Query psy16199
Match_columns 842
No_of_seqs 660 out of 4675
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 23:18:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gte_A Dihydropyrimidine dehyd 100.0 3.9E-86 1.3E-90 826.3 59.6 683 25-823 210-895 (1025)
2 3i65_A Dihydroorotate dehydrog 100.0 1.1E-49 3.7E-54 438.7 21.3 288 463-780 90-410 (415)
3 4ef8_A Dihydroorotate dehydrog 100.0 8.2E-49 2.8E-53 427.5 21.9 289 463-780 43-342 (354)
4 3zwt_A Dihydroorotate dehydrog 100.0 8.3E-48 2.9E-52 423.2 23.0 290 463-780 56-363 (367)
5 3oix_A Putative dihydroorotate 100.0 7.9E-47 2.7E-51 411.0 20.9 290 463-780 44-340 (345)
6 3tjx_A Dihydroorotate dehydrog 100.0 6.8E-46 2.3E-50 410.5 22.2 290 462-780 42-342 (354)
7 1tv5_A Dhodehase, dihydroorota 100.0 7.4E-45 2.5E-49 406.6 21.3 288 463-780 88-438 (443)
8 1jub_A Dihydroorotate dehydrog 100.0 4.4E-40 1.5E-44 358.5 23.3 291 463-780 8-307 (311)
9 2e6f_A Dihydroorotate dehydrog 100.0 2.8E-38 9.5E-43 344.8 23.7 302 345-780 1-309 (314)
10 2vdc_G Glutamate synthase [NAD 100.0 2.5E-35 8.6E-40 337.0 23.4 294 25-325 145-446 (456)
11 1f76_A Dihydroorotate dehydrog 100.0 2.2E-34 7.6E-39 316.7 21.0 264 463-763 51-336 (336)
12 1ep3_A Dihydroorotate dehydrog 100.0 3.9E-33 1.3E-37 304.0 21.0 301 344-780 3-305 (311)
13 4a5l_A Thioredoxin reductase; 100.0 1.1E-28 3.7E-33 268.2 16.4 267 24-324 26-313 (314)
14 4gcm_A TRXR, thioredoxin reduc 100.0 6.3E-28 2.2E-32 262.5 20.2 265 24-325 28-308 (312)
15 3f8d_A Thioredoxin reductase ( 99.9 3.9E-26 1.3E-30 248.5 25.6 265 24-326 37-320 (323)
16 2q0l_A TRXR, thioredoxin reduc 99.9 1.7E-26 5.9E-31 250.6 22.2 266 24-324 23-310 (311)
17 1cjc_A Protein (adrenodoxin re 99.9 5.5E-27 1.9E-31 268.6 18.5 283 25-324 31-396 (460)
18 3r9u_A Thioredoxin reductase; 99.9 2.8E-26 9.5E-31 248.9 21.9 266 24-325 26-314 (315)
19 3itj_A Thioredoxin reductase 1 99.9 2.3E-26 8E-31 252.0 21.0 267 24-324 44-336 (338)
20 2q7v_A Thioredoxin reductase; 99.9 3.6E-26 1.2E-30 250.0 21.5 264 24-325 30-314 (325)
21 1lqt_A FPRA; NADP+ derivative, 99.9 5.9E-27 2E-31 268.1 15.4 281 25-324 33-388 (456)
22 1fl2_A Alkyl hydroperoxide red 99.9 5.2E-26 1.8E-30 246.7 20.0 264 24-325 23-307 (310)
23 3cty_A Thioredoxin reductase; 99.9 4.8E-26 1.6E-30 248.3 19.6 264 24-324 38-317 (319)
24 3lzw_A Ferredoxin--NADP reduct 99.9 6.2E-26 2.1E-30 248.0 18.5 262 24-325 29-317 (332)
25 4fk1_A Putative thioredoxin re 99.9 4.7E-26 1.6E-30 246.9 15.8 257 24-325 28-302 (304)
26 3lxd_A FAD-dependent pyridine 99.9 1.6E-25 5.6E-30 253.6 20.7 284 25-356 32-346 (415)
27 1vdc_A NTR, NADPH dependent th 99.9 3.2E-25 1.1E-29 243.1 22.2 271 24-325 30-325 (333)
28 2a87_A TRXR, TR, thioredoxin r 99.9 1.5E-25 5E-30 246.4 18.4 265 24-325 36-318 (335)
29 2zbw_A Thioredoxin reductase; 99.9 2.2E-25 7.5E-30 244.6 18.3 264 24-325 27-319 (335)
30 2qae_A Lipoamide, dihydrolipoy 99.9 9.3E-26 3.2E-30 259.7 15.0 224 58-319 100-338 (468)
31 3fg2_P Putative rubredoxin red 99.9 2.6E-25 9E-30 251.0 18.4 284 24-356 23-335 (404)
32 1ebd_A E3BD, dihydrolipoamide 99.9 2.8E-25 9.5E-30 254.8 18.0 222 58-319 98-331 (455)
33 1trb_A Thioredoxin reductase; 99.9 7.6E-25 2.6E-29 238.5 19.9 265 24-325 27-316 (320)
34 3ef6_A Toluene 1,2-dioxygenase 99.9 1.6E-25 5.6E-30 253.2 14.8 284 25-356 25-334 (410)
35 3kd9_A Coenzyme A disulfide re 99.9 1.3E-24 4.4E-29 248.8 21.9 268 15-319 18-313 (449)
36 1hyu_A AHPF, alkyl hydroperoxi 99.9 8.1E-25 2.8E-29 254.9 20.1 264 24-325 234-518 (521)
37 3ic9_A Dihydrolipoamide dehydr 99.9 1.1E-25 3.7E-30 260.6 12.4 207 77-321 125-338 (492)
38 2wpf_A Trypanothione reductase 99.9 2.7E-25 9.1E-30 257.4 15.6 218 59-319 115-353 (495)
39 3oc4_A Oxidoreductase, pyridin 99.9 1.9E-25 6.6E-30 255.9 14.1 266 15-319 17-312 (452)
40 1ges_A Glutathione reductase; 99.9 5.6E-25 1.9E-29 251.9 17.8 217 59-319 101-326 (450)
41 1dxl_A Dihydrolipoamide dehydr 99.9 1.7E-25 5.7E-30 257.7 13.5 225 58-319 103-340 (470)
42 1zmd_A Dihydrolipoyl dehydroge 99.9 2.3E-25 8E-30 256.8 14.7 226 58-319 104-343 (474)
43 1fec_A Trypanothione reductase 99.9 1.9E-25 6.6E-30 258.3 14.0 218 59-319 111-349 (490)
44 2eq6_A Pyruvate dehydrogenase 99.9 2.6E-25 8.9E-30 255.6 14.9 222 59-319 101-332 (464)
45 3iwa_A FAD-dependent pyridine 99.9 3E-24 1E-28 247.4 23.4 269 15-319 18-327 (472)
46 3klj_A NAD(FAD)-dependent dehy 99.9 1.9E-25 6.4E-30 250.3 12.3 272 22-356 29-320 (385)
47 3lad_A Dihydrolipoamide dehydr 99.9 1.2E-24 4.2E-29 250.9 19.5 222 59-319 107-341 (476)
48 2a8x_A Dihydrolipoyl dehydroge 99.9 8.5E-25 2.9E-29 251.4 17.9 222 58-319 98-332 (464)
49 3urh_A Dihydrolipoyl dehydroge 99.9 6.1E-25 2.1E-29 254.4 16.2 223 59-319 123-361 (491)
50 3ab1_A Ferredoxin--NADP reduct 99.9 1.9E-24 6.5E-29 239.9 19.5 262 24-324 36-329 (360)
51 3l8k_A Dihydrolipoyl dehydroge 99.9 2.4E-25 8.4E-30 256.0 12.7 224 59-319 97-331 (466)
52 1xdi_A RV3303C-LPDA; reductase 99.9 1.7E-24 5.9E-29 251.1 19.6 221 57-319 101-340 (499)
53 3ntd_A FAD-dependent pyridine 99.9 3.7E-24 1.3E-28 252.2 22.2 269 15-319 16-336 (565)
54 2cdu_A NADPH oxidase; flavoenz 99.9 1.7E-24 5.9E-29 248.0 18.9 266 16-319 16-315 (452)
55 1zk7_A HGII, reductase, mercur 99.9 6.3E-25 2.2E-29 252.7 15.1 217 59-319 102-332 (467)
56 1v59_A Dihydrolipoamide dehydr 99.9 1E-24 3.4E-29 251.8 16.6 225 58-320 103-349 (478)
57 4eqs_A Coenzyme A disulfide re 99.9 5.5E-25 1.9E-29 250.8 14.1 261 15-319 15-309 (437)
58 2hqm_A GR, grase, glutathione 99.9 1.4E-24 4.8E-29 250.5 17.5 219 59-319 113-345 (479)
59 2r9z_A Glutathione amide reduc 99.9 4.2E-24 1.4E-28 245.4 21.0 217 59-319 100-325 (463)
60 1onf_A GR, grase, glutathione 99.9 2.7E-24 9.1E-29 249.5 19.5 217 59-319 97-369 (500)
61 3dk9_A Grase, GR, glutathione 99.9 3.4E-24 1.2E-28 247.3 20.3 222 59-319 116-354 (478)
62 1mo9_A ORF3; nucleotide bindin 99.9 2.8E-24 9.4E-29 250.7 19.6 220 62-319 146-376 (523)
63 1ojt_A Surface protein; redox- 99.9 1.1E-24 3.6E-29 251.8 15.3 221 59-319 103-347 (482)
64 3cgb_A Pyridine nucleotide-dis 99.9 3.8E-24 1.3E-28 247.0 19.5 267 16-319 52-351 (480)
65 3fbs_A Oxidoreductase; structu 99.9 8.4E-24 2.9E-28 227.3 19.0 254 24-325 24-294 (297)
66 1q1r_A Putidaredoxin reductase 99.9 7.1E-24 2.4E-28 241.3 19.3 251 58-356 67-344 (431)
67 1lvl_A Dihydrolipoamide dehydr 99.9 1.8E-24 6E-29 248.3 13.7 215 59-319 104-328 (458)
68 2bc0_A NADH oxidase; flavoprot 99.9 2.2E-24 7.5E-29 249.6 14.5 259 25-319 61-359 (490)
69 4dna_A Probable glutathione re 99.9 2.6E-24 9E-29 247.3 14.5 219 57-319 99-329 (463)
70 2gqw_A Ferredoxin reductase; f 99.9 8.1E-24 2.8E-28 239.1 17.0 242 60-355 68-333 (408)
71 3o0h_A Glutathione reductase; 99.9 2.3E-24 8E-29 249.0 12.8 220 57-320 120-350 (484)
72 1nhp_A NADH peroxidase; oxidor 99.9 4.4E-24 1.5E-28 244.3 14.4 269 15-319 15-314 (447)
73 3ics_A Coenzyme A-disulfide re 99.9 1.9E-23 6.4E-28 247.3 19.2 270 15-319 51-351 (588)
74 3dgz_A Thioredoxin reductase 2 99.9 1.6E-23 5.5E-28 242.3 18.1 222 60-319 113-350 (488)
75 1xhc_A NADH oxidase /nitrite r 99.9 4.2E-24 1.4E-28 237.9 11.6 248 24-319 30-295 (367)
76 2yqu_A 2-oxoglutarate dehydrog 99.9 1.3E-23 4.5E-28 240.9 16.0 221 58-320 96-326 (455)
77 3qfa_A Thioredoxin reductase 1 99.9 3.3E-23 1.1E-27 241.2 16.5 221 60-319 139-378 (519)
78 3dgh_A TRXR-1, thioredoxin red 99.9 6.6E-23 2.3E-27 236.8 18.4 220 61-319 118-350 (483)
79 3b0p_A TRNA-dihydrouridine syn 99.9 5.2E-23 1.8E-27 226.2 16.1 175 564-763 58-242 (350)
80 4b1b_A TRXR, thioredoxin reduc 99.9 9.2E-23 3.1E-27 237.0 19.1 221 59-319 148-382 (542)
81 1p0k_A Isopentenyl-diphosphate 99.9 2.5E-22 8.7E-27 221.5 20.6 216 564-804 117-343 (349)
82 2v3a_A Rubredoxin reductase; a 99.9 1.6E-22 5.5E-27 226.6 17.8 262 18-319 22-304 (384)
83 2x8g_A Thioredoxin glutathione 99.9 1.5E-22 5.1E-27 240.1 16.4 220 61-320 216-458 (598)
84 4a9w_A Monooxygenase; baeyer-v 99.9 1.5E-22 5.2E-27 223.0 15.4 255 24-324 25-353 (357)
85 2gag_A Heterotetrameric sarcos 99.9 2.7E-22 9.3E-27 248.9 16.7 259 25-323 151-444 (965)
86 1o94_A Tmadh, trimethylamine d 99.9 1E-22 3.5E-27 246.1 11.5 259 25-322 412-699 (729)
87 3k30_A Histamine dehydrogenase 99.9 7.2E-22 2.5E-26 237.7 16.6 246 25-325 414-677 (690)
88 1vhn_A Putative flavin oxidore 99.9 1.2E-21 4E-26 213.2 15.6 168 564-763 59-230 (318)
89 4g6h_A Rotenone-insensitive NA 99.9 1.2E-21 4.2E-26 226.6 16.3 214 86-322 155-400 (502)
90 1m6i_A Programmed cell death p 99.9 5.7E-22 1.9E-26 229.4 10.9 237 63-344 102-367 (493)
91 3sx6_A Sulfide-quinone reducta 99.8 1.1E-21 3.9E-26 223.6 11.4 274 23-325 28-346 (437)
92 2xve_A Flavin-containing monoo 99.8 1.3E-20 4.5E-25 216.2 18.1 217 51-319 101-337 (464)
93 3d1c_A Flavin-containing putat 99.8 2.9E-20 1E-24 206.4 20.3 226 52-322 89-338 (369)
94 3vrd_B FCCB subunit, flavocyto 99.8 1.2E-20 4E-25 212.6 11.2 275 16-325 18-326 (401)
95 1z41_A YQJM, probable NADH-dep 99.8 1.5E-18 5E-23 190.2 25.3 164 576-764 143-325 (338)
96 3h8l_A NADH oxidase; membrane 99.8 4.9E-20 1.7E-24 208.1 13.5 260 22-323 24-336 (409)
97 1ps9_A 2,4-dienoyl-COA reducta 99.8 3.6E-19 1.2E-23 213.6 21.4 230 25-318 396-671 (671)
98 3h28_A Sulfide-quinone reducta 99.8 1.4E-20 4.7E-25 214.2 8.2 273 16-325 18-335 (430)
99 3hyw_A Sulfide-quinone reducta 99.8 4.3E-20 1.5E-24 210.0 9.6 276 15-325 17-335 (430)
100 3gr7_A NADPH dehydrogenase; fl 99.8 9.6E-19 3.3E-23 191.1 19.8 164 576-764 143-325 (340)
101 3sr7_A Isopentenyl-diphosphate 99.8 6.9E-19 2.4E-23 192.3 18.5 196 564-780 145-351 (365)
102 1y56_A Hypothetical protein PH 99.8 2.3E-19 7.7E-24 207.5 14.6 226 26-322 131-376 (493)
103 3hgj_A Chromate reductase; TIM 99.8 1.3E-17 4.5E-22 183.2 18.5 165 576-764 151-336 (349)
104 2gv8_A Monooxygenase; FMO, FAD 99.8 1.8E-18 6.3E-23 197.6 12.0 215 52-319 116-358 (447)
105 3vkj_A Isopentenyl-diphosphate 99.7 5.8E-19 2E-23 193.8 6.9 220 564-804 120-358 (368)
106 3s5w_A L-ornithine 5-monooxyge 99.7 8.6E-18 2.9E-22 192.8 16.4 237 52-320 128-446 (463)
107 2nzl_A Hydroxyacid oxidase 1; 99.7 6.2E-17 2.1E-21 179.6 21.2 187 564-780 147-380 (392)
108 2ywl_A Thioredoxin reductase r 99.7 2.3E-17 8E-22 164.0 15.8 152 149-325 3-173 (180)
109 3sgz_A Hydroxyacid oxidase 2; 99.7 3.9E-17 1.3E-21 176.8 18.6 187 564-780 122-345 (352)
110 2nli_A Lactate oxidase; flavoe 99.7 2.6E-17 8.9E-22 181.4 16.4 187 564-780 133-357 (368)
111 3kru_A NADH:flavin oxidoreduct 99.7 3.7E-17 1.3E-21 178.1 16.3 159 576-760 142-321 (343)
112 1kbi_A Cytochrome B2, L-LCR; f 99.7 8.9E-17 3E-21 184.1 20.0 186 564-780 247-476 (511)
113 1gox_A (S)-2-hydroxy-acid oxid 99.7 1.7E-16 5.7E-21 175.7 19.2 187 564-780 123-353 (370)
114 2gou_A Oxidoreductase, FMN-bin 99.7 6.4E-17 2.2E-21 178.4 15.7 156 576-762 160-338 (365)
