.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421449781|ref|ZP_15899161.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|422026463|ref|ZP_16372854.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422031484|ref|ZP_16377653.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427551122|ref|ZP_18928157.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427567354|ref|ZP_18932872.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427587564|ref|ZP_18937662.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427611274|ref|ZP_18942529.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427634869|ref|ZP_18947422.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427656494|ref|ZP_18952187.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427661646|ref|ZP_18957100.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427670208|ref|ZP_18961900.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|436609108|ref|ZP_20513669.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436726188|ref|ZP_20519101.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436802770|ref|ZP_20525503.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436809497|ref|ZP_20528877.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436814751|ref|ZP_20532302.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436844173|ref|ZP_20537931.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436854497|ref|ZP_20544131.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855779|ref|ZP_20544904.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436864280|ref|ZP_20550247.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870253|ref|ZP_20554059.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877744|ref|ZP_20558672.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886683|ref|ZP_20563103.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436893538|ref|ZP_20567445.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436901286|ref|ZP_20572196.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436912677|ref|ZP_20578506.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920317|ref|ZP_20582913.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436926654|ref|ZP_20586480.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436936626|ref|ZP_20592066.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940638|ref|ZP_20594582.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436946638|ref|ZP_20598165.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436961980|ref|ZP_20605354.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436969168|ref|ZP_20608289.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436976843|ref|ZP_20612093.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436989610|ref|ZP_20616617.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437001022|ref|ZP_20620818.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437022385|ref|ZP_20628354.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437036133|ref|ZP_20633865.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437044127|ref|ZP_20637080.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052088|ref|ZP_20641648.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437059146|ref|ZP_20645993.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064811|ref|ZP_20648585.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437077133|ref|ZP_20655341.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437083617|ref|ZP_20659271.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437092037|ref|ZP_20663637.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437113876|ref|ZP_20669078.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122069|ref|ZP_20672106.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437128649|ref|ZP_20675336.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437139192|ref|ZP_20681674.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437144136|ref|ZP_20684750.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151272|ref|ZP_20689149.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437162706|ref|ZP_20696268.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437169954|ref|ZP_20700049.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437174140|ref|ZP_20702105.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437181180|ref|ZP_20706351.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437235897|ref|ZP_20713883.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|437261932|ref|ZP_20718678.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437267384|ref|ZP_20721136.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437280655|ref|ZP_20728032.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437289937|ref|ZP_20731315.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437311877|ref|ZP_20735985.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437330415|ref|ZP_20741579.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437346870|ref|ZP_20747024.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437411010|ref|ZP_20752786.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437433704|ref|ZP_20756305.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437461027|ref|ZP_20761980.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437494364|ref|ZP_20772393.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437535227|ref|ZP_20781461.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437559628|ref|ZP_20785844.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437572293|ref|ZP_20789055.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437599999|ref|ZP_20797158.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437662170|ref|ZP_20813387.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437686458|ref|ZP_20819381.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437690113|ref|ZP_20820207.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437711827|ref|ZP_20826845.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437730240|ref|ZP_20831166.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437813082|ref|ZP_20841667.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437876693|ref|ZP_20848668.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|438041795|ref|ZP_20855774.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438082726|ref|ZP_20857912.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438099372|ref|ZP_20863388.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438109505|ref|ZP_20867468.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|440763099|ref|ZP_20942146.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440769251|ref|ZP_20948211.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440771396|ref|ZP_20950314.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445146626|ref|ZP_21387840.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445165194|ref|ZP_21394077.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445185315|ref|ZP_21398916.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445229402|ref|ZP_21405046.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445265159|ref|ZP_21410054.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|445337489|ref|ZP_21415980.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445361598|ref|ZP_21423890.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|81522477|sp|Q8ZNL7.1|PREA_SALTY RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|16420724|gb|AAL21091.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62128407|gb|AAX66110.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161362485|gb|ABX66253.1| hypothetical protein SPAB_00829 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194456716|gb|EDX45555.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195631189|gb|EDX49749.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197211790|gb|ACH49187.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197936501|gb|ACH73834.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205273103|emb|CAR38058.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330434|gb|EDZ17198.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335946|gb|EDZ22710.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205345012|gb|EDZ31776.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205351177|gb|EDZ37808.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709424|emb|CAR33765.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261247401|emb|CBG25226.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994252|gb|ACY89137.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158748|emb|CBW18260.1| hypothetical oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913177|dbj|BAJ37151.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086627|emb|CBY96398.1| Dihydropyrimidine dehydrogenase [NADP+] DHPDHase; DPD;
Dihydrouracil dehydrogenase; Dihydrothymine
dehydrogenase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321224841|gb|EFX49904.1| Dihydropyrimidine [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322715249|gb|EFZ06820.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323130514|gb|ADX17944.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|326624022|gb|EGE30367.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326628411|gb|EGE34754.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332989121|gb|AEF08104.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353599483|gb|EHC55641.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353663117|gb|EHD01907.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|357205065|gb|AET53111.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357956702|gb|EHJ82024.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|363579488|gb|EHL63270.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366082841|gb|EHN46771.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|380463716|gb|AFD59119.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|392615506|gb|EIW97945.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392618941|gb|EIX01327.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392732230|gb|EIZ89441.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392742051|gb|EIZ99146.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742581|gb|EIZ99668.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392747263|gb|EJA04264.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392748405|gb|EJA05391.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392756773|gb|EJA13668.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392772825|gb|EJA29522.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|395985022|gb|EJH94195.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|395985506|gb|EJH94676.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|395989726|gb|EJH98860.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395998679|gb|EJI07706.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|395999298|gb|EJI08320.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396005402|gb|EJI14381.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396011553|gb|EJI20463.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396012260|gb|EJI21158.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396012661|gb|EJI21557.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396032042|gb|EJI40767.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396032136|gb|EJI40860.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396039354|gb|EJI47982.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396042060|gb|EJI50683.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396045274|gb|EJI53868.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396049447|gb|EJI57990.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396058493|gb|EJI66954.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396060738|gb|EJI69179.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396062551|gb|EJI70962.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396068597|gb|EJI76943.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396071023|gb|EJI79350.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|414017541|gb|EKT01249.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414018485|gb|EKT02134.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414020242|gb|EKT03831.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414032225|gb|EKT15236.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414033646|gb|EKT16595.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414036625|gb|EKT19442.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414046794|gb|EKT29109.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414047797|gb|EKT30063.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414052541|gb|EKT34577.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414059231|gb|EKT40820.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|434957037|gb|ELL50711.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434967314|gb|ELL60149.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434970288|gb|ELL62908.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434972867|gb|ELL65255.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978759|gb|ELL70751.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434982523|gb|ELL74342.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434983300|gb|ELL75108.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434991993|gb|ELL83463.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995315|gb|ELL86631.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002581|gb|ELL93646.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435008628|gb|ELL99451.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011926|gb|ELM02629.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435018534|gb|ELM08996.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435020720|gb|ELM11109.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435026922|gb|ELM17053.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435027836|gb|ELM17928.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435036495|gb|ELM26314.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435039464|gb|ELM29245.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435045543|gb|ELM35171.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435051119|gb|ELM40623.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435058438|gb|ELM47776.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435059269|gb|ELM48559.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435071177|gb|ELM60127.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435071319|gb|ELM60267.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435074467|gb|ELM63299.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435075576|gb|ELM64390.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435077013|gb|ELM65787.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435081331|gb|ELM69973.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435091490|gb|ELM79881.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435094959|gb|ELM83298.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435100553|gb|ELM88721.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435103971|gb|ELM92045.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435107360|gb|ELM95345.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435112943|gb|ELN00808.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435116174|gb|ELN03925.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435124215|gb|ELN11682.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435128165|gb|ELN15516.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435132714|gb|ELN19912.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435139127|gb|ELN26131.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435142626|gb|ELN29513.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435145155|gb|ELN31984.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435147734|gb|ELN34486.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435157989|gb|ELN44410.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435162303|gb|ELN48487.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435166728|gb|ELN52694.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435170143|gb|ELN55899.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435175900|gb|ELN61302.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435182201|gb|ELN67233.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435183009|gb|ELN67984.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435188922|gb|ELN73584.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435189298|gb|ELN73943.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435189599|gb|ELN74223.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435204215|gb|ELN87912.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435214119|gb|ELN96961.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435220719|gb|ELO03001.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435227262|gb|ELO08771.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435238939|gb|ELO19548.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435240588|gb|ELO20979.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435247933|gb|ELO27862.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435262917|gb|ELO41999.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435266310|gb|ELO45071.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435267816|gb|ELO46481.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435281742|gb|ELO59395.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435288047|gb|ELO65138.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435289501|gb|ELO66461.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435297164|gb|ELO73459.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435320384|gb|ELO93023.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435321870|gb|ELO94219.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435325926|gb|ELO97770.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435332654|gb|ELP03565.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|435334216|gb|ELP04864.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|436415239|gb|ELP13160.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436421028|gb|ELP18879.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|436421742|gb|ELP19585.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|444845523|gb|ELX70733.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444865495|gb|ELX90265.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444867032|gb|ELX91737.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444870131|gb|ELX94668.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444873376|gb|ELX97676.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444884604|gb|ELY08428.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|444888310|gb|ELY11900.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|168242273|ref|ZP_02667205.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194448536|ref|YP_002046240.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261723|ref|ZP_03161797.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200387718|ref|ZP_03214330.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|386591998|ref|YP_006088398.1| Dihydropyrimidine dehydrogenase [NADP+] [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|419728293|ref|ZP_14255259.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419736476|ref|ZP_14263316.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419741039|ref|ZP_14267751.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419745194|ref|ZP_14271837.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419746836|ref|ZP_14273411.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421570026|ref|ZP_16015720.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421574423|ref|ZP_16020044.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421585701|ref|ZP_16031193.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|194406840|gb|ACF67059.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|197239978|gb|EDY22598.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199604816|gb|EDZ03361.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205338639|gb|EDZ25403.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|381291785|gb|EIC33014.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381292983|gb|EIC34156.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381299830|gb|EIC40898.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381306618|gb|EIC47491.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381320710|gb|EIC61252.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383799042|gb|AFH46124.1| Dihydropyrimidine dehydrogenase [NADP+] [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402524623|gb|EJW31920.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402525519|gb|EJW32807.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402529551|gb|EJW36784.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|194446223|ref|YP_002041458.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418789265|ref|ZP_13345052.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418794066|ref|ZP_13349788.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418796663|ref|ZP_13352354.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418809739|ref|ZP_13365291.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813893|ref|ZP_13369414.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418815160|ref|ZP_13370668.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418822949|ref|ZP_13378360.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418830006|ref|ZP_13384969.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836388|ref|ZP_13391272.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840994|ref|ZP_13395817.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418850868|ref|ZP_13405584.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855817|ref|ZP_13410468.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418857925|ref|ZP_13412548.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862220|ref|ZP_13416764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|194404886|gb|ACF65108.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392760506|gb|EJA17341.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392762061|gb|EJA18877.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392770036|gb|EJA26764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392773824|gb|EJA30520.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392775119|gb|EJA31814.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392787206|gb|EJA43754.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392793539|gb|EJA49983.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392800749|gb|EJA56979.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392802239|gb|EJA58453.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392809660|gb|EJA65694.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392818718|gb|EJA74602.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392820858|gb|EJA76699.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392834603|gb|EJA90207.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392836672|gb|EJA92252.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|339999950|ref|YP_004730833.1| pyrimidine metabolism oxidoreductase [Salmonella bongori NCTC
12419]
gi|339513311|emb|CCC31061.1| putative pyrimidine metabolism oxidoreductase [Salmonella bongori
NCTC 12419]
Length = 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPQINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|437742065|ref|ZP_20833322.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|435313146|gb|ELO86889.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
Length = 319
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 85 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 201
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 202 TLQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 235 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|437616829|ref|ZP_20802581.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435261557|gb|ELO40711.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
Length = 394
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHVTDECTGCTLCLSILIA 568
H + +C +++ A
Sbjct: 371 PHCNRK-NASVVCCAVMSA 388
>gi|386855847|ref|YP_006260024.1| Dihydroorotate dehydrogenase family protein [Deinococcus gobiensis
I-0]
gi|379999376|gb|AFD24566.1| Dihydroorotate dehydrogenase family protein [Deinococcus gobiensis
I-0]
Length = 459
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 7/207 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S M + W ++ E GAD +ELN CP GM ERGMG A GQ PEM +
Sbjct: 101 VIVSAMVDADPKAWRDIVMMIEDTGADGIELNYGCPQGMSERGMGAAVGQVPEMCELNTH 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
WV S ++P VKLTPNIT IT+ A AA G A+ +S INT++ +M + D P++G
Sbjct: 161 WVTSVTRLPVIVKLTPNITRITEPAHAALAGGANALSLINTINSIMKVDLDTLQITPSIG 220
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK----MFPNFPILGIGGIDSADVALQFIQAGAH 740
+ T+GG +G A +P+ L +S + PI G+GGI + A +F+ GA
Sbjct: 221 GRG--THGGYAGPAVKPIALNLLSELVTDEDVRRSGVPICGMGGIQTWRDAAEFLLLGAT 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+VQ+C+A + + +V+D I GL +
Sbjct: 279 SVQVCTAAMHYGYRIVEDMIDGLSNWM 305
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+SV G++ PNPF LASAPPT + + + RAFE GWG AV KT V N+S R
Sbjct: 1 MADLSVNFAGIRAPNPFWLASAPPTNSGAQIHRAFEYGWGGAVWKTIGAP---VLNISNR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEK 431
+ L G + N+ELIS++
Sbjct: 58 Y----SGLSLGGQRLLAINNVELISDR 80
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFH 544
S+ DV G+AV +V+ + +LD Q VA I+ D CI C CY+ACND+ +Q I H
Sbjct: 312 SIDDVAGRAVPQVSTFGQLDLGYQAVARIHADKCIGCNLCYVACNDTAHQCIDLH 366
>gi|417327486|ref|ZP_12112891.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353570493|gb|EHC34745.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 424
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 116 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 173
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 174 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 233
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 234 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 290
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 291 TLQVTTGIMQYGYRIVEDMASGLSHYL 317
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 324 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 383
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 384 PHCNTEKCVGCLLC 397
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKD---------- 396
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFANPPAIGRKTIGF 64
Query: 397 -MVTNVSPRIVKGTTSRHLYGPEQG--SFLNIELISE 430
+ VSPR HL + G F N+E I+E
Sbjct: 65 FIANEVSPRF------DHLTKEDTGFIGFKNMEQIAE 95
>gi|417391890|ref|ZP_12154909.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353613886|gb|EHC65875.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 423
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 115 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 172
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 173 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 232
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 233 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 289
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 290 TLQVTTGIMQYGYRIVEDMASGLSHYL 316
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 323 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 382
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 383 PHCNTEKCVGCLLC 396
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKD---------- 396
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFLNKATPGVAIGFF 64
Query: 397 MVTNVSPRIVKGTTSRHLYGPEQG--SFLNIELISE 430
+ VSPR HL + G F N+E I+E
Sbjct: 65 IANEVSPRF------DHLTKEDTGFIGFKNMEQIAE 94
>gi|168236356|ref|ZP_02661414.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197290436|gb|EDY29791.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 411
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPQINQEKCVGCGRCYISCYDGGHQAMGWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|423720340|ref|ZP_17694522.1| dihydropyrimidine dehydrogenase subunit B, FMN-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
gi|383366677|gb|EID43964.1| dihydropyrimidine dehydrogenase subunit B, FMN-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
Length = 421
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ SIM + N+++W+ L+K +AGAD LELN SCP M MG GQ+PE+VR
Sbjct: 103 VIGVSIMGS-NEEEWITLAKAVTEAGADILELNFSCPQ-MTSHAMGADVGQNPELVRKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
V + +P K+TPNIT + + A AA +G A G+SAINT+ + ++ D P V
Sbjct: 161 KAVVENTHLPVVAKMTPNITRMEEPAIAAAQGGAHGISAINTIKSITNIDLDILTGRPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ +AK + + GIGGI++ AL+FI G
Sbjct: 221 NGK--SSISGYSGKAIKPIALRFIAELAKCKELKSVQLSGIGGIETWQDALEFILLGCRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+ +AV + +V+D I+G+ +
Sbjct: 279 VQVTTAVMQYGYRIVEDLISGISHFM 304
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ +++G A+ + ELD +++ I++D C+ CG+CY++C D +QAI + ET +
Sbjct: 312 LDELVGLALNNIVPAEELDRSFKIIPRIDEDKCVGCGRCYVSCFDGAHQAIVWDSETRKP 371
Query: 551 HV-TDECTGCTLCLSI 565
+ D C GC LCL++
Sbjct: 372 RILEDHCVGCHLCLNV 387
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR-- 404
D+S++ G+ NPF L+S+P + MV +AF+ GWG KT ++ + SPR
Sbjct: 5 DLSIDFLGVHCENPFFLSSSPVCNNAEMVAKAFDAGWGGIFYKTVGIKG--MDECSPRFD 62
Query: 405 -IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ K +T P G F N+E ISE + N E KK+++N
Sbjct: 63 ILTKEST------PWAG-FKNMEQISEMSME---------QNLEEIKKLKKN 98
>gi|312111355|ref|YP_003989671.1| dihydroorotate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|336235800|ref|YP_004588416.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216456|gb|ADP75060.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y4.1MC1]
gi|335362655|gb|AEH48335.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 422
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ SIM + N+++W+ L+K +AGAD LELN SCP M MG GQ+PE+VR
Sbjct: 104 VIGVSIMGS-NEEEWITLAKAVTEAGADILELNFSCPQ-MTSHAMGADVGQNPELVRKYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
V + +P K+TPNIT + + A AA +G A G+SAINT+ + ++ D P V
Sbjct: 162 KAVVENTHLPVVAKMTPNITRMEEPAIAAAQGGAHGISAINTIKSITNIDLDILTGRPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ +AK + + GIGGI++ AL+FI G
Sbjct: 222 NGK--SSISGYSGKAIKPIALRFIAELAKCKELKSVQLSGIGGIETWQDALEFILLGCRN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+ +AV + +V+D I+G+ +
Sbjct: 280 VQVTTAVMQYGYRIVEDLISGISHFM 305
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ +++G A+ + ELD +++ I++D C+ CG+CY++C D +QAI + ET +
Sbjct: 313 LDELVGLALNNIVPAEELDRSFKIIPRIDEDKCVGCGRCYVSCFDGAHQAIVWDSETRKP 372
Query: 551 HV-TDECTGCTLCLSI 565
+ D C GC LCL++
Sbjct: 373 RILEDHCVGCHLCLNV 388
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR-- 404
D+S++ G+ NPF L+S+P + MV +AF+ GWG KT ++ + SPR
Sbjct: 6 DLSIDFLGVHCENPFFLSSSPVCNNAEMVAKAFDAGWGGIFYKTVGIKG--MDECSPRFD 63
Query: 405 -IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ K +T P G F N+E ISE + N E KK+++N
Sbjct: 64 ILTKEST------PWAG-FKNMEQISEMSME---------QNLEEIKKLKKN 99
>gi|416540667|ref|ZP_11750472.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322661451|gb|EFY57675.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
Length = 366
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPN F L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNSFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF 543
S++++IG A + ELD V IN + C+ CG+CY++C D G+QA+ +
Sbjct: 311 SLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEW 364
>gi|204929087|ref|ZP_03220230.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|452119608|ref|YP_007469856.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|204321631|gb|EDZ06830.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|451908612|gb|AGF80418.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 411
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-QMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|333977685|ref|YP_004515630.1| glutamate synthase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821166|gb|AEG13829.1| Glutamate synthase (NADPH) [Desulfotomaculum kuznetsovii DSM 6115]
Length = 1475
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 154/316 (48%), Gaps = 35/316 (11%)
Query: 34 PVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIF 93
PVA IP+YRLP V+ EV+L+ LGV+ + L RDIT+E LR+ GY A+F
Sbjct: 284 PVAGGMMRVGIPEYRLPKKWVDLEVDLLSRLGVEFKFNTRLG-RDITLESLRQ-GYEAVF 341
Query: 94 IGIGKPNANVIPIFQGLTEEM-GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VI 151
+ +G ++ P G E++ G +FL RVA P+ G V
Sbjct: 342 LAVGAHRSST-PGVPG--EDLPGVEQGISFLRRVALGE-------------PVTVGRRVA 385
Query: 152 VLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV 211
V+G G+TA DCA +A+R GA +V +V+R+ I A+PEE+ A EE +F+ SPV+
Sbjct: 386 VIGGGNTAMDCARTAVRLGAGEVYIVYRRSEAEITALPEEIAAAKEEGIQFIMLTSPVRF 445
Query: 212 DVKDNKIAGMQF--NRTEQNEKG---EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI 266
++ ++ ++ NR E G V E L + +I A G D L
Sbjct: 446 IGEEGRLVRIECVKNRLEHARDGGRPRPVPVEGSEFTLDVDMVILATGQQ-PDLSCLNGS 504
Query: 267 KPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKY----- 321
P P+ T+AT +PGVF GGD T ++++ GK AA IH+Y
Sbjct: 505 IPAGNTIPADPD----TLATGIPGVFAGGDCVTGPKTVIDAIAAGKVAAESIHRYLSGQD 560
Query: 322 IQEKNNLTVPDKPCLP 337
++E VP++ P
Sbjct: 561 LKEGRQFRVPEEKIAP 576
>gi|347817716|ref|ZP_08871150.1| dihydropyrimidine dehydrogenase subunit B [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 441
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
L+ S+M + W + + E GAD +ELN CPHGM ERGMG A GQ PE +R ++
Sbjct: 104 LLVSLMVPCEEQGWKRILAQVEDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIRMVTA 163
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW-PAVG 684
W + ++P VKLTPN+T++ A+AA G AD VS INT++ +M + D P+
Sbjct: 164 WCKHHSRLPVVVKLTPNVTDVRLPARAARAGGADAVSLINTINSVMGVDLDRMVMLPS-- 221
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
T ++GG G A +P+ L V+ IA+ + P+ GIGG+ + A ++I G V
Sbjct: 222 TAGQGSHGGYCGPAVKPIALNMVAEIARDARTADLPLSGIGGVGNWRDAAEYIALGCGTV 281
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V D GL +
Sbjct: 282 QVCTAAMVYGFRIVQDMCDGLSNFM 306
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ D G+A+ V ++ LD ALI+ D CI CG+C++ C D+ +QAIT + +
Sbjct: 313 TLDDFRGRALASVRDWQSLDLGHVEKALIDQDACIRCGRCHVVCEDTAHQAITAMVDGVR 372
Query: 550 AHVT--DECTGCTLCLSI 565
+EC GC LC SI
Sbjct: 373 RFQVKEEECVGCNLCASI 390
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ DI G++ PNPF LASAPPT V RAFE GWG V KT +V PR
Sbjct: 1 MADIRSNFLGIRSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPPIVNVNGPR 60
Query: 405 IVK-GTTSRHLYGPEQGSFLNIELISEK 431
R + G NIELI+++
Sbjct: 61 YATLMAQDRRVIG-----LNNIELITDR 83
>gi|383760816|ref|YP_005439799.1| putative dihydroorotate dehydrogenase family protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381368114|dbj|BAL84935.1| putative dihydroorotate dehydrogenase family protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 502
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 7/215 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ASIM N +W EL++ ++ GADALELN SCP+ M E G+G GQ PE+V +
Sbjct: 200 FILASIM-GRNDREWAELARLCQENGADALELNFSCPNMM-EDGLGSDIGQVPELVERFT 257
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
R IP KLTPN+ + A+AA G ADG++AINT+ LMS++ PAV
Sbjct: 258 AAARRGASIPLLAKLTPNVAAMGPAAEAARNGGADGLAAINTIKSLMSVNLHTFVTSPAV 317
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + GG SGNA +P+ L+ ++ + + I G+GG+++ AL+F+ GA +
Sbjct: 318 --KGQSAVGGYSGNAVKPIALRFIAELGQNPKLSGMHISGMGGVETWRDALEFMMLGAGS 375
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKG 776
+Q+ +AV + +++D GL L+ K G
Sbjct: 376 IQVTTAVMQYGYRIIEDLKAGLNYYLHEKGFSRAG 410
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 493 DVIGQAVQRVTNYTELDNKKQVV-ALINDDMCINCGKCYMACNDSGYQAITFHPETHQAH 551
DV+G A+ V+ T++ + +V + CI CG+C ++C D G+QAI
Sbjct: 411 DVVGLALDSVSETTDVLERDSIVYPKFHRQTCIGCGRCEISCMDGGHQAIHLDKNRRPVL 470
Query: 552 VTDECTGCTLCLSI 565
C GC LC+ +
Sbjct: 471 APKRCVGCHLCVLV 484
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ EICG+ NPF L+S+ + M RAFE GW A KT + SPR
Sbjct: 103 LQTEICGIPLENPFLLSSSVVASTYDMCARAFEAGWAGAAFKTICAFD--IHEASPRF-- 158
Query: 408 GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNS 467
++ H F NIE +S+ + +F+ + K I +++ + +
Sbjct: 159 --SAIHSADGSIMGFKNIEQLSDHSLPENMEIFRQLKKDYPQKFILASIMGRNDREWAEL 216
Query: 468 DGVSLQNGLPKRQINTPVETIL--SVKDVIGQAVQRVTNYTELDNKKQVVALI 518
+ +NG ++N ++ + IGQ + V +T + + L+
Sbjct: 217 ARLCQENGADALELNFSCPNMMEDGLGSDIGQVPELVERFTAAARRGASIPLL 269
>gi|432103875|gb|ELK30708.1| Dihydropyrimidine dehydrogenase [NADP+] [Myotis davidii]
Length = 313
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFEVEL+KDLGVKI C RSLS D+T+ L+ +GY A FIGIG P
Sbjct: 155 TSEIPQFRLPYDVVNFEVELMKDLGVKIVCGRSLSVNDMTLHTLKAEGYKAAFIGIGLPE 214
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPIL 146
N IFQGLT++ GFYTSK FLP VA SK G K++ LP L
Sbjct: 215 PNKDHIFQGLTQDQGFYTSKDFLPLVAKGSKAG-----KRQRLPFL 255
>gi|13542001|ref|NP_111689.1| dihydroorotate dehydrogenase 1B [Thermoplasma volcanium GSS1]
gi|30173362|sp|Q979G6.1|PYRDB_THEVO RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|14325433|dbj|BAB60337.1| dihydroorotate oxidase [Thermoplasma volcanium GSS1]
Length = 301
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 112/183 (61%), Gaps = 13/183 (7%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+ YN +++ +LS K E+ G DA+ELNLSCPH +G GL G DP++V +I
Sbjct: 95 IIGSVFA-YNAEEFTKLSVKMEEYGVDAIELNLSCPH---VKGFGLEVGSDPDLVEDIVN 150
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++S VK+P F KL+PN++NI +IAKAA KAD INTV + +P +
Sbjct: 151 EIKSKVKVPVFAKLSPNVSNIIEIAKAAE--KADAYVLINTVKAMAIDIYSRSPVLS--- 205
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
YGG+SG A +P+G++ V + K I+G+GGI + A+++I AGA AVQI
Sbjct: 206 ---NLYGGLSGPAIKPVGIRYVYEVKKETGK-EIIGVGGISNYKDAIEYIMAGASAVQIG 261
Query: 746 SAV 748
+A+
Sbjct: 262 TAL 264
>gi|432869516|ref|ZP_20090109.1| dihydroorotate dehydrogenase [Escherichia coli KTE147]
gi|431410102|gb|ELG93264.1| dihydroorotate dehydrogenase [Escherichia coli KTE147]
Length = 411
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + NFPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRNFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432602708|ref|ZP_19838952.1| dihydroorotate dehydrogenase [Escherichia coli KTE66]
gi|431141282|gb|ELE43047.1| dihydroorotate dehydrogenase [Escherichia coli KTE66]
Length = 411
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + NFPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRNFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|410695355|ref|YP_003625977.1| Dihydropyrimidine dehydrogenase [Thiomonas sp. 3As]
gi|294341780|emb|CAZ90209.1| Dihydropyrimidine dehydrogenase [Thiomonas sp. 3As]
Length = 438
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
++ S+M + W + + E G D +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 MVVSLMVPCEEAAWKAILPRVEDTGCDGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTA 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLS-ADGNPWPAVG 684
W + ++P VKLTPNIT++ A+AA G AD VS INT++ ++ + A P+ G
Sbjct: 165 WCKRYSRLPVIVKLTPNITDVRQPARAARAGGADAVSLINTINSIIGVDPATLTMTPSTG 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
+ ++GG G A +P+ L V+ IA+ PI GIGGI + AL FI GA +V
Sbjct: 225 GRG--SHGGYCGPAVKPIALNMVADIARDPKTAGLPISGIGGIGNWRDALDFIALGAGSV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+C+A F +V + GL +
Sbjct: 283 QVCTAAMVYGFKIVQEMTDGLSNYM 307
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ ++ G++ PNPF LASAPPT + V RAFE GWG V KT V NV+ P
Sbjct: 1 MADLRIDFAGIRSPNPFWLASAPPTDKAVNVNRAFEAGWGGVVWKTLGEAGPPVVNVNGP 60
Query: 404 RI-VKGTTSRHLYGPEQGSFLNIELISEK 431
R T R L G F NIELI+++
Sbjct: 61 RYGALLTPDRRLLG-----FNNIELITDR 84
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + G+A+ VT++ L+ A+I+ +CI CG+C++AC D+ +QAIT + +
Sbjct: 314 SVAQLTGKALPSVTDWKYLNLNHISKAVIDQALCIQCGRCHIACEDTSHQAITATVDGQR 373
Query: 550 AHVTDE--CTGCTLCLSI 565
V E C GC LC+++
Sbjct: 374 RFVVKEEDCVGCNLCVNV 391
>gi|148264457|ref|YP_001231163.1| putative oxidoreductase [Geobacter uraniireducens Rf4]
gi|146397957|gb|ABQ26590.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Geobacter
uraniireducens Rf4]
Length = 471
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 159/291 (54%), Gaps = 27/291 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ EV+ + LGV+IEC + + +T+++LR+ + A+FI N
Sbjct: 192 IPEFRLPKEIIDVEVDRLLALGVEIECNVIIG-KTMTLDQLREQ-FDAVFIA----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKES-LPILKG-TVIVLGAGDTA 159
+P+ + E G Y++ FL RV GC S PI+KG +V V+G G+TA
Sbjct: 246 LPVMLNMPGENLKGVYSANEFLTRVNLME-----AGCNPNSPTPIIKGNSVAVIGGGNTA 300
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK-- 217
DC +A R GA + ++++R+ + A EE++ A EE EF+ +P+++ + D+K
Sbjct: 301 MDCVRTARRLGAERAMIIYRRSEAEMPARIEEIRHAKEEGVEFVMLTAPLEI-IGDDKGW 359
Query: 218 -----IAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
M+ +++++ + + V R ++ + +++A G+ N +L A P + L
Sbjct: 360 TAALSCEKMELGQSDESGRRKPVPVANSRYEVPVDVVVNAIGTR--SNPLLTATAPDLAL 417
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+K+G V+ ATS+PGVF GGD T + ++ DGK AA IH ++
Sbjct: 418 NKWGNI-VSDEQGATSIPGVFAGGDIVRGGATVILAMGDGKQAAAAIHGFL 467
>gi|408417856|ref|YP_006759270.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Desulfobacula toluolica Tol2]
gi|405105069|emb|CCK78566.1| predicted FAD-dependent pyridine nucleotide-disulfide
oxidoreductase [Desulfobacula toluolica Tol2]
Length = 721
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 154/302 (50%), Gaps = 29/302 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTR---DITIEKLRKDGYTAIFIGIGKPN 100
IP+YRLP + ++ EV ++++LGV+I S +TR D+T + L+K+GY A FI IG
Sbjct: 244 IPRYRLPREVIDREVAMIEELGVQI----SYNTRFGKDVTFDALKKEGYDAFFIAIGAHK 299
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ + I +G + + TFL VA + V+++G G+ A
Sbjct: 300 SWSLDI-KGEKDFPKVLDAVTFLKDVALGNHHAP------------GRHVVIVGGGNVAI 346
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
D A ++LR GA KV + +R+ + A EEV+ A EE EF P ++ ++ I G
Sbjct: 347 DAARTSLRLGAQKVTIAYRRSRNQMPADIEEVEQAQEEGIEFSFLTIPKEIKGENGVITG 406
Query: 221 MQFNRTE-----QNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
+ + E +++ V + ++A+ +I A G + DN +EA V + G
Sbjct: 407 LDCIKAELIKKKGSDRLAPVPILGKDFTIRADAVIPAIGQYVDDNG-MEAFDRVNWTRRG 465
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPC 335
EVN+ +M T++PGVF GD + T +E++ G+ AA I +Y+ NN+ P P
Sbjct: 466 TIEVNHASMETTMPGVFAAGDAVSGPATVIEAIGGGRRAADAIDRYL---NNIPQPRMPK 522
Query: 336 LP 337
+P
Sbjct: 523 IP 524
>gi|167768313|ref|ZP_02440366.1| hypothetical protein CLOSS21_02869 [Clostridium sp. SS2/1]
gi|317497756|ref|ZP_07956069.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429761880|ref|ZP_19294290.1| dihydropyrimidine dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|167709837|gb|EDS20416.1| dihydropyrimidine dehydrogenase [Clostridium sp. SS2/1]
gi|291560289|emb|CBL39089.1| dihydroorotate oxidase B, catalytic subunit [butyrate-producing
bacterium SSC/2]
gi|316894945|gb|EFV17114.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429182665|gb|EKY23753.1| dihydropyrimidine dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 418
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 135/250 (54%), Gaps = 16/250 (6%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM + N ++W L+K +AG D +E N SCP M MG GQ+PE+V++
Sbjct: 104 VIVASIMGS-NDEEWTTLAKAVTEAGVDMIECNFSCPQ-MTSHAMGSDVGQNPELVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V ++ +P K+TPNI N+ A A+ EG A G++AINTV + ++ + P V
Sbjct: 162 EVVTAATHLPVIAKMTPNIGNMEIPAIASMEGGAAGIAAINTVKAITNIDIENITAMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ ++ + K P N PI G+GGI++ AL+FI GA
Sbjct: 222 NGK--SSISGYSGAAVKPIALRFITQM-KQHPDLVNVPITGVGGIETWRDALEFILVGAS 278
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDK 799
+Q+ +AV + +V+D I+GL + + L G + P V PA D+
Sbjct: 279 NLQVTTAVMQYGYRIVEDMISGLSHYMEDNGIEKLSDLVGLALPNIV-----PAEDL-DR 332
Query: 800 EGKAIPNFGE 809
K +P F E
Sbjct: 333 SFKLLPKFDE 342
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I + D++G A+ + +LD +++ ++D C CG+CY++C D G+QAI + E
Sbjct: 310 IEKLSDLVGLALPNIVPAEDLDRSFKLLPKFDEDACAGCGRCYVSCFDGGHQAIDWDEEA 369
Query: 548 HQAHV-TDECTGCTLCLSI 565
+ + TD+C GC LCL++
Sbjct: 370 RRPRLNTDKCVGCHLCLNV 388
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+K NPF L+S+P + M +A E GWG KT + + SPR
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVGSNYEMCAKALEAGWGGIYYKTIGIF--IPDECSPRFD 63
Query: 407 KGTTSRHLYGPEQGSFLNIELISEK 431
T G F N+E IS+K
Sbjct: 64 ITTKE----GTPWVGFKNMEQISDK 84
>gi|432543755|ref|ZP_19780598.1| dihydroorotate dehydrogenase [Escherichia coli KTE236]
gi|432549245|ref|ZP_19786013.1| dihydroorotate dehydrogenase [Escherichia coli KTE237]
gi|432622398|ref|ZP_19858429.1| dihydroorotate dehydrogenase [Escherichia coli KTE76]
gi|432815886|ref|ZP_20049670.1| dihydroorotate dehydrogenase [Escherichia coli KTE115]
gi|431074165|gb|ELD81729.1| dihydroorotate dehydrogenase [Escherichia coli KTE236]
gi|431079523|gb|ELD86477.1| dihydroorotate dehydrogenase [Escherichia coli KTE237]
gi|431159198|gb|ELE59755.1| dihydroorotate dehydrogenase [Escherichia coli KTE76]
gi|431364110|gb|ELG50654.1| dihydroorotate dehydrogenase [Escherichia coli KTE115]
Length = 411
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + I +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQIRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|404483014|ref|ZP_11018239.1| dihydroorotate dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344104|gb|EJZ70463.1| dihydroorotate dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 420
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++++SIM + D+W L+K++EKAGAD +E N SCP M MG GQ+P++V++
Sbjct: 104 VIVSSIMGATD-DEWAILAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
SS K+P K+TPN+ N+ A+AA EG A G++AINTV + +L + P V
Sbjct: 162 EVASSSTKLPIIAKMTPNLGNMEIPARAAIEGGAKGIAAINTVKSITNLDINLRTGMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G SG A +P+ L+ +S + + PI G+GGI++ L+F+ GA
Sbjct: 222 NGK--SAISGYSGAAVKPIALRFISDLMHDPIVSKVPITGMGGIETWRDCLEFLMLGASN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I+G+ +
Sbjct: 280 LQVTTAVMQYGYRIVEDMISGMSHYM 305
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I ++D++G AV + +LD +++ I+ + C+ CG+CY++C D+ +QAI + T
Sbjct: 310 INKLQDIVGTAVGNIVGADDLDRSYKILVQIDKEKCVGCGRCYVSCFDAAHQAIEYDYAT 369
Query: 548 HQAHVT-DECTGCTLCLSI 565
+ D+C GC LCL++
Sbjct: 370 RVPTINEDKCVGCHLCLNV 388
>gi|406911198|gb|EKD51042.1| hypothetical protein ACD_62C00358G0002 [uncultured bacterium]
Length = 413
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L++SIM Y DW L+K +E AGAD LELN SCP M + G GQ+ + V +
Sbjct: 107 VLVSSIM-GYENADWELLAKMSEDAGADMLELNFSCPQ-MARKDAGHRVGQNYDAVSHFC 164
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
+ ++P K+TPNIT++ +A AA EG AD +SAINT+ G+ + + P P +
Sbjct: 165 EATKKGSRLPVIAKMTPNITDMVPVALAAKEGGADAISAINTIRGITDIDVENFVPCPTI 224
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAV 742
+ T G SG A +P+ L+ VS + + P+ GIGGI + ALQF GA V
Sbjct: 225 HGQSSIT--GCSGWAAKPVALRFVSELYNSKELSLPVSGIGGITTWRDALQFFLCGATNV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
Q+ +A+ + +V+D I GL +
Sbjct: 283 QVTTAIMRYGYRIVEDMIEGLSDWM 307
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I S+ ++IG A +++ + +EL+N+ QVV+ I+ D CI CG+C+++C+D QAI F
Sbjct: 312 ITSLNEIIGNAAKKLIDPSELNNRYQVVSQIDADKCIGCGQCWISCHDGANQAIKFDASL 371
Query: 548 HQAHVTD-ECTGCTLCLSI 565
+A V + C GC LC I
Sbjct: 372 RKASVDETRCVGCLLCKHI 390
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQ-KDMVTNVSPRI 405
++ + CG+ NPF L+S+P + ++ M RA++ GWG V KT +L+ K V SPR+
Sbjct: 6 NLKINFCGVTCENPFFLSSSPVSNSAEMCERAYDAGWGGIVYKTLNLESKFKVVMPSPRL 65
>gi|291558287|emb|CBL35404.1| dihydroorotate oxidase B, catalytic subunit [Eubacterium siraeum
V10Sc8a]
Length = 494
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+++SIM ++D+W L++ +E+AG D +E N SCP M MG G +PE+V +
Sbjct: 194 IIVSSIM-GESEDEWTALARLSEEAGVDMIECNFSCPQ-MTSHSMGSDVGTNPELVAKYT 251
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR K+P K+TPNITN+ A AA ADG++AINTV + ++ D P P +
Sbjct: 252 AAVRRGTKLPVLAKMTPNITNMEIPAIAAVNAGADGIAAINTVKSITNVDLDSFVPAPDI 311
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + GG SG A +P+ L+ +S + + N I G+GGI++ L+FI G
Sbjct: 312 NGK--SAVGGYSGKAVKPIALRFISDMKRNETLENVEISGMGGIETWRDGLEFILMGCTN 369
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + ++DD + GL L
Sbjct: 370 LQVTTSVMQYGYRIIDDMLDGLSRWL 395
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV +V+G A + +T+ LD + + + C+ CG+CY+AC D+G+QA+ F E +
Sbjct: 402 SVSEVVGLANKNMTDAGSLDRDTVTYPIFDKNKCVGCGRCYIACYDAGHQALDFDAEARK 461
Query: 550 -AHVTDECTGCTLCLSI 565
+ +C GC LC ++
Sbjct: 462 PVFLGSKCVGCHLCATV 478
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR-- 404
D+S+ CGLK NPF L+S+ + M +A + GW V KT K + VSPR
Sbjct: 96 DLSMTFCGLKCENPFFLSSSVVASGYDMCAKALDMGWAGIVYKTIGFAK--MNEVSPRFD 153
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
I+ T+ ++ F N+E IS+ N KK++EN T++
Sbjct: 154 ILNKETTPYI------GFKNLEQISDHPLE---------ENLAILKKLKENYPTKI 194
>gi|291531974|emb|CBK97559.1| dihydroorotate oxidase B, catalytic subunit [Eubacterium siraeum
70/3]
Length = 494
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+++SIM ++D+W L++ +E+AG D +E N SCP M MG G +PE+V +
Sbjct: 194 IIVSSIM-GESEDEWTALARLSEEAGVDMIECNFSCPQ-MTSHSMGSDVGTNPELVTKYT 251
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR K+P K+TPNITN+ A AA ADG++AINTV + ++ D P P +
Sbjct: 252 AAVRRGTKLPVLAKMTPNITNMEIPAIAAVNAGADGIAAINTVKSITNVDLDSFVPTPDI 311
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + GG SG A +P+ L+ +S + + N I G+GGI++ L+FI G
Sbjct: 312 NGK--SAVGGYSGKAVKPIALRFISDMKRNETLENVEISGMGGIETWRDGLEFILMGCTN 369
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + ++DD + GL L
Sbjct: 370 LQVTTSVMQYGYRIIDDMLDGLSRWL 395
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV +V+G A + +T+ LD + + + CI CG+CY+AC D+G+QA+ F +T +
Sbjct: 402 SVSEVVGLANKNMTDAGSLDRDTVTYPIFDKNKCIGCGRCYIACYDAGHQALDFDSKTRK 461
Query: 550 -AHVTDECTGCTLCLSI 565
+ +C GC LC ++
Sbjct: 462 PVFLGSKCVGCHLCATV 478
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR- 404
VD+S+ CGLK NPF L+S+ + M +A + GW V KT K + VSPR
Sbjct: 95 VDLSMTFCGLKCENPFFLSSSVVASGYDMCAKALDMGWAGIVYKTIGFAK--MNEVSPRF 152
Query: 405 -IVKGTTSRHLYGPEQGSFLNIELISE 430
I+ T+ ++ F N+E IS+
Sbjct: 153 DILNKETTPYI------GFKNLEQISD 173
>gi|417708182|ref|ZP_12357215.1| hypothetical protein SFVA6_3000 [Shigella flexneri VA-6]
gi|420332029|ref|ZP_14833685.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri K-1770]
gi|333001282|gb|EGK20850.1| hypothetical protein SFVA6_3000 [Shigella flexneri VA-6]
gi|391250924|gb|EIQ10143.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri K-1770]
Length = 411
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V+
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+ FPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVNFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|419002687|ref|ZP_13550214.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1B]
gi|377847566|gb|EHU12564.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1B]
Length = 411
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRAHPELHDFPISGIGGIETREDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|365174374|ref|ZP_09361824.1| dihydroorotate dehydrogenase [Synergistes sp. 3_1_syn1]
gi|363615311|gb|EHL66779.1| dihydroorotate dehydrogenase [Synergistes sp. 3_1_syn1]
Length = 407
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 10/228 (4%)
Query: 566 LIASIMCTYN--KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+IASI+ + K+ W + E AGADA+ELN SCPHG E G G++ G +P +R I
Sbjct: 113 VIASILYGHAPIKEKWQRAAADCELAGADAIELNFSCPHGCSEIGSGVSIGGNPAKIREI 172
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WV+ + ++P KLT +++I A + E AD + AINT+S + + + P +
Sbjct: 173 IGWVKEATRLPLITKLTA-LSDIVYAAALSEECGADAICAINTISSMPGIDLE-TFRPRM 230
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
+ T GG+SG+ +P+ L++V IA+ P+ G GGI A +FI AGA +Q
Sbjct: 231 NAGGVGTAGGLSGHMIKPIALRSVLEIARAV-KIPVSGSGGIYDWREAAEFILAGASTLQ 289
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWD---GQSPPTPVHQ 788
ICSAV Q + ++ GL Y++ K D G++ + VH
Sbjct: 290 ICSAVMEQGYGIIGGLCNGLSA--YMERMGFKDIDAFRGRALGSIVHH 335
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 354 GLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSL----QKDMVTNVSPRIVKGT 409
G++ PNPF LASAPP M+ RAF+ GWG AV KT + + + +VSPRI
Sbjct: 11 GVEMPNPFMLASAPPARDRDMIDRAFQAGWGGAVIKTLTQYTGEEGSEIRDVSPRIFPIR 70
Query: 410 TSRHLYGPEQGSFLNIELISEKT 432
S ++ ++NIEL S+KT
Sbjct: 71 GSGGVFKNVVFGYMNIELTSQKT 93
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 496 GQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDE 555
G+A+ + ++ ++D + ++ C CGKC ++C D+GYQAIT + + +
Sbjct: 326 GRALGSIVHHADIDRGRLFKPYLDIMKCSCCGKCAVSCRDAGYQAITLSRGGVRIEL-ER 384
Query: 556 CTGCTLCLSI 565
CTGC LC +
Sbjct: 385 CTGCGLCYGL 394
>gi|440782168|ref|ZP_20960288.1| dihydropyrimidine dehydrogenase subunit B [Clostridium pasteurianum
DSM 525]
gi|440220197|gb|ELP59405.1| dihydropyrimidine dehydrogenase subunit B [Clostridium pasteurianum
DSM 525]
Length = 399
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
IL+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+PE+V+
Sbjct: 101 ILVASIM-GQNEQEWTELAKLVTEIGADIIECNFSCPQ-MASDAMGSDVGQNPELVKRYC 158
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
R +P K+TPNI N+ A AA EG A G++AINT+ + + D +P V
Sbjct: 159 EATRKGSNLPILAKMTPNIGNMEIPAIAAMEGGATGLAAINTIKSITKIDLDSFLSYPIV 218
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + +AK PI G+GGI++ + A +FI G+
Sbjct: 219 NGK--SSVSGYSGKAVKPIALRFIHDLAKNETLKGVPISGMGGIETWEDAAEFILLGSTN 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +++D I+GL +
Sbjct: 277 LQVTTAVMQYGYRIIEDLISGLSYYM 302
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ- 549
++D++G A++ + ELD + +++ C+ CG+CY++C D G+QAI + + +
Sbjct: 310 LQDMVGLALENIVPAEELDRNFILYPSFDENTCVGCGRCYISCYDGGHQAIKWESDLRRP 369
Query: 550 AHVTDECTGCTLCLSI 565
+ D+C GC LC ++
Sbjct: 370 ILMEDKCVGCHLCANV 385
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKT--FSLQKDMVTNVSPR 404
D+S+E CG+K NPF L+S+ M +A E GWG V KT F + K+ VSPR
Sbjct: 3 DLSIEFCGVKCENPFFLSSSVVGNNFEMCAKALEMGWGGVVFKTIGFYVSKE----VSPR 58
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
G G F N+E ISE +
Sbjct: 59 FDTIGKEGTPFIG-----FKNLEQISEHS 82
>gi|359413486|ref|ZP_09205951.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
DL-VIII]
gi|357172370|gb|EHJ00545.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
DL-VIII]
Length = 500
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 139/253 (54%), Gaps = 18/253 (7%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM N+++W +L++ +AGAD +E N SCPH GE G+G GQ+PE+V +
Sbjct: 201 VIVASIM-GQNEEEWTKLARLMTEAGADIIECNFSCPHMTGE-GLGSDVGQNPELVALYT 258
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI N+ A AA + A G++AINT+ +M++ + P V
Sbjct: 259 KATRKGTHLPILAKMTPNIGNMEIPAMAAMKAGATGIAAINTIKSIMNIDLESFESAPNV 318
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSS--IAKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ GG SG A +P+ L+ + + + + + PI G+GGI++ A +F+ G
Sbjct: 319 EGK--SSVGGYSGKAVKPIALRFIHNMKVCEDLKDAPISGMGGIETWVDAAEFLALGCEN 376
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWD---GQSPPTPVHQKGKPAYQFRD 798
+QI ++V + ++DD I G++ LYL S K G++ P V PA + +
Sbjct: 377 LQITTSVMQYGYRIIDDLIGGMK--LYLSSQGYKSVGEIIGKALPNIV-----PADEL-E 428
Query: 799 KEGKAIPNFGEYK 811
++G P F K
Sbjct: 429 RDGICYPKFDREK 441
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV ++IG+A+ + EL+ + + C+ CG+CY++C D G+QAI +T++
Sbjct: 409 SVGEIIGKALPNIVPADELERDGICYPKFDREKCLGCGRCYLSCFDGGHQAIKMDEKTNK 468
Query: 550 AH-VTDECTGCTLCLSI 565
+ ++C GC LC ++
Sbjct: 469 PMLIANKCVGCQLCSTV 485
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
VD+S++ CG+ NPF L+S+ + MV +AF+ GW KT + + VSPR
Sbjct: 102 VDLSIDFCGVHTENPFFLSSSVVGSNYEMVAKAFDMGWAGVAFKTIGMF--VPKEVSPRF 159
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEKT 432
T +L P G F NIE IS+ T
Sbjct: 160 A-ALTKENL--PFIG-FKNIEQISDHT 182
>gi|386705409|ref|YP_006169256.1| hypothetical protein P12B_c2241 [Escherichia coli P12b]
gi|383103577|gb|AFG41086.1| hypothetical protein P12B_c2241 [Escherichia coli P12b]
Length = 411
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ+PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQNPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|291543218|emb|CBL16327.1| dihydroorotate oxidase B, catalytic subunit [Ruminococcus
champanellensis 18P13]
Length = 486
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++++SIM N+ +W EL++++E+AGAD +E N SCP G G+G GQDPE+VR +
Sbjct: 189 VIVSSIM-GRNEAEWTELARRSEQAGADIIECNFSCPQMCGN-GLGSDVGQDPELVRAYT 246
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR ++P K+TPN+ ++ A AA E ADG++AINTV + + D P V
Sbjct: 247 AAVRKGTRLPILAKMTPNLAHMELPAIAAVEAGADGLAAINTVKSITGVDLDSMASLPQV 306
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
+ + G SG A +P+ L+ + +A PI G+GGI++ A +F+ G
Sbjct: 307 DGRSAVS--GYSGKAVKPIALRFIYDMASCDRLKGVPISGMGGIETWQDAAEFLALGCGN 364
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +++D + GL L
Sbjct: 365 LQVTTAVMQYGYRIIEDLLYGLADYL 390
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV+ ++G V ++ +L+ V + CI CG+C ++C D G+QAIT +
Sbjct: 397 SVEQLVGAGVGKIVPAEQLNRSTLVYPKFDQSRCIGCGRCCISCEDGGHQAITLR-KGKP 455
Query: 550 AHVTDECTGCTLC 562
C GC LC
Sbjct: 456 VLDAARCVGCHLC 468
>gi|444970119|ref|ZP_21287495.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1793]
gi|444579672|gb|ELV55649.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1793]
Length = 335
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 85 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 202
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 203 LQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 235 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|420373814|ref|ZP_14873877.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri 1235-66]
gi|391316837|gb|EIQ74222.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri 1235-66]
Length = 411
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHNMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLRTHSELHDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + ELD V IN + C+ CG+CY++C D G+QA+ ++ ET
Sbjct: 311 SLEEMVGLANANIIPAEELDRSYIVYPHINLEKCVGCGRCYISCYDGGHQAMEWNEETRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCDTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A+++GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDSGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAEH 83
>gi|293446497|ref|ZP_06662919.1| yeiA protein [Escherichia coli B088]
gi|291323327|gb|EFE62755.1| yeiA protein [Escherichia coli B088]
Length = 335
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 85 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 202
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 203 LQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 235 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|399889561|ref|ZP_10775438.1| dihydropyrimidine dehydrogenase subunit B [Clostridium arbusti
SL206]
Length = 399
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
IL+ASIM N+ +W +L+K + GAD +E N SCP M MG GQ+PE+V+
Sbjct: 101 ILVASIM-GQNEHEWTDLAKLVTEIGADIIECNFSCPQ-MANNDMGSDVGQNPELVKKYC 158
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
R +P K+TPNI N+ A AA EG A G++AINT+ + + D +P V
Sbjct: 159 QATRRGTNLPILAKMTPNIGNMEVPAIAAMEGGATGLAAINTIKSITKIDLDSFLSYPIV 218
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + +A K PI G+GGI++ + A +FI G+
Sbjct: 219 NGK--SSVSGYSGKAVKPIALRFIHDMAKNKTLKGVPISGMGGIETWEDAAEFILLGSTN 276
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QI +AV + +++D I+GL +
Sbjct: 277 LQITTAVMQYGYRIIEDLISGLSYYM 302
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ- 549
++D++G A++ + ELD + ++D C+ CG+CY++C D G+QAI + + +
Sbjct: 310 LEDMVGLALENIVPAEELDRSFILYPSFDEDKCVGCGRCYISCYDGGHQAIKWESDIRKP 369
Query: 550 AHVTDECTGCTLCLSI 565
+ D+C GC LC +
Sbjct: 370 ILLEDKCVGCHLCTKV 385
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKT--FSLQKDMVTNVSPR 404
D+S+E CG+K NPF L+S+ M +A E GWG V KT F + K+ VSPR
Sbjct: 3 DLSIEFCGVKCENPFFLSSSVVGNNFEMCAKALEMGWGGVVFKTIGFYVSKE----VSPR 58
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEKT 432
G G F N+E ISE +
Sbjct: 59 FDTIGKEGTPFIG-----FKNLEQISEHS 82
>gi|453328831|dbj|GAC88928.1| dihydropyrimidine dehydrogenase [Gluconobacter thailandicus NBRC
3255]
Length = 422
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VIVSLMVPCEEDKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPN+TNI A+AA G AD VS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNVTNILMPARAARAGGADAVSLINTIQSVIGVDLDAMAPMPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK---MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+GG G A +P+ L+ + IA+ M G + D A +F+ GA +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGEIARDPTMAGIPISGIGGISNWRDSA-EFLAMGAGS 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+C+A + F +V+D I GL +
Sbjct: 280 LQVCTAAMHYGFRIVEDMIDGLSNWM 305
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ DV G+AV R + +L+ K + +A I+ D CI CG C++AC D+ +QAI+ +
Sbjct: 313 LDDVTGRAVSRFVPWNQLNMKFRTIADIDQDACIGCGLCHIACEDTSHQAISKRNGPDRR 372
Query: 551 H---VTDECTGCTLCLSI 565
H + DEC GC LC +
Sbjct: 373 HYEVIDDECVGCNLCAHV 390
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+K PNPF LASAPPT VRRAF+ GWG V KT + V N+S R
Sbjct: 1 MADLRTVFAGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVWKTLG-EDPPVVNLSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
G R L G NIELIS++
Sbjct: 60 YGALGFEGRRLIG-----LNNIELISDR 82
>gi|414342597|ref|YP_006984118.1| dihydropyrimidine dehydrogenase subunit B [Gluconobacter oxydans
H24]
gi|411027932|gb|AFW01187.1| dihydropyrimidine dehydrogenase subunit B [Gluconobacter oxydans
H24]
Length = 422
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VIVSLMVPCEEDKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPN+TNI A+AA G AD VS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNVTNILMPARAARAGGADAVSLINTIQSVIGVDLDAMAPMPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK---MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+GG G A +P+ L+ + IA+ M G + D A +F+ GA +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGEIARDPTMAGISISGIGGISNWRDSA-EFLAMGAGS 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+C+A + F +V+D I GL +
Sbjct: 280 LQVCTAAMHYGFRIVEDMIDGLSNWM 305
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
+ DV G+AV R + +L+ K + +A I+ D CI CG C++AC D+ +QAI+ +
Sbjct: 313 LDDVTGRAVSRFVPWNQLNMKFRTIADIDQDACIGCGLCHIACEDTSHQAISKRNGPDRR 372
Query: 551 H---VTDECTGCTLCLSI 565
H + DEC GC LC +
Sbjct: 373 HYEVIDDECVGCNLCAHV 390
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+K PNPF LASAPPT VRRAF+ GWG V KT + V N+S R
Sbjct: 1 MADLRTVFAGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVWKTLG-EDPPVVNLSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
G R L G NIELIS++
Sbjct: 60 YGALGFEGRRLIG-----LNNIELISDR 82
>gi|402312550|ref|ZP_10831474.1| hypothetical protein HMPREF1140_1672 [Lachnospiraceae bacterium
ICM7]
gi|400369008|gb|EJP22011.1| hypothetical protein HMPREF1140_1672 [Lachnospiraceae bacterium
ICM7]
Length = 420
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 120/206 (58%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++++SIM + D+W L+K++EKAGAD +E N SCP M MG GQ+P++V++
Sbjct: 104 VIVSSIMGA-SDDEWAVLAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
+S K+P K+TPN+ N+ A+AA EG A G++AINTV + +L + P V
Sbjct: 162 EVASASTKLPIIAKMTPNLGNMEIPARAAIEGGAKGIAAINTVKSITNLDINLRTGMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G SG A +P+ L+ +S + + PI G+GGI++ L+F+ GA
Sbjct: 222 NGK--SAISGYSGAAVKPIALRFISDLMHDPIVSKVPITGMGGIETWRDCLEFLMLGASN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I+G+ +
Sbjct: 280 LQVTTAVMQYGYRIVEDMISGISHYM 305
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I ++D++G AV + +LD +++ I+ + C+ CG+CY++C D+ +QAI + +
Sbjct: 310 INKLQDIVGTAVGNIVGADDLDRSYKILVQIDKEKCVGCGRCYVSCFDAAHQAIEYDYAS 369
Query: 548 HQAHVT-DECTGCTLCLSI 565
+ D+C GC LCL++
Sbjct: 370 RVPTINEDKCVGCHLCLNV 388
>gi|415778183|ref|ZP_11489229.1| uncharacterized protein yeiA [Escherichia coli 3431]
gi|425312076|ref|ZP_18701278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1735]
gi|425348779|ref|ZP_18735278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1849]
gi|429015248|ref|ZP_19082169.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0943]
gi|315615386|gb|EFU96018.1| uncharacterized protein yeiA [Escherichia coli 3431]
gi|408227644|gb|EKI51226.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1735]
gi|408265646|gb|EKI86328.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1849]
gi|427262224|gb|EKW28125.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0943]
Length = 399
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 91 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 148
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 149 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 208
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 209 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 266
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 267 LQVTTGIMQYGYRIVEDMASGLSHYL 292
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 299 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 358
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 359 PHCNTEKCVGCLLC 372
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 355 LKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHL 414
+KFPNPF L+S+P M +A++ GWG V KT + VSPR HL
Sbjct: 1 MKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF------DHL 52
Query: 415 YGPEQG--SFLNIELISE 430
+ G F N+E I+E
Sbjct: 53 VKEDTGFIGFKNMEQIAE 70
>gi|307311274|ref|ZP_07590918.1| dihydroorotate dehydrogenase family protein [Escherichia coli W]
gi|378712402|ref|YP_005277295.1| dihydroorotate dehydrogenase family protein [Escherichia coli
KO11FL]
gi|386609539|ref|YP_006125025.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli W]
gi|386700867|ref|YP_006164704.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli KO11FL]
gi|386710021|ref|YP_006173742.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli W]
gi|306908780|gb|EFN39277.1| dihydroorotate dehydrogenase family protein [Escherichia coli W]
gi|315061456|gb|ADT75783.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli W]
gi|323377963|gb|ADX50231.1| dihydroorotate dehydrogenase family protein [Escherichia coli
KO11FL]
gi|383392394|gb|AFH17352.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli KO11FL]
gi|383405713|gb|AFH11956.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli W]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ C +KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCSVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|301024363|ref|ZP_07188052.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 196-1]
gi|432564400|ref|ZP_19800983.1| dihydroorotate dehydrogenase [Escherichia coli KTE51]
gi|299880460|gb|EFI88671.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 196-1]
gi|431093328|gb|ELD98994.1| dihydroorotate dehydrogenase [Escherichia coli KTE51]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGSVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|417122195|ref|ZP_11971453.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0246]
gi|386147475|gb|EIG93915.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0246]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|387612724|ref|YP_006115840.1| putative oxidoreductase, 4Fe-4S binding subunit [Escherichia coli
ETEC H10407]
gi|309702460|emb|CBJ01786.1| putative oxidoreductase, 4Fe-4S binding subunit [Escherichia coli
ETEC H10407]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAERGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GW V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWDGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|417145880|ref|ZP_11986838.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2264]
gi|386163332|gb|EIH25127.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2264]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|385799346|ref|YP_005835750.1| dihydroorotate oxidase B, catalytic subunit [Halanaerobium
praevalens DSM 2228]
gi|309388710|gb|ADO76590.1| dihydroorotate oxidase B, catalytic subunit [Halanaerobium
praevalens DSM 2228]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIM N+ +W EL++ +AGAD +E N SCP M MG GQ+PE+V+ S
Sbjct: 103 IIIASIM-GENEKEWAELAEMVTEAGADLIECNFSCPQ-MTSGAMGSDVGQNPELVKKYS 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V +P K+TPNI N+ A AA G AD +SAINT+ L + D P P V
Sbjct: 161 AAVSQVTDLPVIAKMTPNIGNMEIPAIAAVNGGADALSAINTIKSLTEIDLDDFTPMPKV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ + + + P+ G+GGI++ + A +F+ G
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIAELKQHPQLKDVPLSGMGGIETWEDAAEFLALGCRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
+Q+ ++V + +V+D I GL L + +G+D + + A + D+
Sbjct: 279 LQMTTSVMQYGYRIVEDLINGLSHYL-----EEQGFDNLEQMVGLALEQIVAAEELDRAH 333
Query: 802 KAIPNFGE 809
+P F E
Sbjct: 334 LILPEFDE 341
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
+++ ++G A++++ ELD ++ ++++CI CG+CY++C D G+QA+ + E +
Sbjct: 311 NLEQMVGLALEQIVAAEELDRAHLILPEFDEELCIGCGRCYISCYDGGHQALEWDSENRK 370
Query: 550 AHV-TDECTGCTLCLSI 565
+ D+C GC LC +
Sbjct: 371 PDLDEDQCVGCHLCQQV 387
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P + M +A E+GWG V KT + SPR
Sbjct: 5 DLSIEFCGVKAENPFFLSSSPVGSNYDMCAKALESGWGGIVFKTIGYY--IADECSPR-- 60
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLN 466
F N++ E T+F+ F + I + K + ENL T +KKL
Sbjct: 61 ---------------FDNLK--KEATSFVGFKNMEQISD----KPLAENLAT---IKKLK 96
Query: 467 SD 468
D
Sbjct: 97 QD 98
>gi|218695758|ref|YP_002403425.1| dihydropyrimidine dehydrogenase [Escherichia coli 55989]
gi|218352490|emb|CAU98267.1| putative oxidoreductase subunit [Escherichia coli 55989]
Length = 401
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 93 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 150
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 151 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 210
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 211 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 268
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 269 LQVTTGIMQYGYRIVEDMASGLSHYL 294
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 301 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 360
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 361 PHCNTEKCVGCLLC 374
>gi|194431438|ref|ZP_03063730.1| dihydroorotate dehydrogenase family protein [Shigella dysenteriae
1012]
gi|417672548|ref|ZP_12322014.1| hypothetical protein SD15574_2140 [Shigella dysenteriae 155-74]
gi|420346082|ref|ZP_14847507.1| dihydroorotate dehydrogenase family domain protein [Shigella boydii
965-58]
gi|194420263|gb|EDX36340.1| dihydroorotate dehydrogenase family protein [Shigella dysenteriae
1012]
gi|332092632|gb|EGI97703.1| hypothetical protein SD15574_2140 [Shigella dysenteriae 155-74]
gi|391274802|gb|EIQ33602.1| dihydroorotate dehydrogenase family domain protein [Shigella boydii
965-58]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|421775773|ref|ZP_16212381.1| dihydropyrimidine dehydrogenase [Escherichia coli AD30]
gi|408459242|gb|EKJ83025.1| dihydropyrimidine dehydrogenase [Escherichia coli AD30]
Length = 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEKT 432
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEHA 84
>gi|293415430|ref|ZP_06658073.1| yeiA protein [Escherichia coli B185]
gi|291433078|gb|EFF06057.1| yeiA protein [Escherichia coli B185]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKIRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|222156903|ref|YP_002557042.1| hypothetical protein LF82_3007 [Escherichia coli LF82]
gi|387617507|ref|YP_006120529.1| dihydropyrimidine dehydrogenase [Escherichia coli O83:H1 str. NRG
857C]
gi|419040294|ref|ZP_13587322.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2E]
gi|419914403|ref|ZP_14432801.1| dihydropyrimidine dehydrogenase [Escherichia coli KD1]
gi|422382277|ref|ZP_16462438.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 57-2]
gi|432554237|ref|ZP_19790960.1| dihydroorotate dehydrogenase [Escherichia coli KTE47]
gi|432732882|ref|ZP_19967715.1| dihydroorotate dehydrogenase [Escherichia coli KTE45]
gi|432759968|ref|ZP_19994462.1| dihydroorotate dehydrogenase [Escherichia coli KTE46]
gi|222033908|emb|CAP76649.1| Uncharacterized protein yeiA [Escherichia coli LF82]
gi|312946768|gb|ADR27595.1| dihydropyrimidine dehydrogenase [Escherichia coli O83:H1 str. NRG
857C]
gi|324006546|gb|EGB75765.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 57-2]
gi|377890334|gb|EHU54791.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2E]
gi|388386674|gb|EIL48314.1| dihydropyrimidine dehydrogenase [Escherichia coli KD1]
gi|431084042|gb|ELD90213.1| dihydroorotate dehydrogenase [Escherichia coli KTE47]
gi|431276069|gb|ELF67096.1| dihydroorotate dehydrogenase [Escherichia coli KTE45]
gi|431307622|gb|ELF95912.1| dihydroorotate dehydrogenase [Escherichia coli KTE46]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|224537012|ref|ZP_03677551.1| hypothetical protein BACCELL_01888 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521379|gb|EEF90484.1| hypothetical protein BACCELL_01888 [Bacteroides cellulosilyticus
DSM 14838]
Length = 494
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 9/217 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIM N D+W L++ E+AGAD +E N SCP M ++G+G GQD +++ +
Sbjct: 200 VIIASIM-GRNCDEWTVLARMAEEAGADLIECNFSCPQ-MAKQGLGSDIGQDQDLIALYT 257
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R ++P K+TPNI N+ A A A+ ++AINTV + ++ + + +P +
Sbjct: 258 RATRKGSRLPIIAKMTPNIGNMELPAMTAIANGANSLAAINTVKSITRINTENFSSYPDI 317
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGIGGIDSADVALQFIQAGAHA 741
G + + GG SG A +P+ L+ + +A P P+ GIGGI + AL FI G A
Sbjct: 318 GGQ--SAVGGYSGQAVKPIALRFIRDLASYPPLKGIPLFGIGGITTWQDALDFILLGCTA 375
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWD 778
+Q+C++V + ++D GL +Y+K + D
Sbjct: 376 LQVCTSVMEYGYRIIDHLKEGLS--IYMKQHDIASLD 410
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I S+ ++ G A+ + +LD ++++ I+ CI+CG+CY++C D G+QAI + T
Sbjct: 406 IASLDELRGLALPNLVQPEQLDRERKLHCEIDSRRCIHCGRCYISCLDGGHQAIGWEKRT 465
Query: 548 HQAHVTDECTGCTLC 562
C GC LC
Sbjct: 466 PMID-KSLCVGCGLC 479
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
Y A +V + C D A D I +Y+ + N++
Sbjct: 48 YLRSAENVSCLHC--DDAKCEKACARGRVDSPIRIQEICRYVSQMENISRESTQ------ 99
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
++SV CG++ NPF LAS+P ++ M AF+ GW KT S +
Sbjct: 100 -----AELSVNFCGIRCENPFFLASSPVASSFEMCCHAFDAGWAGVSYKTISFYQS--RE 152
Query: 401 VSPRI 405
VSPR
Sbjct: 153 VSPRF 157
>gi|90111398|ref|NP_416652.4| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli str. K-12 substr. MG1655]
gi|157161627|ref|YP_001458945.1| dihydropyrimidine dehydrogenase [Escherichia coli HS]
gi|161367574|ref|NP_288730.2| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EDL933]
gi|161986503|ref|YP_311088.2| dihydropyrimidine dehydrogenase [Shigella sonnei Ss046]
gi|162139776|ref|NP_311066.2| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
Sakai]
gi|168750527|ref|ZP_02775549.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4113]
gi|168757729|ref|ZP_02782736.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4401]
gi|168763803|ref|ZP_02788810.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4501]
gi|168767760|ref|ZP_02792767.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4486]
gi|168773142|ref|ZP_02798149.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4196]
gi|168779990|ref|ZP_02804997.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4076]
gi|168788957|ref|ZP_02813964.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC869]
gi|168801164|ref|ZP_02826171.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC508]
gi|170081770|ref|YP_001731090.1| dihydropyrimidine dehydrogenase [Escherichia coli str. K-12 substr.
DH10B]
gi|188496096|ref|ZP_03003366.1| dihydroorotate dehydrogenase family protein [Escherichia coli
53638]
gi|193062277|ref|ZP_03043372.1| dihydroorotate dehydrogenase family protein [Escherichia coli E22]
gi|193071085|ref|ZP_03052011.1| dihydroorotate dehydrogenase family protein [Escherichia coli
E110019]
gi|194427185|ref|ZP_03059736.1| dihydroorotate dehydrogenase family protein [Escherichia coli B171]
gi|194436016|ref|ZP_03068118.1| dihydroorotate dehydrogenase family protein [Escherichia coli
101-1]
gi|195935523|ref|ZP_03080905.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC4024]
gi|208807187|ref|ZP_03249524.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4206]
gi|208814189|ref|ZP_03255518.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4045]
gi|208819511|ref|ZP_03259831.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4042]
gi|209396337|ref|YP_002271556.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC4115]
gi|217327385|ref|ZP_03443468.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. TW14588]
gi|238901329|ref|YP_002927125.1| dihydropyrimidine dehydrogenase [Escherichia coli BW2952]
gi|251785516|ref|YP_002999820.1| NADH-dependent dihydropyrimidine dehydrogenase subunit, subunit of
NAD-dependent dihydropyrimidine dehydrogenase
[Escherichia coli BL21(DE3)]
gi|253772926|ref|YP_003035757.1| dihydropyrimidine dehydrogenase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162161|ref|YP_003045269.1| dihydropyrimidine dehydrogenase [Escherichia coli B str. REL606]
gi|254288923|ref|YP_003054671.1| dihydropyrimidine dehydrogenase [Escherichia coli BL21(DE3)]
gi|254794046|ref|YP_003078883.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
TW14359]
gi|260844753|ref|YP_003222531.1| oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|261223394|ref|ZP_05937675.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK2000]
gi|261259056|ref|ZP_05951589.1| putative oxidoreductase [Escherichia coli O157:H7 str. FRIK966]
gi|291283401|ref|YP_003500219.1| oxidoreductase [Escherichia coli O55:H7 str. CB9615]
gi|297517340|ref|ZP_06935726.1| dihydropyrimidine dehydrogenase [Escherichia coli OP50]
gi|300930376|ref|ZP_07145785.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 187-1]
gi|300950094|ref|ZP_07164041.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 116-1]
gi|300955831|ref|ZP_07168172.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 175-1]
gi|301644164|ref|ZP_07244172.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 146-1]
gi|312973604|ref|ZP_07787776.1| uncharacterized protein yeiA [Escherichia coli 1827-70]
gi|331642772|ref|ZP_08343907.1| putative oxidoreductase [Escherichia coli H736]
gi|331683824|ref|ZP_08384420.1| putative oxidoreductase [Escherichia coli H299]
gi|383179107|ref|YP_005457112.1| dihydropyrimidine dehydrogenase subunit B [Shigella sonnei 53G]
gi|386281218|ref|ZP_10058880.1| dihydroorotate dehydrogenase [Escherichia sp. 4_1_40B]
gi|386595070|ref|YP_006091470.1| dihydroorotate dehydrogenase family protein [Escherichia coli DH1]
gi|386614756|ref|YP_006134422.1| hypothetical protein UMNK88_2691 [Escherichia coli UMNK88]
gi|387507537|ref|YP_006159793.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. RM12579]
gi|387621857|ref|YP_006129484.1| putative oxidoreductase [Escherichia coli DH1]
gi|387883370|ref|YP_006313672.1| dihydropyrimidine dehydrogenase [Escherichia coli Xuzhou21]
gi|388478196|ref|YP_490386.1| oxidoreductase [Escherichia coli str. K-12 substr. W3110]
gi|404375498|ref|ZP_10980682.1| dihydroorotate dehydrogenase [Escherichia sp. 1_1_43]
gi|414576742|ref|ZP_11433924.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3233-85]
gi|415798023|ref|ZP_11498334.1| hypothetical protein ECE128010_2020 [Escherichia coli E128010]
gi|415844601|ref|ZP_11524343.1| hypothetical protein SS53G_1042 [Shigella sonnei 53G]
gi|416310819|ref|ZP_11656554.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1044]
gi|416318283|ref|ZP_11660993.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC1212]
gi|416330488|ref|ZP_11669438.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1125]
gi|416775383|ref|ZP_11874273.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. G5101]
gi|416787066|ref|ZP_11879183.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. 493-89]
gi|416798682|ref|ZP_11884100.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. H 2687]
gi|416809097|ref|ZP_11888784.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. 3256-97]
gi|416819564|ref|ZP_11893342.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. USDA 5905]
gi|416830490|ref|ZP_11898630.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. LSU-61]
gi|417174084|ref|ZP_12003880.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2608]
gi|417182465|ref|ZP_12009022.1| dihydropyrimidine dehydrogenase [Escherichia coli 93.0624]
gi|417231502|ref|ZP_12032900.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0959]
gi|417253637|ref|ZP_12045393.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0967]
gi|417259769|ref|ZP_12047292.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.3916]
gi|417272944|ref|ZP_12060293.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.4168]
gi|417276622|ref|ZP_12063949.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2303]
gi|417292307|ref|ZP_12079588.1| dihydropyrimidine dehydrogenase [Escherichia coli B41]
gi|417613609|ref|ZP_12264067.1| hypothetical protein ECSTECEH250_2667 [Escherichia coli STEC_EH250]
gi|417618740|ref|ZP_12269154.1| hypothetical protein ECG581_2546 [Escherichia coli G58-1]
gi|417624039|ref|ZP_12274338.1| hypothetical protein ECSTECH18_2793 [Escherichia coli STEC_H.1.8]
gi|417635073|ref|ZP_12285286.1| hypothetical protein ECSTECS1191_2993 [Escherichia coli STEC_S1191]
gi|417944618|ref|ZP_12587859.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH140A]
gi|417976939|ref|ZP_12617728.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH001]
gi|418266502|ref|ZP_12886008.1| dihydroorotase dehydrogenase family protein [Shigella sonnei str.
Moseley]
gi|418303515|ref|ZP_12915309.1| uncharacterized protein yeiA [Escherichia coli UMNF18]
gi|418957493|ref|ZP_13509417.1| putative protein yeiA [Escherichia coli J53]
gi|419046588|ref|ZP_13593525.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3A]
gi|419051860|ref|ZP_13598732.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3B]
gi|419057888|ref|ZP_13604694.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3C]
gi|419063357|ref|ZP_13610085.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3D]
gi|419070252|ref|ZP_13615876.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3E]
gi|419076192|ref|ZP_13621711.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3F]
gi|419081351|ref|ZP_13626799.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4A]
gi|419087121|ref|ZP_13632479.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4B]
gi|419093096|ref|ZP_13638382.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4C]
gi|419098836|ref|ZP_13644036.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4D]
gi|419104709|ref|ZP_13649838.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4E]
gi|419110165|ref|ZP_13655224.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4F]
gi|419115466|ref|ZP_13660485.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5A]
gi|419121109|ref|ZP_13666067.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5B]
gi|419126604|ref|ZP_13671490.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5C]
gi|419132161|ref|ZP_13676999.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5D]
gi|419137194|ref|ZP_13681990.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC5E]
gi|419143072|ref|ZP_13687812.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6A]
gi|419149322|ref|ZP_13693975.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6B]
gi|419154524|ref|ZP_13699087.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6C]
gi|419159816|ref|ZP_13704321.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6D]
gi|419164944|ref|ZP_13709401.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6E]
gi|419175826|ref|ZP_13719664.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7B]
gi|419290089|ref|ZP_13832181.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11A]
gi|419295417|ref|ZP_13837463.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11B]
gi|419300877|ref|ZP_13842876.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11C]
gi|419307007|ref|ZP_13848907.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11D]
gi|419312015|ref|ZP_13853877.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11E]
gi|419317425|ref|ZP_13859228.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12A]
gi|419323597|ref|ZP_13865290.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12B]
gi|419329561|ref|ZP_13871165.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12C]
gi|419335126|ref|ZP_13876659.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12D]
gi|419340597|ref|ZP_13882061.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12E]
gi|419809259|ref|ZP_14334145.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O32:H37
str. P4]
gi|419870520|ref|ZP_14392613.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O103:H2
str. CVM9450]
gi|419938799|ref|ZP_14455610.1| dihydropyrimidine dehydrogenase [Escherichia coli 75]
gi|420270840|ref|ZP_14773198.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA22]
gi|420276165|ref|ZP_14778449.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA40]
gi|420281503|ref|ZP_14783741.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW06591]
gi|420287634|ref|ZP_14789825.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10246]
gi|420293100|ref|ZP_14795223.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW11039]
gi|420304804|ref|ZP_14806800.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10119]
gi|420310695|ref|ZP_14812628.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1738]
gi|420316072|ref|ZP_14817948.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1734]
gi|420359209|ref|ZP_14860183.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3226-85]
gi|420363817|ref|ZP_14864701.1| dihydroorotase dehydrogenase family protein [Shigella sonnei
4822-66]
gi|420391873|ref|ZP_14891126.1| dihydroorotase dehydrogenase family protein [Escherichia coli EPEC
C342-62]
gi|421813065|ref|ZP_16248789.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0416]
gi|421818954|ref|ZP_16254452.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0821]
gi|421824777|ref|ZP_16260144.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK920]
gi|421831677|ref|ZP_16266964.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA7]
gi|422762387|ref|ZP_16816144.1| dihydroorotate dehydrogenase [Escherichia coli E1167]
gi|422766756|ref|ZP_16820483.1| dihydroorotate dehydrogenase [Escherichia coli E1520]
gi|422772005|ref|ZP_16825694.1| dihydroorotate dehydrogenase [Escherichia coli E482]
gi|422786767|ref|ZP_16839506.1| dihydroorotate dehydrogenase [Escherichia coli H489]
gi|422790599|ref|ZP_16843303.1| dihydroorotate dehydrogenase [Escherichia coli TA007]
gi|422819676|ref|ZP_16867887.1| dihydroorotate dehydrogenase [Escherichia coli M919]
gi|423704470|ref|ZP_17678895.1| dihydroorotate dehydrogenase [Escherichia coli H730]
gi|423725739|ref|ZP_17699849.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA31]
gi|424078179|ref|ZP_17815183.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA505]
gi|424084634|ref|ZP_17821144.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA517]
gi|424091119|ref|ZP_17827064.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1996]
gi|424097690|ref|ZP_17833027.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1985]
gi|424103892|ref|ZP_17838691.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1990]
gi|424110594|ref|ZP_17844852.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93-001]
gi|424116485|ref|ZP_17850349.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA3]
gi|424122700|ref|ZP_17856048.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA5]
gi|424128836|ref|ZP_17861760.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA9]
gi|424135090|ref|ZP_17867576.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA10]
gi|424141689|ref|ZP_17873602.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA14]
gi|424148121|ref|ZP_17879519.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA15]
gi|424153996|ref|ZP_17884972.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA24]
gi|424247821|ref|ZP_17890456.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA25]
gi|424324356|ref|ZP_17896377.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA28]
gi|424450381|ref|ZP_17902106.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA32]
gi|424456579|ref|ZP_17907741.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA33]
gi|424462965|ref|ZP_17913445.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA39]
gi|424469328|ref|ZP_17919174.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA41]
gi|424475868|ref|ZP_17925211.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA42]
gi|424481623|ref|ZP_17930622.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW07945]
gi|424487768|ref|ZP_17936356.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09098]
gi|424494356|ref|ZP_17942133.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09195]
gi|424501138|ref|ZP_17948062.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4203]
gi|424507372|ref|ZP_17953802.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4196]
gi|424514695|ref|ZP_17959412.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW14313]
gi|424526854|ref|ZP_17970588.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4421]
gi|424533014|ref|ZP_17976379.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4422]
gi|424539079|ref|ZP_17982048.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4013]
gi|424545098|ref|ZP_17987547.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4402]
gi|424551353|ref|ZP_17993237.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4439]
gi|424557538|ref|ZP_17998975.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4436]
gi|424563883|ref|ZP_18004903.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4437]
gi|424570011|ref|ZP_18010596.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4448]
gi|424576175|ref|ZP_18016278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1845]
gi|424582018|ref|ZP_18021687.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1863]
gi|425098737|ref|ZP_18501489.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4870]
gi|425104866|ref|ZP_18507195.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5.2239]
gi|425110767|ref|ZP_18512703.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 6.0172]
gi|425115556|ref|ZP_18517358.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0566]
gi|425120283|ref|ZP_18521982.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0569]
gi|425126666|ref|ZP_18527862.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0586]
gi|425132481|ref|ZP_18533345.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.2524]
gi|425138950|ref|ZP_18539356.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0833]
gi|425144814|ref|ZP_18544823.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0869]
gi|425150858|ref|ZP_18550492.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.0221]
gi|425156741|ref|ZP_18556022.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA34]
gi|425163179|ref|ZP_18562074.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA506]
gi|425168843|ref|ZP_18567342.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA507]
gi|425174978|ref|ZP_18573108.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA504]
gi|425181009|ref|ZP_18578715.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1999]
gi|425187272|ref|ZP_18584555.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1997]
gi|425194044|ref|ZP_18590827.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE1487]
gi|425200477|ref|ZP_18596707.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE037]
gi|425206901|ref|ZP_18602713.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK2001]
gi|425212592|ref|ZP_18608013.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA4]
gi|425218706|ref|ZP_18613697.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA23]
gi|425225234|ref|ZP_18619735.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA49]
gi|425231598|ref|ZP_18625647.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA45]
gi|425237514|ref|ZP_18631244.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TT12B]
gi|425243737|ref|ZP_18637057.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli MA6]
gi|425249857|ref|ZP_18642808.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5905]
gi|425255717|ref|ZP_18648252.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli CB7326]
gi|425261935|ref|ZP_18653965.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC96038]
gi|425267970|ref|ZP_18659614.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5412]
gi|425273314|ref|ZP_18664726.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW15901]
gi|425283855|ref|ZP_18674894.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW00353]
gi|425289150|ref|ZP_18679998.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3006]
gi|425295406|ref|ZP_18685626.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA38]
gi|425318022|ref|ZP_18706832.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1736]
gi|425324121|ref|ZP_18712511.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1737]
gi|425330406|ref|ZP_18718295.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1846]
gi|425336570|ref|ZP_18723977.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1847]
gi|425342978|ref|ZP_18729895.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1848]
gi|425355074|ref|ZP_18741164.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1850]
gi|425361034|ref|ZP_18746707.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1856]
gi|425367205|ref|ZP_18752403.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1862]
gi|425373580|ref|ZP_18758246.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1864]
gi|425386426|ref|ZP_18770006.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1866]
gi|425393149|ref|ZP_18776279.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1868]
gi|425399248|ref|ZP_18781978.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1869]
gi|425405326|ref|ZP_18787582.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1870]
gi|425411730|ref|ZP_18793521.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE098]
gi|425418061|ref|ZP_18799355.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK523]
gi|425422965|ref|ZP_18804133.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1288]
gi|425429391|ref|ZP_18810017.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1304]
gi|428947761|ref|ZP_19020067.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1467]
gi|428953863|ref|ZP_19025678.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1042]
gi|428959797|ref|ZP_19031131.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 89.0511]
gi|428966366|ref|ZP_19037144.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0091]
gi|428972274|ref|ZP_19042636.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0039]
gi|428978725|ref|ZP_19048569.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.2281]
gi|428984540|ref|ZP_19053952.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0055]
gi|428990621|ref|ZP_19059628.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0056]
gi|428996421|ref|ZP_19065050.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 94.0618]
gi|429002660|ref|ZP_19070821.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0183]
gi|429008802|ref|ZP_19076346.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.1288]
gi|429021274|ref|ZP_19087813.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0428]
gi|429027210|ref|ZP_19093243.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0427]
gi|429033419|ref|ZP_19098961.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0939]
gi|429039518|ref|ZP_19104651.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0932]
gi|429045445|ref|ZP_19110176.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0107]
gi|429050816|ref|ZP_19115394.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0003]
gi|429056147|ref|ZP_19120500.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.1742]
gi|429061692|ref|ZP_19125731.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0007]
gi|429068000|ref|ZP_19131484.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0672]
gi|429073901|ref|ZP_19137165.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0678]
gi|429079099|ref|ZP_19142246.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0713]
gi|429827100|ref|ZP_19358178.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0109]
gi|429833427|ref|ZP_19363825.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0010]
gi|432370322|ref|ZP_19613409.1| dihydroorotate dehydrogenase [Escherichia coli KTE10]
gi|432417618|ref|ZP_19660223.1| dihydroorotate dehydrogenase [Escherichia coli KTE44]
gi|432450311|ref|ZP_19692576.1| dihydroorotate dehydrogenase [Escherichia coli KTE193]
gi|432485954|ref|ZP_19727870.1| dihydroorotate dehydrogenase [Escherichia coli KTE212]
gi|432526924|ref|ZP_19764018.1| dihydroorotate dehydrogenase [Escherichia coli KTE233]
gi|432534420|ref|ZP_19771396.1| dihydroorotate dehydrogenase [Escherichia coli KTE234]
gi|432576425|ref|ZP_19812886.1| dihydroorotate dehydrogenase [Escherichia coli KTE56]
gi|432627798|ref|ZP_19863775.1| dihydroorotate dehydrogenase [Escherichia coli KTE77]
gi|432637393|ref|ZP_19873264.1| dihydroorotate dehydrogenase [Escherichia coli KTE81]
gi|432661380|ref|ZP_19897026.1| dihydroorotate dehydrogenase [Escherichia coli KTE111]
gi|432671219|ref|ZP_19906749.1| dihydroorotate dehydrogenase [Escherichia coli KTE119]
gi|432675266|ref|ZP_19910726.1| dihydroorotate dehydrogenase [Escherichia coli KTE142]
gi|432685979|ref|ZP_19921277.1| dihydroorotate dehydrogenase [Escherichia coli KTE156]
gi|432692120|ref|ZP_19927349.1| dihydroorotate dehydrogenase [Escherichia coli KTE161]
gi|432704937|ref|ZP_19940039.1| dihydroorotate dehydrogenase [Escherichia coli KTE171]
gi|432737661|ref|ZP_19972420.1| dihydroorotate dehydrogenase [Escherichia coli KTE42]
gi|432875674|ref|ZP_20093947.1| dihydroorotate dehydrogenase [Escherichia coli KTE154]
gi|432948028|ref|ZP_20143184.1| dihydroorotate dehydrogenase [Escherichia coli KTE196]
gi|432955604|ref|ZP_20147544.1| dihydroorotate dehydrogenase [Escherichia coli KTE197]
gi|433033990|ref|ZP_20221706.1| dihydroorotate dehydrogenase [Escherichia coli KTE112]
gi|433043730|ref|ZP_20231226.1| dihydroorotate dehydrogenase [Escherichia coli KTE117]
gi|433048525|ref|ZP_20235879.1| dihydroorotate dehydrogenase [Escherichia coli KTE120]
gi|433174069|ref|ZP_20358595.1| dihydroorotate dehydrogenase [Escherichia coli KTE232]
gi|442592254|ref|ZP_21010234.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442600047|ref|ZP_21017747.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|444925688|ref|ZP_21245004.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 09BKT078844]
gi|444931392|ref|ZP_21250449.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0814]
gi|444936801|ref|ZP_21255596.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0815]
gi|444942429|ref|ZP_21260965.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0816]
gi|444953498|ref|ZP_21271609.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0848]
gi|444958971|ref|ZP_21276840.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1753]
gi|444964147|ref|ZP_21281779.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1775]
gi|444975380|ref|ZP_21292526.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1805]
gi|444980852|ref|ZP_21297771.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli ATCC 700728]
gi|444986202|ref|ZP_21302995.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA11]
gi|444991518|ref|ZP_21308174.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA19]
gi|444996809|ref|ZP_21313320.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA13]
gi|445002365|ref|ZP_21318765.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA2]
gi|445007865|ref|ZP_21324118.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA47]
gi|445012897|ref|ZP_21329015.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA48]
gi|445018773|ref|ZP_21334749.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA8]
gi|445024285|ref|ZP_21340120.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 7.1982]
gi|445029558|ref|ZP_21345246.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1781]
gi|445035018|ref|ZP_21350560.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1762]
gi|445040644|ref|ZP_21356033.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA35]
gi|445045841|ref|ZP_21361105.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4880]
gi|445051414|ref|ZP_21366479.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0083]
gi|445057174|ref|ZP_21372044.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0670]
gi|450190516|ref|ZP_21890875.1| dihydropyrimidine dehydrogenase [Escherichia coli SEPT362]
gi|450245461|ref|ZP_21900641.1| dihydropyrimidine dehydrogenase [Escherichia coli S17]
gi|452971353|ref|ZP_21969580.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. EC4009]
gi|3183568|sp|P25889.3|PREA_ECOLI RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|85675261|dbj|BAE76624.1| predicted oxidoreductase [Escherichia coli str. K12 substr. W3110]
gi|87082059|gb|AAC75208.2| dihydropyrimidine dehydrogenase, NADH-dependent, subunit C
[Escherichia coli str. K-12 substr. MG1655]
gi|157067307|gb|ABV06562.1| dihydroorotate dehydrogenase family protein [Escherichia coli HS]
gi|169889605|gb|ACB03312.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
gi|187771295|gb|EDU35139.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4196]
gi|188015281|gb|EDU53403.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4113]
gi|188491295|gb|EDU66398.1| dihydroorotate dehydrogenase family protein [Escherichia coli
53638]
gi|189001874|gb|EDU70860.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4076]
gi|189355322|gb|EDU73741.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4401]
gi|189362895|gb|EDU81314.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4486]
gi|189366084|gb|EDU84500.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4501]
gi|189371361|gb|EDU89777.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC869]
gi|189376637|gb|EDU95053.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC508]
gi|192931943|gb|EDV84542.1| dihydroorotate dehydrogenase family protein [Escherichia coli E22]
gi|192955608|gb|EDV86085.1| dihydroorotate dehydrogenase family protein [Escherichia coli
E110019]
gi|194414806|gb|EDX31077.1| dihydroorotate dehydrogenase family protein [Escherichia coli B171]
gi|194424744|gb|EDX40729.1| dihydroorotate dehydrogenase family protein [Escherichia coli
101-1]
gi|208726988|gb|EDZ76589.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4206]
gi|208735466|gb|EDZ84153.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4045]
gi|208739634|gb|EDZ87316.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4042]
gi|209157737|gb|ACI35170.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4115]
gi|217319752|gb|EEC28177.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. TW14588]
gi|238862745|gb|ACR64743.1| predicted oxidoreductase [Escherichia coli BW2952]
gi|242377789|emb|CAQ32552.1| NADH-dependent dihydropyrimidine dehydrogenase subunit, subunit of
NAD-dependent dihydropyrimidine dehydrogenase
[Escherichia coli BL21(DE3)]
gi|253323970|gb|ACT28572.1| dihydroorotate dehydrogenase family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974062|gb|ACT39733.1| dihydropyrimidine dehydrogenase [Escherichia coli B str. REL606]
gi|253978230|gb|ACT43900.1| dihydropyrimidine dehydrogenase [Escherichia coli BL21(DE3)]
gi|254593446|gb|ACT72807.1| predicted oxidoreductase [Escherichia coli O157:H7 str. TW14359]
gi|257759900|dbj|BAI31397.1| predicted oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|260448759|gb|ACX39181.1| dihydroorotate dehydrogenase family protein [Escherichia coli DH1]
gi|290763274|gb|ADD57235.1| putative oxidoreductase [Escherichia coli O55:H7 str. CB9615]
gi|300317298|gb|EFJ67082.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 175-1]
gi|300450584|gb|EFK14204.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 116-1]
gi|300461698|gb|EFK25191.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 187-1]
gi|301077462|gb|EFK92268.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 146-1]
gi|310332199|gb|EFP99434.1| uncharacterized protein yeiA [Escherichia coli 1827-70]
gi|315136780|dbj|BAJ43939.1| putative oxidoreductase [Escherichia coli DH1]
gi|320192230|gb|EFW66875.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC1212]
gi|320641218|gb|EFX10696.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. G5101]
gi|320646606|gb|EFX15517.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. 493-89]
gi|320651861|gb|EFX20236.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. H 2687]
gi|320657585|gb|EFX25383.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320663191|gb|EFX30500.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. USDA 5905]
gi|320667942|gb|EFX34845.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. LSU-61]
gi|323161774|gb|EFZ47655.1| hypothetical protein ECE128010_2020 [Escherichia coli E128010]
gi|323168713|gb|EFZ54393.1| hypothetical protein SS53G_1042 [Shigella sonnei 53G]
gi|323936761|gb|EGB33046.1| dihydroorotate dehydrogenase [Escherichia coli E1520]
gi|323940784|gb|EGB36972.1| dihydroorotate dehydrogenase [Escherichia coli E482]
gi|323961611|gb|EGB57217.1| dihydroorotate dehydrogenase [Escherichia coli H489]
gi|323972971|gb|EGB68168.1| dihydroorotate dehydrogenase [Escherichia coli TA007]
gi|324118013|gb|EGC11912.1| dihydroorotate dehydrogenase [Escherichia coli E1167]
gi|326339497|gb|EGD63308.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1125]
gi|326343958|gb|EGD67719.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1044]
gi|331039570|gb|EGI11790.1| putative oxidoreductase [Escherichia coli H736]
gi|331078776|gb|EGI49978.1| putative oxidoreductase [Escherichia coli H299]
gi|332343925|gb|AEE57259.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|339415613|gb|AEJ57285.1| uncharacterized protein yeiA [Escherichia coli UMNF18]
gi|342363662|gb|EGU27768.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH140A]
gi|344193406|gb|EGV47487.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH001]
gi|345361803|gb|EGW93960.1| hypothetical protein ECSTECEH250_2667 [Escherichia coli STEC_EH250]
gi|345375454|gb|EGX07401.1| hypothetical protein ECG581_2546 [Escherichia coli G58-1]
gi|345377000|gb|EGX08932.1| hypothetical protein ECSTECH18_2793 [Escherichia coli STEC_H.1.8]
gi|345387356|gb|EGX17178.1| hypothetical protein ECSTECS1191_2993 [Escherichia coli STEC_S1191]
gi|359332494|dbj|BAL38941.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. MDS42]
gi|374359531|gb|AEZ41238.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. RM12579]
gi|377893418|gb|EHU57857.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3A]
gi|377893545|gb|EHU57979.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3B]
gi|377905158|gb|EHU69432.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3C]
gi|377909832|gb|EHU74030.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3D]
gi|377912462|gb|EHU76621.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3E]
gi|377921549|gb|EHU85545.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3F]
gi|377925981|gb|EHU89916.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4A]
gi|377930649|gb|EHU94529.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4B]
gi|377942235|gb|EHV05970.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4C]
gi|377942689|gb|EHV06422.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4D]
gi|377947192|gb|EHV10859.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4E]
gi|377957443|gb|EHV20975.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4F]
gi|377961261|gb|EHV24735.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5A]
gi|377967050|gb|EHV30457.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5B]
gi|377975069|gb|EHV38391.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5C]
gi|377975728|gb|EHV39045.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5D]
gi|377984187|gb|EHV47422.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC5E]
gi|377992444|gb|EHV55591.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6B]
gi|377994355|gb|EHV57482.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6A]
gi|377997106|gb|EHV60213.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6C]
gi|378007160|gb|EHV70129.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6D]
gi|378011026|gb|EHV73971.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6E]
gi|378033229|gb|EHV95809.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7B]
gi|378129890|gb|EHW91260.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11A]
gi|378142504|gb|EHX03706.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11B]
gi|378148994|gb|EHX10127.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11D]
gi|378150493|gb|EHX11608.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11C]
gi|378157643|gb|EHX18674.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11E]
gi|378164673|gb|EHX25614.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12B]
gi|378169008|gb|EHX29908.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12A]
gi|378169877|gb|EHX30763.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12C]
gi|378182205|gb|EHX42858.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12D]
gi|378187508|gb|EHX48119.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12E]
gi|384380140|gb|EIE38007.1| putative protein yeiA [Escherichia coli J53]
gi|385158189|gb|EIF20179.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O32:H37
str. P4]
gi|385536778|gb|EIF83664.1| dihydroorotate dehydrogenase [Escherichia coli M919]
gi|385706387|gb|EIG43428.1| dihydroorotate dehydrogenase [Escherichia coli H730]
gi|386121357|gb|EIG69972.1| dihydroorotate dehydrogenase [Escherichia sp. 4_1_40B]
gi|386176776|gb|EIH54255.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2608]
gi|386184318|gb|EIH67057.1| dihydropyrimidine dehydrogenase [Escherichia coli 93.0624]
gi|386204501|gb|EII09012.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0959]
gi|386215564|gb|EII32056.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0967]
gi|386226492|gb|EII48794.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.3916]
gi|386236644|gb|EII68620.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.4168]
gi|386240557|gb|EII77480.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2303]
gi|386254629|gb|EIJ04319.1| dihydropyrimidine dehydrogenase [Escherichia coli B41]
gi|386796828|gb|AFJ29862.1| dihydropyrimidine dehydrogenase [Escherichia coli Xuzhou21]
gi|388339321|gb|EIL05706.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O103:H2
str. CVM9450]
gi|388409334|gb|EIL69630.1| dihydropyrimidine dehydrogenase [Escherichia coli 75]
gi|390641658|gb|EIN21082.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1996]
gi|390643115|gb|EIN22478.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA517]
gi|390644145|gb|EIN23438.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA505]
gi|390660809|gb|EIN38499.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93-001]
gi|390662377|gb|EIN39981.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1985]
gi|390664114|gb|EIN41576.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1990]
gi|390677917|gb|EIN53917.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA3]
gi|390681130|gb|EIN56934.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA5]
gi|390683816|gb|EIN59468.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA9]
gi|390697038|gb|EIN71472.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA10]
gi|390701080|gb|EIN75335.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA15]
gi|390701790|gb|EIN76008.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA14]
gi|390714352|gb|EIN87266.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA22]
gi|390723137|gb|EIN95757.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA25]
gi|390724632|gb|EIN97181.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA24]
gi|390727899|gb|EIO00282.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA28]
gi|390743076|gb|EIO14063.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA31]
gi|390743364|gb|EIO14341.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA32]
gi|390745832|gb|EIO16612.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA33]
gi|390757575|gb|EIO27045.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA40]
gi|390767774|gb|EIO36840.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA41]
gi|390769115|gb|EIO38067.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA39]
gi|390769563|gb|EIO38490.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA42]
gi|390781790|gb|EIO49467.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW06591]
gi|390790391|gb|EIO57819.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10246]
gi|390791436|gb|EIO58827.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW07945]
gi|390797186|gb|EIO64442.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW11039]
gi|390806545|gb|EIO73448.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09098]
gi|390815826|gb|EIO82338.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10119]
gi|390826200|gb|EIO92056.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4203]
gi|390830871|gb|EIO96358.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09195]
gi|390831589|gb|EIO96957.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4196]
gi|390847472|gb|EIP11014.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW14313]
gi|390850922|gb|EIP14263.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4421]
gi|390861620|gb|EIP23864.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4422]
gi|390865822|gb|EIP27816.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4013]
gi|390871125|gb|EIP32567.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4402]
gi|390878901|gb|EIP39711.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4439]
gi|390883913|gb|EIP44302.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4436]
gi|390893927|gb|EIP53461.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4437]
gi|390896174|gb|EIP55565.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4448]
gi|390899974|gb|EIP59210.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1738]
gi|390908062|gb|EIP66903.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1734]
gi|390919523|gb|EIP77872.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1863]
gi|390920492|gb|EIP78760.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1845]
gi|391281890|gb|EIQ40527.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3226-85]
gi|391284495|gb|EIQ43090.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3233-85]
gi|391294061|gb|EIQ52314.1| dihydroorotase dehydrogenase family protein [Shigella sonnei
4822-66]
gi|391312554|gb|EIQ70162.1| dihydroorotase dehydrogenase family protein [Escherichia coli EPEC
C342-62]
gi|397899732|gb|EJL16104.1| dihydroorotase dehydrogenase family protein [Shigella sonnei str.
Moseley]
gi|404290980|gb|EJZ47878.1| dihydroorotate dehydrogenase [Escherichia sp. 1_1_43]
gi|408064049|gb|EKG98531.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA7]
gi|408067829|gb|EKH02257.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK920]
gi|408071125|gb|EKH05478.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA34]
gi|408078767|gb|EKH12895.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA506]
gi|408083075|gb|EKH16993.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA507]
gi|408091336|gb|EKH24567.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA504]
gi|408097449|gb|EKH30340.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1999]
gi|408104154|gb|EKH36476.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1997]
gi|408108385|gb|EKH40388.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE1487]
gi|408115105|gb|EKH46571.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE037]
gi|408121218|gb|EKH52179.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK2001]
gi|408127763|gb|EKH58200.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA4]
gi|408138727|gb|EKH68383.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA23]
gi|408140404|gb|EKH69920.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA49]
gi|408145999|gb|EKH75142.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA45]
gi|408155355|gb|EKH83678.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TT12B]
gi|408160016|gb|EKH88060.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli MA6]
gi|408164024|gb|EKH91864.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5905]
gi|408173490|gb|EKI00510.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli CB7326]
gi|408180602|gb|EKI07207.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC96038]
gi|408183031|gb|EKI09505.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5412]
gi|408193096|gb|EKI18649.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW15901]
gi|408201545|gb|EKI26694.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW00353]
gi|408213702|gb|EKI38181.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3006]
gi|408217964|gb|EKI42198.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA38]
gi|408238681|gb|EKI61467.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1736]
gi|408243090|gb|EKI65634.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1737]
gi|408247468|gb|EKI69668.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1846]
gi|408256551|gb|EKI77926.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1847]
gi|408259253|gb|EKI80440.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1848]
gi|408275085|gb|EKI95067.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1850]
gi|408277230|gb|EKI97040.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1856]
gi|408287065|gb|EKJ05961.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1862]
gi|408291233|gb|EKJ09867.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1864]
gi|408308278|gb|EKJ25548.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1868]
gi|408308433|gb|EKJ25702.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1866]
gi|408319443|gb|EKJ35579.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1869]
gi|408326178|gb|EKJ42002.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1870]
gi|408326827|gb|EKJ42596.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE098]
gi|408336886|gb|EKJ51634.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK523]
gi|408343520|gb|EKJ57914.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1288]
gi|408346644|gb|EKJ60930.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1304]
gi|408550016|gb|EKK27361.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5.2239]
gi|408550778|gb|EKK28094.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4870]
gi|408551336|gb|EKK28617.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 6.0172]
gi|408568236|gb|EKK44269.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0566]
gi|408569325|gb|EKK45322.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0569]
gi|408570191|gb|EKK46171.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0586]
gi|408579848|gb|EKK55296.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0833]
gi|408581486|gb|EKK56821.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.2524]
gi|408591535|gb|EKK65956.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0869]
gi|408596581|gb|EKK70706.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.0221]
gi|408601371|gb|EKK75174.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0416]
gi|408612711|gb|EKK86045.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0821]
gi|427205012|gb|EKV75272.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1042]
gi|427207386|gb|EKV77555.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 89.0511]
gi|427208620|gb|EKV78709.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1467]
gi|427222183|gb|EKV90975.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0091]
gi|427224699|gb|EKV93398.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.2281]
gi|427228016|gb|EKV96500.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0039]
gi|427242249|gb|EKW09664.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0056]
gi|427242842|gb|EKW10239.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0055]
gi|427246402|gb|EKW13616.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 94.0618]
gi|427261658|gb|EKW27575.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0183]
gi|427264980|gb|EKW30607.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.1288]
gi|427276836|gb|EKW41401.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0428]
gi|427279613|gb|EKW44024.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0427]
gi|427283381|gb|EKW47589.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0939]
gi|427292143|gb|EKW55499.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0932]
gi|427299537|gb|EKW62508.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0107]
gi|427300742|gb|EKW63667.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0003]
gi|427313630|gb|EKW75728.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.1742]
gi|427315978|gb|EKW77952.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0007]
gi|427319690|gb|EKW81493.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0672]
gi|427328507|gb|EKW89869.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0678]
gi|427329429|gb|EKW90755.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0713]
gi|429254174|gb|EKY38614.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0109]
gi|429255899|gb|EKY40180.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0010]
gi|430884988|gb|ELC07918.1| dihydroorotate dehydrogenase [Escherichia coli KTE10]
gi|430939131|gb|ELC59348.1| dihydroorotate dehydrogenase [Escherichia coli KTE44]
gi|430979701|gb|ELC96466.1| dihydroorotate dehydrogenase [Escherichia coli KTE193]
gi|431016351|gb|ELD29898.1| dihydroorotate dehydrogenase [Escherichia coli KTE212]
gi|431060647|gb|ELD69973.1| dihydroorotate dehydrogenase [Escherichia coli KTE234]
gi|431063582|gb|ELD72821.1| dihydroorotate dehydrogenase [Escherichia coli KTE233]
gi|431115344|gb|ELE18868.1| dihydroorotate dehydrogenase [Escherichia coli KTE56]
gi|431163167|gb|ELE63603.1| dihydroorotate dehydrogenase [Escherichia coli KTE77]
gi|431171288|gb|ELE71467.1| dihydroorotate dehydrogenase [Escherichia coli KTE81]
gi|431200496|gb|ELE99222.1| dihydroorotate dehydrogenase [Escherichia coli KTE111]
gi|431210534|gb|ELF08589.1| dihydroorotate dehydrogenase [Escherichia coli KTE119]
gi|431214242|gb|ELF12067.1| dihydroorotate dehydrogenase [Escherichia coli KTE142]
gi|431222152|gb|ELF19443.1| dihydroorotate dehydrogenase [Escherichia coli KTE156]
gi|431226914|gb|ELF24064.1| dihydroorotate dehydrogenase [Escherichia coli KTE161]
gi|431243166|gb|ELF37555.1| dihydroorotate dehydrogenase [Escherichia coli KTE171]
gi|431282554|gb|ELF73434.1| dihydroorotate dehydrogenase [Escherichia coli KTE42]
gi|431420620|gb|ELH02904.1| dihydroorotate dehydrogenase [Escherichia coli KTE154]
gi|431458006|gb|ELH38343.1| dihydroorotate dehydrogenase [Escherichia coli KTE196]
gi|431468275|gb|ELH48281.1| dihydroorotate dehydrogenase [Escherichia coli KTE197]
gi|431550996|gb|ELI24983.1| dihydroorotate dehydrogenase [Escherichia coli KTE112]
gi|431556051|gb|ELI29886.1| dihydroorotate dehydrogenase [Escherichia coli KTE117]
gi|431564668|gb|ELI37837.1| dihydroorotate dehydrogenase [Escherichia coli KTE120]
gi|431692157|gb|ELJ57596.1| dihydroorotate dehydrogenase [Escherichia coli KTE232]
gi|441608407|emb|CCP99260.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441651100|emb|CCQ03237.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|444538629|gb|ELV18476.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0814]
gi|444540120|gb|ELV19819.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 09BKT078844]
gi|444547779|gb|ELV26336.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0815]
gi|444558842|gb|ELV36103.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0816]
gi|444563812|gb|ELV40788.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0848]
gi|444573490|gb|ELV49855.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1753]
gi|444577963|gb|ELV54056.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1775]
gi|444593647|gb|ELV68854.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli ATCC 700728]
gi|444593907|gb|ELV69111.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA11]
gi|444596157|gb|ELV71240.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1805]
gi|444607365|gb|ELV81943.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA13]
gi|444607672|gb|ELV82240.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA19]
gi|444616224|gb|ELV90392.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA2]
gi|444624129|gb|ELV98034.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA47]
gi|444624539|gb|ELV98421.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA48]
gi|444630169|gb|ELW03834.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA8]
gi|444638989|gb|ELW12310.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 7.1982]
gi|444641893|gb|ELW15109.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1781]
gi|444645522|gb|ELW18584.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1762]
gi|444654719|gb|ELW27366.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA35]
gi|444660138|gb|ELW32511.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4880]
gi|444665141|gb|ELW37284.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0083]
gi|444669923|gb|ELW41857.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0670]
gi|449320351|gb|EMD10384.1| dihydropyrimidine dehydrogenase [Escherichia coli S17]
gi|449320494|gb|EMD10525.1| dihydropyrimidine dehydrogenase [Escherichia coli SEPT362]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|415813257|ref|ZP_11505066.1| hypothetical protein ECLT68_3438 [Escherichia coli LT-68]
gi|323171798|gb|EFZ57442.1| hypothetical protein ECLT68_3438 [Escherichia coli LT-68]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+ + CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLLITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|218705675|ref|YP_002413194.1| dihydropyrimidine dehydrogenase [Escherichia coli UMN026]
gi|293405615|ref|ZP_06649607.1| yeiA protein [Escherichia coli FVEC1412]
gi|298381296|ref|ZP_06990895.1| yeiA protein [Escherichia coli FVEC1302]
gi|300897797|ref|ZP_07116190.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 198-1]
gi|331663649|ref|ZP_08364559.1| putative oxidoreductase [Escherichia coli TA143]
gi|417587141|ref|ZP_12237912.1| hypothetical protein ECSTECC16502_2778 [Escherichia coli
STEC_C165-02]
gi|419932787|ref|ZP_14450072.1| dihydropyrimidine dehydrogenase [Escherichia coli 576-1]
gi|432354087|ref|ZP_19597360.1| dihydroorotate dehydrogenase [Escherichia coli KTE2]
gi|432402439|ref|ZP_19645191.1| dihydroorotate dehydrogenase [Escherichia coli KTE26]
gi|432426703|ref|ZP_19669204.1| dihydroorotate dehydrogenase [Escherichia coli KTE181]
gi|432461169|ref|ZP_19703318.1| dihydroorotate dehydrogenase [Escherichia coli KTE204]
gi|432476376|ref|ZP_19718375.1| dihydroorotate dehydrogenase [Escherichia coli KTE208]
gi|432489824|ref|ZP_19731698.1| dihydroorotate dehydrogenase [Escherichia coli KTE213]
gi|432518218|ref|ZP_19755406.1| dihydroorotate dehydrogenase [Escherichia coli KTE228]
gi|432538339|ref|ZP_19775241.1| dihydroorotate dehydrogenase [Escherichia coli KTE235]
gi|432631934|ref|ZP_19867860.1| dihydroorotate dehydrogenase [Escherichia coli KTE80]
gi|432641648|ref|ZP_19877482.1| dihydroorotate dehydrogenase [Escherichia coli KTE83]
gi|432666543|ref|ZP_19902124.1| dihydroorotate dehydrogenase [Escherichia coli KTE116]
gi|432775232|ref|ZP_20009511.1| dihydroorotate dehydrogenase [Escherichia coli KTE54]
gi|432839832|ref|ZP_20073318.1| dihydroorotate dehydrogenase [Escherichia coli KTE140]
gi|432887129|ref|ZP_20101203.1| dihydroorotate dehydrogenase [Escherichia coli KTE158]
gi|432913327|ref|ZP_20119024.1| dihydroorotate dehydrogenase [Escherichia coli KTE190]
gi|433019216|ref|ZP_20207437.1| dihydroorotate dehydrogenase [Escherichia coli KTE105]
gi|433053756|ref|ZP_20240936.1| dihydroorotate dehydrogenase [Escherichia coli KTE122]
gi|433068461|ref|ZP_20255251.1| dihydroorotate dehydrogenase [Escherichia coli KTE128]
gi|433159190|ref|ZP_20344028.1| dihydroorotate dehydrogenase [Escherichia coli KTE177]
gi|433179003|ref|ZP_20363403.1| dihydroorotate dehydrogenase [Escherichia coli KTE82]
gi|433203765|ref|ZP_20387541.1| dihydroorotate dehydrogenase [Escherichia coli KTE95]
gi|218432772|emb|CAR13666.1| putative oxidoreductase subunit [Escherichia coli UMN026]
gi|291427823|gb|EFF00850.1| yeiA protein [Escherichia coli FVEC1412]
gi|298278738|gb|EFI20252.1| yeiA protein [Escherichia coli FVEC1302]
gi|300358512|gb|EFJ74382.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 198-1]
gi|331059448|gb|EGI31425.1| putative oxidoreductase [Escherichia coli TA143]
gi|345336769|gb|EGW69203.1| hypothetical protein ECSTECC16502_2778 [Escherichia coli
STEC_C165-02]
gi|388415730|gb|EIL75650.1| dihydropyrimidine dehydrogenase [Escherichia coli 576-1]
gi|430875260|gb|ELB98802.1| dihydroorotate dehydrogenase [Escherichia coli KTE2]
gi|430924910|gb|ELC45583.1| dihydroorotate dehydrogenase [Escherichia coli KTE26]
gi|430955635|gb|ELC74417.1| dihydroorotate dehydrogenase [Escherichia coli KTE181]
gi|430988859|gb|ELD05328.1| dihydroorotate dehydrogenase [Escherichia coli KTE204]
gi|431005544|gb|ELD20565.1| dihydroorotate dehydrogenase [Escherichia coli KTE208]
gi|431020441|gb|ELD33786.1| dihydroorotate dehydrogenase [Escherichia coli KTE213]
gi|431050840|gb|ELD60516.1| dihydroorotate dehydrogenase [Escherichia coli KTE228]
gi|431069228|gb|ELD77557.1| dihydroorotate dehydrogenase [Escherichia coli KTE235]
gi|431170134|gb|ELE70328.1| dihydroorotate dehydrogenase [Escherichia coli KTE80]
gi|431181531|gb|ELE81393.1| dihydroorotate dehydrogenase [Escherichia coli KTE83]
gi|431200837|gb|ELE99555.1| dihydroorotate dehydrogenase [Escherichia coli KTE116]
gi|431318271|gb|ELG06037.1| dihydroorotate dehydrogenase [Escherichia coli KTE54]
gi|431389005|gb|ELG72720.1| dihydroorotate dehydrogenase [Escherichia coli KTE140]
gi|431416127|gb|ELG98614.1| dihydroorotate dehydrogenase [Escherichia coli KTE158]
gi|431439627|gb|ELH20960.1| dihydroorotate dehydrogenase [Escherichia coli KTE190]
gi|431531117|gb|ELI07786.1| dihydroorotate dehydrogenase [Escherichia coli KTE105]
gi|431570156|gb|ELI43082.1| dihydroorotate dehydrogenase [Escherichia coli KTE122]
gi|431584088|gb|ELI56075.1| dihydroorotate dehydrogenase [Escherichia coli KTE128]
gi|431677829|gb|ELJ43842.1| dihydroorotate dehydrogenase [Escherichia coli KTE177]
gi|431701368|gb|ELJ66287.1| dihydroorotate dehydrogenase [Escherichia coli KTE82]
gi|431721314|gb|ELJ85309.1| dihydroorotate dehydrogenase [Escherichia coli KTE95]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|415829157|ref|ZP_11515540.1| hypothetical protein ECOK1357_2501 [Escherichia coli OK1357]
gi|323184230|gb|EFZ69607.1| hypothetical protein ECOK1357_2501 [Escherichia coli OK1357]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR V
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRFV 62
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 63 ------HLVKEDTGFIGFKNMEQIAE 82
>gi|209919605|ref|YP_002293689.1| dihydropyrimidine dehydrogenase [Escherichia coli SE11]
gi|260856120|ref|YP_003230011.1| dihydropyrimidine dehydrogenase [Escherichia coli O26:H11 str.
11368]
gi|260868849|ref|YP_003235251.1| putative oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|300822593|ref|ZP_07102731.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 119-7]
gi|300902204|ref|ZP_07120204.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 84-1]
gi|301306535|ref|ZP_07212599.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 124-1]
gi|309793025|ref|ZP_07687453.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 145-7]
gi|331668846|ref|ZP_08369694.1| putative oxidoreductase [Escherichia coli TA271]
gi|331678095|ref|ZP_08378770.1| putative oxidoreductase [Escherichia coli H591]
gi|407470039|ref|YP_006783518.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407481298|ref|YP_006778447.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2011C-3493]
gi|410481845|ref|YP_006769391.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2050]
gi|415793524|ref|ZP_11496141.1| hypothetical protein ECEPECA14_5793 [Escherichia coli EPECa14]
gi|415823002|ref|ZP_11511521.1| hypothetical protein ECOK1180_4323 [Escherichia coli OK1180]
gi|415863774|ref|ZP_11536978.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 85-1]
gi|417155432|ref|ZP_11993561.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.0497]
gi|417159553|ref|ZP_11996581.1| dihydropyrimidine dehydrogenase [Escherichia coli 99.0741]
gi|417192228|ref|ZP_12014328.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0522]
gi|417213639|ref|ZP_12022680.1| dihydropyrimidine dehydrogenase [Escherichia coli JB1-95]
gi|417223515|ref|ZP_12026955.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.154]
gi|417237840|ref|ZP_12035571.1| dihydropyrimidine dehydrogenase [Escherichia coli 9.0111]
gi|417269706|ref|ZP_12057066.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.3884]
gi|417298322|ref|ZP_12085561.1| dihydropyrimidine dehydrogenase [Escherichia coli 900105 (10e)]
gi|417581658|ref|ZP_12232460.1| hypothetical protein ECSTECB2F1_2322 [Escherichia coli STEC_B2F1]
gi|417592403|ref|ZP_12243100.1| hypothetical protein EC253486_3010 [Escherichia coli 2534-86]
gi|417597461|ref|ZP_12248103.1| hypothetical protein EC30301_2599 [Escherichia coli 3030-1]
gi|417602739|ref|ZP_12253309.1| hypothetical protein ECSTEC94C_2536 [Escherichia coli STEC_94C]
gi|417608776|ref|ZP_12259279.1| hypothetical protein ECSTECDG1313_3176 [Escherichia coli
STEC_DG131-3]
gi|417639880|ref|ZP_12290023.1| hypothetical protein ECTX1999_2588 [Escherichia coli TX1999]
gi|417667566|ref|ZP_12317111.1| hypothetical protein ECSTECO31_2375 [Escherichia coli STEC_O31]
gi|417805712|ref|ZP_12452661.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. LB226692]
gi|417833455|ref|ZP_12479903.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 01-09591]
gi|417863527|ref|ZP_12508575.1| hypothetical protein C22711_0460 [Escherichia coli O104:H4 str.
C227-11]
gi|418945192|ref|ZP_13498095.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O157:H43 str. T22]
gi|419170802|ref|ZP_13714688.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7A]
gi|419181441|ref|ZP_13725055.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7C]
gi|419186886|ref|ZP_13730400.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7D]
gi|419197605|ref|ZP_13740993.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC8A]
gi|419204156|ref|ZP_13747339.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8B]
gi|419210299|ref|ZP_13753379.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8C]
gi|419216195|ref|ZP_13759197.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8D]
gi|419222133|ref|ZP_13765056.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8E]
gi|419227334|ref|ZP_13770192.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9A]
gi|419233002|ref|ZP_13775779.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9B]
gi|419238398|ref|ZP_13781119.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9C]
gi|419243865|ref|ZP_13786504.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9D]
gi|419249691|ref|ZP_13792275.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9E]
gi|419255507|ref|ZP_13798026.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10A]
gi|419261707|ref|ZP_13804129.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10B]
gi|419267648|ref|ZP_13810003.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10C]
gi|419273238|ref|ZP_13815537.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10D]
gi|419278603|ref|ZP_13820852.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10E]
gi|419284748|ref|ZP_13826924.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10F]
gi|419381391|ref|ZP_13922342.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14C]
gi|419386697|ref|ZP_13927575.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14D]
gi|419392241|ref|ZP_13933053.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15A]
gi|419397281|ref|ZP_13938049.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15B]
gi|419402623|ref|ZP_13943347.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15C]
gi|419407742|ref|ZP_13948431.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15D]
gi|419413325|ref|ZP_13953977.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15E]
gi|419803766|ref|ZP_14328933.1| dihydropyrimidine dehydrogenase [Escherichia coli AI27]
gi|419862638|ref|ZP_14385232.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O103:H25 str. CVM9340]
gi|419875156|ref|ZP_14397036.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9534]
gi|419885224|ref|ZP_14406012.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9545]
gi|419886823|ref|ZP_14407447.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9570]
gi|419895740|ref|ZP_14415525.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9574]
gi|419902384|ref|ZP_14421610.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9942]
gi|419906519|ref|ZP_14425420.1| putative oxidoreductase [Escherichia coli O26:H11 str. CVM10026]
gi|419950453|ref|ZP_14466666.1| dihydropyrimidine dehydrogenase [Escherichia coli CUMT8]
gi|420089808|ref|ZP_14601588.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9602]
gi|420095669|ref|ZP_14607149.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9634]
gi|420104266|ref|ZP_14614991.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9455]
gi|420106402|ref|ZP_14616812.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9553]
gi|420117943|ref|ZP_14627287.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10021]
gi|420121046|ref|ZP_14630189.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10030]
gi|420128136|ref|ZP_14636697.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10224]
gi|420133233|ref|ZP_14641491.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9952]
gi|420386193|ref|ZP_14885544.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli EPECa12]
gi|422351289|ref|ZP_16432111.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 117-3]
gi|422777440|ref|ZP_16831092.1| dihydroorotate dehydrogenase [Escherichia coli H120]
gi|422988273|ref|ZP_16979046.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C227-11]
gi|422995164|ref|ZP_16985928.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C236-11]
gi|423000239|ref|ZP_16990993.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
09-7901]
gi|423003908|ref|ZP_16994654.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
04-8351]
gi|423010481|ref|ZP_17001215.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-3677]
gi|423019708|ref|ZP_17010417.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4404]
gi|423024875|ref|ZP_17015572.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4522]
gi|423030696|ref|ZP_17021384.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4623]
gi|423038522|ref|ZP_17029196.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423043641|ref|ZP_17034308.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423045370|ref|ZP_17036030.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423053909|ref|ZP_17042716.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423060884|ref|ZP_17049680.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423706194|ref|ZP_17680577.1| dihydroorotate dehydrogenase [Escherichia coli B799]
gi|424749023|ref|ZP_18177145.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CFSAN001629]
gi|424761517|ref|ZP_18189089.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424772588|ref|ZP_18199682.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CFSAN001632]
gi|425380180|ref|ZP_18764220.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1865]
gi|429719753|ref|ZP_19254684.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429771635|ref|ZP_19303658.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02030]
gi|429781567|ref|ZP_19313496.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429785307|ref|ZP_19317205.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02092]
gi|429791196|ref|ZP_19323053.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02093]
gi|429797023|ref|ZP_19328831.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02281]
gi|429798621|ref|ZP_19330422.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02318]
gi|429807134|ref|ZP_19338861.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02913]
gi|429812034|ref|ZP_19343720.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03439]
gi|429817554|ref|ZP_19349195.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-04080]
gi|429822765|ref|ZP_19354363.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03943]
gi|429904145|ref|ZP_19370124.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429908282|ref|ZP_19374246.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429914153|ref|ZP_19380101.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429919184|ref|ZP_19385116.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429925003|ref|ZP_19390917.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928940|ref|ZP_19394842.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429935479|ref|ZP_19401365.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429941159|ref|ZP_19407033.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429943839|ref|ZP_19409702.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429951439|ref|ZP_19417285.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954751|ref|ZP_19420583.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432377318|ref|ZP_19620309.1| dihydroorotate dehydrogenase [Escherichia coli KTE12]
gi|432481520|ref|ZP_19723477.1| dihydroorotate dehydrogenase [Escherichia coli KTE210]
gi|432765544|ref|ZP_19999982.1| dihydroorotate dehydrogenase [Escherichia coli KTE48]
gi|432832178|ref|ZP_20065752.1| dihydroorotate dehydrogenase [Escherichia coli KTE135]
gi|432835137|ref|ZP_20068676.1| dihydroorotate dehydrogenase [Escherichia coli KTE136]
gi|432968257|ref|ZP_20157172.1| dihydroorotate dehydrogenase [Escherichia coli KTE203]
gi|433092539|ref|ZP_20278806.1| dihydroorotate dehydrogenase [Escherichia coli KTE138]
gi|433130719|ref|ZP_20316155.1| dihydroorotate dehydrogenase [Escherichia coli KTE163]
gi|433135381|ref|ZP_20320726.1| dihydroorotate dehydrogenase [Escherichia coli KTE166]
gi|209912864|dbj|BAG77938.1| putative dihydropyrimidine dehydrogenase [Escherichia coli SE11]
gi|257754769|dbj|BAI26271.1| predicted oxidoreductase [Escherichia coli O26:H11 str. 11368]
gi|257765205|dbj|BAI36700.1| predicted oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|300405723|gb|EFJ89261.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 84-1]
gi|300524793|gb|EFK45862.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 119-7]
gi|300838236|gb|EFK65996.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 124-1]
gi|308123311|gb|EFO60573.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 145-7]
gi|315255341|gb|EFU35309.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 85-1]
gi|323152183|gb|EFZ38473.1| hypothetical protein ECEPECA14_5793 [Escherichia coli EPECa14]
gi|323176957|gb|EFZ62547.1| hypothetical protein ECOK1180_4323 [Escherichia coli OK1180]
gi|323944963|gb|EGB41028.1| dihydroorotate dehydrogenase [Escherichia coli H120]
gi|324020615|gb|EGB89834.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 117-3]
gi|331064040|gb|EGI35951.1| putative oxidoreductase [Escherichia coli TA271]
gi|331074555|gb|EGI45875.1| putative oxidoreductase [Escherichia coli H591]
gi|340734337|gb|EGR63467.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 01-09591]
gi|340739624|gb|EGR73856.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. LB226692]
gi|341916816|gb|EGT66433.1| hypothetical protein C22711_0460 [Escherichia coli O104:H4 str.
C227-11]
gi|345337429|gb|EGW69861.1| hypothetical protein ECSTECB2F1_2322 [Escherichia coli STEC_B2F1]
gi|345338740|gb|EGW71167.1| hypothetical protein EC253486_3010 [Escherichia coli 2534-86]
gi|345350405|gb|EGW82680.1| hypothetical protein ECSTEC94C_2536 [Escherichia coli STEC_94C]
gi|345353746|gb|EGW85975.1| hypothetical protein EC30301_2599 [Escherichia coli 3030-1]
gi|345357985|gb|EGW90173.1| hypothetical protein ECSTECDG1313_3176 [Escherichia coli
STEC_DG131-3]
gi|345393372|gb|EGX23148.1| hypothetical protein ECTX1999_2588 [Escherichia coli TX1999]
gi|354861999|gb|EHF22437.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C236-11]
gi|354867284|gb|EHF27706.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C227-11]
gi|354869355|gb|EHF29765.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
04-8351]
gi|354873210|gb|EHF33587.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
09-7901]
gi|354879964|gb|EHF40300.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-3677]
gi|354889388|gb|EHF49637.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4404]
gi|354892983|gb|EHF53187.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4522]
gi|354895120|gb|EHF55309.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354897394|gb|EHF57552.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4623]
gi|354898755|gb|EHF58906.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354912806|gb|EHF72804.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354915811|gb|EHF75787.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354917726|gb|EHF77688.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|375319492|gb|EHS65636.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O157:H43 str. T22]
gi|378014846|gb|EHV77743.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7A]
gi|378023689|gb|EHV86361.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7C]
gi|378028878|gb|EHV91494.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7D]
gi|378047137|gb|EHW09509.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC8A]
gi|378048876|gb|EHW11229.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8B]
gi|378054089|gb|EHW16375.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8C]
gi|378062679|gb|EHW24856.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8D]
gi|378065455|gb|EHW27600.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8E]
gi|378074847|gb|EHW36876.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9A]
gi|378077529|gb|EHW39523.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9B]
gi|378084298|gb|EHW46210.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9C]
gi|378090943|gb|EHW52778.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9D]
gi|378095276|gb|EHW57064.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9E]
gi|378100493|gb|EHW62189.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10A]
gi|378106756|gb|EHW68384.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10B]
gi|378111476|gb|EHW73060.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10C]
gi|378116695|gb|EHW78215.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10D]
gi|378128819|gb|EHW90200.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10E]
gi|378132002|gb|EHW93355.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10F]
gi|378227758|gb|EHX87926.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14C]
gi|378231224|gb|EHX91335.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14D]
gi|378237441|gb|EHX97464.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15A]
gi|378243402|gb|EHY03348.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15B]
gi|378247157|gb|EHY07076.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15C]
gi|378254121|gb|EHY13985.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15D]
gi|378258757|gb|EHY18573.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15E]
gi|384473165|gb|EIE57209.1| dihydropyrimidine dehydrogenase [Escherichia coli AI27]
gi|385712078|gb|EIG49033.1| dihydroorotate dehydrogenase [Escherichia coli B799]
gi|386168521|gb|EIH35037.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.0497]
gi|386175004|gb|EIH46996.1| dihydropyrimidine dehydrogenase [Escherichia coli 99.0741]
gi|386191110|gb|EIH79856.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0522]
gi|386194335|gb|EIH88591.1| dihydropyrimidine dehydrogenase [Escherichia coli JB1-95]
gi|386203317|gb|EII02308.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.154]
gi|386213618|gb|EII24043.1| dihydropyrimidine dehydrogenase [Escherichia coli 9.0111]
gi|386228511|gb|EII55867.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.3884]
gi|386258002|gb|EIJ13484.1| dihydropyrimidine dehydrogenase [Escherichia coli 900105 (10e)]
gi|388344778|gb|EIL10602.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O103:H25 str. CVM9340]
gi|388349525|gb|EIL15003.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9534]
gi|388350759|gb|EIL16085.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9545]
gi|388360061|gb|EIL24308.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9574]
gi|388364451|gb|EIL28302.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9570]
gi|388374112|gb|EIL37314.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9942]
gi|388379005|gb|EIL41697.1| putative oxidoreductase [Escherichia coli O26:H11 str. CVM10026]
gi|388416777|gb|EIL76653.1| dihydropyrimidine dehydrogenase [Escherichia coli CUMT8]
gi|391305260|gb|EIQ63051.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli EPECa12]
gi|394386319|gb|EJE63825.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10224]
gi|394387018|gb|EJE64488.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9602]
gi|394391777|gb|EJE68606.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9634]
gi|394401384|gb|EJE77197.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10021]
gi|394404625|gb|EJE79976.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9455]
gi|394416215|gb|EJE90022.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9553]
gi|394426376|gb|EJE99219.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9952]
gi|394427280|gb|EJE99995.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10030]
gi|397784712|gb|EJK95565.1| hypothetical protein ECSTECO31_2375 [Escherichia coli STEC_O31]
gi|406777007|gb|AFS56431.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407053595|gb|AFS73646.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2011C-3493]
gi|407066074|gb|AFS87121.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408296547|gb|EKJ14773.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1865]
gi|421938139|gb|EKT95726.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CFSAN001632]
gi|421943059|gb|EKU00357.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CFSAN001629]
gi|421943537|gb|EKU00820.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CFSAN001630]
gi|429346144|gb|EKY82925.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429348896|gb|EKY85652.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02092]
gi|429361118|gb|EKY97775.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02030]
gi|429362549|gb|EKY99196.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02093]
gi|429362820|gb|EKY99465.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02281]
gi|429365938|gb|EKZ02550.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02318]
gi|429376793|gb|EKZ13321.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02913]
gi|429379267|gb|EKZ15768.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03439]
gi|429380835|gb|EKZ17324.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03943]
gi|429393056|gb|EKZ29455.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-04080]
gi|429405157|gb|EKZ41423.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429406923|gb|EKZ43177.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429410671|gb|EKZ46892.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429414383|gb|EKZ50558.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429420992|gb|EKZ57114.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429429326|gb|EKZ65395.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429432013|gb|EKZ68053.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429436219|gb|EKZ72235.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429438424|gb|EKZ74417.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429448046|gb|EKZ83963.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429451764|gb|EKZ87652.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429457708|gb|EKZ93546.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|430898617|gb|ELC20750.1| dihydroorotate dehydrogenase [Escherichia coli KTE12]
gi|431006892|gb|ELD21861.1| dihydroorotate dehydrogenase [Escherichia coli KTE210]
gi|431309719|gb|ELF97912.1| dihydroorotate dehydrogenase [Escherichia coli KTE48]
gi|431376148|gb|ELG61471.1| dihydroorotate dehydrogenase [Escherichia coli KTE135]
gi|431385497|gb|ELG69484.1| dihydroorotate dehydrogenase [Escherichia coli KTE136]
gi|431471374|gb|ELH51267.1| dihydroorotate dehydrogenase [Escherichia coli KTE203]
gi|431609869|gb|ELI79174.1| dihydroorotate dehydrogenase [Escherichia coli KTE138]
gi|431645952|gb|ELJ13492.1| dihydroorotate dehydrogenase [Escherichia coli KTE163]
gi|431656368|gb|ELJ23354.1| dihydroorotate dehydrogenase [Escherichia coli KTE166]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|215487368|ref|YP_002329799.1| dihydropyrimidine dehydrogenase [Escherichia coli O127:H6 str.