115 1o94_A Tmadh, trimethylamine d 99.7 1.8E-16 6.2E-21 191.5 19.5 167 576-762 148-337 (729)
116 3l5l_A Xenobiotic reductase A; 99.7 1.2E-16 4.1E-21 176.4 16.4 165 576-764 157-343 (363)
117 2r14_A Morphinone reductase; H 99.7 1.9E-16 6.5E-21 175.1 15.9 157 576-762 165-344 (377)
118 2hsa_B 12-oxophytodienoate red 99.7 2.7E-16 9.3E-21 175.1 17.0 166 576-762 170-364 (402)
119 4ab4_A Xenobiotic reductase B; 99.7 1.8E-16 6.2E-21 173.6 15.0 151 576-763 152-325 (362)
120 1vyr_A Pentaerythritol tetrani 99.7 4E-16 1.4E-20 172.0 17.7 156 576-762 160-339 (364)
121 1vcf_A Isopentenyl-diphosphate 99.7 4.3E-16 1.5E-20 170.3 17.8 197 564-780 118-328 (332)
122 3gka_A N-ethylmaleimide reduct 99.7 2.1E-16 7.1E-21 173.1 15.1 151 576-763 160-333 (361)
123 1ps9_A 2,4-dienoyl-COA reducta 99.7 2.7E-15 9.4E-20 179.9 22.5 168 576-764 140-328 (671)
124 3l5a_A NADH/flavin oxidoreduct 99.7 5E-16 1.7E-20 173.6 14.7 167 576-764 169-364 (419)
125 1ypf_A GMP reductase; GUAC, pu 99.6 1.6E-14 5.4E-19 157.9 24.9 176 565-779 96-319 (336)
126 1icp_A OPR1, 12-oxophytodienoa 99.6 6.6E-16 2.3E-20 170.8 13.5 158 576-762 166-346 (376)
127 1p4c_A L(+)-mandelate dehydrog 99.6 5.3E-15 1.8E-19 164.0 20.2 133 616-780 209-351 (380)
128 3aty_A Tcoye, prostaglandin F2 99.6 4.5E-15 1.5E-19 164.1 17.1 156 575-763 172-353 (379)
129 3gwf_A Cyclohexanone monooxyge 99.6 1E-14 3.6E-19 169.9 18.4 140 24-182 31-212 (540)
130 1eep_A Inosine 5'-monophosphat 99.5 1.8E-13 6.1E-18 153.7 21.3 178 564-780 142-381 (404)
131 3k30_A Histamine dehydrogenase 99.5 1.1E-14 3.8E-19 175.1 11.5 165 576-763 155-341 (690)
132 3tjl_A NADPH dehydrogenase; OL 99.5 6.4E-14 2.2E-18 154.7 10.3 161 576-763 166-363 (407)
133 3uox_A Otemo; baeyer-villiger 99.5 4.1E-13 1.4E-17 156.6 17.4 146 24-182 31-219 (545)
134 4ap3_A Steroid monooxygenase; 99.4 4E-13 1.4E-17 156.8 15.2 140 24-182 43-225 (549)
135 2qr6_A IMP dehydrogenase/GMP r 99.4 1.9E-12 6.6E-17 144.7 19.4 176 564-779 156-387 (393)
136 1w4x_A Phenylacetone monooxyge 99.4 3.8E-12 1.3E-16 148.7 21.6 141 24-182 38-220 (542)
137 1mzh_A Deoxyribose-phosphate a 99.4 1.8E-12 6E-17 133.3 13.0 123 583-747 76-206 (225)
138 3r2g_A Inosine 5'-monophosphat 99.4 1.9E-11 6.6E-16 132.8 20.7 165 576-780 98-317 (361)
139 1jcn_A Inosine monophosphate d 99.4 8.9E-12 3.1E-16 144.3 18.3 171 573-780 251-482 (514)
140 2c6q_A GMP reductase 2; TIM ba 99.3 2.1E-11 7.1E-16 133.5 19.2 178 565-780 108-340 (351)
141 2cul_A Glucose-inhibited divis 99.3 2.7E-12 9.2E-17 133.0 10.6 155 149-322 5-231 (232)
142 4a3u_A NCR, NADH\:flavin oxido 99.3 1.2E-11 4E-16 136.1 13.7 159 576-763 151-332 (358)
143 2z6i_A Trans-2-enoyl-ACP reduc 99.3 4.4E-11 1.5E-15 130.5 16.4 134 564-751 64-197 (332)
144 4ef8_A Dihydroorotate dehydrog 99.3 3.1E-11 1E-15 131.5 14.9 255 342-663 31-305 (354)
145 3zwt_A Dihydroorotate dehydrog 99.3 9E-11 3.1E-15 128.9 18.3 263 344-663 46-326 (367)
146 3khj_A Inosine-5-monophosphate 99.3 1.7E-10 5.7E-15 126.6 20.0 146 564-750 96-241 (361)
147 1vrd_A Inosine-5'-monophosphat 99.2 8.6E-11 2.9E-15 135.4 16.9 168 577-780 236-462 (494)
148 4fxs_A Inosine-5'-monophosphat 99.2 6.7E-11 2.3E-15 135.5 15.3 174 565-780 221-458 (496)
149 1ofd_A Ferredoxin-dependent gl 99.2 7.5E-11 2.6E-15 146.0 16.3 147 615-780 1010-1199(1520)
150 4avf_A Inosine-5'-monophosphat 99.2 1.1E-10 3.6E-15 133.7 16.6 174 566-780 220-459 (490)
151 3bo9_A Putative nitroalkan dio 99.2 1.4E-10 5E-15 126.0 16.7 134 564-751 78-211 (326)
152 1ea0_A Glutamate synthase [NAD 99.2 1.3E-10 4.5E-15 143.6 17.7 148 615-781 975-1165(1479)
153 1geq_A Tryptophan synthase alp 99.2 1.4E-10 4.9E-15 121.2 14.5 201 564-767 5-245 (248)
154 3usb_A Inosine-5'-monophosphat 99.2 3.5E-10 1.2E-14 130.0 17.8 176 565-779 246-480 (511)
155 3oix_A Putative dihydroorotate 99.2 2.2E-10 7.5E-15 124.5 15.1 85 342-437 32-116 (345)
156 2gjl_A Hypothetical protein PA 99.2 3.8E-10 1.3E-14 123.1 16.8 138 564-751 68-207 (328)
157 3i65_A Dihydroorotate dehydrog 99.1 4.9E-10 1.7E-14 123.6 16.0 261 346-663 82-373 (415)
158 2nv1_A Pyridoxal biosynthesis 99.1 2.5E-10 8.6E-15 123.1 13.3 200 564-780 22-276 (305)
159 4gbu_A NADPH dehydrogenase 1; 99.1 3.7E-10 1.3E-14 126.0 13.8 164 576-763 171-365 (400)
160 1rd5_A Tryptophan synthase alp 99.1 4.8E-10 1.7E-14 118.2 13.9 185 564-750 18-235 (262)
161 2zbt_A Pyridoxal biosynthesis 99.1 3.2E-10 1.1E-14 121.8 12.1 201 564-780 22-276 (297)
162 4b63_A L-ornithine N5 monooxyg 99.1 3.5E-09 1.2E-13 122.3 19.9 243 52-315 146-480 (501)
163 4fo4_A Inosine 5'-monophosphat 99.1 3.8E-09 1.3E-13 115.6 18.5 133 578-749 108-244 (366)
164 3o07_A Pyridoxine biosynthesis 99.0 6.9E-10 2.4E-14 113.3 10.8 184 565-764 13-250 (291)
165 3ffs_A Inosine-5-monophosphate 99.0 3.1E-09 1.1E-13 117.2 15.7 132 580-749 146-279 (400)
166 1qop_A Tryptophan synthase alp 99.0 9.6E-09 3.3E-13 108.5 18.5 181 564-750 17-239 (268)
167 3bw2_A 2-nitropropane dioxygen 99.0 7.3E-09 2.5E-13 114.7 18.0 128 579-755 111-246 (369)
168 2y88_A Phosphoribosyl isomeras 99.0 2.4E-09 8.3E-14 111.6 12.7 152 564-763 75-242 (244)
169 1xm3_A Thiazole biosynthesis p 99.0 3.5E-08 1.2E-12 103.7 20.7 157 565-764 67-228 (264)
170 3fpz_A Thiazole biosynthetic e 99.0 1.6E-12 5.5E-17 141.9 -13.2 235 15-323 80-325 (326)
171 1zfj_A Inosine monophosphate d 98.9 1.1E-08 3.7E-13 117.9 17.8 167 577-779 232-460 (491)
172 3vnd_A TSA, tryptophan synthas 98.9 1.2E-08 4E-13 106.8 16.3 186 564-750 18-240 (267)
173 3q58_A N-acetylmannosamine-6-p 98.9 9.7E-09 3.3E-13 105.4 14.9 131 585-762 96-226 (229)
174 3igs_A N-acetylmannosamine-6-p 98.9 1.5E-08 5.2E-13 104.3 16.0 134 584-764 95-228 (232)
175 1wa3_A 2-keto-3-deoxy-6-phosph 98.9 1.7E-08 5.9E-13 102.2 15.0 164 564-750 10-183 (205)
176 3nav_A Tryptophan synthase alp 98.9 1.4E-08 4.8E-13 106.3 14.4 186 564-750 20-242 (271)
177 2ekc_A AQ_1548, tryptophan syn 98.9 7E-08 2.4E-12 101.3 19.8 183 564-751 17-240 (262)
178 2agk_A 1-(5-phosphoribosyl)-5- 98.9 3.6E-09 1.2E-13 110.8 9.8 153 564-764 77-257 (260)
179 2yzr_A Pyridoxal biosynthesis 98.9 9.7E-09 3.3E-13 108.3 11.9 185 564-764 18-292 (330)
180 4adt_A Pyridoxine biosynthetic 98.9 3.8E-08 1.3E-12 104.3 16.6 188 581-779 32-275 (297)
181 1h5y_A HISF; histidine biosynt 98.9 3.3E-08 1.1E-12 103.1 16.1 158 564-772 78-249 (253)
182 1thf_D HISF protein; thermophI 98.8 5.5E-08 1.9E-12 101.8 16.6 153 564-763 75-241 (253)
183 1vzw_A Phosphoribosyl isomeras 98.8 3.4E-08 1.2E-12 102.9 14.8 153 564-763 76-239 (244)
184 1jub_A Dihydroorotate dehydrog 98.8 3.8E-08 1.3E-12 106.3 15.5 246 348-663 2-270 (311)
185 3tdn_A FLR symmetric alpha-bet 98.8 1.1E-09 3.9E-14 114.3 3.0 153 564-763 80-246 (247)
186 1me8_A Inosine-5'-monophosphat 98.8 4.9E-08 1.7E-12 112.3 16.3 165 577-779 241-471 (503)
187 1rp0_A ARA6, thiazole biosynth 98.8 6.6E-09 2.2E-13 110.9 8.3 171 149-324 41-276 (284)
188 2w6r_A Imidazole glycerol phos 98.8 5.3E-08 1.8E-12 102.7 14.9 165 564-777 75-256 (266)
189 1tv5_A Dhodehase, dihydroorota 98.8 2.1E-07 7.1E-12 104.2 19.6 288 346-663 80-401 (443)
190 1wv2_A Thiazole moeity, thiazo 98.8 8.5E-07 2.9E-11 90.2 21.9 158 565-764 75-237 (265)
191 1ka9_F Imidazole glycerol phos 98.7 1.7E-07 5.7E-12 98.0 16.9 153 564-763 76-242 (252)
192 3vk5_A MOEO5; TIM barrel, tran 98.7 3.1E-07 1.1E-11 94.9 18.0 171 575-761 51-273 (286)
193 1ujp_A Tryptophan synthase alp 98.7 1.9E-07 6.4E-12 98.2 16.1 195 564-767 16-253 (271)
194 1y0e_A Putative N-acetylmannos 98.7 1.2E-07 4.1E-12 97.2 14.4 125 585-750 83-209 (223)
195 1jvn_A Glutamine, bifunctional 98.7 4.1E-08 1.4E-12 114.1 11.0 156 579-764 349-544 (555)
196 2v82_A 2-dehydro-3-deoxy-6-pho 98.7 2.1E-07 7E-12 94.7 14.5 166 564-751 7-182 (212)
197 2qjg_A Putative aldolase MJ040 98.6 3.9E-07 1.3E-11 96.4 14.2 156 564-768 80-258 (273)
198 1yxy_A Putative N-acetylmannos 98.6 5.3E-07 1.8E-11 93.1 14.3 124 583-750 94-220 (234)
199 1qo2_A Molecule: N-((5-phospho 98.6 2.5E-07 8.5E-12 96.1 11.6 150 564-761 74-238 (241)
200 2cu0_A Inosine-5'-monophosphat 98.6 3.5E-07 1.2E-11 104.9 13.9 162 580-779 230-452 (486)
201 3vzx_A Heptaprenylglyceryl pho 98.6 2.1E-06 7.1E-11 87.1 17.7 155 583-764 24-226 (228)
202 2uva_G Fatty acid synthase bet 98.5 4.8E-07 1.6E-11 118.0 14.9 174 564-781 638-829 (2060)
203 1viz_A PCRB protein homolog; s 98.5 3.1E-07 1.1E-11 94.2 10.6 157 576-758 19-223 (240)
204 3tha_A Tryptophan synthase alp 98.5 3.4E-07 1.2E-11 94.4 10.6 183 564-750 14-232 (252)
205 3f4w_A Putative hexulose 6 pho 98.5 1.6E-06 5.5E-11 87.9 15.5 139 564-751 54-193 (211)
206 3tjx_A Dihydroorotate dehydrog 98.5 1.5E-07 5.3E-12 103.4 8.0 82 345-437 34-115 (354)
207 3ovp_A Ribulose-phosphate 3-ep 98.5 6.4E-06 2.2E-10 84.3 18.9 187 566-770 7-224 (228)
208 2yw3_A 4-hydroxy-2-oxoglutarat 98.4 3.3E-07 1.1E-11 92.6 8.3 161 564-767 13-198 (207)
209 2f6u_A GGGPS, (S)-3-O-geranylg 98.4 1.2E-06 4.3E-11 89.3 12.2 50 701-751 175-224 (234)
210 1f76_A Dihydroorotate dehydrog 98.4 3.8E-06 1.3E-10 91.6 16.7 251 346-663 43-317 (336)
211 4af0_A Inosine-5'-monophosphat 98.4 8E-06 2.7E-10 91.5 19.0 145 566-749 272-417 (556)
212 2htm_A Thiazole biosynthesis p 98.4 1.1E-05 3.8E-10 82.3 18.2 160 565-764 65-228 (268)
213 3oa3_A Aldolase; structural ge 98.3 8E-06 2.7E-10 85.1 16.0 129 582-747 131-265 (288)
214 1rpx_A Protein (ribulose-phosp 98.3 5.4E-06 1.8E-10 85.3 14.5 168 566-751 13-213 (230)
215 1tqj_A Ribulose-phosphate 3-ep 98.3 5.5E-06 1.9E-10 85.1 14.5 172 566-751 7-207 (230)
216 3w01_A Heptaprenylglyceryl pho 98.3 2.8E-06 9.6E-11 86.2 11.7 160 584-764 30-232 (235)
217 3tdn_A FLR symmetric alpha-bet 98.3 2E-06 6.8E-11 89.6 11.0 90 645-763 36-125 (247)
218 3ngj_A Deoxyribose-phosphate a 98.3 3.5E-06 1.2E-10 85.8 11.9 131 577-747 95-231 (239)
219 1h1y_A D-ribulose-5-phosphate 98.3 1.6E-05 5.5E-10 81.6 17.1 141 564-751 65-207 (228)
220 3qja_A IGPS, indole-3-glycerol 98.2 1.7E-05 6E-10 83.2 16.4 115 588-751 133-248 (272)
221 2pgw_A Muconate cycloisomerase 98.2 2.7E-05 9.2E-10 86.5 18.3 146 564-761 137-286 (384)
222 1yad_A Regulatory protein TENI 98.2 2.6E-05 8.9E-10 79.6 15.8 117 584-751 82-198 (221)
223 3inp_A D-ribulose-phosphate 3- 98.2 2.6E-05 9.1E-10 80.3 15.5 168 565-750 29-228 (246)
224 3r12_A Deoxyribose-phosphate a 98.2 3E-05 1E-09 79.7 15.8 126 582-747 116-247 (260)
225 1w8s_A FBP aldolase, fructose- 98.2 6.6E-05 2.3E-09 78.5 18.5 136 583-767 98-251 (263)
226 2fli_A Ribulose-phosphate 3-ep 98.1 7E-05 2.4E-09 76.2 18.1 169 566-751 6-204 (220)
227 3ndo_A Deoxyribose-phosphate a 98.1 3.3E-05 1.1E-09 78.3 14.9 126 582-747 85-221 (231)
228 3tsm_A IGPS, indole-3-glycerol 98.1 7E-05 2.4E-09 78.2 17.3 121 586-756 138-259 (272)
229 1tqx_A D-ribulose-5-phosphate 98.1 0.00013 4.5E-09 74.3 18.1 168 566-751 8-207 (227)