E2348/69]
gi|312967440|ref|ZP_07781655.1| uncharacterized protein yeiA [Escherichia coli 2362-75]
gi|416335333|ref|ZP_11672026.1| dihydropyrimidine dehydrogenase [Escherichia coli WV_060327]
gi|417756400|ref|ZP_12404475.1| putative oxidoreductase [Escherichia coli DEC2B]
gi|418997418|ref|ZP_13545012.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1A]
gi|419008382|ref|ZP_13555813.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1C]
gi|419014063|ref|ZP_13561414.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC1D]
gi|419019066|ref|ZP_13566373.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1E]
gi|419024566|ref|ZP_13571792.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC2A]
gi|419029607|ref|ZP_13576770.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2C]
gi|419035216|ref|ZP_13582302.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2D]
gi|215265440|emb|CAS09841.1| predicted oxidoreductase [Escherichia coli O127:H6 str. E2348/69]
gi|312287637|gb|EFR15542.1| uncharacterized protein yeiA [Escherichia coli 2362-75]
gi|320196016|gb|EFW70640.1| dihydropyrimidine dehydrogenase [Escherichia coli WV_060327]
gi|377843245|gb|EHU08285.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1A]
gi|377843900|gb|EHU08937.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1C]
gi|377857401|gb|EHU22252.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC1D]
gi|377860120|gb|EHU24946.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1E]
gi|377863350|gb|EHU28155.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC2A]
gi|377873816|gb|EHU38447.1| putative oxidoreductase [Escherichia coli DEC2B]
gi|377877789|gb|EHU42378.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2C]
gi|377879572|gb|EHU44144.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2D]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRAHPELHDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|420298974|ref|ZP_14801023.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09109]
gi|390806669|gb|EIO73571.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09109]
Length = 380
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 72 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 129
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 130 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 189
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 190 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 247
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 248 LQVTTGIMQYGYRIVEDMASGLSHYL 273
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++ A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 280 SLQEMVDLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 339
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 340 PHCNTEKCVGCLLC 353
>gi|418041966|ref|ZP_12680177.1| dihydropyrimidine dehydrogenase [Escherichia coli W26]
gi|383475153|gb|EID67121.1| dihydropyrimidine dehydrogenase [Escherichia coli W26]
Length = 380
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 72 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 129
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 130 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 189
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 190 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 247
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 248 LQVTTGIMQYGYRIVEDMASGLSHYL 273
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 280 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 339
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 340 PHCNTEKCVGCLLC 353
>gi|417629391|ref|ZP_12279629.1| hypothetical protein ECSTECMHI813_2313 [Escherichia coli
STEC_MHI813]
gi|345373359|gb|EGX05320.1| hypothetical protein ECSTECMHI813_2313 [Escherichia coli
STEC_MHI813]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+ FPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVNFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|167748210|ref|ZP_02420337.1| hypothetical protein ANACAC_02954 [Anaerostipes caccae DSM 14662]
gi|167652202|gb|EDR96331.1| dihydropyrimidine dehydrogenase [Anaerostipes caccae DSM 14662]
Length = 431
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM + N+++W L+KK +AG D +E N SCP M MG GQ+P++VR
Sbjct: 117 VIVASIMGS-NEEEWEILAKKVTEAGVDMIECNFSCPQ-MTSSAMGSDVGQNPDLVRRYC 174
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V + +P K+TPNI N+ A AA EG A G++AINTV + ++ + P V
Sbjct: 175 EVVSGATHLPVIAKMTPNIGNMEIPAIAAMEGGAKGIAAINTVKAITNIDVENMTAMPVV 234
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ + + + PI GIGGI++ AL FI G+
Sbjct: 235 NGK--SSISGYSGAAVKPIALRFITQMKQHPELKDVPITGIGGIETWKDALDFILVGSSN 292
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + +V+D I+GL +
Sbjct: 293 LQVTTSVMQYGYRIVEDMISGLSHFM 318
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I + D++G A+ + ++D + N D C+ CG+CY++C D G+QAIT+ E
Sbjct: 323 IDKLSDLVGVALPNIVPADDIDRTFILYPDFNKDKCVGCGRCYVSCFDGGHQAITWDEEE 382
Query: 548 HQAHVT-DECTGCTLCLSI 565
+ + D+C GC LCL++
Sbjct: 383 RKPVLNEDKCVGCHLCLNV 401
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+K NPF L+S+P + M +A E GW KT + + SPR
Sbjct: 19 DLSIDFLGVKCENPFFLSSSPVGSNYEMCAKALEAGWAGVYYKTIGIF--IPNECSPRF- 75
Query: 407 KGTTSRHLYGPEQGSFLNIELISEK 431
TS+ G F N+E+IS+K
Sbjct: 76 -DITSKE--GTPWTGFKNMEMISDK 97
>gi|110642356|ref|YP_670086.1| dihydropyrimidine dehydrogenase [Escherichia coli 536]
gi|117624348|ref|YP_853261.1| dihydropyrimidine dehydrogenase [Escherichia coli APEC O1]
gi|161486180|ref|NP_754568.2| dihydropyrimidine dehydrogenase [Escherichia coli CFT073]
gi|191170189|ref|ZP_03031743.1| dihydroorotate dehydrogenase family protein [Escherichia coli F11]
gi|218559065|ref|YP_002391978.1| dihydropyrimidine dehydrogenase [Escherichia coli S88]
gi|227887202|ref|ZP_04005007.1| dihydropyrimidine dehydrogenase [Escherichia coli 83972]
gi|300981478|ref|ZP_07175559.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 200-1]
gi|300982861|ref|ZP_07176325.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 45-1]
gi|301048883|ref|ZP_07195876.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 185-1]
gi|306814738|ref|ZP_07448900.1| dihydropyrimidine dehydrogenase [Escherichia coli NC101]
gi|331658226|ref|ZP_08359188.1| putative oxidoreductase [Escherichia coli TA206]
gi|386600025|ref|YP_006101531.1| dihydroorotate dehydrogenase family protein [Escherichia coli
IHE3034]
gi|386603828|ref|YP_006110128.1| dihydropyrimidine dehydrogenase [Escherichia coli UM146]
gi|386629937|ref|YP_006149657.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i2']
gi|386634857|ref|YP_006154576.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i14']
gi|386639724|ref|YP_006106522.1| dihydroorotate dehydrogenase family protein [Escherichia coli ABU
83972]
gi|416898181|ref|ZP_11927745.1| hypothetical protein ECSTEC7V_2552 [Escherichia coli STEC_7v]
gi|417085409|ref|ZP_11952837.1| dihydropyrimidine dehydrogenase [Escherichia coli cloneA_i1]
gi|417115509|ref|ZP_11966645.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2741]
gi|417286589|ref|ZP_12073878.1| dihydropyrimidine dehydrogenase [Escherichia coli TW07793]
gi|419700984|ref|ZP_14228586.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli SCI-07]
gi|419947078|ref|ZP_14463440.1| dihydropyrimidine dehydrogenase [Escherichia coli HM605]
gi|422360420|ref|ZP_16441054.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 110-3]
gi|422362782|ref|ZP_16443334.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 153-1]
gi|422370292|ref|ZP_16450686.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 16-3]
gi|422374735|ref|ZP_16455010.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 60-1]
gi|422749428|ref|ZP_16803340.1| dihydroorotate dehydrogenase [Escherichia coli H252]
gi|422755568|ref|ZP_16809392.1| dihydroorotate dehydrogenase [Escherichia coli H263]
gi|422799427|ref|ZP_16847926.1| dihydroorotate dehydrogenase [Escherichia coli M863]
gi|422804834|ref|ZP_16853266.1| dihydroorotate dehydrogenase [Escherichia fergusonii B253]
gi|422837797|ref|ZP_16885770.1| hypothetical protein ESPG_00456 [Escherichia coli H397]
gi|432358492|ref|ZP_19601718.1| dihydroorotate dehydrogenase [Escherichia coli KTE4]
gi|432363226|ref|ZP_19606393.1| dihydroorotate dehydrogenase [Escherichia coli KTE5]
gi|432381888|ref|ZP_19624831.1| dihydroorotate dehydrogenase [Escherichia coli KTE15]
gi|432387700|ref|ZP_19630589.1| dihydroorotate dehydrogenase [Escherichia coli KTE16]
gi|432412361|ref|ZP_19655024.1| dihydroorotate dehydrogenase [Escherichia coli KTE39]
gi|432432436|ref|ZP_19674865.1| dihydroorotate dehydrogenase [Escherichia coli KTE187]
gi|432436874|ref|ZP_19679262.1| dihydroorotate dehydrogenase [Escherichia coli KTE188]
gi|432457255|ref|ZP_19699439.1| dihydroorotate dehydrogenase [Escherichia coli KTE201]
gi|432466241|ref|ZP_19708330.1| dihydroorotate dehydrogenase [Escherichia coli KTE205]
gi|432471514|ref|ZP_19713560.1| dihydroorotate dehydrogenase [Escherichia coli KTE206]
gi|432496255|ref|ZP_19738051.1| dihydroorotate dehydrogenase [Escherichia coli KTE214]
gi|432504977|ref|ZP_19746701.1| dihydroorotate dehydrogenase [Escherichia coli KTE220]
gi|432514450|ref|ZP_19751674.1| dihydroorotate dehydrogenase [Escherichia coli KTE224]
gi|432524346|ref|ZP_19761474.1| dihydroorotate dehydrogenase [Escherichia coli KTE230]
gi|432569228|ref|ZP_19805740.1| dihydroorotate dehydrogenase [Escherichia coli KTE53]
gi|432574228|ref|ZP_19810708.1| dihydroorotate dehydrogenase [Escherichia coli KTE55]
gi|432584404|ref|ZP_19820798.1| dihydroorotate dehydrogenase [Escherichia coli KTE57]
gi|432588476|ref|ZP_19824832.1| dihydroorotate dehydrogenase [Escherichia coli KTE58]
gi|432593413|ref|ZP_19829730.1| dihydroorotate dehydrogenase [Escherichia coli KTE60]
gi|432598135|ref|ZP_19834411.1| dihydroorotate dehydrogenase [Escherichia coli KTE62]
gi|432608035|ref|ZP_19844220.1| dihydroorotate dehydrogenase [Escherichia coli KTE67]
gi|432611957|ref|ZP_19848119.1| dihydroorotate dehydrogenase [Escherichia coli KTE72]
gi|432646719|ref|ZP_19882509.1| dihydroorotate dehydrogenase [Escherichia coli KTE86]
gi|432651703|ref|ZP_19887457.1| dihydroorotate dehydrogenase [Escherichia coli KTE87]
gi|432656302|ref|ZP_19892006.1| dihydroorotate dehydrogenase [Escherichia coli KTE93]
gi|432699579|ref|ZP_19934733.1| dihydroorotate dehydrogenase [Escherichia coli KTE169]
gi|432713926|ref|ZP_19948966.1| dihydroorotate dehydrogenase [Escherichia coli KTE8]
gi|432746190|ref|ZP_19980856.1| dihydroorotate dehydrogenase [Escherichia coli KTE43]
gi|432754963|ref|ZP_19989513.1| dihydroorotate dehydrogenase [Escherichia coli KTE22]
gi|432779088|ref|ZP_20013331.1| dihydroorotate dehydrogenase [Escherichia coli KTE59]
gi|432784096|ref|ZP_20018275.1| dihydroorotate dehydrogenase [Escherichia coli KTE63]
gi|432788035|ref|ZP_20022167.1| dihydroorotate dehydrogenase [Escherichia coli KTE65]
gi|432802365|ref|ZP_20036344.1| dihydroorotate dehydrogenase [Escherichia coli KTE84]
gi|432821484|ref|ZP_20055176.1| dihydroorotate dehydrogenase [Escherichia coli KTE118]
gi|432827616|ref|ZP_20061268.1| dihydroorotate dehydrogenase [Escherichia coli KTE123]
gi|432845118|ref|ZP_20077951.1| dihydroorotate dehydrogenase [Escherichia coli KTE141]
gi|432899167|ref|ZP_20109859.1| dihydroorotate dehydrogenase [Escherichia coli KTE192]
gi|432905407|ref|ZP_20114274.1| dihydroorotate dehydrogenase [Escherichia coli KTE194]
gi|432938499|ref|ZP_20136777.1| dihydroorotate dehydrogenase [Escherichia coli KTE183]
gi|432972351|ref|ZP_20161218.1| dihydroorotate dehydrogenase [Escherichia coli KTE207]
gi|432974296|ref|ZP_20163135.1| dihydroorotate dehydrogenase [Escherichia coli KTE209]
gi|432985907|ref|ZP_20174630.1| dihydroorotate dehydrogenase [Escherichia coli KTE215]
gi|432995884|ref|ZP_20184489.1| dihydroorotate dehydrogenase [Escherichia coli KTE218]
gi|433000453|ref|ZP_20188978.1| dihydroorotate dehydrogenase [Escherichia coli KTE223]
gi|433005606|ref|ZP_20194035.1| dihydroorotate dehydrogenase [Escherichia coli KTE227]
gi|433008189|ref|ZP_20196606.1| dihydroorotate dehydrogenase [Escherichia coli KTE229]
gi|433029124|ref|ZP_20216983.1| dihydroorotate dehydrogenase [Escherichia coli KTE109]
gi|433039148|ref|ZP_20226747.1| dihydroorotate dehydrogenase [Escherichia coli KTE113]
gi|433058667|ref|ZP_20245713.1| dihydroorotate dehydrogenase [Escherichia coli KTE124]
gi|433073340|ref|ZP_20259995.1| dihydroorotate dehydrogenase [Escherichia coli KTE129]
gi|433078324|ref|ZP_20264862.1| dihydroorotate dehydrogenase [Escherichia coli KTE131]
gi|433083106|ref|ZP_20269563.1| dihydroorotate dehydrogenase [Escherichia coli KTE133]
gi|433087828|ref|ZP_20274199.1| dihydroorotate dehydrogenase [Escherichia coli KTE137]
gi|433101694|ref|ZP_20287780.1| dihydroorotate dehydrogenase [Escherichia coli KTE145]
gi|433116082|ref|ZP_20301873.1| dihydroorotate dehydrogenase [Escherichia coli KTE153]
gi|433120746|ref|ZP_20306418.1| dihydroorotate dehydrogenase [Escherichia coli KTE157]
gi|433125732|ref|ZP_20311291.1| dihydroorotate dehydrogenase [Escherichia coli KTE160]
gi|433139801|ref|ZP_20325057.1| dihydroorotate dehydrogenase [Escherichia coli KTE167]
gi|433144738|ref|ZP_20329882.1| dihydroorotate dehydrogenase [Escherichia coli KTE168]
gi|433149718|ref|ZP_20334739.1| dihydroorotate dehydrogenase [Escherichia coli KTE174]
gi|433154268|ref|ZP_20339211.1| dihydroorotate dehydrogenase [Escherichia coli KTE176]
gi|433164023|ref|ZP_20348761.1| dihydroorotate dehydrogenase [Escherichia coli KTE179]
gi|433169128|ref|ZP_20353756.1| dihydroorotate dehydrogenase [Escherichia coli KTE180]
gi|433183812|ref|ZP_20368063.1| dihydroorotate dehydrogenase [Escherichia coli KTE85]
gi|433188931|ref|ZP_20373029.1| dihydroorotate dehydrogenase [Escherichia coli KTE88]
gi|433208323|ref|ZP_20391997.1| dihydroorotate dehydrogenase [Escherichia coli KTE97]
gi|433213059|ref|ZP_20396649.1| dihydroorotate dehydrogenase [Escherichia coli KTE99]
gi|442607898|ref|ZP_21022658.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli Nissle
1917]
gi|110343948|gb|ABG70185.1| putative dihydropyrimidine dehydrogenase [Escherichia coli 536]
gi|115513472|gb|ABJ01547.1| putative dihydropyrimidine dehydrogenase [Escherichia coli APEC O1]
gi|190909705|gb|EDV69290.1| dihydroorotate dehydrogenase family protein [Escherichia coli F11]
gi|218365834|emb|CAR03575.1| putative oxidoreductase subunit [Escherichia coli S88]
gi|227835552|gb|EEJ46018.1| dihydropyrimidine dehydrogenase [Escherichia coli 83972]
gi|294490821|gb|ADE89577.1| dihydroorotate dehydrogenase family protein [Escherichia coli
IHE3034]
gi|300299259|gb|EFJ55644.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 185-1]
gi|300307551|gb|EFJ62071.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 200-1]
gi|300408661|gb|EFJ92199.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 45-1]
gi|305852132|gb|EFM52584.1| dihydropyrimidine dehydrogenase [Escherichia coli NC101]
gi|307554216|gb|ADN46991.1| dihydroorotate dehydrogenase family protein [Escherichia coli ABU
83972]
gi|307626312|gb|ADN70616.1| dihydropyrimidine dehydrogenase [Escherichia coli UM146]
gi|315285782|gb|EFU45222.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 110-3]
gi|315294488|gb|EFU53836.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 153-1]
gi|315297989|gb|EFU57259.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 16-3]
gi|323951943|gb|EGB47817.1| dihydroorotate dehydrogenase [Escherichia coli H252]
gi|323955912|gb|EGB51665.1| dihydroorotate dehydrogenase [Escherichia coli H263]
gi|323968071|gb|EGB63481.1| dihydroorotate dehydrogenase [Escherichia coli M863]
gi|324013972|gb|EGB83191.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 60-1]
gi|324114437|gb|EGC08406.1| dihydroorotate dehydrogenase [Escherichia fergusonii B253]
gi|327252385|gb|EGE64044.1| hypothetical protein ECSTEC7V_2552 [Escherichia coli STEC_7v]
gi|331056474|gb|EGI28483.1| putative oxidoreductase [Escherichia coli TA206]
gi|355351181|gb|EHG00373.1| dihydropyrimidine dehydrogenase [Escherichia coli cloneA_i1]
gi|355420836|gb|AER85033.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i2']
gi|355425756|gb|AER89952.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i14']
gi|371610706|gb|EHN99234.1| hypothetical protein ESPG_00456 [Escherichia coli H397]
gi|380347730|gb|EIA36016.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli SCI-07]
gi|386140928|gb|EIG82080.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2741]
gi|386250048|gb|EII96217.1| dihydropyrimidine dehydrogenase [Escherichia coli TW07793]
gi|388411515|gb|EIL71684.1| dihydropyrimidine dehydrogenase [Escherichia coli HM605]
gi|430877147|gb|ELC00603.1| dihydroorotate dehydrogenase [Escherichia coli KTE4]
gi|430886445|gb|ELC09300.1| dihydroorotate dehydrogenase [Escherichia coli KTE5]
gi|430906348|gb|ELC27948.1| dihydroorotate dehydrogenase [Escherichia coli KTE16]
gi|430907363|gb|ELC28861.1| dihydroorotate dehydrogenase [Escherichia coli KTE15]
gi|430934768|gb|ELC55115.1| dihydroorotate dehydrogenase [Escherichia coli KTE39]
gi|430952861|gb|ELC71775.1| dihydroorotate dehydrogenase [Escherichia coli KTE187]
gi|430962205|gb|ELC80062.1| dihydroorotate dehydrogenase [Escherichia coli KTE188]
gi|430981989|gb|ELC98708.1| dihydroorotate dehydrogenase [Escherichia coli KTE201]
gi|430993825|gb|ELD10169.1| dihydroorotate dehydrogenase [Escherichia coli KTE205]
gi|430997903|gb|ELD14152.1| dihydroorotate dehydrogenase [Escherichia coli KTE206]
gi|431023513|gb|ELD36708.1| dihydroorotate dehydrogenase [Escherichia coli KTE214]
gi|431038071|gb|ELD49040.1| dihydroorotate dehydrogenase [Escherichia coli KTE220]
gi|431041846|gb|ELD52341.1| dihydroorotate dehydrogenase [Escherichia coli KTE224]
gi|431051462|gb|ELD61125.1| dihydroorotate dehydrogenase [Escherichia coli KTE230]
gi|431099942|gb|ELE04958.1| dihydroorotate dehydrogenase [Escherichia coli KTE53]
gi|431107826|gb|ELE11990.1| dihydroorotate dehydrogenase [Escherichia coli KTE55]
gi|431115763|gb|ELE19257.1| dihydroorotate dehydrogenase [Escherichia coli KTE57]
gi|431120809|gb|ELE23807.1| dihydroorotate dehydrogenase [Escherichia coli KTE58]
gi|431127513|gb|ELE29813.1| dihydroorotate dehydrogenase [Escherichia coli KTE60]
gi|431131002|gb|ELE33085.1| dihydroorotate dehydrogenase [Escherichia coli KTE62]
gi|431137921|gb|ELE39761.1| dihydroorotate dehydrogenase [Escherichia coli KTE67]
gi|431148131|gb|ELE49422.1| dihydroorotate dehydrogenase [Escherichia coli KTE72]
gi|431180756|gb|ELE80643.1| dihydroorotate dehydrogenase [Escherichia coli KTE86]
gi|431190150|gb|ELE89550.1| dihydroorotate dehydrogenase [Escherichia coli KTE87]
gi|431190772|gb|ELE90158.1| dihydroorotate dehydrogenase [Escherichia coli KTE93]
gi|431243328|gb|ELF37715.1| dihydroorotate dehydrogenase [Escherichia coli KTE169]
gi|431256703|gb|ELF49638.1| dihydroorotate dehydrogenase [Escherichia coli KTE8]
gi|431291229|gb|ELF81742.1| dihydroorotate dehydrogenase [Escherichia coli KTE43]
gi|431302172|gb|ELF91360.1| dihydroorotate dehydrogenase [Escherichia coli KTE22]
gi|431327241|gb|ELG14586.1| dihydroorotate dehydrogenase [Escherichia coli KTE59]
gi|431328519|gb|ELG15823.1| dihydroorotate dehydrogenase [Escherichia coli KTE63]
gi|431337752|gb|ELG24840.1| dihydroorotate dehydrogenase [Escherichia coli KTE65]
gi|431348154|gb|ELG35012.1| dihydroorotate dehydrogenase [Escherichia coli KTE84]
gi|431368331|gb|ELG54799.1| dihydroorotate dehydrogenase [Escherichia coli KTE118]
gi|431372865|gb|ELG58527.1| dihydroorotate dehydrogenase [Escherichia coli KTE123]
gi|431394540|gb|ELG78073.1| dihydroorotate dehydrogenase [Escherichia coli KTE141]
gi|431426819|gb|ELH08863.1| dihydroorotate dehydrogenase [Escherichia coli KTE192]
gi|431432642|gb|ELH14319.1| dihydroorotate dehydrogenase [Escherichia coli KTE194]
gi|431463234|gb|ELH43427.1| dihydroorotate dehydrogenase [Escherichia coli KTE183]
gi|431481853|gb|ELH61560.1| dihydroorotate dehydrogenase [Escherichia coli KTE207]
gi|431489157|gb|ELH68785.1| dihydroorotate dehydrogenase [Escherichia coli KTE209]
gi|431500144|gb|ELH79160.1| dihydroorotate dehydrogenase [Escherichia coli KTE215]
gi|431505444|gb|ELH84050.1| dihydroorotate dehydrogenase [Escherichia coli KTE218]
gi|431508439|gb|ELH86711.1| dihydroorotate dehydrogenase [Escherichia coli KTE223]
gi|431514593|gb|ELH92434.1| dihydroorotate dehydrogenase [Escherichia coli KTE227]
gi|431523519|gb|ELI00656.1| dihydroorotate dehydrogenase [Escherichia coli KTE229]
gi|431542864|gb|ELI17860.1| dihydroorotate dehydrogenase [Escherichia coli KTE109]
gi|431551248|gb|ELI25234.1| dihydroorotate dehydrogenase [Escherichia coli KTE113]
gi|431568922|gb|ELI41884.1| dihydroorotate dehydrogenase [Escherichia coli KTE124]
gi|431588051|gb|ELI59399.1| dihydroorotate dehydrogenase [Escherichia coli KTE129]
gi|431596554|gb|ELI66506.1| dihydroorotate dehydrogenase [Escherichia coli KTE131]
gi|431601998|gb|ELI71507.1| dihydroorotate dehydrogenase [Escherichia coli KTE133]
gi|431604339|gb|ELI73748.1| dihydroorotate dehydrogenase [Escherichia coli KTE137]
gi|431619288|gb|ELI88212.1| dihydroorotate dehydrogenase [Escherichia coli KTE145]
gi|431633844|gb|ELJ02106.1| dihydroorotate dehydrogenase [Escherichia coli KTE153]
gi|431642347|gb|ELJ10070.1| dihydroorotate dehydrogenase [Escherichia coli KTE157]
gi|431644966|gb|ELJ12619.1| dihydroorotate dehydrogenase [Escherichia coli KTE160]
gi|431660114|gb|ELJ27002.1| dihydroorotate dehydrogenase [Escherichia coli KTE167]
gi|431661433|gb|ELJ28246.1| dihydroorotate dehydrogenase [Escherichia coli KTE168]
gi|431670387|gb|ELJ36740.1| dihydroorotate dehydrogenase [Escherichia coli KTE174]
gi|431674158|gb|ELJ40341.1| dihydroorotate dehydrogenase [Escherichia coli KTE176]
gi|431687328|gb|ELJ52879.1| dihydroorotate dehydrogenase [Escherichia coli KTE179]
gi|431687980|gb|ELJ53521.1| dihydroorotate dehydrogenase [Escherichia coli KTE180]
gi|431705637|gb|ELJ70227.1| dihydroorotate dehydrogenase [Escherichia coli KTE88]
gi|431706374|gb|ELJ70945.1| dihydroorotate dehydrogenase [Escherichia coli KTE85]
gi|431729608|gb|ELJ93227.1| dihydroorotate dehydrogenase [Escherichia coli KTE97]
gi|431734084|gb|ELJ97485.1| dihydroorotate dehydrogenase [Escherichia coli KTE99]
gi|441710503|emb|CCQ08635.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli Nissle
1917]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|157158894|ref|YP_001463498.1| dihydropyrimidine dehydrogenase [Escherichia coli E24377A]
gi|191165356|ref|ZP_03027198.1| dihydroorotate dehydrogenase family protein [Escherichia coli B7A]
gi|218554712|ref|YP_002387625.1| dihydropyrimidine dehydrogenase [Escherichia coli IAI1]
gi|300819162|ref|ZP_07099364.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 107-1]
gi|300926249|ref|ZP_07142052.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 182-1]
gi|301328626|ref|ZP_07221687.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 78-1]
gi|331653576|ref|ZP_08354577.1| putative oxidoreductase [Escherichia coli M718]
gi|415876000|ref|ZP_11542573.1| dihydroorotate dehydrogenase family protein [Escherichia coli MS
79-10]
gi|416343710|ref|ZP_11677610.1| dihydropyrimidine dehydrogenase [Escherichia coli EC4100B]
gi|417133206|ref|ZP_11977991.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0588]
gi|419345812|ref|ZP_13887187.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13A]
gi|419350225|ref|ZP_13891563.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13B]
gi|419360730|ref|ZP_13901948.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13D]
gi|419365719|ref|ZP_13906881.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13E]
gi|419370651|ref|ZP_13911770.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC14A]
gi|419930851|ref|ZP_14448443.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-1]
gi|422956479|ref|ZP_16968953.1| dihydroorotate dehydrogenase [Escherichia coli H494]
gi|432750633|ref|ZP_19985237.1| dihydroorotate dehydrogenase [Escherichia coli KTE29]
gi|432806308|ref|ZP_20040236.1| dihydroorotate dehydrogenase [Escherichia coli KTE91]
gi|432934942|ref|ZP_20134379.1| dihydroorotate dehydrogenase [Escherichia coli KTE184]
gi|433194229|ref|ZP_20378219.1| dihydroorotate dehydrogenase [Escherichia coli KTE90]
gi|450218496|ref|ZP_21895870.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O08]
gi|157080924|gb|ABV20632.1| dihydroorotate dehydrogenase family protein [Escherichia coli
E24377A]
gi|190904519|gb|EDV64226.1| dihydroorotate dehydrogenase family protein [Escherichia coli B7A]
gi|218361480|emb|CAQ99069.1| putative oxidoreductase subunit [Escherichia coli IAI1]
gi|300417678|gb|EFK00989.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 182-1]
gi|300528315|gb|EFK49377.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 107-1]
gi|300845018|gb|EFK72778.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 78-1]
gi|320199742|gb|EFW74331.1| dihydropyrimidine dehydrogenase [Escherichia coli EC4100B]
gi|331048425|gb|EGI20501.1| putative oxidoreductase [Escherichia coli M718]
gi|342928931|gb|EGU97653.1| dihydroorotate dehydrogenase family protein [Escherichia coli MS
79-10]
gi|371600014|gb|EHN88792.1| dihydroorotate dehydrogenase [Escherichia coli H494]
gi|378186925|gb|EHX47546.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13A]
gi|378200403|gb|EHX60858.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13B]
gi|378203171|gb|EHX63595.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13D]
gi|378212954|gb|EHX73273.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13E]
gi|378217245|gb|EHX77524.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC14A]
gi|386151060|gb|EIH02349.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0588]
gi|388399370|gb|EIL60170.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-1]
gi|431296615|gb|ELF86326.1| dihydroorotate dehydrogenase [Escherichia coli KTE29]
gi|431354450|gb|ELG41176.1| dihydroorotate dehydrogenase [Escherichia coli KTE91]
gi|431453110|gb|ELH33520.1| dihydroorotate dehydrogenase [Escherichia coli KTE184]
gi|431715679|gb|ELJ79824.1| dihydroorotate dehydrogenase [Escherichia coli KTE90]
gi|449317556|gb|EMD07641.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O08]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + + P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQM-RTHPELCDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|422834062|ref|ZP_16882126.1| hypothetical protein ESOG_01727 [Escherichia coli E101]
gi|371603489|gb|EHN92144.1| hypothetical protein ESOG_01727 [Escherichia coli E101]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432809801|ref|ZP_20043694.1| dihydroorotate dehydrogenase [Escherichia coli KTE101]
gi|431362569|gb|ELG49147.1| dihydroorotate dehydrogenase [Escherichia coli KTE101]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + + P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQM-RTHPELCDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEIVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|331003589|ref|ZP_08327086.1| hypothetical protein HMPREF0491_01948 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412430|gb|EGG91821.1| hypothetical protein HMPREF0491_01948 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 420
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 120/206 (58%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++++SIM + D+W L+K++EKAGAD +E N SCP M MG GQ+P++V++
Sbjct: 104 VIVSSIMGA-SDDEWAILAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAV 683
S+ K+P K+TPN+ N+ A+AA EG A G++AINTV + +L + P V
Sbjct: 162 EVASSNTKLPIIAKMTPNLGNMEIPARAALEGGAKGIAAINTVKSITNLDINLRTGMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G SG A +P+ L+ +S + + PI G+GGI++ L+F+ GA
Sbjct: 222 NGK--SAISGYSGAAVKPIALRFISDLMHDPVVSKVPITGMGGIETWRDCLEFLMLGASN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I+G+ +
Sbjct: 280 LQVTTAVMQYGYRIVEDMISGMSHYM 305
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I ++D++G AV + +LD +++ I+ + C+ CG+CY++C D+ +QAI + ET
Sbjct: 310 INKLQDIVGSAVGNIVGADDLDRSYKILVRIDKEKCVKCGRCYVSCFDAAHQAIEYDYET 369
Query: 548 HQAHVTDE-CTGCTLCLSI 565
+ +E C GC LCL++
Sbjct: 370 RVPTINEEKCVGCHLCLNV 388
>gi|415840671|ref|ZP_11522099.1| hypothetical protein ECRN5871_3885 [Escherichia coli RN587/1]
gi|417280470|ref|ZP_12067770.1| dihydropyrimidine dehydrogenase [Escherichia coli 3003]
gi|425278440|ref|ZP_18669686.1| hypothetical protein ECARS42123_2538 [Escherichia coli ARS4.2123]
gi|323188128|gb|EFZ73423.1| hypothetical protein ECRN5871_3885 [Escherichia coli RN587/1]
gi|386244799|gb|EII86529.1| dihydropyrimidine dehydrogenase [Escherichia coli 3003]
gi|408201987|gb|EKI27121.1| hypothetical protein ECARS42123_2538 [Escherichia coli ARS4.2123]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFP PF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPTPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432962316|ref|ZP_20151969.1| dihydroorotate dehydrogenase [Escherichia coli KTE202]
gi|433063610|ref|ZP_20250533.1| dihydroorotate dehydrogenase [Escherichia coli KTE125]
gi|431474107|gb|ELH53929.1| dihydroorotate dehydrogenase [Escherichia coli KTE202]
gi|431581604|gb|ELI54051.1| dihydroorotate dehydrogenase [Escherichia coli KTE125]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D ++GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMVSGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|332278699|ref|ZP_08391112.1| dihydropyrimidine dehydrogenase [Shigella sp. D9]
gi|332101051|gb|EGJ04397.1| dihydropyrimidine dehydrogenase [Shigella sp. D9]
Length = 413
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 105 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 163 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 223 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 281 LQVTTGIMQYGYRIVEDMASGLSHYL 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 313 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 372
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 373 PHCNTEKCVGCLLC 386
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 63
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 64 -----DHLVKEDTGFIGFKNMEQIAE 84
>gi|187733441|ref|YP_001879524.1| dihydropyrimidine dehydrogenase [Shigella boydii CDC 3083-94]
gi|187430433|gb|ACD09707.1| dihydroorotate dehydrogenase family protein [Shigella boydii CDC
3083-94]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFT--ANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432851438|ref|ZP_20081823.1| dihydroorotate dehydrogenase [Escherichia coli KTE144]
gi|431399776|gb|ELG83166.1| dihydroorotate dehydrogenase [Escherichia coli KTE144]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQDMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|422830166|ref|ZP_16878327.1| hypothetical protein ESNG_02832 [Escherichia coli B093]
gi|371606856|gb|EHN95446.1| hypothetical protein ESNG_02832 [Escherichia coli B093]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|209766284|gb|ACI81454.1| putative oxidoreductase [Escherichia coli]
Length = 413
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 105 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 163 RTVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 223 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 281 LQVTTGIMQYGYRIVEDMASGLSHYL 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 313 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 372
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 373 PHCNTEKCVGCLLC 386
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 63
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 64 -----DHLVKEDTGFIGFKNMEQIAE 84
>gi|81764578|sp|Q8X643.1|PREA_ECO57 RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|12516464|gb|AAG57285.1|AE005446_13 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
gi|13362508|dbj|BAB36462.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
gi|73856146|gb|AAZ88853.1| putative oxidoreductase [Shigella sonnei Ss046]
gi|209766278|gb|ACI81451.1| putative oxidoreductase [Escherichia coli]
gi|209766280|gb|ACI81452.1| putative oxidoreductase [Escherichia coli]
gi|209766282|gb|ACI81453.1| putative oxidoreductase [Escherichia coli]
gi|209766286|gb|ACI81455.1| putative oxidoreductase [Escherichia coli]
Length = 413
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 105 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 163 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 223 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 281 LQVTTGIMQYGYRIVEDMASGLSHYL 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 313 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 372
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 373 PHCNTEKCVGCLLC 386
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 63
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 64 -----DHLVKEDTGFIGFKNMEQIAE 84
>gi|56412899|ref|YP_149974.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197361830|ref|YP_002141466.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56127156|gb|AAV76662.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197093306|emb|CAR58754.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G S A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSRKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|170682869|ref|YP_001744341.1| dihydropyrimidine dehydrogenase [Escherichia coli SMS-3-5]
gi|170520587|gb|ACB18765.1| dihydroorotate dehydrogenase family protein [Escherichia coli
SMS-3-5]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|417138864|ref|ZP_11982391.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0259]
gi|417308608|ref|ZP_12095452.1| hypothetical protein PPECC33_20240 [Escherichia coli PCN033]
gi|422972128|ref|ZP_16975180.1| dihydroorotate dehydrogenase [Escherichia coli TA124]
gi|338769795|gb|EGP24571.1| hypothetical protein PPECC33_20240 [Escherichia coli PCN033]
gi|371598009|gb|EHN86824.1| dihydroorotate dehydrogenase [Escherichia coli TA124]
gi|386157509|gb|EIH13849.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0259]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMHTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQDMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|293410506|ref|ZP_06654082.1| conserved hypothetical protein [Escherichia coli B354]
gi|432392661|ref|ZP_19635491.1| dihydroorotate dehydrogenase [Escherichia coli KTE21]
gi|291470974|gb|EFF13458.1| conserved hypothetical protein [Escherichia coli B354]
gi|430917817|gb|ELC38856.1| dihydroorotate dehydrogenase [Escherichia coli KTE21]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQDMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|218700619|ref|YP_002408248.1| dihydropyrimidine dehydrogenase [Escherichia coli IAI39]
gi|300935069|ref|ZP_07150100.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 21-1]
gi|386624842|ref|YP_006144570.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli O7:K1 str. CE10]
gi|432617215|ref|ZP_19853330.1| dihydroorotate dehydrogenase [Escherichia coli KTE75]
gi|432680756|ref|ZP_19916130.1| dihydroorotate dehydrogenase [Escherichia coli KTE143]
gi|218370605|emb|CAR18412.1| putative oxidoreductase subunit [Escherichia coli IAI39]
gi|300459650|gb|EFK23143.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 21-1]
gi|349738579|gb|AEQ13285.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli O7:K1 str. CE10]
gi|431154156|gb|ELE54978.1| dihydroorotate dehydrogenase [Escherichia coli KTE75]
gi|431220153|gb|ELF17533.1| dihydroorotate dehydrogenase [Escherichia coli KTE143]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432862742|ref|ZP_20087031.1| dihydroorotate dehydrogenase [Escherichia coli KTE146]
gi|431404781|gb|ELG88027.1| dihydroorotate dehydrogenase [Escherichia coli KTE146]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 QAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|425300985|ref|ZP_18690883.1| hypothetical protein EC07798_2805 [Escherichia coli 07798]
gi|408213371|gb|EKI37856.1| hypothetical protein EC07798_2805 [Escherichia coli 07798]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 LHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432719270|ref|ZP_19954239.1| dihydroorotate dehydrogenase [Escherichia coli KTE9]
gi|432793362|ref|ZP_20027446.1| dihydroorotate dehydrogenase [Escherichia coli KTE78]
gi|432799320|ref|ZP_20033342.1| dihydroorotate dehydrogenase [Escherichia coli KTE79]
gi|431263082|gb|ELF55071.1| dihydroorotate dehydrogenase [Escherichia coli KTE9]
gi|431339025|gb|ELG26087.1| dihydroorotate dehydrogenase [Escherichia coli KTE78]
gi|431343186|gb|ELG30150.1| dihydroorotate dehydrogenase [Escherichia coli KTE79]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQDMVGLANNNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|91211433|ref|YP_541419.1| dihydropyrimidine dehydrogenase [Escherichia coli UTI89]
gi|237704612|ref|ZP_04535093.1| dihydropyrimidine dehydrogenase [Escherichia sp. 3_2_53FAA]
gi|26108933|gb|AAN81136.1|AE016763_95 Hypothetical protein yeiA [Escherichia coli CFT073]
gi|91073007|gb|ABE07888.1| hypothetical protein YeiA [Escherichia coli UTI89]
gi|226900978|gb|EEH87237.1| dihydropyrimidine dehydrogenase [Escherichia sp. 3_2_53FAA]
Length = 413
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 105 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 163 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 223 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 281 LQVTTGIMQYGYRIVEDMASGLSHYL 306
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 313 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 372
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 373 PHCNTEKCVGCLLC 386
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 63
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 64 -----DHLVKEDTGFIGFKNMEQIAEH 85
>gi|432441644|ref|ZP_19683984.1| dihydroorotate dehydrogenase [Escherichia coli KTE189]
gi|432446758|ref|ZP_19689057.1| dihydroorotate dehydrogenase [Escherichia coli KTE191]
gi|433014413|ref|ZP_20202761.1| dihydroorotate dehydrogenase [Escherichia coli KTE104]
gi|433024031|ref|ZP_20212019.1| dihydroorotate dehydrogenase [Escherichia coli KTE106]
gi|433323624|ref|ZP_20400955.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli J96]
gi|430966098|gb|ELC83506.1| dihydroorotate dehydrogenase [Escherichia coli KTE189]
gi|430973031|gb|ELC89999.1| dihydroorotate dehydrogenase [Escherichia coli KTE191]
gi|431530511|gb|ELI07190.1| dihydroorotate dehydrogenase [Escherichia coli KTE104]
gi|431535724|gb|ELI12063.1| dihydroorotate dehydrogenase [Escherichia coli KTE106]
gi|432347722|gb|ELL42179.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli J96]
Length = 411
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSISNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|167750622|ref|ZP_02422749.1| hypothetical protein EUBSIR_01599 [Eubacterium siraeum DSM 15702]
gi|167656301|gb|EDS00431.1| dihydropyrimidine dehydrogenase [Eubacterium siraeum DSM 15702]
Length = 432
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+++SIM ++D+W L++ +E+AG D +E N SCP M MG G +PE+V +
Sbjct: 132 IIVSSIM-GESEDEWTALARLSEEAGVDMIECNFSCPQ-MTSHSMGSDVGTNPELVAKYT 189
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V+ K+P K+TPNITN+ A AA ADG++AINTV + ++ D P P +
Sbjct: 190 AAVKRGTKLPVLAKMTPNITNMEIPAIAAVNAGADGIAAINTVKSITNVDLDSFVPTPNI 249
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + GG SG A +P+ L+ +S + + N I G+GGI++ L+FI G
Sbjct: 250 NGK--SAVGGYSGKAVKPIALRFISDMKRNETLENVEISGMGGIETWRDGLEFILMGCTN 307
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QI ++V + ++DD + GL L
Sbjct: 308 LQITTSVMQYGYRIIDDMLDGLSRWL 333
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV + +G A + +T+ LD + + + CI CG+CY+AC D+G+QA+ F E +
Sbjct: 340 SVSEAVGLANKNMTDAGSLDRDTVTYPIFDKNKCIGCGRCYIACYDAGHQALDFDAEARK 399
Query: 550 -AHVTDECTGCTLCLSI 565
+ +C GC LC ++
Sbjct: 400 PVFLGSKCVGCHLCATV 416
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR-- 404
D+S+ CGLK NPF L+S+ + M +A + GW V KT K + VSPR
Sbjct: 34 DLSMTFCGLKCENPFFLSSSVVASGYDMCAKALDMGWAGIVYKTIGFAK--MNEVSPRFD 91
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITEL 460
I+ T+ ++ F N+E IS+ N KK++EN T++
Sbjct: 92 ILNKETTPYI------GFKNLEQISDHPLE---------ENLAILKKLKENYPTKI 132
>gi|416274745|ref|ZP_11643793.1| dihydropyrimidine dehydrogenase [Shigella dysenteriae CDC 74-1112]
gi|420380647|ref|ZP_14880109.1| dihydroorotate dehydrogenase family domain protein [Shigella
dysenteriae 225-75]
gi|320173376|gb|EFW48577.1| dihydropyrimidine dehydrogenase [Shigella dysenteriae CDC 74-1112]
gi|391301793|gb|EIQ59674.1| dihydroorotate dehydrogenase family domain protein [Shigella
dysenteriae 225-75]
Length = 304
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|300811424|ref|ZP_07091919.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300497582|gb|EFK32609.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
Length = 309
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 118/192 (61%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E++K A DALELNLSCP+ + E GM G PEMV I+ V+ V +P +
Sbjct: 110 EDYVEVAKILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMVEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT+ GL + L P +G +GG+S
Sbjct: 167 VKLTPNVTSIVEIAQAAERGGADGLTLINTLLGLHLDLKTR---RPVLGND----FGGLS 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + K + PI+G+GGI+S + A +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAVRMVAQV-KQATSLPIIGVGGINSPEDAAEFILAGASAVQIGS-MAFHDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|315924015|ref|ZP_07920242.1| dihydroorotate dehydrogenase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622641|gb|EFV02595.1| dihydroorotate dehydrogenase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 418
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 122/206 (59%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++++SIM + + ++W L++++EKAGAD +E N SCP M MG GQ+P++V++
Sbjct: 104 VIVSSIMGSTD-EEWAFLARESEKAGADLIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V ++ +P K+TPNI N+ A+AA EG A G++AINTV + +L D P V
Sbjct: 162 EVVSAATCLPVIAKMTPNIGNMEIPARAAIEGGAKGIAAINTVKAITNLDIDKMVGMPIV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G SG A +P+ L+ +S + + + P+ G+GGI++ L+F+ GA
Sbjct: 222 NGKSAVS--GYSGAAVKPIALRFISDLKHDPVLKDVPLTGVGGIETWRDCLEFLMLGAEN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I+GL +
Sbjct: 280 LQVTTAVMQYGYRIVEDMISGLSHFM 305
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I ++D++G A++ + + ELD +V+ IN+D C+ CG+CY++C D G+QAI F +
Sbjct: 310 IDRLRDLVGVALKNIISAEELDRSYKVLVQINEDKCVGCGRCYVSCYDGGHQAIQFDSQA 369
Query: 548 HQAHV-TDECTGCTLCLSI 565
+A + D+C GC LCL++
Sbjct: 370 RRATIDEDKCVGCHLCLNV 388
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+K NPF L+S+P + M R+A E GWG KT S+ + SPR
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVGSNYDMCRKALEAGWGGIYYKTISVY--IPNECSPRFD 63
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENL 456
+ G F N+E S+K + NFG KK++E+
Sbjct: 64 IASKE----GTPWTGFKNMEQTSDKPNEV---------NFGYIKKLKEDF 100
>gi|317472264|ref|ZP_07931592.1| dihydroorotate dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|316900221|gb|EFV22207.1| dihydroorotate dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 418
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM + N+++W L+KK +AG D +E N SCP M MG GQ+P++VR
Sbjct: 104 VIVASIMGS-NEEEWEILAKKVTEAGVDMIECNFSCPQ-MTSSAMGSDVGQNPDLVRRYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V + +P K+TPNI N+ A AA EG A G++AINTV + ++ + P V
Sbjct: 162 EVVSGATHLPVIAKMTPNIGNMEIPAIAAMEGGAKGIAAINTVKAITNIDVENMTAMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ + + + PI GIGGI++ AL FI G+
Sbjct: 222 NGK--SSISGYSGAAVKPIALRFITQMKQHPELKDVPITGIGGIETWKDALDFILVGSSN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + +V+D I+GL +
Sbjct: 280 LQVTTSVMQYGYRIVEDMISGLSHFM 305
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I + D++G A+ + ++D + N D C+ CG+CY++C D G+QAIT+ +
Sbjct: 310 IDKLSDLVGVALPNIVPADDIDRTFILYPDFNKDKCVGCGRCYVSCFDGGHQAITWDEKE 369
Query: 548 HQAHVT-DECTGCTLCLSI 565
+ + D+C GC LCL++
Sbjct: 370 RKPVLNEDKCVGCHLCLNV 388
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+K NPF L+S+P + M +A E GW KT + + SPR
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVGSNYEMCAKALEAGWAGVYYKTIGIF--IPNECSPRF- 62
Query: 407 KGTTSRHLYGPEQGSFLNIELISEK 431
TS+ G F N+E+IS+K
Sbjct: 63 -DITSKE--GTPWTGFKNMEMISDK 84
>gi|410944933|ref|ZP_11376674.1| dihydropyrimidine dehydrogenase subunit B [Gluconobacter frateurii
NBRC 101659]
Length = 422
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+M +D W + E+ GAD +ELN CPHGM ER MG A GQ PE V ++
Sbjct: 103 VIVSLMVPCEEDKWKAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W + + ++P VKLTPN+TNI A+AA G AD VS INT+ ++ + D P P VG
Sbjct: 163 WCKQNTRMPVIVKLTPNVTNILMPARAARAGGADAVSLINTIQSVIGVDLDAMAPMPVVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK---MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+GG G A +P+ L+ + IA+ + G + D A +F+ GA +
Sbjct: 223 GKG--THGGYCGPAVKPIALRMIGEIARDPTLAGIPISGIGGISNWRDSA-EFLAMGAGS 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+C+A + F +V+D I GL +
Sbjct: 280 LQVCTAAMHYGFRIVEDMIDGLSNWM 305
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+ G+K PNPF LASAPPT VRRAF+ GWG V KT + V N+S R
Sbjct: 1 MADLRTVFAGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVWKTLG-EDPAVVNLSSR 59
Query: 405 I-VKGTTSRHLYGPEQGSFLNIELISEK 431
G R L G NIELIS++
Sbjct: 60 YGALGFEGRRLIG-----LNNIELISDR 82
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++DV G+AV + + +L+ K + +A I+ + C+ CG C++AC D+ +QAI+ +
Sbjct: 313 LEDVTGRAVSQFVPWNQLNMKFRTIADIDQEACVGCGLCHIACEDTSHQAISKRNGPDRR 372
Query: 551 H---VTDECTGCTLCLSI 565
H + +EC GC LC +
Sbjct: 373 HYEVIEEECVGCNLCAHV 390
>gi|354500082|ref|XP_003512131.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Cricetulus
griseus]
Length = 176
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 7/127 (5%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVS--LQNGLPKRQINTPVETILSVKDVIGQA 498
+ +P+FG Y + R+ +I ++ + +G LQ R+ P + I ++KDVIG+A
Sbjct: 25 KKLPSFGPYLEQRKKIIAVSKIRARDQNGTCSPLQ-----RKPFIPQKPIPAIKDVIGKA 79
Query: 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
+Q + + EL +QVVALIN++MCINCGKCYM CNDSGYQAI F PETH VTD CTG
Sbjct: 80 LQYLGTFGELSGVEQVVALINEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTG 139
Query: 559 CTLCLSI 565
CTLCLS+
Sbjct: 140 CTLCLSV 146
>gi|408382592|ref|ZP_11180135.1| dihydroorotate dehydrogenase 1B [Methanobacterium formicicum DSM
3637]
gi|407814668|gb|EKF85292.1| dihydroorotate dehydrogenase 1B [Methanobacterium formicicum DSM
3637]
Length = 301
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 10/207 (4%)
Query: 567 IASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLW 626
IASI + +D+ L+ + E DALELN+SCPH M G G A GQDP++ NI
Sbjct: 93 IASIYGS-TPEDFASLASQVEDL-VDALELNVSCPHAM--EGCGAAIGQDPDLTSNIVGA 148
Query: 627 VRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTK 686
V+ SVKIP VKLTPN+T+I +IA+AA AD ++ IN++ M + + P + +
Sbjct: 149 VKKSVKIPVIVKLTPNVTDIVEIARAAESAGADALTLINSLGPGMRIDPE-TAHPVLSNR 207
Query: 687 KLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICS 746
+GG+SG A +P+ L+ V + PI+G+GGI + ++F+ AGA VQI +
Sbjct: 208 ----FGGMSGPAIKPVALRCVYQTYQNV-KIPIMGVGGITNYQDVVEFLYAGASCVQIGT 262
Query: 747 AVQNQDFTVVDDYITGLQTLLYLKSTQ 773
AV V + TGL+ + K+ Q
Sbjct: 263 AVMYHGLEVFQNINTGLEKFMRDKNYQ 289
>gi|419376051|ref|ZP_13917076.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14B]
gi|378220138|gb|EHX80404.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14B]
Length = 232
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 116/203 (57%), Gaps = 9/203 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 27 VLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 85 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + + P +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQM-RTHPELRDFPISGIGGIETWEDAAEFLLLGAA 201
Query: 741 AVQICSAVQNQDFTVVDDYITGL 763
+Q+ + + + +V+D +GL
Sbjct: 202 TLQVTTGIMQYGYRIVEDMASGL 224
>gi|365902096|ref|ZP_09439919.1| dihydropyrimidine dehydrogenase subunit B [Lactobacillus
malefermentans KCTC 3548]
Length = 422
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIM T N++DW L++ +AG+D +E+NLSCP M MG G +PE+V+
Sbjct: 105 IVIASIMGT-NEEDWESLAQLVTEAGSDMIEMNLSCPQ-MTSHEMGSDVGTNPELVKKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNIT++ AKA+ G ADG++ INTV + +L D P V
Sbjct: 163 AAVKRGSDLPMMAKMTPNITDMVPAAKASMAGGADGIATINTVKSVANLDLDKKVALPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + A PI GIGGI++ A +FI GA
Sbjct: 223 DGK--SSISGFSGKAVKPIALRFLQQLREAAGLEQLPISGIGGIETWQDAAEFILMGATT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + +V D GL +
Sbjct: 281 LQVTTSVMQYGYRIVKDMKNGLMHYM 306
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
++NGL + V+ + +++G A +++ EL+ +V I+ D CI CG+CY+
Sbjct: 298 MKNGLMHYMEDQGVD---HLSELVGVANKKIVPVEELNRDYKVYPKIDWDKCIGCGRCYV 354
Query: 532 ACNDSGYQAITFHPETHQAHV-TDECTGCTLC 562
+C D +QAIT++ +T + V T +C GC LC
Sbjct: 355 SCFDGAHQAITWNIKTRRPTVDTSKCVGCQLC 386
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV+ G+ F NPF L+S+P M +AF+ GWG V KT + V VSPR
Sbjct: 5 DLSVDFLGVHFENPFLLSSSPVGNCYEMCAKAFDEGWGGVVFKTIGPKHFKVDEVSPRFD 64
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ T G F N+E I+E +
Sbjct: 65 ELTKE----GTPFVGFKNMEQIAEHS 86
>gi|404492342|ref|YP_006716448.1| dihydropyrimidine dehydrogenase subunit A [Pelobacter carbinolicus
DSM 2380]
gi|77544449|gb|ABA88011.1| NADH-dependent ferredoxin:NADP+ oxidoreductase, alpha subunit
[Pelobacter carbinolicus DSM 2380]
Length = 470
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 157/294 (53%), Gaps = 26/294 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V+ EV+ +KDLGV IEC + + +T+++LR++ + A+FIG N
Sbjct: 192 IPEFRLPKRIVDIEVKRLKDLGVNIECN-VVVGKTLTLDELREE-FDAVFIG----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKE-SLPILKGT-VIVLGAGDTA 159
+PI + E G Y++ +L RV L + + PI+ G V V+G G+TA
Sbjct: 246 LPIMLNIDGENLKGVYSANEYLTRV------NLMAAWRNDVPTPIIHGKHVAVIGGGNTA 299
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK-I 218
D ++ R GA + ++V+R+ + A EE+ A EE EF+ +PV++ +N +
Sbjct: 300 MDAVRTSRRLGAEQSIIVYRRTEAEMPARIEEIHHAKEEGIEFILLAAPVKILGDENGWV 359
Query: 219 AGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLD 272
G+ R E E + V E + L + +++A G+ N +L A P +KL+
Sbjct: 360 KGLLCQRMELGEPDASGRRRPVPIEGETFTLDVDVVVNAIGTRA--NPLLTATAPDLKLN 417
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
K+G E + AT++PGVF GGD T + ++ DGK++A I Y+ +KN
Sbjct: 418 KWGNIETDEHG-ATNLPGVFAGGDIVRGGATVILAMGDGKSSAQAIDAYLSQKN 470
>gi|289423327|ref|ZP_06425135.1| dihydroorotate oxidase [Peptostreptococcus anaerobius 653-L]
gi|289156258|gb|EFD04915.1| dihydroorotate oxidase [Peptostreptococcus anaerobius 653-L]
Length = 417
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 14/251 (5%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L SIM + +++W L+KK +AGAD +E N SCP M MG GQ+PE+V +
Sbjct: 104 VLAVSIMGS-TEEEWSILAKKVTEAGADLIECNFSCPQ-MTSHAMGSDVGQNPELVEKYT 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V S +P K+TPNI N+ A AA +G A G++AINT+ + ++ + P V
Sbjct: 162 RAVVESTHLPVIAKMTPNIGNMEIPAMAAMKGGAKGIAAINTIKAITNIDVENMTAMPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ + + + PI G+GGI++ AL+F+ GA
Sbjct: 222 NAK--SSISGYSGAAVKPIALRFITQMKQHEELKDVPITGMGGIETWSDALEFLLCGASN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKE 800
+Q+ ++V + +V+D I+GL + + +++ G + P V PA + D++
Sbjct: 280 LQVTTSVMQYGYRIVEDMISGLSHFMDERGIDKIEDLVGMALPNIV-----PAEEL-DRD 333
Query: 801 GKAIPNFGEYK 811
K IP E K
Sbjct: 334 FKIIPKIDEDK 344
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I ++D++G A+ + ELD +++ I++D C+ CG+CY++C D+ +QAI + ET
Sbjct: 310 IDKIEDLVGMALPNIVPAEELDRDFKIIPKIDEDKCVGCGRCYVSCYDAAHQAIDWDGET 369
Query: 548 HQAHVTDECTGCTLCLSI 565
+ + D C GC LCL++
Sbjct: 370 RKPVINDNCVGCHLCLNV 387
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+K NPF L+S+P + M+++AFE GW KT + + SPR
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVCSNYDMIKKAFEAGWAGVYYKTIGIF--IPDECSPRF- 62
Query: 407 KGTTSRHLYGPEQGSFLNIELISEK 431
T + G F N+E IS+K
Sbjct: 63 -DITRKE--GAVWTGFKNMEQISDK 84
>gi|211827379|gb|AAH28831.2| Dpyd protein [Mus musculus]
Length = 239
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 717 FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLK 775
FPIL GGIDSA+ LQF+ +GA +Q+CSA+QNQDFTV++DY TGL+ LLYLKS +L
Sbjct: 2 FPILATGGIDSAESGLQFLHSGASVLQVCSAIQNQDFTVIEDYCTGLKALLYLKSIEELA 61
Query: 776 GWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITELNLKK 825
WDGQSPP HQKGKP + + G+ +P+FG Y + R+ +I +++
Sbjct: 62 DWDGQSPPIISHQKGKPVPRVAELMGQKLPSFGPYLEQRKKIIAASKIRQ 111
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ +I +++ + + + L ++ N+ + I ++KDVIG+
Sbjct: 85 LMGQKLPSFGPYLEQRKKIIAASKIRQKDQNTAC--SPLQRKHFNSQ-KPIPAIKDVIGK 141
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + E+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 142 SLQYLGTFGEMSIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 201
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 202 GCTLCLSV 209
>gi|189425084|ref|YP_001952261.1| dihydroorotate dehydrogenase [Geobacter lovleyi SZ]
gi|189421343|gb|ACD95741.1| dihydroorotate dehydrogenase family protein [Geobacter lovleyi SZ]
Length = 398
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 566 LIASIMCTYNK-DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+I SIM N D+W L+ + AGAD LELN SCPHG ERG G A GQ+P+ I+
Sbjct: 102 IIGSIMGAANSPDEWHSLALGCQDAGADLLELNFSCPHGYPERGRGAAIGQNPDYAAQIT 161
Query: 625 LWVRS--SVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWP 681
WV + IP KLT + NI +IA+ A G AINT+ P P
Sbjct: 162 RWVTDCKEITIPVIPKLTAAVANIQNIAEELALAGAHGFCAINTIPSFFGFDLRTLRPKP 221
Query: 682 AVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
+G K T+YGG SG +P+ L+AVS + + P P++ GGI + A++F+ GA
Sbjct: 222 DIGGK--TSYGGYSGPGIKPIALRAVSELCQS-PGLPVMASGGIANGFDAVEFMLLGAPV 278
Query: 742 VQICSAVQNQDFTVVD 757
VQ+ + V F ++D
Sbjct: 279 VQMATEVMLHGFGIID 294
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 354 GLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRH 413
G+ F NPF LASAPPT + MVRRAFE GWG AV KT L ++ V N+ R RH
Sbjct: 11 GVVFRNPFVLASAPPTATADMVRRAFEAGWGGAVIKT--LIREPVHNLPNRF---AAIRH 65
Query: 414 LYGPEQGSFLNIELISEKT 432
G F N+EL+SE+
Sbjct: 66 --GNRITGFENLELLSEQA 82
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 493 DVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHV 552
D IG T++ +L V + + C +CG C+ AC D GYQAI+++
Sbjct: 314 DFIGLCRDSATSFKKLPAGTMVSPRLLAERCTHCGACFTACRDGGYQAISWNKGLPGIDP 373
Query: 553 TDECTGCTLCLSILIASIM 571
T C C+LC + A +
Sbjct: 374 T-VCKSCSLCSHVCPAGAL 391
>gi|301021088|ref|ZP_07185129.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 69-1]
gi|331673675|ref|ZP_08374438.1| putative oxidoreductase [Escherichia coli TA280]
gi|419920695|ref|ZP_14438806.1| dihydropyrimidine dehydrogenase [Escherichia coli KD2]
gi|300398269|gb|EFJ81807.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 69-1]
gi|331068948|gb|EGI40340.1| putative oxidoreductase [Escherichia coli TA280]
gi|388384322|gb|EIL46056.1| dihydropyrimidine dehydrogenase [Escherichia coli KD2]
Length = 411
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARMVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|331647798|ref|ZP_08348890.1| putative oxidoreductase [Escherichia coli M605]
gi|386619764|ref|YP_006139344.1| Dihydropyrimidine dehydrogenase like protein [Escherichia coli
NA114]
gi|387830082|ref|YP_003350019.1| putative dihydropyrimidine dehydrogenase [Escherichia coli SE15]
gi|417662762|ref|ZP_12312343.1| hypothetical protein ECAA86_02352 [Escherichia coli AA86]
gi|432397976|ref|ZP_19640757.1| dihydroorotate dehydrogenase [Escherichia coli KTE25]
gi|432407204|ref|ZP_19649913.1| dihydroorotate dehydrogenase [Escherichia coli KTE28]
gi|432422495|ref|ZP_19665040.1| dihydroorotate dehydrogenase [Escherichia coli KTE178]
gi|432500635|ref|ZP_19742392.1| dihydroorotate dehydrogenase [Escherichia coli KTE216]
gi|432559398|ref|ZP_19796067.1| dihydroorotate dehydrogenase [Escherichia coli KTE49]
gi|432695010|ref|ZP_19930209.1| dihydroorotate dehydrogenase [Escherichia coli KTE162]
gi|432711199|ref|ZP_19946259.1| dihydroorotate dehydrogenase [Escherichia coli KTE6]
gi|432723600|ref|ZP_19958520.1| dihydroorotate dehydrogenase [Escherichia coli KTE17]
gi|432728187|ref|ZP_19963066.1| dihydroorotate dehydrogenase [Escherichia coli KTE18]
gi|432741881|ref|ZP_19976600.1| dihydroorotate dehydrogenase [Escherichia coli KTE23]
gi|432919612|ref|ZP_20123726.1| dihydroorotate dehydrogenase [Escherichia coli KTE173]
gi|432927514|ref|ZP_20128943.1| dihydroorotate dehydrogenase [Escherichia coli KTE175]
gi|432981577|ref|ZP_20170352.1| dihydroorotate dehydrogenase [Escherichia coli KTE211]
gi|432991188|ref|ZP_20179852.1| dihydroorotate dehydrogenase [Escherichia coli KTE217]
gi|433097019|ref|ZP_20283203.1| dihydroorotate dehydrogenase [Escherichia coli KTE139]
gi|433106441|ref|ZP_20292416.1| dihydroorotate dehydrogenase [Escherichia coli KTE148]
gi|433111399|ref|ZP_20297264.1| dihydroorotate dehydrogenase [Escherichia coli KTE150]
gi|281179239|dbj|BAI55569.1| putative dihydropyrimidine dehydrogenase [Escherichia coli SE15]
gi|330911980|gb|EGH40490.1| hypothetical protein ECAA86_02352 [Escherichia coli AA86]
gi|331043522|gb|EGI15660.1| putative oxidoreductase [Escherichia coli M605]
gi|333970265|gb|AEG37070.1| Dihydropyrimidine dehydrogenase like protein [Escherichia coli
NA114]
gi|430916080|gb|ELC37158.1| dihydroorotate dehydrogenase [Escherichia coli KTE25]
gi|430929963|gb|ELC50472.1| dihydroorotate dehydrogenase [Escherichia coli KTE28]
gi|430944107|gb|ELC64206.1| dihydroorotate dehydrogenase [Escherichia coli KTE178]
gi|431028212|gb|ELD41256.1| dihydroorotate dehydrogenase [Escherichia coli KTE216]
gi|431090618|gb|ELD96369.1| dihydroorotate dehydrogenase [Escherichia coli KTE49]
gi|431233592|gb|ELF29179.1| dihydroorotate dehydrogenase [Escherichia coli KTE162]
gi|431248879|gb|ELF43054.1| dihydroorotate dehydrogenase [Escherichia coli KTE6]
gi|431266154|gb|ELF57716.1| dihydroorotate dehydrogenase [Escherichia coli KTE17]
gi|431273876|gb|ELF64950.1| dihydroorotate dehydrogenase [Escherichia coli KTE18]
gi|431283572|gb|ELF74431.1| dihydroorotate dehydrogenase [Escherichia coli KTE23]
gi|431443656|gb|ELH24682.1| dihydroorotate dehydrogenase [Escherichia coli KTE173]
gi|431444037|gb|ELH25061.1| dihydroorotate dehydrogenase [Escherichia coli KTE175]
gi|431490886|gb|ELH70493.1| dihydroorotate dehydrogenase [Escherichia coli KTE211]
gi|431495270|gb|ELH74856.1| dihydroorotate dehydrogenase [Escherichia coli KTE217]
gi|431615367|gb|ELI84496.1| dihydroorotate dehydrogenase [Escherichia coli KTE139]
gi|431627148|gb|ELI95559.1| dihydroorotate dehydrogenase [Escherichia coli KTE148]
gi|431628703|gb|ELI97079.1| dihydroorotate dehydrogenase [Escherichia coli KTE150]
Length = 411
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGSAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|432895166|ref|ZP_20106886.1| dihydroorotate dehydrogenase [Escherichia coli KTE165]
gi|431421533|gb|ELH03745.1| dihydroorotate dehydrogenase [Escherichia coli KTE165]
Length = 411
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGSAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEKT 432
HL + G F N+E I+E +
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEHS 84
>gi|15668835|ref|NP_247638.1| dihydroorotate dehydrogenase 1B [Methanocaldococcus jannaschii DSM
2661]
gi|2500041|sp|Q58070.1|PYRDB_METJA RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|1591367|gb|AAB98649.1| dihydroorotase dehydrogenase (pyrD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 306
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 116/192 (60%), Gaps = 16/192 (8%)
Query: 566 LIASIMCTYNKDD--WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I SI Y KD+ + E++KK E+ D +ELN+SCPH +G G GQ+P++ ++
Sbjct: 101 IIGSI---YGKDEEEFAEVAKKMERY-VDIIELNISCPHA---KGYGATIGQNPDLSYDV 153
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
V+ +VKIP F KLTPN+T+I +IA+A + DG+ AINTV G+ P A
Sbjct: 154 CKAVKKAVKIPVFAKLTPNVTDIIEIAQAVVDAGVDGLVAINTVRGMAIDIRAKKPILA- 212
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
+GG+SG A + +G+K V + + F + PI+G+GGI S + A++++ AGA AVQ
Sbjct: 213 -----NKFGGLSGKAIKSIGIKVVWDLYENF-DVPIIGVGGIMSGEDAIEYMMAGASAVQ 266
Query: 744 ICSAVQNQDFTV 755
I S V + + +
Sbjct: 267 IGSGVYYRGYDI 278
>gi|168184462|ref|ZP_02619126.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
Bf]
gi|237796254|ref|YP_002863806.1| dihydropyrimidine dehydrogenase [Clostridium botulinum Ba4 str.
657]
gi|182672460|gb|EDT84421.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
Bf]
gi|229261448|gb|ACQ52481.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
Ba4 str. 657]
Length = 411
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + N PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDEKLKNVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
+Q+ +AV + +V+D I GL Y+K K
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLS--YYMKEKGFK 310
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N + C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNKENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T+ G F N+E I+E +
Sbjct: 62 ---TNLEKEGTSFLGFKNMEQIAEHS 84
>gi|254482153|ref|ZP_05095394.1| Dihydroorotate dehydrogenase family protein [marine gamma
proteobacterium HTCC2148]
gi|214037478|gb|EEB78144.1| Dihydroorotate dehydrogenase family protein [marine gamma
proteobacterium HTCC2148]
Length = 552
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D+++E++K +D LELNLSCPH +G G+A GQDP+MVR I V++ V IP
Sbjct: 119 DEFVEVAKILAPV-SDGLELNLSCPHA---KGYGMAMGQDPDMVREIVAAVKAVVDIPVI 174
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
KLTPN +IT IA+AA G ADG AINTV G SA G+P + G GG+SG
Sbjct: 175 PKLTPNTPDITVIARAAEAGGADGFCAINTV-GPGYTSAHGHPVLSNGA------GGMSG 227
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
P+GLK V +A++ + PI+G GG+ SAD F AGA V + SA+
Sbjct: 228 KGILPIGLKCVKEVAEV-SDLPIIGCGGVSSADDVRAFFDAGAEIVGVGSAL 278
>gi|366160596|ref|ZP_09460458.1| dihydropyrimidine dehydrogenase subunit B [Escherichia sp. TW09308]
gi|432372824|ref|ZP_19615865.1| dihydroorotate dehydrogenase [Escherichia coli KTE11]
gi|430895963|gb|ELC18214.1| dihydroorotate dehydrogenase [Escherichia coli KTE11]
Length = 411
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWDEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|218549560|ref|YP_002383351.1| dihydropyrimidine dehydrogenase [Escherichia fergusonii ATCC 35469]
gi|218357101|emb|CAQ89734.1| putative oxidoreductase subunit [Escherichia fergusonii ATCC 35469]
Length = 411
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ ++ +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWNEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|424816940|ref|ZP_18242091.1| dihydropyrimidine dehydrogenase [Escherichia fergusonii ECD227]
gi|325497960|gb|EGC95819.1| dihydropyrimidine dehydrogenase [Escherichia fergusonii ECD227]
Length = 411
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ ++ +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWNEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|422780941|ref|ZP_16833726.1| dihydroorotate dehydrogenase [Escherichia coli TW10509]
gi|323977659|gb|EGB72745.1| dihydroorotate dehydrogenase [Escherichia coli TW10509]
Length = 411
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPNINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|422334394|ref|ZP_16415401.1| dihydroorotate dehydrogenase [Escherichia coli 4_1_47FAA]
gi|432771110|ref|ZP_20005449.1| dihydroorotate dehydrogenase [Escherichia coli KTE50]
gi|373244620|gb|EHP64101.1| dihydroorotate dehydrogenase [Escherichia coli 4_1_47FAA]
gi|431314807|gb|ELG02739.1| dihydroorotate dehydrogenase [Escherichia coli KTE50]
Length = 411
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|218690296|ref|YP_002398508.1| dihydropyrimidine dehydrogenase [Escherichia coli ED1a]
gi|218427860|emb|CAR08626.1| putative oxidoreductase subunit [Escherichia coli ED1a]
Length = 411
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDTAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|374297589|ref|YP_005047780.1| hydrogenase, Fe-only [Clostridium clariflavum DSM 19732]
gi|359827083|gb|AEV69856.1| hydrogenase, Fe-only [Clostridium clariflavum DSM 19732]
Length = 1148
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 154/297 (51%), Gaps = 35/297 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E++L++ LGVKI E++L T I +E L KD + A+++ IG
Sbjct: 245 IPEYRLPKATLDKEIDLIRSLGVKIMTEKALGTH-IRLEDLSKD-FDAVYLAIGSWTPTP 302
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ I +G + G + FL +V +++ L TV+V+G G+TA DCA
Sbjct: 303 LHI-EGENLD-GVWLGIRFLEQVTKNAEINL------------GDTVVVIGGGNTAIDCA 348
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ---VDVKDNKIAG 220
+ALR GA V +V+R+ + A P EV+ A E E L M+P + VD K K+
Sbjct: 349 RTALRKGAKSVKLVYRRTRDEMPAEPYEVEEALHEGVEMLFLMAPTKITSVDGKKKKLTC 408
Query: 221 MQFNRTEQNEKGEW--VEDEEQRIKLKANYIISAFGST----LLDNDVLEAIKPVKLDKY 274
++ E + G V E ++A+ II A G + L ND+ PVKL+K+
Sbjct: 409 IKMTLGEPDRSGRRRPVPIEGSEFDIEADTIIGAIGQSTNTQFLYNDL-----PVKLNKW 463
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA-----WHIHKYIQEKN 326
G ++N TM TS +F GGD T +++V G+ AA + + YI+E+N
Sbjct: 464 GDIDINGKTMQTSEYNIFAGGDCVTGPATVIQAVAAGRRAAEAMDNFLMKGYIKEEN 520
>gi|170019536|ref|YP_001724490.1| dihydropyrimidine dehydrogenase [Escherichia coli ATCC 8739]
gi|169754464|gb|ACA77163.1| dihydroorotate dehydrogenase family protein [Escherichia coli ATCC
8739]
Length = 411
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++ GAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEVGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|333910150|ref|YP_004483883.1| dihydroorotate dehydrogenase [Methanotorris igneus Kol 5]
gi|333750739|gb|AEF95818.1| dihydroorotate dehydrogenase family protein [Methanotorris igneus
Kol 5]
Length = 304
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 14/216 (6%)
Query: 566 LIASIMCTYNKDD--WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I SI Y KD+ + +++K E D +ELN+SCPH G G G GQ+P++ +
Sbjct: 97 IIGSI---YGKDEREFAIVAEKIEPY-VDMIELNISCPHAGG--GYGATIGQNPDLSYKV 150
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
V+ +VKIP F KLTPN+T+I IAKA E ADG++AINT+ M + + P +
Sbjct: 151 VESVKDAVKIPVFAKLTPNVTDIKVIAKAVVEAGADGITAINTLGPGMVIDIEARK-PIL 209
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
K +GG+SG A +P+ +K V + + + PI+G+GGI + AL+FI AGA AVQ
Sbjct: 210 SNK----FGGMSGKAIKPIAVKIVYDLYETV-DVPIIGVGGITTGKDALEFIMAGASAVQ 264
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDG 779
+ + V + + + ++ L K+ +LK G
Sbjct: 265 VGTGVYYRGYDIFRKICEEMEVFLKEKNVKLKDLVG 300
>gi|226950228|ref|YP_002805319.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A2 str.
Kyoto]
gi|226840903|gb|ACO83569.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A2 str. Kyoto]
Length = 411
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + N PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLKNVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I GL +
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLSYYM 304
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T+ G F N+E I+E +
Sbjct: 62 ---TNLEKEGTSFLGFKNMEQIAEHS 84
>gi|159471299|ref|XP_001693794.1| psbA translation factor [Chlamydomonas reinhardtii]
gi|158283297|gb|EDP09048.1| psbA translation factor [Chlamydomonas reinhardtii]
Length = 431
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 116/217 (53%), Gaps = 26/217 (11%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM YNKD W E+ + E+ DA E+N SCPHG+ ER MG+A GQDPE++ +
Sbjct: 163 MLIASIMEEYNKDAWEEIIGRCEEIKVDAFEINFSCPHGLPERRMGMAMGQDPEVLGEVC 222
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-----------MSL 673
W+ + +P + K+TPN+T+I+ A A + +GV+AINT+ + M +
Sbjct: 223 GWINKAATVPVWAKMTPNVTDISFPADVALKAGCEGVAAINTIQCISATHYIGAGHDMRM 282
Query: 674 SADGNPW---PAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV 730
G P P +G + T G++ + + +++S GIGG+++
Sbjct: 283 LGGGPPVHHPPGIGWLRAATAPGLAAASDVHLSRRSLS------------GIGGVETGGD 330
Query: 731 ALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
A +FI G+ VQ+C+ V + VV + GLQ +
Sbjct: 331 AAEFILLGSDTVQVCTGVMIHGYPVVKNLCGGLQKFM 367
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTK---TFSLQKDMVTNVSP 403
D+SVE+ G+K PNPF + S PP T ++++AF+ GWG + K T SL V NV+P
Sbjct: 60 DLSVEVNGMKLPNPFIIGSGPPGTNYQVMKKAFDEGWGGVICKASPTLSLDSSKVVNVTP 119
Query: 404 RIVK-GTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRE 454
R K S ++G + N ELIS++ + E K++RE
Sbjct: 120 RYAKIRDYSNRVFG-----WQNFELISDRPFDVM---------LAEMKRLRE 157
>gi|433198783|ref|ZP_20382685.1| dihydroorotate dehydrogenase [Escherichia coli KTE94]
gi|431721487|gb|ELJ85481.1| dihydroorotate dehydrogenase [Escherichia coli KTE94]
Length = 411
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 114/202 (56%), Gaps = 7/202 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHTMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P +
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPII 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGL 763
+Q+ + + + +V+D +GL
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGL 300
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|188590495|ref|YP_001921441.1| dihydropyrimidine dehydrogenase [Clostridium botulinum E3 str.
Alaska E43]
gi|188500776|gb|ACD53912.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E3 str. Alaska E43]
Length = 412
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIM N+ +W +L+K +AGAD +E N SCP M MG GQ+PE+V+
Sbjct: 104 IVVASIM-GENEKEWEDLAKLVTEAGADMIECNFSCPQ-MTSHEMGSDVGQNPELVKKYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +++ A A+ EG A G++ INT+ + + + P V
Sbjct: 162 EATRRGTNLPILAKMTPNIGDMSVPAIASMEGGATGLATINTIKSITGIDINSMTAKPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + +AK PI GIGGI++ + AL+FI G+
Sbjct: 222 NAK--SSVSGYSGKAVKPIALRFIYELAKNEKLKGVPISGIGGIETWEDALEFILLGSSN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + VV+D I+GL +
Sbjct: 280 LQVTTSVMQYGYRVVEDMISGLSHFM 305
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A++ + +LD + V +N++ C+ CG+CY++C D +QAI ++ E +
Sbjct: 313 LEDMVGIAIKNIIPAEDLDREYIVYPEVNEEKCLGCGRCYISCYDGAHQAIKWNSEERKP 372
Query: 551 HVT-DECTGCTLC 562
V D C GC LC
Sbjct: 373 EVNKDRCVGCHLC 385
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
D+S+E CG+K NPF L+S+P M +AFE GWG + KT M VSPR
Sbjct: 6 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKAFEAGWGGVMFKTIGFF--MPNEVSPRF 62
>gi|417718014|ref|ZP_12366915.1| hypothetical protein SFK227_2748 [Shigella flexneri K-227]
gi|333016869|gb|EGK36193.1| hypothetical protein SFK227_2748 [Shigella flexneri K-227]
Length = 367
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 59 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 116
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 117 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 176
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 177 NGK--SSISGYSGKVVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 234
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
Q+ + + + +V+D +GL L
Sbjct: 235 SQVTTGIMQYGYRIVEDMASGLSHYL 260
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 267 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 326
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 327 PHCNTEKCVGCLLC 340
>gi|251777769|ref|ZP_04820689.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243082084|gb|EES47974.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 412
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIM N+ +W +L+K +AGAD +E N SCP M MG GQ+PE+V+
Sbjct: 104 IVVASIM-GENEKEWEDLAKLVTEAGADMIECNFSCPQ-MTSHEMGSDVGQNPELVKKYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +++ A A+ EG A G++ INT+ + + + P V
Sbjct: 162 EATRRGTNLPILAKMTPNIGDMSVPAIASMEGGATGLATINTIKSITGIDINSMTAKPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + +AK PI GIGGI++ + AL+FI G+
Sbjct: 222 NAK--SSVSGYSGKAVKPIALRFIYELAKNEKLKGVPISGIGGIETWEDALEFILLGSSN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + VV+D I+GL +
Sbjct: 280 LQVTTSVMQYGYRVVEDMISGLSHFM 305
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A++ + +LD + V ++++ C+ CG+CY++C D +QAI ++ E +
Sbjct: 313 LEDMVGIAIKNIIPAEDLDREYIVYPEVDEEKCLGCGRCYISCYDGAHQAIKWNSEERKP 372
Query: 551 HVT-DECTGCTLC 562
V D C GC LC
Sbjct: 373 EVNKDRCVGCHLC 385
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
D+S+E CG+K NPF L+S+P M +AFE GWG + KT M VSPR
Sbjct: 6 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKAFEAGWGGVMFKTIGFF--MPNEVSPRF 62
>gi|389852413|ref|YP_006354647.1| glutamate synthase (NADPH/NADH) small chain [Pyrococcus sp. ST04]
gi|388249719|gb|AFK22572.1| putative glutamate synthase (NADPH/NADH) small chain [Pyrococcus
sp. ST04]
Length = 469
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 166/294 (56%), Gaps = 27/294 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + +++E+E ++ LGV+I+ + L + +T+++L ++ Y A+FIG G +
Sbjct: 191 IPEFRLPKEILDYELEKLRKLGVEIKTDH-LVGKTVTLQELLQE-YDAVFIGTGAGTPKL 248
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
+ I L + + Y++ FL R+ + PI G VIV+G G+TA D
Sbjct: 249 LDIPGILLDRI--YSANEFLTRINLMKAYKF----PEYDTPIAVGKRVIVIGGGNTAMDA 302
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V+V +R+G ++ A EE++ A EE +F+ F+ PV+ V ++ ++ +
Sbjct: 303 ARSALRLGA-EVIVAYRRGKEDMSARIEEIKHAEEEGVKFMFFVQPVEFVGDEEGRVKAV 361
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFG----STLLDNDVLEAIKPVKLD 272
+F + E++ +G+ + + I ++A+ +I A G +L++ LEA +
Sbjct: 362 KFEKMKPLEERDARGKRKIVGTGEYITVEADTVIIAIGLEPNRIILEDSGLEA------N 415
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
G +V+ M TS+PGVF GGD T + ++ DGK AA IH+YI +KN
Sbjct: 416 PDGTLKVDERLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAVAIHEYISKKN 468
>gi|187935649|ref|YP_001886506.1| dihydropyrimidine dehydrogenase [Clostridium botulinum B str.
Eklund 17B]
gi|187723802|gb|ACD25023.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
B str. Eklund 17B]
Length = 412
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I++ASIM N+ +W +L+K +AGAD +E N SCP M MG GQ+PE+V+
Sbjct: 104 IVVASIM-GENEKEWEDLAKLVTEAGADMIECNFSCPQ-MTSHEMGSDVGQNPELVKKYC 161
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPNI +++ A A+ EG A G++ INT+ + + + P V
Sbjct: 162 EATRRGTNLPILAKMTPNIGDMSVPAIASMEGGATGLATINTIKSITGIDINSMTAKPVV 221
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + +AK PI GIGGI++ + AL+FI G+
Sbjct: 222 NAK--SSVSGYSGKAVKPIALRFIYELAKNEKLKGVPISGIGGIETWEDALEFILLGSSN 279
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + VV+D I+GL +
Sbjct: 280 LQVTTSVMQYGYRVVEDMISGLSHFM 305
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A++ + +LD + V ++++ C+ CG+CY++C D +QAI ++ E +
Sbjct: 313 LEDMVGIAIKNIIPAEDLDREYIVYPKVDEEKCLGCGRCYISCYDGAHQAIKWNAEERKP 372
Query: 551 HVT-DECTGCTLC 562
V D C GC LC
Sbjct: 373 EVNKDRCVGCHLC 385
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
D+S+E CG+K NPF L+S+P M +AFE GWG + KT M VSPR
Sbjct: 6 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKAFEAGWGGVMFKTIGFF--MPNEVSPRF 62
>gi|168179227|ref|ZP_02613891.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
NCTC 2916]
gi|182669884|gb|EDT81860.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
NCTC 2916]
Length = 411
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 117/209 (55%), Gaps = 9/209 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + N PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLRNVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLK 770
+Q+ +AV + +V+D I GL Y+K
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLS--YYMK 305
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T+ G F N+E I+E +
Sbjct: 62 ---TNLEKEGTPFLGFKNMEQIAEHS 84
>gi|325289503|ref|YP_004265684.1| dihydroorotate oxidase B, catalytic subunit [Syntrophobotulus
glycolicus DSM 8271]
gi|324964904|gb|ADY55683.1| dihydroorotate oxidase B, catalytic subunit [Syntrophobotulus
glycolicus DSM 8271]
Length = 502
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 116/209 (55%), Gaps = 7/209 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASI+ ++++W L++K +AG D +E N SCPH GE G+G GQ PE+V +
Sbjct: 204 VVVASIL-GQDEEEWTFLARKVTEAGVDIIECNFSCPHMTGE-GLGSDVGQSPELVALYT 261
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
R +P K+TPNI N+ A AA E A G++AINT+ +M+++ D P V
Sbjct: 262 AATRKGTDLPILAKMTPNIGNMEIPAIAAMENGATGIAAINTIKSIMNINLDDFVSEPRV 321
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K + GG SG +P+ L+ + + K PI G+GGI++ A +FI G
Sbjct: 322 DGK--SCVGGYSGKTVKPIALRFIHDMKKHPKLKECPISGMGGIETWRDAAEFIAMGCAN 379
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLK 770
VQI ++V + +++D+I GL L K
Sbjct: 380 VQITTSVMQYGYRIIEDFIDGLTAFLSEK 408
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A+ V +L+ + C+ CG+CY++C D G+QA+ E +
Sbjct: 412 SLQEIIGLALPNVVQADQLNRNSISYPKFDFHKCLGCGRCYLSCYDGGHQALEIAEENGR 471
Query: 550 AHVT-DECTGCTLC 562
+ +C GC LC
Sbjct: 472 PKLMPKKCVGCQLC 485
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
+++ +E CG+ NPF L+S+ + +MV +AFE GW AV KT + + VSPR
Sbjct: 105 INLGIEFCGIPCENPFFLSSSVVASNYTMVAKAFEMGWAGAVFKT--IGTFVPQEVSPRF 162
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEKT 432
+S G F NIE IS+ T
Sbjct: 163 ----SSIGKEGNSFSGFKNIEQISDHT 185
>gi|170767624|ref|ZP_02902077.1| dihydroorotate dehydrogenase family protein [Escherichia albertii
TW07627]
gi|170123958|gb|EDS92889.1| dihydroorotate dehydrogenase family protein [Escherichia albertii
TW07627]
Length = 411
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W +L++ ++AGAD +E N SCP M MG GQ P +V
Sbjct: 103 VLIASIM-GENEQQWEDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPVLVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ D+A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCDVALAAKHGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMTSGLSHYL 304
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPNINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
+ T++C GC LC
Sbjct: 371 PYCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISEK 431
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAEH 83
>gi|153940176|ref|YP_001392096.1| dihydropyrimidine dehydrogenase [Clostridium botulinum F str.
Langeland]
gi|384463084|ref|YP_005675679.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
F str. 230613]
gi|152936072|gb|ABS41570.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
F str. Langeland]
gi|295320101|gb|ADG00479.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
F str. 230613]
Length = 411
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + N PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLKNVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I GL +
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLSYYM 304
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 MLDKENCVGCHLCANV 387
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E I+E +
Sbjct: 62 ---DNLEKEGTSFLGFKNMEQIAEHS 84
>gi|417828533|ref|ZP_12475086.1| dihydroorotate dehydrogenase family protein [Shigella flexneri
J1713]
gi|335574909|gb|EGM61221.1| dihydroorotate dehydrogenase family protein [Shigella flexneri
J1713]
Length = 335
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ E+V
Sbjct: 27 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSSELVEKYC 84
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 85 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 144
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 145 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 202
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 203 LQVTTGIMQYGYRIVEDMASGLSHYL 228
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 235 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 294
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 295 PHCNTEKCVGCLLC 308
>gi|417688691|ref|ZP_12337932.1| hypothetical protein SB521682_0944 [Shigella boydii 5216-82]
gi|332093238|gb|EGI98298.1| hypothetical protein SB521682_0944 [Shigella boydii 5216-82]
Length = 411
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++A AD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEADADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANHNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|427805260|ref|ZP_18972327.1| putative oxidoreductase [Escherichia coli chi7122]
gi|427809819|ref|ZP_18976884.1| putative oxidoreductase [Escherichia coli]
gi|412963442|emb|CCK47367.1| putative oxidoreductase [Escherichia coli chi7122]
gi|412969998|emb|CCJ44641.1| putative oxidoreductase [Escherichia coli]
Length = 413
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIAS M N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 105 VLIASSM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 163 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 223 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 281 LQVTTGIMQYGYRIVEDMASGLSHYL 306
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 313 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 372
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 373 PHCNTEKCVGCLLC 386
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 63
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 64 -----DHLVKEDTGFIGFKNMEQIAE 84
>gi|443618203|ref|YP_007382059.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli APEC
O78]
gi|443422711|gb|AGC87615.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli APEC
O78]
Length = 411
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIAS M N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASSM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|282164223|ref|YP_003356608.1| dihydroorotate dehydrogenase [Methanocella paludicola SANAE]
gi|282156537|dbj|BAI61625.1| dihydroorotate dehydrogenase [Methanocella paludicola SANAE]
Length = 315
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 14/226 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI + +++E++K GA A ELN+SCPH RG G+ G DP +V+ I+
Sbjct: 103 VIASIFGA-TEAEFIEVAKGLP--GASAYELNVSCPH---ARGYGMQVGTDPALVKAIAH 156
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ +V P +VKLTPN+T+IT I +AA EG AD V AINT+ + ++ D +P +G
Sbjct: 157 AVKGTVNAPVWVKLTPNVTDITSIGRAAQEGGADAVVAINTLKAI-AIDIDSG-YPILGN 214
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG A +P+ ++ V + + P++G GG+ S A++FI AGA AV+I
Sbjct: 215 IQ----GGLSGPAIKPVAVRCVYDLYSAL-DIPVIGAGGVSSWADAVEFIMAGAAAVEIG 269
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGK 791
SAV + D V GL L K+ LK G + H+ K
Sbjct: 270 SAVYD-DIGVFAAVSMGLSDYLDRKNMTLKDLTGMAHRMVKHEADK 314
>gi|384108877|ref|ZP_10009765.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Treponema sp. JC4]
gi|383869581|gb|EID85192.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Treponema sp. JC4]
Length = 503
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 128/214 (59%), Gaps = 9/214 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ASIM N+++W LSKK E+AGADA+ELN SCP+ M + G+G GQ PE+V + +
Sbjct: 202 FILASIM-GQNEEEWGTLSKKCEEAGADAIELNFSCPN-MADEGLGSDIGQVPELVESFT 259
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
+S+ KIP KLTPN+ N++ A+AA +G ADG+SAINT+ + ++ P+V
Sbjct: 260 RAAKSACKIPVIAKLTPNVANMSPAAEAAKKGGADGISAINTIKSVTGVNLHTYVSAPSV 319
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP--ILGIGGIDSADVALQFIQAGAHA 741
K + GG SG A +P+ L+ ++ + I G+GGI++ A +FI GA +
Sbjct: 320 HGK--SALGGYSGTAVKPIALRFIAELGLNKNLNNLHITGMGGIENWTDAAEFILLGAGS 377
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
+QI +AV + +++D +GL LY+ K
Sbjct: 378 LQITTAVMKYGYRIIEDLKSGLA--LYMNQKGFK 409
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 504 NYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCL 563
N L+ V N C+ CG+C ++C+D G+QA+ E +C GC LC+
Sbjct: 425 NTDSLERDSIVYPKFNSQKCVGCGRCTISCSDGGHQALELTSERKIKMDPKKCVGCHLCI 484
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 336 LPKFMSHIDLVDISV---EICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFS 392
LP + D VD + +ICG+ NPF L+S+ + M RAFE GW A KT
Sbjct: 90 LPHDVESADAVDFTCLKSDICGIPIENPFLLSSSVVASTYDMCARAFEAGWAGACFKT-- 147
Query: 393 LQKDMVTNVSPRI--VKGTTSRHLYGPEQGSFLNIELISEKT 432
+ + SPR ++G + + F NIE +S+ +
Sbjct: 148 ICSFPIHECSPRFSSLEGDNNSFI------GFKNIEQLSDHS 183
>gi|253698676|ref|YP_003019865.1| oxidoreductase [Geobacter sp. M21]
gi|251773526|gb|ACT16107.1| glutamate synthase (NADPH), homotetrameric [Geobacter sp. M21]
Length = 469
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 21/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ EV ++ +GV IEC + + +TI +LR + + A+FI G A +
Sbjct: 192 IPEFRLPKEIIDREVAVLSRMGVAIECNVIIG-KTLTIPQLRSE-FDAVFIANG---AGL 246
Query: 104 IPIFQGLTEEM-GFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTAFD 161
+ L E + G Y + FL RV G S PIL + V V+G G+TA D
Sbjct: 247 PTMLNILGENLKGVYAANEFLTRVNLME----AGRRADSSTPILQRDEVAVIGGGNTAMD 302
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAG 220
C +A R GA + ++V+R+G + A EE++ A EE EF+ +PV V +D ++
Sbjct: 303 CVRTARRLGAKRAMIVYRRGEAEMPARVEEIKHAKEEGVEFIMLTAPVAIVATEDGWVSA 362
Query: 221 MQFNRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGSTLLDNDVLEAIKP-VKLDKY 274
++ + E + Q I+ L A +I+A G++ N +L A P + L+K+
Sbjct: 363 LRCQKMELGPADDSGRRRPQAIEGSEFDLPAGIVINAVGTSA--NPLLTATAPDLTLNKW 420
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
G N TS+PGVF GGD T + ++ DGK AA I KY++
Sbjct: 421 GNIVTN-DEGETSIPGVFAGGDIVRGGATVILAMGDGKRAAAAIDKYLK 468
>gi|95930174|ref|ZP_01312913.1| glutamate synthase (NADPH), homotetrameric [Desulfuromonas
acetoxidans DSM 684]
gi|95133868|gb|EAT15528.1| glutamate synthase (NADPH), homotetrameric [Desulfuromonas
acetoxidans DSM 684]
Length = 470
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 31/296 (10%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IPQ+RLP D ++ EV ++ +GV+IEC + + +T+ +L + Y A+FIG N
Sbjct: 192 IPQFRLPKDIIDVEVARLQQMGVEIECNVIIG-KTLTVAQLSEQ-YDAVFIG----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKE--SLPILKGT-VIVLGAGDT 158
+P + E G Y + +L RV L G + E S P+LKG V V+GAG+T
Sbjct: 246 LPAMMNIPGENLKGVYAANEYLTRV------NLMGAGQSETCSTPVLKGKHVAVVGAGNT 299
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A DC +A R GA + ++V+R+ + A EEV A E EF+ SP+ V+ D+
Sbjct: 300 AMDCVRTARRLGAERAMIVYRRSEEQMPARVEEVHHAKAEGVEFVMLTSPLAVEGSDD-- 357
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRI--------KLKANYIISAFGSTLLDNDVLEAIKP-V 269
+ R ++ E GE QR L + +++A G+ N +L A P +
Sbjct: 358 GWVNALRCQKMELGEPDASGRQRPIAIDGAEEVLNVDIVVNALGTRA--NPLLTATAPEL 415
Query: 270 KLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
KL+ +G V AT++PGV+ GGD T + ++ DGK AA I +Y+ K
Sbjct: 416 KLNDWGNI-VADDDGATALPGVYAGGDITRGGSTVILAMGDGKRAAAAIDRYLTGK 470
>gi|444947993|ref|ZP_21266315.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0839]
gi|444557573|gb|ELV34899.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0839]
Length = 411
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D + L L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASRLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|422844117|ref|ZP_16890827.1| dihydroorotate oxidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325685769|gb|EGD27843.1| dihydroorotate oxidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 309
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 118/192 (61%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E+++ A DALELNLSCP+ + E GM G PEMV I+ V+ V +P +
Sbjct: 110 EDYVEVAEILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMVEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT+ GL + L P +G +GG+S
Sbjct: 167 VKLTPNVTSIVEIAQAAERGGADGLTLINTLLGLHLDLKTR---RPVLGND----FGGLS 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + + + PI+G+GGI+S + A +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAVRMVAQV-RQATSLPIIGVGGINSPEDAAEFILAGASAVQIGS-MAFHDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|253682030|ref|ZP_04862827.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
D str. 1873]
gi|253561742|gb|EES91194.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
D str. 1873]
Length = 411
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W +L+K + GAD +E N SCP M MG GQ+PE+V+
Sbjct: 103 VLVASIM-GQNESEWTKLAKLVTEIGADIIECNFSCPQ-MTSHDMGSDVGQNPELVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR +P K+TPNI N+T A A+ EG A G++ INT+ + + D P +
Sbjct: 161 QAVRKGTNLPILAKMTPNIGNMTIPAIASIEGGATGIATINTIKCISGIDLDNMVGLPVI 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + K P+ GIGGI++ + A++FI G+
Sbjct: 221 NGK--SSVSGYSGKAVKPIALRFIYELKTNKKLKEIPLSGIGGIETWEDAVEFILLGSSN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + +V+D I+GL +
Sbjct: 279 LQVTTSVMQYGYRIVEDMISGLSYYM 304
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A++ + ELD V N D C+ CG+CY++C D G+QAI + E
Sbjct: 312 LEDMVGLALKNIIPAEELDRDYIVYPEFNMDKCVGCGRCYISCYDGGHQAIEWDLENRLP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ +E C GC LC ++
Sbjct: 372 VLNEEKCVGCHLCSNV 387
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+D+S+E CG+K NPF L+S+P M +A E GWG V KT VSPR
Sbjct: 4 MDLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFFSP--KEVSPR 60
>gi|194466721|ref|ZP_03072708.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
100-23]
gi|227543869|ref|ZP_03973918.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
CF48-3A]
gi|338202679|ref|YP_004648824.1| dihydroorotate dehydrogenase [Lactobacillus reuteri SD2112]
gi|157805448|gb|ABV80266.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri]
gi|194453757|gb|EDX42654.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
100-23]
gi|227186130|gb|EEI66201.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
CF48-3A]
gi|336447919|gb|AEI56534.1| dihydroorotate dehydrogenase [Lactobacillus reuteri SD2112]
Length = 432
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM +DW L+K +AGAD +ELN SCP M MG G +PE+ +
Sbjct: 105 VLIASIM-GETLEDWTNLAKLVTEAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKKNC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNIT + + KA EG ADG SAINTV ++ + P +
Sbjct: 163 EAVKRGTSLPVLAKMTPNITTMVPVVKACLEGGADGFSAINTVKSIVDVDLKKKVGLPNI 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G+SG A +P+ L+ + + A PI GIGGI++ + A +FI GA
Sbjct: 223 DGK--SSVSGLSGKAVKPIALRFLQQLRSAAGLEQLPISGIGGIETWEDAAEFILLGATT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + ++DD GL +
Sbjct: 281 LQVTTAIMEYGYRIIDDLTNGLMHYM 306
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L NGL V+ + +D++G A + + +LD +V I+ D CI CG+C++
Sbjct: 298 LTNGLMHYMEEQHVDHL---QDLVGLANKNIIPTNQLDRNYKVYPKIDWDKCIGCGRCFI 354
Query: 532 ACNDSGYQAITFHPETHQ-AHVTDECTGCTLC 562
+C D +QA+T+ E Q +C GC LC
Sbjct: 355 SCQDGAHQALTWDDEKRQPVFDKSKCVGCQLC 386
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV+ G+ F NPF L+S+P M + A++ GWG V KT S + VSPR
Sbjct: 5 DLSVDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPTHFKIDEVSPRFD 64
Query: 407 K-GTTSRHLYGPEQGSFLNIELISE 430
+ H +F N+E +SE
Sbjct: 65 ELAKEDMHFV-----AFKNMEQLSE 84
>gi|419192177|ref|ZP_13735631.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7E]
gi|378038706|gb|EHW01215.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7E]
Length = 411
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG Q PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVRQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|259502930|ref|ZP_05745832.1| dihydroorotate dehydrogenase [Lactobacillus antri DSM 16041]
gi|259169123|gb|EEW53618.1| dihydroorotate dehydrogenase [Lactobacillus antri DSM 16041]
Length = 431
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM DW +L+K AGAD +ELN SCP M MG G +PE+ ++
Sbjct: 105 VLIASIM-GETPQDWTDLAKLVTAAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKSNC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNIT + + KA G ADG+S+INTV + + D P +
Sbjct: 163 AAVKRGTNLPVLAKMTPNITTMIPVVKACLAGGADGISSINTVKSITDVDLDNKVALPNI 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G+SG + +P+ L+ + I A P+ GIGGI++ + A +FI GA
Sbjct: 223 NGK--SAVSGLSGKSVKPIALRFLQQIRSAAGLEQLPVSGIGGIETWEDAAEFILLGAST 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + ++DD GL +
Sbjct: 281 LQVTTAIMQYGYRIIDDLTNGLMHYM 306
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+ F NPF L+S+P M + A++ GWG V KT S ++ VSPR
Sbjct: 5 DLSIDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPDHFVIDEVSPRFA 64
Query: 407 KGTTSRHLYGPEQGSFLNIELISE 430
+ T + +F N+E ++E
Sbjct: 65 QLTKEDTPF----IAFKNMEQLAE 84
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L NGL V+ + KD++G A + + +LD +V I+ D CI CG+C++
Sbjct: 298 LTNGLMHYMDEQHVDHL---KDLVGIANKNIVPTNQLDRDYKVYPKIDWDKCIGCGRCFI 354
Query: 532 ACNDSGYQAITFHPETHQAHV-TDECTGCTLC 562
+C D +QA+ + + +C GC LC
Sbjct: 355 SCQDGAHQAMGWDADKRLPTFDQSKCVGCQLC 386
>gi|417713175|ref|ZP_12362142.1| hypothetical protein SFK272_2909 [Shigella flexneri K-272]
gi|333002866|gb|EGK22422.1| hypothetical protein SFK272_2909 [Shigella flexneri K-272]
Length = 380
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 72 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 129
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 130 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 189
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 190 NGK--SSISGYSGKVVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 247
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
Q+ + + + +V+D +GL L
Sbjct: 248 SQVTTGIMQYGYRIVEDMASGLSHYL 273
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 280 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 339
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 340 PHCNTEKCVGCLLC 353
>gi|331269853|ref|YP_004396345.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
BKT015925]
gi|329126403|gb|AEB76348.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
BKT015925]
Length = 411
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 118/212 (55%), Gaps = 7/212 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W L++ + GAD +E N SCP M MG GQ+PE+V+
Sbjct: 103 VLVASIM-GQNESEWTRLAELVTEIGADIIECNFSCPQ-MTSHDMGSDVGQNPELVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR +P K+TPNI N+T A A+ EG A G++ INT+ + ++ D P +
Sbjct: 161 QAVRKGTHLPILAKMTPNIGNMTIPAIASIEGGATGIATINTIKCISGINLDNMVGLPVI 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + N P+ GIGGI++ + A++FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIHELKTNEELKNIPVSGIGGIETWEDAVEFILLGSTN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQ 773
+QI ++V + +V+D I+G+ + K Q
Sbjct: 279 LQITTSVMQYGYRIVEDMISGVSYYMKEKGFQ 310
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A++ + +LD V + D C+ CG+CY++C D G+QAI + E
Sbjct: 312 LEDMVGLALKNIIPAEKLDRDYIVYPEFDMDKCVGCGRCYISCYDGGHQAIEWDSENRSL 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ +E C GC LC ++
Sbjct: 372 VLNEEKCVGCHLCSNV 387
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
+D+S+E CG+K NPF L+S+P M +A E GWG V KT VSPR
Sbjct: 4 MDLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFFSP--KEVSPRF 61
Query: 406 --VKGTTSRHLYGPEQGSFLNIELISEKT 432
+K ++ L F N+E I+E +
Sbjct: 62 DNLKKESTPFL------GFKNMEQIAEHS 84
>gi|378821839|ref|ZP_09844692.1| pyridine nucleotide-disulfide oxidoreductase [Sutterella parvirubra
YIT 11816]
gi|378599335|gb|EHY32370.1| pyridine nucleotide-disulfide oxidoreductase [Sutterella parvirubra
YIT 11816]
Length = 670
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 149/298 (50%), Gaps = 21/298 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP YRLP D + E E ++ +G + E++L RD TI+ L K GY A+F+G+G
Sbjct: 300 IPAYRLPNDLLASETEAIERMGGRYFFEKALG-RDFTIDSLLKRGYRAVFLGVGCALGQH 358
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ + G+ FL + +G+ + E L G V+V+G G+ A DC
Sbjct: 359 LGLPDEDVTAKGYLKGLDFLLDIEAKQTEGV----ELE----LDGDVVVVGCGNVAMDCC 410
Query: 164 TSALRCGAN-KVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
SA R N +V V +R+ + A P E+ A EE EF +P +V V+D ++ G++
Sbjct: 411 RSARRLLKNGRVTVSYRRTRASAPADPAEITAALEEDIEFAFLTAPKRVLVEDGRVVGIE 470
Query: 223 FNRTEQNE------KG-EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
R E+ E +G VE E I + Y+I+A G + D + ++L + G
Sbjct: 471 LVRMEETEPDASGRRGVRAVEGSEFVIPCR--YVIAAIGQKM-DGSIFCEKDGIRLTRRG 527
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDK 333
EV ++TS PGVF GGD A + + + DG+TAA IH+++ ++ +P +
Sbjct: 528 TIEVK-DDLSTSRPGVFAGGDAAAGPTSLIWGMADGQTAAQSIHEWLLTEDTGFIPRR 584
>gi|300918787|ref|ZP_07135356.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 115-1]
gi|419922179|ref|ZP_14440201.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-15]
gi|425305868|ref|ZP_18695579.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli N1]
gi|300414030|gb|EFJ97340.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 115-1]
gi|388396755|gb|EIL57829.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-15]
gi|408228493|gb|EKI52027.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli N1]
Length = 411
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ P +V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPVLVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|417885694|ref|ZP_12529845.1| 4Fe-4S binding domain protein [Lactobacillus oris F0423]
gi|341594613|gb|EGS37297.1| 4Fe-4S binding domain protein [Lactobacillus oris F0423]
Length = 431
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM DW +L+K AGAD +ELN SCP M MG G +PE+ ++
Sbjct: 105 VLIASIM-GETPQDWTDLAKLVTAAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKSNC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNIT + + KA G ADG+S+INTV + + D P +
Sbjct: 163 AAVKRGTDLPVLAKMTPNITTMIPVVKACLAGGADGISSINTVKSITDVDLDNKVALPNI 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G+SG + +P+ L+ + I A P+ GIGGI++ + A +FI GA
Sbjct: 223 NGK--SAVSGLSGKSVKPIALRFLQQIRSAAGLEQLPVSGIGGIETWEDAAEFILLGAST 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + ++DD GL +
Sbjct: 281 LQVTTAIMQYGYRIIDDLTNGLMHYM 306
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+ F NPF L+S+P M + A++ GWG V KT S ++ VSPR
Sbjct: 5 DLSIDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPDHFVIDEVSPRFA 64
Query: 407 KGTTSRHLYGPEQGSFLNIELISE 430
+ T + +F N+E ++E
Sbjct: 65 QLTKEDTPF----IAFKNMEQLAE 84
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L NGL V+ +KD++G A + + +LD +V I+ D CI CG+C++
Sbjct: 298 LTNGLMHYMDEQHVD---HLKDLVGIANKNIVPTNQLDRDYKVYPKIDWDKCIGCGRCFI 354
Query: 532 ACNDSGYQAITFHPETHQAHV-TDECTGCTLC 562
+C D +QA+ + + +C GC LC
Sbjct: 355 SCQDGAHQAMGWDDDKRLPTFDQSKCVGCQLC 386
>gi|365842606|ref|ZP_09383605.1| glutamate synthase [Flavonifractor plautii ATCC 29863]
gi|373115468|ref|ZP_09529640.1| glutamate synthase (NADPH), homotetrameric [Lachnospiraceae
bacterium 7_1_58FAA]
gi|364575331|gb|EHM52732.1| glutamate synthase [Flavonifractor plautii ATCC 29863]
gi|371670289|gb|EHO35372.1| glutamate synthase (NADPH), homotetrameric [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 465
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 156/296 (52%), Gaps = 26/296 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ + LGV +E + + + I+++ ++GY A+FIG G
Sbjct: 183 IPEFRLPKAIVQNEVDKLTALGVDLETDMVIG-KTFDIDEMFEEGYEAVFIGSGAG---- 237
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRV--ATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDT 158
+P+F G+ E G Y++ +L R+ + ++G P+ + G+ ++G G+
Sbjct: 238 LPMFMGIEGETLAGVYSANEYLTRINLMKAYREGY-------DTPLKISGSAAIIGGGNV 290
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNK 217
A D A A R GA V V++R+ + A EEV A EE EF+ +PV+V D +
Sbjct: 291 AMDAARCAKRMGAEHVYVLYRRDEEEMPARKEEVHHAKEEGIEFMLLTNPVKVLDDGTGR 350
Query: 218 IAGMQ---FNRTEQNEKGEWVED--EEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ G++ T +E G E L+ + ++ + G++ N ++ + P ++
Sbjct: 351 VGGLECVKMRLTAPDESGRRAPKVVEGSNFTLEVDTVVMSLGTS--PNPLIRSTTPGLET 408
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
++ G +V+ TMATS PGV+ GGD + T + ++ GK AA +H+Y+QEK++
Sbjct: 409 NRKGCLQVDEETMATSRPGVYAGGDAVTGAATVILAMGAGKKAAESMHQYLQEKHS 464
>gi|312868661|ref|ZP_07728854.1| dihydropyrimidine dehydrogenase [Lactobacillus oris PB013-T2-3]
gi|311095775|gb|EFQ54026.1| dihydropyrimidine dehydrogenase [Lactobacillus oris PB013-T2-3]
Length = 431
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM DW +L+K AGAD +ELN SCP M MG G +PE+ +
Sbjct: 105 VLIASIM-GETPQDWTDLAKLVTAAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKTNC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNIT + + KA G ADGVS+INTV + + D P +
Sbjct: 163 AAVKKGTDLPVLAKMTPNITTMIPVVKACLAGGADGVSSINTVKSITDVDLDNKVALPNI 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K + G+SG + +P+ L+ + I A P+ GIGGI++ + A +FI GA
Sbjct: 223 NGK--SAVSGLSGKSVKPIALRFLQQIRSAAGLEQLPVSGIGGIETWEDAAEFILLGAST 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + ++DD GL +
Sbjct: 281 LQVTTAIMQYGYRIIDDLTNGLMHYM 306
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L NGL V+ + KD++G A Q + +LD +V I+ D CI CG+C++
Sbjct: 298 LTNGLMHYMDEQGVDQL---KDLVGIANQNIVPTNQLDRDYKVYPKIDWDKCIGCGRCFI 354
Query: 532 ACNDSGYQAITFHPETHQAHV-TDECTGCTLC 562
+C D +QA+ + + +C GC LC
Sbjct: 355 SCQDGAHQAMGWDDDKRLPTFDQSKCVGCQLC 386
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+ F NPF L+S+P M + A++ GWG V KT S ++ VSPR
Sbjct: 5 DLSIDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPDHFVIDEVSPRFA 64
Query: 407 K 407
+
Sbjct: 65 Q 65
>gi|338730602|ref|YP_004659994.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Thermotoga
thermarum DSM 5069]
gi|335364953|gb|AEH50898.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Thermotoga
thermarum DSM 5069]
Length = 469
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 152/291 (52%), Gaps = 16/291 (5%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ V+ L VKI + + +T+E++ K+ + A+FIG+G
Sbjct: 186 IPEFRLPKVIVEREVKYVESLSVKILLNTPVG-KSVTVEEILKE-FDAVFIGVGAGTPKF 243
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
+ I T G Y++ FL R+ + P+ KG VIV+G G+ A D
Sbjct: 244 LNISG--TNLNGVYSANEFLTRINLMKAYLF----PEYDTPVRKGQNVIVVGGGNVALDA 297
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV--DVKDNKIA- 219
A SALR GA +V VV+R+ + A EE A EE +F P++ D K N +
Sbjct: 298 ARSALRLGAKQVTVVYRRTEQEMPARREEYIHAVEEGIKFRWLTQPLRYIGDEKGNLVGV 357
Query: 220 ---GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
M+ +++ + + E+ R ++A+ +I A G T + +L K +KL+KYGY
Sbjct: 358 ECISMELGEPDESGRRRPIPIEDSRFVIEADMVIEAIG-TEANRFLLSEFKDLKLNKYGY 416
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
V+ T ATS+ VF GGD + T +E++ GK AA+ I K++Q++ +
Sbjct: 417 IVVDEETCATSLRKVFAGGDIVTGAATVIEAMGAGKRAAYWIDKFLQKEYD 467
>gi|410720209|ref|ZP_11359576.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
Maddingley MBC34]
gi|410601423|gb|EKQ55936.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
Maddingley MBC34]
Length = 301
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 9/197 (4%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D+ ++ + E DALELN+SCPH M G G + GQDP++ R+I V+SSV P
Sbjct: 102 EDFSMVASQVENL-VDALELNVSCPHAM--EGCGASIGQDPDLTRSIVKTVKSSVDTPVI 158
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
KLTPN+T+I +IA+AA +G AD ++ IN++ M + + P + + +GG+SG
Sbjct: 159 AKLTPNVTDIVEIAQAAEQGGADALTLINSLGPGMRIDLE-TAHPILSNR----FGGMSG 213
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVV 756
A +P+ L+ V + + PI+G+GGI + ++F+ AGA VQI +AV V
Sbjct: 214 PAIKPIALRCVYQVHQNV-KIPIMGVGGITNYRDVVEFLYAGASCVQIGTAVMYHGLEVF 272
Query: 757 DDYITGLQTLLYLKSTQ 773
+ TGL+ + K+ Q
Sbjct: 273 REISTGLEKFMKEKNYQ 289
>gi|344255947|gb|EGW12051.1| Dihydropyrimidine dehydrogenase [NADP+] [Cricetulus griseus]
Length = 120
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 66/81 (81%)
Query: 615 QDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLS 674
+DPE+VRNI WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L
Sbjct: 25 RDPELVRNICRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLK 84
Query: 675 ADGNPWPAVGTKKLTTYGGVS 695
ADG PWPAVG K TTYGGVS
Sbjct: 85 ADGTPWPAVGIGKRTTYGGVS 105
>gi|366162677|ref|ZP_09462432.1| hydrogenase, Fe-only [Acetivibrio cellulolyticus CD2]
Length = 1145
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 34/296 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E++++K LGVK+ +SL I +E L KD + A+++ IG NA
Sbjct: 244 IPEYRLPKATLDKEIDIIKSLGVKVMTGKSLGIH-IRLEDLHKD-FDAVYLAIGSWNAT- 300
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
P+ + G + FL +V +++ L VIV+G G+TA DCA
Sbjct: 301 -PMHIEGEKLDGVWLGIQFLEQVTRNAEINL------------GNNVIVIGGGNTAIDCA 347
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK----IA 219
+ALR GA V +V+R+ + A P EV+ A E E L M+P ++ + K
Sbjct: 348 RTALRKGAKSVKLVYRRTQEEMPAEPYEVEEALHEGVEMLFLMAPTKITSEGGKKKLGCI 407
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST----LLDNDVLEAIKPVKLDKYG 275
M +++ + V E I+++A+ II A G + L ND+ PVKL+K+G
Sbjct: 408 KMTLGEPDRSGRRRPVPVEGSDIEIEADTIIGAIGQSTNTQFLYNDL-----PVKLNKWG 462
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTA-----AWHIHKYIQEKN 326
E+N T+ TS +F GGD T +++V+ G+ A ++ + YI+E+N
Sbjct: 463 DVEINGKTLQTSEVNIFAGGDCVTGPATVIQAVSAGRHASDTMDSFLMKGYIKEEN 518
>gi|303257905|ref|ZP_07343914.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderiales
bacterium 1_1_47]
gi|331000430|ref|ZP_08324105.1| pyridine nucleotide-disulfide oxidoreductase [Parasutterella
excrementihominis YIT 11859]
gi|302859248|gb|EFL82330.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderiales
bacterium 1_1_47]
gi|329571762|gb|EGG53442.1| pyridine nucleotide-disulfide oxidoreductase [Parasutterella
excrementihominis YIT 11859]
Length = 661
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IPQYRLP D + E ++ LG K R L +D T++ L +G+ A+FIG+G
Sbjct: 295 IPQYRLPKDILLAEANTIEQLGGKFHYGRRLG-KDFTLDDLFNEGFNAVFIGVGCAKGMK 353
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ + + G+Y FL +V +G P G +V+G G+ A DC+
Sbjct: 354 LGFPEDNEQIEGYYNGLDFLLQVERGVVEG--------EAPSFSGDFVVVGGGNVAMDCS 405
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
SA+R KV V++R+ A P E++ A EE EF + ++ +++ K+ G++
Sbjct: 406 RSAVRMTDGKVHVIYRRTEAQAPADPLEIKAAKEEGIEFHFLTAQKELVLENGKVTGLRC 465
Query: 224 NRT-----EQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
+ E N + + +E + + +ISA G +D + E + DK G
Sbjct: 466 IKLREGAPEANGRRKLIEIPGTEFVIPCSNVISAIGQR-IDQSIFEQKDNILFDKRGNIS 524
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
V ++ATS PGVF GGD A T + + G+TAA IH+Y+
Sbjct: 525 VT-ESLATSRPGVFAGGDCATGPTTLIGGMAQGQTAAESIHEYL 567
>gi|309788035|ref|ZP_07682644.1| uncharacterized protein yeiA [Shigella dysenteriae 1617]
gi|308924169|gb|EFP69667.1| uncharacterized protein yeiA [Shigella dysenteriae 1617]
Length = 411
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+T NI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTLNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 279 LQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>gi|254166940|ref|ZP_04873794.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|289596507|ref|YP_003483203.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|197624550|gb|EDY37111.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|289534294|gb|ADD08641.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
Length = 299
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SI + N +++ L+KK E GADA+ELNLSCPH +G G+ G D E+V I
Sbjct: 93 IIGSIFGS-NPEEFSYLAKKMEDYGADAVELNLSCPHA---KGYGMEVGTDLELVEEIIN 148
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ +VKIP + KLTPN NI +IAKAA AD INT+ M++ D P +
Sbjct: 149 SVKRAVKIPVWAKLTPNTNNIVEIAKAAE--NADAFVLINTLKA-MAIDIDAK-RPVLK- 203
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+GG+SG A +P+G++AV + + PI+G+GGI++ A+++I AGA AV+I
Sbjct: 204 ---NVFGGLSGKAIKPIGVRAVYEVYREIEK-PIIGVGGIENGRDAIEYIMAGASAVEIG 259
Query: 746 SAVQNQDFTV 755
+A+ + V
Sbjct: 260 TALYTRGIEV 269
>gi|170760141|ref|YP_001788137.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A3 str. Loch
Maree]
gi|169407130|gb|ACA55541.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A3 str. Loch Maree]
Length = 411
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + + PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLKDVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I GL +
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLSYYM 304
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V +++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFDEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T+ G F N+E I+E +
Sbjct: 62 ---TNLEKEGTPFLGFKNMEQIAEHS 84
>gi|197116421|ref|YP_002136848.1| putative oxidoreductase [Geobacter bemidjiensis Bem]
gi|197085781|gb|ACH37052.1| NADH-dependent ferredoxin:NADP+ oxidoreductase, alpha subunit
[Geobacter bemidjiensis Bem]
Length = 469
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 148/290 (51%), Gaps = 23/290 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ EV ++ +GV IEC + + +TI +LR + + A+FI N
Sbjct: 192 IPEFRLPKEIIDREVAVLSRMGVAIECNVIIG-KTLTIPQLRSE-FDAVFIA----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTAF 160
+P + E G Y + FL RV G S PIL + V V+G G+TA
Sbjct: 246 LPTMLNIMGENLKGVYAANEFLTRVNLME----AGRRADSSTPILQRDEVAVIGGGNTAM 301
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIA 219
DC +A R GA + ++V+R+ T + A EE++ A EE EF+ +PV V +D ++
Sbjct: 302 DCVRTARRLGAKRAMIVYRRSETEMPARVEEIKHAKEEGVEFIMLTAPVAIVATEDGWVS 361
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
++ + E + Q I+ L A +I+A G++ N +L A P + L+K
Sbjct: 362 ALRCQKMELGPADDSGRRRPQAIEGSEFDLPAGIVINAVGTSA--NPLLTATAPDLTLNK 419
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
+G N TS+PGVF GGD T + ++ DGK AA I KY++
Sbjct: 420 WGNIVTN-DEGETSIPGVFAGGDIVRGGATVILAMGDGKRAAAAIDKYLK 468
>gi|389580123|ref|ZP_10170150.1| NADPH-dependent glutamate synthase, homotetrameric [Desulfobacter
postgatei 2ac9]
gi|389401758|gb|EIM63980.1| NADPH-dependent glutamate synthase, homotetrameric [Desulfobacter
postgatei 2ac9]
Length = 467
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 21/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V EV ++ +G KIEC + +T+++L +GY A++IG+G
Sbjct: 186 IPEFRLPKEIVASEVATLEKMGAKIECNTVIGA-TVTVDELFDEGYDAVYIGVGAG---- 240
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAF 160
+P F L E +G Y++ +L R T+ KG K PI +G V+VLGAG+ A
Sbjct: 241 LPKFMNLPGENLIGIYSANEYLTR--TNLMKGYL--FPKYDTPIARGKHVVVLGAGNVAM 296
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
D A +A+R GA V VV+R+ + A EE+ A EEK EF+ +P Q +N ++
Sbjct: 297 DSARTAMRLGAESVKVVYRRSRDEMPARNEELHHAEEEKIEFMLLTNPTQFLGDENGRLT 356
Query: 220 GMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
GM+ + E + + V E K++ + ++ A GS N +L P + L+K
Sbjct: 357 GMECLKMELGDPDASGRRRPVPIEGSEFKIECDLVVVAAGSNA--NPLLTNSTPDLNLNK 414
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+G N TS V+ GGD + T + ++ G+ AA IH Y+
Sbjct: 415 WGNIVANPVNGKTSKRAVWAGGDIVTGAATVILAMGAGRAAATSIHAYL 463
>gi|148544533|ref|YP_001271903.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri DSM 20016]
gi|184153896|ref|YP_001842237.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri JCM 1112]
gi|227363039|ref|ZP_03847176.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri MM2-3]
gi|325682854|ref|ZP_08162370.1| dihydroorotate dehydrogenase [Lactobacillus reuteri MM4-1A]
gi|148531567|gb|ABQ83566.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus reuteri
DSM 20016]
gi|183225240|dbj|BAG25757.1| putative oxidoreductase [Lactobacillus reuteri JCM 1112]
gi|227071923|gb|EEI10209.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri MM2-3]
gi|324977204|gb|EGC14155.1| dihydroorotate dehydrogenase [Lactobacillus reuteri MM4-1A]
Length = 432
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM +DW L+K + GAD +ELN SCP M MG G +PE+ +
Sbjct: 105 VLIASIM-GETLEDWTNLAKLVTETGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKKNC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNIT + + KA EG ADG SAINTV ++ + P +
Sbjct: 163 EAVKRGTSLPVLAKMTPNITTMVPVVKACLEGGADGFSAINTVKSIVDVDLKKKVGLPNI 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSI--AKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G+SG A +P+ L+ + + A PI GIGGI++ + A +FI GA
Sbjct: 223 DGK--SSVSGLSGKAVKPIALRFLQQLRSAAGLEQLPISGIGGIETWEDAAEFILLGATT 280
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + ++DD GL +
Sbjct: 281 LQVTTAIMEYGYRIIDDLTNGLMHYM 306
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 472 LQNGLPKRQINTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYM 531
L NGL V+ ++D++G A + + +LD +V I+ D CI CG+C++
Sbjct: 298 LTNGLMHYMEEQHVD---HLQDLVGLANKNIIPTNQLDRNYKVYPKIDWDKCIGCGRCFI 354
Query: 532 ACNDSGYQAITFHPETHQ-AHVTDECTGCTLC 562
+C D +QA+T+ E Q +C GC LC
Sbjct: 355 SCQDGAHQALTWDDEKRQPVFDKSKCVGCQLC 386
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV+ G+ F NPF L+S+P M + A++ GWG V KT S + VSPR
Sbjct: 5 DLSVDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPTHFKIDEVSPRFD 64
Query: 407 K-GTTSRHLYGPEQGSFLNIELISE 430
+ H +F N+E +SE
Sbjct: 65 ELAKEDMHFV-----AFKNMEQLSE 84
>gi|170754614|ref|YP_001782424.1| dihydropyrimidine dehydrogenase [Clostridium botulinum B1 str.
Okra]
gi|429244891|ref|ZP_19208310.1| dihydropyrimidine dehydrogenase subunit B [Clostridium botulinum
CFSAN001628]
gi|169119826|gb|ACA43662.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
B1 str. Okra]
gi|428758081|gb|EKX80534.1| dihydropyrimidine dehydrogenase subunit B [Clostridium botulinum
CFSAN001628]
Length = 411
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + + PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLKSVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I GL +
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLSYYM 304
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E I+E +
Sbjct: 62 ---DNLQKEGTSFLGFKNMEQIAEHS 84
>gi|313124210|ref|YP_004034469.1| dihydroorotate oxidase b, catalytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280773|gb|ADQ61492.1| Dihydroorotate oxidase B, catalytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 309
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 117/192 (60%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E+++ A DALELNLSCP+ + E GM G PEMV I+ V+ V +P +
Sbjct: 110 EDYVEVAEILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMVEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT+ GL + L P +G +GG+S
Sbjct: 167 VKLTPNVTSIVEIAQAAERGGADGLTLINTLLGLHLDLKTR---RPVLGND----FGGLS 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + + + PI+G+GGI+S + +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAIRMVAQV-RQTTSLPIIGVGGINSPEDTAEFILAGASAVQIGS-MAFHDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|187778598|ref|ZP_02995071.1| hypothetical protein CLOSPO_02193 [Clostridium sporogenes ATCC
15579]
gi|187772223|gb|EDU36025.1| dihydropyrimidine dehydrogenase [Clostridium sporogenes ATCC 15579]
Length = 411
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL++ + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELARLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASMEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + + PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLKDIPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + +V+D I GL +
Sbjct: 279 LQVTTAIMQYGYRIVEDMIEGLSYYM 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + E +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDVENRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFF--IAKEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T+ G F N+E I+E +
Sbjct: 62 ---TNLEKEGTPFLGFKNMEQIAEHS 84
>gi|383319445|ref|YP_005380286.1| dihydroorotate oxidase B, catalytic subunit [Methanocella conradii
HZ254]
gi|379320815|gb|AFC99767.1| dihydroorotate oxidase B, catalytic subunit [Methanocella conradii
HZ254]
Length = 306
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 129/226 (57%), Gaps = 14/226 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI N+ ++ E+++ GA A ELN+SCPH +G G+ G DP +V ++
Sbjct: 94 VIASIFGA-NEAEFREVAEGLP--GASAYELNVSCPHA---KGYGMQLGTDPALVEAVTR 147
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ +V +P +VKLTPN+T+IT I +AA +G AD V AINTV M++ D +P +G
Sbjct: 148 AVKGAVDVPVWVKLTPNVTDITAIGRAAQDGGADAVVAINTVKA-MTIDIDSG-YPILG- 204
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ +K V + + + P++G+GGI + A++F+ AGA AV+I
Sbjct: 205 ---NISGGLSGPAIKPIAVKCVYELYEAL-DIPVIGVGGISNWADAVEFLMAGASAVEIG 260
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGK 791
SAV + V GL L K+ +L+ G S H+ K
Sbjct: 261 SAVYD-GLEVFASVSMGLSDYLERKNMKLEDLVGLSHRVVKHEAHK 305
>gi|374635910|ref|ZP_09707498.1| dihydroorotate dehydrogenase family protein [Methanotorris
formicicus Mc-S-70]
gi|373560793|gb|EHP87046.1| dihydroorotate dehydrogenase family protein [Methanotorris
formicicus Mc-S-70]
Length = 304
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 122/217 (56%), Gaps = 16/217 (7%)
Query: 566 LIASIMCTYNKDD--WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I SI Y KD+ + ++++ E D +ELN+SCPH G G G GQDP + +
Sbjct: 97 IIGSI---YGKDEKEFAIVAERIENY-VDMIELNISCPHAGG--GYGATIGQDPNLSYKV 150
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
V+ +VKIP F KLTPN+T+I +IAKA + DG++AINT+ M + + V
Sbjct: 151 VASVKDAVKIPVFAKLTPNVTDIKEIAKAVVDAGVDGITAINTLGPGMVIDIE------V 204
Query: 684 GTKKLTT-YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
G L+ +GG+SG +P+ +K V + + + PI+G+GGI + AL+FI AGA AV
Sbjct: 205 GKPILSNKFGGMSGKTIKPIAIKIVYDLYETV-DVPIIGVGGITTGRDALEFIMAGACAV 263
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDG 779
Q+ + V + + + ++ L K+ +LK G
Sbjct: 264 QVGTGVYYRGYDIFRKICEEMEMFLKEKNVKLKDLIG 300
>gi|387819085|ref|YP_005679432.1| dihydropyrimidine dehydrogenase [NADP+] [Clostridium botulinum
H04402 065]
gi|322807129|emb|CBZ04703.1| dihydropyrimidine dehydrogenase [NADP+] [Clostridium botulinum
H04402 065]
Length = 411
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDGRLKSVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I GL +
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLSYYM 304
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E I+E +
Sbjct: 62 ---DNLQKEGTSFLGFKNMEQIAEHS 84
>gi|148380778|ref|YP_001255319.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A str. ATCC
3502]
gi|153931280|ref|YP_001385063.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A str. ATCC
19397]
gi|153934691|ref|YP_001388532.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A str. Hall]
gi|148290262|emb|CAL84382.1| putative iron-sulfur oxidoreductase [Clostridium botulinum A str.
ATCC 3502]
gi|152927324|gb|ABS32824.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A str. ATCC 19397]
gi|152930605|gb|ABS36104.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A str. Hall]
Length = 411
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+ +W EL+K + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEKEWEELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + D +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDGRLKSVPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +V+D I GL +
Sbjct: 279 LQVTTAVMQYGYRIVEDMIEGLSYYM 304
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + + +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDGKNRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
+ G F N+E I+E +
Sbjct: 62 ---DNLEKEGTSFLGFKNMEQIAEHS 84
>gi|333999853|ref|YP_004532465.1| dihydroorotate oxidase [Treponema primitia ZAS-2]
gi|333740352|gb|AEF85842.1| dihydroorotate oxidase [Treponema primitia ZAS-2]
Length = 500
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM N+D+W L+ EKAG D +E N SCPH M G+G GQ+P++V +
Sbjct: 197 VIVASIM-GENEDEWTSLAADCEKAGVDIIECNFSCPH-MSANGLGSDVGQNPDLVAAFT 254
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
VR ++P K+TPN+ ++ AKAA + ADG++AINTV +
Sbjct: 255 AAVRRGTRLPILAKMTPNLGSMVPPAKAALQNGADGIAAINTVKSFTGFNHQTLKALLDV 314
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN---FPILGIGGIDSADVALQFIQAGAHA 741
T K + G SG A +P+ L+ +S + K +P+ P+ G+GGI++ AL F+ G
Sbjct: 315 TGK-SAVSGYSGKAIKPIALRFISEL-KTYPSTAAAPLSGMGGIENWQDALDFLLMGCGN 372
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+QI +AV + ++D GL +
Sbjct: 373 LQITTAVMQYGYRIIDPLKAGLAAFM 398
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
V +++G+ + ELD + V I+ + C++CG+C+++CND G+QA+ + +
Sbjct: 406 VSEIVGRGIGVFAPAGELDRETTVRPKIDGERCVSCGRCFVSCNDGGHQAVLWDTKKRMP 465
Query: 551 HV-TDECTGCTLCLSILIASIM 571
+ T +C GC LCL + +S +
Sbjct: 466 KIDTSKCVGCHLCLYVCPSSAI 487
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ CG+ NPF L+S+ M RA + GWG V KT + + +SPR
Sbjct: 99 DLSIDFCGIPCENPFFLSSSIVAGNYEMCARALDRGWGGIVYKTIGM--GTIRELSPRF- 155
Query: 407 KGTTSRHLYGPEQGSFL---NIELISEKTAFIFFFLFQAIPNFGEYKKIREN 455
+ E+ SF+ N+E IS++ N + K+++EN
Sbjct: 156 ------DVLNKERTSFVGFRNLEQISDR---------PLKDNLADLKRLKEN 192
>gi|322417564|ref|YP_004196787.1| glutamate synthase (NADPH), homotetrameric [Geobacter sp. M18]
gi|320123951|gb|ADW11511.1| glutamate synthase (NADPH), homotetrameric [Geobacter sp. M18]
Length = 469
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 25/291 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFI--GIGKPNA 101
IP++RLP + ++ EV ++ +LGV IEC + + +TI +LR+D + A+FI G G P
Sbjct: 192 IPEFRLPKEIIDREVAVLSELGVTIECNVIIG-KTLTIAELRRD-FDAVFIANGAGLPTM 249
Query: 102 NVIPIFQGLTEEM-GFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTA 159
IP E + G Y + FL RV G + S PIL + V V+G G+TA
Sbjct: 250 LNIP-----GENLKGVYAANEFLTRVNLME----AGRKEDSSTPILQRDEVAVIGGGNTA 300
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKI 218
DC +A R GA + ++++R+G + A EE++ A EE EF+ +P+ V +D +
Sbjct: 301 MDCVRTARRLGAKRAMIIYRRGEAEMPARVEEIKHAKEEGVEFVMLTAPLAIVGSEDGWV 360
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRI-----KLKANYIISAFGSTLLDNDVLEAIKP-VKLD 272
+ ++ + E + Q I + A +I+A G+ N +L A P + L+
Sbjct: 361 SALRCQKMELGPADDSGRRRPQPIDGSEFDIPAGIVINAVGTNA--NPLLTATAPDLALN 418
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
K+G + TS+PGVF GGD T + ++ DGK AA I+ Y++
Sbjct: 419 KWGNI-LTSNEGETSIPGVFAGGDIVRGGATVILAMGDGKHAAAAINDYLK 468
>gi|26344273|dbj|BAC35793.1| unnamed protein product [Mus musculus]
Length = 199
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 438 FLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQ 497
+ Q +P+FG Y + R+ +I +++ + + + L ++ N+ + I ++KDVIG+
Sbjct: 45 LMGQKLPSFGPYLEQRKKIIAASKIRQKDQNTAC--SPLQRKHFNS-QKPIPAIKDVIGK 101
Query: 498 AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECT 557
++Q + + E+ +QVVAL++++MCINCGKCYM CNDSGYQAI F PETH V+D CT
Sbjct: 102 SLQYLGTFGEMSIMEQVVALVDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCT 161
Query: 558 GCTLCLSI 565
GCTLCLS+
Sbjct: 162 GCTLCLSV 169
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 756 VDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIR 814
++DY TGL+ LLYLKS + L WDGQSPP HQKGKP + + G+ +P+FG Y + R
Sbjct: 1 IEDYCTGLKALLYLKSIEELADWDGQSPPIISHQKGKPVPRVAELMGQKLPSFGPYLEQR 60
Query: 815 ENLITELNLKKLNSD 829
+ +I +++ + +
Sbjct: 61 KKIIAASKIRQKDQN 75
>gi|435851007|ref|YP_007312593.1| dihydroorotate dehydrogenase family protein [Methanomethylovorans
hollandica DSM 15978]
gi|433661637|gb|AGB49063.1| dihydroorotate dehydrogenase family protein [Methanomethylovorans
hollandica DSM 15978]
Length = 299
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 117/215 (54%), Gaps = 16/215 (7%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI N +++ +++ DA ELN+SCPH MG G + G DP MV+ ++
Sbjct: 91 VIASIFGG-NPEEFRMVAEGLIPGKPDAFELNVSCPHAMG---YGASVGTDPAMVKAVTS 146
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+ IP +VKLTPN+T+I I KAA G AD V AINTV G+ G +P +G
Sbjct: 147 AICEVTDIPVWVKLTPNVTDIVTIGKAAQAGGADAVVAINTVRGMAIDIHSG--YPVLGN 204
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ +GG+SG A RP+ +K V + + PI+G+GGI + A++ I AGA AVQI
Sbjct: 205 R----FGGLSGEAVRPVAVKCVYDLYANL-DIPIIGVGGISTWQHAVEMIMAGASAVQIG 259
Query: 746 SAVQNQDFTVVDDYITGLQTLL----YLKSTQLKG 776
S V + V D G+ L Y K+ + G
Sbjct: 260 SGVY-EGLNVFSDINAGINRFLKEHGYTKTEDITG 293
>gi|452077283|gb|AGF93247.1| dihydroorotate dehydrogenase family protein [uncultured organism]
Length = 302
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI + + +++++++ A D ELN+SCPH G G G D +V I+
Sbjct: 94 IIASIFAG-DTEGFVKVAEELSSANPDGFELNVSCPHA---EGYGATIGCDSCLVEEITA 149
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNP-WPAVG 684
V + +P +VKLTPN+TNI DI KAA G AD V AINTV G +S D N +P +G
Sbjct: 150 SVCDVIDVPVWVKLTPNVTNIVDIGKAAERGGADAVVAINTVRG---MSIDINTGYPILG 206
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ YGG+SG A RP+ +K V + + P++G+GG+ A++ I AGA AVQ+
Sbjct: 207 NR----YGGLSGRAIRPIAVKCVYDLYASL-DIPVVGVGGVSCWQDAVEMIMAGASAVQV 261
Query: 745 CSAVQNQDFTVVDDYITGLQTLL 767
SAV +Q V +G++ L
Sbjct: 262 GSAV-SQSMDVFKSISSGIEDYL 283
>gi|424835124|ref|ZP_18259794.1| dihydropyrimidine dehydrogenase subunit B [Clostridium sporogenes
PA 3679]
gi|365978251|gb|EHN14343.1| dihydropyrimidine dehydrogenase subunit B [Clostridium sporogenes
PA 3679]
Length = 411
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+L+ASIM N+++W EL++ + GAD +E N SCP M MG GQ+P++V+
Sbjct: 103 VLVASIM-GQNEEEWKELARLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
VR IP K+TPNI +++ A A+ EG A G++ INT+ + + + +P V
Sbjct: 161 EAVRRGTDIPILAKMTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLNKFIGYPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIA--KMFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ + + + + PI GIGGI++ + A +FI G+
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQLVTDERLKDIPISGIGGIETWEDAAEFILLGSRN 278
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +A+ + +V+D I GL +
Sbjct: 279 LQVTTAIMQYGYRIVEDMIEGLSYYM 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 491 VKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQA 550
++D++G A + + +LD V N++ C+ CG+CY++C D G+QAI + E +
Sbjct: 312 LEDMVGLANKNIIPAEDLDRGYIVYPKFNEENCVGCGRCYISCYDGGHQAIKWDVENRKP 371
Query: 551 HVTDE-CTGCTLCLSI 565
+ E C GC LC ++
Sbjct: 372 ILEKENCVGCHLCANV 387
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+E CG+K NPF L+S+P M +A E GWG V KT + VSPR
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQGSFLNIELISEKT 432
T+ G F N+E I+E +
Sbjct: 62 ---TNLEKEGAPFLGFKNMEQIAEHS 84
>gi|240102458|ref|YP_002958767.1| putative oxidoreductase [Thermococcus gammatolerans EJ3]
gi|239910012|gb|ACS32903.1| Glutamate synthase (NADPH), homotetrameric (gltA) [Thermococcus
gammatolerans EJ3]
Length = 471
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 159/290 (54%), Gaps = 19/290 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ E+ +K LGV+I+ + + R +TIE+L K+ Y A+FIG G +
Sbjct: 191 IPEFRLPKEILDHELAKLKRLGVEIKTDHVVG-RTVTIEELLKE-YDAVFIGTGAGTPKL 248
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ I L + + Y++ FL R+ + PI G VIV+GAG+TA D
Sbjct: 249 LNIPGILLDRI--YSANEFLTRINLMKAYEF----PEYDTPIAVGKKVIVIGAGNTAMDA 302
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR G + V + +R+G ++ A EEV+ A EE +FL F+ PV+ + ++ K+ +
Sbjct: 303 ARSALRLGCD-VTIAYRRGEEDVTARIEEVEHAKEEGVKFLYFVQPVEFIGDENGKVKAV 361
Query: 222 QFNRTE----QNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
+F + E ++ +G+ + + I ++A+ +I A G L N ++ +K + G
Sbjct: 362 KFEKMEPLEERDRRGKRKIRPTGEYITVEADTVIIAIG--LEPNRIISEESGLKTNPNGT 419
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DGK AA I +Y++ K
Sbjct: 420 LVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKRAAKAIDEYVRAKK 468
>gi|118581236|ref|YP_902486.1| putative oxidoreductase [Pelobacter propionicus DSM 2379]
gi|118503946|gb|ABL00429.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Pelobacter
propionicus DSM 2379]
Length = 469
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 22/291 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP D ++ EV ++ LGVKIE + + +T+ +L+ + + A+FI N
Sbjct: 192 IPEFRLPNDIIDAEVNCLRTLGVKIELNVIIG-KTLTLPQLQAE-FDALFIA----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P+ + E G Y + +L RV G + + PI+KG V V+G G+TA
Sbjct: 246 LPVMLNIPGENLKGVYAANEYLTRVNLMG----AGRSQDAATPIIKGKNVTVIGGGNTAM 301
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DC +A R GA + ++V+R+ + A EE++ A EE EFL +PV + ++ +A
Sbjct: 302 DCVRTAKRLGAERAMIVYRRTEAEMPARAEEIKHAKEEGVEFLLLTAPVAILDENGWVAK 361
Query: 221 MQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKY 274
+ E E + V + L A+ +++A G+ N +L A P +KL+++
Sbjct: 362 LSCQHMELGEPDDSGRRRPVPVDGAYFDLPADVVVNAIGTRA--NPLLTATAPDLKLNRW 419
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
G + + + TS+ GVF GGD T + ++ DGK AA I++Y+ K
Sbjct: 420 GNIQTDENGL-TSLEGVFAGGDIVRGGATVILAMGDGKQAAAAINRYLASK 469
>gi|282163659|ref|YP_003356044.1| glutamate synthase [Methanocella paludicola SANAE]
gi|282155973|dbj|BAI61061.1| glutamate synthase [Methanocella paludicola SANAE]
Length = 468
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 21/294 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EVE VK LGV+I S+ + ITI+++ GY A+F+G G
Sbjct: 186 IPEFRLPKAIVEKEVEYVKGLGVEIRL-NSIIGKTITIDEIFAQGYEAVFVGSGAG---- 240
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F + E G Y++ FL RV + K + P+ +G +V V+G G+ A
Sbjct: 241 LPTFMHIPGENLNGVYSANEFLTRV--NLMKAFL--FPEYDTPLKRGKSVAVVGGGNVAM 296
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A +A R GA V +++R+G + A EE++ A EE EF M+P ++ +VK
Sbjct: 297 DAARTAKRLGAEHVYLIYRRGEEEMPARREELEHAKEEGIEFKLLMNPTKIIGDDKRNVK 356
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ +++ + V E L + +I A G++ N ++ P +K K
Sbjct: 357 AIECVCMELGPPDESGRRSPVCKEGSETTLDVDTVIIAIGTS--PNPLIVKTTPGLKTGK 414
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
+G EV T TS GVF GGD + + T + ++ K AA I +YIQ K+N
Sbjct: 415 HGVLEVEPYTFKTSREGVFAGGDIVSGAATVISAMGQAKEAARAIDEYIQNKDN 468
>gi|125975483|ref|YP_001039393.1| ferredoxin [Clostridium thermocellum ATCC 27405]
gi|125715708|gb|ABN54200.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Clostridium thermocellum ATCC 27405]
Length = 493
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 138/270 (51%), Gaps = 29/270 (10%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E+E++K LGVKI E++L I +E L KD + A+++ IG A
Sbjct: 245 IPEYRLPKAILDKEIEMIKKLGVKIMTEKALGIH-IRLEDLSKD-FDAVYLAIGSWQAT- 301
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
P+ + G + +L +VA K +P L V+V+G G+TA DCA
Sbjct: 302 -PMHIEGEKLDGVWAGINYLEQVA-----------KNVDIP-LGDNVVVIGGGNTAIDCA 348
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK----IA 219
+ALR GA V +V+R + A P EV+ A E E + M+P ++ VKD K
Sbjct: 349 RTALRKGAKSVKLVYRCTREEMPAAPYEVEEAIHEGVEMIFLMAPTKIIVKDGKKKLVCI 408
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST----LLDNDVLEAIKPVKLDKYG 275
MQ +++ + V E +++ A+ II A G + L ND+ PVKL+K+G
Sbjct: 409 RMQLGEPDRSGRRRPVPIEGSEVEIDADTIIGAIGQSTNTQFLYNDL-----PVKLNKWG 463
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTV 305
EVN T+ TS +F GGD T +
Sbjct: 464 DIEVNGKTLQTSEYNIFAGGDCVTGPATVI 493
>gi|298674196|ref|YP_003725946.1| dihydroorotate dehydrogenase family protein [Methanohalobium
evestigatum Z-7303]
gi|298287184|gb|ADI73150.1| dihydroorotate dehydrogenase family protein [Methanohalobium
evestigatum Z-7303]
Length = 302
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI + + +++++++ A D ELN+SCPH G G G D +V I+
Sbjct: 94 IIASIFAG-DTEGFVKVAEELSSANPDGFELNVSCPHA---EGYGATIGCDSCLVEEITA 149
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNP-WPAVG 684
V + +P +VKLTPN+TNI DI KAA G AD V +INTV G +S D N +P +G
Sbjct: 150 SVCDVIDVPVWVKLTPNVTNIVDIGKAAERGGADAVVSINTVRG---MSIDINTGYPILG 206
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ YGG+SG A RP+ +K V + + P++G+GG+ A++ I AGA AVQ+
Sbjct: 207 NR----YGGLSGRAIRPIAVKCVYDLYASL-DIPVVGVGGVSCWQDAVEMIMAGASAVQV 261
Query: 745 CSAVQNQDFTVVDDYITGLQTLL 767
SAV +Q V +G++ L
Sbjct: 262 GSAV-SQSMDVFKSISSGIEDYL 283
>gi|189174469|gb|ACD81472.1| glutamate synthase small subunit-like protein II [Pyrococcus
horikoshii]
Length = 476
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 164/291 (56%), Gaps = 20/291 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E++ + LGVKI+ + + R +TI +L K+ Y AIFIG G +
Sbjct: 197 IPEFRLPKEILRKELKKLSILGVKIKTDHIVG-RTVTIPELLKE-YDAIFIGTGAGTPKL 254
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
+ I G+ G Y++ FL R+ + PI+ G VIV+GAG+TA D
Sbjct: 255 LKI-PGINLN-GIYSANEFLTRINLMKAYKF----PEYDTPIIVGKRVIVIGAGNTAMDA 308
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V++ +R+G ++ A EEVQ A EE +F+ F++PV+ + ++ ++ +
Sbjct: 309 ARSALRLGA-EVIIAYRRGEEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDENGRVKAV 367
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKYG 275
+F + E++ +G+ + + + ++ + ++ A G T N ++ P +K+ + G
Sbjct: 368 KFEKMKPLEERDSRGKRKIIGTGEYVTVETDTVVIAIGQT--PNRIIWKTTPGLKVRENG 425
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +K+
Sbjct: 426 TIVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKKS 475
>gi|14591620|ref|NP_143702.1| oxidoreductase [Pyrococcus horikoshii OT3]
gi|3258312|dbj|BAA30995.1| 476aa long hypothetical glutamate synthase small chain [Pyrococcus
horikoshii OT3]
Length = 476
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 164/291 (56%), Gaps = 20/291 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E++ + LGVKI+ + + R +TI +L K+ Y AIFIG G +
Sbjct: 197 IPEFRLPKEILRKELKKLSILGVKIKTDHIVG-RTVTIPELLKE-YDAIFIGTGAGTPKL 254
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
+ I G+ G Y++ FL R+ + PI+ G VIV+GAG+TA D
Sbjct: 255 LKI-PGINLN-GIYSANEFLTRINLMKAYKF----PEYDTPIIVGKRVIVIGAGNTAMDA 308
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V++ +R+G ++ A EEVQ A EE +F+ F++PV+ + ++ ++ +
Sbjct: 309 ARSALRLGA-EVIIAYRRGEEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDENGRVKAV 367
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKYG 275
+F + E++ +G+ + + + ++ + ++ A G T N ++ P +K+ + G
Sbjct: 368 KFEKMKPLEERDSRGKRKIIGTGEYVTVETDTVVIAIGQT--PNRIIWKTTPGLKVRENG 425
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +K+
Sbjct: 426 TIVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSKKS 475
>gi|254168949|ref|ZP_04875788.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|197622055|gb|EDY34631.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
Length = 299
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SI + N +++ L+KK E GADA+ELNLSCPH +G G+ G D ++V I
Sbjct: 93 IIGSIFGS-NAEEFSYLAKKMEDYGADAVELNLSCPHA---KGYGMEVGTDLDLVEEIIN 148
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ +VKIP + KLTPN NI +IAKAA AD INT+ M++ D P +
Sbjct: 149 SVKRAVKIPVWAKLTPNTNNIVEIAKAAE--NADAFVLINTLKA-MAIDIDAK-RPVLK- 203
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+GG+SG A +P+G++AV + + PI+G+GGI++ A++++ AGA AV+I
Sbjct: 204 ---NVFGGLSGKAIKPIGVRAVYEVYREVEK-PIIGVGGIENGRDAIEYMMAGASAVEIG 259
Query: 746 SAVQNQDFTV 755
+A+ + V
Sbjct: 260 TALYTRGIEV 269
>gi|326789659|ref|YP_004307480.1| dihydroorotate dehydrogenase [Clostridium lentocellum DSM 5427]
gi|326540423|gb|ADZ82282.1| dihydroorotate dehydrogenase family protein [Clostridium
lentocellum DSM 5427]
Length = 494
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ASIM T N+++W L++ +AGAD +E N SCPH M G+G GQ+P +V +
Sbjct: 200 VIVASIMGT-NEEEWTYLARIVTEAGADIIECNFSCPH-MATDGLGSDVGQNPFLVATYT 257
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPN+ ++ A AA E A G++AINT+ +M++ + P V
Sbjct: 258 KATRKGTHLPILAKMTPNLGHMEIPALAAMEAGATGIAAINTIKSIMNVDLESFCSGPKV 317
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKM--FPNFPILGIGGIDSADVALQFIQAGAHA 741
K T+ GG SG A +P+ L+ + + PI G+GGI++ A +F+ G
Sbjct: 318 RGK--TSVGGYSGKAVKPIALRFIYEMKSHEGLRKTPISGMGGIETWKDAAEFLALGCEN 375
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ +AV + +++D I G++ L
Sbjct: 376 LQVTTAVMQYGYRIIEDLIEGMKFYL 401
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+ +++G+A++ + ELD N C+ CG+CY++C D G+QA+ P + +
Sbjct: 408 SISEIVGKAIEHIVPGDELDRDSICYPKFNKSKCVGCGRCYLSCYDGGHQALEQEPGSGK 467
Query: 550 A-HVTDECTGCTLC 562
+ +C GC LC
Sbjct: 468 PILIASKCVGCHLC 481
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
VD+S+ CG+ NPF L+S+ + MV RAFE GW KT + + VSPR
Sbjct: 101 VDLSITFCGVPCENPFFLSSSVVGSNYEMVARAFEMGWAGVAFKT--IGNFVPKEVSPRF 158
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEKT 432
T P G F NIE IS+ T
Sbjct: 159 DALTKESV---PFVG-FKNIEQISDHT 181
>gi|227543831|ref|ZP_03973880.1| dihydroorotate oxidase [Lactobacillus reuteri CF48-3A]
gi|338203623|ref|YP_004649768.1| dihydroorotate oxidase [Lactobacillus reuteri SD2112]
gi|112943111|gb|ABI26297.1| dihydroorotate dehydrogenase [Lactobacillus reuteri]
gi|227186208|gb|EEI66279.1| dihydroorotate oxidase [Lactobacillus reuteri CF48-3A]
gi|336448863|gb|AEI57478.1| dihydroorotate oxidase [Lactobacillus reuteri SD2112]
Length = 308
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 115/179 (64%), Gaps = 18/179 (10%)
Query: 574 YNKDDWLEL-SKKTEKAGADALELNLSCP---HGMGERGMGLACGQDPEMV-RNISLWVR 628
+++D+++++ S+ AG A+ELN+SCP HG G+A G DPE++ R + V+
Sbjct: 108 FSEDEYVKVVSEFANTAGVKAIELNVSCPNVKHG------GMAMGTDPEVLQRLVKQVVK 161
Query: 629 SSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKL 688
+++ IP +VKLTPN+TNI +A+AA EG A+G++ INT++GL P A
Sbjct: 162 AALGIPIYVKLTPNVTNIVPLAQAAEEGGANGLTMINTLTGLSIDLKTRRPALA------ 215
Query: 689 TTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ L+ + + + + PI+G+GGI+SA+ L+F+ AGA+AVQI +A
Sbjct: 216 NVTGGLSGPAIKPLALRMIHQV-RQVSSLPIIGVGGIESAEDVLEFMMAGANAVQIGAA 273
>gi|374294569|ref|YP_005044760.1| NADPH-dependent glutamate synthase, homotetrameric [Clostridium
clariflavum DSM 19732]
gi|359824063|gb|AEV66836.1| NADPH-dependent glutamate synthase, homotetrameric [Clostridium
clariflavum DSM 19732]
Length = 464
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 146/293 (49%), Gaps = 21/293 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V E++LVK LGV+I+ + + T+++L +GY AIFI G
Sbjct: 183 IPEFRLPKELVQKEIDLVKRLGVEIKTNMVIG-KVFTLDELFNEGYKAIFIASGAG---- 237
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F G+ E G Y++ FL R+ P+ G TV V+G G+ A
Sbjct: 238 LPSFLGIEGENLNGVYSANEFLTRINLMKAYKF----PDNDTPVKVGKTVAVVGGGNVAM 293
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNKIA 219
D A SA R GA+ V V++R+ + A EE+ A EE F +PV++ +D +
Sbjct: 294 DAARSAKRLGADNVYVIYRRSEEEMPARLEEIHHAKEEGIIFKLLTNPVRIIGTEDGWVK 353
Query: 220 GMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
GM+ E E + + V + + +I A G T N ++ + P + K
Sbjct: 354 GMECIEMELGEPDASGRKKPVPKPNSEHVIDVDTVIIAIGQT--PNPLITSTTPGLTTQK 411
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
+G VN T+ATS PGVF GGD + T + ++ GK AA I +YIQ KN
Sbjct: 412 WGGIIVNEETLATSKPGVFAGGDAVTGAATVILAMGAGKKAAKAIDQYIQSKN 464
>gi|116514463|ref|YP_813369.1| dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|418029674|ref|ZP_12668206.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|116093778|gb|ABJ58931.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|354689434|gb|EHE89426.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 309
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E+++ A DALELNLSCP+ + E GM G PEMV I+ V+ V +P +
Sbjct: 110 EDYVEVAEILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMVEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT L+ L D P +G +GG+
Sbjct: 167 VKLTPNVTSIVEIAQAAEGGGADGLTLINT---LLVLHLDLKTRRPVLGND----FGGLY 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + K + PI+G+GGI+S + A +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAVRMVAQV-KQATSLPIIGVGGINSPEDAAEFILAGASAVQIGS-MSFYDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|406664672|ref|ZP_11072447.1| Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Bacillus isronensis B3W22]
gi|405387520|gb|EKB46944.1| Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Bacillus isronensis B3W22]
Length = 303
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 578 DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D++E++ + KA ALELN+SCP+ + G+ G DPE R ++ V++ +P +
Sbjct: 107 DYVEVADRISKASNVKALELNISCPN---VKCGGIQFGTDPETARQLTAAVKAVSSVPVY 163
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKL+PN+TNI DIAKA G ADG++ INT+ G+ G P A GT GG+SG
Sbjct: 164 VKLSPNVTNIVDIAKAVEAGGADGITMINTLVGMRLDERTGKPVIANGT------GGLSG 217
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF--- 753
A +P+ ++ V + K N PI+G+GG+ A + F+ AGA AV + +A F
Sbjct: 218 PAIKPVAIRMVYDVYKAV-NIPIIGMGGVTCAQDVIDFMSAGASAVAVGTANFVDHFVCP 276
Query: 754 TVVDDYITGLQTLLYLKSTQLKG 776
T++++ L TL + +++ G
Sbjct: 277 TIIEELPVLLDTLNVKRISEIIG 299
>gi|418035731|ref|ZP_12674178.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354689585|gb|EHE89569.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 309
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E+++ A DALELNLSCP+ + E GM G PEMV I+ V+ V +P +
Sbjct: 110 EDYVEVAEILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMVEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT L+ L D P +G +GG+
Sbjct: 167 VKLTPNVTSIVEIAQAAEGGGADGLTLINT---LLVLHLDLKTRRPVLGND----FGGLY 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + K + PI+G+GGI+S + A +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAVRMVAQV-KQATSLPIIGVGGINSPEDAAEFILAGASAVQIGS-MSFYDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|432328157|ref|YP_007246301.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum sp.
MAR08-339]
gi|432134866|gb|AGB04135.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum sp.
MAR08-339]
Length = 299
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 12/179 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++ L KK ++ GADALELNLSCPH +G G+ G D E+V I ++ ++KIP +
Sbjct: 103 EDFVYLGKKMQEYGADALELNLSCPHA---KGYGMEVGTDLELVSEIVEELKKNLKIPVW 159
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
KLTPN +I IAKAA AD + INTV M++ D P + +GG+SG
Sbjct: 160 AKLTPNTESIVKIAKAAE--NADALVLINTVKA-MAIDVDAK-MPVLK----NIFGGLSG 211
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
A +P+G++AV +A PI+G+GGI + AL++I AGA AV+I +A+ + V
Sbjct: 212 PAIKPIGVRAVYEVAAEIEK-PIVGVGGITNGRDALEYIMAGASAVEIGTAIYLRGIEV 269
>gi|440749575|ref|ZP_20928821.1| Glutamate synthase [NADPH] small chain [Mariniradius
saccharolyticus AK6]
gi|436481861|gb|ELP38007.1| Glutamate synthase [NADPH] small chain [Mariniradius
saccharolyticus AK6]
Length = 602
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 26/307 (8%)
Query: 32 ERPVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTA 91
E+P S+IP +RLP + +N EV + DLG+ + T +++ + + GY A
Sbjct: 140 EQPAGGGMMRSQIPSFRLPEEVLNEEVNYILDLGIHTQ----FLTYVNSLKDVLEGGYDA 195
Query: 92 IFIGIGKPNANVIPIFQGLTEEMGF-YTSKTFLPRVATSSKKGLCGGCKKESLPILKGTV 150
+F+G G P +P G E F + +L VA K + V
Sbjct: 196 VFVGTGAPKGRDLPKLPGRKEGDKFIHIGIEWLANVAFDHIKSI------------SKKV 243
Query: 151 IVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ 210
IVLG G+TA DC ++ R G V VV R ++A P E + A E + + P+
Sbjct: 244 IVLGGGNTAMDCCRTSRRLGGKDVKVVVRSPFDEMKASPWEKEDALHEDIQIIDNHVPLS 303
Query: 211 VDVKDNKIAGMQFNRT----EQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LE 264
+V+D K+ GM+F + ++N K + + +E + ++A+ ++ A G +N +E
Sbjct: 304 FEVEDGKLIGMKFQKVRPVYDENGKRQLLPTDEPEVFIEADEVLIAIGQ---ENSFPWIE 360
Query: 265 AIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
+ D++G P VN T +++P VF GGD A + +V G AA IH + +
Sbjct: 361 RNIGLDFDQWGMPVVNEKTFQSTLPKVFFGGDAAFGPKNVITAVAQGHQAAVSIHLFCEG 420
Query: 325 KNNLTVP 331
K+ L P
Sbjct: 421 KDLLDRP 427
>gi|14521926|ref|NP_127403.1| oxidoreductase [Pyrococcus abyssi GE5]
gi|5459146|emb|CAB50632.1| gltB-2 glutamate synthase small chain [Pyrococcus abyssi GE5]
gi|380742566|tpe|CCE71200.1| TPA: putative oxidoreductase [Pyrococcus abyssi GE5]
Length = 475
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 165/291 (56%), Gaps = 24/291 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFI--GIGKPNA 101
IP++RLP + + E++ +K LGV+I+ + + R +TI +L ++ Y AIFI G G P
Sbjct: 197 IPEFRLPKEILRKELKKLKFLGVEIKTD-HIVGRTVTIPELLEE-YDAIFISTGAGTPKL 254
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
IP G+ G Y++ FL R+ + PI+ G VIV+GAG+TA
Sbjct: 255 LKIP---GINLN-GIYSANEFLTRINLMKAYKF----PEYDTPIVVGKRVIVIGAGNTAM 306
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIA 219
D A SALR GA +V++ +R+G ++ A EEVQ A EE +F+ F++PV+ + ++ ++
Sbjct: 307 DAARSALRLGA-EVIIAYRRGKEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVK 365
Query: 220 GMQFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
++F + E++++G+ + + I ++A+ +I A G T N +L P +K+ +
Sbjct: 366 AVKFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQT--PNKILWRTTPGLKVRE 423
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
G V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +
Sbjct: 424 DGTIIVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLSK 473
>gi|385816130|ref|YP_005852521.1| Dihydroorotate dehydrogenase B, catalytic unit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
gi|325126167|gb|ADY85497.1| Dihydroorotate dehydrogenase B, catalytic unit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 309
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E+++ A DALELNLSCP+ + E GM G PEMV I+ V+ V +P +
Sbjct: 110 EDYVEVAEILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMVEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT L+ L D P +G +GG+
Sbjct: 167 VKLTPNVTSIVEIAQAAEGGGADGLTLINT---LLVLHLDLKTRRPVLGND----FGGLY 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + K + PI+G+GGI+S + A +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAVRMVAQV-KQATSLPIIGVGGINSPEDAAEFILAGASAVQIGS-MAFYDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|427774707|ref|ZP_18967136.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|414064728|gb|EKT45605.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
Length = 289
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIM-GENEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAV 748
+Q+ + +
Sbjct: 278 TLQVTTGI 285
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
>gi|435853298|ref|YP_007314617.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
gi|433669709|gb|AGB40524.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
Length = 460
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 22/292 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V EVE +KDLGV+I+ + + + +++L +GY A+F+G G
Sbjct: 180 IPEFRLPKEIVQDEVEKIKDLGVEIKLNKVVG-KIKGVDELFAEGYDAVFVGTGAG---- 234
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F GL E G Y++ FL RV K P+ G V V+GAG+ A
Sbjct: 235 LPKFLGLEGENLNGVYSANEFLTRVNLMKAYKF----PKYKTPVYVGDKVAVVGAGNVAM 290
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNKIA 219
D A +ALR GA + ++V+R+G + A EE+ A EE EF +P ++ +D +
Sbjct: 291 DAARTALRLGAKESMIVYRRGREEMPAREEEIHHAQEEGVEFKLLNNPTRILGDQDGFVR 350
Query: 220 GMQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
GM+ + E E+ E + E ++ + +I A G N +L P +K
Sbjct: 351 GMECVKMELGERDESGRRRPIAIEGSEFEIDVDTVIMAIGQN--PNPILLQDTPEIKTTD 408
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+G + + + TS GVF GGD + T +E++ GK AA I +YIQ++
Sbjct: 409 WGTIKTD-ESKETSKEGVFAGGDVVTGAATVIEAMGAGKQAAQSIDQYIQKQ 459
>gi|339441582|ref|YP_004707587.1| dihydroorotate dehydrogenase [Clostridium sp. SY8519]
gi|338900983|dbj|BAK46485.1| dihydroorotate dehydrogenase [Clostridium sp. SY8519]
Length = 301
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 109/177 (61%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C + ++++LE+ ++ D LE+N+SCP+ R G+A GQDP+MV I+ V++
Sbjct: 99 VCGHTEEEYLEVVERLADQPVDLLEINISCPN---VREGGMAFGQDPKMVEAITGAVKAK 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
+ P +KL+PN+T+I ++A+AA G ADGVS INT++G M + D +
Sbjct: 156 ARQPVIMKLSPNVTDIAEMARAAEAGGADGVSLINTLTG-MKIDVDRRRFVLA-----NR 209
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A P+ ++ V A+ N PI+G+GG+ +A+ AL+ I AGA AV + +A
Sbjct: 210 TGGMSGPAVHPIAVRMVYETAQAV-NIPIIGMGGVQTAEDALELILAGATAVSVGTA 265
>gi|57641619|ref|YP_184097.1| putative oxidoreductase [Thermococcus kodakarensis KOD1]
gi|57159943|dbj|BAD85873.1| ferredoxin:NADP oxidoreductase, alpha subunit [Thermococcus
kodakarensis KOD1]
Length = 481
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 158/290 (54%), Gaps = 19/290 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ E+ +K LGV+I + + R +TIE+L ++ Y A+FIG G +
Sbjct: 200 IPEFRLPKEILDQELAKLKRLGVEIRTDHVVG-RTVTIEELLQE-YDAVFIGTGAGTPKL 257
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ + L + + Y++ FL RV + PI G IV+GAG+TA D
Sbjct: 258 LNVPGILLDRI--YSANEFLTRVNLMKAYEF----PEYDTPIAIGKKTIVIGAGNTAMDA 311
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR G+ +V + +R+G ++ A EE++ A EE +F F+ PV+ + ++ ++ +
Sbjct: 312 ARSALRLGS-EVTIAYRRGREDMTARIEEIKHAEEEGVKFEFFLQPVEFIGDENGRVKAV 370
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
+F + E++ +G+ + + + L+A+ +I A G L N ++ +K + G
Sbjct: 371 KFEKMRPLDERDARGKRKIVGTGEYVTLEADTVIIAIG--LEPNRIITETPGLKTNTNGT 428
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DGK AA IH+YIQ K
Sbjct: 429 LVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAKAIHEYIQAKR 477
>gi|16081529|ref|NP_393883.1| dihydroorotate dehydrogenase 1B [Thermoplasma acidophilum DSM 1728]
gi|13878694|sp|Q9HL35.1|PYRDB_THEAC RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|10639575|emb|CAC11547.1| DIHYDROOROTATE DEHYDROGENASE B related protein [Thermoplasma
acidophilum]
Length = 300
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S+ + + + ++ L +K ++ G DA+ELNLSCPH +G GL G DP++V +I
Sbjct: 95 VIGSVFAS-DAESFVNLGRKMQEYGCDAVELNLSCPH---VKGFGLEVGSDPDLVEDIVN 150
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++S + +P F KL+PN+++I +IAKAA KAD INTV ++ D V T
Sbjct: 151 EMKSKISVPVFAKLSPNVSDIIEIAKAAE--KADAYVLINTVK---AMKIDIRARMPVLT 205
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
YGG+SG A +P+G++ V + K I+G+GGI + + A+++I AGA AVQI
Sbjct: 206 ---NAYGGLSGPAIKPVGVRYVYEVKKETGK-DIIGVGGITTYEDAVEYIMAGASAVQIG 261
Query: 746 SAVQNQDFTVVDDYITGLQTLL 767
+A+ +V + I+ + T +
Sbjct: 262 TALYTVGKSVFRNIISQMNTFM 283
>gi|390949304|ref|YP_006413063.1| NADPH-dependent glutamate synthase [Thiocystis violascens DSM 198]
gi|390425873|gb|AFL72938.1| NADPH-dependent glutamate synthase, homotetrameric [Thiocystis
violascens DSM 198]
Length = 1005
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 29/296 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKD-GYTAIFIGIGKPNAN 102
IP +RLP + + EV+ ++D GV+I + + R T+ +L ++ GY A+F+GIG
Sbjct: 473 IPAFRLPREIIAREVQQLRDQGVEIAANKVIG-RTFTVPQLLQEMGYDAVFLGIGAGA-- 529
Query: 103 VIPIFQGLTEEMG--FYTSKTFLPRVATSSKKGLCGGCKKESL--PILKG-TVIVLGAGD 157
P F G+ E Y++ FL RV L GG + + PI G +V+V+GAG+
Sbjct: 530 --PTFLGIPGEHAATVYSANEFLTRV------NLMGGDRFPYVDTPIRVGQSVVVVGAGN 581
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV--DVKD 215
TA DC A R GA +V V+R+ A EE++ A EE EF PV+V D +
Sbjct: 582 TAMDCLRVAKRLGAQRVTCVYRRSEAEAPARVEELRHAREEGVEFFFLHGPVEVLTDTEG 641
Query: 216 NKIAGMQFNRT---EQNEKGEWVE-DEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271
N + GM+ + E + +G +R + + +ISA G T + V E+ + L
Sbjct: 642 N-VTGMKVEKMALGEPDARGRRRPLPTGERFDIVCDTVISALG-TRANTLVTESTPDLAL 699
Query: 272 DKYGYPEVN----YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
D GY + +T AT++PGVF GGD N T + ++ G+ AA I Y++
Sbjct: 700 DTRGYIAADDGKLASTQATNLPGVFAGGDIVNGGATVILAMGAGRRAARSIETYLR 755
>gi|374627816|ref|ZP_09700217.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
8_2_54BFAA]
gi|373912867|gb|EHQ44711.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
8_2_54BFAA]
Length = 462
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 150/298 (50%), Gaps = 28/298 (9%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S IP++RLP V EV+ V LGVK E + R ITI++L++ GY IFIG G
Sbjct: 180 SYGIPEFRLPKALVQKEVDSVAALGVKFETNVVVG-RSITIDELQEQGYQGIFIGSGAG- 237
Query: 101 ANVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPI---LKGTVIVLGA 155
+P FQ + E G Y + FL RV L G + + P + TV V+GA
Sbjct: 238 ---LPRFQNIPGENLNGVYAANEFLTRV------NLMKGYEFPNHPTPVKITDTVCVIGA 288
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKD 215
G+ + DCA +A R GA V +V+R+ I A EEV A EE F +PV++ +D
Sbjct: 289 GNVSMDCARTAKRLGAKNVYIVYRRSDKEIPARAEEVHHAKEEGIIFKLLTNPVEIHGED 348
Query: 216 NKIAGMQFNRTEQNEKGEWVEDEEQR--IKLKANYIISAFGSTLLD-----NDVLEAIKP 268
+ M+ + E GE E +R +K +N++I G+ ++ N ++ P
Sbjct: 349 GWVKSME---CVEMELGEPDESGRRRPVVKEGSNFVIET-GTVIVSIGQSPNPLIRQTTP 404
Query: 269 -VKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
++ K+G V+ +M TS GV+ GGD + T + ++ GKTAA + +Y+ K
Sbjct: 405 GLETQKWGGIIVDEASMKTSKEGVYAGGDVVTGAATVILAMGAGKTAAKAMDEYLANK 462
>gi|345860429|ref|ZP_08812745.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus sp.