230 1ub3_A Aldolase protein; schif 98.0 8.4E-05 2.9E-09 75.2 16.0 128 577-744 71-204 (220)
231 1xi3_A Thiamine phosphate pyro 98.0 0.0001 3.5E-09 74.5 16.6 147 578-751 27-196 (215)
232 2tps_A Protein (thiamin phosph 98.0 4.4E-05 1.5E-09 78.1 13.6 105 635-766 117-223 (227)
233 2gqf_A Hypothetical protein HI 98.0 5.3E-07 1.8E-11 100.9 -1.2 41 279-319 353-399 (401)
234 2e6f_A Dihydroorotate dehydrog 98.0 4.5E-05 1.5E-09 82.2 13.7 172 463-746 10-196 (314)
235 2ovl_A Putative racemase; stru 98.0 9.5E-05 3.2E-09 81.6 16.5 148 564-761 134-287 (371)
236 1thf_D HISF protein; thermophI 98.0 2.8E-05 9.6E-10 81.0 11.6 92 643-763 29-120 (253)
237 2e5v_A L-aspartate oxidase; ar 98.0 5.6E-07 1.9E-11 103.0 -1.9 215 52-318 120-364 (472)
238 1vc4_A Indole-3-glycerol phosp 98.0 4.1E-05 1.4E-09 79.6 12.5 166 564-756 46-246 (254)
239 2hzg_A Mandelate racemase/muco 98.0 0.00017 5.8E-09 80.4 18.2 150 564-761 134-292 (401)
240 3ctl_A D-allulose-6-phosphate 98.0 0.00022 7.6E-09 72.9 17.4 167 566-751 3-202 (231)
241 2bry_A NEDD9 interacting prote 98.0 1.7E-06 5.7E-11 99.7 1.6 154 88-257 37-230 (497)
242 1mdl_A Mandelate racemase; iso 97.9 0.00012 4.1E-09 80.4 15.8 146 564-760 134-284 (359)
243 1ka9_F Imidazole glycerol phos 97.9 3.6E-05 1.2E-09 80.1 10.8 91 644-763 31-121 (252)
244 1rvk_A Isomerase/lactonizing e 97.9 0.00042 1.4E-08 76.7 20.0 143 574-760 148-296 (382)
245 2nql_A AGR_PAT_674P, isomerase 97.9 0.00013 4.3E-09 81.1 14.9 147 564-762 153-304 (388)
246 2rdx_A Mandelate racemase/muco 97.9 0.00027 9.1E-09 78.2 17.4 143 564-761 135-282 (379)
247 2uv8_G Fatty acid synthase sub 97.9 4.2E-05 1.5E-09 99.3 12.4 173 564-781 645-836 (2051)
248 3ajx_A 3-hexulose-6-phosphate 97.9 0.00026 8.8E-09 71.2 15.8 138 564-751 54-192 (207)
249 1qo2_A Molecule: N-((5-phospho 97.8 2E-05 6.8E-10 81.6 6.7 89 644-763 30-118 (241)
250 1h5y_A HISF; histidine biosynt 97.8 0.0001 3.6E-09 76.3 11.3 91 644-763 33-123 (253)
251 4e38_A Keto-hydroxyglutarate-a 97.8 7.3E-05 2.5E-09 76.1 9.5 146 564-749 34-206 (232)
252 3ozy_A Putative mandelate race 97.8 0.00054 1.9E-08 75.9 17.5 145 565-760 140-291 (389)
253 3o63_A Probable thiamine-phosp 97.8 0.00032 1.1E-08 72.2 14.5 50 701-751 175-225 (243)
254 2qgy_A Enolase from the enviro 97.7 0.00044 1.5E-08 76.8 16.6 147 564-760 136-289 (391)
255 2y88_A Phosphoribosyl isomeras 97.7 9.3E-05 3.2E-09 76.6 10.1 89 645-763 32-120 (244)
256 1jvn_A Glutamine, bifunctional 97.7 8.2E-05 2.8E-09 86.3 10.2 95 644-763 280-397 (555)
257 3ceu_A Thiamine phosphate pyro 97.7 9.9E-05 3.4E-09 74.6 9.6 165 581-770 17-198 (210)
258 2p10_A MLL9387 protein; putati 97.7 0.00052 1.8E-08 70.7 14.9 157 564-751 95-265 (286)
259 2czd_A Orotidine 5'-phosphate 97.7 0.00063 2.2E-08 68.5 15.5 132 565-751 53-191 (208)
260 1vzw_A Phosphoribosyl isomeras 97.7 9.3E-05 3.2E-09 76.6 9.4 89 645-763 33-121 (244)
261 1xg4_A Probable methylisocitra 97.7 0.00062 2.1E-08 71.9 15.4 164 563-767 78-254 (295)
262 4gj1_A 1-(5-phosphoribosyl)-5- 97.6 0.0007 2.4E-08 69.9 15.0 150 566-761 76-239 (243)
263 2qdd_A Mandelate racemase/muco 97.6 0.001 3.5E-08 73.5 17.4 144 564-762 135-283 (378)
264 3jr2_A Hexulose-6-phosphate sy 97.6 0.00023 7.7E-09 72.4 10.9 139 564-750 60-199 (218)
265 2p8b_A Mandelate racemase/muco 97.6 0.00077 2.6E-08 74.2 16.0 145 565-761 132-282 (369)
266 1vhc_A Putative KHG/KDPG aldol 97.6 0.00025 8.7E-09 72.1 11.1 163 564-750 17-190 (224)
267 3stp_A Galactonate dehydratase 97.6 0.00054 1.9E-08 76.4 14.7 152 564-759 168-324 (412)
268 1nu5_A Chloromuconate cycloiso 97.6 0.0015 5E-08 72.0 18.0 138 574-761 141-284 (370)
269 3nlc_A Uncharacterized protein 97.6 9.7E-05 3.3E-09 85.5 8.8 93 148-256 108-276 (549)
270 2gl5_A Putative dehydratase pr 97.6 0.00038 1.3E-08 77.9 13.4 137 575-748 150-302 (410)
271 1wbh_A KHG/KDPG aldolase; lyas 97.6 0.00027 9.3E-09 71.4 10.8 180 564-768 16-210 (214)
272 2gjc_A Thiazole biosynthetic e 97.6 0.00036 1.2E-08 75.1 12.2 170 149-323 67-325 (326)
273 3eez_A Putative mandelate race 97.6 0.00078 2.7E-08 74.4 15.2 144 564-762 135-283 (378)
274 3glc_A Aldolase LSRF; TIM barr 97.6 0.00099 3.4E-08 70.3 15.1 152 563-767 105-277 (295)
275 2ps2_A Putative mandelate race 97.6 0.002 6.8E-08 71.0 18.3 142 564-760 136-283 (371)
276 2oz8_A MLL7089 protein; struct 97.5 0.0037 1.3E-07 69.2 20.4 133 564-745 133-273 (389)
277 2w6r_A Imidazole glycerol phos 97.5 0.00019 6.5E-09 75.3 9.5 89 645-761 31-121 (266)
278 1vcv_A Probable deoxyribose-ph 97.5 0.0019 6.4E-08 65.4 16.2 140 579-747 70-222 (226)
279 2qq6_A Mandelate racemase/muco 97.5 0.00079 2.7E-08 75.2 14.4 133 575-746 149-292 (410)
280 3lab_A Putative KDPG (2-keto-3 97.5 0.0013 4.4E-08 65.9 14.3 135 564-760 13-154 (217)
281 1y0p_A Fumarate reductase flav 97.5 0.00036 1.2E-08 81.6 12.0 61 195-266 265-326 (571)
282 1n7k_A Deoxyribose-phosphate a 97.5 0.0011 3.8E-08 67.4 14.0 124 576-744 87-220 (234)
283 2qr6_A IMP dehydrogenase/GMP r 97.5 0.00045 1.5E-08 76.8 11.9 101 616-746 140-240 (393)
284 1mxs_A KDPG aldolase; 2-keto-3 97.5 0.00028 9.5E-09 71.9 9.2 180 564-768 26-220 (225)
285 1tkk_A Similar to chloromucona 97.5 0.0033 1.1E-07 69.0 18.6 146 565-761 131-283 (366)
286 2og9_A Mandelate racemase/muco 97.5 0.0015 5.1E-08 72.5 15.6 126 575-749 162-292 (393)
287 1i4n_A Indole-3-glycerol phosp 97.4 0.0019 6.5E-08 66.6 14.9 116 586-751 119-236 (251)
288 3oz2_A Digeranylgeranylglycero 97.4 0.00051 1.7E-08 75.5 11.4 94 150-256 7-161 (397)
289 3klj_A NAD(FAD)-dependent dehy 97.4 0.00021 7.1E-09 79.3 8.2 91 148-257 10-116 (385)
290 2a4a_A Deoxyribose-phosphate a 97.4 0.00081 2.8E-08 70.1 12.0 123 581-740 110-249 (281)
291 2o56_A Putative mandelate race 97.4 0.00099 3.4E-08 74.4 13.7 137 575-748 152-299 (407)
292 4dwd_A Mandelate racemase/muco 97.4 0.0045 1.5E-07 68.6 18.7 143 564-749 126-275 (393)
293 1q6o_A Humps, 3-keto-L-gulonat 97.4 0.0021 7.2E-08 65.1 14.8 152 565-764 58-212 (216)
294 4a9w_A Monooxygenase; baeyer-v 97.4 0.00021 7.1E-09 77.5 7.7 91 149-256 5-131 (357)
295 1qo8_A Flavocytochrome C3 fuma 97.4 0.00068 2.3E-08 79.1 12.6 61 195-266 260-321 (566)
296 3vrd_B FCCB subunit, flavocyto 97.4 0.00037 1.3E-08 77.5 9.9 90 148-256 3-107 (401)
297 4gj1_A 1-(5-phosphoribosyl)-5- 97.4 0.00034 1.2E-08 72.2 8.9 92 643-763 30-121 (243)
298 3rcy_A Mandelate racemase/muco 97.4 0.0022 7.6E-08 71.9 16.1 139 574-749 145-288 (433)
299 1p1x_A Deoxyribose-phosphate a 97.4 0.00074 2.5E-08 69.8 11.0 124 581-740 89-222 (260)
300 3cwo_X Beta/alpha-barrel prote 97.4 0.00081 2.8E-08 68.4 11.4 91 645-764 131-221 (237)
301 3h8l_A NADH oxidase; membrane 97.4 0.00039 1.3E-08 77.6 9.7 93 149-257 3-113 (409)
302 1ep3_A Dihydroorotate dehydrog 97.4 0.0011 3.7E-08 71.1 12.8 93 632-744 98-195 (311)
303 2qde_A Mandelate racemase/muco 97.4 0.0031 1.1E-07 70.1 16.8 135 564-749 135-274 (397)
304 1tzz_A Hypothetical protein L1 97.4 0.0033 1.1E-07 69.8 17.0 126 575-749 165-299 (392)
305 2ox4_A Putative mandelate race 97.4 0.0015 5.3E-08 72.7 14.2 138 575-749 146-294 (403)
306 2poz_A Putative dehydratase; o 97.3 0.00085 2.9E-08 74.5 12.0 141 574-749 136-284 (392)
307 3cu2_A Ribulose-5-phosphate 3- 97.3 0.0023 7.9E-08 65.5 14.1 166 566-751 16-223 (237)
308 3lzw_A Ferredoxin--NADP reduct 97.3 0.00037 1.3E-08 74.8 8.7 90 149-255 9-121 (332)
309 3v76_A Flavoprotein; structura 97.3 0.00041 1.4E-08 77.8 9.1 32 149-181 29-60 (417)
310 2h6r_A Triosephosphate isomera 97.3 0.0023 7.8E-08 64.9 13.5 136 584-763 76-215 (219)
311 1pii_A N-(5'phosphoribosyl)ant 97.3 0.0017 5.7E-08 72.6 13.4 123 586-759 126-249 (452)
312 4eqs_A Coenzyme A disulfide re 97.3 0.00072 2.5E-08 76.3 10.8 96 149-257 2-116 (437)
313 3itj_A Thioredoxin reductase 1 97.3 0.00037 1.3E-08 75.0 8.1 94 149-257 24-142 (338)
314 4a29_A Engineered retro-aldol 97.3 0.0058 2E-07 62.3 16.1 124 589-762 125-249 (258)
315 2pp0_A L-talarate/galactarate 97.3 0.0037 1.3E-07 69.4 16.2 137 564-749 162-305 (398)
316 3cgv_A Geranylgeranyl reductas 97.3 0.001 3.4E-08 73.4 11.4 95 149-256 6-161 (397)
317 3e1t_A Halogenase; flavoprotei 97.2 0.0011 3.6E-08 76.5 11.7 96 149-256 9-171 (512)
318 2gdq_A YITF; mandelate racemas 97.2 0.0033 1.1E-07 69.5 15.0 136 564-748 124-269 (382)
319 1d4d_A Flavocytochrome C fumar 97.2 0.0016 5.5E-08 76.1 13.0 61 195-266 265-326 (572)
320 3hyw_A Sulfide-quinone reducta 97.2 0.00051 1.7E-08 77.3 8.5 90 148-256 3-108 (430)
321 3sbf_A Mandelate racemase / mu 97.2 0.0047 1.6E-07 68.6 16.0 160 564-760 123-296 (401)
322 3sjn_A Mandelate racemase/muco 97.2 0.0046 1.6E-07 68.0 15.8 139 564-749 135-279 (374)
323 3iv3_A Tagatose 1,6-diphosphat 97.2 0.0042 1.4E-07 66.3 14.7 169 583-778 116-315 (332)
324 3rr1_A GALD, putative D-galact 97.2 0.003 1E-07 70.3 14.3 144 564-749 115-263 (405)
325 3k7m_X 6-hydroxy-L-nicotine ox 97.2 0.0009 3.1E-08 75.0 10.1 31 149-180 3-33 (431)
326 3alj_A 2-methyl-3-hydroxypyrid 97.2 0.0011 3.9E-08 72.9 10.4 88 149-256 13-159 (379)
327 2i0z_A NAD(FAD)-utilizing dehy 97.1 0.00082 2.8E-08 76.0 9.2 92 149-256 28-190 (447)
328 3atr_A Conserved archaeal prot 97.1 0.00091 3.1E-08 75.7 9.4 97 149-256 8-161 (453)
329 3zen_D Fatty acid synthase; tr 97.1 0.00064 2.2E-08 91.8 9.2 143 564-750 483-651 (3089)
330 3fg2_P Putative rubredoxin red 97.1 0.00086 2.9E-08 74.7 8.9 91 148-257 2-110 (404)
331 3r4e_A Mandelate racemase/muco 97.1 0.0029 1E-07 70.7 13.1 150 564-749 133-305 (418)
332 4e5t_A Mandelate racemase / mu 97.1 0.0058 2E-07 67.9 15.5 150 574-761 150-304 (404)
333 3f8d_A Thioredoxin reductase ( 97.1 0.0011 3.8E-08 70.6 9.3 91 149-257 17-125 (323)
334 1yxy_A Putative N-acetylmannos 97.1 0.0071 2.4E-07 61.8 15.0 128 564-742 16-157 (234)
335 2gqf_A Hypothetical protein HI 97.1 0.0012 4E-08 73.6 9.6 32 149-181 6-37 (401)
336 3sx6_A Sulfide-quinone reducta 97.1 0.00093 3.2E-08 75.3 8.9 90 148-257 5-112 (437)
337 2zad_A Muconate cycloisomerase 97.1 0.011 3.7E-07 64.4 17.1 130 564-744 129-264 (345)
338 4fk1_A Putative thioredoxin re 97.1 0.0014 4.9E-08 69.7 9.8 31 150-181 9-39 (304)
339 4at0_A 3-ketosteroid-delta4-5a 97.1 0.0019 6.6E-08 74.3 11.6 58 197-266 214-273 (510)
340 1k0i_A P-hydroxybenzoate hydro 97.1 0.0011 3.7E-08 73.4 9.1 95 149-256 4-162 (394)
341 3oc4_A Oxidoreductase, pyridin 97.1 0.0021 7.2E-08 72.7 11.6 93 149-257 4-115 (452)
342 3ntd_A FAD-dependent pyridine 97.1 0.0014 4.7E-08 76.4 10.4 95 149-257 3-117 (565)
343 3fbs_A Oxidoreductase; structu 97.1 0.0013 4.3E-08 69.3 9.2 91 149-257 4-112 (297)
344 4e4u_A Mandalate racemase/muco 97.1 0.01 3.5E-07 66.1 16.9 148 574-759 143-295 (412)
345 3i4k_A Muconate lactonizing en 97.1 0.018 6.1E-07 63.5 18.7 146 564-760 138-289 (383)
346 1q1r_A Putidaredoxin reductase 97.1 0.0012 4.1E-08 74.2 9.4 92 148-257 5-114 (431)