OT]
gi|344326481|gb|EGW37943.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus sp.
OT]
Length = 504
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 9/207 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASI+ N+ +W L+++ +AG D +E N SCPH GE G+G GQ+P++V +
Sbjct: 206 ILIASIL-GQNEAEWTFLARQVTEAGVDIIECNFSCPHMTGE-GLGSDVGQNPDLVALYT 263
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
R +P K+TPN+ N+ A AA + A G++AINT+ +M++ D + P V
Sbjct: 264 DATRKGTHLPILAKMTPNLGNMEIPALAAMKNGATGIAAINTIKSIMNIHLDDFSSEPRV 323
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF---PILGIGGIDSADVALQFIQAGAH 740
K + GG SG +P+ L+ + + K P+ PI G+GGI++ A +FI G
Sbjct: 324 DGK--SCVGGYSGKTVKPIALRFIHDLKK-HPDLKETPISGMGGIETWRDAAEFIALGCA 380
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ ++V + ++DD GL + L
Sbjct: 381 NLQVTTSVMQYGYRIIDDLSAGLSSYL 407
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV++++G A+ + EL+ + +C+ CG+CY++C D G+QA+ T +
Sbjct: 414 SVQEMVGMALPNLVPADELNRHSISYPKFDRSLCLGCGRCYLSCLDGGHQALVMDKATGR 473
Query: 550 AHVTDE-CTGCTLC 562
+ + C GC LC
Sbjct: 474 PVLNPKMCVGCQLC 487
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
+D+ +E CG+ NPF L+S+ + MV RAF GW A KT + + VSPR
Sbjct: 107 IDLRIEFCGVPCENPFFLSSSVVASNYDMVARAFAMGWAGAAFKT--IGTFVPQEVSPRF 164
Query: 406 VKGTTSRHLYGPEQGSFL---NIELISEKT 432
+T R E SF+ NIE IS+ T
Sbjct: 165 ---STIRK----EGNSFIGFKNIEQISDHT 187
>gi|315038743|ref|YP_004032311.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL 1112]
gi|325957179|ref|YP_004292591.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus 30SC]
gi|385817946|ref|YP_005854336.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL1118]
gi|312276876|gb|ADQ59516.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL 1112]
gi|325333744|gb|ADZ07652.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus 30SC]
gi|327183884|gb|AEA32331.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL1118]
Length = 307
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 116/177 (65%), Gaps = 17/177 (9%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ +RG G++ G P++V ++ +++ V +
Sbjct: 107 SEDDYVEVAKKLSDSGLVNALEINVSCPNV--DRG-GMSFGVHPDVVEELTQKIKNVVNV 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT---T 690
P +VKLTPN+T++ IAKAA +G ADG+S INT L+ + D V T+K
Sbjct: 164 PIYVKLTPNVTDVVTIAKAAEKGGADGLSMINT---LLGMDID------VKTRKPVLGHN 214
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ L+ ++ + + N PI+G+GGI SA+ ++F+ AGA AV + +A
Sbjct: 215 MGGLSGEAVKPVALRMIAQVHQSV-NLPIIGMGGISSAEDVVKFMLAGASAVAVGTA 270
>gi|339479193|gb|ABE95661.1| Dihydroorotate dehydrogenase, catalytic subunit [Bifidobacterium
breve UCC2003]
Length = 323
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ E+ +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 115 FVISNVAGHCDDDYAEVVEKLADSDADMLEINVSCPN---VSAGGMSVGADPVALANLMD 171
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ +G P A
Sbjct: 172 RLRPLTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRNGEPIIA--- 228
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P+ PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 229 ---NVTGGVSGPAVLPIGLAAVYHTRTVLPDIPIIGLGGIDSGEKALEYLYAGANAVEVG 285
Query: 746 SA 747
+A
Sbjct: 286 AA 287
>gi|291456747|ref|ZP_06596137.1| dihydroorotate oxidase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|417943200|ref|ZP_12586455.1| Dihydroorotate oxidase [Bifidobacterium breve CECT 7263]
gi|291382024|gb|EFE89542.1| dihydroorotate oxidase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|376166011|gb|EHS84939.1| Dihydroorotate oxidase [Bifidobacterium breve CECT 7263]
Length = 328
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ E+ +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 120 FVISNVAGHCDDDYAEVVEKLADSDADMLEINVSCPN---VSAGGMSVGADPVALANLMD 176
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ +G P A
Sbjct: 177 RLRPLTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRNGEPIIA--- 233
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P+ PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 234 ---NVTGGVSGPAVLPIGLAAVYHTRTVLPDIPIIGLGGIDSGEKALEYLYAGANAVEVG 290
Query: 746 SA 747
+A
Sbjct: 291 AA 292
>gi|255659221|ref|ZP_05404630.1| glutamate synthase, homotetrameric [Mitsuokella multacida DSM
20544]
gi|260848673|gb|EEX68680.1| glutamate synthase, homotetrameric [Mitsuokella multacida DSM
20544]
Length = 467
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 23/296 (7%)
Query: 44 IPQYRLPFD-AVNFEVELVKDLGVKIECERSLSTRDITI-EKLRKDGYTAIFIGIGKPNA 101
IP++RLP D V E+E ++ LGVKIE + S++ R T+ E L+++G+ A+FIG G
Sbjct: 183 IPEFRLPKDTVVKKEIENIEKLGVKIEVD-SVAGRLYTVDELLQEEGFDAVFIGTGAG-- 239
Query: 102 NVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDT 158
+P FQG+ E G Y++ FL R + + PI G V V+G G+
Sbjct: 240 --LPRFQGIPGESLNGVYSANEFLTRCNLMKAYKF----PEYATPIQVGRHVAVVGGGNV 293
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK- 217
A D A +ALR GA KV +++R+ I A EEV+ A EE +F +PV+V +N
Sbjct: 294 AMDAARTALRLGAEKVSIIYRRSAAEIPARAEEVEHAKEEGIDFQLLTNPVEVLGDENGW 353
Query: 218 IAGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ G++ R E E + + E ++ + +I A G+ N ++ P +K
Sbjct: 354 VKGLRCIRMELGEPDASGRRRPIPIEGSEFDMEMDTVIIAIGTG--PNPIIAHTTPGLKT 411
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
K G E + T ATS GVF GGD + T + ++ G+ AA I Y++ K
Sbjct: 412 TKRGNIEADEETCATSKEGVFAGGDIVTGAATVILAMGAGRKAAAAIDTYLKSKKK 467
>gi|420237089|ref|ZP_14741560.1| dihydroorotate dehydrogenase 1B [Parascardovia denticolens IPLA
20019]
gi|391879360|gb|EIT87866.1| dihydroorotate dehydrogenase 1B [Parascardovia denticolens IPLA
20019]
Length = 356
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 10/205 (4%)
Query: 563 LSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRN 622
L + + + ++ DD+ ++++K + AD LE+N+SCP+ G+A G DP +
Sbjct: 141 LGATVVTNVAGHSNDDYCQVAEKLTHSPADMLEINVSCPN---VSAGGMAVGSDPAALEV 197
Query: 623 ISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA 682
+ +R P VKLTPNIT+IT +A+AA + AD +S INT G+ G P A
Sbjct: 198 LMKRLRPLADKPLIVKLTPNITDITTVARAAVDNGADALSLINTFVGMRIDIRTGRPIIA 257
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
GGVSG A PM L V + + P+ P++GIGGI +A+ AL+F+ AGA+AV
Sbjct: 258 ------NVTGGVSGPAIHPMALAMVYKVRQALPHIPLIGIGGIATAEDALEFLYAGANAV 311
Query: 743 QICSAVQNQDFTVVDDYITGLQTLL 767
++ SA D T GL +LL
Sbjct: 312 EVGSAAL-IDPTAPMKVALGLDSLL 335
>gi|116748269|ref|YP_844956.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Syntrophobacter fumaroxidans MPOB]
gi|116697333|gb|ABK16521.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Syntrophobacter fumaroxidans MPOB]
Length = 1126
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP YRLP D ++ E+ + LGVK E + L RD +++ LR DGY IF+GIG +
Sbjct: 424 IPDYRLPQDVLDKEIGYLLRLGVKAETGKKLG-RDFSLDDLRNDGYRVIFLGIGAHRSLK 482
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ + G G + FL V K SLP + ++++G G+ A D +
Sbjct: 483 LNV-PGEDSYQGVVDALEFLREVNLGEK----------SLPGRR--IVIVGGGNVAIDAS 529
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
ALR G +V +V+R+ + A EE+ A EE + +PV + + NK+ G +
Sbjct: 530 RVALRLGCEEVTIVYRRTREEMPAYAEEIDAALEEGVKINYLTAPVGIRGEANKVTGFEV 589
Query: 224 NRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
RTE E + +K + + +ISA G + L + G
Sbjct: 590 IRTELGEPDQSGRRRPVPVKGSEFVIPCDAVISAIGQEPEAETC--GAGDLNLSRRGTIV 647
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
V+ ++M TS+P VF GGD T +E+V G+ AA +H+Y+ E
Sbjct: 648 VDRSSMQTSIPDVFAGGDAVVGPATVIEAVAAGRRAAEAMHRYVTE 693
>gi|393201797|ref|YP_006463639.1| dihydroorotate dehydrogenase [Solibacillus silvestris StLB046]
gi|327441128|dbj|BAK17493.1| dihydroorotate dehydrogenase [Solibacillus silvestris StLB046]
Length = 303
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 14/193 (7%)
Query: 578 DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D++E++ + KA ALELN+SCP+ + G+ G DPE R ++ V++ +P +
Sbjct: 107 DYVEVADRISKASNVKALELNISCPN---VKCGGIQFGTDPETARQLTAAVKAVSSVPVY 163
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKL+PN+TNI DIAKA G ADG++ INT+ G+ G P A GT GG+SG
Sbjct: 164 VKLSPNVTNIVDIAKAVEAGGADGITMINTLVGMRLDERTGKPVIANGT------GGLSG 217
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF--- 753
A +P+ ++ V + K N PI+G+GG+ A + F+ AGA AV + +A F
Sbjct: 218 PAIKPVAIRMVYDVYKAV-NIPIIGMGGVTCAQDVIDFMSAGASAVAVGTANFVDHFVCP 276
Query: 754 TVVDDYITGLQTL 766
T++++ L TL
Sbjct: 277 TIIEELPVLLDTL 289
>gi|167755994|ref|ZP_02428121.1| hypothetical protein CLORAM_01514 [Clostridium ramosum DSM 1402]
gi|365832746|ref|ZP_09374273.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
3_3_56FAA]
gi|167703986|gb|EDS18565.1| glutamate synthase (NADPH), homotetrameric [Clostridium ramosum DSM
1402]
gi|365259876|gb|EHM89851.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
3_3_56FAA]
Length = 462
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 150/298 (50%), Gaps = 28/298 (9%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S IP++RLP V EV+ V LGVK E + R ITI++L++ GY IFIG G
Sbjct: 180 SYGIPEFRLPKALVQKEVDSVAALGVKFETNVVVG-RSITIDELQEQGYQGIFIGSGAG- 237
Query: 101 ANVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPI---LKGTVIVLGA 155
+P FQ + E G Y + FL RV L G + + P + TV V+GA
Sbjct: 238 ---LPRFQNIPGENLNGVYAANEFLTRV------NLMKGYEFPNHPTPVKITDTVCVIGA 288
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKD 215
G+ + DCA +A R GA V +V+R+ I A EEV A EE F +PV++ +D
Sbjct: 289 GNVSMDCARTAKRLGAKNVYIVYRRSDKEIPARAEEVHHAKEEGIIFKLLTNPVEIHGED 348
Query: 216 NKIAGMQFNRTEQNEKGEWVEDEEQR--IKLKANYIISAFGSTLLD-----NDVLEAIKP 268
+ M+ + E GE E +R +K +N++I G+ ++ N ++ P
Sbjct: 349 GWVKSME---CVEMELGEPDESGRRRPVVKEGSNFVIET-GTVIVSIGQSPNPLIRQTTP 404
Query: 269 -VKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
++ K+G V+ +M TS GV+ GGD + T + ++ GKTAA + +Y+ K
Sbjct: 405 GLETQKWGGIIVDEDSMKTSKEGVYAGGDVVTGAATVILAMGAGKTAAKAMDEYLANK 462
>gi|148543364|ref|YP_001270734.1| dihydroorotate dehydrogenase 1B [Lactobacillus reuteri DSM 20016]
gi|184152774|ref|YP_001841115.1| dihydroorotate dehydrogenase 1B [Lactobacillus reuteri JCM 1112]
gi|227364438|ref|ZP_03848528.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus reuteri
MM2-3]
gi|325683637|ref|ZP_08163153.1| dihydroorotate oxidase [Lactobacillus reuteri MM4-1A]
gi|189038428|sp|A5VHS3.1|PYRDA_LACRD RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|229470318|sp|B2G5A3.1|PYRDA_LACRJ RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|148530398|gb|ABQ82397.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus reuteri
DSM 20016]
gi|183224118|dbj|BAG24635.1| dihydroorotate dehydrogenase [Lactobacillus reuteri JCM 1112]
gi|227070531|gb|EEI08864.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus reuteri
MM2-3]
gi|324977987|gb|EGC14938.1| dihydroorotate oxidase [Lactobacillus reuteri MM4-1A]
Length = 308
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 115/179 (64%), Gaps = 18/179 (10%)
Query: 574 YNKDDWLEL-SKKTEKAGADALELNLSCP---HGMGERGMGLACGQDPEMV-RNISLWVR 628
+++D+++++ S+ AG A+ELN+SCP HG G+A G DPE++ R + V+
Sbjct: 108 FSEDEYVKVVSEFANTAGVKAIELNVSCPNVKHG------GMAMGTDPEVLQRLVKQVVK 161
Query: 629 SSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKL 688
+++ IP +VKLTPN+TNI +A+AA +G A+G++ INT++GL P A
Sbjct: 162 AALGIPIYVKLTPNVTNIVPLAQAAEQGGANGLTMINTLTGLSIDLKTRRPALA------ 215
Query: 689 TTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ L+ + + + + PI+G+GGI+SA+ L+F+ AGA+AVQI +A
Sbjct: 216 NVTGGLSGPAIKPLALRMIHQV-RQVSSLPIIGVGGIESAEDVLEFMMAGANAVQIGAA 273
>gi|365174999|ref|ZP_09362437.1| glutamate synthase (NADPH), homotetrameric [Synergistes sp.
3_1_syn1]
gi|363613864|gb|EHL65369.1| glutamate synthase (NADPH), homotetrameric [Synergistes sp.
3_1_syn1]
Length = 470
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 148/295 (50%), Gaps = 26/295 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E+E ++ LGV IEC + + IT++++ ++ Y A +I +G
Sbjct: 187 IPEFRLPKKIVKMEIEAMQKLGVDIECNVVVG-KTITMQEIMEE-YDACYIAVGAGA--- 241
Query: 104 IPIFQGL--TEEMGFYTSKTFLPRVATSSKKGLCGGCK--KESLPILKGT-VIVLGAGDT 158
P FQG+ T G Y++ +L R+ L G + K P K V+V+G G+
Sbjct: 242 -PHFQGVPGTTLNGVYSASEYLTRI------NLMHGYEFPKFDTPAKKAKKVVVIGGGNV 294
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNK 217
A D A SA R GA +V V +R+ + A EE A EE F +P + VD +
Sbjct: 295 AMDAARSAKRLGAEEVTVAYRRSLAELPARIEEYHHAVEEGIIFNWLTNPTEYVDDGSGQ 354
Query: 218 IAG-----MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ G M+ + + + V E ++A+ I A G N VL + P +KL
Sbjct: 355 LKGVKCIKMELGEPDASGRRRPVPVEGSEFFIEADCAIEAIGQG--SNKVLLSTFPEMKL 412
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
+K+GY E + T ATSVPGVF GGD + T + ++ GK AA I KYI EK
Sbjct: 413 NKWGYIEADEKTGATSVPGVFAGGDIVTGAATVILAMGAGKDAAVAIDKYITEKK 467
>gi|194467523|ref|ZP_03073510.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
100-23]
gi|423335737|ref|ZP_17313509.1| dihydroorotate dehydrogenase [Lactobacillus reuteri ATCC 53608]
gi|194454559|gb|EDX43456.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
100-23]
gi|337728961|emb|CCC04081.1| dihydroorotate dehydrogenase [Lactobacillus reuteri ATCC 53608]
Length = 308
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 115/179 (64%), Gaps = 18/179 (10%)
Query: 574 YNKDDWLEL-SKKTEKAGADALELNLSCP---HGMGERGMGLACGQDPEMV-RNISLWVR 628
+++D+++++ S+ AG A+ELN+SCP HG G+A G DPE++ R + V+
Sbjct: 108 FSEDEYVKVVSEFANTAGVKAIELNVSCPNVKHG------GMAMGTDPEVLQRLVKQVVK 161
Query: 629 SSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKL 688
+++ IP +VKLTPN+TNI +A+AA +G A+G++ INT++GL P A
Sbjct: 162 AALGIPIYVKLTPNVTNIVPLAQAAEQGGANGLTMINTLTGLSIDLKTRRPALA------ 215
Query: 689 TTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ L+ + + + + PI+G+GGI+SA+ L+F+ AGA+AVQI +A
Sbjct: 216 NVTGGLSGPAIKPLALRMIHQV-RQVSSLPIIGVGGIESAEDVLEFMMAGANAVQIGAA 273
>gi|212224527|ref|YP_002307763.1| putative oxidoreductase [Thermococcus onnurineus NA1]
gi|212009484|gb|ACJ16866.1| ferredoxin:NADP oxidoreductase, alpha subunit [Thermococcus
onnurineus NA1]
Length = 482
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 162/289 (56%), Gaps = 18/289 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E+ +++LGV+I+ + + + +T+E+L ++ Y A+FIG G +
Sbjct: 201 IPEFRLPKEILEKEIAKLRELGVEIKLD-YIVGKTVTLEELLEE-YDAVFIGTGAGTPKL 258
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ I L + + YT+ FL R+ + K E + I K T IV+GAG+TA D A
Sbjct: 259 LNIPGILLDRI--YTANEFLTRI--NLMKAYLFPEYDEPIAIGKKT-IVIGAGNTAMDAA 313
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGMQ 222
SALR G +V + +R+G ++ A EE+Q A EE +F F++PV+ + ++ K+ ++
Sbjct: 314 RSALRLG-TEVTIAYRRGREDMTARIEEIQHAEEEGVKFEFFVNPVEFIGDENGKVKAVK 372
Query: 223 FNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLDKYGY 276
F + E++ +G+ + + I L+A+ +I A G L N ++ E +K + G
Sbjct: 373 FEKMRPLDERDSRGKRKIVGTGEYITLEADTVIIAIG--LEPNRIISEEATGLKTNSDGT 430
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
V+ M TS+PGVF GGD T + ++ DGK AA IH YIQ K
Sbjct: 431 LVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAKAIHNYIQAK 478
>gi|237748005|ref|ZP_04578485.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes OXCC13]
gi|229379367|gb|EEO29458.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes OXCC13]
Length = 415
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 28/246 (11%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIM + N D+W L++K GAD +E N SCP M MG GQ PE+V +
Sbjct: 102 VMIASIMGS-NDDEWRTLAQKVTDIGADIIECNFSCPQ-MTSSTMGSDVGQSPELVAQYT 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V + ++P K+TPNI ++ A AA A G++AINTV + +L + +P P V
Sbjct: 160 EAVCRATRLPVLAKMTPNIGHMEIPAIAAIHAGAKGIAAINTVKAITNLDLECLSPMPVV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
K ++ G SG A +P+ L+ ++ + + + P+ GIGGI + L+F+ G+
Sbjct: 220 NGK--SSISGYSGPAIKPIALRFIAQMKQHPQLKDIPVSGIGGIVTWQDVLEFLLVGSST 277
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQSPPTPVHQKGKPAYQFRDKEG 801
+Q+ +AV + +V+D +GL + K + + D G
Sbjct: 278 IQVTTAVMEYGYRIVEDMASGLSHFMEEKGIE---------------------KLSDLVG 316
Query: 802 KAIPNF 807
KA+PN
Sbjct: 317 KALPNI 322
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I + D++G+A+ + +LD V+ I+ CI CG+CY++C D G+QAI + T
Sbjct: 308 IEKLSDLVGKALPNIVAADDLDRDFMVIPGIDQTKCIGCGRCYVSCFDGGHQAIDWDEYT 367
Query: 548 HQAHVTDECTGCTLCLSI 565
+ + C GC LCL++
Sbjct: 368 RTPTINNRCVGCHLCLNV 385
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S++ G+ NPF L+S+P + MV +AFE+GWG KT + + SPR
Sbjct: 4 DLSIDFLGVHCENPFFLSSSPVDSDYEMVAKAFESGWGGVAYKTVGIF--LPDECSPRF- 60
Query: 407 KGTTSRHLYGPEQGSFLNIELISEK 431
+ H G G F N+E+IS+K
Sbjct: 61 --DITGHPGGAWAG-FKNMEMISDK 82
>gi|339441394|ref|YP_004707399.1| hypothetical protein CXIVA_03300 [Clostridium sp. SY8519]
gi|338900795|dbj|BAK46297.1| hypothetical protein CXIVA_03300 [Clostridium sp. SY8519]
Length = 504
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 9/211 (4%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+ +ASIM + ++ +W EL+ + E AGAD +E N SCP +GE+ +G G DP +V +
Sbjct: 204 VFLASIMGS-SEAEWTELAARVEDAGADLIECNFSCPQMVGEQ-LGSDVGTDPRLVYTFT 261
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
VR +P K+TPNIT++T AKAA G ADG++AINT+ +M++ D P V
Sbjct: 262 QAVRRGTSLPILAKMTPNITDMTVAAKAAVGGGADGIAAINTIKSVMNVDLDSFASEPDV 321
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHA 741
G + + GG SG A +P+ L+ ++ +AK + PI G+GGI++ A +F+ G
Sbjct: 322 GGR--SCVGGYSGKAVKPIALRFITDLAKDPELCSVPISGMGGIETWRDAAEFLACGCDT 379
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLLYLKST 772
VQI +AV + +++D + G+ + YL+ T
Sbjct: 380 VQITTAVMQYGYRIIEDLLDGM--IRYLQRT 408
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I SV+D++G+A+ V LD K N C+ CG+C ++C D G+QAI E
Sbjct: 410 ISSVRDLVGKALDEVVPTDALDRKTVSYPKFNRQACVGCGRCSISCFDGGHQAIVM--EE 467
Query: 548 HQAHVTDECTGCTLC 562
++C GC LC
Sbjct: 468 KPRLNPEKCVGCQLC 482
>gi|430741715|ref|YP_007200844.1| dihydroorotate dehydrogenase family protein [Singulisphaera
acidiphila DSM 18658]
gi|430013435|gb|AGA25149.1| dihydroorotate dehydrogenase family protein [Singulisphaera
acidiphila DSM 18658]
Length = 318
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 569 SIMCTYNKDDWLELSKKTEKAGAD----ALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+++ +D + E G D LELN+SCP+ GL G DP+ V +
Sbjct: 95 AVIANIAGEDEDQFVAMAETLGGDPGLAGLELNVSCPN----VSHGLDLGIDPDAVGRLV 150
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
VR+ +P KLTPN+T+I IA+AA EG AD VS INT GL+ P A
Sbjct: 151 RRVRAVTPLPIIAKLTPNVTDIVAIARAAAEGGADAVSLINTFRGLVVNWRKRRPVLA-- 208
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG A +P+ L+ V +A+ P+ PI+GIGGI S D AL+F+ AGA A+Q+
Sbjct: 209 ----NDVGGLSGPAIKPLALRMVWDVARALPDLPIIGIGGIASVDDALEFLVAGASAIQV 264
Query: 745 CSAVQNQDFTVVDDYITGLQTLL 767
+A D T D + L +L
Sbjct: 265 GTATF-YDPTASDRLVGDLSRIL 286
>gi|327401692|ref|YP_004342531.1| dihydroorotate dehydrogenase [Archaeoglobus veneficus SNP6]
gi|327317200|gb|AEA47816.1| dihydroorotate dehydrogenase family protein [Archaeoglobus
veneficus SNP6]
Length = 313
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 93/158 (58%), Gaps = 10/158 (6%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIA 650
ADA ELNLSCPH +G+A G DPE+V+ I V+ S + P F KL+PN+ ++ +I
Sbjct: 131 ADAFELNLSCPHA---ENVGMAVGSDPELVKEIVAEVKRSTEKPVFAKLSPNVLDVVEIG 187
Query: 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSI 710
KAA EG D V A+NTV G+ P K GGVSG A +P+ LK V +
Sbjct: 188 KAAEEGGVDAVVAVNTVKGMSIDIVSRKP------KLSNISGGVSGEAIKPIALKCVWDL 241
Query: 711 AKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
K + P++G+GGI + ++FI AGA AVQI SA+
Sbjct: 242 YKEL-DVPVIGVGGITTWKDVVEFILAGATAVQIGSAL 278
>gi|227890081|ref|ZP_04007886.1| dihydroorotate dehydrogenase 1B [Lactobacillus johnsonii ATCC
33200]
gi|227849525|gb|EEJ59611.1| dihydroorotate dehydrogenase 1B [Lactobacillus johnsonii ATCC
33200]
Length = 307
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 570 IMCTYNKDD---WLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + +D +LE++KK +G +ALE+N+SCP+ + + GM + G P++V ++
Sbjct: 99 IMASVGGEDEAGYLEVAKKLSDSGLVNALEINVSCPN-VNQGGM--SFGVHPDVVEELTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++S VKIP +VKLTPN+T+IT IAKAA G ADG+S INT+ G M + + P +G
Sbjct: 156 KIKSVVKIPIYVKLTPNVTDITQIAKAAENGGADGLSLINTLLG-MEIDVETR-KPVLGH 213
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ V + + PI+G+GGI SA ++FI AGA+AV +
Sbjct: 214 N----IGGLSGEAVKPIAIRMVHQV-RESTTLPIIGMGGISSAKDVIEFILAGANAVAVG 268
Query: 746 SA 747
+A
Sbjct: 269 TA 270
>gi|406660998|ref|ZP_11069124.1| Glutamate synthase [NADPH] small chain [Cecembia lonarensis LW9]
gi|405555230|gb|EKB50275.1| Glutamate synthase [NADPH] small chain [Cecembia lonarensis LW9]
Length = 601
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 26/292 (8%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
S+IP +RLP + +N EV + D+G+ + T ++ ++ Y A+F+G G P
Sbjct: 149 SQIPSFRLPEEVLNEEVNYILDMGIHTQ----FLTYVKSLREVLSQKYDAVFVGTGAPRG 204
Query: 102 NVIPIFQGLTEEMGF-YTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+P G E F + +L VA K + V+VLG G+TA
Sbjct: 205 RDLPKLPGRKEGDKFIHIGIEWLANVAFEHTKSI------------GEKVLVLGGGNTAM 252
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DC ++ R G V VV R ++A P E + A E E L P+ +VKD K+ G
Sbjct: 253 DCCRTSRRLGGKDVKVVVRSPFEEMKASPWEKEDALHEDIEILDNHVPLSFEVKDEKLIG 312
Query: 221 MQFNRT----EQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKY 274
M+F + + N K + + +E + L+A+ ++ A G +N +E ++ D++
Sbjct: 313 MKFQKVKAVYDDNGKRQLLPTDEPEVFLEADEVLIAIGQ---ENSFPWIERDLGLEFDQW 369
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
G P V+ T +++P VF GGD A + +V G AA IH + + KN
Sbjct: 370 GMPVVDAVTYQSTLPAVFFGGDAAFGPKNVITAVAQGHQAAVSIHLFCEGKN 421
>gi|332158104|ref|YP_004423383.1| putative oxidoreductase [Pyrococcus sp. NA2]
gi|331033567|gb|AEC51379.1| putative oxidoreductase [Pyrococcus sp. NA2]
Length = 476
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 166/292 (56%), Gaps = 20/292 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E++ +K LGV+I+ + + R ITI +L K+ + A+FIG G +
Sbjct: 197 IPEFRLPKEILKKELKKLKLLGVEIKTDHVVG-RTITIPELLKE-FDAVFIGTGAGTPKL 254
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ I G+ G Y++ FL RV + PI+ G VIV+GAG+TA D
Sbjct: 255 LNI-PGINLN-GIYSANEFLTRVNLMKAYKF----PEYDTPIIVGKKVIVIGAGNTAMDA 308
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V + +R+G ++ A EEV+ A EE +FL F++PV+ + K+ + +
Sbjct: 309 ARSALRLGA-EVTIAYRRGREDMTARIEEVKHAEEEGVKFLFFVNPVEFIGDKEGNVRAV 367
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKYG 275
+F + E++++G+ + + I ++A+ +I A G T N +L P +K+ + G
Sbjct: 368 KFEKMKPLEERDKRGKRKIVGTGEYITVEADTVIIAIGQT--PNKILWKTTPGLKVRENG 425
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +KNN
Sbjct: 426 TIIVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLTKKNN 476
>gi|104774368|ref|YP_619348.1| dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423449|emb|CAI98330.1| Dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 309
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D++E+++ A DALELNLSCP+ + E GM G PEM+ I+ V+ V +P +
Sbjct: 110 EDYVEVAEILAAAKPDALELNLSCPN-VSEGGM--TFGIVPEMLEKITRLVKEKVDLPVY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVGTKKLTTYGGVS 695
VKLTPN+T+I +IA+AA G ADG++ INT L+ L D P +G +GG+
Sbjct: 167 VKLTPNVTSIVEIAQAAEGGGADGLTLINT---LLVLHLDLKTRRPVLGND----FGGLY 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V+ + K + PI+G+GGI+S + A +FI AGA AVQI S + D
Sbjct: 220 GQAVKPVAVRMVAQV-KQATSLPIIGVGGINSPEDAAEFILAGASAVQIGS-MSFYDKLA 277
Query: 756 VDDYITGLQTLL 767
+ I GL +L
Sbjct: 278 IKHVIDGLPAVL 289
>gi|14591298|ref|NP_143376.1| dihydroorotate dehydrogenase 1B [Pyrococcus horikoshii OT3]
gi|9297037|sp|O59185.1|PYRDB_PYRHO RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|3257941|dbj|BAA30624.1| 303aa long hypothetical dihydroorotate dehydrogenase [Pyrococcus
horikoshii OT3]
Length = 303
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 114/194 (58%), Gaps = 13/194 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+++ L++K E ADA ELNLSCPH +G G+ GQDP+ V + V+ P
Sbjct: 106 EEFAFLAEKLEPV-ADAFELNLSCPHA---KGYGMEIGQDPKNVYEVVKAVKDVTDKPVI 161
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
KLTPN+ +IT + AA G ADGVSAINTV +++ D + + K+ GG SG
Sbjct: 162 AKLTPNVNDITKLGLAAERGGADGVSAINTVK---AIAIDIYAKRPILSNKV---GGYSG 215
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVV 756
+P+ L+AV +AK+ + P++GIGGI S A++F+ AGA A+QI +AV + F V
Sbjct: 216 PGIKPIALRAVYDLAKVL-DIPVIGIGGITSWRDAVEFLLAGASALQIGTAVYLRGFKVF 274
Query: 757 DDYITGLQTLLYLK 770
+ G+ + YLK
Sbjct: 275 KEISNGI--IEYLK 286
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V++ G++F NP LAS ++RRA G G VTK+ + + +P IV+
Sbjct: 6 LEVKLFGIRFENPLILASGVVDMTPELLRRAHNEGAGGVVTKSIGKEPRKGYD-NPTIVE 64
Query: 408 ----GTTSRHLYGPEQGSFLNIELISEKTAF-IFFFLFQAIPNFGEYKKIRENL-----I 457
+ L P +FLN E I E+ F + +F P E+ + E L
Sbjct: 65 LPYGLINAMGLPNPGWEAFLN-EFIDERFDFPVIVSIFGGTPE--EFAFLAEKLEPVADA 121
Query: 458 TELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKD--VIGQAVQRVTNYTEL 508
ELNL ++ G ++ G + + V+ + V D VI + V + T+L
Sbjct: 122 FELNLSCPHAKGYGMEIGQDPKNVYEVVKAVKDVTDKPVIAKLTPNVNDITKL 174
>gi|385825833|ref|YP_005862175.1| dihydroorotate dehydrogenase [Lactobacillus johnsonii DPC 6026]
gi|417837483|ref|ZP_12483721.1| dihydroorotate dehydrogenase, catalytic subunit [Lactobacillus
johnsonii pf01]
gi|329667277|gb|AEB93225.1| dihydroorotate dehydrogenase [Lactobacillus johnsonii DPC 6026]
gi|338761026|gb|EGP12295.1| dihydroorotate dehydrogenase, catalytic subunit [Lactobacillus
johnsonii pf01]
Length = 307
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 570 IMCTYNKDD---WLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + +D +LE++KK +G +ALE+N+SCP+ + + GM + G P++V ++
Sbjct: 99 IMASVGGEDEAGYLEVAKKLSDSGLVNALEINVSCPN-VNQGGM--SFGVHPDVVEELTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++S VKIP +VKLTPN+T+IT IAKAA G ADG+S INT+ G M + + P +G
Sbjct: 156 KIKSVVKIPIYVKLTPNVTDITQIAKAAENGGADGLSLINTLLG-MEIDVETR-KPVLGH 213
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ V + + PI+G+GGI SA ++FI AGA+AV +
Sbjct: 214 N----IGGLSGEAVKPIAIRMVHQV-RESTTLPIIGMGGISSAKDVIEFILAGANAVAVG 268
Query: 746 SA 747
+A
Sbjct: 269 TA 270
>gi|42519206|ref|NP_965136.1| dihydroorotate dehydrogenase 1B [Lactobacillus johnsonii NCC 533]
gi|81832219|sp|Q74J29.1|PYRDA_LACJO RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|41583494|gb|AAS09102.1| dihydroorotate dehydrogenase [Lactobacillus johnsonii NCC 533]
Length = 307
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 570 IMCTYNKDD---WLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + +D +LE++KK +G +ALE+N+SCP+ + + GM + G P++V ++
Sbjct: 99 IMASVGGEDEAGYLEVAKKLSDSGLVNALEINVSCPN-VNQGGM--SFGVHPDVVEELTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++S VKIP +VKLTPN+T+IT IAKAA G ADG+S INT+ G M + + P +G
Sbjct: 156 KIKSLVKIPIYVKLTPNVTDITQIAKAAENGGADGLSLINTLLG-MEIDVETR-KPVLGH 213
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ V + + PI+G+GGI SA ++FI AGA+AV +
Sbjct: 214 N----IGGLSGEAVKPIAIRMVHQV-RESTTLPIIGMGGISSAKDVIEFILAGANAVAVG 268
Query: 746 SA 747
+A
Sbjct: 269 TA 270
>gi|294496112|ref|YP_003542605.1| dihydroorotate oxidase B, catalytic subunit [Methanohalophilus
mahii DSM 5219]
gi|292667111|gb|ADE36960.1| dihydroorotate oxidase B, catalytic subunit [Methanohalophilus
mahii DSM 5219]
Length = 299
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 14/214 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LIASI + ++ E++ + D ELN+SCPH G G + G DP++V I+
Sbjct: 91 LIASIFGG-DAAEFTEVANGLLSSKPDCFELNVSCPHA---EGYGASVGTDPDLVHEITA 146
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V +V +P +VKLTPN+T+IT I +AA A V AINTV G+ G +P +G
Sbjct: 147 SVVDAVDVPVWVKLTPNVTDITSIGRAAESAGASAVVAINTVRGMAIDIHSG--YPILGN 204
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ +GG+SG A +P+ +K V + + + P++G+GGI A++ I AGA AV+I
Sbjct: 205 R----FGGLSGPAVKPVAVKCVYDLYEAL-DIPVIGVGGITCPQDAIEMILAGASAVEIG 259
Query: 746 SAVQN--QDFTVVDDYI-TGLQTLLYLKSTQLKG 776
SAV + Q F + I T LQ Y K+ + G
Sbjct: 260 SAVHDDTQIFETISKGIDTYLQKYGYSKTEDITG 293
>gi|220931491|ref|YP_002508399.1| glutamate synthase (NADPH) small subunit [Halothermothrix orenii H
168]
gi|219992801|gb|ACL69404.1| glutamate synthase (NADPH) small subunit [Halothermothrix orenii H
168]
Length = 476
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 21/292 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP ++ EVE +K LGV+ + + + ITI++L +DGY A+FIG G
Sbjct: 194 IPEFRLPKSILDQEVENIKKLGVEFKLN-VIIGKTITIDELFEDGYKAVFIGTGAG---- 248
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAF 160
+P+F + E G Y++ FL RV + P+ G V V+G G+ A
Sbjct: 249 LPLFLNIPGENLNGVYSANEFLTRVNLMKAYKF----PEFKTPVKVGRRVAVIGGGNVAM 304
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
D A +A R GA KV+VV+R+ + A EE++ A EE EF+ SPV++ ++ +
Sbjct: 305 DAARTAKRLGAEKVMVVYRRSEEEMPARNEEIEHAREEGIEFILLSSPVKIHGENGLVTA 364
Query: 221 MQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGSTLLDNDVLEA-IKPVKLDKY 274
++ + E EK + + E +K + +I A G T N +L + + ++ + +
Sbjct: 365 LECIKMELGEKDKSGRRRPIPVEGSNWNMKLDTVIVAIGQT--PNPLLTSNSRGIETESW 422
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
G +V+ ++TS GVF GGD + T +E++ GK AA I +Y++ N
Sbjct: 423 GGIKVD-ENLSTSRQGVFAGGDVVTGAATVIEAMGAGKKAARSILEYLRSDN 473
>gi|375086843|ref|ZP_09733238.1| glutamate synthase (NADPH), homotetrameric [Megamonas funiformis
YIT 11815]
gi|374563783|gb|EHR35088.1| glutamate synthase (NADPH), homotetrameric [Megamonas funiformis
YIT 11815]
Length = 453
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 144/284 (50%), Gaps = 11/284 (3%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ +K LGV + + T +IT+++L G+ AIFIG G +
Sbjct: 167 IPEFRLPKQVVRREVKRIKKLGVDFKLNIMVGT-EITVDELFNQGFDAIFIGTGNALSKS 225
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
+PI + G + FL V S+ + +PI +G V+V+G G+TA D
Sbjct: 226 LPIDGAKLK--GVIQATYFLQMVELSNSNSV----DPNEVPIKEGDEVVVIGGGNTAMDA 279
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
A +A+RCGA V VV R+ ++ A+ E+ A EE E PV++ + ++ + G++
Sbjct: 280 ARTAMRCGAKSVKVVNRRREEDMAALKSEIDAAKEEGVEIHALRGPVEI-IGEDAVTGIK 338
Query: 223 FNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYT 282
+ E +E + V D + R AN II A G ++++ + +D+ G+ +
Sbjct: 339 CSVREFDEALDKVVDTDGREYFSANKIIIAIGQKPASR-IVDSTSGIDVDENGFVKTREK 397
Query: 283 TMATSV-PGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
++ GVF GGD N T V ++ D + A I +Y++ K
Sbjct: 398 PYGMTMRHGVFSGGDVVNGPATVVVAMKDAQKVAQGIAQYVEAK 441
>gi|51244484|ref|YP_064368.1| bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase
subunit beta [Desulfotalea psychrophila LSv54]
gi|50875521|emb|CAG35361.1| probable glutamate synthase, beta subunit [Desulfotalea
psychrophila LSv54]
Length = 741
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 155/297 (52%), Gaps = 36/297 (12%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECE----RSLSTRDITIEKLRKDGYTAIFIGIGKP 99
IP++RLP + V+ EVE + LGVK E ++L+ ++I E + + FI
Sbjct: 465 IPEFRLPKNIVDHEVENLVALGVKFEFNVIIGQTLTIKEIMAE------FDSCFIA---- 514
Query: 100 NANVIPIFQGLTEEM--GFYTSKTFLPRV--ATSSKKGLCGGCKKESLPILKG-TVIVLG 154
N +PIF L E G Y+S +L RV + KKG + PI+ G T +V G
Sbjct: 515 NGAGLPIFLNLPGENLNGVYSSNEYLTRVNLMNAYKKG-------SATPIVTGPTTVVFG 567
Query: 155 AGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD-- 212
G+TA D A +A R G+ +V++ +R+G + A EEV A +E EF+ ++P+ +
Sbjct: 568 GGNTAMDSARTAKRMGSERVILAYRRGRDEMPARLEEVIHAEQEGIEFMFLVAPLSIGGT 627
Query: 213 ----VKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP 268
V++ + M+ + + + V E K++A+ +I + G+T N +L + P
Sbjct: 628 EDGWVENVHLQKMELGEPDASGRRRPVAIEGSEFKVEADIVIMSIGTT--SNPLLTSTCP 685
Query: 269 -VKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
++L+K+G V+ M +S+ GVF GGD T + ++ DGK AA IH Y+Q+
Sbjct: 686 ELELNKWGNIVVDEKQM-SSMQGVFAGGDIVRGGATVILAMGDGKNAAQSIHDYLQK 741
>gi|389851457|ref|YP_006353691.1| oxidoreductase [Pyrococcus sp. ST04]
gi|388248763|gb|AFK21616.1| putative oxidoreductase [Pyrococcus sp. ST04]
Length = 476
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 164/292 (56%), Gaps = 20/292 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E++ ++ LGV+I+ + + R +TI +L ++ Y A+FIG G +
Sbjct: 197 IPEFRLPKEILRKELKKLQILGVEIKTDHIVG-RTVTIPELLQE-YDAVFIGTGAGTPKL 254
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ I G+ G Y++ FL R+ + PI+ G V+V+GAG+TA D
Sbjct: 255 LNI-PGINLN-GIYSANEFLTRINLMKAYKF----PEYDTPIIVGKKVVVIGAGNTAMDA 308
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V + +R+G ++ A EEVQ A EE +F+ F++PV+ + ++ ++ +
Sbjct: 309 ARSALRLGA-EVTIAYRRGEEDMTARIEEVQHAKEEGVKFMFFVNPVEFIGDEEGRVKAV 367
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKYG 275
+F + E++ +G+ + + I ++A+ +I A G + N +L P +K+ + G
Sbjct: 368 KFEKMKPLEERDARGKRKIVGTGEYITVEADTVIIAIGQ--VPNKILWKTTPGLKVTEKG 425
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ K+
Sbjct: 426 TIVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLTRKST 476
>gi|223476926|ref|YP_002581312.1| glutamate synthase (NADPH), homotetrameric [Thermococcus sp. AM4]
gi|214032152|gb|EEB72983.1| glutamate synthase (NADPH), homotetrameric [Thermococcus sp. AM4]
Length = 471
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 157/290 (54%), Gaps = 19/290 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ E+ +K LGV+I+ + + R +T+E+L + Y A+FIG G +
Sbjct: 191 IPEFRLPKEILDHELAKLKRLGVEIKTDHVVG-RTVTLEELLGE-YDAVFIGTGAGTPKL 248
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ I L + + Y++ FL R+ + PI G VIV+GAG+TA D
Sbjct: 249 LNIPGILLDRI--YSANEFLTRINLMKAYEF----PEYDTPIAVGKKVIVIGAGNTAMDA 302
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR G + V + +R+G ++ A EEV+ A EE +FL F+ PV+ + + K+ +
Sbjct: 303 ARSALRLGCD-VTIAYRRGEEDVSARIEEVEHAKEEGVKFLYFVQPVEFIGDEKGKVKAV 361
Query: 222 QFNRTE----QNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
+F + E ++ +G+ + + + ++A+ +I A G L N ++ +K + G
Sbjct: 362 KFEKMEPLEERDSRGKRKIRPTGEYVTVEADTVIIAIG--LEPNRIISEESGLKTNANGT 419
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DGK AA I +YI+ K
Sbjct: 420 LVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAKAIDEYIRAKK 468
>gi|294786896|ref|ZP_06752150.1| dihydroorotate oxidase [Parascardovia denticolens F0305]
gi|294485729|gb|EFG33363.1| dihydroorotate oxidase [Parascardovia denticolens F0305]
Length = 353
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 563 LSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRN 622
L + + + ++ DD+ ++ +K + AD LE+N+SCP+ G+A G DP +
Sbjct: 138 LGATVVTNVAGHSNDDYCQVVEKLADSPADMLEINVSCPN---VSAGGMAVGSDPAALEV 194
Query: 623 ISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA 682
+ +R P VKLTPNIT+IT +A+AA + AD +S INT G+ G P A
Sbjct: 195 LMKRLRPLADKPLIVKLTPNITDITTVARAAVDNGADALSLINTFVGMRIDIRTGRPIIA 254
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
GGVSG A PM L V + + P+ P++GIGGI +A+ AL+F+ AGA+AV
Sbjct: 255 ------NVTGGVSGPAIHPMALAMVYKVRQALPHIPLIGIGGIATAEDALEFLYAGANAV 308
Query: 743 QICSA 747
++ SA
Sbjct: 309 EVGSA 313
>gi|315226530|ref|ZP_07868318.1| dihydroorotate dehydrogenase [Parascardovia denticolens DSM 10105 =
JCM 12538]
gi|315120662|gb|EFT83794.1| dihydroorotate dehydrogenase [Parascardovia denticolens DSM 10105 =
JCM 12538]
Length = 357
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 563 LSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRN 622
L + + + ++ DD+ ++ +K + AD LE+N+SCP+ G+A G DP +
Sbjct: 142 LGATVVTNVAGHSNDDYCQVVEKLADSPADMLEINVSCPN---VSAGGMAVGSDPAALEV 198
Query: 623 ISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA 682
+ +R P VKLTPNIT+IT +A+AA + AD +S INT G+ G P A
Sbjct: 199 LMKRLRPLADKPLIVKLTPNITDITTVARAAVDNGADALSLINTFVGMRIDIRTGRPIIA 258
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742
GGVSG A PM L V + + P+ P++GIGGI +A+ AL+F+ AGA+AV
Sbjct: 259 ------NVTGGVSGPAIHPMALAMVYKVRQALPHIPLIGIGGIATAEDALEFLYAGANAV 312
Query: 743 QICSA 747
++ SA
Sbjct: 313 EVGSA 317
>gi|333988319|ref|YP_004520926.1| dihydroorotate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826463|gb|AEG19125.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
SWAN-1]
Length = 300
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 592 DALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAK 651
DA+ELN+SCPH MG G G A GQDP++ I V+ +V+ P FVKLTPN+T+I ++A
Sbjct: 116 DAVELNVSCPHAMG--GCGAAIGQDPDLTAEIVKAVKKNVRCPVFVKLTPNVTDIVEVAV 173
Query: 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIA 711
AA + D ++ IN++ M + + P + + +GG+SG A +P+ L+ V +
Sbjct: 174 AAEKAGCDALTMINSLGPGMRIDLE-TAKPILSNR----FGGMSGPAVKPVALRCVFDVY 228
Query: 712 KMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS 771
+ N PI+G+GGI ++F+ AGA VQ+ +AV + D TGL+ + K
Sbjct: 229 EAV-NVPIIGVGGITDYKDVVEFLYAGARVVQVGTAVMYHGLDIFADLCTGLEKFIIEKG 287
>gi|315231294|ref|YP_004071730.1| dihydroorotate dehydrogenase [Thermococcus barophilus MP]
gi|315184322|gb|ADT84507.1| dihydroorotate dehydrogenase [Thermococcus barophilus MP]
Length = 299
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 13/200 (6%)
Query: 570 IMCTYNKDD--WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV 627
I+ + KD+ + L++K + ADA ELNLSCPH +G G+ GQ+PEMV + V
Sbjct: 93 IVSIFGKDEREFAFLAEKLSEV-ADAFELNLSCPHA---KGYGMEIGQNPEMVYKVVKAV 148
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ + P KLTPNI +IT I AA +AD VSAINTV +++ D + + K
Sbjct: 149 KDTTDKPVIAKLTPNIDDITKIGLAAERAEADAVSAINTVK---AVAIDIYARRPILSNK 205
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+ GG SG +P+ L+AV +AK+ + I+G+GGI + A++F+ AGA A+QI +A
Sbjct: 206 V---GGYSGPGIKPIALRAVYDLAKVL-DIDIIGVGGITTWQDAVEFLMAGAKALQIGTA 261
Query: 748 VQNQDFTVVDDYITGLQTLL 767
V + F V + G+ L
Sbjct: 262 VSLRGFKVFKEINEGIGRFL 281
>gi|222099792|ref|YP_002534360.1| putative oxidoreductase [Thermotoga neapolitana DSM 4359]
gi|221572182|gb|ACM22994.1| Glutamate synthase, beta subunit [Thermotoga neapolitana DSM 4359]
Length = 467
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 22/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV ++ LGV+I ++ + I ++ L ++ Y AIFIG G
Sbjct: 182 IPEFRLPKRIVEREVNYIEKLGVRIFLN-TVVGKTIKVKDLLEE-YDAIFIGTGAGT--- 236
Query: 104 IPIFQGL--TEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
P F G+ T G Y++ FL RV P+ G V V+GAG+TA
Sbjct: 237 -PKFMGIPGTNLNGVYSANEFLTRVNLMKAYLF----PDYDTPVRVGKRVAVIGAGNTAM 291
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A SALR GA KV +V+R+ + A EE A EE EFL PV+ +V+
Sbjct: 292 DAARSALRLGAEKVYIVYRRTENEMPARREEYHHALEEGIEFLWLTLPVRYLGDANGNVE 351
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ +++ + + V E L+ + +I A G N VL + P ++L++
Sbjct: 352 AMECVRMELKGVDRSGRPKPVPVEGSNFVLEIDMVIEAIGQG--PNRVLLSEFPGLELNE 409
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
GY + + T ATSV GVF GGD + T +E++ GK AA IH Y+
Sbjct: 410 RGYIKTDRDTGATSVRGVFAGGDIVTGAATVIEAMGAGKRAAQFIHSYL 458
>gi|423349031|ref|ZP_17326687.1| dihydroorotate dehydrogenase [Scardovia wiggsiae F0424]
gi|393703260|gb|EJD65461.1| dihydroorotate dehydrogenase [Scardovia wiggsiae F0424]
Length = 337
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
Query: 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++ DD+ + +K + AD LE+N+SCP+ G+A G DP + + +R
Sbjct: 136 HSDDDYCRVVEKLADSQADMLEINVSCPN---VSAGGMAVGSDPAALERLMKKLRPLTGK 192
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +KLTPNIT+IT +A+AA + AD +S INT G+ G P A GG
Sbjct: 193 PMIIKLTPNITDITVVARAAADNGADALSMINTFVGMRINVDTGKPIIA------NITGG 246
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
VSG A PM L V + + P PI+GIGGI +AD AL+F+ AGA+AV++ SA
Sbjct: 247 VSGPAIHPMALAFVYKVRQALPTMPIIGIGGISNADDALEFLYAGANAVEVGSA 300
>gi|237746522|ref|ZP_04577002.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes HOxBLS]
gi|229377873|gb|EEO27964.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes HOxBLS]
Length = 415
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 16/254 (6%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++IASIM + + D+W L++K GAD +E N SCP M MG GQ PE+V +
Sbjct: 102 VMIASIMGS-DDDEWRTLAQKVTDTGADIIECNFSCPQ-MTSSAMGSDVGQSPELVARYT 159
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
V + +P K+TPNI ++ A AA A G++AINT+ + + + +P P V
Sbjct: 160 EAVCRATHLPVLAKMTPNIGHMELPAIAAVNAGAKGIAAINTIKAITRIDTECLSPMPVV 219
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ ++ + K P + P+ GIGGI + AL+F+ G+
Sbjct: 220 NGK--SSISGYSGPAIKPIALRFIAQM-KQHPELRHIPVSGIGGIVTWKDALEFLLVGSS 276
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDK 799
VQ+ SAV + +V+D +GL + + L G G++ P V PA D+
Sbjct: 277 TVQVTSAVMEYGYRIVEDLASGLSHFMDENGIERLSGLVGKALPNIV-----PADDI-DR 330
Query: 800 EGKAIPNFGEYKKI 813
+ + IP + I
Sbjct: 331 DFRIIPEIDASRCI 344
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 488 ILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPET 547
I + ++G+A+ + ++D +++ I+ CI CG+CY++C D G+QAI + T
Sbjct: 308 IERLSGLVGKALPNIVPADDIDRDFRIIPEIDASRCIGCGRCYVSCFDGGHQAIDWDDYT 367
Query: 548 HQAHVTDECTGCTLCLSI 565
+ ++C GC LCL++
Sbjct: 368 RTPSINEQCVGCHLCLNV 385
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI- 405
D+S++ G++ NPF L+S+P ++ MV +AFE GWG V KT + + SPR
Sbjct: 4 DLSIDFLGIRCENPFFLSSSPVSSDYVMVAKAFETGWGGVVYKTAGIF--LPDECSPRFD 61
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEK 431
+ G GP G F N+E+IS+K
Sbjct: 62 ITGQPG----GPWTG-FKNMEMISDK 82
>gi|308270490|emb|CBX27102.1| Glutamate synthase [NADPH] small chain [uncultured Desulfobacterium
sp.]
Length = 460
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 21/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V EV ++ LG K+EC ++ R +++E+L GY AIF+G+G
Sbjct: 179 IPEFRLPKEIVFSEVAFLEKLGAKVECN-NVVGRTVSLEELFAQGYDAIFVGVGAG---- 233
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F + E +G ++ +L R A K L + PI++G V+VLGAG+ A
Sbjct: 234 LPTFMNIPGENLIGILSANEYLTR-ANLMKAYLF---PEYDTPIVRGKNVVVLGAGNVAM 289
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIA 219
D A +A+R GA+ V +V+R+ + A E+ A EE EF +P Q + ++
Sbjct: 290 DSARTAMRLGADNVKIVYRRSRQEMPARKAEIHHADEEGIEFFLLTAPTQFFGDEKGRLT 349
Query: 220 GMQFNRTE-----QNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
GM+ + E Q+ + V + K+ + +I A G+ N +L P + L+K
Sbjct: 350 GMECLKMELGEPDQSGRRRPVPVKGSEFKMDCDLVIVAVGTG--PNPLLTQSTPELTLNK 407
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
GY + T TS+ GV+ GGD S T + ++ G+ AA I KY+
Sbjct: 408 RGYLVADDETGKTSMKGVWAGGDIVTGSATVILAMGAGRKAADSIDKYL 456
>gi|16078618|ref|NP_389437.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309428|ref|ZP_03591275.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313753|ref|ZP_03595558.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318677|ref|ZP_03599971.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322949|ref|ZP_03604243.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. SMY]
gi|402775799|ref|YP_006629743.1| dihydroorotate dehydrogenase catalytic subunit [Bacillus subtilis
QB928]
gi|452914620|ref|ZP_21963247.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Bacillus subtilis MB73/2]
gi|131720|sp|P25996.1|PYRDB_BACSU RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|143392|gb|AAA21272.1| dihydroorotase dehydrogenase [Bacillus subtilis]
gi|2633927|emb|CAB13428.1| dihydroorotate dehydrogenase (catalytic subunit) [Bacillus subtilis
subsp. subtilis str. 168]
gi|402480981|gb|AFQ57490.1| Dihydroorotate dehydrogenase (catalytic subunit) [Bacillus subtilis
QB928]
gi|407958961|dbj|BAM52201.1| dihydroorotate dehydrogenase 1B [Synechocystis sp. PCC 6803]
gi|407964538|dbj|BAM57777.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis BEST7003]
gi|452117040|gb|EME07435.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Bacillus subtilis MB73/2]
Length = 311
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
DD++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 DDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++M N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQMV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|91773205|ref|YP_565897.1| dihydroorotate dehydrogenase 1B [Methanococcoides burtonii DSM
6242]
gi|91712220|gb|ABE52147.1| Dihydroorotate dehydrogenase, catalytic subunit [Methanococcoides
burtonii DSM 6242]
Length = 300
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 17/212 (8%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI N +D++++++ + A ELN+SCPH G G G D MV +I+
Sbjct: 92 VIASIFGG-NAEDFVKVAEGLADSEPAAFELNVSCPH---AEGYGATIGTDTCMVESITA 147
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V +V +P +VKLTPN+T+I I KAA G AD V AINT+ G M++ + +P +G
Sbjct: 148 AVCDAVDVPVWVKLTPNVTDIKAIGKAAQNGGADAVVAINTLRG-MAIDINSG-YPILGN 205
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ +GG+SG A +P+ +K V + + + P++G+GG+ + + A++ + AGA AVQI
Sbjct: 206 R----FGGLSGPAVKPVAIKCVYDLYEAL-DIPVIGVGGVSTWEDAVEMMMAGASAVQIG 260
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQLKGW 777
SAV + + D +G++ L Q KG+
Sbjct: 261 SAVH-ESVDIFSDIASGIELFL-----QDKGY 286
>gi|268319399|ref|YP_003293055.1| hypothetical protein FI9785_918 [Lactobacillus johnsonii FI9785]
gi|262397774|emb|CAX66788.1| pyrD [Lactobacillus johnsonii FI9785]
Length = 307
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 570 IMCTYNKDD---WLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + +D +LE++KK +G +ALE+N+SCP+ + + GM + G P++V ++
Sbjct: 99 IMASVGGEDEAGYLEVAKKLSDSGLVNALEINVSCPN-VNQGGM--SFGVYPDVVEELTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++S VKIP +VKLTPN+T+IT IAKAA G ADG+S INT+ G M + + P +G
Sbjct: 156 KIKSVVKIPIYVKLTPNVTDITQIAKAAENGGADGLSLINTLLG-MEIDVETR-KPVLGH 213
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ V + + PI+G+GGI SA ++FI AGA+AV +
Sbjct: 214 N----IGGLSGEAVKPIAIRMVHQV-RESTTLPIIGMGGISSAKDVIEFILAGANAVAVG 268
Query: 746 SA 747
+A
Sbjct: 269 TA 270
>gi|384196993|ref|YP_005582737.1| dihydroorotate dehydrogenase 1B [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333109897|gb|AEF26913.1| dihydroorotate dehydrogenase 1B [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 323
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ E+ +K + D LE+N+SCP+ G++ G DP + N+
Sbjct: 115 FVISNVAGHCDDDYAEVVEKLADSDVDMLEINVSCPN---VSAGGMSVGADPVALANLMD 171
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ +G P A
Sbjct: 172 RLRPLTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRNGEPIIA--- 228
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P+ PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 229 ---NVTGGVSGPAVLPIGLAAVYHTRTVLPDIPIIGLGGIDSGEKALEYLYAGANAVEVG 285
Query: 746 SA 747
+A
Sbjct: 286 AA 287
>gi|291532476|emb|CBL05589.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Megamonas hypermegale ART12/1]
Length = 453
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ +K LGV + + T +IT+++L G+ AIFIG G +
Sbjct: 167 IPEFRLPKQVVRREVKRIKKLGVDFKLNIMVGT-EITVDELFNQGFDAIFIGTGNALSKS 225
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
+PI + G + FL V S+ + +PI +G V+V+G G+TA D
Sbjct: 226 LPIDGAKLK--GVIQATYFLQMVELSNSNSV----DPNEVPIKEGDEVVVIGGGNTAMDA 279
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
A +A+RCGA V VV R+ ++ A+ E+ A EE E PV++ +D + G++
Sbjct: 280 ARTAMRCGAKSVKVVNRRREEDMAALKSEIDAAKEEGVEIHALRGPVEITGED-AVTGIK 338
Query: 223 FNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYT 282
+ E +E + V D + R AN II A G ++++ + +D+ G+ +
Sbjct: 339 CSVREFDEALDKVVDTDGREYFSANKIIIAIGQKPASR-IVDSTSGIDVDENGFVKTREK 397
Query: 283 TMATSV-PGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
++ GVF GGD N T V ++ D + A I +Y++ K
Sbjct: 398 PYGMTMRHGVFSGGDVVNGPATVVVAMKDAQKVAQGIAQYVEAK 441
>gi|387927097|ref|ZP_10129776.1| dihydroorotate dehydrogenase 1B [Bacillus methanolicus PB1]
gi|387589241|gb|EIJ81561.1| dihydroorotate dehydrogenase 1B [Bacillus methanolicus PB1]
Length = 313
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 114/186 (61%), Gaps = 17/186 (9%)
Query: 576 KDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
++D++ ++K+ KA ALELN+SCP+ + G+A G PE+ +N++ V+ ++P
Sbjct: 105 EEDYVAVAKEISKAPNVHALELNISCPN---VKTGGIAFGTIPEVAKNLTKQVKEVSEVP 161
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+TNI +IAKA +G ADG++ INT+ G+ G P A GT GG+
Sbjct: 162 VYVKLSPNVTNIVEIAKAVEDGGADGLTMINTLVGMRIDVKSGKPILANGT------GGL 215
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT 754
SG A +P+ ++ + +++ + PI+G+GGI SA+ +++ AGA AV + +A
Sbjct: 216 SGPAIKPVAIRMIYEVSQHV-SLPIVGMGGIQSAEDVIEYFYAGASAVAVGTA------N 268
Query: 755 VVDDYI 760
+D YI
Sbjct: 269 FIDPYI 274
>gi|159904860|ref|YP_001548522.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis C6]
gi|159886353|gb|ABX01290.1| dihydroorotate dehydrogenase family protein [Methanococcus
maripaludis C6]
Length = 304
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 570 IMCTYNKDDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV 627
I Y K+D E K E G D LELN+SCPH G G G + GQDP + +N+ V
Sbjct: 98 IGSIYGKNDS-EFQKAAEIIGNYVDVLELNISCPHAGG--GYGSSIGQDPGLCKNVVSAV 154
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ IP KLTPN+T+I +IA A ADG+ AINT+ M + + + P +G +
Sbjct: 155 KDVSDIPVIAKLTPNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIE-SGVPILGNR- 212
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ +K V I + P++G+GGI + D A++F+ AGA AVQ+ +
Sbjct: 213 ---VGGMSGKAIKPIAVKNVYDICSAV-DVPVIGVGGITTGDDAIEFMMAGASAVQVGTG 268
Query: 748 VQNQDFTV 755
V + + +
Sbjct: 269 VYYRGYDI 276
>gi|227892690|ref|ZP_04010495.1| dihydroorotate dehydrogenase 1B [Lactobacillus ultunensis DSM
16047]
gi|227865467|gb|EEJ72888.1| dihydroorotate dehydrogenase 1B [Lactobacillus ultunensis DSM
16047]
Length = 307
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 114/174 (65%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK + +ALE+N+SCP+ RG G++ G P++V ++ ++ V I
Sbjct: 107 SEDDYVEVAKKLSNSKLVNALEINVSCPNV--ARG-GMSFGVHPDVVEELTRNIKKVVNI 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+IT IA+AA +G ADG+S INTV G M + P +G GG
Sbjct: 164 PIYVKLTPNVTDITVIARAAEKGGADGISMINTVLG-MEIDVKTR-KPILGHN----MGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + + PI+G+GGI+SA ++F+ AGA+AV + +A
Sbjct: 218 LSGEAIKPIAIRMISQV-RQATDLPIIGMGGIESAQDVVEFMLAGANAVAVGTA 270
>gi|319937711|ref|ZP_08012114.1| hypothetical protein HMPREF9488_02950 [Coprobacillus sp. 29_1]
gi|319807146|gb|EFW03760.1| hypothetical protein HMPREF9488_02950 [Coprobacillus sp. 29_1]
Length = 464
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 146/294 (49%), Gaps = 24/294 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ V +GV + + R ITI++L++ GY AIF+G G
Sbjct: 183 IPEFRLPKALVQQEVDGVAQMGVDFQT-NVVVGRSITIDELQEQGYEAIFVGSGAG---- 237
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPI---LKGTVIVLGAGDT 158
+P FQG+ E G Y + FL RV L G + + P + TV V+GAG+
Sbjct: 238 LPRFQGIPGENLNGVYAANEFLTRV------NLMKGYEFPNHPTPVKISDTVCVIGAGNV 291
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A D A +A R GA +V +V+R+G + A EEV A EE F +PV+++ +D +
Sbjct: 292 AMDAARTAKRLGAKEVYIVYRRGAEEVPARAEEVHHAKEEGIIFKLLTNPVKIEGEDGWV 351
Query: 219 AGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLD 272
M+ E E + V E ++ +I + G + N ++ P +
Sbjct: 352 KSMECVEMELGEPDDSGRRRPVVKEGSNFTIETGTVIVSIGQS--PNPLIRQTTPGLDTQ 409
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
K+G V TM TS GV+ GGD + T + ++ GKTAA I + +++++
Sbjct: 410 KWGGIIVEEETMKTSKDGVYAGGDVVTGAATVILAMGAGKTAAQAIDEALKKED 463
>gi|435853797|ref|YP_007315116.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
gi|433670208|gb|AGB41023.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
Length = 461
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 22/292 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V EVE +KDLGV+I+ + + + +++L +GY A+F+G G
Sbjct: 180 IPEFRLPKEIVQDEVEKIKDLGVEIKLNKVVG-KIKGVDELFAEGYDAVFVGTGAG---- 234
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F GL E G Y++ FL RV K P+ G V V+GAG+ A
Sbjct: 235 LPKFLGLEGENLNGVYSANEFLTRVNLMKAYKF----PKYKTPVHVGDKVAVVGAGNVAM 290
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNKIA 219
D A +ALR GA + ++V+R+G + A EE+ A EE EF +P ++ +D +
Sbjct: 291 DAARTALRLGAKESMIVYRRGREEMPAREEEIHHAQEEGVEFKLLNNPTRILGDQDGFVR 350
Query: 220 GMQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
GM+ + E E+ E + E ++ + +I A G N +L P +K
Sbjct: 351 GMECVKMELGERDESGRRRPIAIEGSEFEIDVDTVIMAIGQN--PNPILLQDTPEIKTTD 408
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+G + + + TS GVF GGD + T +E++ GK AA I +YI+ +
Sbjct: 409 WGTIKTD-ESKETSKEGVFAGGDVVTGAATVIEAMGAGKQAAQSIDQYIKSR 459
>gi|418033299|ref|ZP_12671776.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351469447|gb|EHA29623.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 308
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
DD++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 101 DDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 157
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 158 YVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 211
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++M N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 212 GPAVKPVAIRMVYEVSQMV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 262
>gi|309803608|ref|ZP_07697700.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 11V1-d]
gi|309805602|ref|ZP_07699645.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 09V1-c]
gi|312870729|ref|ZP_07730836.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
3008A-a]
gi|312872879|ref|ZP_07732941.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2062A-h1]
gi|312875152|ref|ZP_07735165.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2053A-b]
gi|315653078|ref|ZP_07906006.1| dihydroorotate oxidase [Lactobacillus iners ATCC 55195]
gi|329919621|ref|ZP_08276610.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners SPIN 1401G]
gi|349612141|ref|ZP_08891368.1| dihydroorotate dehydrogenase [Lactobacillus sp. 7_1_47FAA]
gi|308164356|gb|EFO66611.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 11V1-d]
gi|308165103|gb|EFO67343.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 09V1-c]
gi|311089259|gb|EFQ47690.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2053A-b]
gi|311091613|gb|EFQ49995.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2062A-h1]
gi|311093741|gb|EFQ52078.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
3008A-a]
gi|315489613|gb|EFU79247.1| dihydroorotate oxidase [Lactobacillus iners ATCC 55195]
gi|328937426|gb|EGG33848.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners SPIN 1401G]
gi|348609157|gb|EGY59118.1| dihydroorotate dehydrogenase [Lactobacillus sp. 7_1_47FAA]
Length = 306
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 125/206 (60%), Gaps = 19/206 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
LIAS+ + D++ +SKK +G +ALE+N+SCP+ + GM L G DP +V ++
Sbjct: 99 LIASVGGS-QISDYITISKKLSDSGLLNALEINVSCPN-VAAGGMHL--GTDPVVVEKLT 154
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
++ V IP ++KLTPN+TNI +IA+AA G ADG+S INT L+ L D +
Sbjct: 155 SEIKKVVNIPVYIKLTPNVTNIVEIAQAAERGGADGLSMINT---LLGLGID------IK 205
Query: 685 TKKLTT---YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
T K T +GG SG+A +P+ ++ V+ + + PI+G+GGI++A+ ++F+ AGA A
Sbjct: 206 THKATLGNGFGGWSGSAIKPVAVRMVAQVHQAV-KLPIIGMGGIETAEDIVEFMLAGASA 264
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
V + +A +D + + L+TLL
Sbjct: 265 VAVGTA-HFKDGLAIPHLVADLETLL 289
>gi|169350862|ref|ZP_02867800.1| hypothetical protein CLOSPI_01636 [Clostridium spiroforme DSM 1552]
gi|169292448|gb|EDS74581.1| glutamate synthase (NADPH), homotetrameric [Clostridium spiroforme
DSM 1552]
Length = 462
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 24/293 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ V LGVK E + R +TI++L++ GY IFIG G
Sbjct: 183 IPEFRLPKSLVQKEVDSVASLGVKFETNVVVG-RSVTIDELQEQGYQGIFIGSGAG---- 237
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPI---LKGTVIVLGAGDT 158
+P FQ + E G Y + FL RV L G + + P + TV V+GAG+
Sbjct: 238 LPRFQNIPGENLNGVYAANEFLTRV------NLMKGYEFPNHPTPVKITETVCVIGAGNV 291
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A D A +A R GA V +V+R+G + A EEV A EE F +PV+++ +D +
Sbjct: 292 AMDAARTAKRLGAKNVYIVYRRGEEEVPARAEEVHHAKEEGIIFKLLTNPVKINGEDGWV 351
Query: 219 AGM---QFNRTEQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLD 272
M + E +E G + E ++ +I + G + N ++ P +
Sbjct: 352 KSMECVEMELCEPDESGRRRPIAKEGSNFIIETGTVIVSIGQS--PNPLIRQTTPGLDTQ 409
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
K+G V+ TM TS GV+ GGD + T + ++ GK+AA + +Y+ K
Sbjct: 410 KWGGIIVDEETMKTSKEGVYAGGDVVTGAATVILAMGAGKSAAKAMDEYLSTK 462
>gi|410667164|ref|YP_006919535.1| NADH-quinone oxidoreductase subunit G 2 [Thermacetogenium phaeum
DSM 12270]
gi|409104911|gb|AFV11036.1| NADH-quinone oxidoreductase subunit G 2 [Thermacetogenium phaeum
DSM 12270]
Length = 1131
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 44/304 (14%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGK----- 98
IPQYRLP + ++ E+EL+ +GV+I + RDI+++ LR++ + A+FIGIG
Sbjct: 236 IPQYRLPKEILDREIELIARMGVRIVTNTKIG-RDISLDYLREN-FQAVFIGIGAWRSSS 293
Query: 99 ---PNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGA 155
P N+ + G+ FL RVA S G+ V V+G
Sbjct: 294 LGCPGENLEGVVGGID----------FLRRVAHGSDVGI------------GERVAVVGG 331
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV---- 211
G+TA D A +A+R GA KV+VV+R+ + A EVQ A EE EF +SP++V
Sbjct: 332 GNTAMDAARTAVRLGARKVMVVYRRTRAEMPAEDVEVQEAMEEGVEFRFLVSPLEVLGDD 391
Query: 212 --DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPV 269
V+ ++ MQ + + + + ++ + +I+A G D + +
Sbjct: 392 LGKVRAIRLRRMQLGEPDASGRRRPLPIPGAEEEIAVDMVIAAIGQ---QTDAC-GLGGL 447
Query: 270 KLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLT 329
L + G V+ T+ T++PGVF GGD +E+V G+ A I+ Y+ K L
Sbjct: 448 DLTRKGTIAVDPVTLQTNIPGVFAGGDAVTGPGIAIEAVAQGQQAGAAINSYLAGK--LE 505
Query: 330 VPDK 333
P K
Sbjct: 506 APRK 509
>gi|15921375|ref|NP_377044.1| dihydropyrimidine dehydrogenase [Sulfolobus tokodaii str. 7]
gi|15622161|dbj|BAB66153.1| dihydropyrimidine dehydrogenase [Sulfolobus tokodaii str. 7]
Length = 350
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + +W+ L++ E GAD LELN CPHG E+ G GQ ++V+ +
Sbjct: 103 IIVSIMGGPDYSEWIRLARWAEDRGADMLELNFGCPHGEPEKRTGAFIGQHADLVQEYTK 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
V SSV IP KLTPNIT+I + AKAA A V+AINTV+G++++ + P P +
Sbjct: 163 EVVSSVGIPVIAKLTPNITDIRETAKAAENAGAKAVTAINTVNGVIAVDIERAQPLPDIN 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+SG A +P+GL AVS I + I G+GGI A+++I GA VQ
Sbjct: 223 GYSGYGG--ISGPAVKPIGLAAVSKIYTS-TSLQISGVGGIFDWRDAVEYIMMGATTVQS 279
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLK 770
+ + F ++++ L++ + K
Sbjct: 280 VTYTILKGFEFINEWKKELESFMERK 305
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
++D+SV G+ FPNPF + S P T + A GWG V KT D + S R
Sbjct: 1 MIDLSVTFQGITFPNPFLVGSGPTTGNPPKIISAIRAGWGGVVVKTIG---DSIVRKSVR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISE 430
+ T R+ E +F N+ELI+E
Sbjct: 58 PMYATIRRNR---EIIAFENLELITE 80
>gi|148270281|ref|YP_001244741.1| putative oxidoreductase [Thermotoga petrophila RKU-1]
gi|281412587|ref|YP_003346666.1| glutamate synthase (NADPH), homotetrameric [Thermotoga naphthophila
RKU-10]
gi|147735825|gb|ABQ47165.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Thermotoga
petrophila RKU-1]
gi|281373690|gb|ADA67252.1| glutamate synthase (NADPH), homotetrameric [Thermotoga naphthophila
RKU-10]
Length = 468
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 22/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV ++ LGV ++ + + +++L + Y A+FIG G
Sbjct: 183 IPEFRLPKGIVEREVNYIRKLGVNFYLN-TVVGKTVKVKELLSE-YDAVFIGTGAGT--- 237
Query: 104 IPIFQGL--TEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAF 160
P F G+ T G Y++ FL RV + PI G V V+GAG+TA
Sbjct: 238 -PKFMGIPGTNLNGVYSANEFLTRVNLMKAYLF----PEYDTPIRVGKKVAVIGAGNTAM 292
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A SALR GA KV +V+R+ + A EE A EE EFL P++ +V+
Sbjct: 293 DAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYIGDANGNVE 352
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ + + + V E L+ + +I A G N VL + P +KL++
Sbjct: 353 AVECVRMELKEADGSGRPRPVPIEGSNFILEVDMVIEAIGQG--PNRVLLSEFPGLKLNE 410
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+GY + + T ATSV GVF GGD + T ++++ GK AA IH Y+
Sbjct: 411 HGYIKADEDTGATSVKGVFAGGDIVTGAATVIKAMGAGKKAAQFIHSYL 459
>gi|409095951|ref|ZP_11215975.1| dihydropyrimidine dehydrogenase subunit A [Thermococcus zilligii
AN1]
Length = 480
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 158/293 (53%), Gaps = 24/293 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E+E ++ LGV+I + + + ITIE+L ++ Y A+FIG G +
Sbjct: 200 IPEFRLPKSVVGSEIEKLRKLGVRILTDHVVG-KTITIEELLQE-YDAVFIGSGAGTPKL 257
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGL--CGGCKKESLPILKGT-VIVLGAGDTAF 160
I G+ G YT+ FL RV C P+ G VIV+GAG+TA
Sbjct: 258 IDA-PGINLN-GIYTANEFLTRVNLMKAHEFPEC------DTPVYVGRKVIVIGAGNTAM 309
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIA 219
D A SA R GA +V +V+R+G ++ A EEV+ A EE +F F++PV+ + ++ K+
Sbjct: 310 DAARSARRFGA-EVTIVYRRGEEDVSARVEEVEHAREEGIKFEFFLNPVEFIGDENGKVR 368
Query: 220 GMQFNRT---EQNEKG--EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
++F + E+ + G + + + + L+A+ +I A G N ++ +K+++
Sbjct: 369 AVKFEKMKALEERDAGGKKKIAGTGEYVTLEADTVIIAIGKH--PNRLIINTPGLKVER- 425
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
G V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +K
Sbjct: 426 GKIVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLTKKRE 477
>gi|330508198|ref|YP_004384626.1| dihydroorotate dehydrogenase, catalytic subunit [Methanosaeta
concilii GP6]
gi|328929006|gb|AEB68808.1| dihydroorotate dehydrogenase, catalytic subunit [Methanosaeta
concilii GP6]
Length = 299
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 126/209 (60%), Gaps = 15/209 (7%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI + + +++ ++S+ + ADALELNLSCPH G G+ P++V +++
Sbjct: 95 VIASIFAS-SAEEFAQISRNLD---ADALELNLSCPH---AEKYGSELGRYPDLVESVTG 147
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+++ +P +VKLTPN +I ++ AA G AD V AINT+ M++ + +P +G
Sbjct: 148 AVKAASSVPVWVKLTPNTADILELGLAAQRGGADAVVAINTLKA-MAIDIE-TGYPILGN 205
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ +GG+SG A +P+ ++AV +A P++G+GGI S + A++ I AGA A+Q+
Sbjct: 206 R----FGGLSGRAIKPVAVRAVYDLASRL-EIPVIGVGGISSWEDAVEMIMAGASAIQVG 260
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQL 774
+A+ Q + + ++ +GL L KS L
Sbjct: 261 TALL-QGYGIFEEIASGLSAYLERKSITL 288
>gi|374317450|ref|YP_005063878.1| NADPH-dependent glutamate synthase subunit beta-like oxidoreductase
[Sphaerochaeta pleomorpha str. Grapes]
gi|359353094|gb|AEV30868.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Sphaerochaeta pleomorpha str. Grapes]
Length = 793
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 33/311 (10%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGK--PNA 101
IP++RL ++ ++E + G+++ + L +D T++ L+ +G+ AIF+ +G P +
Sbjct: 299 IPEFRLSGKIMDRQIEFLVSTGIRVSTSQVLG-KDFTLDSLKHEGFEAIFLAVGSWVPKS 357
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
I Q G Y FL V K+ P LKGTV V+G G+TA D
Sbjct: 358 LGIEGEQHRNVLSGIY----FLEAV------------KRTGSPNLKGTVAVIGGGNTAID 401
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG- 220
A +ALRCGA V +++R+ + + EE++ A E E SP + ++ N + G
Sbjct: 402 AARTALRCGAKHVALLYRRTQNEMPSEAEEIEDAKREGVELHFLTSPKKAVLEGNTLVGL 461
Query: 221 ----MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKY 274
MQ + + + +E KA+++I+A G D ++ LEA+KP K +
Sbjct: 462 QCCKMQLGDLDASGRRRPIEIPGSEFLFKADWVIAAIGQ---DQNLKGLEALKPTKGNGI 518
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH-KYIQEKNNLTVPDK 333
EVN TM TS+ ++ GGD + T VE++ G+ A+ I ++EK + P
Sbjct: 519 ---EVNPLTMETSIERIYAGGDIVSGPATAVEAIAAGRLASHAIEASLLKEKKAMVSPTA 575
Query: 334 PCLPKFMSHID 344
L + I+
Sbjct: 576 QILRPELREIN 586
>gi|296454107|ref|YP_003661250.1| dihydroorotate dehydrogenase family protein [Bifidobacterium longum
subsp. longum JDM301]
gi|296183538|gb|ADH00420.1| dihydroorotate dehydrogenase family protein [Bifidobacterium longum
subsp. longum JDM301]
Length = 323
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ + +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 115 FVISNVAGHCDDDYAAVVEKLADSDADMLEINVSCPN---VSAGGMSVGTDPVALANLMD 171
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPNIT+IT A+AA E AD +S INT+ G+ G P A
Sbjct: 172 RLRPMTDKPMIVKLTPNITDITVPARAAVEHGADALSMINTLKGMRINIRTGQPIIA--- 228
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 229 ---NVTGGVSGPAVLPVGLAAVYRVRTALPEIPIIGLGGIDSGEKALEYLYAGANAVEVG 285
Query: 746 SA 747
+A
Sbjct: 286 AA 287
>gi|392411256|ref|YP_006447863.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Desulfomonile tiedjei DSM 6799]
gi|390624392|gb|AFM25599.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Desulfomonile tiedjei DSM 6799]
Length = 653
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP YR P D + E+ ++ LGV+ + L +D TI+ L G+ ++F+G+G ++
Sbjct: 298 IPPYRQPRDVLQKEIVQIQRLGVEFRFKARLG-KDFTIQDLFDQGFKSVFLGVGAHKSSA 356
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ + + G ++ R KK G I+ G G+TA DCA
Sbjct: 357 LALKEEKQRIKGVFSGGIDFLRDLNLGKKIQVGE-----------NAIIAGGGNTAIDCA 405
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
+ LR GA++V VV+R+ + A EEV+ + EE +FL PV V ++ ++ G++
Sbjct: 406 RTCLRMGASQVTVVYRRTEREMPADLEEVEDSREEGIKFLFLTQPVAVLSENGRMTGLRC 465
Query: 224 NRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
R E E + V E L + +I A G + D + L ++ + G +
Sbjct: 466 IRMELGEPDRSGRRRPVPVEGTEFDLAGDTLIPAIGQ-IADLEWLSGDDNIQFSRKGAIK 524
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
V+ TM TS PGVF GD + T V + GK AA IH+Y+
Sbjct: 525 VDPVTMMTSRPGVFAAGDAVSGPLTVVHGLAGGKRAAHMIHQYV 568
>gi|224369753|ref|YP_002603917.1| protein GltD1 [Desulfobacterium autotrophicum HRM2]
gi|223692470|gb|ACN15753.1| GltD1 [Desulfobacterium autotrophicum HRM2]
Length = 659
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 144/291 (49%), Gaps = 22/291 (7%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
++ IP+YRLP + EV +++ LG +I + L RD T++ L + Y A+F+GIG
Sbjct: 298 ATGIPEYRLPKAVLAKEVSIIETLGGRIFYNQKLG-RDFTLDDLSQRCYAAVFLGIGTHK 356
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTA 159
++ + E G+ FL R+ +P+ G ++V+G G+ A
Sbjct: 357 GKMMEVAYEDPELEGYDFGVDFLLRINHDYID--------RGIPMSLGQKMVVVGGGNVA 408
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
DCA SALR G N+V +V+R+ + A EE++ A EE F +P ++ VKD KI
Sbjct: 409 MDCARSALRMGVNEVHLVYRRSRKEMPADHEEIEAAMEEGVVFHFLTNPTKIIVKDGKIE 468
Query: 220 G-----MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP---VKL 271
G M ++ + + + + +K N+II A G + L + P ++L
Sbjct: 469 GIEAVKMSLGEPDETGRSKVMPIVDSEFIIKTNHIIPAIGQQV----ELGFVNPRDGLEL 524
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+ +G VN +++ T+ GVF GGD T V+++ G+ A +I Y+
Sbjct: 525 NPWGTIRVNPSSLMTTRKGVFAGGDCVTGPATLVQAMAQGEKVARNIDDYL 575
>gi|291516929|emb|CBK70545.1| dihydroorotate oxidase B, catalytic subunit [Bifidobacterium longum
subsp. longum F8]
Length = 328
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ + +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 120 FVISNVAGHCDDDYAAVVEKLADSDADMLEINVSCPN---VSAGGMSVGTDPVALANLMD 176
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ G P A
Sbjct: 177 RLRPMTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRTGKPIIA--- 233
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 234 ---NVTGGVSGPAVLPVGLAAVYRVRTALPEIPIIGLGGIDSGEKALEYLYAGANAVEVG 290
Query: 746 SA 747
+A
Sbjct: 291 AA 292
>gi|170289093|ref|YP_001739331.1| putative oxidoreductase [Thermotoga sp. RQ2]
gi|403253537|ref|ZP_10919838.1| putative oxidoreductase [Thermotoga sp. EMP]
gi|170176596|gb|ACB09648.1| glutamate synthase (NADPH), homotetrameric [Thermotoga sp. RQ2]
gi|402811071|gb|EJX25559.1| putative oxidoreductase [Thermotoga sp. EMP]
Length = 468
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 22/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV +K LGV ++ + + +++L + Y A+FIG G
Sbjct: 183 IPEFRLPKRIVEREVNYIKKLGVNFYLN-TVVGKTVKVKELLSE-YDAVFIGTGAGT--- 237
Query: 104 IPIFQGL--TEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
P F G+ T G Y++ FL RV + PI G V V+GAG+TA
Sbjct: 238 -PKFMGIPGTNLNGVYSANEFLTRVNLMKAYLF----PEYDTPIRVGKRVAVIGAGNTAM 292
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A SALR GA KV +V+R+ + A EE A EE EFL P++ +V+
Sbjct: 293 DAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYVGDANGNVE 352
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ + + + V E LK + +I A G N VL + P ++L++
Sbjct: 353 AVECVRMELKEADGSGRPRPVPIEGSNFVLKVDMVIEAIGQG--PNRVLLSEFPGLELNE 410
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
GY + + T ATSV GVF GGD + T ++++ GK AA IH Y+
Sbjct: 411 RGYIKADEDTGATSVKGVFAGGDIVTGAATVIKAMGAGKKAAQFIHSYL 459
>gi|297583972|ref|YP_003699752.1| dihydroorotate dehydrogenase family protein [Bacillus
selenitireducens MLS10]
gi|297142429|gb|ADH99186.1| dihydroorotate dehydrogenase family protein [Bacillus
selenitireducens MLS10]
Length = 311
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 114/192 (59%), Gaps = 12/192 (6%)
Query: 577 DDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E S+K +G A ALELN+SCP+ + G+ G DP + R ++ V+ + IP
Sbjct: 106 EDYVETSRKVAASGKASALELNISCPN---VKIGGMQFGSDPAVARELTRAVKEVIDIPL 162
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+T+I +AKA G ADG+S INT+ G+ G P A GG+S
Sbjct: 163 YVKLSPNVTDIVAMAKAVEAGGADGLSMINTLVGMTIDVQTGQPVLA------NKRGGLS 216
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ + +++ + PI+G+GG+ + D ++F+ AGA AV + +A Q+ +
Sbjct: 217 GPAIKPVAIRMIYDVSQEV-SIPIIGMGGVQTVDDIIEFMMAGASAVAVGTA-NFQNPMI 274
Query: 756 VDDYITGLQTLL 767
+ I GL+T L
Sbjct: 275 CPELIDGLETRL 286
>gi|239618192|ref|YP_002941514.1| glutamate synthase (NADPH), homotetrameric [Kosmotoga olearia TBF
19.5.1]
gi|239507023|gb|ACR80510.1| glutamate synthase (NADPH), homotetrameric [Kosmotoga olearia TBF
19.5.1]
Length = 466
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 22/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP D V EVE V+ LGVK + R I E+LR + Y AIFIGIG
Sbjct: 183 IPEFRLPKDIVQKEVEYVQSLGVKF-VYNQIIGRTIPFEELRNE-YDAIFIGIGAGA--- 237
Query: 104 IPIFQGL--TEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDTAF 160
P F G+ + Y++ FL RV + P+ + V V+GAG+ +
Sbjct: 238 -PRFMGIPGSNLNNIYSASEFLTRVNLMRANRF----PEYDTPVKISDRVAVIGAGNVSM 292
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A +A R GA +V +++R+ + A EE A EE+ +F PV+ +V+
Sbjct: 293 DAARTAKRLGAKEVTIIYRRSEAEMPARLEEYHHALEEEIKFFWLTQPVEYIGDINNNVR 352
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ +++ + + E +++ + +I A G N VL+ P +KL++
Sbjct: 353 KMRCVRMELGSPDESGRRRPIPIEGSEFEIEIDLVIEAIGQKA--NAVLKTGFPGLKLNR 410
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+GY + + T T++ GVF GGD + T +E++ GK AA I +Y+
Sbjct: 411 WGYIDADPETGQTNLEGVFAGGDIVTGAATVIEAMGAGKKAAKAIGEYL 459
>gi|46191197|ref|ZP_00206704.1| COG0167: Dihydroorotate dehydrogenase [Bifidobacterium longum
DJO10A]
gi|227547174|ref|ZP_03977223.1| dihydroorotate oxidase [Bifidobacterium longum subsp. longum ATCC
55813]
gi|227212294|gb|EEI80190.1| dihydroorotate oxidase [Bifidobacterium longum subsp. infantis ATCC
55813]
Length = 328
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ + +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 120 FVISNVAGHCDDDYAAVVEKLADSDADMLEINVSCPN---VSAGGMSVGTDPVALANLMD 176
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ G P A
Sbjct: 177 RLRPMTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRTGKPIIA--- 233
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 234 ---NVTGGVSGPAVLPVGLAAVYRVRTALPEIPIIGLGGIDSGEKALEYLYAGANAVEVG 290
Query: 746 SA 747
+A
Sbjct: 291 AA 292
>gi|456012719|gb|EMF46407.1| Dihydroorotate dehydrogenase, catalytic subunit [Planococcus
halocryophilus Or1]
Length = 304
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKK-TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ T +D++E++KK ++ ALE+N+SCP+ + G+ G DP++ R ++
Sbjct: 96 IIANVAGT-TTEDYVEVAKKISQSPNVHALEINISCPN---VKQGGITFGTDPDVARELT 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V+ +P ++KL+PN+TNI IAKA EG ADG++ INT+ G+ + G P A
Sbjct: 152 RAVKEVSAVPVYIKLSPNVTNIVSIAKAVEEGGADGITMINTLLGMRMDTKTGRPIIA-- 209
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG A +P+ L+ V +++ PI+G+GG+ + D + F+ AGA AV +
Sbjct: 210 ----NITGGLSGPAIKPVALRMVYEVSQ-HTKLPIIGMGGVTNVDDVIDFLSAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|373487131|ref|ZP_09577800.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Holophaga foetida DSM 6591]
gi|372010013|gb|EHP10626.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Holophaga foetida DSM 6591]
Length = 1179
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 27/289 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ EV+ + G+++ E L +D T++ L+ +G+ AI++ +G A
Sbjct: 234 IPEYRLPQAVLDKEVKQLLSGGIQVRTEVKLG-QDFTLDSLKAEGFDAIYLALGSWVAKG 292
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ GL E LP + G K+ P LKG V ++G G+TA D A
Sbjct: 293 M----GLENE----NHPNILPGIV------FLEGVKRNGPPELKGNVAIVGGGNTAIDAA 338
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
+ALRCGA+KV V++R+ T + A EV+ A EE EF +P +V + +K+ G++
Sbjct: 339 RTALRCGADKVTVLYRRTRTEMPADDIEVEDAIEEGVEFAYLTAPNKVVTEGDKLLGLEC 398
Query: 224 NRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGS----TLLDNDVLEAIKPVKLDKY 274
E E + +++K KA++++SA G + L N L IK K +
Sbjct: 399 YLMELGEPDASGRRKPEKVKGSEFLFKADWVVSAIGQDQDLSGLKNQTLGEIKTTKWNSI 458
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
E + T+ TSV GVF GGD + ++++ G AA I K+ +
Sbjct: 459 ---EADPETLLTSVEGVFAGGDAMSGPAAAIDAIAAGGRAAKIIEKWFK 504
>gi|48477247|ref|YP_022953.1| dihydroorotate dehydrogenase 1B [Picrophilus torridus DSM 9790]
gi|48429895|gb|AAT42760.1| dihydroorotate dehydrogenase [Picrophilus torridus DSM 9790]
Length = 297
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 13/202 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SI T +D+ L+K+ E GA A+ELNLSCPH +G GL G D +V +I
Sbjct: 92 VIGSIFGT-GPEDFSYLAKRMEDYGAIAVELNLSCPH---VKGFGLEVGSDSGLVESIVS 147
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+S V IP F KL+PN +I + A+AA KAD + INT L ++ D N V +
Sbjct: 148 EVKSKVNIPVFAKLSPNTHDILEEARAAE--KADALVLINT---LKAMKIDINARMPVLS 202
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
YGG+SG + +P+G++ V +++ P++G+GGI++ + A+++I AGA AV+I
Sbjct: 203 ---NIYGGLSGRSIKPVGIRYVYEVSREL-KIPVIGVGGIENYEDAIEYIMAGASAVEIG 258
Query: 746 SAVQNQDFTVVDDYITGLQTLL 767
+ + + + G+ +
Sbjct: 259 TGIYRHGKKIFSEITNGILNFM 280
>gi|23465365|ref|NP_695968.1| dihydroorotate dehydrogenase [Bifidobacterium longum NCC2705]
gi|189439392|ref|YP_001954473.1| dihydroorotate dehydrogenase [Bifidobacterium longum DJO10A]
gi|239622113|ref|ZP_04665144.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132796|ref|YP_004000135.1| pyrd1 [Bifidobacterium longum subsp. longum BBMN68]
gi|317483153|ref|ZP_07942150.1| dihydroorotate dehydrogenase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689131|ref|YP_004208865.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp.
infantis 157F]
gi|322691014|ref|YP_004220584.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp. longum
JCM 1217]
gi|384201593|ref|YP_005587340.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp. longum
KACC 91563]
gi|419848382|ref|ZP_14371482.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 1-6B]
gi|419849169|ref|ZP_14372230.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 35B]
gi|419852709|ref|ZP_14375566.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 2-2B]
gi|419855153|ref|ZP_14377917.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 44B]
gi|23326009|gb|AAN24604.1| dihydroorotate dehydrogenase [Bifidobacterium longum NCC2705]
gi|189427827|gb|ACD97975.1| Dihydroorotate dehydrogenase [Bifidobacterium longum DJO10A]
gi|239515304|gb|EEQ55171.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|311773760|gb|ADQ03248.1| PyrD1 [Bifidobacterium longum subsp. longum BBMN68]
gi|316915407|gb|EFV36832.1| dihydroorotate dehydrogenase [Bifidobacterium sp. 12_1_47BFAA]
gi|320455870|dbj|BAJ66492.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320460467|dbj|BAJ71087.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp.
infantis 157F]
gi|338754600|gb|AEI97589.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp. longum
KACC 91563]
gi|386407741|gb|EIJ22701.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 1-6B]
gi|386409842|gb|EIJ24669.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 2-2B]
gi|386412691|gb|EIJ27346.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 35B]
gi|386416037|gb|EIJ30552.1| putative dihydroorotate oxidase, catalytic subunit [Bifidobacterium
longum subsp. longum 44B]
Length = 323
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ + +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 115 FVISNVAGHCDDDYAAVVEKLADSDADMLEINVSCPN---VSAGGMSVGTDPVALANLMD 171
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ G P A
Sbjct: 172 RLRPMTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRTGKPIIA--- 228
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GGVSG A P+GL AV + P PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 229 ---NVTGGVSGPAVLPVGLAAVYRVRTALPEIPIIGLGGIDSGEKALEYLYAGANAVEVG 285
Query: 746 SA 747
+A
Sbjct: 286 AA 287
>gi|325911919|ref|ZP_08174322.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 143-D]
gi|325476221|gb|EGC79384.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 143-D]
Length = 306
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 19/206 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
LIAS+ + D++ +SKK +G +ALE+N+SCP+ + GM L G DP +V ++
Sbjct: 99 LIASVGGS-QISDYITISKKLSDSGLLNALEINVSCPN-VAAGGMHL--GTDPVVVEKLT 154
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
++ V IP ++KLTPN+TNI +IA+AA G ADG+S INT L+ L D +
Sbjct: 155 SEIKKVVNIPIYIKLTPNVTNIVEIAQAAERGGADGLSMINT---LLGLGID------IK 205
Query: 685 TKKLTT---YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
T K T +GG SG+A +P+ ++ V+ + + PI+G+GGI++A ++F+ AGA A
Sbjct: 206 THKATLGNGFGGWSGSAIKPVAVRMVAQVHQAV-KLPIIGMGGIETAADIVEFMLAGASA 264
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
V + +A +D + + L+TLL
Sbjct: 265 VAVGTA-HFKDGLAIPHLVADLETLL 289
>gi|410658869|ref|YP_006911240.1| Glutamate synthase [NADPH] small chain [Dehalobacter sp. DCA]
gi|410661855|ref|YP_006914226.1| Glutamate synthase [NADPH] small chain [Dehalobacter sp. CF]
gi|409021224|gb|AFV03255.1| Glutamate synthase [NADPH] small chain [Dehalobacter sp. DCA]
gi|409024211|gb|AFV06241.1| Glutamate synthase [NADPH] small chain [Dehalobacter sp. CF]
Length = 462
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E+ +KD+GV+I + + + ++++L GY A FIG G
Sbjct: 182 IPEFRLPKAIVQKEINSLKDMGVEILVNQVVG-KVTSVQELLASGYDAAFIGTGAG---- 236
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F + E G Y++ FL R + PI G V VLG G+ A
Sbjct: 237 LPYFMNIPGENFNGVYSANEFLTRSNLMKAYDF----PNHATPIKVGEQVAVLGGGNVAM 292
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN---- 216
D A +ALR GA +V +V+R+ + A EEV A EE +F +PV ++ +N
Sbjct: 293 DAARTALRLGAKEVYIVYRRSMVELPARLEEVHHAEEEGIQFKILTNPVTINGDENGNVK 352
Query: 217 KIAGMQFNRTEQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
+ +++ E + G V E +L ++ + G + V + ++L+K+
Sbjct: 353 SMTCLKYELGEPDASGRRRPVPIEGSEFELPVQTVVVSIGQG-PNPLVTTTTEGLELNKW 411
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
G + TTMATS+PGV+ GGD + T + ++ GKTAA I Y++ K
Sbjct: 412 GNIVADETTMATSIPGVYAGGDIVTGAATVILAMGAGKTAAASIDTYLKTK 462
>gi|259501327|ref|ZP_05744229.1| dihydroorotate oxidase [Lactobacillus iners DSM 13335]
gi|302190949|ref|ZP_07267203.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners AB-1]
gi|309806011|ref|ZP_07700037.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 03V1-b]
gi|312873761|ref|ZP_07733806.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2052A-d]
gi|259167297|gb|EEW51792.1| dihydroorotate oxidase [Lactobacillus iners DSM 13335]
gi|308167614|gb|EFO69767.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 03V1-b]
gi|311090759|gb|EFQ49158.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2052A-d]
Length = 306
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 125/206 (60%), Gaps = 19/206 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
LIAS+ + D++ ++KK +G +ALE+N+SCP+ + GM L G DP +V ++
Sbjct: 99 LIASVGGS-QISDYITIAKKLSDSGLLNALEINVSCPN-VAAGGMHL--GTDPVVVEKLT 154
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
++ V IP ++KLTPN+TNI +IA+AA G ADG+S INT L+ L D +
Sbjct: 155 SEIKKVVNIPVYIKLTPNVTNIVEIAQAAERGGADGLSMINT---LLGLGID------IK 205
Query: 685 TKKLTT---YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
T K T +GG SG+A +P+ ++ V+ + + PI+G+GGI++A+ ++F+ AGA A
Sbjct: 206 THKATLGNGFGGWSGSAIKPVAVRMVAQVHQAV-KLPIIGMGGIETAEDIVEFMLAGASA 264
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
V + +A +D + + L+TLL
Sbjct: 265 VAVGTA-HFKDGLAIPHLVADLETLL 289
>gi|443632777|ref|ZP_21116956.1| dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|443347600|gb|ELS61658.1| dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 311
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E++K KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 EDYVEVAKHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIASAIEEAGADGLTMINTLIGMRLDLKSGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|213692321|ref|YP_002322907.1| dihydroorotate dehydrogenase family protein [Bifidobacterium longum
subsp. infantis ATCC 15697 = JCM 1222]
gi|384199502|ref|YP_005585245.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213523782|gb|ACJ52529.1| dihydroorotate dehydrogenase family protein [Bifidobacterium longum
subsp. infantis ATCC 15697 = JCM 1222]
gi|320458454|dbj|BAJ69075.1| dihydroorotate dehydrogenase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 323
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+ S + + DD+ + +K + AD LE+N+SCP+ G++ G DP + N+
Sbjct: 115 FVISNVAGHCDDDYAAVVEKLADSDADMLEINVSCPN---VSAGGMSVGTDPVALANLMD 171
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
+R P VKLTPN+T+IT A+AA E AD +S INT+ G+ G P A
Sbjct: 172 RLRPMTDKPMIVKLTPNVTDITVPARAAVEHGADALSMINTLKGMRINIRTGQPIIA--- 228
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A P+GL AV + P PI+G+GGIDS + AL+++ AGA+AV++
Sbjct: 229 ---NVTGGISGPAVLPVGLAAVYRVRTALPEIPIIGLGGIDSGEKALEYLYAGANAVEVG 285
Query: 746 SA 747
+A
Sbjct: 286 AA 287
>gi|418036327|ref|ZP_12674754.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354688119|gb|EHE88166.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 307
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 111/174 (63%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++ +V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKMAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+I +IAKAA G ADG+S INTV G M + P +G GG
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINTVLG-MRIDVK-TRKPLLGHN----MGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 218 LSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 270
>gi|325913770|ref|ZP_08176131.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 60-B]
gi|325476970|gb|EGC80121.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 60-B]
Length = 306
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 19/206 (9%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
LIAS+ + D++ +SKK +G +ALE+N+SCP+ + GM L G DP +V ++
Sbjct: 99 LIASVGGS-QISDYITISKKLSDSGLLNALEINVSCPN-VAAGGMHL--GTDPVVVEKLT 154
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
++ V IP ++KLTPN+TNI +IA+AA G ADG+S INT L+ L D +
Sbjct: 155 SEIKKVVNIPVYIKLTPNVTNIVEIAQAAERGGADGLSMINT---LLGLGID------IK 205
Query: 685 TKKLTT---YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHA 741
T K T +GG SG+A +P+ ++ V+ + + PI+G+GGI++A ++F+ AGA A
Sbjct: 206 THKATLGNGFGGWSGSAIKPVAVRMVAQVHQAV-KLPIIGMGGIETAADIVEFMLAGASA 264
Query: 742 VQICSAVQNQDFTVVDDYITGLQTLL 767
V + +A +D + + L+TLL
Sbjct: 265 VAVGTA-HFKDGLAIPHLVADLETLL 289
>gi|312143729|ref|YP_003995175.1| glutamate synthase (NADPH), homotetrameric [Halanaerobium
hydrogeniformans]
gi|311904380|gb|ADQ14821.1| glutamate synthase (NADPH), homotetrameric [Halanaerobium
hydrogeniformans]
Length = 471
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 25/295 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++R+P + V+ EVE +KDLGV+I L + ITI++L +GY A+FIG+G
Sbjct: 190 IPEFRMPKEIVDKEVEAIKDLGVEIRL-NVLVGKTITIDELFAEGYEAVFIGVGAG---- 244
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCK--KESLPILKGT-VIVLGAGDT 158
+P F G+ E G Y++ FL RV L K + P+ G V V+G G+
Sbjct: 245 LPRFLGIPGENLNGVYSANEFLTRV------NLMKAFKYPEYKTPVKVGNKVAVVGGGNV 298
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A D A +A R G+ V +V+R+ + A EE++ A EE F +PV++ ++
Sbjct: 299 AMDAARTAKRLGSENVYIVYRRAAEQMPARSEEIEHAREEGIIFKLLNNPVEIHGDQGRV 358
Query: 219 AGMQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLD 272
M+ + E EK + V E KL + +I A G+ N +L + K ++
Sbjct: 359 DQMECIQMELGEKDDSGRRRPVPIEGSNWKLDVDTVIIAIGTN--PNPLLTKNTKDLETK 416
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
+G +VN TS GV+ GGD + T ++++ GKTAA I +Y+ K++
Sbjct: 417 SWGGIKVN-DNQQTSREGVYAGGDVVTGAATVIQAMGAGKTAAKSIKEYLLNKSD 470
>gi|415886508|ref|ZP_11548288.1| dihydroorotate dehydrogenase 1B [Bacillus methanolicus MGA3]
gi|387587195|gb|EIJ79518.1| dihydroorotate dehydrogenase 1B [Bacillus methanolicus MGA3]
Length = 313
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 110/174 (63%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
+++D++ ++K+ KA ALELN+SCP+ + G+A G PE+ +N++ V+ ++
Sbjct: 104 SEEDYVAVAKEISKAPNVYALELNISCPN---VKTGGIAFGTIPEVAKNLTKQVKEVSEV 160
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKL+PN+TNI +IAKA +G ADG++ INT+ G+ G P A GT GG
Sbjct: 161 PVYVKLSPNVTNIVEIAKAVEDGGADGLTMINTLLGMRIDVKSGKPILANGT------GG 214
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ + +++ + PI+G+GGI A+ ++F AGA AV + +A
Sbjct: 215 LSGPAIKPVAIRMIFEVSQHV-SLPIIGMGGIQCAEDVIEFFYAGASAVAVGTA 267
>gi|420156903|ref|ZP_14663743.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. MSTE9]
gi|394756913|gb|EJF39972.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. MSTE9]
Length = 463
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 155/294 (52%), Gaps = 26/294 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IPQ+RLP + V E++L+K GV IE + + + +++++L + G+ A+FIG G
Sbjct: 183 IPQFRLPKEIVQKEIDLLKSNGVTIETDMVIG-KVLSVDELFEMGFEAVFIGSGAG---- 237
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRV--ATSSKKGLCGGCKKESLPILK-GTVIVLGAGDT 158
+P F + E +G Y++ FL R+ + K+G PI++ V V G G+
Sbjct: 238 LPSFMNIPGEGLVGVYSANEFLTRINLMKAYKEGY-------DTPIIRPKNVAVCGGGNV 290
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-K 217
A D A SA R GA V +V+R+ + A EE+ A EE+ +F +PV + +N +
Sbjct: 291 AMDAARSAKRLGAENVYIVYRRAEEQMPARREEIHHAKEEEIDFRLLTNPVAIHGDENGR 350
Query: 218 IAGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLE-AIKPVKL 271
+ ++ R E E + + VE E +L + ++ A G++ N +L+ + ++
Sbjct: 351 VTEIECIRMELGEPDASGRRKPVEVEGSNFRLSVDCVVMAIGNS--PNPLLQRTTEGLET 408
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+++G VN T+ T+ GVF GGD + T + ++ +GK AA I +YI+ K
Sbjct: 409 NRHGCLIVNEETLQTTREGVFAGGDAVTGAATVILAMGEGKHAANSIDEYIKSK 462
>gi|387912859|sp|Q9V0Y6.2|PYRDB_PYRAB RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|380741404|tpe|CCE70038.1| TPA: dihydroorotate dehydrogenase 1B [Pyrococcus abyssi GE5]
Length = 299
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 14/190 (7%)
Query: 581 ELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK 638
E + EK G ADA ELNLSCPH +G G+ GQ PE V + V+ P K
Sbjct: 103 EFAFLAEKLGEVADAFELNLSCPHA---KGYGMEIGQKPENVYEVVKAVKDVTDKPVIAK 159
Query: 639 LTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGGVSGN 697
LTPN+++I ++ AA + ADGVSAINTV + + + A P + K +GG SG
Sbjct: 160 LTPNVSDIRELGLAAEKAGADGVSAINTVKAIAIDIYAK---RPILSNK----FGGYSGP 212
Query: 698 ATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVD 757
+P+ L+AV +A + P++GIGGI + A++F+ AGA A+QI +AV + F+V
Sbjct: 213 GVKPIALRAVYDLASSL-DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVYLRGFSVFR 271
Query: 758 DYITGLQTLL 767
+ G+ L
Sbjct: 272 EIAEGISRYL 281
>gi|116514881|ref|YP_813787.1| dihydroorotate dehydrogenase 1B [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274387|sp|Q047M3.1|PYRDA_LACDB RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|116094196|gb|ABJ59349.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
Length = 307
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 111/174 (63%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++ +V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKMAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+I +IAKAA G ADG+S INTV G M + P +G GG
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINTVLG-MRIDVK-TRKPLLGHN----MGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 218 LSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 270
>gi|104774746|ref|YP_619726.1| dihydroorotate dehydrogenase 1B [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|385816548|ref|YP_005852939.1| Dihydroorotate dehydrogenase B, catalytic unit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
gi|122983869|sp|Q1G864.1|PYRDA_LACDA RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|103423827|emb|CAI98852.1| Dihydroorotate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|325126585|gb|ADY85915.1| Dihydroorotate dehydrogenase B, catalytic unit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 307
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 111/174 (63%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++ +V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKMAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+I +IAKAA G ADG+S INTV G M + P +G GG
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINTVLG-MRIDVK-TRKPLLGHN----MGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 218 LSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 270
>gi|323489519|ref|ZP_08094746.1| dihydroorotate dehydrogenase 1B [Planococcus donghaensis MPA1U2]
gi|323396650|gb|EGA89469.1| dihydroorotate dehydrogenase 1B [Planococcus donghaensis MPA1U2]
Length = 304
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 109/183 (59%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKK-TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ T +D++E++KK ++ ALE+N+SCP+ + G+ G DP + R ++
Sbjct: 96 IIANVAGT-TTEDYVEVAKKISQSPNVQALEINISCPN---VKQGGITFGTDPNVARELT 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V+ +P ++KL+PN+TNI IAKA EG ADG++ INT+ G+ + G P A
Sbjct: 152 RAVKEVSAVPVYIKLSPNVTNIVSIAKAVEEGGADGITMINTLLGMRMDTKTGRPIIA-- 209
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG A +P+ L+ V +++ PI+G+GG+ + D + F+ AGA AV +
Sbjct: 210 ----NITGGLSGPAIKPVALRMVYEVSQ-HTKLPIIGMGGVTNVDDVIDFLSAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|90422525|ref|YP_530895.1| putative trifunctional 2-polyprenylphenol hydroxylase/glutamate
synthase subunit beta/ferritin domain-containing protein
[Rhodopseudomonas palustris BisB18]
gi|90104539|gb|ABD86576.1| glutamate synthase (NADPH), homotetrameric [Rhodopseudomonas
palustris BisB18]
Length = 994
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 33/296 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKD-GYTAIFIGIGKPNAN 102
IP +RLP + ++ E++ +KD+GVK E + + + TI++L D GY A+F+ G
Sbjct: 475 IPSFRLPRNIIDREIQRLKDIGVKFETNKVVG-KTFTIDQLMNDRGYDAMFVAAGAGA-- 531
Query: 103 VIPIFQGLTEEMG--FYTSKTFLPRVATSSKKGLCGGCKKESL--PILKG-TVIVLGAGD 157
P F G+ E Y++ FL R+ L GG K L P+ G +VIV+GAG+
Sbjct: 532 --PTFLGIPGEFAGRVYSANEFLTRI------NLMGGDKFPYLDTPVSVGQSVIVIGAGN 583
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TA DC A R GA V V+R+ A EE++ A EE +F SPV++ V +
Sbjct: 584 TAMDCLRVARRIGAATVRCVYRRSEAEAPARIEEIRHAKEEGVDFFFLHSPVEILVTEAG 643
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQR---------IKLKANYIISAFGSTLLDNDVLEAIKP 268
+ ++ R ++ E GE DE R I+L+ + +I A G+ N ++ P
Sbjct: 644 V--VRAVRLQKMELGE--PDERGRRKPIALDEFIELECDTVIYALGTK--PNPIIGQATP 697
Query: 269 -VKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
+ L+K+G T +T++PGVF GGD T + +++ G+ AA I +++
Sbjct: 698 GLALNKWGNIAAADDTQSTNMPGVFAGGDIVTGGATVILAMSAGRRAAKSIAAWLR 753
>gi|30173323|sp|Q8PW56.1|PYRDB_METMA RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|20906259|gb|AAM31441.1| Dihydroorotate dehydrogenase [Methanosarcina mazei Go1]
Length = 314
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 11/186 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI ++ E+++ A DA ELN+SCPH G G A G +P +V ++
Sbjct: 106 VIASIFGG-TPSEFAEVAEGLLPAKPDAFELNVSCPH---AEGYGAAIGSNPCLVEAVTA 161
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ V +P +VKLTPN+ +IT I AA G AD V AINTV G+ G +P +G
Sbjct: 162 AVKDVVNVPVWVKLTPNVADITCIGNAAESGGADAVVAINTVKGMAIDIESG--YPVLGN 219
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG A +P+ +K V + P++G+GG+ S + A++ I AGA AVQ+
Sbjct: 220 RS----GGLSGKAVKPVAVKCVYDLFTAL-EIPVIGVGGVSSWEDAVEMIMAGAAAVQVG 274
Query: 746 SAVQNQ 751
SAV ++
Sbjct: 275 SAVYDR 280
>gi|15644388|ref|NP_229440.1| oxidoreductase [Thermotoga maritima MSB8]
gi|418045700|ref|ZP_12683795.1| glutamate synthase (NADPH), homotetrameric [Thermotoga maritima
MSB8]
gi|4982213|gb|AAD36707.1|AE001806_17 glutamate synthase, beta subunit [Thermotoga maritima MSB8]
gi|351676585|gb|EHA59738.1| glutamate synthase (NADPH), homotetrameric [Thermotoga maritima
MSB8]
Length = 468
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 22/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV ++ LGV ++ + + +++L + Y A+FIG G
Sbjct: 183 IPEFRLPKRIVEREVSYIRKLGVNFHLN-TVVGKTVKVKELLSE-YDAVFIGTGAGT--- 237
Query: 104 IPIFQGL--TEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAF 160
P F G+ T G Y++ FL RV + PI G V V+GAG+TA
Sbjct: 238 -PKFMGIPGTNLNGVYSANEFLTRVNLMKAYLF----PEYDTPIRVGKKVAVIGAGNTAM 292
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIA 219
D A SALR GA KV +V+R+ + A EE A EE EFL P++ + + +
Sbjct: 293 DAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYIGDANGNVE 352
Query: 220 GMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
M+ R E E + V E L+ + +I A G N VL + P ++L++
Sbjct: 353 AMECVRMELKEADGSGRPRPVPIEGSNFVLEVDMVIEAIGQG--PNRVLLSEFPGLELNE 410
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
GY + + T ATSV GVF GGD + T ++++ GK AA IH Y+
Sbjct: 411 RGYIKADEDTGATSVKGVFAGGDIVTGAATVIKAMGAGKKAAQFIHSYL 459
>gi|341582822|ref|YP_004763314.1| putative oxidoreductase [Thermococcus sp. 4557]
gi|340810480|gb|AEK73637.1| putative oxidoreductase [Thermococcus sp. 4557]
Length = 478
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 159/289 (55%), Gaps = 19/289 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP D + E+E ++ LGV+++ + + +T+E+L ++ Y A+FIG G +
Sbjct: 198 IPEFRLPKDILKTELEKLEKLGVEVKT-NYIVGKTVTVEELLQE-YDAVFIGTGAGTPKL 255
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ I L + + Y++ FL RV + PI G VIV+GAG+TA D
Sbjct: 256 LNIPGILLDRI--YSANEFLTRVNLMKAYLF----PEYDTPIAVGKKVIVIGAGNTAMDA 309
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V + +R+G ++ A EE+ A EE +F F++PV+ + ++ K+ +
Sbjct: 310 ARSALRLGA-EVTIAYRRGREDMTARLEEIGHAEEEGVKFEFFLNPVEFIGDENGKVRAV 368
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
+F + E++++G+ + + + L+A+ +I A G L N +L K + G
Sbjct: 369 KFEKMRPLEERDKRGKRKIVGTGEYVTLEADTVIIAIG--LEPNKILLEESGFKANPDGT 426
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
V+ M TS+PGVF GGD T + ++ DGK AA I +YI++K
Sbjct: 427 LIVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAKAIDEYIKDK 474
>gi|14520860|ref|NP_126335.1| dihydroorotate dehydrogenase 1B [Pyrococcus abyssi GE5]
gi|5458077|emb|CAB49566.1| pyrD dihydroorotase dehydrogenase [Pyrococcus abyssi GE5]
Length = 303
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 14/190 (7%)
Query: 581 ELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK 638
E + EK G ADA ELNLSCPH +G G+ GQ PE V + V+ P K
Sbjct: 107 EFAFLAEKLGEVADAFELNLSCPHA---KGYGMEIGQKPENVYEVVKAVKDVTDKPVIAK 163
Query: 639 LTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGGVSGN 697
LTPN+++I ++ AA + ADGVSAINTV + + + A P + K +GG SG
Sbjct: 164 LTPNVSDIRELGLAAEKAGADGVSAINTVKAIAIDIYAK---RPILSNK----FGGYSGP 216
Query: 698 ATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVD 757
+P+ L+AV +A + P++GIGGI + A++F+ AGA A+QI +AV + F+V
Sbjct: 217 GVKPIALRAVYDLASSL-DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVYLRGFSVFR 275
Query: 758 DYITGLQTLL 767
+ G+ L
Sbjct: 276 EIAEGISRYL 285
>gi|417350127|ref|ZP_12128593.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353570896|gb|EHC35019.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
Length = 292
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 8/189 (4%)
Query: 583 SKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642
++ E+AGAD +E N SCP M MG GQ PE+V V+ +P K+TPN
Sbjct: 1 ARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPN 59
Query: 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVGTKKLTTYGGVSGNATRP 701
I ++ ++A AA G ADG++ INTV + ++ + P V K ++ G SG A +P
Sbjct: 60 IGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGK--SSISGYSGKAVKP 117
Query: 702 MGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDD 758
+ L+ + + +M P +FPI GIGGI++ + A +F+ GA +Q+ + + + +V+D
Sbjct: 118 IALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVED 176
Query: 759 YITGLQTLL 767
+GL L
Sbjct: 177 MASGLSHYL 185
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 192 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 251
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 252 PHCNTEKCVGCLLC 265
>gi|418030093|ref|ZP_12668608.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|354688146|gb|EHE88191.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 290
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPH-GMGERGMGLACGQDPEMVRNISLWVRSSVK 632
++DD++E++KK +G +ALE+N+SCP+ G G+ G E+ + I + +V
Sbjct: 90 SEDDYVEVAKKLSASGLVNALEINVSCPNVAQGGMSFGVYAGVVEELTKKIKM----AVA 145
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKLTPN+T+I +IAKAA G ADG+S INTV G M + P +G G
Sbjct: 146 LPIYVKLTPNVTDIVEIAKAAESGGADGISMINTVLG-MRIDVK-TRKPLLGHN----MG 199
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 200 GLSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 253
>gi|158321476|ref|YP_001513983.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
oremlandii OhILAs]
gi|158141675|gb|ABW19987.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
oremlandii OhILAs]
Length = 372
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 16/217 (7%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+++IA+I+ + + +++K E+ GADA+EL +SCPHG G G+ +P +
Sbjct: 91 AVVIANIL-GHTSSEIAYIAQKVEQFGADAVELGVSCPHGEGLEGVI----SEPSKLYEF 145
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
+ V +KIP VKL+ N N+ +A+AA + A +S I+TV + + +
Sbjct: 146 TKAVVDRIKIPVMVKLSSNTVNVVKLARAAEKAGASAISGIDTVRSIAGVDIEK------ 199
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G L T+GG SG+A RP+GL A++SIA+ + PI GIGGI + + L+++ GA VQ
Sbjct: 200 GRVLLPTFGGYSGDAIRPIGLAAIASIAQA-TSIPICGIGGITNYEHILEYMMLGASTVQ 258
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL----YLKSTQLKG 776
+C+++ + + + GL + Y ++KG
Sbjct: 259 VCTSIILNGYEHISTLLDGLNGWMAQHSYRNFDEIKG 295
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
+D+SV GL NP +++ P T + SM+R+A E G G VTKT + ++ NV PR+
Sbjct: 1 MDLSVNFLGLSLKNPIIVSAGPLTGSGSMMRKAIEAGAGAVVTKTIA--NEIRPNVRPRL 58
Query: 406 VKGTTSRHLYGPEQGSFLNIELIS 429
VKG H NIEL S
Sbjct: 59 VKGREGLH----------NIELYS 72
>gi|350265867|ref|YP_004877174.1| dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|349598754|gb|AEP86542.1| dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. spizizenii TU-B-10]
Length = 311
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ ++P
Sbjct: 104 EDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSEVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIASAIEEAGADGLTMINTLIGMRLDLKSGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|321315319|ref|YP_004207606.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis BSn5]
gi|320021593|gb|ADV96579.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis BSn5]
Length = 311
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
DD++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 DDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|430755963|ref|YP_007209743.1| Dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|430020483|gb|AGA21089.1| Dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
Length = 311
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
DD++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 DDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|20089472|ref|NP_615547.1| dihydroorotate dehydrogenase 1B [Methanosarcina acetivorans C2A]
gi|30173337|sp|Q8TT55.1|PYRDB_METAC RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|19914377|gb|AAM04027.1| dihydroorotate oxidase [Methanosarcina acetivorans C2A]
Length = 311
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 12/205 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI ++ E+++ A DALELN+SCPH G G A G +P +V ++
Sbjct: 103 VIASIFGG-APSEFAEVAEGLLPAKPDALELNVSCPH---AEGYGAAVGSNPCLVEAVTA 158
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ V +P +VKLTPN+ +IT I AA G AD V AINTV G+ G +P +G
Sbjct: 159 AVKDVVNVPVWVKLTPNVADITCIGNAAESGGADAVVAINTVKGMAIDIESG--YPVLGN 216
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG A +P+ +K V + P++G+GG+ S + A++ + AGA AVQ+
Sbjct: 217 RS----GGLSGKAVKPVAVKCVYDLYTAL-EIPVIGVGGVSSWEDAVELMMAGAAAVQVG 271
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLK 770
SAV ++ + + G++ L K
Sbjct: 272 SAVYDR-VDIFSEIGAGIEAFLERK 295
>gi|161485673|ref|NP_633769.2| dihydroorotate dehydrogenase 1B [Methanosarcina mazei Go1]
Length = 301
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 11/186 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI ++ E+++ A DA ELN+SCPH G G A G +P +V ++
Sbjct: 93 VIASIFGG-TPSEFAEVAEGLLPAKPDAFELNVSCPH---AEGYGAAIGSNPCLVEAVTA 148
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ V +P +VKLTPN+ +IT I AA G AD V AINTV G+ G +P +G
Sbjct: 149 AVKDVVNVPVWVKLTPNVADITCIGNAAESGGADAVVAINTVKGMAIDIESG--YPVLGN 206
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG A +P+ +K V + P++G+GG+ S + A++ I AGA AVQ+
Sbjct: 207 RS----GGLSGKAVKPVAVKCVYDLFTAL-EIPVIGVGGVSSWEDAVEMIMAGAAAVQVG 261
Query: 746 SAVQNQ 751
SAV ++
Sbjct: 262 SAVYDR 267
>gi|291296268|ref|YP_003507666.1| dihydroorotate dehydrogenase family protein [Meiothermus ruber DSM
1279]
gi|290471227|gb|ADD28646.1| dihydroorotate dehydrogenase family protein [Meiothermus ruber DSM
1279]
Length = 461
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 19/216 (8%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I S M + W ++ K E GAD +ELN CPHGM ERGMG A GQ PE + I+
Sbjct: 101 VIVSAMVESTPEAWRDIILKIEDTGADGIELNYGCPHGMSERGMGSAVGQVPEYCQQITQ 160
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
WV KIP VKLTPN+ ++ A+AA A+ +S INT++ ++ + D T
Sbjct: 161 WVMDVAKIPVIVKLTPNVASVVPPARAALAAGANALSLINTINSIIGVDLD--------T 212
Query: 686 KKLT-------TYGGVSGNATRPMGLKAVSSIA----KMFPNFPILGIGGIDSADVALQF 734
++T +GG +G A +P+ L +SS+ PI G+GGI + A +F
Sbjct: 213 LEITPNIGGKGGHGGYAGPAVKPIALNLLSSLGVDPVVKQSGVPISGMGGISTWRDAAEF 272
Query: 735 IQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLK 770
+ GA ++Q+C+AV + + +++D I GL + K
Sbjct: 273 LLLGATSLQVCTAVMHYGYRIIEDLIDGLNAWMDAK 308
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + + + RAFE GWG AV KT V NVS R
Sbjct: 1 MADLSINFAGIKSPNPFWLASAPPTNSGAQIHRAFEYGWGGAVWKTIGAP---VLNVSNR 57
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITE----- 459
+ H G + + N+ELIS++ + + + + + + + E
Sbjct: 58 Y----GAWHYGGQKMLAINNVELISDRPLEVNLREIRDVKRHWPDRAVIVSAMVESTPEA 113
Query: 460 -----LNLKKLNSDGVSLQNGLPK 478
L ++ +DG+ L G P
Sbjct: 114 WRDIILKIEDTGADGIELNYGCPH 137
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 24/100 (24%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAI-------- 541
++ DV+G+++ R++++ + D + VA IN D CI C CY+ACND+ +Q I
Sbjct: 312 TIADVVGKSLPRISDFKDFDLSFRAVARINPDKCIRCNLCYVACNDTAHQCIDLVDAAGN 371
Query: 542 -----TFHPET---HQAHVT--------DECTGCTLCLSI 565
+ P + HQA T D+C GC LC ++
Sbjct: 372 RVEPYRYDPRSNGKHQAVSTRPQPVVREDDCVGCRLCHNV 411
>gi|409096776|ref|ZP_11216800.1| putative oxidoreductase [Thermococcus zilligii AN1]
Length = 481
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 159/292 (54%), Gaps = 20/292 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E++ + LGV+I + + + +T+E+L ++ Y A+FIG G +
Sbjct: 199 IPEFRLPKEILEKELDKLGKLGVRILTDHVVG-KTVTLEELLQE-YDAVFIGTGAGTPKL 256
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ I L + + Y++ FL RV + P+ G VIV+GAG+TA D
Sbjct: 257 LNIPGILLDRI--YSANEFLTRVNLMKAYAF----PECDTPVYVGRKVIVIGAGNTAMDA 310
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SALR GA +V + +R+G ++ A EE+Q A EE +F F++PV+ + + ++ +
Sbjct: 311 ARSALRLGA-EVTIAYRRGREDMTARIEEIQHAEEEGVKFEFFLNPVEFIGDGNGRVKAV 369
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLDKYG 275
+F + E++ KG+ + + + L+A+ +I A G L N ++ EA +K++ G
Sbjct: 370 KFEKMKPLEERDSKGKRKIAGTGEYVTLEADTVIIAIG--LEPNRIISEAATGLKVNPDG 427
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
V+ M TS+PGVF GGD T + ++ DGK AA I YI+ K
Sbjct: 428 TLVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAKAICDYIERKRK 478
>gi|291544426|emb|CBL17535.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Ruminococcus
champanellensis 18P13]
Length = 451
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 23/292 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E++ +K LGV I + + + +++++L +DGY AIFIG G
Sbjct: 173 IPEFRLPKAIVQKEIKTLKALGVNIMTDMVIG-KVLSVDELLEDGYEAIFIGSGAG---- 227
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F G+ E +G ++ +L R+ + G ++ P++K V V+G G+ A
Sbjct: 228 LPRFMGIEGEALVGVCSANEYLTRINL-----MKGYLEEYDTPVIKSKRVAVVGGGNVAM 282
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
D A SA+R GA V +V+R+ + A EEV A EE EFL +PV++ +N ++
Sbjct: 283 DAARSAMRMGAEHVYIVYRRSEEEMPARKEEVHHAKEEGIEFLNLNNPVKIIGDENGRVC 342
Query: 220 GMQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
M+ R E E E + E L+ + +I + G++ N ++ ++ +K
Sbjct: 343 AMECIRMELGEPDESGRRSPIPVEGSNYNLEVDTVIMSIGTS--PNPLIRTTTSGLEANK 400
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
G V+ M T+ GV+ GGD + T + ++ GKTAA I KYIQ K
Sbjct: 401 RGCLIVD-EAMCTTKEGVYAGGDAVTGAATVILAMGAGKTAAQSIDKYIQNK 451
>gi|89098719|ref|ZP_01171601.1| dihydroorotate dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89086681|gb|EAR65800.1| dihydroorotate dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 313
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 118/183 (64%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA+I + ++D++E++++ KA ALELN+SCP+ + G+A G PE+ ++++
Sbjct: 96 IIANIAGS-TEEDYIEVARELSKASNVKALELNISCPN---VKTGGIAFGTIPEIAKSLT 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V+++ +P +VKL+PN+TNI ++AKA EG ADG++ INT+ G+ G P A
Sbjct: 152 KKVKAASAVPVYVKLSPNVTNIVEMAKAVEEGGADGLTMINTLLGMRMDLNTGRPILANR 211
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T GG+SG + +P+ L+ + +++ + PI+G+GG+++A+ ++F AGA AV +
Sbjct: 212 T------GGLSGPSIKPVALRMIYEVSQQV-DLPIIGMGGVETAEDVIEFFYAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|340623627|ref|YP_004742080.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis X1]
gi|339903895|gb|AEK19337.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis X1]
Length = 304
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 11/188 (5%)
Query: 570 IMCTYNKDDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV 627
I Y K+D E K E G D LELN+SCPH G G G + GQDP + +N+ V
Sbjct: 98 IGSIYGKNDS-EFQKAAEIIGNYVDVLELNISCPHAGG--GYGSSIGQDPYLCKNVVSAV 154
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ IP KLTPN+T+I +IA A ADG+ AINT+ M + + + P +G +
Sbjct: 155 KDVSDIPVIAKLTPNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIE-SGVPILGNR- 212
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ +K V I + P++G+GGI + A++F+ AGA AVQ+ +
Sbjct: 213 ---VGGMSGKAVKPIAVKNVYDICSAV-DVPVIGVGGITTGADAIEFMMAGASAVQVGTG 268
Query: 748 VQNQDFTV 755
V + + +
Sbjct: 269 VYYRGYDI 276
>gi|452210326|ref|YP_007490440.1| Dihydroorotate dehydrogenase, catalytic subunit [Methanosarcina
mazei Tuc01]
gi|452100228|gb|AGF97168.1| Dihydroorotate dehydrogenase, catalytic subunit [Methanosarcina
mazei Tuc01]
Length = 314
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 11/186 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI ++ E+++ A DA ELN+SCPH G G A G +P +V ++
Sbjct: 106 VIASIFGG-TPSEFSEVAEGLLPAKPDAFELNVSCPHA---EGYGAAIGTNPCLVEAVTA 161
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ V +P +VKLTPN+ +IT I AA G AD V AINTV G+ G +P +G
Sbjct: 162 AVKDVVNVPVWVKLTPNVADITCIGNAAESGGADAVVAINTVKGMAIDIESG--YPVLGN 219
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG A +P+ +K V + P++G+GG+ S + A++ I AGA AVQ+
Sbjct: 220 RS----GGLSGKAVKPVAVKCVYDLFTAL-EIPVIGVGGVSSWEDAVEMIMAGAAAVQVG 274
Query: 746 SAVQNQ 751
SAV ++
Sbjct: 275 SAVYDR 280
>gi|375337193|ref|ZP_09778537.1| NADPH-dependent glutamate synthase, homotetrameric
[Succinivibrionaceae bacterium WG-1]
Length = 459
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 152/290 (52%), Gaps = 24/290 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLR-KDGYTAIFIGIGK--PN 100
IP++RLP + V E++L+K VK EC ++LS ++++I+ + K G+ A+F+G G P
Sbjct: 185 IPEFRLPKNIVKHEIDLLKSKNVKFECGKTLS-KELSIQDFQTKLGFDAVFLGFGAGIPT 243
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ IP G+ + G Y + FL +V T G +K T+ V+G G+ A
Sbjct: 244 SMDIP---GI-DLKGVYQANDFLVKVNTLQDNNPLG--RKYD------TIAVVGGGNVAM 291
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV--DVKDNKI 218
D SA+R GA KVL+V+R+ + + A E++ A +E EF SP+++ D N I
Sbjct: 292 DACRSAVRTGAKKVLIVYRRSESEMPAHVGEIKEARDEGVEFAFLTSPIEIKGDANGNVI 351
Query: 219 A--GMQFNRTEQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
A ++ E + +G V ++ + +I A G+T D +L+ + ++ D
Sbjct: 352 ALECLRNKLGEDDSRGRRKPVAIPNSNYQIPVDCVIMAVGTT-ADEKLLKE-QGLEYDAK 409
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
G +VN T+ TS+ GVF GGD T + ++ G+ AA IH Y+ +
Sbjct: 410 GRLKVNPETLETSIKGVFAGGDNVTGPKTVISAMGAGRIAATAIHNYLSK 459
>gi|389815958|ref|ZP_10207195.1| dihydroorotate dehydrogenase 1B [Planococcus antarcticus DSM 14505]
gi|388465452|gb|EIM07769.1| dihydroorotate dehydrogenase 1B [Planococcus antarcticus DSM 14505]
Length = 304
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 109/183 (59%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ T +D++E++K +A ALE+N+SCP+ + G+ G DP++ R ++
Sbjct: 96 IIANVAGT-TMEDYVEVAKAISQAPNVRALEINISCPN---VKQGGITFGTDPDVARELT 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V+ +P ++KL+PN+TNI IAKA EG ADG++ INT+ G+ + G P A
Sbjct: 152 RAVKEVSSVPVYIKLSPNVTNIVSIAKAVEEGGADGITMINTLLGMRMDTKTGRPIIA-- 209
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG A +P+ L+ V +++ PI+G+GG+ + D + F+ AGA AV +
Sbjct: 210 ----NITGGLSGPAIKPVALRMVYEVSQ-HTKLPIIGMGGVTNVDDVIDFLSAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|73668988|ref|YP_305003.1| dihydroorotate dehydrogenase 1B [Methanosarcina barkeri str.
Fusaro]
gi|72396150|gb|AAZ70423.1| dihydroorotate oxidase B, catalytic subunit [Methanosarcina barkeri
str. Fusaro]
Length = 301
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 17/213 (7%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI + ++ E+++ A DA ELN+SCPH G G A G +P +V I+
Sbjct: 93 VIASIFGG-SPAEFKEVAEGLLPAKPDAFELNVSCPH---AEGYGAAVGSNPCLVEAITA 148
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V++ V +P +VKLTPN+++IT I AA G AD V AINT+ G M++ + +P +G
Sbjct: 149 AVKNIVSVPVWVKLTPNVSDITCIGNAAEAGGADAVVAINTLKG-MAIDIESG-YPVLGN 206
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG A +P+ +K V + P++G+GG+ S A++ + AGA AVQ+
Sbjct: 207 RS----GGLSGKAVKPVAVKCVYDLYTAL-EIPVIGVGGVSSWQDAVEMMMAGAAAVQVG 261
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWD 778
SAV ++ V + G++ L Q KG+
Sbjct: 262 SAVYDR-LDVFSEISAGIEAFL-----QRKGYS 288
>gi|45358002|ref|NP_987559.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis S2]
gi|44920759|emb|CAF29995.1| Dihydroorotate oxidase [Methanococcus maripaludis S2]
Length = 304
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 11/188 (5%)
Query: 570 IMCTYNKDDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV 627
I Y K+D E K E G D LELN+SCPH G G G + GQDP + +N+ V
Sbjct: 98 IGSIYGKNDS-EFQKAAEIIGNYVDVLELNISCPHAGG--GYGSSIGQDPYLCKNVVSAV 154
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ IP KLTPN+T+I +IA A ADG+ AINT+ M + + + P +G +
Sbjct: 155 KDVSDIPVIAKLTPNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIE-SGVPILGNR- 212
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ +K V I + P++G+GGI + A++F+ AGA AVQ+ +
Sbjct: 213 ---VGGMSGKAVKPIAVKNVYDICSAV-DVPVIGVGGITTGADAIEFMMAGASAVQVGTG 268
Query: 748 VQNQDFTV 755
V + + +
Sbjct: 269 VYYRGYDI 276
>gi|376260013|ref|YP_005146733.1| NADPH-dependent glutamate synthase [Clostridium sp. BNL1100]
gi|373944007|gb|AEY64928.1| NADPH-dependent glutamate synthase, homotetrameric [Clostridium sp.