347 3ef6_A Toluene 1,2-dioxygenase 97.1 0.0013 4.5E-08 73.4 9.6 92 148-257 3-111 (410)
348 3bjs_A Mandelate racemase/muco 97.0 0.0042 1.5E-07 69.6 13.7 126 574-749 183-315 (428)
349 4eiv_A Deoxyribose-phosphate a 97.0 0.0046 1.6E-07 64.1 12.5 117 583-736 106-252 (297)
350 3nix_A Flavoprotein/dehydrogen 97.0 0.0021 7.1E-08 71.6 11.0 32 149-181 7-38 (421)
351 3ics_A Coenzyme A-disulfide re 97.0 0.0014 4.9E-08 76.8 9.9 96 148-257 37-152 (588)
352 2zbw_A Thioredoxin reductase; 97.0 0.0014 4.7E-08 70.6 9.0 91 149-256 7-120 (335)
353 3kd9_A Coenzyme A disulfide re 97.0 0.00082 2.8E-08 76.0 7.4 92 148-257 4-114 (449)
354 3i3l_A Alkylhalidase CMLS; fla 97.0 0.0016 5.5E-08 76.2 9.9 95 149-256 25-187 (591)
355 3ab1_A Ferredoxin--NADP reduct 97.0 0.0012 4.1E-08 72.0 8.4 92 149-256 16-130 (360)
356 3khj_A Inosine-5-monophosphate 97.0 0.0068 2.3E-07 66.1 14.2 128 564-745 46-173 (361)
357 3d1c_A Flavin-containing putat 97.0 0.0012 4.2E-08 72.0 8.3 91 149-256 6-142 (369)
358 2vou_A 2,6-dihydroxypyridine h 97.0 0.0023 7.9E-08 70.9 10.7 34 148-182 6-39 (397)
359 3lxd_A FAD-dependent pyridine 97.0 0.0014 4.6E-08 73.4 8.8 91 149-257 11-119 (415)
360 3tji_A Mandelate racemase/muco 97.0 0.0076 2.6E-07 67.4 14.7 160 564-760 144-317 (422)
361 3iwa_A FAD-dependent pyridine 96.9 0.0014 4.7E-08 74.6 8.6 96 148-257 4-125 (472)
362 1gte_A Dihydropyrimidine dehyd 96.9 0.021 7.1E-07 71.3 19.7 186 462-744 538-734 (1025)
363 1xhc_A NADH oxidase /nitrite r 96.9 0.0013 4.4E-08 72.4 7.9 89 148-257 9-113 (367)
364 2hxt_A L-fuconate dehydratase; 96.9 0.0083 2.8E-07 67.6 14.6 126 573-747 196-326 (441)
365 3h28_A Sulfide-quinone reducta 96.9 0.0014 4.6E-08 73.7 8.0 90 148-257 3-109 (430)
366 3dme_A Conserved exported prot 96.9 0.002 6.9E-08 70.0 9.1 32 149-181 6-37 (369)
367 1y56_B Sarcosine oxidase; dehy 96.9 0.0028 9.7E-08 69.5 10.2 32 149-181 7-38 (382)
368 3ro6_B Putative chloromuconate 96.9 0.011 3.7E-07 64.6 14.6 145 564-760 130-280 (356)
369 1y0e_A Putative N-acetylmannos 96.9 0.021 7.1E-07 57.8 15.8 130 565-746 6-147 (223)
370 4fo4_A Inosine 5'-monophosphat 96.8 0.0095 3.2E-07 65.0 13.8 131 564-745 47-177 (366)
371 1to3_A Putative aldolase YIHT; 96.8 0.01 3.5E-07 63.1 13.8 128 582-751 113-260 (304)
372 3jsk_A Cypbp37 protein; octame 96.8 0.0055 1.9E-07 66.3 11.8 172 149-324 81-336 (344)
373 3s5w_A L-ornithine 5-monooxyge 96.8 0.0034 1.1E-07 71.1 10.7 97 149-257 32-192 (463)
374 2xve_A Flavin-containing monoo 96.8 0.0035 1.2E-07 71.2 10.7 98 149-256 4-167 (464)
375 3kts_A Glycerol uptake operon 96.8 0.00086 3E-08 65.8 4.8 49 704-753 139-187 (192)
376 2q7v_A Thioredoxin reductase; 96.8 0.0031 1.1E-07 67.6 9.8 92 149-257 10-123 (325)
377 1yvv_A Amine oxidase, flavin-c 96.8 0.004 1.4E-07 66.9 10.6 32 149-181 4-35 (336)
378 3v3w_A Starvation sensing prot 96.8 0.011 3.8E-07 66.1 14.4 148 564-749 139-311 (424)
379 1chr_A Chloromuconate cycloiso 96.8 0.029 9.9E-07 61.5 17.5 147 564-760 132-283 (370)
380 1ryi_A Glycine oxidase; flavop 96.8 0.0023 7.9E-08 70.2 8.7 32 149-181 19-50 (382)
381 4g6h_A Rotenone-insensitive NA 96.8 0.0024 8.3E-08 73.2 9.2 107 148-257 43-169 (502)
382 2cdu_A NADPH oxidase; flavoenz 96.8 0.0022 7.7E-08 72.4 8.5 95 149-257 2-117 (452)
383 2q0l_A TRXR, thioredoxin reduc 96.8 0.0027 9.2E-08 67.5 8.7 92 149-257 3-114 (311)
384 2zxi_A TRNA uridine 5-carboxym 96.8 0.0042 1.4E-07 72.5 10.8 31 149-180 29-59 (637)
385 2gqw_A Ferredoxin reductase; f 96.8 0.0028 9.5E-08 70.7 9.0 92 148-257 8-113 (408)
386 4gcm_A TRXR, thioredoxin reduc 96.7 0.0033 1.1E-07 67.0 9.2 89 150-257 9-116 (312)
387 3ces_A MNMG, tRNA uridine 5-ca 96.7 0.0037 1.3E-07 73.2 10.2 30 150-180 31-60 (651)
388 2x3n_A Probable FAD-dependent 96.7 0.0036 1.2E-07 69.3 9.8 32 149-181 8-39 (399)
389 3ddm_A Putative mandelate race 96.7 0.01 3.6E-07 65.6 13.3 133 564-749 147-285 (392)
390 1nhp_A NADH peroxidase; oxidor 96.7 0.0028 9.6E-08 71.5 9.0 95 149-257 2-115 (447)
391 3mqt_A Mandelate racemase/muco 96.7 0.019 6.5E-07 63.6 15.3 135 578-760 155-296 (394)
392 3cty_A Thioredoxin reductase; 96.7 0.0056 1.9E-07 65.4 10.5 90 149-257 18-126 (319)
393 3go2_A Putative L-alanine-DL-g 96.7 0.013 4.3E-07 65.3 13.6 137 574-747 142-294 (409)
394 3exr_A RMPD (hexulose-6-phosph 96.7 0.012 4.2E-07 59.5 12.3 155 564-765 59-218 (221)
395 3jva_A Dipeptide epimerase; en 96.7 0.028 9.5E-07 61.3 16.1 137 574-761 138-279 (354)
396 3q58_A N-acetylmannosamine-6-p 96.7 0.031 1E-06 56.9 15.2 125 564-744 18-155 (229)
397 2agk_A 1-(5-phosphoribosyl)-5- 96.6 0.0023 7.9E-08 66.6 6.8 85 644-764 38-126 (260)
398 2gag_B Heterotetrameric sarcos 96.6 0.0036 1.2E-07 69.1 9.0 32 149-181 23-56 (405)
399 1vdc_A NTR, NADPH dependent th 96.6 0.002 7E-08 69.2 6.6 90 149-257 10-124 (333)
400 3da1_A Glycerol-3-phosphate de 96.6 0.0073 2.5E-07 70.3 11.7 52 195-256 180-231 (561)
401 3igs_A N-acetylmannosamine-6-p 96.6 0.033 1.1E-06 56.8 15.1 125 564-744 18-155 (232)
402 3ih1_A Methylisocitrate lyase; 96.6 0.053 1.8E-06 57.2 17.0 163 564-767 90-262 (305)
403 3vcn_A Mannonate dehydratase; 96.6 0.014 4.8E-07 65.3 13.3 150 564-749 140-312 (425)
404 1fl2_A Alkyl hydroperoxide red 96.6 0.0044 1.5E-07 65.8 8.8 93 149-257 3-115 (310)
405 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0073 2.5E-07 68.1 11.1 34 148-181 7-41 (447)
406 3lab_A Putative KDPG (2-keto-3 96.6 0.013 4.6E-07 58.5 11.5 76 634-743 14-90 (217)
407 2bc0_A NADH oxidase; flavoprot 96.6 0.0034 1.2E-07 71.8 8.1 94 148-257 36-149 (490)
408 3gd6_A Muconate cycloisomerase 96.5 0.046 1.6E-06 60.4 16.8 144 564-760 128-282 (391)
409 3ugv_A Enolase; enzyme functio 96.5 0.043 1.5E-06 60.6 16.5 137 564-749 158-304 (390)
410 3fmw_A Oxygenase; mithramycin, 96.5 0.0097 3.3E-07 69.3 11.9 105 149-271 51-217 (570)
411 3mkc_A Racemase; metabolic pro 96.5 0.023 7.9E-07 62.9 14.2 134 578-759 160-300 (394)
412 1sjd_A N-acylamino acid racema 96.5 0.025 8.5E-07 62.0 14.4 123 574-749 140-267 (368)
413 3toy_A Mandelate racemase/muco 96.5 0.057 2E-06 59.4 17.2 136 564-749 157-298 (383)
414 3my9_A Muconate cycloisomerase 96.5 0.066 2.3E-06 58.8 17.6 145 564-759 136-285 (377)
415 3ihg_A RDME; flavoenzyme, anth 96.5 0.012 4E-07 68.0 12.2 32 149-181 7-38 (535)
416 2gmh_A Electron transfer flavo 96.5 0.01 3.5E-07 69.4 11.6 107 149-256 37-216 (584)
417 3dg3_A Muconate cycloisomerase 96.5 0.064 2.2E-06 58.7 17.3 144 564-759 129-278 (367)
418 3r9u_A Thioredoxin reductase; 96.5 0.0062 2.1E-07 64.5 8.9 90 149-257 6-118 (315)
419 3t6c_A RSPA, putative MAND fam 96.5 0.076 2.6E-06 59.5 18.1 160 564-760 145-335 (440)
420 2vdc_G Glutamate synthase [NAD 96.4 0.0011 3.9E-08 75.0 3.2 83 148-256 123-218 (456)
421 1trb_A Thioredoxin reductase; 96.4 0.0043 1.5E-07 66.1 7.5 90 149-257 7-116 (320)
422 1hyu_A AHPF, alkyl hydroperoxi 96.4 0.0045 1.5E-07 71.4 7.9 93 149-257 214-326 (521)
423 3ve9_A Orotidine-5'-phosphate 96.4 0.027 9.3E-07 56.6 12.5 146 564-768 51-205 (215)
424 3tj4_A Mandelate racemase; eno 96.4 0.047 1.6E-06 59.9 15.5 127 574-749 150-282 (372)
425 3cp8_A TRNA uridine 5-carboxym 96.4 0.0085 2.9E-07 70.1 9.9 30 150-180 24-53 (641)
426 1ypf_A GMP reductase; GUAC, pu 96.4 0.047 1.6E-06 59.0 15.2 129 564-745 47-177 (336)
427 2qa2_A CABE, polyketide oxygen 96.4 0.016 5.4E-07 66.4 12.2 94 149-256 14-165 (499)
428 3nl6_A Thiamine biosynthetic b 96.4 0.034 1.2E-06 63.8 14.7 66 701-769 153-231 (540)
429 4a5l_A Thioredoxin reductase; 96.4 0.0063 2.2E-07 64.6 8.2 31 150-181 7-37 (314)
430 2uzz_A N-methyl-L-tryptophan o 96.3 0.0071 2.4E-07 66.0 8.5 32 149-181 4-35 (372)
431 3uox_A Otemo; baeyer-villiger 96.3 0.0084 2.9E-07 69.5 9.5 32 149-181 11-42 (545)
432 3m47_A Orotidine 5'-phosphate 96.3 0.053 1.8E-06 55.1 14.3 135 564-751 65-208 (228)
433 2qa1_A PGAE, polyketide oxygen 96.3 0.016 5.5E-07 66.3 11.7 94 149-256 13-164 (500)
434 3cgb_A Pyridine nucleotide-dis 96.3 0.007 2.4E-07 69.0 8.6 95 149-257 38-152 (480)
435 4ap3_A Steroid monooxygenase; 96.3 0.0097 3.3E-07 69.0 9.8 90 149-254 23-156 (549)
436 2xdo_A TETX2 protein; tetracyc 96.3 0.0097 3.3E-07 65.8 9.4 32 149-181 28-59 (398)
437 1w0m_A TIM, triosephosphate is 96.3 0.16 5.4E-06 51.3 17.3 137 585-765 80-220 (226)
438 3q45_A Mandelate racemase/muco 96.2 0.073 2.5E-06 58.2 16.2 136 574-760 139-279 (368)
439 2qcu_A Aerobic glycerol-3-phos 96.2 0.011 3.9E-07 67.6 10.0 32 149-181 5-36 (501)
440 3qj4_A Renalase; FAD/NAD(P)-bi 96.2 0.0077 2.6E-07 65.1 8.2 31 149-180 3-36 (342)
441 3gwf_A Cyclohexanone monooxyge 96.2 0.007 2.4E-07 70.0 8.1 91 149-255 10-145 (540)
442 3ih1_A Methylisocitrate lyase; 96.2 0.079 2.7E-06 56.0 15.3 151 582-763 41-210 (305)
443 3r0u_A Enzyme of enolase super 96.2 0.16 5.5E-06 55.7 18.4 144 564-759 132-282 (379)
444 3i6e_A Muconate cycloisomerase 96.2 0.21 7.1E-06 55.0 19.3 145 564-759 138-286 (385)
445 1eix_A Orotidine 5'-monophosph 96.2 0.04 1.4E-06 56.7 12.7 133 565-751 67-227 (245)
446 1kf6_A Fumarate reductase flav 96.1 0.013 4.5E-07 68.6 10.1 31 150-181 8-40 (602)
447 1s2w_A Phosphoenolpyruvate pho 96.1 0.15 5.2E-06 53.6 17.2 154 563-751 79-244 (295)
448 3c96_A Flavin-containing monoo 96.1 0.017 5.9E-07 64.1 10.6 33 149-181 6-38 (410)
449 4hb9_A Similarities with proba 96.1 0.011 3.7E-07 65.2 8.8 32 149-181 3-34 (412)
450 3eoo_A Methylisocitrate lyase; 96.1 0.19 6.5E-06 52.8 17.7 156 583-763 35-206 (298)
451 1zco_A 2-dehydro-3-deoxyphosph 96.1 0.19 6.6E-06 52.0 17.6 176 565-765 25-257 (262)
452 2hjp_A Phosphonopyruvate hydro 96.1 0.14 4.6E-06 53.9 16.5 167 563-767 75-254 (290)
453 3tcs_A Racemase, putative; PSI 96.1 0.15 5E-06 56.2 17.4 143 575-760 146-294 (388)
454 2gf3_A MSOX, monomeric sarcosi 96.0 0.013 4.4E-07 64.3 8.9 32 149-181 5-36 (389)
455 4e38_A Keto-hydroxyglutarate-a 96.0 0.033 1.1E-06 56.5 11.0 89 620-744 24-112 (232)
456 1vc4_A Indole-3-glycerol phosp 96.0 0.058 2E-06 55.7 13.2 96 632-761 45-148 (254)
457 4e4f_A Mannonate dehydratase; 96.0 0.029 9.9E-07 62.7 11.7 150 564-749 139-313 (426)
458 1mo9_A ORF3; nucleotide bindin 96.0 0.023 7.8E-07 65.4 11.1 32 149-181 45-76 (523)
459 1vr6_A Phospho-2-dehydro-3-deo 96.0 0.37 1.3E-05 51.8 19.6 176 565-770 108-345 (350)
460 3mwc_A Mandelate racemase/muco 96.0 0.11 3.7E-06 57.6 16.1 143 564-760 150-299 (400)
461 3ru6_A Orotidine 5'-phosphate 96.0 0.18 6.1E-06 53.1 16.7 134 564-751 77-236 (303)
462 2a87_A TRXR, TR, thioredoxin r 96.0 0.0052 1.8E-07 66.2 5.2 90 149-257 16-126 (335)
463 3eoo_A Methylisocitrate lyase; 96.0 0.19 6.6E-06 52.8 16.9 164 563-767 83-258 (298)
464 2rgh_A Alpha-glycerophosphate 96.0 0.029 9.8E-07 65.4 11.8 32 149-181 34-65 (571)
465 3dgb_A Muconate cycloisomerase 96.0 0.2 6.7E-06 55.1 18.0 146 564-759 138-288 (382)
466 1hg3_A Triosephosphate isomera 96.0 0.28 9.7E-06 49.4 17.6 135 585-763 83-221 (225)
467 3rp8_A Flavoprotein monooxygen 96.0 0.014 4.8E-07 64.7 8.8 32 149-181 25-56 (407)
468 1dbt_A Orotidine 5'-phosphate 96.0 0.18 6.1E-06 51.6 16.4 133 565-751 56-220 (239)
469 3fv9_G Mandelate racemase/muco 96.0 0.19 6.5E-06 55.3 17.8 146 564-759 135-286 (386)
470 2ze3_A DFA0005; organic waste 96.0 0.21 7E-06 52.1 16.9 143 564-750 77-237 (275)
471 3l8k_A Dihydrolipoyl dehydroge 95.9 0.009 3.1E-07 67.8 7.2 32 149-181 6-37 (466)
472 1zk7_A HGII, reductase, mercur 95.9 0.016 5.5E-07 65.6 9.3 31 149-180 6-36 (467)
473 1m6i_A Programmed cell death p 95.9 0.0059 2E-07 69.9 5.6 32 149-181 13-46 (493)
474 3ps9_A TRNA 5-methylaminomethy 95.9 0.014 4.6E-07 69.6 8.8 31 149-180 274-304 (676)
475 1r0m_A N-acylamino acid racema 95.9 0.063 2.2E-06 58.9 13.6 123 574-749 147-273 (375)
476 3tsm_A IGPS, indole-3-glycerol 95.9 0.046 1.6E-06 56.9 11.6 87 632-749 58-153 (272)
477 2zc8_A N-acylamino acid racema 95.9 0.072 2.4E-06 58.3 13.9 123 574-749 140-266 (369)
478 3fcp_A L-Ala-D/L-Glu epimerase 95.9 0.29 1E-05 53.7 18.8 147 564-761 137-289 (381)
479 2v3a_A Rubredoxin reductase; a 95.8 0.016 5.3E-07 63.9 8.5 90 149-257 6-113 (384)
480 3urh_A Dihydrolipoyl dehydroge 95.8 0.032 1.1E-06 63.6 11.3 32 149-181 27-58 (491)
481 1pj5_A N,N-dimethylglycine oxi 95.8 0.016 5.5E-07 70.7 9.2 33 149-181 6-38 (830)
482 3tfx_A Orotidine 5'-phosphate 95.8 0.21 7.1E-06 51.5 16.0 148 564-765 57-238 (259)
483 2yyu_A Orotidine 5'-phosphate 95.8 0.1 3.6E-06 53.6 13.8 133 565-751 57-221 (246)
484 3g8r_A Probable spore coat pol 95.7 0.29 9.8E-06 52.5 17.3 154 564-772 92-261 (350)
485 3dje_A Fructosyl amine: oxygen 95.7 0.032 1.1E-06 62.4 10.5 33 149-181 8-40 (438)
486 2qae_A Lipoamide, dihydrolipoy 95.7 0.019 6.6E-07 65.0 8.5 32 149-181 4-35 (468)
487 3c4n_A Uncharacterized protein 95.7 0.009 3.1E-07 66.4 5.6 30 150-180 39-70 (405)
488 2e5v_A L-aspartate oxidase; ar 95.7 0.028 9.6E-07 63.8 9.8 30 150-180 2-31 (472)
489 3pl8_A Pyranose 2-oxidase; sub 95.7 0.034 1.2E-06 65.4 10.8 57 199-266 274-332 (623)
490 3o1n_A 3-dehydroquinate dehydr 95.6 0.42 1.4E-05 49.8 17.8 87 566-663 42-139 (276)
491 4dbe_A Orotidine 5'-phosphate 95.6 0.18 6.2E-06 50.9 14.5 153 564-769 53-213 (222)
492 1w4x_A Phenylacetone monooxyge 95.6 0.026 8.8E-07 65.3 9.5 32 149-181 18-49 (542)
493 1chu_A Protein (L-aspartate ox 95.6 0.035 1.2E-06 64.2 10.5 31 149-181 10-40 (540)
494 3nyc_A D-arginine dehydrogenas 95.6 0.024 8.3E-07 61.7 8.8 32 148-181 10-41 (381)
495 1y56_A Hypothetical protein PH 95.6 0.0089 3E-07 68.4 5.2 94 149-257 110-219 (493)
496 1xg4_A Probable methylisocitra 95.6 0.37 1.3E-05 50.7 17.1 157 583-764 30-203 (295)
497 2wdq_A Succinate dehydrogenase 95.6 0.047 1.6E-06 63.7 11.4 31 150-181 10-40 (588)
498 3b4u_A Dihydrodipicolinate syn 95.5 0.14 4.7E-06 54.2 14.0 84 574-666 21-107 (294)
499 1dxl_A Dihydrolipoamide dehydr 95.5 0.027 9.1E-07 63.8 8.9 32 149-181 8-39 (470)
500 2gag_A Heterotetrameric sarcos 95.5 0.03 1E-06 69.3 10.0 102 149-257 130-253 (965)
No 1
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=3.9e-86 Score=826.30 Aligned_cols=683 Identities=64% Similarity=1.062 Sum_probs=601.2
Q ss_pred ec-ceeEeecC-CCCccccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeeccccceeccccccCCCEEEEccCCCCCC
Q psy16199 25 SK-DLPDIERP-VAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNAN 102 (842)
Q Consensus 25 g~-~V~l~Ek~-~~GG~~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~~~v~~~~~~~~~yd~lVlAtGs~~~~ 102 (842)
|| +|+|||+. .+||++.+++|.++++.+++++..+++++.||+|++++.++.++++++++....||+||||||+..|+
T Consensus 210 G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 210 GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBSTTSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEeccceEEhhhcCccCCCEEEEecCCCCCC
Confidence 88 79999997 89999999999999999999999999999999999999887446777766667899999999995477
Q ss_pred CCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 103 VIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 103 ~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
.+++++|+.+.++++++.+||+.+++..+..+| .|+. .....+++|+|||||++|+|+|..+.+.|+++||+++|++.
T Consensus 290 ~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~-~~~~-~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 290 TDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMC-ACHS-PLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp CCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTB-SCCC-CCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred CCCCCCCCCCCCCEEEhHHHHHHHHhhcccccc-cccc-cccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 777655665567899999999887765444455 4443 12334567999999999999999999999877999999986
Q ss_pred ccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH
Q psy16199 183 TNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV 262 (842)
Q Consensus 183 ~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l 262 (842)
..++..+++++.+.++||++++++.++++..+++++++|++.+.+.+++|+++..+|++.++++|.||+|+|++|++..|
T Consensus 368 ~~~~~~~~e~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l 447 (1025)
T 1gte_A 368 VNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKV 447 (1025)
T ss_dssp GGCCSCHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHH
T ss_pred hhCCCCHHHHHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhh
Confidence 67888888888889999999999999999755788988988876667788877667777789999999999998677888
Q ss_pred HhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCceeec
Q psy16199 263 LEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSH 342 (842)
Q Consensus 263 ~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~~L~~~~~~~~~~~~~~p~~~t~ 342 (842)
...+.|++++++|+|.||+++++|+.|+|||+||++.++.+++.|+.||+.||.+|+++|+...+..+...+..|++|++
T Consensus 448 ~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~e 527 (1025)
T 1gte_A 448 KEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTP 527 (1025)
T ss_dssp HHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCG
T ss_pred hhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccc
Confidence 87755899999999999966899999999999999988889999999999999999999986545555556788999999
Q ss_pred cccccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcce
Q psy16199 343 IDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSF 422 (842)
Q Consensus 343 i~~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 422 (842)
+++++++++++|++|.||+++|++++..+.+.+.++...|+|++++||++.++..++|++||+.+.+.+++.+||...+|
T Consensus 528 v~~v~ls~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~ 607 (1025)
T 1gte_A 528 VDLVDISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSF 607 (1025)
T ss_dssp GGGCCCCEEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCE
T ss_pred cccccceeeeccccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhhe
Confidence 99999999999999999999999999999999999999999999999999887766899999998766778899988899
Q ss_pred eeeEeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhccccccCCcccccCCCCCCCCCChhHHHHhhhhhhCcccccc
Q psy16199 423 LNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502 (842)
Q Consensus 423 ~n~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~~G~~~g~v 502 (842)
+|.|.+++..++.|. .. +..++ .
T Consensus 608 ~n~e~~~~~~~~~~~---~~--------------i~~~~-----------------~----------------------- 630 (1025)
T 1gte_A 608 LNIELISEKTAAYWC---QS--------------VTELK-----------------A----------------------- 630 (1025)
T ss_dssp EECCCSCSSCHHHHH---HH--------------HHHHH-----------------H-----------------------
T ss_pred eeeccccchhHHHHH---HH--------------HHHHH-----------------h-----------------------
Confidence 999999999999887 43 33333 1
Q ss_pred ccCccCCCcceeEeeccCCccccCCccccCCCccchhhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHH
Q psy16199 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLEL 582 (842)
Q Consensus 503 t~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~G~dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~ 582 (842)
. .++ .|+|+|++++.++++|.++
T Consensus 631 -----------------~-----------------------~~~-----------------~~~i~~i~~g~~~~~~~~~ 653 (1025)
T 1gte_A 631 -----------------D-----------------------FPD-----------------NIVIASIMCSYNKNDWMEL 653 (1025)
T ss_dssp -----------------H-----------------------CTT-----------------SEEEEEECCCSCHHHHHHH
T ss_pred -----------------c-----------------------CCC-----------------CCeEEEecCCCCHHHHHHH
Confidence 0 111 6899999888899999999
Q ss_pred HHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEE
Q psy16199 583 SKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVS 662 (842)
Q Consensus 583 a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~ 662 (842)
+++++++|+|+||||++||+.+..+++|++++++++.+.++++++++.+++||+||++++++++.++|+.++++|+|+|+
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~ 733 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVT 733 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEE
Q psy16199 663 AINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742 (842)
Q Consensus 663 v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~V 742 (842)
++||+.+.+.++++.+++|.++.|+++..||+||++++|+++++++++++.++++|||++|||.|++|+.++|++||++|
T Consensus 734 v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v 813 (1025)
T 1gte_A 734 ATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVL 813 (1025)
T ss_dssp ECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred EeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEE
Confidence 99999999989988778888876778889999999999999999999999987799999999999999999999999999
Q ss_pred EEehhhhccCchhHHHHHHHHHHHHHhcCC-CccccCCCCCCCccccCCCCCCcchhhccCCCCCchhhHHHHHHHHHHH
Q psy16199 743 QICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITEL 821 (842)
Q Consensus 743 qv~ta~l~~gp~~~~~i~~~l~~~m~~~g~-~i~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 821 (842)
||+|++++++|.++.++.++|+.+|.+.|+ +++++.++..+...|.++++..++.+++|..++++.+|...|+..++.+
T Consensus 814 ~vg~~~l~~~~~~~~~~~~~l~~~l~~~G~~~i~~l~g~~~~~~~h~~~~pv~s~~~~~g~~~p~~~~~~~~r~~~~~~~ 893 (1025)
T 1gte_A 814 QVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGKKLPNFGPYLEQRKKIIAEE 893 (1025)
T ss_dssp EESHHHHTSCTTHHHHHHHHHHHHHHHTTCGGGTTSBTTBCCCCCEETTEECCCCTTTTTSCCCSSHHHHHHHHHHHHHH
T ss_pred EEeeccccCCccHHHHHHHHHHHHHHHcCCCCHHHHhCCCcccccccccCcccchhhccCcccchhHHHHHHHHHHHHHH
Confidence 999999988899999999999999999999 9999999988889999999999999999999999999999887776654
Q ss_pred Hh
Q psy16199 822 NL 823 (842)
Q Consensus 822 ~~ 823 (842)
..