BNL1100]
Length = 464
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 25/293 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E++ VKDLGV I+ + R +++E L+++GY A+FIG G
Sbjct: 183 IPEFRLPKALVQQEIQTVKDLGVDIQTNMVIG-RVLSVEDLKEEGYKAVFIGSGAG---- 237
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESL--PILKG-TVIVLGAGDT 158
+P F G+ E G Y++ FL R+ L G K S P+ G V V+G G+
Sbjct: 238 LPSFMGIPGENYNGVYSANEFLTRI------NLMGAYKFPSTDTPVFVGKNVAVVGGGNV 291
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNK 217
A D A SA R GA V +++R+ + A EEV A EE F +P Q+ +D
Sbjct: 292 AMDAARSAKRLGAENVYIIYRRSEAEMPARLEEVHHAKEEGIIFKVLTNPKQILGTEDGW 351
Query: 218 IAGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ GM+ E E + VE + + +I A G + N ++ + P + +
Sbjct: 352 VKGMECVEMELGEPDKSGRRRPVEKKGSEHIVDLETVIIAIGQS--PNPLISSTTPGLDI 409
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
+G V T ATS GV+ GGD + T + ++ GK AA I +YI++
Sbjct: 410 QSWGGIIVEEETGATSKSGVYAGGDAVTGAATVILAMGAGKKAAEAIDRYIRQ 462
>gi|257075749|ref|ZP_05570110.1| dihydroorotate dehydrogenase 1B [Ferroplasma acidarmanus fer1]
Length = 298
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 12/191 (6%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+++ L++K + GA A+ELNLSCPH +G G G DPE+V I V+S + IP +
Sbjct: 103 EEFAMLAEKMQAYGASAVELNLSCPH---VKGYGTEIGSDPELVSAIVSAVKSRINIPVY 159
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
KL+PN +++ A AA GKADG INT+ ++ D N AV + YGG+SG
Sbjct: 160 AKLSPNTSDMLGQAIAA--GKADGYVLINTIK---AMKIDINTGKAVLS---NIYGGLSG 211
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVV 756
+ +P+G++ V + K I+G+GGI++ + AL++I AGA AVQI SA+ +
Sbjct: 212 KSIKPVGIRYVYEVKKETGK-TIIGVGGINNFEDALEYIMAGASAVQIGSAISQAGIGIF 270
Query: 757 DDYITGLQTLL 767
+ L++ +
Sbjct: 271 ANLTKELESYM 281
>gi|428279149|ref|YP_005560884.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. natto
BEST195]
gi|291484106|dbj|BAI85181.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp. natto
BEST195]
Length = 311
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 EDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSNVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V ++++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQVV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|328957538|ref|YP_004374924.1| dihydroorotate dehydrogenase 1B [Carnobacterium sp. 17-4]
gi|328673862|gb|AEB29908.1| dihydroorotate dehydrogenase 1B [Carnobacterium sp. 17-4]
Length = 309
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 113/183 (61%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKT-EKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IAS+ T ++++E++KK + ALE+N+SCP+ + GL G PE V +I+
Sbjct: 96 VIASVAGT-TVEEYIEVTKKLCQSPTVRALEINVSCPN---VKEGGLTFGSKPESVYDIT 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V++ +P ++KLTPN+TNI +IA+AA +G ADG+S INT+ G MS+ + P +
Sbjct: 152 RAVKTVSTVPIYIKLTPNVTNIVEIAQAAEKGGADGISMINTLLG-MSIDVE-TKRPILA 209
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K GG+SG A +P+ ++ V +++ + PI+G+GGI + D L+ AGA AV I
Sbjct: 210 NKT----GGLSGPAVKPIAIRMVYQVSRAV-SIPIIGMGGISTVDDVLEMFMAGASAVAI 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|296331130|ref|ZP_06873604.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674285|ref|YP_003865957.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151774|gb|EFG92649.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412529|gb|ADM37648.1| dihydroorotate dehydrogenase 1B [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 311
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 EDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIASAIEEAGADGLTMINTLIGMRLDLKSGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|410031531|ref|ZP_11281361.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Marinilabilia sp. AK2]
Length = 601
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 139/292 (47%), Gaps = 26/292 (8%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
S+IP +RLP + +N EV + D+G+ + T +++++ Y A+F+G G P
Sbjct: 149 SQIPSFRLPEEVLNEEVNYILDMGIHTQ----FLTYVNSLKEVLSQKYDAVFVGTGAPKG 204
Query: 102 NVIPIFQGLTEEMGF-YTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+P G E F + +L VA K + V+VLG G+TA
Sbjct: 205 RDLPKLPGRKEGDKFIHIGIEWLANVAFEHTKSI------------GEKVLVLGGGNTAM 252
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DC ++ R G +V VV R ++A P E + A E + L P+ +VKD K+ G
Sbjct: 253 DCCRTSRRLGGKEVKVVVRSPFEEMKASPWEKEDALHEDIQILDNHVPLSFEVKDGKLIG 312
Query: 221 MQFNRT----EQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKY 274
M+F + + N K + + +E + L+A+ ++ A G +N +E ++ D++
Sbjct: 313 MKFQKVKAVYDDNGKRQLLPTDEPEVFLEADEVLIAIGQ---ENSFPWIERDLGLEFDQW 369
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
G P V+ T +++ VF GGD A + +V G AA IH + + KN
Sbjct: 370 GMPVVDSVTYQSTLSTVFFGGDAAFGPKNVITAVAQGHQAAVSIHLFCEGKN 421
>gi|417009105|ref|ZP_11945765.1| dihydroorotate dehydrogenase 1B, partial [Lactobacillus helveticus
MTCC 5463]
gi|328465360|gb|EGF36609.1| dihydroorotate dehydrogenase 1B [Lactobacillus helveticus MTCC
5463]
Length = 306
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++ +V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKMAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+I +IAKAA G ADG+S INT+ G+ P GG
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINTLLGMRIDIKTRKPLLG------HNMGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 218 LSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 270
>gi|222151024|ref|YP_002560178.1| dihydroorotate dehydrogenase [Macrococcus caseolyticus JCSC5402]
gi|222120147|dbj|BAH17482.1| dihydroorotate dehydrogenase [Macrococcus caseolyticus JCSC5402]
Length = 305
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E+++K A ALELN+SCP+ + G+ G DP+ + ++ V++ +P
Sbjct: 105 EDYVEVAEKISNAPNVCALELNISCPN---VKEGGIQFGTDPDTAKELTRKVKAVSSVPV 161
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+TNI D+AKA E ADG++ INT+ GL G P + GG+S
Sbjct: 162 YVKLSPNVTNIVDMAKAVAE-YADGITMINTLVGLRVNEKTGTPIIS------NIIGGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
G A +P+ ++ V + + PN PI+ +GG+ A + +I GA AV + +A Q+ TV
Sbjct: 215 GPAVKPVAMRMVYEVRRALPNIPIIAMGGVTEAQDVIDYISVGADAVAVGTA-NFQNPTV 273
Query: 756 VDDYITGLQTLL 767
D I L L
Sbjct: 274 CKDIIDALPGFL 285
>gi|383319541|ref|YP_005380382.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Methanocella
conradii HZ254]
gi|379320911|gb|AFC99863.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Methanocella
conradii HZ254]
Length = 466
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 21/292 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EVE VK LGV+I + + ITI++L GY A+F+G G
Sbjct: 186 IPEFRLPKAIVEKEVEYVKSLGVEIRLNHVVG-KTITIDELFDAGYEAVFVGSGAG---- 240
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F + E G Y++ FL RV + PI +G V V+G G+ A
Sbjct: 241 LPSFMHIPGENLNGVYSANEFLTRVNLMRAFRF----PEYDTPIKRGRNVAVVGGGNVAM 296
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A +A R GA V +++R+G + A EEV+ A EE EF M+P ++ +VK
Sbjct: 297 DAARTAKRLGAEHVYLIYRRGEEEMPARREEVEHAKEEGIEFRLLMNPTRIIGDEQRNVK 356
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ ++ + V + + +I A G++ N ++ P ++ K
Sbjct: 357 AIECICMELGEPDETGRRAPVCKPGSETTMDVDTVIIAIGTS--PNPLIAKATPGLRTGK 414
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+G EV T TS GVF GGD + + T + ++ K AA I +YI+ K
Sbjct: 415 HGVLEVEPYTFKTSREGVFAGGDIVSGAATVISAMGQAKEAAKAIDEYIKNK 466
>gi|260101461|ref|ZP_05751698.1| dihydroorotate oxidase [Lactobacillus helveticus DSM 20075]
gi|260084735|gb|EEW68855.1| dihydroorotate oxidase [Lactobacillus helveticus DSM 20075]
Length = 307
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++ +V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKMAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+I +IAKAA G ADG+S INT+ G+ P GG
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINTLLGMRIDIKTRKPLLG------HNMGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 218 LSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 270
>gi|385813517|ref|YP_005849910.1| Dihydroorotate dehydrogenase 1B [Lactobacillus helveticus H10]
gi|323466236|gb|ADX69923.1| Dihydroorotate dehydrogenase 1B [Lactobacillus helveticus H10]
Length = 307
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 115/181 (63%), Gaps = 13/181 (7%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++++V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKTAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVGTKKLTTYG 692
P +VKLTPN+T+I +IAKAA G ADG+S INT L+ + D P +G G
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINT---LLGMRIDIKTRKPLLGHN----MG 216
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQD 752
G+SG A +P+ ++ +S + + PI+G+GGI+SA ++F+ AGA+AV + +A N +
Sbjct: 217 GLSGEAVKPIAIRMISQV-RQATTLPIIGMGGINSAQDVIEFMLAGANAVAVGTAHFNDE 275
Query: 753 F 753
Sbjct: 276 L 276
>gi|161508237|ref|YP_001577727.1| dihydroorotate dehydrogenase 1B [Lactobacillus helveticus DPC 4571]
gi|172048331|sp|A8YVZ9.1|PYRDA_LACH4 RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|160349226|gb|ABX27900.1| Dihydroorotate dehydrogenase [Lactobacillus helveticus DPC 4571]
Length = 307
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++DD++E++KK +G +ALE+N+SCP+ + + GM + G +V ++ ++ +V +
Sbjct: 107 SEDDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEELTKKIKMAVAL 163
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+I +IAKAA G ADG+S INT+ G+ P GG
Sbjct: 164 PIYVKLTPNVTDIVEIAKAAESGGADGISMINTLLGMRIDIKTRKPLLG------HNMGG 217
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ ++ +S + + PI+G+GGI +A ++FI AGA+AV + SA
Sbjct: 218 LSGEAVKPIAIRMISQV-RQVTQLPIIGMGGISTAQDVIEFILAGANAVAVGSA 270
>gi|392425358|ref|YP_006466352.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
acidiphilus SJ4]
gi|391355321|gb|AFM41020.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
acidiphilus SJ4]
Length = 402
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 8/221 (3%)
Query: 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KI 633
K++W L+ + +AGAD LE ++S PHG E G+G Q+P I WV+ + K+
Sbjct: 112 RKEEWQMLAYRMAEAGADLLECSISFPHG-AEWGLGSKI-QEPSSTEEIVRWVKEAAGKV 169
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVGTKKLTTYG 692
P VKL+ ++I A A G A+GV A+NT+ ++ + D P+P + L+TYG
Sbjct: 170 PVVVKLSAQDSDIIATATAVERGGAEGVCALNTLKSIIGVDLDTLIPYPNIA--GLSTYG 227
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQD 752
G+SG A +P+ L+ + IA+ N I GGI + +F+ GA ++Q+C+AV
Sbjct: 228 GLSGPALKPIALRCTAEIAQKL-NLDIAASGGITTWQDGAEFLLLGASSLQLCTAVLRFG 286
Query: 753 FTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKP 792
F ++ + I+GL+ + KS Q L G+S P V P
Sbjct: 287 FGIIRELISGLKGWMEEKSFQNLTDVIGRSLPYLVGHSHLP 327
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRI 405
VD++V+ CG + NPF LA +P T + +AFE GW AV KT S+ ++V V P +
Sbjct: 3 VDLTVDFCGFQLENPFVLAPSPSTDKVDQLTQAFEAGWAGAVLKTVSVDSNVVRRVFPLV 62
Query: 406 VKGTTSRHLYGPEQGSFLNIELISEKT 432
++ + G + NI+LISE +
Sbjct: 63 MRVEHLKDFIGLQ-----NIDLISEHS 84
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
++ DVIG+++ + ++ L QVV+ I D+C CG CY C G+ AI ++ Q
Sbjct: 308 NLTDVIGRSLPYLVGHSHLPRGIQVVSNIQVDLCNQCGGCYRVCRTGGHDAIFWNEGFPQ 367
Query: 550 AHVTDECTGCTLCLSI 565
+ +C GC LC +I
Sbjct: 368 VDL-KKCIGCGLCQAI 382
>gi|325663471|ref|ZP_08151881.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 4_1_37FAA]
gi|331087003|ref|ZP_08336078.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470370|gb|EGC73601.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409453|gb|EGG88896.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 300
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +K+D+ E+ ++ D LE+N+SCP+ + G+A GQ+P+ I+ V+
Sbjct: 99 VCGRSKEDYCEVVERLASEDVDMLEINISCPN---VKEGGIAFGQNPKAAEEITSAVKKY 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT++AKA G AD VS INT++G M + + A+ K
Sbjct: 156 AKQPVIMKLSPNVTDITEMAKAVEAGGADAVSLINTLTG-MKIDVHRRAF-ALANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GGVSG A +P+ ++ V +A N PI+G+GGI +A+ A++FI AGA AV + +A
Sbjct: 211 -GGVSGPAIKPIAVRMVYQVANAV-NIPIIGMGGIATAEDAIEFILAGASAVSVGTA 265
>gi|386810756|ref|ZP_10097982.1| glutamate synthase [planctomycete KSU-1]
gi|386405480|dbj|GAB60863.1| glutamate synthase [planctomycete KSU-1]
Length = 797
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 24/298 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EVE ++ LGVKIE + T+++L ++G+ AIF+G G
Sbjct: 508 IPEFRLPKAIVESEVEYLRKLGVKIEVNAVIGKVQ-TVDELLENGFDAIFVGTGAG---- 562
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDTAF 160
+P+F G+ E G Y++ +L RV + S PI ++ V V+GAG+ A
Sbjct: 563 LPMFMGIPGENMNGVYSANEYLTRVNLMKAYN-----SQYSTPIAMRKNVAVIGAGNVAM 617
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK--I 218
D A +ALR GA V VV+R+ + A +E+ EE +F +P+++ + D K +
Sbjct: 618 DAARTALRLGAENVYVVYRRSRDEMPARVDEIHHGEEEGLQFRFLTNPIKI-LGDEKGWV 676
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGSTLLDNDVLEAIKP-VKLD 272
+G++ + E E + +K L +I A G+ N ++ + P ++++
Sbjct: 677 SGLECVKMELGEPDDSGRRRPIPVKGSEFVLNVECVIMAIGNG--PNPLVPSTTPDLQVN 734
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTV 330
K+G + T T+ GVF GGD + T + ++ GK AA I +YI+ K + TV
Sbjct: 735 KWGNIVADIETCKTNKEGVFAGGDIVTGAATVILAMGAGKKAAKAIDEYIRSKKSNTV 792
>gi|295425253|ref|ZP_06817956.1| dihydroorotate oxidase [Lactobacillus amylolyticus DSM 11664]
gi|295065029|gb|EFG55934.1| dihydroorotate oxidase [Lactobacillus amylolyticus DSM 11664]
Length = 318
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 116/183 (63%), Gaps = 16/183 (8%)
Query: 570 IMCTYNKDD---WLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + DD ++E+++K +G + LE+N+SCP+ RG G++ G P+++ +++
Sbjct: 110 IMASVGGDDEAGYVEVARKLSASGLVNTLEINVSCPNV--ARG-GMSFGVHPDVIEDLTK 166
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVG 684
++ V IP +VKLTPN+T+I +IAKAA G ADG+S INTV G+ + L + P +G
Sbjct: 167 KIKDVVNIPIYVKLTPNVTDIVEIAKAAQAGGADGISMINTVLGMEIDLKSR---KPVLG 223
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG SG+A +P+ ++ ++ + + + PI+G+GGI++A+ ++F AGA AV +
Sbjct: 224 HN----MGGFSGHAIKPIAIRMIAQVHQAV-DLPIIGMGGIETAEDVVEFFLAGASAVAV 278
Query: 745 CSA 747
+A
Sbjct: 279 GTA 281
>gi|150391898|ref|YP_001321947.1| dihydroorotate dehydrogenase 1B [Alkaliphilus metalliredigens QYMF]
gi|189038413|sp|A6TVS0.1|PYRDB_ALKMQ RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|149951760|gb|ABR50288.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
metalliredigens QYMF]
Length = 302
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 110/200 (55%), Gaps = 15/200 (7%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
+D+ E+ KK A D LELN+SCP+ + G+ G DP MV ++ V+ K P
Sbjct: 108 EDYCEVVKKLGDADVDLLELNISCPN---VKAGGVCFGTDPFMVEEVTKAVKKVAKQPLI 164
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKLTPN+T+I IAKAA G ADG+S INT+ G+ P A GG SG
Sbjct: 165 VKLTPNVTDIVPIAKAAVAGGADGISLINTLLGMAIDIHKRKPILA------NVMGGFSG 218
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA-VQNQDFTV 755
A +P+ L+ V +A + PI+G+GGI + + A++FI AGA V + +A N T+
Sbjct: 219 PAIKPVALRMVYQVANAV-DVPIIGMGGIMTGEDAVEFILAGASGVAVGTANFINPRATI 277
Query: 756 VDDYITGLQTLLYLKSTQLK 775
D I G+Q Y++ +K
Sbjct: 278 --DVIEGIQG--YMEQYSIK 293
>gi|240143893|ref|ZP_04742494.1| dihydroorotate oxidase [Roseburia intestinalis L1-82]
gi|257204085|gb|EEV02370.1| dihydroorotate oxidase [Roseburia intestinalis L1-82]
gi|291535019|emb|CBL08131.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Roseburia intestinalis M50/1]
gi|291539583|emb|CBL12694.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Roseburia intestinalis XB6B4]
Length = 302
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 125/208 (60%), Gaps = 19/208 (9%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C + +++E+ + D LE+N+SCP+ + G+A GQ+P+MV +I+ +++
Sbjct: 99 VCGHTTSEYIEVVDRLADQPVDLLEINISCPN---VKEGGIAFGQNPKMVEDITREIKAH 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT++A+AA G ADG+S INT++G M + + A+ +
Sbjct: 156 AKQPVIMKLSPNVTDITEMARAAEAGGADGLSLINTLTG-MKIDIHRRTF-ALANRT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
GG+SG A P+ ++ V A+ N PI+G+GGI +AD A++ I AGA AV + +A
Sbjct: 211 -GGMSGPAVHPVAVRMVYQTAQAV-NIPIVGMGGIMNADDAIEMILAGATAVSVGTA--- 265
Query: 751 QDFT---VVDDYITGLQTLLYLKSTQLK 775
+FT V + + G++ Y++ Q+K
Sbjct: 266 -NFTNPQVTMEIVDGIRD--YMERYQVK 290
>gi|386758277|ref|YP_006231493.1| dihydroorotate dehydrogenase 1B [Bacillus sp. JS]
gi|384931559|gb|AFI28237.1| dihydroorotate dehydrogenase 1B [Bacillus sp. JS]
Length = 311
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 EDYVEVAEHISKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSNVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+TNIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVTNITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPVVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|402836355|ref|ZP_10884895.1| putative dihydroorotate oxidase, catalytic subunit [Mogibacterium
sp. CM50]
gi|402271451|gb|EJU20695.1| putative dihydroorotate oxidase, catalytic subunit [Mogibacterium
sp. CM50]
Length = 304
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 17/178 (9%)
Query: 574 YNKDDWLELSKKTEKAG-ADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRS 629
++ +++ E++ K + +G AD LE+N+SCP HG G A G DP+ I+ VR+
Sbjct: 106 FSTEEFAEVASKIDASGYADILEVNISCPNVEHG------GSAFGADPKASERITRAVRA 159
Query: 630 SVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689
K+P F+KLTPN+T++T+IA+A G ADG+S IN + + G A+
Sbjct: 160 VTKLPVFMKLTPNVTDVTEIARACAAGGADGISMINNFKAMRIDLSTGTTVTAM------ 213
Query: 690 TYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
Y G+SG A RP+ + V+ + PI+GIGGI +AD L+ I +GA A++I SA
Sbjct: 214 KYAGLSGPAIRPIAQRMVNEVFHAV-KLPIIGIGGIRTADDVLEMIMSGATAIEIGSA 270
>gi|410671687|ref|YP_006924058.1| dihydroorotate dehydrogenase 1B [Methanolobus psychrophilus R15]
gi|409170815|gb|AFV24690.1| dihydroorotate dehydrogenase 1B [Methanolobus psychrophilus R15]
Length = 300
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IASI N ++ ++ AG DA ELN+SCPH +G G + G D V I+
Sbjct: 92 VIASIFGG-NAQEFAIVADGLVDAGPDAFELNVSCPH---AQGYGASIGCDACAVEEITA 147
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V ++P +VKLTPN+T+I I KAA G AD V AINTV G+ G +P +G
Sbjct: 148 AVCDITELPVWVKLTPNVTDIVSIGKAAQRGGADAVVAINTVRGMAIDIHSG--YPVLGN 205
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ +GG+SG A +P+ +K V + + PI+G+GGI + + A++ + AGA AVQI
Sbjct: 206 R----FGGLSGRAIKPVAIKCVYDLYAAL-DIPIIGVGGISTWEDAVEMMMAGASAVQIG 260
Query: 746 SAVQN 750
SAV +
Sbjct: 261 SAVHD 265
>gi|84616863|emb|CAJ13757.1| NADPH-dependent glutamate synthase, small subunit [Desulfococcus
multivorans]
Length = 470
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 29/293 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EV+ ++ LGV + C + R +T+++L ++GY A+++G+G
Sbjct: 189 IPEFRLPKAIVAHEVDFLERLGVHVACNMVVG-RTVTVDELFQEGYDAVYVGVGAG---- 243
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F + E +G ++ +L R + PI G V+VLGAG+ A
Sbjct: 244 LPRFMNIPGENLIGILSANEYLTRANLMKAYKF----PEVDTPIPMGKNVVVLGAGNVAM 299
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
D A +A+R GA+ V +V+R+ + A E+ A EE EF +PVQ D ++
Sbjct: 300 DAARTAMRLGADSVKIVYRRSRDEMPARTAEIHHAEEEGIEFFLLTNPVQYLGNDQGRLT 359
Query: 220 GMQFNRTEQNEKGEWVEDEEQR---------IKLKANYIISAFGSTLLDNDVL-EAIKPV 269
GM+ + E E +D +R ++ + +I A GS N +L ++ + +
Sbjct: 360 GMECLKMELGEP----DDSGRRRPVPISGSNFEMACDLVIVAVGSGA--NPLLTQSTEDM 413
Query: 270 KLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
L+++GY + T T+ GV+ GGD + T + ++ G+ AA IH+Y+
Sbjct: 414 TLNRWGYIAADPETGKTTKRGVWAGGDIVTGAATVILAMGAGRKAADSIHEYL 466
>gi|115524609|ref|YP_781520.1| putative trifunctional 2-polyprenylphenol hydroxylase/glutamate
synthase subunit beta/ferritin domain-containing protein
[Rhodopseudomonas palustris BisA53]
gi|115518556|gb|ABJ06540.1| glutamate synthase (NADPH), homotetrameric [Rhodopseudomonas
palustris BisA53]
Length = 994
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 33/296 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKD-GYTAIFIGIGKPNAN 102
IP +RLP + ++ E++ +KD+GVK E + + + TI++L D G+ AIF+ G
Sbjct: 475 IPSFRLPRNIIDREIQRLKDIGVKFETNKVVG-KTFTIDQLMGDRGFDAIFVAAGAGA-- 531
Query: 103 VIPIFQGLTEEMG--FYTSKTFLPRVATSSKKGLCGGCKKESL--PILKG-TVIVLGAGD 157
P F G+ E Y++ FL R+ L GG + L P+ G +V+V+GAG+
Sbjct: 532 --PTFLGIPGEFAGRVYSANEFLTRI------NLMGGDQFPYLDTPVSVGQSVVVIGAGN 583
Query: 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK 217
TA DC A R GA V V+R+ A EE++ A EE +F SPV++ V +
Sbjct: 584 TAMDCLRVARRIGAATVRCVYRRSEAEAPARIEEIRHAKEEGVDFFFLHSPVEILVTEAG 643
Query: 218 IAGMQFNRTEQNEKGEWVEDEEQR---------IKLKANYIISAFGSTLLDNDVLEAIKP 268
+ ++ R ++ E GE DE R I+L+ + +I A G+ N ++ P
Sbjct: 644 V--VRAVRLQKMELGE--PDERGRRKPIALDEFIELECDTVIYALGTK--PNPIIGQATP 697
Query: 269 -VKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
+ L+K+G + T +T++PGVF GGD T + +++ G+ AA I +++
Sbjct: 698 GLTLNKWGNIAADDDTQSTNMPGVFAGGDIVTGGATVILAMSAGRRAAKSIAAWLR 753
>gi|383754986|ref|YP_005433889.1| putative glutamate synthase (NADPH), homotetrameric [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381367038|dbj|BAL83866.1| putative glutamate synthase (NADPH), homotetrameric [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 467
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 147/296 (49%), Gaps = 23/296 (7%)
Query: 44 IPQYRLPFDAV-NFEVELVKDLGVKIECERSLSTRDITIEKL-RKDGYTAIFIGIGKPNA 101
IP++RLP D V E+ ++ LGVK E S++ R T+++L ++G++A+FIG G
Sbjct: 183 IPEFRLPKDGVVKKEIANLEKLGVKFEL-NSVAGRLFTVDELMEEEGFSAVFIGTGAG-- 239
Query: 102 NVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDT 158
+P FQG+ E G Y++ FL R + + PI G V V+G G+
Sbjct: 240 --LPRFQGIPGESLSGVYSANEFLTRCNLMKAYKF----PEYATPIKIGKHVAVIGGGNV 293
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-- 216
A D A +ALR GA KV +V+R+ + A EEV+ A EE EF +PV++ +N
Sbjct: 294 AMDAARTALRLGAEKVYIVYRRSEAELPARKEEVEHAKEEGIEFKLLNNPVEILGDENGW 353
Query: 217 ----KIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ M+ +++ + V L+ +I + G+ N ++ P + +
Sbjct: 354 VSSMRCIKMELGEPDESGRRRPVAIAGSEFDLEVETVIVSIGTG--PNPIISQTTPGLDI 411
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
K G + T ATS PGVF GGD + T + ++ G+ AA I +Y+Q K
Sbjct: 412 TKRGNIAADEETGATSKPGVFAGGDIVTGAATVILAMGAGRKAAAAIDEYLQGKRK 467
>gi|126649697|ref|ZP_01721933.1| dihydroorotate dehydrogenase [Bacillus sp. B14905]
gi|126593416|gb|EAZ87361.1| dihydroorotate dehydrogenase [Bacillus sp. B14905]
Length = 303
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ T +D++E++++ A ALELN+SCP+ + G+ G DP R +
Sbjct: 96 IIANVAGT-ETEDYVEVARRISAAPNVQALELNISCPN---VKCGGIQFGTDPTTARELV 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V++ +P +VKL+PN+TNI DIA A G ADG++ INT+ G+ G P A G
Sbjct: 152 KAVKAVSTVPVYVKLSPNVTNIVDIALAVEAGGADGITMINTLVGMRLDERTGKPVIANG 211
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T GG+SG A +P+ ++ V + K N PI+G+GG+ A + F+ AGA AV +
Sbjct: 212 T------GGLSGPAVKPVAIRMVYEVYKAV-NIPIIGMGGVTEAQDVIDFMSAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|319649633|ref|ZP_08003789.1| dihydroorotate dehydrogenase [Bacillus sp. 2_A_57_CT2]
gi|317398795|gb|EFV79477.1| dihydroorotate dehydrogenase [Bacillus sp. 2_A_57_CT2]
Length = 313
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 111/173 (64%), Gaps = 11/173 (6%)
Query: 576 KDDWLELSKK-TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
++D++ ++K+ +E ALELN+SCP+ + G+A G PE+ +N++ V+ ++P
Sbjct: 105 EEDYVAVAKRISESPNVHALELNISCPN---VKTGGIAFGTIPEIAKNLTKKVKEVSEVP 161
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+TNI ++AKA +G ADG++ INT+ G+ G+P A T GG+
Sbjct: 162 VYVKLSPNVTNIVEMAKAVEDGGADGLTMINTLVGMRIDLKTGSPVLANRT------GGL 215
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG A +P+ L+ + +++ + PI+G+GGI+SA+ +++ AGA AV + +A
Sbjct: 216 SGPAIKPVALRMIYEVSQQV-SLPIIGMGGIESAEDVIEYFYAGASAVAVGTA 267
>gi|389573324|ref|ZP_10163399.1| dihydroorotate dehydrogenase 1B [Bacillus sp. M 2-6]
gi|388427021|gb|EIL84831.1| dihydroorotate dehydrogenase 1B [Bacillus sp. M 2-6]
Length = 310
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
DD++E++K+ +A ALELN+SCP+ + G+A G DPEM ++ V+ +P
Sbjct: 104 DDYVEVAKQISQASNVHALELNISCPN---VKTGGIAFGTDPEMAATLTKAVKEVSSVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NI +IAKA ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANIVEIAKAIESAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ + PI+G+GG+ SA+ L+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVHEVSQAV-SIPIIGMGGVQSAEDVLEFLLAGASAVAVGTA 265
>gi|384175296|ref|YP_005556681.1| dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. subtilis str. RO-NN-1]
gi|349594520|gb|AEP90707.1| dihydroorotate dehydrogenase, catalytic subunit [Bacillus subtilis
subsp. subtilis str. RO-NN-1]
Length = 311
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E+++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 EDYVEVAEHISKAPNVYALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSNVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V ++++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQVV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|337284244|ref|YP_004623718.1| dihydroorotate dehydrogenase 1B [Pyrococcus yayanosii CH1]
gi|334900178|gb|AEH24446.1| dihydroorotate dehydrogenase 1B [Pyrococcus yayanosii CH1]
Length = 298
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIA 650
ADA ELNLSCPH +G G+ GQ EMV + V+ + P KLTPN+ +IT +
Sbjct: 115 ADAFELNLSCPHA---KGYGMEIGQKDEMVYEVVKAVKDATDKPVIAKLTPNVADITKLG 171
Query: 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSI 710
AA + +ADGVSAINT L + + D + + ++ GG SG +P+ L+AV +
Sbjct: 172 LAAEKAEADGVSAINT---LKATAIDIYARKPILSNRV---GGYSGPGIKPVALRAVYDL 225
Query: 711 AKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767
AK + P++GIGGI + A++F+ AGA A+QI + V + F+V + G++ L
Sbjct: 226 AKAL-DIPVIGIGGITTWQDAVEFLLAGASALQIGTGVALKGFSVFREISDGIKRYL 281
>gi|336122242|ref|YP_004577017.1| dihydroorotate dehydrogenase [Methanothermococcus okinawensis IH1]
gi|334856763|gb|AEH07239.1| dihydroorotate dehydrogenase family protein [Methanothermococcus
okinawensis IH1]
Length = 304
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 14/212 (6%)
Query: 566 LIASIMCTYNKD--DWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
LI SI Y KD ++ E+++ E + +ELN+SCPH G G G GQ+P++ +
Sbjct: 97 LIGSI---YGKDQKEFSEVAEIIEPY-VELIELNISCPHAGG--GYGAQIGQNPDLSYKV 150
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
V+ +V IP KLTPN+ +I +IAK E ADG++AINT+ M + + P +
Sbjct: 151 VSAVKDAVNIPVIAKLTPNVVDIKEIAKTVVEAGADGITAINTLGPGMVIDIE-TQKPIL 209
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G + +GG+SG A +P+ +K V I + + PI+G+GGI + ++F+ AGA AVQ
Sbjct: 210 GNR----FGGMSGPAIKPIAIKNVYDIYSVV-DVPIIGVGGITTGYDVIEFMLAGAQAVQ 264
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
+ + + + + + + ++ L K+ +LK
Sbjct: 265 VGTGIYYRGYDIFNKICDEMKLFLKDKNLKLK 296
>gi|218778074|ref|YP_002429392.1| dihydropyrimidine dehydrogenase [Desulfatibacillum alkenivorans
AK-01]
gi|218759458|gb|ACL01924.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Desulfatibacillum
alkenivorans AK-01]
Length = 695
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 154/309 (49%), Gaps = 32/309 (10%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP +++E++ + DLG++ + + D + L ++G+ A+F+GIG
Sbjct: 336 IPEYRLPKKILDWEIQGILDLGIEAKTDARFGF-DFNLSDLMEEGFDAVFMGIGAWKDMK 394
Query: 104 IPIFQGLTEEM-GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDC 162
+ + E+M G +T FL RVA E + I K +IV G G+TA DC
Sbjct: 395 L---RAEGEDMEGCFTGIDFLARVANG-----------EKVKIGKNPIIV-GGGNTAIDC 439
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIAGM 221
+ +R G +KV + +R+ + A E+ A E C+F+ +P +V +N K+ G+
Sbjct: 440 VRTLIRMG-SKVTLAYRRTRAEMPANEVEIVAAEHEGCDFVFLAAPTRVVGDENGKVIGL 498
Query: 222 QFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGS----TLLDNDVLEAIKPVKLD 272
++ + E E + V E L A+ I+SA G + +DN +A+ +K
Sbjct: 499 EYQKMELGEPDASGRRRPVPVEGSETILDADMIVSAIGQRPDISFMDNPE-KALADLKTT 557
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVP- 331
++ + N T+ T +P +F GGD+A D V ++ G+ AA IH+++ + P
Sbjct: 558 RWDTMDHNEDTLQTDIPFIFVGGDSATGPDLVVSAIGGGRKAARSIHQFVMGEEVKAAPK 617
Query: 332 --DKPCLPK 338
KP +P+
Sbjct: 618 DLKKPLIPE 626
>gi|297569958|ref|YP_003691302.1| dihydroorotate dehydrogenase family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925873|gb|ADH86683.1| dihydroorotate dehydrogenase family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 308
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 17/191 (8%)
Query: 558 GCTLCLSILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQD 616
G T+ ++IL ++ D++ +L+++ + G ALE+N+SCP+ + G+A G D
Sbjct: 98 GATVVVNILGNTV------DEYAQLARRLDGIEGVTALEVNISCPN---VKEGGVAFGTD 148
Query: 617 PEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD 676
P M ++ VR + K+P +KL+PN+T+I +A++ E AD VS INT+ G+ A
Sbjct: 149 PLMASAVTAAVRRASKLPLIIKLSPNVTDIQLMARSVAESGADAVSLINTLLGMAIDLAG 208
Query: 677 GNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQ 736
P + GG+SG A +P+ L+ V A+ P++GIGGI +A+ AL+FI
Sbjct: 209 RRP------RLANVVGGLSGPAIKPVALRMVWQAAQAV-KIPVIGIGGIMTAEDALEFIV 261
Query: 737 AGAHAVQICSA 747
AGAHAVQ+ +A
Sbjct: 262 AGAHAVQVGTA 272
>gi|134046225|ref|YP_001097710.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis C5]
gi|132663850|gb|ABO35496.1| dihydroorotate oxidase B, catalytic subunit [Methanococcus
maripaludis C5]
Length = 304
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 14/192 (7%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I SI Y K+D E K E G D LELN+SCPH G G G + GQDP + +N+
Sbjct: 97 IIGSI---YGKNDS-EFQKAAEIIGNYVDVLELNISCPHAGG--GYGSSIGQDPCLCKNV 150
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
V IP KLTPN+T+I +IA A ADG+ AINT+ M + + + P +
Sbjct: 151 VSAVNDVSDIPVIAKLTPNVTDIKEIANAVINAGADGIVAINTLGPGMVIDIE-SGVPIL 209
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K GG+SG A +P+ +K V I + P++G+GGI + A++F+ AGA AVQ
Sbjct: 210 GNK----VGGMSGKAIKPIAVKNVYDICSAV-DVPVIGVGGITTGADAIEFMMAGASAVQ 264
Query: 744 ICSAVQNQDFTV 755
+ + V + + +
Sbjct: 265 VGTGVYYRGYDI 276
>gi|302385847|ref|YP_003821669.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Clostridium saccharolyticum WM1]
gi|302196475|gb|ADL04046.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Clostridium saccharolyticum WM1]
Length = 904
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 144/289 (49%), Gaps = 20/289 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP +RL + +N E+++++++GV + + +DIT+++LRK+GY A ++ IG
Sbjct: 501 IPSFRLEKEVLNAEIDVLREMGVAFQTGIEVG-KDITLQELRKEGYEAFYLAIGAQGGRS 559
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ I +G E G + FL V K L G V+V+G G+ A D A
Sbjct: 560 LGI-EGEDAE-GVISGVDFLRNVNLGRKAEL------------SGNVVVIGGGNVAIDVA 605
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
+ +R GA+ V + + + A+PEE+ A E+ F P ++ +D K+ G++F
Sbjct: 606 RTGVRQGASAVNLYCLESPGEMPALPEEIAEAEEDNVSFHNGWGPKRILTEDGKVTGVEF 665
Query: 224 NRT----EQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
R +++ + DE I ++A+ ++ + G ++ +L K V+L + G +
Sbjct: 666 KRCISVFDEDHRFAPKYDENDTITVEADTVLLSIGQSIEWGGLLSDSK-VELGRGGTAKA 724
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNL 328
+ T+ TS P VF GGD + ++ GK A IH+Y+Q +L
Sbjct: 725 DSLTLQTSEPDVFVGGDCFTGPQFAIHAIAAGKEGAISIHRYVQPGQSL 773
>gi|389852823|ref|YP_006355057.1| dihydroorotate dehydrogenase 1B [Pyrococcus sp. ST04]
gi|388250129|gb|AFK22982.1| dihydroorotate dehydrogenase 1B [Pyrococcus sp. ST04]
Length = 276
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 14/210 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI SI ++ K TE A DA ELNLSCPH +G G+ GQ PE V +
Sbjct: 69 LIVSIFAGTPEEFAFLAEKLTEIA--DAFELNLSCPHA---KGYGMEIGQRPENVYEVVR 123
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+ + P KLTPN +IT + AA + AD VSAINTV +++ D + +
Sbjct: 124 KVKDATDKPVIAKLTPNTDDITKLGLAAEKAGADAVSAINTVK---AIAIDIYARRPILS 180
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
K+ GG SG +P+ L+A+ +A++ P++GIGGI + A++F+ AGA A+QI
Sbjct: 181 NKV---GGYSGPGIKPIALRAIYDLARVL-EIPVIGIGGITTWQDAVEFLLAGASALQIG 236
Query: 746 SAVQNQDFTVVDDYITGLQTLLYLKSTQLK 775
+AV + F+V + G++ YLK +
Sbjct: 237 TAVYLRGFSVFREISEGIKR--YLKEEGFR 264
>gi|170289867|ref|YP_001736683.1| dihydroorotate dehydrogenase family protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173947|gb|ACB07000.1| dihydroorotate dehydrogenase family protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 275
Score = 113 bits (282), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 12/194 (6%)
Query: 582 LSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP 641
++ + + G DA+ELN SCPH RG GL G PE++R + VR +VKIP VKL+P
Sbjct: 86 VAGRLQDCGVDAVELNASCPH---VRGHGLEVGSTPELMRELVSEVRRNVKIPIIVKLSP 142
Query: 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701
+ +I + ++A+E AD ++AINTV M + + P + K +GG+SG A RP
Sbjct: 143 MVPDIASLGRSAFESGADALNAINTVRA-MYIDVEAMT-PVLSNK----FGGLSGPAIRP 196
Query: 702 MGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYIT 761
+ ++ V +A + ++G GG+++ A++ + AGA AV I +A+ + V ++
Sbjct: 197 IAVRCVYELAGI---CDVIGTGGVETWRDAVEMMLAGAKAVGIGTAIYRRGLEVFEEINR 253
Query: 762 GLQTLLYLKSTQLK 775
GL++ L K L+
Sbjct: 254 GLESYLLKKGLSLR 267
>gi|375083592|ref|ZP_09730611.1| putative oxidoreductase [Thermococcus litoralis DSM 5473]
gi|374741785|gb|EHR78204.1| putative oxidoreductase [Thermococcus litoralis DSM 5473]
Length = 480
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 164/290 (56%), Gaps = 18/290 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ E+ + +LGV+I+ + + + +T+E+L ++ Y A+FIG G +
Sbjct: 199 IPEFRLPKEILDKEIAKLHELGVEIKLDH-IVGKTVTLEELLEE-YDAVFIGTGAGTPKL 256
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ I L + + YT+ FL R+ + K E + I K T IV+GAG+TA D A
Sbjct: 257 LNIPGILLDRI--YTANEFLTRI--NLMKAYLFPEYDEPIAIGKKT-IVIGAGNTAMDAA 311
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGMQ 222
SALR G+ +V++ +R+G ++ A EE+ A EE +F F++PV+ + ++ K+ ++
Sbjct: 312 RSALRMGS-EVVIAYRRGREDMTARIEEITHAEEEGVKFEFFLNPVEFIGDENGKVKAVK 370
Query: 223 FNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLDKYGY 276
F + E++ KG+ + + + L+A+ +I + G L N ++ E +K + G
Sbjct: 371 FEKMRPLGERDAKGKRRIVGTGEYVTLEADTVIISIG--LEPNRIISEEATALKTNPDGT 428
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DGK AA I +YI++K
Sbjct: 429 LVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGKKAAKAIDEYIKKKR 477
>gi|326202555|ref|ZP_08192423.1| glutamate synthase (NADPH), homotetrameric [Clostridium
papyrosolvens DSM 2782]
gi|325987139|gb|EGD47967.1| glutamate synthase (NADPH), homotetrameric [Clostridium
papyrosolvens DSM 2782]
Length = 464
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 25/293 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E++ VKDLGV ++ + R ++++ L+ +GY AIFIG G
Sbjct: 183 IPEFRLPKTLVQQEIQTVKDLGVDVQTNMVIG-RVLSVDDLKAEGYKAIFIGSGAG---- 237
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESL--PILKG-TVIVLGAGDT 158
+P F G+ E G Y++ FL R+ L G K S P+ G V V+G G+
Sbjct: 238 LPSFMGIPGENYNGVYSANEFLTRI------NLMGAYKFPSTDTPVFVGKNVAVVGGGNV 291
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNK 217
A D A SA R GA V +++R+ + A EEV A EE F +P QV +D
Sbjct: 292 AMDAARSAKRLGAENVYIIYRRSEAEMPARLEEVHHAKEEGIIFKVLTNPKQVLGTEDGW 351
Query: 218 IAGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ GM+ E E + VE + + +I A G + N ++ + P + +
Sbjct: 352 VKGMECVEMELGEPDKSGRRRPVEKKGSEHVVDLETVIIAIGQS--PNPLISSTTPGLDI 409
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
+G V T ATS GV+ GGD + T + ++ GK AA I K+I++
Sbjct: 410 QSWGGIIVEEETGATSKSGVYAGGDAVTGAATVILAMGAGKKAAEAIDKFIRQ 462
>gi|146295665|ref|YP_001179436.1| molybdopterin oxidoreductase [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145409241|gb|ABP66245.1| molybdopterin oxidoreductase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 1178
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 27/288 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E+EL++ +GV+I+ L DI++E LRK+ Y A+F+ +G ++
Sbjct: 235 IPEYRLPKGILDKEIELIEKMGVQIKTNMRLGV-DISLEYLRKN-YDAVFLAVGAWKSST 292
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDTAFDC 162
+ E G FL +V+ + P+ L V+V+G G+TA D
Sbjct: 293 LGCPGDSAE--GVIGGIEFLRKVSMNQ-------------PVNLGQRVLVVGGGNTAMDA 337
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
A +A+R GA +V V++R+ + A EV A EE +F ++P++V ++ ++
Sbjct: 338 ARTAIRLGAKEVTVLYRRTREEMPAEDIEVNEAEEEGVKFQFLVAPIEVITDGGRVRALK 397
Query: 223 FNRT---EQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
R + +E G V E + +A+ IISA G + +E ++ ++L ++G
Sbjct: 398 CQRMRLGDMDESGRRRPVPIEGAEVIFEADTIISAIGQKVR----VEDVEGLELTRHGTI 453
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+V+ T TS+ GVF GGD +E++ GK AA I Y++ K
Sbjct: 454 KVDEGTYQTSLEGVFAGGDAVTGPKIAIEAIAQGKNAARVIDSYLRGK 501
>gi|299535897|ref|ZP_07049217.1| dihydroorotate dehydrogenase 1B [Lysinibacillus fusiformis ZC1]
gi|298728649|gb|EFI69204.1| dihydroorotate dehydrogenase 1B [Lysinibacillus fusiformis ZC1]
Length = 303
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ T D++E++++ A ALELN+SCP+ + G+ G DP R +
Sbjct: 96 IIANVAGT-ETADYVEVARRISTASNVKALELNISCPN---VKCGGIQFGTDPATARELV 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V++ ++P +VKL+PN+TNI DIA A G ADG++ INT+ G+ G P A G
Sbjct: 152 KAVKAVSEVPVYVKLSPNVTNIVDIALAVEAGGADGITMINTLVGMRLDERTGKPVIANG 211
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T GG+SG A +P+ ++ V + K N PI+G+GG+ A + F+ AGA AV +
Sbjct: 212 T------GGLSGPAVKPVAIRMVYEVYKAV-NIPIIGMGGVTEAQDVIDFMSAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|167749805|ref|ZP_02421932.1| hypothetical protein EUBSIR_00773 [Eubacterium siraeum DSM 15702]
gi|167657288|gb|EDS01418.1| glutamate synthase (NADPH), homotetrameric [Eubacterium siraeum DSM
15702]
Length = 462
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 22/291 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EVE ++DLGV+++ + R +++++L + GY AIFIG G
Sbjct: 183 IPEFRLPKAIVKKEVENLQDLGVEVKTNMVIG-RVLSVDELFEMGYKAIFIGSGAG---- 237
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F G+ E +G Y++ +L R T+ K PI+K +V V+G G+ A
Sbjct: 238 LPSFMGIEGEDLIGVYSANEYLTR--TNLMKAYL---DDYDTPIIKSKSVAVVGGGNVAM 292
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A A R GA V +V+R+G + A EEV A EE F +PV++ V+
Sbjct: 293 DAARCAKRLGAENVYIVYRRGMEEMPARKEEVHHAMEEGIIFKNLNNPVKILGDENGRVR 352
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ + + + + + E +L + +I + G++ N ++ + P + +K
Sbjct: 353 AMECIEMELGEPDASGRRKPIAKEGSNFELPVDTVIMSIGTS--PNPLIRSTTPGLDTNK 410
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
G VN TM T+ GV+ GGD + T + ++ GK AA I +Y+ +
Sbjct: 411 RGCLVVNEDTMQTTREGVYAGGDAVTGAATVILAMGAGKQAAQSIDEYLSK 461
>gi|291556312|emb|CBL33429.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Eubacterium
siraeum V10Sc8a]
Length = 452
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 22/291 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EVE ++DLGV+++ + R +++++L + GY AIFIG G
Sbjct: 173 IPEFRLPKAIVKKEVENLQDLGVEVKTNMVIG-RVLSVDELFEMGYKAIFIGSGAG---- 227
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P F G+ E +G Y++ +L R T+ K PI+K +V V+G G+ A
Sbjct: 228 LPSFMGIEGEDLIGVYSANEYLTR--TNLMKAYL---DDYDTPIIKSKSVAVIGGGNVAM 282
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVK 214
D A A R GA V +V+R+G + A EEV A EE F +PV++ V+
Sbjct: 283 DAARCAKRLGAENVYIVYRRGMEEMPARKEEVHHAMEEGIIFKNLNNPVKILGDENGRVR 342
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
+ M+ + + + + + E +L + +I + G++ N ++ + P + +K
Sbjct: 343 AMECIEMELGEPDASGRRKPIAKEGSNFELPVDTVIMSIGTS--PNPLIRSTTPGLDTNK 400
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
G VN TM T+ GV+ GGD + T + ++ GK AA I +Y+ +
Sbjct: 401 RGCLVVNEDTMQTTREGVYAGGDAVTGAATVILAMGAGKQAAQSIDEYLSK 451
>gi|424738837|ref|ZP_18167266.1| dihydroorotate dehydrogenase 1B [Lysinibacillus fusiformis ZB2]
gi|422947321|gb|EKU41718.1| dihydroorotate dehydrogenase 1B [Lysinibacillus fusiformis ZB2]
Length = 303
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ T D ++E++++ A ALELN+SCP+ + G+ G DP R +
Sbjct: 96 IIANVAGTETAD-YVEVARRISTASNVKALELNISCPN---VKCGGIQFGTDPATARELV 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V++ ++P +VKL+PN+TNI DIA A G ADG++ INT+ G+ G P A G
Sbjct: 152 KAVKAVSEVPVYVKLSPNVTNIVDIALAVEAGGADGITMINTLVGMRLDERTGKPVIANG 211
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T GG+SG A +P+ ++ V + K N PI+G+GG+ A + F+ AGA AV +
Sbjct: 212 T------GGLSGPAVKPVAIRMVYEVYKAV-NIPIIGMGGVTEAQDVIDFMSAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>gi|283795658|ref|ZP_06344811.1| dihydroorotate oxidase [Clostridium sp. M62/1]
gi|291077330|gb|EFE14694.1| dihydroorotate oxidase [Clostridium sp. M62/1]
Length = 300
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 122/205 (59%), Gaps = 13/205 (6%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +D++++ +K D LE+N+SCP+ + G+A GQDP+ V I+ V+
Sbjct: 99 VCGKTTEDYIDVVEKLSDQPVDMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKRH 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT +AKAA G AD +S INT++G M + + AV K
Sbjct: 156 AKQPVIMKLSPNVTDITVMAKAAEAGGADVLSLINTITG-MKIDIHRRTF-AVANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
GG+SG A +P+ ++ V +A + P++G+GGI AD A++F+ AGA AV + +A +
Sbjct: 211 -GGLSGPAIKPVAVRMVYQVANAV-SLPVIGMGGIMCADDAIEFMMAGATAVAVGTANFH 268
Query: 751 QDFTVVDDYITGLQTLLYLKSTQLK 775
+ V ++ + G++ Y++ Q++
Sbjct: 269 NPY-VTEEIVKGIEA--YMRQYQVE 290
>gi|91201891|emb|CAJ74951.1| similar to dihydroorotate oxidase (dihydroorotate dehydrogenase B)
catalytic subunit [Candidatus Kuenenia stuttgartiensis]
Length = 306
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 11/191 (5%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQD-PEMVRNIS 624
+IASI+ T DD++E+++ +G A+E+ LSCPH G GL GQ P+ I+
Sbjct: 97 VIASIIGTCT-DDFIEVAEGLSASGFSAIEIPLSCPH---TPGFGLLSGQGTPKATYEIT 152
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
VR +P FVK++PN+ IT IAKAA + A+G++A+N++ M ++ + + P +G
Sbjct: 153 YAVRRKTNVPIFVKISPNVPEITSIAKAAEDAGANGITAVNSMGPGMVINIE-SKKPVLG 211
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
K GGV+G+A RP+ ++ V + + PI+G+GGI + A++ + AGA AV I
Sbjct: 212 FK----VGGVTGDALRPIAVRCVYDVYQAV-KIPIIGVGGISTGRHAIEMMMAGASAVGI 266
Query: 745 CSAVQNQDFTV 755
+ V + V
Sbjct: 267 GTGVYTRGINV 277
>gi|332686641|ref|YP_004456415.1| dihydroorotate dehydrogenase, catalytic subunit [Melissococcus
plutonius ATCC 35311]
gi|332370650|dbj|BAK21606.1| dihydroorotate dehydrogenase, catalytic subunit [Melissococcus
plutonius ATCC 35311]
Length = 308
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 110/189 (58%), Gaps = 23/189 (12%)
Query: 576 KDDWLEL-SKKTEKAGADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSV 631
++D++E+ SK ++ A+ELN+SCP HG G+A G DPE+ ++ V+
Sbjct: 106 EEDYIEVCSKISQVKNVHAIELNISCPNVKHG------GIAFGTDPEVAFQLTQVVKKVS 159
Query: 632 KIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTY 691
++P +VKL+PN+T+I IAKA G ADG+S INT+ G+ P A T
Sbjct: 160 QVPIYVKLSPNVTDIVPIAKAIEAGGADGLSMINTLLGMRIDLKTRQPVLANQT------ 213
Query: 692 GGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751
GG+SG A +P+ ++ + +A + N PI+G+GGI S + L+F AGA AV I +A
Sbjct: 214 GGLSGAAIKPVAIRLIRQVAAIT-NLPIIGMGGIQSVEDILEFFMAGASAVAIGTA---- 268
Query: 752 DFTVVDDYI 760
+FT D YI
Sbjct: 269 NFT--DPYI 275
>gi|158520334|ref|YP_001528204.1| glutamate synthase (NADPH), homotetrameric [Desulfococcus
oleovorans Hxd3]
gi|158509160|gb|ABW66127.1| glutamate synthase (NADPH), homotetrameric [Desulfococcus
oleovorans Hxd3]
Length = 469
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 148/289 (51%), Gaps = 21/289 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V EV+ ++ LG K+E + R +T+++L + GY A+F+G+G
Sbjct: 188 IPEFRLPKEIVFSEVDGLETLGGKVETNVVVG-RSVTVDELFEQGYDAVFLGVGAG---- 242
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P+F + E G +++ +L R + P+++G V+ +G G+ A
Sbjct: 243 LPMFLNVPGENFAGVFSANEYLTRTNLMKAYRF----PEYDTPVIRGKNVVTVGGGNVAM 298
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
D A +ALR GA +V+R+ T + A EV A EE +F +P Q DN ++
Sbjct: 299 DAARTALRLGAENSYIVYRRSKTELPARAAEVHHAEEEGVQFKLLTNPTQFFGDDNGRVI 358
Query: 220 GMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLDK 273
GM+ + E E + VE + ++ + +I A G+ N +L ++ + ++L+K
Sbjct: 359 GMEALQMELGEPDASGRRRPVEIKGSEFRIDCDLVIIAIGAGA--NPLLTQSTEGLELNK 416
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+GY + T T+ GV+ GGD S T + ++ G+ AA IH Y+
Sbjct: 417 WGYVVADEKTGKTTRKGVWAGGDIVTGSATVILAMGAGRVAADSIHDYL 465
>gi|288561242|ref|YP_003424728.1| dihydroorotate dehydrogenase PyrD [Methanobrevibacter ruminantium
M1]
gi|288543952|gb|ADC47836.1| dihydroorotate dehydrogenase PyrD [Methanobrevibacter ruminantium
M1]
Length = 278
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 13/186 (6%)
Query: 569 SIMCTYNK--DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLW 626
SI Y D++ ++ K E D +E+N+SCPH M G G + GQ+P++ R
Sbjct: 93 SIASIYGATPDEFSYVAGKIESL-VDMIEMNISCPHAM--EGYGASIGQNPDLTREFVSA 149
Query: 627 VRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLS-ADGNPWPAVGT 685
V+ +V +P KLTPN+TNI++IA AA EG ADG++ IN++ M + GNP A
Sbjct: 150 VKDTVSVPVLAKLTPNVTNISEIAIAAEEGGADGLTLINSLGPGMKIDIITGNPILA--- 206
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+GG+SG A +P+ ++ V A + PI+G+GGI + ++F+ AGA AVQI
Sbjct: 207 ---NKFGGMSGPAIKPIAVRCVYD-AYEATDIPIVGVGGIRNYTDVVEFLYAGASAVQIG 262
Query: 746 SAVQNQ 751
+++ +
Sbjct: 263 TSIMYE 268
>gi|224370172|ref|YP_002604336.1| protein HdrL3 [Desulfobacterium autotrophicum HRM2]
gi|223692889|gb|ACN16172.1| HdrL3 [Desulfobacterium autotrophicum HRM2]
Length = 1487
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 22/299 (7%)
Query: 34 PVAALPDSSEIPQYRLPFDAVNFEV-ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAI 92
PVA IP YRLP + EV + LGV I+ ++L RD T++ L +DG+ ++
Sbjct: 285 PVAGGMLKVGIPDYRLPPRVLEDEVFYITGHLGVDIQYNKALG-RDFTVDSLFEDGFASV 343
Query: 93 FIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIV 152
++ +G + I ++ G + FL VA G CK+ L G V++
Sbjct: 344 YLALGCHKGMELGIPGEASD--GVISGVKFLKAVAL-------GTCKR-----LTGKVVI 389
Query: 153 LGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD 212
+G GD A D A +ALR GA+KV V++R+ + A EE++ A EE + +P +V
Sbjct: 390 IGGGDVAIDAARTALRMGADKVSVLYRRTKIEMPAWDEEIEDALEEGVDIQFLTAPKEVV 449
Query: 213 VKDNKIAGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIK 267
D K G++ R E E + V E + +YII+A G D ++ +
Sbjct: 450 ATDGKTIGIRCLRMELGEPDNSGRRRPVPVEGSDFVIDTDYIITAIGQR-TDTSCMDEKQ 508
Query: 268 PVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V ++++G EV+ T T GVF GGD + + +V G A I +++ +++
Sbjct: 509 GVTINRWGNIEVDPITFETRRKGVFAGGDAETGASIAINAVAAGNEAGVSILRFLDDQD 567
>gi|407977659|ref|ZP_11158496.1| dihydroorotate dehydrogenase 1B [Bacillus sp. HYC-10]
gi|407415912|gb|EKF37493.1| dihydroorotate dehydrogenase 1B [Bacillus sp. HYC-10]
Length = 310
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
DD++E++K +A ALELN+SCP+ + G+A G DP+M +++ V+ +P
Sbjct: 104 DDYVEVAKHISQARNVHALELNISCPN---VKTGGIAFGTDPKMAASLTKAVKEVSSVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IAKA ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIAKAIESAGADGLTMINTLIGMRLDLKTGKPILANQT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ + PI+G+GG+ SA+ L+F+ AGA AV + +A
Sbjct: 215 GPAIKPVAVRMVHEVSQAV-SIPIIGMGGVQSAEDVLEFLLAGASAVAVGTA 265
>gi|289450712|ref|YP_003475036.1| dihydroorotate oxidase catalytic subunit [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289185259|gb|ADC91684.1| dihydroorotate oxidase, catalytic subunit [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 316
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 118/195 (60%), Gaps = 12/195 (6%)
Query: 575 NKDDWLELSKK-TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
++ ++L+++ + +E G ALE+N+SCP+ + G+ GQDP MV ++ +++ K
Sbjct: 115 SESEYLQVAAEMSECPGVGALEVNISCPN---VKQGGITFGQDPAMVERLTSKIKTVSKC 171
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P ++KL+PN+T+IT +AKAA G ADG+S INT+ G+ G P A GT GG
Sbjct: 172 PVYMKLSPNVTDITVLAKAAEAGGADGLSLINTLLGMRLDLKTGKPVLANGT------GG 225
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF 753
+SG A +P+ ++ + + + P++G+GG+ +A+ AL+ + AGA AV + +A F
Sbjct: 226 LSGPAIKPVAVRMIYQVYRAV-KIPLIGMGGVMTAEDALEMMYAGAGAVAVGTANFVNPF 284
Query: 754 TVVDDYITGLQTLLY 768
V + I GL LL+
Sbjct: 285 -VCPEIIAGLAELLH 298
>gi|371777588|ref|ZP_09483910.1| NADPH-dependent glutamate synthase [Anaerophaga sp. HS1]
Length = 497
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 24/283 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V+ E+E +K LGVK E + + TIE+L+++G+ F+G G
Sbjct: 211 IPEFRLPNNIVDVEIESLKKLGVKFETN-FIVGKTATIEELKQEGFEGFFVGSGAG---- 265
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKES-LPILKG-TVIVLGAGDTA 159
+P F G+ E +G +S +L RV L K++S PILKG V V+G G+TA
Sbjct: 266 LPRFMGIPGENLVGILSSNEYLTRV------NLMEANKEDSDTPILKGKRVAVIGGGNTA 319
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
D +ALR GA K ++++R+ + A EE++ A EE EFL +P++ + DNK
Sbjct: 320 MDSVRTALRLGAEKAMIIYRRSEEEMPARVEEIKHAKEEGVEFLTLQNPIEY-LGDNKGY 378
Query: 220 GMQFNRTEQNEKGEWVEDEEQR-IKLKAN-YIISAFGSTLLDNDVLEAIKP-----VKLD 272
Q R ++ + GE +R I ++ + Y++ + + P +K
Sbjct: 379 VRQI-RVQRMKLGEPDASGRRRPIPVEGDEYLLDVDTVVVSVGVAPNPLIPQSMPDLKTT 437
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA 315
+ EV+ ++ TSVP +F GGD T + ++ DG+ AA
Sbjct: 438 SWRTLEVDQESLQTSVPFMFAGGDIVRGGATVILAMGDGRKAA 480
>gi|312978330|ref|ZP_07790073.1| dihydroorotate oxidase [Lactobacillus crispatus CTV-05]
gi|310894849|gb|EFQ43920.1| dihydroorotate oxidase [Lactobacillus crispatus CTV-05]
Length = 307
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 110/171 (64%), Gaps = 11/171 (6%)
Query: 578 DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D++E+++K +G +ALE+N+SCP+ + + GM D +V ++ +++ V IP +
Sbjct: 110 DYVEVAQKLSNSGLVNALEINVSCPN-VAQGGMSFGVHAD--VVEELTRKIKAVVNIPIY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKLTPN+T+IT IAKAA +G ADG+S INT+ G M + P +G GG+SG
Sbjct: 167 VKLTPNVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKR-RPLLG----HNMGGLSG 220
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
A +P+ ++ +S + + + PI+G+GGI SA+ ++F+ AGA+AV + +A
Sbjct: 221 EAVKPIAIRMISQV-RQITSLPIIGMGGIASAEDVVEFMLAGANAVAVGTA 270
>gi|189485314|ref|YP_001956255.1| glutamate synthase small subunit [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287273|dbj|BAG13794.1| glutamate synthase small subunit [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 456
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 23/292 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + ++ E+ +K LG+KI +L R T+++L + Y AIFI +G
Sbjct: 178 IPEFRLPKEVLDKEINNLKKLGMKI-ILNTLIGRTRTVKELFNESYKAIFISVGAG---- 232
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P+F G+ E Y S FL RV P+ +G V+V+G G+TA
Sbjct: 233 LPVFPGIEGENLNHVYCSNEFLVRVNLMRSFDF----PNYDTPVYRGKNVVVIGGGNTAM 288
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD------VK 214
D A +ALR GA V +++R+ + A EE A +E EF+ +PV+ VK
Sbjct: 289 DSARTALRLGAESVKLIYRRTEKEMPAREEERLHARKEGIEFIVLTNPVKFIGDEKKFVK 348
Query: 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI-KPVKLDK 273
+ M+ + + + E +E ++ + +I A G L N VL + + + D+
Sbjct: 349 AVECIKMELGDYDDSGRRHPQEIKESNYAIETDMVILALG--LHPNPVLTLLTEGLNTDR 406
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+GY ++ M TSVPGVF GGD DT +E++ GK AA I Y+ +K
Sbjct: 407 HGYIIIDDNYM-TSVPGVFAGGDIVG-GDTVIEAMGMGKKAARSIACYLNQK 456
>gi|332159197|ref|YP_004424476.1| putative oxidoreductase [Pyrococcus sp. NA2]
gi|331034660|gb|AEC52472.1| putative oxidoreductase [Pyrococcus sp. NA2]
Length = 475
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 19/291 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + V E+ +K+LGVKIE L + IT E+LRK+ Y AIFIG G +
Sbjct: 197 IPEFRLPKEIVKKELAKLKELGVKIETN-VLVGKTITFEELRKE-YDAIFIGTGAGTPRI 254
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
P + G+ G Y++ FL RV + P+ G V V+G G+TA D
Sbjct: 255 FP-WPGVNLN-GIYSANEFLTRVNLMKAYKF----PEYDTPVKVGKRVAVIGGGNTAMDA 308
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DVKDN 216
A SALR GA +V +++R+ + A EE++ A EE +F+ +SP + ++K
Sbjct: 309 ARSALRLGA-EVWILYRRTRKEMTAREEEIKHAEEEGVKFMFLVSPKRFIGDENGNLKAI 367
Query: 217 KIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
++ M+ +++ + + E I ++ + +I A G T + L+ + +K+DK G
Sbjct: 368 ELEKMKLGEPDESGRRRPIPTGETFI-MEFDTVIIAIGQTP-NKTFLQTVPELKVDKKGR 425
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +KNN
Sbjct: 426 IIVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYLTKKNN 475
>gi|429761551|ref|ZP_19293975.1| dihydroorotate oxidase, catalytic subunit [Anaerostipes hadrus DSM
3319]
gi|429183545|gb|EKY24591.1| dihydroorotate oxidase, catalytic subunit [Anaerostipes hadrus DSM
3319]
Length = 300
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C ++ D+LE+ ++ D LE+N+SCP+ + G+A GQDP+ + +I+ V++
Sbjct: 99 VCGKSEKDYLEVVERLADQPVDLLEINVSCPN---VKEGGIAFGQDPKALYDITKAVKAK 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT++AKAA + +D +S INT++G M + + + + K
Sbjct: 156 AKQPIIMKLSPNVTDITEMAKAAVDAGSDALSLINTLTG-MKIDIERRDF-VLANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ ++ V +A + PI+G+GGI +A+ AL+FI AGA AV + +A
Sbjct: 211 -GGMSGPAIKPVAVRMVYQVANAV-DVPIIGMGGISTAEDALEFIMAGATAVSVGTA 265
>gi|422933419|ref|ZP_16966339.1| dihydroorotate oxidase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339891673|gb|EGQ80626.1| dihydroorotate oxidase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 304
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 118/212 (55%), Gaps = 30/212 (14%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 DDYVYVADKISKSPNVKALELNISCPNVKHG------GMQFGTDPNVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVESGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTA---- 268
Query: 752 DFT-------VVDDYITGLQTLLYLKSTQLKG 776
+FT ++D+ T L L LKG
Sbjct: 269 NFTDPLVCPKIIDNLETALNKLGVNHILDLKG 300
>gi|225390348|ref|ZP_03760072.1| hypothetical protein CLOSTASPAR_04101 [Clostridium asparagiforme
DSM 15981]
gi|225043592|gb|EEG53838.1| hypothetical protein CLOSTASPAR_04101 [Clostridium asparagiforme
DSM 15981]
Length = 309
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 123/207 (59%), Gaps = 18/207 (8%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +D++++ ++ D LE+N+SCP+ + G+A GQDP+ V I+ V++
Sbjct: 108 VCGKTTEDYIDVVERLGDQPVDLLEINISCPN---VKEGGIAFGQDPKAVEAITKAVKAH 164
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT +A+AA EG AD +S INT++G M + + + A+ +
Sbjct: 165 AKQPIIMKLSPNVTDITVMARAAEEGGADAISLINTLTG-MKIDVNRRTF-ALANRT--- 219
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
GG+SG A +P+ ++ V +A+ P++G+GGI +A+ AL+FI AGA AV I +A +
Sbjct: 220 -GGLSGPAIKPVAVRMVYQVAQTV-RVPVIGMGGICNAEDALEFILAGAAAVAIGTANFH 277
Query: 751 QDFTVVD------DYIT--GLQTLLYL 769
+ V+ DY+ G+Q + L
Sbjct: 278 NPYATVETVDGIRDYMVKNGIQDIREL 304
>gi|154483491|ref|ZP_02025939.1| hypothetical protein EUBVEN_01195 [Eubacterium ventriosum ATCC
27560]
gi|149735743|gb|EDM51629.1| dihydroorotate dehydrogenase 1B [Eubacterium ventriosum ATCC 27560]
Length = 300
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 16/190 (8%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWV 627
+C +D++++ +K D LE+N+SCP HG G+A GQDP+ V I+ V
Sbjct: 99 VCGRTTEDYIDVVEKLGHEKVDMLEINISCPNVKHG------GIAFGQDPKAVEAITKAV 152
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
++ K P +KL+PN+T+IT++AKAA G AD +S INT++G M + + + + K
Sbjct: 153 KAVAKQPVIMKLSPNVTDITEMAKAAEAGGADALSLINTLTG-MQIDVERQKF-VLANKT 210
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ ++ V +A PI+G+GGI +A A++FI AGA AV + +A
Sbjct: 211 ----GGLSGPAIKPVAVRMVYQVANAV-KVPIIGMGGIANASDAMEFILAGATAVSVGTA 265
Query: 748 VQNQDFTVVD 757
N T ++
Sbjct: 266 NFNNPNTTIE 275
>gi|52080156|ref|YP_078947.1| dihydroorotate dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52003367|gb|AAU23309.1| dihydroorotate dehydrogenase (catalytic subunit) [Bacillus
licheniformis DSM 13 = ATCC 14580]
Length = 311
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 14/196 (7%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E++++ KA ALELN+SCP+ + G+A G PEM ++ V+ +P
Sbjct: 104 EDYVEVAEEISKAPNVHALELNISCPN---VKTGGIAFGTQPEMAGELTKAVKEVASVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NITDIA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITDIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT- 754
G A +P+ ++ V +++ + PI+G+GG+ SA+ L+F+ AGA AV + +A F
Sbjct: 215 GPAVKPVAIRMVHEVSQKV-SIPIIGMGGVQSAEDVLEFLLAGASAVAVGTANFVNPFAC 273
Query: 755 --VVDDYITGLQTLLY 768
++DD L+ Y
Sbjct: 274 PDIIDDLPRVLEKYGY 289
>gi|423318363|ref|ZP_17296240.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB049-03]
gi|423322062|ref|ZP_17299933.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB077-07]
gi|405591516|gb|EKB65018.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB077-07]
gi|405596087|gb|EKB69444.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB049-03]
Length = 307
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 110/171 (64%), Gaps = 11/171 (6%)
Query: 578 DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D++E+++K +G +ALE+N+SCP+ + + GM D +V ++ +++ V IP +
Sbjct: 110 DYVEVAQKLSNSGLVNALEINVSCPN-VAQGGMSFGVHAD--VVEELTRKIKAVVNIPIY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKLTPN+T+IT IAKAA +G ADG+S INT+ G M + P +G GG+SG
Sbjct: 167 VKLTPNVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKR-RPLLG----HNMGGLSG 220
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
A +P+ ++ +S + + + PI+G+GGI SA+ ++F+ AGA+AV + +A
Sbjct: 221 EAVKPIAIRMISQV-RQITSLPIIGMGGIASAEDVVEFMLAGANAVAVGTA 270
>gi|167766247|ref|ZP_02438300.1| hypothetical protein CLOSS21_00750 [Clostridium sp. SS2/1]
gi|317497599|ref|ZP_07955917.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712074|gb|EDS22653.1| dihydroorotate dehydrogenase 1B [Clostridium sp. SS2/1]
gi|291559871|emb|CBL38671.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[butyrate-producing bacterium SSC/2]
gi|316895158|gb|EFV17322.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 300
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C ++ D+LE+ ++ D LE+N+SCP+ + G+A GQDP+ + +I+ V++
Sbjct: 99 VCGKSEKDYLEVVERLADQPVDLLEINVSCPN---VKEGGIAFGQDPKALYDITKAVKAK 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT++AKAA + +D +S INT++G M + + + + K
Sbjct: 156 AKQPIIMKLSPNVTDITEMAKAAVDAGSDALSLINTLTG-MKIDIERRDF-VLANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ ++ V +A + PI+G+GGI +A+ AL+FI AGA AV + +A
Sbjct: 211 -GGMSGPAIKPVAVRMVYQVANAV-DVPIIGMGGISTAEDALEFIMAGATAVSVGTA 265
>gi|308275187|emb|CBX31784.1| hypothetical protein N47_N26090 [uncultured Desulfobacterium sp.]