T Consensus 894 ~~ 895 (1025)
T 1gte_A 894 KM 895 (1025)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 2
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=100.00 E-value=1.1e-49 Score=438.68 Aligned_cols=288 Identities=25% Similarity=0.281 Sum_probs=242.1
Q ss_pred ccccCCcccccCCCCCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccchh
Q psy16199 463 KKLNSDGVSLQNGLPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGYQ 539 (842)
Q Consensus 463 ~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~d 539 (842)
+..|.||||+||||||+ ++.+..|.++ +|| |+||||+.||+|||+ |+||+++++++||| |||||.|++
T Consensus 90 Gl~f~NPvglAAG~dk~-----~~~~~~l~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~----~GfnN~G~d 160 (415)
T 3i65_A 90 HLDFINPFGVAAGFDKN-----GVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINS----CGFNNMGCD 160 (415)
T ss_dssp TEEESSSEEECTTSSTT-----CSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEEC----CCSCBCCHH
T ss_pred CEECCCCCEECCCCCCC-----HHHHHHHHHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeec----CCCCchhHH
Confidence 56699999999999999 7888999887 444 999999999999999 99999999999999 999999999
Q ss_pred hhhcCccccccccccccccccccccceEEEeccCCC-----HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCC
Q psy16199 540 AITFHPETHQAHVTDECTGCTLCLSILIASIMCTYN-----KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACG 614 (842)
Q Consensus 540 ai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~-----~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~ 614 (842)
+...+......... .+......|+++||. ++. .+||.++++++.+ .+|+||||+||||+. |..++
T Consensus 161 ~~~~~l~~~~~~~~---~~~~~~~~~vgvnIg-~nk~t~~~~~Dy~~~a~~l~~-~ad~ieiNiScPNt~-----Gl~~l 230 (415)
T 3i65_A 161 KVTENLILFRKRQE---EDKLLSKHIVGVSIG-KNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP-----GLRDN 230 (415)
T ss_dssp HHHHHHHHHHHHHT---TCGGGTTCEEEEEEC-CCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCCC------------
T ss_pred HHHHHHHHHHhhcc---ccccccCceEEEEec-cccCccccHHHHHHHHHHHHh-hCCEEEEECCCCCCC-----Ccccc
Confidence 99886542110000 000011257899994 443 6899999999987 499999999999986 34567
Q ss_pred CCHHHHHHHHHHHHhh--------------------CCcc-EEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccc
Q psy16199 615 QDPEMVRNISLWVRSS--------------------VKIP-FFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLM 671 (842)
Q Consensus 615 ~~~~~~~~ii~~v~~~--------------------~~~P-v~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~ 671 (842)
|+++.+.+++++|++. .++| |+||++|+++ ++.++|++++++|+|+|+++||+...
T Consensus 231 q~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r- 309 (415)
T 3i65_A 231 QEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQI- 309 (415)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCC-
T ss_pred cCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccc-
Confidence 9999999999999986 3689 9999999987 68999999999999999999998753
Q ss_pred cCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 672 SLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 672 ~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
++++. .....||+||++++|.++++|+++++.++ ++|||++|||.|++||.+++++|||+|||||++++
T Consensus 310 -~dl~~---------~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~ 379 (415)
T 3i65_A 310 -NDIKS---------FENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 379 (415)
T ss_dssp -CCCGG---------GTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHH
T ss_pred -ccccc---------cccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 33331 12458999999999999999999999985 59999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 751 QDFTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 751 ~gp~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
+||+++.+|+++|++||++.|+ +++|++|.
T Consensus 380 ~GP~~~~~i~~~L~~~l~~~G~~si~e~~G~ 410 (415)
T 3i65_A 380 NGMKSAVQIKRELNHLLYQRGYYNLKEAIGR 410 (415)
T ss_dssp HGGGHHHHHHHHHHHHHHHTTCSSSTTTTTT
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 9999999999999999999999 99999886
No 3
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=100.00 E-value=8.2e-49 Score=427.51 Aligned_cols=289 Identities=20% Similarity=0.269 Sum_probs=250.8
Q ss_pred ccccCCcccccCCCC-CCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccch
Q psy16199 463 KKLNSDGVSLQNGLP-KRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGY 538 (842)
Q Consensus 463 ~~~~~~~~g~~~g~d-k~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~ 538 (842)
+..|.|||++|+|+| |+ .+.++.+.++ +|| +++|||+.||+|||+ |+||++ ..+||+ |||||.|+
T Consensus 43 Gl~~~NPv~lAAG~~~~~-----~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~--~~~iN~----~G~~n~G~ 111 (354)
T 4ef8_A 43 NNTFANPFMNAAGVMCTT-----TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALP--LGSINS----MGLPNNGF 111 (354)
T ss_dssp TEEESSSEEECTTSSCSS-----HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEET--TEEEEC----CCCCBCCH
T ss_pred CEECCCCCEeccCCCCCC-----HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecc--hhhhcc----CCCCCcCH
Confidence 566999999999999 78 8999999887 566 999999999999999 899998 789999 99999999
Q ss_pred hhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHHHHh---hcCcCEEEEeccCCCCCCCCCCcccCCC
Q psy16199 539 QAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTE---KAGADALELNLSCPHGMGERGMGLACGQ 615 (842)
Q Consensus 539 dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~~~~---~agaD~ielN~scP~~~~~~~~G~~~~~ 615 (842)
+....+...... ..+.|+|+||+ |.++++|.+++++++ ++|+|+||||+||||+.+ |..+++
T Consensus 112 ~~~~~~l~~~~~----------~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~g----g~~l~~ 176 (354)
T 4ef8_A 112 DFYLAYAAEQHD----------YGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPG----KPQVAY 176 (354)
T ss_dssp HHHHHHHHHTCC----------TTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTT----SCCGGG
T ss_pred HHHHHHHHHHhh----------cCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCC----chhhcc
Confidence 998775532110 11379999996 689999999999998 568999999999999853 567789
Q ss_pred CHHHHHHHHHHHHhhCCccEEEEecCChh--cHHHHHHHHHHCC-CCEEEEecCCCccccCCCCCCCCCcccCCCccccC
Q psy16199 616 DPEMVRNISLWVRSSVKIPFFVKLTPNIT--NITDIAKAAYEGK-ADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG 692 (842)
Q Consensus 616 ~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~--~~~~~a~~~~~~G-~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~g 692 (842)
+++.+.+++++|++.+++||+||++|+++ ++.++++.+.++| +|+|+++||+...+.+|++. +.|.+ ......|
T Consensus 177 ~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~-~~~~~--~~~~~~g 253 (354)
T 4ef8_A 177 DFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAET-ESVVI--KPKQGFG 253 (354)
T ss_dssp SHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTT-TEESC--SGGGGEE
T ss_pred CHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccC-Ccccc--ccccccC
Confidence 99999999999999999999999999875 3556677777998 99999999986545555542 22222 1245689
Q ss_pred CCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcCC
Q psy16199 693 GVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST 772 (842)
Q Consensus 693 G~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~ 772 (842)
||||++++|.++++++++++..+++|||++|||.|++|+.+++++||++||+||+++++||+++.+|+++|+.||++.|+
T Consensus 254 GlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l~~~m~~~G~ 333 (354)
T 4ef8_A 254 GLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRY 333 (354)
T ss_dssp EEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999976799999999999999999999999999999999999999999999999999999999
Q ss_pred -CccccCCC
Q psy16199 773 -QLKGWDGQ 780 (842)
Q Consensus 773 -~i~~~~~~ 780 (842)
+++|++|.
T Consensus 334 ~si~el~G~ 342 (354)
T 4ef8_A 334 QTLDEFRGK 342 (354)
T ss_dssp CSGGGTTTC
T ss_pred CCHHHHHHH
Confidence 99999986
No 4
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=100.00 E-value=8.3e-48 Score=423.16 Aligned_cols=290 Identities=24% Similarity=0.263 Sum_probs=245.7
Q ss_pred ccccCCcccccCCCCCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccchh
Q psy16199 463 KKLNSDGVSLQNGLPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGYQ 539 (842)
Q Consensus 463 ~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~d 539 (842)
+..|.||||+|+||||+ ++.+..+.++ +|| ++||||+.||+|||+ |+||+++++++||+ |||||.|++
T Consensus 56 Gl~~~NPvglAaG~~~~-----~~~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~----~G~~N~G~~ 126 (367)
T 3zwt_A 56 GHKFRNPVGIAAGFDKH-----GEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINR----YGFNSHGLS 126 (367)
T ss_dssp TEEESSSEEECTTSSTT-----SSSHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEEC----CCCCBCCHH
T ss_pred CEEcCCCCEeCCCcCCC-----HHHHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeec----cCCCCccHH
Confidence 56799999999999999 8889999988 444 999999999999999 99999999999999 999999999
Q ss_pred hhhcCccccccccccccccccccccceEEEeccC----CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCC
Q psy16199 540 AITFHPETHQAHVTDECTGCTLCLSILIASIMCT----YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQ 615 (842)
Q Consensus 540 ai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g----~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~ 615 (842)
+...+........ ...+....|+++||... .+++||.++++++.+ ++|+||||+||||+. | ..+.+
T Consensus 127 ~~~~~l~~~~~~~----~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~---G--~~~l~ 196 (367)
T 3zwt_A 127 VVEHRLRARQQKQ----AKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTA---G--LRSLQ 196 (367)
T ss_dssp HHHHHHHTTHHHH----HHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST---T--GGGGG
T ss_pred HHHHHHHHHhhhc----cccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCC---C--ccccC
Confidence 9877554210000 00000126999999531 257899999999876 799999999999985 2 33569
Q ss_pred CHHHHHHHHHHHHhh-------CCccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCC
Q psy16199 616 DPEMVRNISLWVRSS-------VKIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTK 686 (842)
Q Consensus 616 ~~~~~~~ii~~v~~~-------~~~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~ 686 (842)
+++.+.++++++++. +++||+||++|+++ ++.++|++++++|+|+|+++||+.+.... ..|..
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~-----~~~~~--- 268 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAG-----LQGAL--- 268 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTT-----CCCTT---
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccc-----ccccc---
Confidence 999999999999875 68999999999987 78999999999999999999998654211 11211
Q ss_pred CccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHH
Q psy16199 687 KLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQT 765 (842)
Q Consensus 687 ~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~ 765 (842)
....||+||++++|.++++|+++++.++ ++|||++|||.|++||.+++++|||+||+||+++++||+++.++.++|+.
T Consensus 269 -~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~ 347 (367)
T 3zwt_A 269 -RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEA 347 (367)
T ss_dssp -TTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHH
T ss_pred -ccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHHH
Confidence 2467999999999999999999999985 69999999999999999999999999999999998899999999999999
Q ss_pred HHHhcCC-CccccCCC
Q psy16199 766 LLYLKST-QLKGWDGQ 780 (842)
Q Consensus 766 ~m~~~g~-~i~~~~~~ 780 (842)
+|.+.|+ +++|++|.
T Consensus 348 ~m~~~G~~~i~e~~G~ 363 (367)
T 3zwt_A 348 LLKEQGFGGVTDAIGA 363 (367)
T ss_dssp HHHHTTCSSHHHHTTG
T ss_pred HHHHcCCCCHHHhhCc
Confidence 9999999 99988875
No 5
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=100.00 E-value=7.9e-47 Score=411.05 Aligned_cols=290 Identities=19% Similarity=0.212 Sum_probs=248.1
Q ss_pred ccccCCcccccCCCCCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccchh
Q psy16199 463 KKLNSDGVSLQNGLPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGYQ 539 (842)
Q Consensus 463 ~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~d 539 (842)
+..|.|||++|+|+|+. ..+.++.+.++ +|| +++|||+.||+|||+ |+||++ .++||+ |||||.|++
T Consensus 44 Gl~~~NPv~lAaG~~~~----~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~--~~~iN~----~G~~n~G~~ 113 (345)
T 3oix_A 44 SFDFDNCLMNAAGVYCM----TREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTK--LGSINS----MGLPNLGIN 113 (345)
T ss_dssp TEEESCSEEECTTSSCS----SHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECS--SEEEEC----CCCCBSCHH
T ss_pred CEECCCCCEEcCCCCCC----CHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecc--cchhcc----CCCCChhHH
Confidence 56699999999999976 26888888877 566 999999999999999 899987 789999 999999999
Q ss_pred hhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHHHHhhcCcC-EEEEeccCCCCCCCCCCcccCCCCHH
Q psy16199 540 AITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGAD-ALELNLSCPHGMGERGMGLACGQDPE 618 (842)
Q Consensus 540 ai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~~~~~agaD-~ielN~scP~~~~~~~~G~~~~~~~~ 618 (842)
+...+...... +..+.|+|+||+ |.++++|.+++++++++++| +||||+||||+. + +..++++++
T Consensus 114 ~~~~~l~~~~~---------~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~---G-~~~l~~~~e 179 (345)
T 3oix_A 114 YYLDYVTELQK---------QPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNVP---G-XPQIAYDFE 179 (345)
T ss_dssp HHHHHHHHHHH---------STTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST---T-CCCGGGCHH
T ss_pred HHHHHHHHHhh---------ccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC---C-chhhcCCHH
Confidence 98875542100 011379999996 68999999999999987866 999999999975 3 477889999
Q ss_pred HHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCcc-ccCCCCCCCCCcccCCCccccCCCCCC
Q psy16199 619 MVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGL-MSLSADGNPWPAVGTKKLTTYGGVSGN 697 (842)
Q Consensus 619 ~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~-~~~~~~~~~~p~~~~~~~~~~gG~sG~ 697 (842)
.+.+++++|++.+++||+||++|+ .+..+++++++++|+++|+++||+... +.++++ .+.|.+ ...+..||+||+
T Consensus 180 ~l~~il~av~~~~~~PV~vKi~p~-~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~-~~~~~~--~~~~~~gGlSG~ 255 (345)
T 3oix_A 180 TTDQILSEVFTYFTKPLGIKLPPY-FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIE-DETVVI--XPKNGFGGIGGD 255 (345)
T ss_dssp HHHHHHHHHTTTCCSCEEEEECCC-CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEE-TTEESC--SGGGGEEEEEEG
T ss_pred HHHHHHHHHHHHhCCCeEEEECCC-CCHHHHHHHHHHhCCCceEEEEeecccccceeec-cCcccc--ccccccCCcCCc
Confidence 999999999999999999999998 478999999999999888888776431 234444 222322 124568999999
Q ss_pred ccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcCC-Ccc
Q psy16199 698 ATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLK 775 (842)
Q Consensus 698 ~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~-~i~ 775 (842)
+++|+++++++++++.++ ++|||++|||.|++|+.+++++|||+|||||++++.||+++.+++++|+.||++.|+ +++
T Consensus 256 ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~~~l~~~G~~si~ 335 (345)
T 3oix_A 256 YVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKELXAIMTEKGYETLE 335 (345)
T ss_dssp GGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHHTCCSGG
T ss_pred cccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999999985 699999999999999999999999999999998779999999999999999999999 999
Q ss_pred ccCCC
Q psy16199 776 GWDGQ 780 (842)
Q Consensus 776 ~~~~~ 780 (842)
|++|.
T Consensus 336 e~~G~ 340 (345)
T 3oix_A 336 DFRGK 340 (345)
T ss_dssp GTTTC
T ss_pred HHHhH
Confidence 99886
No 6
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=100.00 E-value=6.8e-46 Score=410.50 Aligned_cols=290 Identities=21% Similarity=0.273 Sum_probs=239.0
Q ss_pred cccccCCcccccCC-CCCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccc
Q psy16199 462 LKKLNSDGVSLQNG-LPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSG 537 (842)
Q Consensus 462 ~~~~~~~~~g~~~g-~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G 537 (842)
++..|.||||+|+| |||+ +|.+..+.++ +|| ++||||+.||+|||+ |+||+++ .+||+ |||||.|
T Consensus 42 ~Gl~f~NPvglAaG~~~~~-----~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~--~~iN~----~G~~n~G 110 (354)
T 3tjx_A 42 LNNTFANPFMNAAGVMCTT-----TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL--GSINS----MGLPNNG 110 (354)
T ss_dssp TTEEESSSEEECTTSSCSS-----HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT--EEEEC----CCCCBCC
T ss_pred CCEEcCCCcEEccCCCCCC-----HHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEccc--ccccc----cccCCHH
Confidence 36779999999999 9999 9999999987 566 999999999999999 9999964 58999 9999999
Q ss_pred hhhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHHHHhhc---CcCEEEEeccCCCCCCCCCCcccCC
Q psy16199 538 YQAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKA---GADALELNLSCPHGMGERGMGLACG 614 (842)
Q Consensus 538 ~dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~~~~~a---gaD~ielN~scP~~~~~~~~G~~~~ 614 (842)
+++...+...+.. ..+.|+|+||+ +.++++|.+.++++++. ++|+||||+||||+++ +..++
T Consensus 111 ~~~~~~~~~~~~~----------~~~~pvivsi~-g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g----~~~l~ 175 (354)
T 3tjx_A 111 FDFYLAYAAEQHD----------YGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPG----KPQVA 175 (354)
T ss_dssp HHHHHHHHHHTCC----------TTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------CT
T ss_pred HHHHHHHHHHhhc----------cCCceEEEEEe-cCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcc----hhhhc
Confidence 9987765432111 12379999997 67899998888877653 7999999999999865 34557
Q ss_pred CCHHHHHHHHHHHHhhCCccEEEEecCChhc--HHHHHHHHHHC-CCCEEEEecCCCccccCCCCCCCCCcccCCCcccc
Q psy16199 615 QDPEMVRNISLWVRSSVKIPFFVKLTPNITN--ITDIAKAAYEG-KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTY 691 (842)
Q Consensus 615 ~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~--~~~~a~~~~~~-G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~ 691 (842)
.+++.+.++++++++.+++|+++|++|++++ ....+..+.+. ++++++.+||+...+.++.+. ..+.. +.++..
T Consensus 176 ~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~-~~~~~--~~~~~~ 252 (354)
T 3tjx_A 176 YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAET-ESVVI--KPKQGF 252 (354)
T ss_dssp TSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTT-TEESC--SGGGGE
T ss_pred cCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheeccccccccccccc-ccccc--cCcccc
Confidence 8999999999999999999999999999874 34555555554 566777778776555555542 22322 345678
Q ss_pred CCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcC
Q psy16199 692 GGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKS 771 (842)
Q Consensus 692 gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g 771 (842)
||+||++++|.++++++++++.++++|||++|||.|++||+++|++|||+|||||+++++||+++.+|+++|++||+++|
T Consensus 253 GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~~~G 332 (354)
T 3tjx_A 253 GGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKR 332 (354)
T ss_dssp EEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHT
T ss_pred cccCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999998789999999999999999999999999999999999999999999999999999999
Q ss_pred C-CccccCCC
Q psy16199 772 T-QLKGWDGQ 780 (842)
Q Consensus 772 ~-~i~~~~~~ 780 (842)
+ +++|++|+
T Consensus 333 ~~si~e~~G~ 342 (354)
T 3tjx_A 333 YQTLDEFRGK 342 (354)
T ss_dssp CCSGGGTTTC
T ss_pred CCCHHHHhCh
Confidence 9 99999986
No 7
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=100.00 E-value=7.4e-45 Score=406.60 Aligned_cols=288 Identities=25% Similarity=0.284 Sum_probs=243.7
Q ss_pred ccccCCcccccCCCCCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccchh
Q psy16199 463 KKLNSDGVSLQNGLPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGYQ 539 (842)
Q Consensus 463 ~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~d 539 (842)
+..|.||||+|||+||+ ++.++.+.++ +|| ++|+||+.||+|||+ |+||++++.++||+ |||||.|++
T Consensus 88 Gl~~~NPvglAAG~dk~-----~~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~----~GfnN~G~~ 158 (443)
T 1tv5_A 88 HLDFINPFGVAAGFDKN-----GVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINS----CGFNNMGCD 158 (443)
T ss_dssp TEEESSSEEECTTTTTT-----CSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEEC----CCSCBSCHH
T ss_pred CEEeCCCcEECCcccCc-----cHHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeec----cccCChhHH
Confidence 45699999999999999 7778888776 445 999999999999999 99999999999999 999999999
Q ss_pred hhhcCccccccccccccccccccccceEEEeccCCC-----HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCC
Q psy16199 540 AITFHPETHQAHVTDECTGCTLCLSILIASIMCTYN-----KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACG 614 (842)
Q Consensus 540 ai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~-----~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~ 614 (842)
............... .......|+++||. ++. .++|.++++++.+ ++|+||||+||||+. |...+
T Consensus 159 ~~~~~l~~~~~~~~~---~~~~~~~~vgvni~-~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~-----Glr~l 228 (443)
T 1tv5_A 159 KVTENLILFRKRQEE---DKLLSKHIVGVSIG-KNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP-----GLRDN 228 (443)
T ss_dssp HHHHHHHHHHHHHHH---CSTTTTCEEEEEEC-CCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST-----TGGGG
T ss_pred HHHHHHHHHhhhccc---ccccCCceEEEEec-CcccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCc-----ccccc
Confidence 888755321000000 00011258999996 444 7899999999987 899999999999986 34456
Q ss_pred CCHHHHHHHHHHHHhh--------------------------------------------------CCcc-EEEEecCCh
Q psy16199 615 QDPEMVRNISLWVRSS--------------------------------------------------VKIP-FFVKLTPNI 643 (842)
Q Consensus 615 ~~~~~~~~ii~~v~~~--------------------------------------------------~~~P-v~vKl~p~~ 643 (842)
++++.+.+++++|+++ .++| |+||++|++
T Consensus 229 q~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~ 308 (443)
T 1tv5_A 229 QEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDL 308 (443)
T ss_dssp GSHHHHHHHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCC
T ss_pred cCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCC
Confidence 9999999999999864 3689 999999998
Q ss_pred h--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEE
Q psy16199 644 T--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPIL 720 (842)
Q Consensus 644 ~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi 720 (842)
+ ++.++|+.++++|+|+|+++||+... ++++. .....||+||++++|.++++++++++.++ ++|||
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI~v~ntt~~~--~d~~~---------~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVI 377 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGMIISNTTTQI--NDIKS---------FENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII 377 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCBSCC--CCCGG---------GTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCccc--ccccc---------cccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEE
Confidence 7 78999999999999999999998632 22210 12357999999999999999999999984 69999
Q ss_pred EecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 721 GIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 721 ~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
++|||.|++||.++|++|||+|||||++++.||+++.+++++|+.||.+.|+ +++|++|.
T Consensus 378 g~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l~~~l~~~G~~si~e~~G~ 438 (443)
T 1tv5_A 378 ASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGR 438 (443)
T ss_dssp EESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSSSGGGTTT
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHHHHHHHHHHHHhCCCCHHHHhhh
Confidence 9999999999999999999999999999988999999999999999999999 99999876
No 8
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=4.4e-40 Score=358.53 Aligned_cols=291 Identities=20% Similarity=0.255 Sum_probs=243.9
Q ss_pred ccccCCcccccCCC-CCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccch
Q psy16199 463 KKLNSDGVSLQNGL-PKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGY 538 (842)
Q Consensus 463 ~~~~~~~~g~~~g~-dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~ 538 (842)
+..+.|||++|+|+ |++ .+.+..+.+. +|+ ++++||+.|+.+||+ |+|++. +.++|+ +||+|.|.
T Consensus 8 g~~l~npv~~Aag~~~~~-----~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~--~~~in~----~g~~~~g~ 76 (311)
T 1jub_A 8 NAKFANPFMNASGVHCMT-----IEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLE--LGSINS----MGLPNLGF 76 (311)
T ss_dssp TEEESSSEEECTTSSCSS-----HHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEET--TEEEEC----CCCCBSCH
T ss_pred CEEcCCCcEECCCCCCCC-----HHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecc--cceeec----CCCCCccH
Confidence 45689999999999 988 7888887766 455 999999999999999 899987 679999 99999999
Q ss_pred hhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHHHHhhcCcC-EEEEeccCCCCCCCCCCcccCCCCH
Q psy16199 539 QAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGAD-ALELNLSCPHGMGERGMGLACGQDP 617 (842)
Q Consensus 539 dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~~~~~agaD-~ielN~scP~~~~~~~~G~~~~~~~ 617 (842)
+....+........ ..+.|+++|++ +.++++|.+++++++++|+| +||||+|||+..+ +..++.++
T Consensus 77 ~~~~~~~~~~~~~~--------~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g----~~~~g~~~ 143 (311)
T 1jub_A 77 DYYLDYVLKNQKEN--------AQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNVPG----EPQLAYDF 143 (311)
T ss_dssp HHHHHHHHHHHHHT--------CSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSS----CCCGGGCH
T ss_pred HHHHHHHHHHHHhc--------CCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCC----cccccCCH
Confidence 87655432110000 00379999996 68999999999999999999 9999999998732 45667899
Q ss_pred HHHHHHHHHHHhhCCccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCC
Q psy16199 618 EMVRNISLWVRSSVKIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695 (842)
Q Consensus 618 ~~~~~ii~~v~~~~~~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~s 695 (842)
+.+.++++++++.+++||++|++++++ ++.++|+.++++|+|+|+++||+...+.++++. ..|.+ ......||+|
T Consensus 144 e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~-~~~~~--~~~~~~gG~s 220 (311)
T 1jub_A 144 EATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEA-ESVVI--KPKDGFGGIG 220 (311)
T ss_dssp HHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTT-TEESC--SGGGGEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCC-CCccc--ccCCCCCccc
Confidence 999999999999999999999999864 567889999999999999999974323333321 12222 1224678999
Q ss_pred CCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcCC-C
Q psy16199 696 GNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-Q 773 (842)
Q Consensus 696 G~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~-~ 773 (842)
|++++|.++++++++++.++ ++|||++|||+|++|+.+++++|||+|||||+++++||+++.+++++|+.||.+.|+ +
T Consensus 221 g~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~~~l~~~g~~s 300 (311)
T 1jub_A 221 GAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQS 300 (311)
T ss_dssp SGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHHHTCCS
T ss_pred cccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999985 699999999999999999999999999999999976899999999999999999999 9
Q ss_pred ccccCCC
Q psy16199 774 LKGWDGQ 780 (842)
Q Consensus 774 i~~~~~~ 780 (842)
++|++|.
T Consensus 301 i~e~~g~ 307 (311)
T 1jub_A 301 IADFHGK 307 (311)
T ss_dssp GGGTTTC
T ss_pred HHHHhCh
Confidence 9999875
No 9
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=100.00 E-value=2.8e-38 Score=344.77 Aligned_cols=302 Identities=23% Similarity=0.296 Sum_probs=243.8
Q ss_pred cccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcceee
Q psy16199 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLN 424 (842)
Q Consensus 345 ~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~n 424 (842)
|.++++++.|++++||+++|+++++.+.+.++.+.+.|+|++++||++.++.. +|+.||+.+. ..+++|
T Consensus 1 ~~dl~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~-gn~~pr~~~~----------~~~~in 69 (314)
T 2e6f_A 1 MMCLKLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRD-GNPEPRYMAF----------PLGSIN 69 (314)
T ss_dssp -CCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBC-CSCSCCEEEE----------TTEEEE
T ss_pred CCCcceEECCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccC-CCCCCcEEec----------ccceee
Confidence 35789999999999999999988788899999999999999999999998764 7888887653 134555
Q ss_pred eEeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhccccccCCcccccCCCCCCCCCChhHHHHhhhhhhCcccccccc
Q psy16199 425 IELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTN 504 (842)
Q Consensus 425 ~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~~G~~~g~vt~ 504 (842)
. .++.|
T Consensus 70 ~---------------~g~~~----------------------------------------------------------- 75 (314)
T 2e6f_A 70 S---------------MGLPN----------------------------------------------------------- 75 (314)
T ss_dssp C---------------CCCCB-----------------------------------------------------------
T ss_pred c---------------CCCCC-----------------------------------------------------------
Confidence 5 22222
Q ss_pred CccCCCcceeEeeccCCccccCCccccCCCccchhhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHH
Q psy16199 505 YTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSK 584 (842)
Q Consensus 505 ~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~G~dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~ 584 (842)
.|.+....+.+... +..+.|+++||. +.++++|.++++
T Consensus 76 -------------------------------~g~~~~~~~~~~~~----------~~~~~p~~~~i~-g~~~~~~~~~a~ 113 (314)
T 2e6f_A 76 -------------------------------LGFDFYLKYASDLH----------DYSKKPLFLSIS-GLSVEENVAMVR 113 (314)
T ss_dssp -------------------------------SCHHHHHHHHHHTC----------CTTTCCEEEEEC-CSSHHHHHHHHH
T ss_pred -------------------------------cCHHHHHHHHHHHh----------hcCCCcEEEEeC-CCCHHHHHHHHH
Confidence 22222111100000 000279999996 679999999999
Q ss_pred HHhhcCcC---EEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh--cHHHHHHHHHHCC-C
Q psy16199 585 KTEKAGAD---ALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT--NITDIAKAAYEGK-A 658 (842)
Q Consensus 585 ~~~~agaD---~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~--~~~~~a~~~~~~G-~ 658 (842)
+++++|+| +||||++||+..+ +..++.+++.+.++++++++.+++||++|++++++ ++.++|+.++++| +
T Consensus 114 ~~~~~g~d~~~~iein~~~P~~~g----~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~ 189 (314)
T 2e6f_A 114 RLAPVAQEKGVLLELNLSCPNVPG----KPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLV 189 (314)
T ss_dssp HHHHHHHHHCCEEEEECCCCCSTT----CCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTE
T ss_pred HHHHhCCCcCceEEEEcCCCCCCC----chhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCc
Confidence 99999999 9999999998732 45667899999999999999999999999999865 6778899999999 9
Q ss_pred CEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhC
Q psy16199 659 DGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAG 738 (842)
Q Consensus 659 d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G 738 (842)
|+|+++||+...+.++... ..|.+ ......||+||++++|.++++++++++.++++|||++|||+|++|+.+++++|
T Consensus 190 d~i~v~~~~~~~~~i~~~~-~~~~~--~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~G 266 (314)
T 2e6f_A 190 KFVTCVNSVGNGLVIDAES-ESVVI--KPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAG 266 (314)
T ss_dssp EEEEECCCEEEEECEETTT-TEESC--CGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHT
T ss_pred eEEEEeCCCCccccccCCC-CCccc--ccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcC
Confidence 9999999874323333221 12222 11245789999999999999999999998679999999999999999999999
Q ss_pred CCEEEEehhhhccCchhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 739 AHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 739 A~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
||+|||||++++++|+++++++++|+.||.++|+ +++|++|.
T Consensus 267 Ad~V~ig~~~l~~~p~~~~~i~~~l~~~~~~~g~~~i~~~~g~ 309 (314)
T 2e6f_A 267 ASMVQVGTALQEEGPGIFTRLEDELLEIMARKGYRTLEEFRGR 309 (314)
T ss_dssp CSSEEECHHHHHHCTTHHHHHHHHHHHHHHHHTCCSSTTTTTC
T ss_pred CCEEEEchhhHhcCcHHHHHHHHHHHHHHHHcCCCCHHHHhch
Confidence 9999999999976899999999999999999999 99999876
No 10
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=2.5e-35 Score=337.03 Aligned_cols=294 Identities=26% Similarity=0.331 Sum_probs=240.0
Q ss_pred ecceeEeecC-CCCccccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeeccccceeccccccCCCEEEEccCCCCCCC
Q psy16199 25 SKDLPDIERP-VAALPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~~~v~~~~~~~~~yd~lVlAtGs~~~~~ 103 (842)
|++|+|||+. .+||++.+++|.++++.+++++..+++++.||+|++++.++ ++++++++. ..||+||||||+..++.
T Consensus 145 G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~-~~v~~~~~~-~~~d~vvlAtG~~~~~~ 222 (456)
T 2vdc_G 145 GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG-RDASLPELR-RKHVAVLVATGVYKARD 222 (456)
T ss_dssp TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT-TTBCHHHHH-SSCSEEEECCCCCEECC
T ss_pred CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec-cEEEhhHhH-hhCCEEEEecCCCCCCC
Confidence 9999999996 89999999999999999999999999999999999999887 677776654 45999999999976778
Q ss_pred CCCCCCCccccCceehhcchHHHhhcc-cCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 104 IPIFQGLTEEMGFYTSKTFLPRVATSS-KKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 104 ~~i~~G~~~~~gv~~~~~~l~~~~~~~-~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
+++| |. +.++++++.+|+...+... ....|..|++ .....+++|+|||||++|+|+|..+.+.|+++||+++|++.