Length = 828
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 24/289 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E++ + DLGV + + +D T+ LR +GY AIF+ IG ++
Sbjct: 236 IPEYRLPKAMLDQEIQEILDLGVNVNTNKKFG-KDFTLASLRSEGYDAIFLAIGAWSSYK 294
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+ I E G + FL R A+ P + V+V+G G+T D A
Sbjct: 295 LGI--SGEEISGVMPAIEFLIRNASGDP------------PPVGKKVVVIGNGNTGMDAA 340
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
S LR GA +V++++R+ + A P+E+ A EE + +P ++ K+ +G+++
Sbjct: 341 RSCLRMGAQEVIMLYRRTKAEMPANPQEIHDAEEEGIKIHILATPTRIISKEGVFSGVEY 400
Query: 224 NRTE-----QNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEA---IKPVKLDKYG 275
+ E + + V E L+A+ I + G D D + +K K G
Sbjct: 401 LKNELKAADSSGRPRPVPIEGSETILEADQAIVSIGQ-FSDVDFFKQETELKDAAFTKKG 459
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
PE + T + +P +F GGD T +++ DG+ AA +HKY+ +
Sbjct: 460 IPETDINTFQSCIPYLFLGGDLLRGPRTVIQASADGREAALSMHKYLTD 508
>gi|319646065|ref|ZP_08000295.1| PyrD protein [Bacillus sp. BT1B_CT2]
gi|404489044|ref|YP_006713150.1| dihydroorotate dehydrogenase 1B [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52348035|gb|AAU40669.1| dihydroorotate dehydrogenase catalytic subunit PyrD [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317391815|gb|EFV72612.1| PyrD protein [Bacillus sp. BT1B_CT2]
Length = 312
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 14/196 (7%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E++++ KA ALELN+SCP+ + G+A G PEM ++ V+ +P
Sbjct: 105 EDYVEVAEEISKAPNVHALELNISCPN---VKTGGIAFGTQPEMAGELTKAVKEVASVPV 161
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NITDIA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 162 YVKLSPNVANITDIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 215
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT- 754
G A +P+ ++ V +++ + PI+G+GG+ SA+ L+F+ AGA AV + +A F
Sbjct: 216 GPAVKPVAIRMVHEVSQKV-SIPIIGMGGVQSAEDVLEFLLAGASAVAVGTANFVNPFAC 274
Query: 755 --VVDDYITGLQTLLY 768
++DD L+ Y
Sbjct: 275 PDIIDDLPRVLEKYGY 290
>gi|355671701|ref|ZP_09057970.1| dihydroorotate dehydrogenase [Clostridium citroniae WAL-17108]
gi|354815500|gb|EHF00093.1| dihydroorotate dehydrogenase [Clostridium citroniae WAL-17108]
Length = 300
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 10/187 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +D++E+ ++ D LE+N+SCP+ + G+A GQDP+ V I+ V++
Sbjct: 99 VCGRTTEDYVEVVERLGDEPVDMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKAH 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT +AKAA G D VS INT++G M + + A+ +
Sbjct: 156 AKQPIIMKLSPNVTDITVMAKAAEAGGTDAVSLINTLTG-MKIDIHKRAF-ALANRT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
GG+SG A +P+ ++ V +A+ PI+G+GGI + D AL+FI AGA AV I +A +
Sbjct: 211 -GGLSGPAIKPVAVRMVYQVAQAV-KVPIIGMGGIRNGDDALEFILAGASAVAIGTANFH 268
Query: 751 QDFTVVD 757
+ V+
Sbjct: 269 NPYATVE 275
>gi|167769401|ref|ZP_02441454.1| hypothetical protein ANACOL_00731 [Anaerotruncus colihominis DSM
17241]
gi|167668369|gb|EDS12499.1| glutamate synthase (NADPH), homotetrameric [Anaerotruncus
colihominis DSM 17241]
Length = 462
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 148/295 (50%), Gaps = 27/295 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IPQ+RLP + V EV +K+LGV IE + D ++++L + GY A+FIG G
Sbjct: 183 IPQFRLPKEIVAREVGALKELGVDIETNMVIGKVD-SVDELFEQGYEAVFIGSGAG---- 237
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRV--ATSSKKGLCGGCKKESLPILKG-TVIVLGAGDT 158
+P F G+ E +G Y++ +L R+ + ++G PI K V V+G G+
Sbjct: 238 LPSFMGIEGEGLLGVYSANEYLTRINLMKAYREGY-------DTPIAKSKAVAVVGGGNV 290
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-K 217
A D A A R GA+ V +V+R+ + A EEV A EE F +PV++ +N
Sbjct: 291 AMDAARCAKRMGADTVYIVYRRSMQELPARAEEVHHAQEEGIVFKLLNNPVKIIGDENGH 350
Query: 218 IAG-----MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+ G M+ + + + + E L + +I + G++ N ++ + ++
Sbjct: 351 VTGIECIEMELGEPDASGRRRPIPKEGSNFVLDVDTVIMSIGTS--PNPLIRSTTTGLEA 408
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
+K+G V AT+ PGVF GGD + T + ++ GKTAA I +YI+ KN
Sbjct: 409 NKHGC-LVADEKGATTKPGVFAGGDAVTGAATVILAMGAGKTAAQSIDEYIRSKN 462
>gi|241889334|ref|ZP_04776635.1| dihydroorotate dehydrogenase [Gemella haemolysans ATCC 10379]
gi|241863877|gb|EER68258.1| dihydroorotate dehydrogenase [Gemella haemolysans ATCC 10379]
Length = 304
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ +++ KA ALELN+SCP HG G+ G DPE +N++ V+
Sbjct: 107 DDYVYVAEHISKAPNVHALELNISCPNVKHG------GIQFGTDPETAKNLTRKVKEVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+TNI +AKA EG ADG++ INT+ G+ G P A G
Sbjct: 161 VPVYVKLSPNVTNIVAMAKAVEEGGADGITMINTLVGVRLDKKTGKPIIA------NVTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSA 747
G+SG A +P+ ++ V +++ N PI+G+GGI D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVSQAV-NIPIIGMGGIMDEWDV-IDFISAGASAVAVGTA 268
>gi|224369308|ref|YP_002603472.1| protein HdrL1 [Desulfobacterium autotrophicum HRM2]
gi|223692025|gb|ACN15308.1| HdrL1 [Desulfobacterium autotrophicum HRM2]
Length = 1482
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 26/291 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKD-LGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNAN 102
IP YRLP + EV + + LGV+I+ ++L RD T++ L +G+ ++++ IG
Sbjct: 289 IPDYRLPPKVLEDEVSYITNQLGVEIQYNKALG-RDFTVDALFAEGFASVYLAIGCHRGM 347
Query: 103 VIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
+ G+ E G + T L A + K L KG V+++G GD A
Sbjct: 348 EL----GIPGEAFNGVISGVTLLKEAALGTGKPL------------KGKVVIIGGGDVAI 391
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
D A +ALR GA KV +++R+ T + A EE++ A EE + +P +V +D K G
Sbjct: 392 DAARTALRIGAEKVSILYRRTETEMPARDEEIEDALEEGVDIQFLTAPKEVVAEDGKTVG 451
Query: 221 MQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
++ R E E + V E + +YII A G D ++ + + ++++G
Sbjct: 452 IRCFRMELGEPDKSGRRRPVPVEGSDFIINTDYIIPAIGQR-TDTSCIDEKQGITINRWG 510
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
EVN T T GVF GGD + + +V G A I +++ ++
Sbjct: 511 NIEVNPLTFETQRKGVFAGGDAETGASIAINAVAAGNQAGVSILRFLDHED 561
>gi|39998148|ref|NP_954099.1| dihydropyrimidine dehydrogenase subunit A [Geobacter sulfurreducens
PCA]
gi|39985094|gb|AAR36449.1| NADH-dependent ferredoxin:NADP+ oxidoreductase, alpha subunit
[Geobacter sulfurreducens PCA]
Length = 470
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 27/294 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP ++ EV + LGV +EC + + +T+ +LR++ + A+FI N
Sbjct: 192 IPEFRLPKTIIDAEVARLLALGVTVECN-VIIGKTLTLAQLREE-FDAVFIA----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKK--ESLPILKG-TVIVLGAGDT 158
+P+ + E G Y++ +L RV L G + + PI+ G V V+G G+T
Sbjct: 246 LPVMLSIPGENLKGVYSANEYLTRV------NLMGAGRDPGSTTPIIAGKRVAVIGGGNT 299
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDV-KDNK 217
A DC +A R GA + ++++R+ + A EE++ A EE EF+ +P+ + KD
Sbjct: 300 AMDCVRTARRLGAERAMIIYRRSEEQMPARVEEIKHAKEEGVEFVMLTAPIAIGGDKDGW 359
Query: 218 IAGMQFNRTE-----QNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
+A ++ R E + + V E + + +++A G+ N +L A P +KL
Sbjct: 360 VATLRCLRMELGAPDSSGRRSPVPVEGSAYDIAVDVVVNAVGTRA--NPLLTATAPELKL 417
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+++G + ATSV GV+ GGD T + ++ DGK AA IH ++ +
Sbjct: 418 NRWGNIATD-DNGATSVAGVYAGGDIVRGGATVILAMGDGKQAAAAIHDWLNRR 470
>gi|389576343|ref|ZP_10166371.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
gi|389311828|gb|EIM56761.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
Length = 304
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 109/177 (61%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C ++++++LE+ + D LE+N+SCP+ + G+A G DP++ I+ V++
Sbjct: 103 VCGHSEEEYLEVVDRLADEPVDMLEINISCPN---VKEGGIAFGTDPKVAEQITKAVKTH 159
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT++A+A G AD +S INT++G + D N V K
Sbjct: 160 AKQPVIMKLSPNVTDITEMARAVEAGGADVISLINTLTG---MKIDVNRRKFVLANK--- 213
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ ++ V +A+ PI+G+GGI +A+ AL+FI AGA AV + +A
Sbjct: 214 TGGMSGPAVKPIAVRMVYQVAQAV-KVPIIGMGGIATAEDALEFILAGATAVSVGTA 269
>gi|347750581|ref|YP_004858146.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
36D1]
gi|347583099|gb|AEO99365.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
36D1]
Length = 396
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++ +S + KA ALELN+SCP+ + G+A G DPEM ++ V++ ++P
Sbjct: 196 EDYVYVSTRLSKAPNVHALELNISCPN---VKSGGIAFGTDPEMAFELTRQVKAVSEVPV 252
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+T+I IAKAA G ADG++ INT+ G+ P A T GG+S
Sbjct: 253 YVKLSPNVTDIVAIAKAAEAGGADGLTMINTLLGMKIDLKTARPLLANET------GGLS 306
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ + +++ + PI+G+GGI +A+ A++F+ AGA AV + +A
Sbjct: 307 GPAVKPVAVRMIYEVSREV-DIPIIGMGGIMTAEDAVEFLYAGASAVAVGTA 357
>gi|340752408|ref|ZP_08689207.1| dihydroorotate dehydrogenase [Fusobacterium sp. 2_1_31]
gi|229422206|gb|EEO37253.1| dihydroorotate dehydrogenase [Fusobacterium sp. 2_1_31]
Length = 304
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
+D++ ++ K KA ALELN+SCP HG G+ G DP++ RN++ V++
Sbjct: 107 EDYVYVADKISKAPNVKALELNISCPNVKHG------GIQFGTDPDVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEAGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ + L L LKG
Sbjct: 273 PFVCPKIIDNLESALDKLGINHILDLKG 300
>gi|379727349|ref|YP_005319534.1| dihydroorotate dehydrogenase, catalytic subunit [Melissococcus
plutonius DAT561]
gi|376318252|dbj|BAL62039.1| dihydroorotate dehydrogenase, catalytic subunit [Melissococcus
plutonius DAT561]
Length = 308
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 23/189 (12%)
Query: 576 KDDWLEL-SKKTEKAGADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSV 631
++D++E+ SK ++ A+ELN+SCP HG G+A G DPE+ ++ V+
Sbjct: 106 EEDYIEVCSKISQVKNVHAIELNISCPNVKHG------GIAFGTDPEVAFQLTQAVKKVS 159
Query: 632 KIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTY 691
++P +VKL+PN+T+I IAKA G ADG S INT+ G+ P A T
Sbjct: 160 QVPIYVKLSPNVTDIVPIAKAIEAGGADGFSMINTLLGMRIDLKTRQPVLANQT------ 213
Query: 692 GGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751
GG+SG A +P+ ++ + +A + N PI+G+GGI S + L+F AGA AV I +A
Sbjct: 214 GGLSGAAIKPVAIRLIRQVAAIT-NLPIIGMGGIQSVEDILEFFMAGASAVAIGTA---- 268
Query: 752 DFTVVDDYI 760
+FT D YI
Sbjct: 269 NFT--DPYI 275
>gi|227878925|ref|ZP_03996828.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus JV-V01]
gi|256843503|ref|ZP_05548991.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus 125-2-CHN]
gi|256849737|ref|ZP_05555168.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-1A-US]
gi|262046689|ref|ZP_06019650.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-3A-US]
gi|293380101|ref|ZP_06626190.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus 214-1]
gi|227861471|gb|EEJ69087.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus JV-V01]
gi|256614923|gb|EEU20124.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus 125-2-CHN]
gi|256713226|gb|EEU28216.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-1A-US]
gi|260573138|gb|EEX29697.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-3A-US]
gi|290923314|gb|EFE00228.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus 214-1]
Length = 307
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 110/171 (64%), Gaps = 11/171 (6%)
Query: 578 DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D++E+++K +G +ALE+N+SCP+ + + GM D +V ++ +++ V IP +
Sbjct: 110 DYVEVAQKLSNSGLVNALEINVSCPN-VAQGGMSFGVHAD--VVEELTRKIKAVVNIPIY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKLTPN+T+IT IAKAA +G ADG+S INT+ G M + P +G GG+SG
Sbjct: 167 VKLTPNVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKR-RPLLG----HNMGGLSG 220
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
A +P+ ++ +S + + + PI+G+GGI SA+ ++F+ AGA+AV + +A
Sbjct: 221 EAVKPIAIRMISQV-RQITSLPIIGMGGIASAEDVVEFMLAGANAVAVGTA 270
>gi|301299460|ref|ZP_07205736.1| dihydroorotate dehydrogenase 1B [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852942|gb|EFK80550.1| dihydroorotate dehydrogenase 1B [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 314
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 576 KDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
+DD++E++ K ++G +ALELN+SCP+ + E GM A G PE+ ++ V+ +P
Sbjct: 110 EDDYVEVATKLSQSGMVNALELNISCPN-VHEGGM--AFGTVPEVAERLTKKVKEVSTVP 166
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+T+I IAKA G ADG+S INTV G+ A G P GG+
Sbjct: 167 VYVKLSPNVTDIVAIAKAVERGGADGISMINTVLGMHIDVASGKPVLG------NIMGGL 220
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG A + + ++ + +A+ + PI+G+GG+++ D L+ AGA AV + +A
Sbjct: 221 SGKAVKAIAIRMIYQVAQ-NTDLPIIGMGGVETVDDVLEMYMAGASAVAVGTA 272
>gi|238917222|ref|YP_002930739.1| glutamate synthase (NADPH) [Eubacterium eligens ATCC 27750]
gi|238872582|gb|ACR72292.1| glutamate synthase (NADPH) [Eubacterium eligens ATCC 27750]
Length = 922
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 156/320 (48%), Gaps = 39/320 (12%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP + + + V E+++++ +GV+I+C + +DITI +LR+ GY A ++ IG
Sbjct: 522 IPSFVMEKNIVQAEIDVLRAMGVEIKCGVEVG-KDITIAQLREQGYKAFYVAIG------ 574
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPI--------LKGTVIVLGA 155
QG G T VA KG+ G E L I L G +V+G
Sbjct: 575 ---CQG-----GRKTG------VAGEDAKGVMTGV--ELLHITTDDESYKLTGDTVVIGG 618
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKD 215
G+ A D + +A+RCG+ KV V + + A+PEE++ A E + P ++ +D
Sbjct: 619 GNVAIDVSRTAIRCGSPKVSQVSLETRDIMPALPEEIETAESEGINIIGGWGPKEILTED 678
Query: 216 NKIAGMQFNR--TEQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271
K+ G+ F + + ++ G + DE + + ++ + +I + G T+ ++LE K V+
Sbjct: 679 GKVTGIVFKKCTSVKDADGRFNPQYDENETMTIECSNVIMSVGQTIELGNLLEGTK-VEF 737
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVP 331
YP + T T+ P +F GGD ++++ GK A IH+Y+Q ++LT+
Sbjct: 738 WHGNYPVADKVTYQTAEPDIFVGGDVYTGPKFAIDAIAAGKQGAISIHRYVQPHSSLTIG 797
Query: 332 DKPCLPKFMSHIDLVDISVE 351
P + +D D SVE
Sbjct: 798 RD---PNYYVELDKDDYSVE 814
>gi|18978282|ref|NP_579639.1| oxidoreductase [Pyrococcus furiosus DSM 3638]
gi|397652441|ref|YP_006493022.1| oxidoreductase [Pyrococcus furiosus COM1]
gi|18894105|gb|AAL82034.1| glutamate synthase [Pyrococcus furiosus DSM 3638]
gi|393190032|gb|AFN04730.1| oxidoreductase [Pyrococcus furiosus COM1]
Length = 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP + + E++ + LGV+I+ + + + ITI++L ++ Y A+FIG G
Sbjct: 197 IPEFRLPKEILRKELKKLSLLGVEIKTD-HIVGKTITIQELLQE-YDAVFIGTGAGTPK- 253
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCA 163
+P G+ G Y++ FL R+ + ++ ++ V+V+GAG+TA D A
Sbjct: 254 LPNIPGINLN-GIYSANEFLTRINLMKAYKFP---EYDTPIVVGKKVVVIGAGNTAMDAA 309
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGMQ 222
SALR GA +V + +R+G ++ A EEV+ A EE +F+ F++PV+ + ++ + ++
Sbjct: 310 RSALRLGA-EVTIAYRRGREDMTARIEEVKHAEEEGVKFMFFVNPVEFIGDENGNVKAVK 368
Query: 223 FNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKYGY 276
F + E++ +G+ + + I ++A+ +I A G T N VL P +K+D++G
Sbjct: 369 FEKMKPLEERDSRGKRKIVGTGEYITVEADTVIIAIGQT--PNKVLWRATPELKVDEWGR 426
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +K N
Sbjct: 427 IVVDENLM-TSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHQYLSKKGN 476
>gi|308160401|gb|EFO62893.1| Glutamate synthase [Giardia lamblia P15]
Length = 910
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 38/304 (12%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIG--IGKPNA 101
IP++RLP V E+ VK LG+ +++ +D+TI +LR +GYTAIFIG +G P +
Sbjct: 577 IPKFRLPKQIVAHEINSVKRLGLVDIKTKTVVGKDVTISQLRSEGYTAIFIGTGVGIPRS 636
Query: 102 NVIPIFQGLTEEM-GFYTSKTFLPRVATSSKKGLCGGCKKES---LPIL--------KGT 149
IP E++ G +T+ FL R C E P + +
Sbjct: 637 LGIP-----GEDLPGVFTANEFLKR------------CNLEDDCVFPFISRVDSNEPRKK 679
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPV 209
V+V+G G+ A DCA+SA R GA+ V+VV+R+ + A EE++ A E F SP+
Sbjct: 680 VVVIGCGNVAMDCASSARRLGAD-VVVVYRRRLQDSPARLEEIESAEAEGVYFATLNSPL 738
Query: 210 QVDVKDNKIAGMQFNRTEQN--EKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIK 267
++ D + G++ R + N E G V + + + +I A G +N +++ +
Sbjct: 739 EIVPNDTR-TGIKGLRCQVNSFEAGTIVPLDGEFSFFACSMVIVAVGFGP-NNIIVKTTE 796
Query: 268 PVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
+K+ G N TSVPGVFC GD + T ++++ +GK A ++ +I + N+
Sbjct: 797 NLKITDKGLVVTN-ENFETSVPGVFCAGDVQTGAATVIKALGNGKVAGQSMNFWIAQ-NH 854
Query: 328 LTVP 331
T+P
Sbjct: 855 TTLP 858
>gi|193215569|ref|YP_001996768.1| oxidoreductase [Chloroherpeton thalassium ATCC 35110]
gi|193089046|gb|ACF14321.1| glutamate synthase (NADPH), homotetrameric [Chloroherpeton
thalassium ATCC 35110]
Length = 482
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 147/303 (48%), Gaps = 34/303 (11%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKL-RKDGYTAIFIGIGKPNAN 102
IP++RLP V E++ +K LGVK + + R +TI++L +DG+ A+FIG+G
Sbjct: 195 IPEFRLPKQIVREEIDNLKKLGVKFQT-NVVVGRSVTIDELMEEDGFDAVFIGVGAG--- 250
Query: 103 VIPIFQGLTEEM--GFYTSKTFLPRV-----ATSSKKGLCGGCKKESLPILKGTVIVLGA 155
+P F G+ E G Y++ FL RV S+ CK ++ V V+G
Sbjct: 251 -LPWFMGIPGENLNGVYSANEFLTRVNLMKAYDSNYDSPVFDCKGKN-------VAVIGG 302
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKD 215
G+TA D +A R GA KV +++R+ + A EE++ A EE EF+ SPV+ +
Sbjct: 303 GNTAMDAVRTARRLGAEKVYIIYRRSEKEMPARIEEIKHAKEEGVEFIMLNSPVEFVGDE 362
Query: 216 N----KIAGMQFNRTEQNEKGEW----VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIK 267
N + ++ E +E G V+D E I + I GS L + +
Sbjct: 363 NGWLKGVKCLKMELGEPDESGRRRPVPVKDSEYVIDIDMVVISIGNGSNPL---IKQTTP 419
Query: 268 PVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNN 327
+ K G VN TM TS GV+ GGD T + ++ G+TAA IH +E N
Sbjct: 420 EIGTSKKGTIVVNQETMQTSKKGVYAGGDIVTGGATVILAMGAGRTAAKAIH---EELMN 476
Query: 328 LTV 330
+TV
Sbjct: 477 VTV 479
>gi|423138192|ref|ZP_17125835.1| dihydroorotate dehydrogenase [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371958475|gb|EHO76190.1| dihydroorotate dehydrogenase [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 305
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 DDYVYVADKISKSPNVKALELNISCPNVKHG------GIQFGTDPNVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEAGGADGLTMINTLIGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ + L L LKG
Sbjct: 273 PFVCPKIIDNLESALNKLGVNHILDLKG 300
>gi|417809212|ref|ZP_12455894.1| dihydroorotate dehydrogenase [Lactobacillus salivarius GJ-24]
gi|335351168|gb|EGM52662.1| dihydroorotate dehydrogenase [Lactobacillus salivarius GJ-24]
Length = 314
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 576 KDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
+DD++E++ K ++G +ALELN+SCP+ + E GM A G PE+ ++ V+ +P
Sbjct: 110 EDDYVEVATKLSQSGMVNALELNISCPN-VHEGGM--AFGTVPEVAERLTKKVKEVSTVP 166
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+T+I IAKA G ADG+S INTV G+ A G P GG+
Sbjct: 167 VYVKLSPNVTDIVAIAKAVERGGADGISMINTVLGMHIDVASGKPVLG------NIMGGL 220
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG A + + ++ + +A+ + PI+G+GG+++ D L+ AGA AV + +A
Sbjct: 221 SGKAVKAIAIRMIYQVAQNT-DLPIIGMGGVETVDDVLEMYMAGASAVAVGTA 272
>gi|115525857|ref|YP_782768.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhodopseudomonas palustris BisA53]
gi|115519804|gb|ABJ07788.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodopseudomonas palustris BisA53]
Length = 665
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 18/287 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP YRLP D + E +++ LG + E+ L RD ++ L GY A+F+G+G
Sbjct: 302 IPSYRLPKDTLAMETDIILALGGRFLFEQRLG-RDFSVNDLFDQGYKAVFLGLGCQQGTA 360
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDTAFDC 162
+ + G++T FL +V G+ P+ LKG V+V+G G+ A DC
Sbjct: 361 LGVEGEDAAPQGYFTGIDFLLKV-HDHVDGIA--------PLALKGNVVVVGGGNVAMDC 411
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
SA+R GA V V++R+ ++ A P EV+ A E F +P ++ ++ KI G+
Sbjct: 412 VRSAIRLGAEAVHVIYRRTIEDMPADPTEVEAALAEGVHFHVLCNPTRIVTENGKITGVV 471
Query: 223 FNRTEQNEKGEWVEDEEQ-----RIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYP 277
R EQ+E E + + I + +++++A G + D ++E +K +++
Sbjct: 472 LARMEQSEPDESGRRKVRPIAGSEITMPCDFVVAAIGQQVEDGALIEG-NGIKFNRWNCV 530
Query: 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
+ +ATS PGVF GGD T V ++ G AA +I+ +IQ
Sbjct: 531 ATD-RVLATSRPGVFAGGDCVTGPSTLVYAMAAGLKAARNINDWIQH 576
>gi|410455458|ref|ZP_11309338.1| dihydroorotate dehydrogenase 1B [Bacillus bataviensis LMG 21833]
gi|409929285|gb|EKN66370.1| dihydroorotate dehydrogenase 1B [Bacillus bataviensis LMG 21833]
Length = 313
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 121/206 (58%), Gaps = 14/206 (6%)
Query: 575 NKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
N++D++ ++++ KA ALELN+SCP+ + G+A G PE+ + + V+ ++
Sbjct: 104 NEEDYVTVAREISKATNVQALELNISCPN---VKTGGIAFGTIPEVAKRLIRKVKEVSEV 160
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKL+PN+TNI D+A+A EG ADG++ INT+ G+ G P A T GG
Sbjct: 161 PVYVKLSPNVTNIVDMARAVEEGGADGLTMINTLVGMRLDLKTGRPILANRT------GG 214
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF 753
+SG A +P+ ++ + +++ + PI+G+GG+ SA+ +++ AGA AV + + F
Sbjct: 215 LSGPAIKPIAIRMIYEVSQAV-SLPIIGMGGVQSAEDVIEYFYAGASAVAVGTMNFVDPF 273
Query: 754 ---TVVDDYITGLQTLLYLKSTQLKG 776
T++++ L+ L + ++L G
Sbjct: 274 VCPTIIEELPVLLEKLGFEHISELSG 299
>gi|336400209|ref|ZP_08580997.1| dihydroorotate dehydrogenase [Fusobacterium sp. 21_1A]
gi|336163406|gb|EGN66338.1| dihydroorotate dehydrogenase [Fusobacterium sp. 21_1A]
Length = 305
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKAG-ADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 DDYVYVADKISKSSNVKALELNISCPNVKHG------GIQFGTDPNVARNLTKKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVETGGADGLTMINTLVGIVLNRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ L L LKG
Sbjct: 273 PFVCPKIIDNLEIALDELGVNHILDLKG 300
>gi|325958065|ref|YP_004289531.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
AL-21]
gi|325329497|gb|ADZ08559.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
AL-21]
Length = 300
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 16/215 (7%)
Query: 567 IASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLW 626
IASI N D++ +++ ++ DA+ELN+SCPH MG G G A GQDP + +I
Sbjct: 92 IASIYGA-NPDEFSKIATHIQED-VDAIELNVSCPHAMG--GCGAAIGQDPLLTSSIVSA 147
Query: 627 VRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLS-ADGNPWPAVGT 685
V+ SV +P VKLTPN+T+I ++A +A + AD ++ IN++ M + G P +
Sbjct: 148 VKESVNVPILVKLTPNVTDIVEVAVSAQDAGADALTLINSLGPGMKIDITTGKPILS--- 204
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+GG+SG A +P+ ++ V + P++G+GGI + + L+FI AGA VQI
Sbjct: 205 ---NRFGGMSGPAIKPVAVRCVYDVFDAV-EIPVVGVGGIRNYEDVLEFIYAGATCVQIG 260
Query: 746 SAVQNQDF----TVVDDYITGLQTLLYLKSTQLKG 776
+++ + VV+D ++ + Y K ++ G
Sbjct: 261 TSIMYEGMEIFGKVVNDLEVFMEKMGYTKLEEMVG 295
>gi|225849961|ref|YP_002730195.1| dihydroorotate dehydrogenase 1B [Persephonella marina EX-H1]
gi|225646103|gb|ACO04289.1| dihydroorotate dehydrogenase, catalytic subunit (dihydroorotate
oxidase) (dhodehase) (dhodase) (dhod) [Persephonella
marina EX-H1]
Length = 320
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRN 622
++++A++ ++D++L++++ KA G D LELN+SCP+ + G+A G DPE + N
Sbjct: 103 TVIVANVFGE-DEDEYLKVAEVLNKADGVDLLELNVSCPN---VKKGGIAFGSDPETLFN 158
Query: 623 ISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA 682
+ ++ ++ P VKL+PNIT+I D A A+ E ADG+ INT+ G M++ D P
Sbjct: 159 LVYRLKQVMEKPLLVKLSPNITDILDTATASVEAGADGLVLINTLLG-MAIDID-KEEPI 216
Query: 683 VGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADVALQFIQAGAHA 741
+G + GG+SG A P+ ++ + + + + + PI+G+GGI +A ALQ I AGA +
Sbjct: 217 IGMRT----GGLSGPAILPVAVRMIYQVYEKYGSSVPIIGVGGITTAQDALQHILAGAVS 272
Query: 742 VQICSA 747
VQI +A
Sbjct: 273 VQIGTA 278
>gi|316932115|ref|YP_004107097.1| glutamate synthase [Rhodopseudomonas palustris DX-1]
gi|315599829|gb|ADU42364.1| glutamate synthase (NADPH), homotetrameric [Rhodopseudomonas
palustris DX-1]
Length = 994
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 25/292 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP +RLP D ++ E++ +KD+GVK E + + + TIE+L +D F +
Sbjct: 475 IPSFRLPRDIIDREIQRLKDIGVKFETNKVVG-KTFTIEQLMRD---RGFDAVFVAAGAG 530
Query: 104 IPIFQGLTEEMG--FYTSKTFLPRVATSSKKGLCGGCKKESL--PILKG-TVIVLGAGDT 158
P F G+ E Y++ FL R+ L GG + L P+ G +VIV+GAG+T
Sbjct: 531 APTFLGIPGEFAGRVYSANEFLTRI------NLMGGDRFPYLDTPVSVGNSVIVIGAGNT 584
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------D 212
A DC A R GA V V+R+ A EE++ A EE +F SPV++ D
Sbjct: 585 AMDCLRVARRVGAATVRCVYRRSEAEAPARIEEIRHAKEEGVDFFFLHSPVEILVTESGD 644
Query: 213 VKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
V+ ++ M+ ++ + + V +E I+L+ + +I A G+ N ++ P ++L
Sbjct: 645 VRAVRLQKMELGEADERGRRKPVPLDE-FIELECDTVIYALGTK--PNPIIGQATPGLEL 701
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
+K+G + T +T++PGVF GGD T + +++ G+ AA I +++
Sbjct: 702 NKWGNIAADDDTQSTNMPGVFAGGDIVTGGATVILAMSAGRRAAKSIAAWLR 753
>gi|398304118|ref|ZP_10507704.1| dihydroorotate dehydrogenase 1B [Bacillus vallismortis DV1-F-3]
Length = 311
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 106/172 (61%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D+++++ KA ALELN+SCP+ + G+A G +PEM +++ V+ +P
Sbjct: 104 EDYVQVAANIGKAPNVHALELNISCPN---VKTGGIAFGTNPEMAADLTKAVKEVSDVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NIT+IA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITEIASAIEEAGADGLTMINTLIGMRLDLTSGKPILANQT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ N PI+G+GG+ +A+ AL+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-NIPIIGMGGVQTAEDALEFLLAGASAVAVGTA 265
>gi|377556140|ref|ZP_09785862.1| Dihydroorotate dehydrogenase [Lactobacillus gastricus PS3]
gi|376168741|gb|EHS87473.1| Dihydroorotate dehydrogenase [Lactobacillus gastricus PS3]
Length = 306
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 113/174 (64%), Gaps = 12/174 (6%)
Query: 576 KDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRS-SVKI 633
+ D++E+++K ++G A+ALELN+SCP+ G++ G DP+ V +++ V++ + +
Sbjct: 109 ESDYVEVAQKLAQSGLANALELNVSCPN---VASGGMSFGVDPKTVESLTSQVKAVTGNV 165
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P +VKLTPN+T+IT+IA+AA +G ADG+S INTV G L D AV K + GG
Sbjct: 166 PVYVKLTPNVTDITEIARAAEDGGADGLSLINTVLG---LHIDIRTRKAVLGKGM---GG 219
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG+A +P+ ++ V + + N PI+G+GG+++ ++F AGA A+ + +A
Sbjct: 220 FSGHAVKPIAVRMVYQV-RQVTNLPIIGMGGVETPADVIEFFLAGADAIAVGTA 272
>gi|295091342|emb|CBK77449.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Clostridium cf. saccharolyticum K10]
Length = 300
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 121/205 (59%), Gaps = 13/205 (6%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +D++++ +K D LE+N+SCP+ + G+A GQDP+ V I+ V+
Sbjct: 99 VCGRTTEDYIDVVEKLSDQPVDMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKRH 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT +AKAA G AD +S INT++G M + + AV K
Sbjct: 156 AKQPVIMKLSPNVTDITVMAKAAEAGGADVLSLINTITG-MKIDIHRRTF-AVANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
GG+SG A +P+ ++ V +A + P++G+GGI AD A++F+ AGA AV + +A +
Sbjct: 211 -GGLSGPAIKPVAVRMVYQVANAV-SLPVIGMGGIMCADDAIEFMMAGATAVAVGTANFH 268
Query: 751 QDFTVVDDYITGLQTLLYLKSTQLK 775
+ ++ + G++ Y++ Q++
Sbjct: 269 NPYA-TEEIVKGIEA--YMRQYQVE 290
>gi|403514735|ref|YP_006655555.1| dihydroorotate dehydrogenase 1B [Lactobacillus helveticus R0052]
gi|403080173|gb|AFR21751.1| dihydroorotate dehydrogenase 1B [Lactobacillus helveticus R0052]
Length = 307
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 112/188 (59%), Gaps = 14/188 (7%)
Query: 570 IMCTYNKD---DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + D D++E++KK +G +ALE+N+SCP+ + + GM + G +V ++
Sbjct: 99 IMASVGGDSEEDYVEVAKKLSASGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEKLTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++ +V +P +VKLTPN+T+I +IAKAA G ADG+S INT+ G+ P
Sbjct: 156 KIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTLLGMRIDIKTRKPLLG--- 212
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ +S + + PI+G+GGI+SA ++F+ AGA+AV +
Sbjct: 213 ---HNMGGLSGEAVKPIAIRMISQVRQAI-TLPIIGMGGINSAQDVIEFMLAGANAVAVG 268
Query: 746 SAVQNQDF 753
+A N +
Sbjct: 269 TAHFNDEL 276
>gi|358064288|ref|ZP_09150865.1| dihydroorotate dehydrogenase [Clostridium hathewayi WAL-18680]
gi|356697495|gb|EHI59077.1| dihydroorotate dehydrogenase [Clostridium hathewayi WAL-18680]
Length = 300
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +D+LE+ ++ D LE+N+SCP+ + G+A GQDP+ V I+ V+
Sbjct: 99 VCGKTTEDYLEVVERLADEPVDLLEINISCPN---VKEGGIAFGQDPKAVEAITREVKKY 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT +AKAA G AD +S INT++G M + + A+ K
Sbjct: 156 AKQPVIMKLSPNVTDITVMAKAAEAGGADVLSLINTLTG-MKIDIHKRAF-ALANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ ++ V +A+ PI+G+GGI +A+ A++FI AGA AV + +A
Sbjct: 211 -GGMSGPAVKPVAVRMVYQVAQAV-TLPIIGMGGIQNAEDAIEFILAGATAVSVGTA 265
>gi|295693236|ref|YP_003601846.1| dihydroorotate dehydrogenase [Lactobacillus crispatus ST1]
gi|295031342|emb|CBL50821.1| Dihydroorotate dehydrogenase [Lactobacillus crispatus ST1]
Length = 307
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 110/171 (64%), Gaps = 11/171 (6%)
Query: 578 DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636
D++E+++K +G +ALE+N+SCP+ + + GM D +V ++ +++ V IP +
Sbjct: 110 DYVEVAQKLSNSGLVNALEINVSCPN-VAQGGMSFGVHAD--VVEELTRKIKAVVNIPIY 166
Query: 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696
VKLTPN+T+IT IAKAA +G ADG+S INT+ G M + P +G GG+SG
Sbjct: 167 VKLTPNVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKR-RPLLG----HNMGGLSG 220
Query: 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
A +P+ ++ +S + + + PI+G+GGI SA+ ++F+ AGA+A+ + +A
Sbjct: 221 EAVKPIAIRMISQV-RQITSLPIIGMGGIASAEDVVEFMLAGANAIAVGTA 270
>gi|150403356|ref|YP_001330650.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis C7]
gi|150034386|gb|ABR66499.1| dihydroorotate dehydrogenase family protein [Methanococcus
maripaludis C7]
Length = 304
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 11/188 (5%)
Query: 570 IMCTYNKDDWLELSKKTE--KAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV 627
I Y K+D +E K E D LELN+SCPH G G G + GQDP + +N+ V
Sbjct: 98 IGSIYGKND-VEFQKAAEIIVPHVDVLELNISCPHAGG--GYGSSIGQDPCLCKNVVSAV 154
Query: 628 RSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ IP KLTPN+T+I +IA A ADG+ AINT+ M + + + P +G K
Sbjct: 155 KDVSDIPVIAKLTPNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIE-SGVPILGNK- 212
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ +K V I + P++G+GG+ + A++F+ AGA AVQ+ +
Sbjct: 213 ---VGGMSGKAIKPIAVKNVYDIFSAV-DVPVIGVGGVTTGADAIEFMMAGASAVQVGTG 268
Query: 748 VQNQDFTV 755
V + + +
Sbjct: 269 VYYRGYDI 276
>gi|385839979|ref|YP_005863303.1| Dihydroorotate dehydrogenase [Lactobacillus salivarius CECT 5713]
gi|417787247|ref|ZP_12434930.1| dihydroorotate dehydrogenase, catalytic subunit [Lactobacillus
salivarius NIAS840]
gi|300214100|gb|ADJ78516.1| Dihydroorotate dehydrogenase [Lactobacillus salivarius CECT 5713]
gi|334307424|gb|EGL98410.1| dihydroorotate dehydrogenase, catalytic subunit [Lactobacillus
salivarius NIAS840]
Length = 314
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 576 KDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
+DD++E++ K ++G +ALELN+SCP+ + E GM A G PE+ ++ V+ +P
Sbjct: 110 EDDYVEVATKLSQSGMVNALELNISCPN-VHEGGM--AFGTVPEVAERLTKKVKEVSTVP 166
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+T+I IAKA G ADG+S INTV G+ A G P GG+
Sbjct: 167 VYVKLSPNVTDIVAIAKAVERGGADGISMINTVLGMHIDVASGKPVLG------NIMGGL 220
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG A + + ++ + +A+ + PI+G+GG+++ D L+ AGA AV + +A
Sbjct: 221 SGKAVKAIAIRMIYQVAQNT-DLPIIGMGGVETVDDVLEMYMAGASAVAVGTA 272
>gi|452974543|gb|EME74363.1| dihydroorotate dehydrogenase 1B [Bacillus sonorensis L12]
Length = 311
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E++++ KA ALELN+SCP+ + G+A G PEM ++ V+ +P
Sbjct: 104 EDYVEVAEEISKAPNVHALELNISCPN---VKTGGIAFGTRPEMAAELTKAVKQVSSVPV 160
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NITDIA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 161 YVKLSPNVANITDIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 214
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ + PI+G+GG+ SA+ L+F+ AGA AV + +A
Sbjct: 215 GPAVKPVAIRMVYEVSQAV-DIPIIGMGGVQSAEDVLEFLLAGASAVAVGTA 265
>gi|291523201|emb|CBK81494.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Coprococcus catus GD/7]
Length = 301
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 122/198 (61%), Gaps = 12/198 (6%)
Query: 571 MCTYNKDDWLELSKK-TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRS 629
+C ++ +++L++ ++ ++ D LE+N+SCP+ + G+A GQDP+ V I+ V++
Sbjct: 99 VCGHSTEEYLDVVERLADEPRVDMLEINISCPN---VKEGGIAFGQDPKAVEAITKAVKA 155
Query: 630 SVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689
K P +KL+PN+T+IT +AKAA G AD +S INT++G M + + + A+ K
Sbjct: 156 KAKQPIIMKLSPNVTDITVMAKAAEAGGADCLSLINTLTG-MKIDIERQTF-AIANKT-- 211
Query: 690 TYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQ 749
GG+SG A +P+ ++ V +A PI+G+GGI +A+ A++FI AGA AV I +A
Sbjct: 212 --GGLSGPAVKPVAVRMVYQVANAV-KIPIIGMGGICTAEDAMEFILAGATAVSIGTANF 268
Query: 750 NQDFTVVDDYITGLQTLL 767
+T V + I G++ +
Sbjct: 269 TNPYTTV-EVIDGIEAYM 285
>gi|90961176|ref|YP_535092.1| dihydroorotate dehydrogenase 1B [Lactobacillus salivarius UCC118]
gi|90820370|gb|ABD99009.1| Dihydroorotate dehydrogenase [Lactobacillus salivarius UCC118]
Length = 314
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 576 KDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
+DD++E++ K ++G +ALELN+SCP+ + E GM A G PE+ ++ V+ +P
Sbjct: 110 EDDYVEVATKLSQSGMVNALELNISCPN-VHEGGM--AFGTVPEVAERLTKKVKEVSTVP 166
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+T+I IAKA G ADG+S INTV G+ A G P GG+
Sbjct: 167 VYVKLSPNVTDIVAIAKAVERGGADGISMINTVLGMHIDVASGKPVLG------NIMGGL 220
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG A + + ++ + +A+ + PI+G+GG+++ D L+ AGA AV + +A
Sbjct: 221 SGKAVKAIAIRMIYQVAQNT-DLPIIGMGGVETVDDVLEMYMAGASAVAVGTA 272
>gi|227530640|ref|ZP_03960689.1| dihydroorotate dehydrogenase 1B [Lactobacillus vaginalis ATCC
49540]
gi|227349421|gb|EEJ39712.1| dihydroorotate dehydrogenase 1B [Lactobacillus vaginalis ATCC
49540]
Length = 305
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 131/244 (53%), Gaps = 34/244 (13%)
Query: 510 NKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSILIAS 569
N + +A++ND + + G N + I H+ + L SI AS
Sbjct: 58 NPQPQIAVLNDGVLNSVGLTNPGVNVVAGEKIP--------HLKHQYPDLPLVASIGGAS 109
Query: 570 IMCTYNKDDWLELSKKTEKAG-ADALELNLSCP---HGMGERGMGLACGQDPEMVRNISL 625
+ +D++ ++++ G DALELN+SCP HG G+A G DP++ ++
Sbjct: 110 V------EDYVMVTERLAATGLVDALELNISCPNVKHG------GMAFGTDPQVAEKLTK 157
Query: 626 WVRS-SVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAV 683
V++ S +P +VKLTPN+T+I +IA+A G ADG+S INT+ G+ ++L P +
Sbjct: 158 AVKAASGDVPVYVKLTPNVTDIVEIAQAVEAGGADGLSMINTLLGMKINLKTR---KPVL 214
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G GG+SG A +P+ ++ + ++ N PI+G GGI SA+ ++F AGA AVQ
Sbjct: 215 G----NIMGGLSGTAIKPLAIRMIYQVSHAV-NIPIIGEGGISSAEDVIEFFLAGASAVQ 269
Query: 744 ICSA 747
+ SA
Sbjct: 270 VGSA 273
>gi|160880418|ref|YP_001559386.1| dihydroorotate dehydrogenase 1B [Clostridium phytofermentans ISDg]
gi|229485557|sp|A9KKR5.1|PYRDB_CLOPH RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|160429084|gb|ABX42647.1| dihydroorotate dehydrogenase family protein [Clostridium
phytofermentans ISDg]
Length = 300
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C + +++E+ ++ + D LELN+SCP+ + +A GQDP+M+ I ++
Sbjct: 99 VCGKSVKEYVEVVERLSEEAVDLLELNISCPN---VKEGCIAFGQDPKMIAMIMDEIKRH 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P VKL+PN+T+IT++AKAA G AD +S INT++G M + + + A+ K
Sbjct: 156 AKQPVIVKLSPNVTDITEMAKAAEAGGADALSLINTLTG-MKIDINHRAF-AIANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A +P+ ++ V +A PI+G+GGI +A+ AL+FI AGA V + +A
Sbjct: 211 -GGMSGPAVKPIAVRMVYQVANAV-KLPIIGMGGIQNAEDALEFIMAGATVVAVGTA 265
>gi|218134202|ref|ZP_03463006.1| hypothetical protein BACPEC_02092 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991577|gb|EEC57583.1| dihydroorotate dehydrogenase 1B [[Bacteroides] pectinophilus ATCC
43243]
Length = 300
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 107/177 (60%), Gaps = 10/177 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C +K+D++E+ ++ D LE+N+SCP+ + G+A GQ E I+ V++
Sbjct: 99 VCGRSKEDYVEVVERLADEPVDMLEINISCPN---VKEGGIAFGQKAEAAYEITKAVKAV 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT++A+A G AD VS INT++G M + + + AV K
Sbjct: 156 AKQPVIMKLSPNVTDITEMARAVEAGGADVVSLINTLTG-MKIDINRRTF-AVANKT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
GG+SG A RP+ ++ V ++ PI+G+GGI AD AL+FI AGA AV + +A
Sbjct: 211 -GGLSGPAIRPVAVRMVYQVSNAV-KIPIIGMGGITCADDALEFIMAGATAVSVGTA 265
>gi|237743993|ref|ZP_04574474.1| dihydroorotate dehydrogenase [Fusobacterium sp. 7_1]
gi|229433024|gb|EEO43236.1| dihydroorotate dehydrogenase [Fusobacterium sp. 7_1]
Length = 305
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ ++ K K+ ALELN+SCP HG G+ G DP + +N++ V++
Sbjct: 107 DDYVYVADKISKSPNVKALELNISCPNVKHG------GIQFGTDPNVAKNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEAGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-VDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ T L L LKG
Sbjct: 273 PFVCPKIIDNLETALDELGVNHILDLKG 300
>gi|406983620|gb|EKE04786.1| hypothetical protein ACD_20C00003G0013 [uncultured bacterium]
Length = 470
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 152/299 (50%), Gaps = 24/299 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP A++ E+ +K +GV+ + + + +T++ L DGY A FI G
Sbjct: 179 IPEFRLPRTALDREINSLKQIGVEFKTNVIIG-KSLTMQDLFDDGYDAAFICSGAG---- 233
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKE-SLPILKGT-VIVLGAGDTA 159
+P+ + E G Y++ FL RV L + E PI G V V+G G+TA
Sbjct: 234 LPMMLNIAGENYNGVYSANEFLTRV------NLMRANRAEYPTPIKTGKKVAVIGGGNTA 287
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219
D A +A R G ++V +V+R+ + A E++ A EE F SPV++ +D ++
Sbjct: 288 MDAARTAKRIGFDEVTIVYRRSEAELPARKAEIEHAKEEGVNFKLLHSPVEIIGQDGYVS 347
Query: 220 GMQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGST---LLDNDVLEAIKPVKL 271
GM+ E E E + + + I + + +I A G+ ++ LE + +
Sbjct: 348 GMKLQVMELGEPDESGRRKPIPVKGKIIDMSVDTVIVALGTNPNPIIQKSALEEGLNLDV 407
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDT-TVESVNDGKTAAWHIHKYIQEKNNLT 329
+ GY ++ T +S+PGV+ GGD A ++ + ++ GK AA I++Y+++K +L+
Sbjct: 408 NARGYIIIDPETGLSSIPGVYAGGDVAPTGESNAINAMGAGKKAAKAINEYLEKKKSLS 466
>gi|240102413|ref|YP_002958722.1| dihydroorotate dehydrogenase 1B [Thermococcus gammatolerans EJ3]
gi|239909967|gb|ACS32858.1| Dihydroorotase dehydrogenase (pyrD) [Thermococcus gammatolerans
EJ3]
Length = 300
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 12/181 (6%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIA 650
ADA ELNLSCPH +G G+ GQ+PE V + V+ + P KLTPNI +IT +
Sbjct: 117 ADAFELNLSCPHA---KGYGMEIGQNPENVYEVVKAVKDATDRPVIAKLTPNIDDITKLG 173
Query: 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSI 710
AA + AD VSAINT L +++ D + + ++ GG SG +P+ L+AV +
Sbjct: 174 LAAEKAGADAVSAINT---LKAIAIDIYARRPILSNRV---GGYSGPGVKPVALRAVYDL 227
Query: 711 AKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLK 770
AK+ + P++GIGGI + A++F+ AGA A+QI +AV + + V + G++ YL+
Sbjct: 228 AKVL-DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVSLRGWKVFREINEGIKA--YLE 284
Query: 771 S 771
S
Sbjct: 285 S 285
>gi|377832576|ref|ZP_09815534.1| dihydroorotate oxidase [Lactobacillus mucosae LM1]
gi|377553768|gb|EHT15489.1| dihydroorotate oxidase [Lactobacillus mucosae LM1]
Length = 292
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 28/196 (14%)
Query: 592 DALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITD 648
A+ELN+SCP HG GLA G DPE++ ++ + +P +VKLTPNIT+I
Sbjct: 112 SAMELNVSCPNVKHG------GLAMGTDPELLERLTRRCVAVSNVPVYVKLTPNITDIVP 165
Query: 649 IAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVS 708
+AKAA G A G++ INT++G+ P K GG+SG A +P+ L+ +
Sbjct: 166 LAKAAINGGAAGLTMINTLTGMAIDLKTRKP------KLANVTGGLSGAALKPIALRMIH 219
Query: 709 SIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI----------CSAVQNQDFTVVDD 758
+ + F N PI+G+GGI++ + L+F+ AGA+AV++ C + +Q TV+D
Sbjct: 220 QV-RQFSNIPIIGVGGIETPEDVLEFMMAGANAVEVGAASFHDPLACPKIIDQLPTVMDY 278
Query: 759 YITGLQTLLYLKSTQL 774
Y G++ L L +
Sbjct: 279 Y--GIEKLTDLNEVRF 292
>gi|385799801|ref|YP_005836205.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Halanaerobium
praevalens DSM 2228]
gi|309389165|gb|ADO77045.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Halanaerobium
praevalens DSM 2228]
Length = 471
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 145/294 (49%), Gaps = 25/294 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V EVE +K LGV+I+ + + ITIE+L + Y +IFIG+G
Sbjct: 190 IPEFRLPKTIVEQEVESIKKLGVEIKL-NVVVGKSITIEELFEQNYKSIFIGVGAG---- 244
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCK--KESLPILKGT-VIVLGAGDT 158
+P F + E G Y++ FL RV L K + P+ G V ++GAG+
Sbjct: 245 LPRFLNIPGENLNGVYSANEFLTRV------NLMKAFKYPEYKTPVAVGNKVAIVGAGNV 298
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A D A +A R GA V VV+R+ + A EE+ A EE EF +P+ + + K+
Sbjct: 299 AMDAARTAKRLGAEDVYVVYRRSEEQMPARSEEIHHAQEEGIEFKLLNNPIAIKGEKGKV 358
Query: 219 AGMQFNRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGSTLLDNDVLEA-IKPVKLD 272
M+ + E EK IK L+ + +I A G N +L A K ++
Sbjct: 359 KAMECQKMELGEKDNSGRRRPLPIKNSNWDLELDTVIIAIGQN--PNPLLTANTKDLETK 416
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
+G +V+ + TS GV+ GGD T ++++ GK AA +I Y+ EK+
Sbjct: 417 SWGGIKVD-SGQKTSREGVYAGGDIVTGGATVIQAMGAGKKAAQNIKNYLLEKS 469
>gi|260497940|ref|ZP_05816057.1| dihydroorotate oxidase [Fusobacterium sp. 3_1_33]
gi|260196501|gb|EEW94031.1| dihydroorotate oxidase [Fusobacterium sp. 3_1_33]
Length = 305
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 DDYVYVADKISKSPNVKALELNISCPNVKHG------GIQFGTDPNVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVETGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ + L L LKG
Sbjct: 273 PFVCPKIIDNLESTLDELGVNHILDLKG 300
>gi|224541102|ref|ZP_03681641.1| hypothetical protein CATMIT_00253 [Catenibacterium mitsuokai DSM
15897]
gi|224525969|gb|EEF95074.1| glutamate synthase (NADPH), homotetrameric [Catenibacterium
mitsuokai DSM 15897]
Length = 462
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 140/296 (47%), Gaps = 28/296 (9%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S IP++RLP D V E++ V DLGVK E + R ITI++L++ GY A+F+G G
Sbjct: 180 SYGIPEFRLPKDLVQAEIDGVADLGVKFETNVVVG-RSITIDELQESGYDAVFVGAGAG- 237
Query: 101 ANVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPI---LKGTVIVLGA 155
+P FQG+ E G Y + FL RV L G + + P + TV V+GA
Sbjct: 238 ---LPRFQGIPGENLDGVYAANEFLTRV------NLMKGYEFPNHPTPVKVADTVCVVGA 288
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVD--- 212
G+ A D A +A R GA V +V+R+ I A EEV A EE F +PV V
Sbjct: 289 GNVAMDAARTAKRLGAKNVYIVYRRSDAEIPARAEEVHHAKEEGIIFKLLTNPVAVHGDN 348
Query: 213 --VKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-V 269
VK + M+ + + + V E + ++ A G + N ++ P +
Sbjct: 349 GAVKSLECVEMELGEPDASGRRRPVVKEGTNFTIDCGTVVIAIGQS--PNPLIRQTTPGL 406
Query: 270 KLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
K+G V T TS GV+ GGD + T + ++ GK AA K I EK
Sbjct: 407 DCQKWGGIIVEEETNHTSKEGVWAGGDVVTGAATVILAMGAGKKAA----KAIDEK 458
>gi|365169236|ref|ZP_09360850.1| hypothetical protein HMPREF1006_01726 [Synergistes sp. 3_1_syn1]
gi|363618745|gb|EHL70087.1| hypothetical protein HMPREF1006_01726 [Synergistes sp. 3_1_syn1]
Length = 824
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 22/284 (7%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
+P+YRLP D E+EL +++GV+ + DI+I++LRK GY A++I +G N
Sbjct: 486 LPEYRLPADKFAKELELFREMGVEFVTGTKIG-EDISIKELRKRGYMAVYIAVGDHNDRK 544
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+ + +G E G + +FL V T GGC L+G VIV+G G+ + DC
Sbjct: 545 LGV-EGEDSE-GVTSGVSFLRSVKTG------GGCD------LRGKEVIVIGGGNVSMDC 590
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
A +A+R GA KV + + + A P+E++ EE P+ + K+ + G+
Sbjct: 591 ARTAIRLGAAKVSLFCLEKEDEMPAHPDEIREGKEEGLYVFNGWGPMAISAKEGRADGVT 650
Query: 223 FNRTEQ--NEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
F + + G + DE ++K+ A+++I A G L + + A +D G
Sbjct: 651 FKKCTAVFDASGRFNPSYDESAQMKVHADFVICAIGQAL--SREVAAGDEELVDIRGNVI 708
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
T+ P +F GGD A D+ V VN GK AA I +Y+
Sbjct: 709 KAAYRGTTATPWIFAGGDCATGPDSVVGGVNRGKEAASSIDRYL 752
>gi|375082793|ref|ZP_09729839.1| putative oxidoreductase [Thermococcus litoralis DSM 5473]
gi|374742490|gb|EHR78882.1| putative oxidoreductase [Thermococcus litoralis DSM 5473]
Length = 476
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 161/291 (55%), Gaps = 20/291 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP D + E+E +K LGV+I+ + + R +T ++L ++ Y AIFIG G
Sbjct: 195 IPEFRLPNDTIEKELEKLKKLGVEIKTD-YIVGRTVTFDELLEE-YDAIFIGTGAGTPK- 251
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDC 162
+P G+ G Y++ FL RV + PI G VIV+GAG+TA D
Sbjct: 252 LPDIPGINLN-GIYSANEFLTRVNLMKAYAF----PEYDTPIKVGKKVIVIGAGNTAMDA 306
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A +A R GA +V + +R+G ++ A EEV A EE +F F++P++ + ++ ++ +
Sbjct: 307 ARTARRLGA-EVTIAYRRGEEDVTARVEEVAHAKEEGVKFEFFLNPIEFIGDENGRVKAV 365
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDKYG 275
+F + E++ +G+ + + + L+A+ ++ A G T + +L P ++ D+YG
Sbjct: 366 KFMKMKPLEERDARGKRKIVPTGETVTLEADTVVIAIGKT--TSKLLRMTLPQIEADEYG 423
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
+V+ M T++PGVF GGD T + ++ DG+ AA I +Y++EK
Sbjct: 424 VIKVDENLM-TNIPGVFAGGDAIRGEATVILAMGDGRKAAKGIKQYLEEKR 473
>gi|338214295|ref|YP_004658356.1| glutamate synthase [Runella slithyformis DSM 19594]
gi|336308122|gb|AEI51224.1| Glutamate synthase (NADPH) [Runella slithyformis DSM 19594]
Length = 598
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 141/301 (46%), Gaps = 25/301 (8%)
Query: 32 ERPVAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTA 91
++P+ S+IP +RLP +N EV + DLG+ +TR ++ ++ GY A
Sbjct: 139 DQPMGGGMMRSQIPSFRLPDSVLNEEVGYILDLGIHTH----FNTRVNSLREVLNQGYDA 194
Query: 92 IFIGIGKPNANVIPIFQGLTE-EMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTV 150
+FIG G P + G E + + +L VA E + V
Sbjct: 195 VFIGTGAPKGKDLADLPGRWEAKANIHIGIEWLASVAF------------EHTAKIGKKV 242
Query: 151 IVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ 210
IVLG G+TA DC ++ R G +V VV R ++A P E++ A E L P
Sbjct: 243 IVLGGGNTAMDCCRTSRRLGGEEVKVVVRSPFKEMKASPWEIEDALHEDIPILECHVPKS 302
Query: 211 VDVKDNKIAGMQFNRTE---QNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEA 265
V+D K+ GM F + E +N + + V E + ++A+ ++ A G +N +E
Sbjct: 303 FVVEDGKLKGMTFEKVEAKYENGRRKLVSTGEPDVFIEADDVLVAIGQ---ENSFPWIER 359
Query: 266 IKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
++ +++G P ++ T +++P VF GGD+A + +V G TAA I + E+
Sbjct: 360 DLGLQFNEWGLPVLDEVTFQSTIPNVFFGGDSAMGPKNVITAVAQGHTAAVSIDLFCNEQ 419
Query: 326 N 326
+
Sbjct: 420 S 420
>gi|403234861|ref|ZP_10913447.1| dihydroorotate dehydrogenase 1B [Bacillus sp. 10403023]
Length = 303
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 112/186 (60%), Gaps = 14/186 (7%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++E++K+ KA ALELN+SCP+ + G+A G PE+ ++ +V+ +P
Sbjct: 106 EDYVEVAKEISKAPNVHALELNISCPN---VKTGGIAFGTIPEVAAELTRYVKEVSSVPV 162
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN++NI ++AKA E ADG++ INT+ G+ GNP A T GG+S
Sbjct: 163 YVKLSPNVSNIVEMAKAIEEAGADGLTMINTLIGMRIDLKTGNPILANKT------GGLS 216
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF-- 753
G A +P+ ++ + +++ PI+G+GGI +A+ L++ AGA AV + +A +
Sbjct: 217 GPAIKPVAIRMIHEVSQAV-AIPIIGMGGIQTAEDVLEYFYAGASAVAVGTANFVDPYVC 275
Query: 754 -TVVDD 758
T++DD
Sbjct: 276 PTIIDD 281
>gi|336053844|ref|YP_004562131.1| dihydroorotate dehydrogenase [Lactobacillus kefiranofaciens ZW3]
gi|333957221|gb|AEG40029.1| Dihydroorotate dehydrogenase [Lactobacillus kefiranofaciens ZW3]
Length = 307
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 115/189 (60%), Gaps = 16/189 (8%)
Query: 570 IMCTYNKD---DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + D D++E++KK +G +ALE+N+SCP+ + + GM + G +V ++
Sbjct: 99 IMASVGGDSEEDYVEVAKKLSDSGLVNALEINVSCPN-VAQGGM--SFGVHAGVVEKLTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
++ +V +P +VKLTPN+T+I +IAKAA G ADG+S INT L+ + D P +G
Sbjct: 156 KIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINT---LLGMRIDIKTRKPLLG 212
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG A +P+ ++ +S + + PI+G+GGI+SA ++F+ AGA+AV +
Sbjct: 213 HN----MGGLSGEAVKPIAIRMISQV-RQATTLPIIGMGGINSAQDVIEFMLAGANAVAV 267
Query: 745 CSAVQNQDF 753
+A N +
Sbjct: 268 GTAHFNDEL 276
>gi|357052213|ref|ZP_09113324.1| dihydroorotate dehydrogenase [Clostridium clostridioforme
2_1_49FAA]
gi|355387028|gb|EHG34061.1| dihydroorotate dehydrogenase [Clostridium clostridioforme
2_1_49FAA]
Length = 300
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS 630
+C ++++++ ++ AD LE+N+SCP+ + G+A GQDP+ V I+ V++
Sbjct: 99 VCGKTTEEYIDVVERLGDQPADMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKAH 155
Query: 631 VKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
K P +KL+PN+T+IT +A+AA G AD +S INT++G M + + A+ +
Sbjct: 156 AKQPIIMKLSPNVTDITVMARAAEAGGADAISLINTLTG-MKIDIHKKAF-ALANRT--- 210
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750
GG+SG A +P+ ++ V A+ PI+G+GGI +AD AL+FI AGA AV I +A +
Sbjct: 211 -GGLSGPAVKPVAVRMVYQAARAV-KVPIIGMGGIRNADDALEFILAGATAVAIGTANFH 268
Query: 751 QDFTVVD 757
+ V+
Sbjct: 269 NPYATVE 275
>gi|327399332|ref|YP_004340201.1| dihydroorotate dehydrogenase family protein [Hippea maritima DSM
10411]
gi|327181961|gb|AEA34142.1| dihydroorotate dehydrogenase family protein [Hippea maritima DSM
10411]
Length = 307
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 13/203 (6%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA+I T +++E+++K +K A+E+N+SCP+ G G+DP+MV ++
Sbjct: 99 IIANIYGT-EVAEFVEIAEKLDKEKLVSAIEVNVSCPN---VSAGGALFGKDPDMVFVLT 154
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
++ K P VKLTPN+ +I IA+AA G AD VS INT++G++ + P A
Sbjct: 155 SSIKKVTKKPVIVKLTPNVEDIAFIAQAAQSGGADAVSLINTITGMVIDTKTKKPVLANK 214
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T GG+SG A P+G++ V K PI+G+GGI +ADVALQ+I AGA +Q+
Sbjct: 215 T------GGLSGPAIYPVGVRMVYETYKKI-KIPIVGVGGIYNADVALQYIMAGASLIQV 267
Query: 745 CSAVQNQDFTVVDDYITGLQTLL 767
+A D ++ D I G++ L
Sbjct: 268 GTA-NFIDPSITVDIIKGIEEFL 289
>gi|240102953|ref|YP_002959262.1| putative oxidoreductase [Thermococcus gammatolerans EJ3]
gi|239910507|gb|ACS33398.1| Glutamate synthase (NADPH), homotetrameric (gltA) [Thermococcus
gammatolerans EJ3]
Length = 482
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 159/290 (54%), Gaps = 20/290 (6%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E++ ++ LGVKI + + + +TIE+L ++ Y A+FIG G +
Sbjct: 200 IPEFRLPKSIVESEIDKLRKLGVKILTD-HIVGKTVTIEELLEE-YDAVFIGSGAGTPRL 257
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDC 162
I G+ G YT+ FL RV + P+ G VIV+GAG+TA D
Sbjct: 258 INA-PGINLN-GIYTANEFLTRVNLMKAYLF----PEYDTPVKVGKRVIVIGAGNTAMDA 311
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQ-VDVKDNKIAGM 221
A SA R GA +V++ +R+G ++ A EEV+ A EE +F F++PV+ + ++ + +
Sbjct: 312 ARSARRFGA-EVIIAYRRGEEDVSARIEEVEHAKEEGIKFEYFINPVEFIGDENGNVKAV 370
Query: 222 QFNRT----EQNEKGEW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
+F + E++++G+ + + + ++A+ +I A G N ++ +K+++ G
Sbjct: 371 KFEKMKPLDERDKRGKRKIVGTGEYVTIEADTVIIAIGKH--PNRLIINTPGLKVER-GR 427
Query: 277 PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
V+ M TS+PGVF GGD T + ++ DG+ AA IH+Y+ +K
Sbjct: 428 IVVD-ENMMTSIPGVFAGGDAIRGEATVILAMGDGRRAAKAIHEYLTKKR 476
>gi|336418988|ref|ZP_08599255.1| dihydroorotate oxidase [Fusobacterium sp. 11_3_2]
gi|336163993|gb|EGN66905.1| dihydroorotate oxidase [Fusobacterium sp. 11_3_2]
Length = 305
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 DDYVYVADKISKSPNVKALELNISCPNVKHG------GIQFGTDPNVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEAGGADGLTMINTLIGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ + L L LKG
Sbjct: 273 PFVCPKIIDNLESTLDELGVNHILDLKG 300
>gi|154150653|ref|YP_001404271.1| dihydroorotate dehydrogenase 1B [Methanoregula boonei 6A8]
gi|153999205|gb|ABS55628.1| dihydroorotate dehydrogenase family protein [Methanoregula boonei
6A8]
Length = 296
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 588 KAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNIT 647
K A LELNLSCPH G G + G +P++V + V S++ +P +VKLTPN+T+IT
Sbjct: 115 KGMAAGLELNLSCPH---AEGYGASIGVNPDLVEKCTRAV-STLGMPTWVKLTPNVTDIT 170
Query: 648 DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAV 707
I KAA G A + A+NTV + +A P +G + YGG+SG A P+ ++ V
Sbjct: 171 AIGKAAERGGASAIVAVNTVKAMRISTALRR--PVLGNR----YGGLSGEAIFPVAVRCV 224
Query: 708 SSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVD 757
+ + + PI+G GGI SAD ++ + AGA AV+I SAVQ D TV +
Sbjct: 225 YELYEAC-SLPIIGCGGISSADNVIEMMMAGACAVEIGSAVQKHDITVFE 273
>gi|227904296|ref|ZP_04022101.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus ATCC
4796]
gi|227867944|gb|EEJ75365.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus ATCC
4796]
Length = 307
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 112/182 (61%), Gaps = 14/182 (7%)
Query: 570 IMCTYNKD---DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + D D++E++KK + +ALE+N+SCP+ + + GM + G P++V ++
Sbjct: 99 IMASVGGDSESDYVEVAKKLSDSDLVNALEINVSCPN-VAQGGM--SFGVHPDVVEELTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++ V +P +VKLTPN+T+I IA+AA +G ADG+S INTV G M + P +G
Sbjct: 156 KIKDVVDVPIYVKLTPNVTDIVAIAQAAEKGGADGISMINTVLG-MDIDVQTR-RPVLGH 213
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ +S + + PI+G+GGI SA+ ++F+ AGA AV +
Sbjct: 214 N----VGGLSGEAVKPIAIRMISQVYQNV-TLPIIGMGGISSAEDVIKFMLAGASAVAVG 268
Query: 746 SA 747
+A
Sbjct: 269 TA 270
>gi|116629731|ref|YP_814903.1| dihydroorotate dehydrogenase 1B [Lactobacillus gasseri ATCC 33323]
gi|420147086|ref|ZP_14654362.1| Dihydroorotate dehydrogenase (DHOD) [Lactobacillus gasseri CECT
5714]
gi|116095313|gb|ABJ60465.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus gasseri
ATCC 33323]
gi|398401087|gb|EJN54589.1| Dihydroorotate dehydrogenase (DHOD) [Lactobacillus gasseri CECT
5714]
Length = 311
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 115/183 (62%), Gaps = 16/183 (8%)
Query: 570 IMCTYNKDD---WLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + +D ++E++KK +G +ALE+N+SCP+ + + GM + G P++V +++
Sbjct: 103 IMASVGGEDEAGYVEVAKKLSDSGLVNALEINVSCPN-VNQGGM--SFGVHPDVVESLTK 159
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSAD-GNPWPAVG 684
+++ +P +VKLTPN+T+IT I+KAA +G ADG+S INT L+ + D P +G
Sbjct: 160 KIKAVTNVPIYVKLTPNVTDITQISKAAEKGGADGLSLINT---LLGMDIDIKTRKPVLG 216
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG A +P+ L+ V + + + PI+G+GGI SA ++F+ AGA+AV +
Sbjct: 217 ----HNIGGLSGEAVKPVALRMVHQV-RQSTSLPIIGMGGISSAQDVIKFMLAGANAVAV 271
Query: 745 CSA 747
+A
Sbjct: 272 GTA 274
>gi|320104613|ref|YP_004180204.1| dihydroorotate oxidase B, catalytic subunit [Isosphaera pallida
ATCC 43644]
gi|319751895|gb|ADV63655.1| dihydroorotate oxidase B, catalytic subunit [Isosphaera pallida
ATCC 43644]
Length = 348
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 103/174 (59%), Gaps = 11/174 (6%)
Query: 575 NKDDWLELSKKT-EKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKI 633
+ + + EL+ + + G A+ELNLSCP+ GL G +P V+ + R+ +
Sbjct: 143 SPEQFAELAGRVGSEPGVAAVELNLSCPN----VSHGLDLGIEPATVQRVVARCRAVCET 198
Query: 634 PFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
P + KLTPN+T+I +A+AA++G AD V+ INT+ GL + D W +GG
Sbjct: 199 PLWAKLTPNVTDIVPLARAAWDGGADAVTLINTLKGL---AVD---WRRRRPILANDFGG 252
Query: 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
+SG A +P+ L+ V + + P+ PI+G+GGI + D AL+F+ AGA AVQ+ +A
Sbjct: 253 LSGPAIKPVALRMVWEVHRALPSLPIVGVGGILTLDDALEFLVAGASAVQVGTA 306
>gi|58337655|ref|YP_194240.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus NCFM]
gi|81311432|sp|Q5FJB5.1|PYRDA_LACAC RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|58254972|gb|AAV43209.1| dihydroorotate dehydrogenase B, catalytic unit [Lactobacillus
acidophilus NCFM]
Length = 307
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 112/182 (61%), Gaps = 14/182 (7%)
Query: 570 IMCTYNKD---DWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
IM + D D++E++KK + +ALE+N+SCP+ + + GM + G P++V ++
Sbjct: 99 IMASVGGDSESDYVEVAKKLSDSDLVNALEINVSCPN-VAQGGM--SFGVHPDVVEELTK 155
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++ V +P +VKLTPN+T+I IA+AA +G ADG+S INTV G M + P +G
Sbjct: 156 KIKDVVDVPIYVKLTPNVTDIVAIAQAAEKGGADGISMINTVLG-MDIDVQTR-RPVLGH 213
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG A +P+ ++ +S + + PI+G+GGI SA+ ++F+ AGA AV +
Sbjct: 214 N----VGGLSGEAVKPIAIRMISQVYQNV-TLPIIGMGGISSAEDVIKFMLAGASAVAVG 268
Query: 746 SA 747
+A
Sbjct: 269 TA 270
>gi|346224179|ref|ZP_08845321.1| putative NADPH-dependent glutamate synthase [Anaerophaga
thermohalophila DSM 12881]
gi|346225416|ref|ZP_08846558.1| putative NADPH-dependent glutamate synthase [Anaerophaga
thermohalophila DSM 12881]
Length = 495
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 149/293 (50%), Gaps = 24/293 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V+ E+ +K++GVK E + + TI+ L+ +G+ F+G G
Sbjct: 211 IPEFRLPNSIVDVEINSLKEMGVKFETN-FIVGKTATIDDLKSEGFEGFFVGSGAG---- 265
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKES-LPILKG-TVIVLGAGDTA 159
+P F G+ E +G +S +L RV L G K+++ PILKG V V+G G+TA
Sbjct: 266 LPRFMGIPGENLVGVLSSNEYLTRV------NLMGANKEDTDTPILKGKRVAVIGGGNTA 319
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV------DV 213
D +ALR GA K ++++R+ + A EE++ A EE EFL +P++ V
Sbjct: 320 MDSVRTALRLGAEKAMIIYRRSEQEMPARIEEIKHAKEEGVEFLTLQNPIEYIGDEKGYV 379
Query: 214 KDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLD 272
+ ++ MQ + + + V L A+ ++ + G + N ++ +++ +K
Sbjct: 380 RQIRVQRMQLGEPDASGRRRPVPIPGSEYLLDADTVVVSVGVS--PNPLIPQSLPELKTT 437
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+ V+ + TSVP +F GGD T + ++ DG+ AA + + + ++
Sbjct: 438 DWHTLVVDEENLQTSVPFMFAGGDIVRGGATVILAMGDGRKAAEAMDRQLSKQ 490
>gi|410668489|ref|YP_006920860.1| formate:NAD(P)+ oxidoreductase [Thermacetogenium phaeum DSM 12270]
gi|409106236|gb|AFV12361.1| putative formate:NAD(P)+ oxidoreductase [Thermacetogenium phaeum
DSM 12270]
Length = 1158
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 41/295 (13%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGK----- 98
IP YRLP ++ E+ L+ ++GV+ C + DI+I+ LRK + AIF+ IG
Sbjct: 234 IPAYRLPKTVLDEEIRLIAEMGVRF-CYNTRLGSDISIDLLRKR-HDAIFLAIGAWKSSS 291
Query: 99 ---PNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGA 155
P N+ + G+ FL VA K + V V+G
Sbjct: 292 IRCPGENIPGVLGGID----------FLREVALHGKAEI------------GNVVAVIGG 329
Query: 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKD 215
G+TA D A +A+R GA +VL+++R+ + A +E+ A EE EF +SP+++ ++
Sbjct: 330 GNTAIDAARTAVRLGAERVLILYRRTKAEMPAEDKEIAEAEEEGVEFRFLVSPMEICARN 389
Query: 216 NKIAGMQFNRTEQNE-----KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVK 270
++ ++ + + E + V L + +I A G ++ + +
Sbjct: 390 GRVCAIRLQKMQLGEPDATGRRRPVPIPGAEETLPVDTVIRAIGQSVRPD----GLACFS 445
Query: 271 LDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
L K+G V+ TMAT +PGVF GGD +E+V G AA I Y+ +
Sbjct: 446 LTKWGTIAVDENTMATEIPGVFAGGDVVTGPSIAIEAVAQGIKAAHAISAYLNGR 500
>gi|95928251|ref|ZP_01310999.1| glutamate synthase (NADPH), homotetrameric [Desulfuromonas
acetoxidans DSM 684]
gi|95135522|gb|EAT17173.1| glutamate synthase (NADPH), homotetrameric [Desulfuromonas
acetoxidans DSM 684]
Length = 470
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 27/291 (9%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V+ EV ++ LGV+I+C + + +TI++L++D + A+ I N
Sbjct: 192 IPEFRLPKTIVDQEVARLEALGVEIQCN-VVVGKTLTIDQLKED-FDAVLIS----NGAG 245
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAF 160
+P+ + E G Y + +L RV G PI++G V V+GAG+TA
Sbjct: 246 LPMMMNIPGEHLKGVYAANEYLTRVNLMG----AGRLADSPTPIVQGKRVAVVGAGNTAM 301
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DC +A R GA + ++V+R+ + A EEV A E EF+ SP+++ D A
Sbjct: 302 DCVRTARRLGAEQAMIVYRRSEAQMPARREEVHHAKAEGVEFVMLSSPLEILGNDQGWA- 360
Query: 221 MQFNRTEQNEKGEWVEDEEQR--------IKLKANYIISAFGSTLLDNDVLEAIKP-VKL 271
R ++ GE QR + L + +++A G+ N +L A P ++L
Sbjct: 361 -TALRCQKMRLGEPDASGRQRPEPIDGETVDLAVDVVVNALGTR--PNPLLTATAPHLEL 417
Query: 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
G ++ T++PG++ GGD T + ++ DGK AA IH+ +
Sbjct: 418 QPSGQIRIDDDGQ-TNLPGIYAGGDITRGGSTVILAMGDGKRAAARIHQML 467
>gi|395241811|ref|ZP_10418814.1| Dihydroorotate dehydrogenase A (fumarate) [Lactobacillus pasteurii
CRBIP 24.76]
gi|394480825|emb|CCI85054.1| Dihydroorotate dehydrogenase A (fumarate) [Lactobacillus pasteurii
CRBIP 24.76]
Length = 305
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 113/184 (61%), Gaps = 14/184 (7%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
++ASI + +D++EL++K ++AG DALE+NLSCP+ + E GM G + ++V +
Sbjct: 97 MVASI-AGGSIEDYVELAEKIDQAGVIDALEVNLSCPN-VAEGGM--LFGINSKIVEQVI 152
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAV 683
++ + P + KLTPN+T+I +IA+AA G ADG+S INTV GL + + P +
Sbjct: 153 GQIKQKISRPVYAKLTPNVTDIAEIARAAQSGGADGLSLINTVYGLEIDIKTR---KPVL 209
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G GG+SG A +P+ L+ V + + PI+G+GGI SA+ ++F AGA AV
Sbjct: 210 GNNA----GGLSGKAVQPVALRMVHEVYEA-TKLPIIGMGGIYSAEDVVKFFLAGAQAVA 264
Query: 744 ICSA 747
I SA
Sbjct: 265 IGSA 268
>gi|336113726|ref|YP_004568493.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
2-6]
gi|335367156|gb|AEH53107.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
2-6]
Length = 324
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 106/172 (61%), Gaps = 11/172 (6%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D++ +S KA ALELN+SCP+ + G+A G DPEM ++ V++ ++P
Sbjct: 124 EDYVYVSDHLSKAPNVHALELNISCPN---VKSGGIAFGTDPEMAFELTRQVKAVSEVPV 180
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+T+I IAKAA G ADG++ INT+ G+ P A T GG+S
Sbjct: 181 YVKLSPNVTDIVAIAKAAASGGADGLTMINTLLGMKIDLKTARPVLANET------GGLS 234
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ ++ V +++ + PI+G+GGI +A+ A++F+ AGA AV I +A
Sbjct: 235 GPAVKPVAVRMVYEVSREV-DIPIIGMGGIMTAEDAVEFLYAGASAVAIGTA 285
>gi|329767645|ref|ZP_08259165.1| dihydroorotate dehydrogenase [Gemella haemolysans M341]
gi|328839072|gb|EGF88658.1| dihydroorotate dehydrogenase [Gemella haemolysans M341]
Length = 304
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
DD++ +++ KA ALELN+SCP HG G+ G DPE +N++ V+
Sbjct: 107 DDYVYVAEHISKAPNVHALELNISCPNVKHG------GIQFGTDPETAKNLTRKVKEVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA EG ADG++ INT+ G+ G P A G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEEGGADGITMINTLVGVRLDKKTGKPIIA------NVTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSA 747
G+SG A +P+ ++ V +++ N PI+G+GGI D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAVKPVAIRMVYQVSQAV-NIPIIGMGGIMDEWDV-IDFISAGASAVAVGTA 268
>gi|423682098|ref|ZP_17656937.1| dihydroorotate dehydrogenase 1B [Bacillus licheniformis WX-02]
gi|383438872|gb|EID46647.1| dihydroorotate dehydrogenase 1B [Bacillus licheniformis WX-02]
Length = 312
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 113/196 (57%), Gaps = 14/196 (7%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
++++E++++ KA ALELN+SCP+ + G+A G PEM ++ V+ +P
Sbjct: 105 EEYVEVAEEISKAPNVHALELNISCPN---VKTGGIAFGTQPEMAGELTKAVKEVASVPV 161
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKL+PN+ NITDIA A E ADG++ INT+ G+ G P A T GG+S
Sbjct: 162 YVKLSPNVANITDIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKT------GGLS 215
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT- 754
G A +P+ ++ V +++ + PI+G+GG+ SA+ L+F+ AGA AV + +A F
Sbjct: 216 GPAVKPVAIRMVHEVSQKV-SIPIIGMGGVQSAEDVLEFLLAGASAVAVGTANFVNPFAC 274
Query: 755 --VVDDYITGLQTLLY 768
++DD L+ Y
Sbjct: 275 PDIIDDLPRVLEKYGY 290
>gi|227891887|ref|ZP_04009692.1| dihydroorotate dehydrogenase 1B [Lactobacillus salivarius ATCC
11741]
gi|227866350|gb|EEJ73771.1| dihydroorotate dehydrogenase 1B [Lactobacillus salivarius ATCC
11741]
Length = 319
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 576 KDDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIP 634
+DD++E++ K ++G +ALELN+SCP+ + E GM A G PE+ ++ V+ +P
Sbjct: 115 EDDYVEVATKLSQSGMVNALELNISCPN-VHEGGM--AFGTVPEVAERLTKKVKEVSTVP 171
Query: 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694
+VKL+PN+T+I IAKA G ADG+S INTV G+ A G P GG+
Sbjct: 172 VYVKLSPNVTDIVAIAKAVERGGADGISMINTVLGMHIDVASGKPVLG------NIMGGL 225
Query: 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
SG A + + ++ + +++ + PI+G+GG+++ D L+ AGA AV + +A
Sbjct: 226 SGKAVKAIAIRMIYQVSQ-NTDLPIIGMGGVETVDDVLEMYMAGASAVAVGTA 277
>gi|89901572|ref|YP_524043.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118]
gi|89346309|gb|ABD70512.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens
T118]
Length = 608
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 25/287 (8%)
Query: 42 SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNA 101
++IP +RLP ++ E + DLGVK + + + + +++L GY A+F+G G P
Sbjct: 154 TQIPHFRLPESVIDEETGYILDLGVKFKNNQRVDS----MKELMTQGYDAVFVGCGAPRG 209
Query: 102 NVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161
V+ + E G + +L V+ + + VIVLG G+TA D
Sbjct: 210 RVLDLPGHKQAEAGIHIGIDWLASVSFGH------------VTSVGPRVIVLGGGNTAMD 257
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGM 221
C SA R G + V V+ R G ++A P E + A E + F P + KD K+ GM
Sbjct: 258 CCRSARRLGGSDVKVIVRSGFEEMKASPWEKEDAQHEGIPIINFHVPKSFNHKDGKLTGM 317
Query: 222 QFNRTEQ--NEKGE--WVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYG 275
F ++KG V E + + + ++ A G +N +E ++ DK+G
Sbjct: 318 TFEVVSAVYDDKGRRTLVPTGEPDVVFECDTVLVAVGQ---ENAFPWIERDTGIEFDKWG 374
Query: 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
P + T +SVP VF GGD A + +V G AA I +++
Sbjct: 375 LPVLGKDTFQSSVPRVFFGGDAAYGPKNIITAVAHGHEAAVSIDRFL 421
>gi|302344296|ref|YP_003808825.1| dihydroorotate dehydrogenase family protein [Desulfarculus baarsii
DSM 2075]
gi|301640909|gb|ADK86231.1| dihydroorotate dehydrogenase family protein [Desulfarculus baarsii
DSM 2075]
Length = 307
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 577 DDWLELSKKTEK-AGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
D++++L+++ + AG ALELN+SCP+ + G+A G +P+ V ++ VR +P
Sbjct: 109 DEFVQLAQRLDGLAGVAALELNVSCPN---VKAGGMAFGTNPQAVAQVTAAVRRVTSLPL 165
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+VKLTPN+T+ +A AA E AD + INT+ G+ + P + GG+S
Sbjct: 166 WVKLTPNVTDPVAVAGAAMEAGADALCLINTLLGMAIDARRRAP------RLANVVGGLS 219
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+GL+ V +A+ P PI+G+GGI + A +++ AGA AVQ+ +A
Sbjct: 220 GPAIKPVGLRMVWQVARALPGAPIIGLGGICCGEDAAEYLLAGASAVQVGTA 271
>gi|317056664|ref|YP_004105131.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus albus 7]
gi|315448933|gb|ADU22497.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus albus 7]
Length = 464
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 153/294 (52%), Gaps = 25/294 (8%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP V E++ + +GVKI + + +++++L + GY A+F+G G
Sbjct: 182 IPEFRLPKMIVQHEIDNLSKMGVKIMTNMVIG-KVLSVDELFEMGYEAVFVGSGAG---- 236
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKE-SLPILKGT-VIVLGAGDTA 159
+P F G+ E +G Y++ +L R+ L KKE + PI+K V V+G G+ A
Sbjct: 237 LPRFMGIDGEGLIGVYSANEYLTRI------NLMKAYKKEYATPIMKSQKVAVVGGGNVA 290
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KI 218
D A SALR GA KV VV+R+ + A EEV A EE EFL +PV++ DN ++
Sbjct: 291 MDAARSALRIGAKKVYVVYRRSMDELPARKEEVHHAMEEGVEFLTLNNPVELLGDDNGRV 350
Query: 219 AGMQFNRTEQNEKGEW-----VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLD 272
M + E E E V E +L + +I A G++ N ++ P + ++
Sbjct: 351 RAMVCKKMELGEADESGRRSPVAVEGSDYELDVDTVIMAIGTS--PNPLIRNTTPGLDVN 408
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
K G V+ T AT+ GV+ GGD + T + ++ GK AA I YI+++N
Sbjct: 409 KRGCLIVD-DTEATTKKGVYAGGDAVTGAATVILAMGAGKKAAAAIDAYIKDQN 461
>gi|19703766|ref|NP_603328.1| dihydroorotate dehydrogenase 1B [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|30173330|sp|Q8RG85.1|PYRDB_FUSNN RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|19713904|gb|AAL94627.1| Dihydroorotate dehydrogenase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 304
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 105/176 (59%), Gaps = 19/176 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
+D++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 EDYVYVANKISKSPNVKALELNISCPNVKHG------GIQFGTDPNVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVETGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSA 747
G+SG A RP+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIRPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTA 268
>gi|159110124|ref|XP_001705324.1| Glutamate synthase [Giardia lamblia ATCC 50803]
gi|157433406|gb|EDO77650.1| Glutamate synthase [Giardia lamblia ATCC 50803]
Length = 910
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 16/293 (5%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIG--IGKPNA 101
IP++RLP V E+ VK LG+ +++ +D+TI +L+ +GYTAIFIG +G P +
Sbjct: 577 IPKFRLPKQIVAHEINSVKRLGLVDIKTKTVVGKDVTIPQLQSEGYTAIFIGTGVGIPRS 636
Query: 102 NVIPIFQGLTEEM-GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160
IP E++ G +T+ FL R + +S K V+V+G G+ A
Sbjct: 637 LGIP-----GEDLPGVFTANEFLKRCNLEDNCVFPFISRADSNEPRK-KVVVIGCGNVAM 690
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCA+SA R GA+ V+VV+R+ + A EE++ A E F SP+++ D++ G
Sbjct: 691 DCASSARRLGAD-VVVVYRRRLQDSPARFEEIESAEAEGVYFATLNSPLEIIPNDSR-TG 748
Query: 221 MQFNRTEQN--EKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
++ R + N E G V + + + II A G +N +++ + +K++ G
Sbjct: 749 IKGLRCQVNSFEAGAIVPLDGEFSFFACSMIIVAVGFGP-NNIIVKTTENLKINDKGL-V 806
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVP 331
+ TSVPGVFC GD + T ++++ +GK A ++ +I + N+ T+P
Sbjct: 807 ITDENFETSVPGVFCAGDVQTGAATVIKALGNGKVAGQSMNFWIAQ-NHATLP 858
>gi|294782717|ref|ZP_06748043.1| dihydroorotate oxidase [Fusobacterium sp. 1_1_41FAA]
gi|294481358|gb|EFG29133.1| dihydroorotate oxidase [Fusobacterium sp. 1_1_41FAA]
Length = 304
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
+D++ ++ K K ALELN+SCP HG G+ G DP++ RN++ V++
Sbjct: 107 EDYVYVADKISKVPNVKALELNISCPNVKHG------GIQFGTDPDVARNLTEKVKAVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEAGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ + L L LKG
Sbjct: 273 PFVCPKIIDNLESALDKLGVNHILDLKG 300
>gi|254304287|ref|ZP_04971645.1| dihydroorotate oxidase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|422340051|ref|ZP_16421006.1| dihydroorotate oxidase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|148324479|gb|EDK89729.1| dihydroorotate oxidase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|355370296|gb|EHG17681.1| dihydroorotate oxidase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 305
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 22/208 (10%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCP---HGMGERGMGLACGQDPEMVRNISLWVRSSVK 632
+D++ ++ K K+ ALELN+SCP HG G+ G DP + RN++ V++
Sbjct: 107 EDYVYVADKISKSPNVKALELNISCPNVKHG------GIQFGTDPNVARNLTEKVKTVSS 160
Query: 633 IPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692
+P +VKL+PN+T+I +AKA G ADG++ INT+ G++ G P A T G
Sbjct: 161 VPVYVKLSPNVTDIVAMAKAVEAGGADGLTMINTLVGIVLDRKTGKPIIA------NTTG 214
Query: 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGI-DSADVALQFIQAGAHAVQICSAVQNQ 751
G+SG A +P+ ++ V +A+ N PI+G+GG+ D DV + FI AGA AV + +A
Sbjct: 215 GLSGPAIKPVAIRMVYQVAQAV-NIPIIGMGGVMDEWDV-IDFISAGASAVAVGTANFTD 272
Query: 752 DFT---VVDDYITGLQTLLYLKSTQLKG 776
F ++D+ + L L LKG
Sbjct: 273 PFVCPKIIDNLESALDKLGVNHILDLKG 300
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,182,907,673
Number of Sequences: 23463169
Number of extensions: 560884775
Number of successful extensions: 1563383
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4737
Number of HSP's successfully gapped in prelim test: 7038
Number of HSP's that attempted gapping in prelim test: 1535012
Number of HSP's gapped (non-prelim): 20546
length of query: 842
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 691
effective length of database: 8,816,256,848
effective search space: 6092033481968
effective search space used: 6092033481968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)