T Consensus 223 ~~ip-G~-~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g-~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 223 IKAP-GS-GLGNIVAALDYLTTSNKVSLGDTVEAYENG-SLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp TTCS-CC-TTTTEEEHHHHHHHHHHHHCTTTCSSCCTT-CSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCC-CC-cCCCcEEHHHHHHHhhhhhccccccccccc-ccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 8888 63 6789999999987654321 0011222221 01123445999999999999999999999878999999986
Q ss_pred ccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeec---ccCCCCee--ccCCceEEEECCEEEEccccCc
Q psy16199 183 TNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTE---QNEKGEWV--EDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 183 ~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~---~~~~G~~~--~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
..++..+.+++.+.++||++++++.++++. +++++.+|++.+.+ .+++|++. ..+|++.++++|.||+|+|+.|
T Consensus 300 ~~~p~~~~e~~~~~~~Gv~~~~~~~~~~i~-~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 300 KNMPGSQREVAHAEEEGVEFIWQAAPEGFT-GDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp TTCSSCHHHHHHHHHTTCEEECCSSSCCEE-EEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred cCCCCCHHHHHHHHHCCCEEEeCCCceEEe-CCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCC
Confidence 568888888888899999999999999997 45667666665432 24567653 3467778899999999999994
Q ss_pred CChh-HHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 258 LDND-VLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 258 ~~~~-l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
+... +++.+ |++++++|+|.||+.+++|+.|+|||+||++.++.+++.|+.+|+.||.+|+++|+++
T Consensus 379 ~~~~~~l~~~-gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~~ 446 (456)
T 2vdc_G 379 EDLPNAFDEP-ELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAK 446 (456)
T ss_dssp CCHHHHHHST-TSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhcccC-CeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3333 67766 8999999999999656999999999999999888899999999999999999999875
No 11
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=100.00 E-value=2.2e-34 Score=316.67 Aligned_cols=264 Identities=25% Similarity=0.325 Sum_probs=221.4
Q ss_pred ccccCCcccccCCCCCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccchh
Q psy16199 463 KKLNSDGVSLQNGLPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGYQ 539 (842)
Q Consensus 463 ~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~d 539 (842)
+..+.|||++++|+++. .+....+++. +|+ .+++++..++.+|++ |.|++.+++.++|+ +||+|.|.+
T Consensus 51 g~~l~npi~~aag~~~~-----~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~----~g~~~~g~~ 121 (336)
T 1f76_A 51 GLTFKNPLGLAAGLDKD-----GECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINR----MGFNNLGVD 121 (336)
T ss_dssp TEEESSSEEECTTSSTT-----CCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEEC----CCCCBCCHH
T ss_pred CEEcCCCcEeCcccCCc-----HHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeec----CCCCCcCHH
Confidence 56689999999999988 4556666665 454 889999999999998 89999999999999 999999988
Q ss_pred hhhcCccccccccccccccccccccceEEEeccCCC-------HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCccc
Q psy16199 540 AITFHPETHQAHVTDECTGCTLCLSILIASIMCTYN-------KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLA 612 (842)
Q Consensus 540 ai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~-------~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~ 612 (842)
....+.... . .+.|+++|+.. .. .++|.++++++.+ |+|+||+|++||++.+ ..
T Consensus 122 ~~~~~~~~~--~----------~~~~~~v~i~~-~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g-----~~ 182 (336)
T 1f76_A 122 NLVENVKKA--H----------YDGVLGINIGK-NKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTPG-----LR 182 (336)
T ss_dssp HHHHHHHHC--C----------CCSEEEEEECC-CTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTT-----GG
T ss_pred HHHHHHHhc--c----------cCCcEEEEecC-CCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCCC-----cc
Confidence 776643311 0 02589999963 44 7899999999986 9999999999998642 23
Q ss_pred CCCCHHHHHHHHHHHHhhC---------CccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCC
Q psy16199 613 CGQDPEMVRNISLWVRSSV---------KIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWP 681 (842)
Q Consensus 613 ~~~~~~~~~~ii~~v~~~~---------~~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p 681 (842)
..++++.+.+++++|++.+ ++||+||++++++ ++.++|+.++++|+|+|+++||+.+...+ . .+
T Consensus 183 ~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~--~---~~ 257 (336)
T 1f76_A 183 TLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLV--Q---GM 257 (336)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTS--T---TS
T ss_pred cccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccccccc--c---cc
Confidence 4578999999999999987 8999999999876 78899999999999999999997654211 1 11
Q ss_pred cccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHH
Q psy16199 682 AVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 682 ~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
. .....||+||+++.|.++++++++++.++ ++|||++|||.|++|+.++|++|||+|||||+++++||+++.+++
T Consensus 258 ~----~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~ 333 (336)
T 1f76_A 258 K----NCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIV 333 (336)
T ss_dssp T----TTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHH
T ss_pred c----ccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHH
Confidence 1 12357889999999999999999999875 699999999999999999999999999999999977899999998
Q ss_pred HHH
Q psy16199 761 TGL 763 (842)
Q Consensus 761 ~~l 763 (842)
++|
T Consensus 334 ~~l 336 (336)
T 1f76_A 334 THI 336 (336)
T ss_dssp HHC
T ss_pred hhC
Confidence 875
No 12
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=100.00 E-value=3.9e-33 Score=303.97 Aligned_cols=301 Identities=29% Similarity=0.423 Sum_probs=235.8
Q ss_pred ccccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCccee
Q psy16199 344 DLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFL 423 (842)
Q Consensus 344 ~~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 423 (842)
+..++++++.|++++||+++|++..+.+.+..+.+...|+|+++++|++..|.. +++.|+++.. ..+++
T Consensus 3 ~~~~l~~~~~g~~l~npi~~aag~~~~~~~~~~~~~~~g~G~~~~~si~~~p~~-g~~~p~l~~~----------~~g~~ 71 (311)
T 1ep3_A 3 ENNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHPRF-GNPTPRVAET----------ASGML 71 (311)
T ss_dssp CCTTTCEEETTEEESSSEEECTTSSTTSTTGGGTSCGGGSSCEEEEEECSSCBC-CCCSCCEEEE----------TTEEE
T ss_pred CCCccceEECCEECCCCcEECCCCCCCCHHHHHHHHhcCCCEEEeCeeccCccC-CCCCCeEEEC----------Ccccc
Confidence 346789999999999999999976655544444445789999999999988775 7888998742 13456
Q ss_pred eeEeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhccccccCCcccccCCCCCCCCCChhHHHHhhhhhhCccccccc
Q psy16199 424 NIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVT 503 (842)
Q Consensus 424 n~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~~G~~~g~vt 503 (842)
|..-+....++.|+ + .++..++ .
T Consensus 72 ~~~g~~~~~~~~~~---~-------------~~~~~~~-----------------~------------------------ 94 (311)
T 1ep3_A 72 NAIGLQNPGLEVIM---T-------------EKLPWLN-----------------E------------------------ 94 (311)
T ss_dssp ECCCCCBCCHHHHH---H-------------THHHHHH-----------------H------------------------
T ss_pred cccCCCCcCHHHHH---H-------------HHHHHHH-----------------h------------------------
Confidence 65222222233332 1 1122221 0
Q ss_pred cCccCCCcceeEeeccCCccccCCccccCCCccchhhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHH
Q psy16199 504 NYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELS 583 (842)
Q Consensus 504 ~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~G~dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a 583 (842)
. .+ +.|+++|+. +.++++|.+++
T Consensus 95 ----------------~-----------------------~~-----------------~~p~~v~l~-~~~~~~~~~~a 117 (311)
T 1ep3_A 95 ----------------N-----------------------FP-----------------ELPIIANVA-GSEEADYVAVC 117 (311)
T ss_dssp ----------------H-----------------------CT-----------------TSCEEEEEC-CSSHHHHHHHH
T ss_pred ----------------c-----------------------CC-----------------CCcEEEEEc-CCCHHHHHHHH
Confidence 0 01 179999996 46899999999
Q ss_pred HHHhh-cCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEE
Q psy16199 584 KKTEK-AGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVS 662 (842)
Q Consensus 584 ~~~~~-agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~ 662 (842)
+++++ +|+|+||||++||+... + |..++.+++.+.++++++++.+++||++|+++++.++.++++.++++|+|+|+
T Consensus 118 ~~~~~~~g~d~iei~~~~p~~~~-g--~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~ 194 (311)
T 1ep3_A 118 AKIGDAANVKAIELNISCPNVKH-G--GQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLT 194 (311)
T ss_dssp HHHTTSTTEEEEEEECCSEEGGG-T--TEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEE
T ss_pred HHHhccCCCCEEEEeCCCCCCCC-c--hhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEE
Confidence 99998 89999999999997521 1 56677899999999999999999999999999998889999999999999999
Q ss_pred EecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEE
Q psy16199 663 AINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742 (842)
Q Consensus 663 v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~V 742 (842)
++|+..+. .++.. ++.|.+. ...||++|+++.|.++++++++++.+ ++|||++|||.|++|+.+++++|||+|
T Consensus 195 v~~~~~g~-~i~~~-~~~~~~~----~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~~d~~~~l~~GAd~V 267 (311)
T 1ep3_A 195 MINTLMGV-RFDLK-TRQPILA----NITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQDVLEMYMAGASAV 267 (311)
T ss_dssp ECCCEEEC-CBCTT-TCSBSST----TSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred EeCCCccc-ccCcc-cCCcccc----CCCCcccCccchHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 99986443 12221 1222221 23578899988888899999999988 799999999999999999999999999
Q ss_pred EEehhhhccCchhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 743 QICSAVQNQDFTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 743 qv~ta~l~~gp~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
|+||+++. +|+++.+++++++.||.+.|+ +++|++|.
T Consensus 268 ~vg~~~l~-~p~~~~~i~~~l~~~~~~~g~~~~~~~~g~ 305 (311)
T 1ep3_A 268 AVGTANFA-DPFVCPKIIDKLPELMDQYRIESLESLIQE 305 (311)
T ss_dssp EECTHHHH-CTTHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred EECHHHHc-CcHHHHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 99999995 799999999999999999998 88888764
No 13
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.96 E-value=1.1e-28 Score=268.24 Aligned_cols=267 Identities=18% Similarity=0.191 Sum_probs=191.4
Q ss_pred eecceeEeecCCCCc-----cccc--------cCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc------ccceeccc
Q psy16199 24 LSKDLPDIERPVAAL-----PDSS--------EIPQYRLPFDAVNFEVELVKDLGVKIECERSLST------RDITIEKL 84 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG-----~~~~--------~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~------~~v~~~~~ 84 (842)
.|++|+|||+...|| ++.. ++|....+.+++++..+++++.++++...+.... ..+..++.
T Consensus 26 ~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 105 (314)
T 4a5l_A 26 SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEG 105 (314)
T ss_dssp TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTC
T ss_pred CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCC
Confidence 589999999975444 3321 2333344568888888999999999887764421 11233444
Q ss_pred cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHH
Q psy16199 85 RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCAT 164 (842)
Q Consensus 85 ~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~ 164 (842)
..+.||+||||||+. |+.+++| |. +....... .+ |..|+.......+++|+|||||++|+|+|.
T Consensus 106 ~~~~~~~liiATG~~-~~~~~ip-G~-~~~~~~~~-~~------------~~~~~~~~~~~~~~~vvViGgG~ig~e~A~ 169 (314)
T 4a5l_A 106 KEVLTKSVIIATGAT-AKRMHVP-GE-DKYWQNGV-SA------------CAICDGAVPIFRNKVLMVVGGGDAAMEEAL 169 (314)
T ss_dssp CEEEEEEEEECCCEE-ECCCCCT-TH-HHHBTTTE-ES------------CHHHHTTSGGGTTSEEEEECSSHHHHHHHH
T ss_pred eEEEEeEEEEccccc-ccccCCC-cc-ccccccce-ee------------ehhhhhhhhhcCCCeEEEECCChHHHHHHH
Confidence 556799999999998 8888998 64 22211110 01 111111111123445999999999999999
Q ss_pred HHHHcCCcEEEEEEeecCccccCCHHH-HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEE
Q psy16199 165 SALRCGANKVLVVFRKGCTNIRAVPEE-VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIK 243 (842)
Q Consensus 165 ~l~~~G~~~Vtlv~r~~~~~~~~~~~~-~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~ 243 (842)
.|.+.|.+ ||+++|... ....... .......++..+....+.++...+....++.+.+.. .++..+
T Consensus 170 ~l~~~G~~-Vt~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~~~ 236 (314)
T 4a5l_A 170 HLTKYGSK-VIILHRRDA--FRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLV----------SGEYKV 236 (314)
T ss_dssp HHTTTSSE-EEEECSSSS--CCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETT----------TCCEEE
T ss_pred HHHHhCCe-eeeeccccc--ccccchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecc----------ccccee
Confidence 99999975 999998763 2233332 333456688888888888887666667777766532 345578
Q ss_pred EECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCc-hhHHHHHHHHHHHHHHHHHHH
Q psy16199 244 LKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLS-DTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 244 i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~-~~~~~A~~~G~~aA~~I~~~L 322 (842)
+++|.|++++|++ |++++++. +++++++|.+ || ++++||+|||||+|||+.++ +++..|+.||+.||.+|++||
T Consensus 237 i~~d~vi~a~G~~-pn~~~l~~--~~~~~~~G~i-v~-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 237 VPVAGLFYAIGHS-PNSKFLGG--QVKTADDGYI-LT-EGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp EECSEEEECSCEE-ESCGGGTT--SSCBCTTSCB-CC-BTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccccceEecccc-cChhHhcc--cceEcCCeeE-eC-CCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 67777764 4788888877 66 57999999999999999765 578899999999999999999
Q ss_pred Hh
Q psy16199 323 QE 324 (842)
Q Consensus 323 ~~ 324 (842)
+.
T Consensus 312 ~~ 313 (314)
T 4a5l_A 312 QT 313 (314)
T ss_dssp HT
T ss_pred hc
Confidence 74
No 14
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.95 E-value=6.3e-28 Score=262.47 Aligned_cols=265 Identities=20% Similarity=0.240 Sum_probs=187.7
Q ss_pred eecceeEeecCCCCcccc--ccC---CCCCC--CHHHHHHHHHHHHhcCcEEEeceeecc-----ccceeccccccCCCE
Q psy16199 24 LSKDLPDIERPVAALPDS--SEI---PQYRL--PFDAVNFEVELVKDLGVKIECERSLST-----RDITIEKLRKDGYTA 91 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~--~~i---P~~~~--~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~ 91 (842)
.|++|+||||+.+||.+. .++ |.+.. ..++......+..+.+..+..+..+.. ......+...+.||+
T Consensus 28 ~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (312)
T 4gcm_A 28 ANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKA 107 (312)
T ss_dssp TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEE
T ss_pred CCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeeeeeeecceeeccCCeEEEece
Confidence 589999999999999753 233 44432 347777777888888888777654331 111222344567999
Q ss_pred EEEccCCCCCCCCCCCCCCcccc--CceehhcchHHHhhcccCCccCCCCCCCCCCC-CCcEEEEcCChhHHHHHHHHHH
Q psy16199 92 IFIGIGKPNANVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTAFDCATSALR 168 (842)
Q Consensus 92 lVlAtGs~~~~~~~i~~G~~~~~--gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~-~~kVvVIGgG~~g~e~A~~l~~ 168 (842)
||||||++ |+.+++| |..... ++.+ .. .|+. ... +++|+|||||++|+|+|..|.+
T Consensus 108 liiAtGs~-~~~~~ip-G~~~~~~~~v~~----~~------------~~~~---~~~~~k~vvViGgG~ig~E~A~~l~~ 166 (312)
T 4gcm_A 108 VIIATGAE-YKKIGVP-GEQELGGRGVSY----CA------------VCDG---AFFKNKRLFVIGGGDSAVEEGTFLTK 166 (312)
T ss_dssp EEECCCEE-ECCCCCT-TTTTTBTTTEES----CH------------HHHG---GGGTTCEEEEECCSHHHHHHHHHHTT
T ss_pred eEEcccCc-cCcCCCC-ChhhhCCccEEe----ee------------ccCc---cccCCCEEEEECCCHHHHHHHHHHHh
Confidence 99999998 8889998 654322 2221 11 1111 222 3459999999999999999999
Q ss_pred cCCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCE
Q psy16199 169 CGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANY 248 (842)
Q Consensus 169 ~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~ 248 (842)
.|. +||+++|+++ .++........+.+.++.+.....+..+...+........... .+++...+++|.
T Consensus 167 ~g~-~Vtlv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~d~ 234 (312)
T 4gcm_A 167 FAD-KVTIVHRRDE-LRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTST----------KDGSEETHEADG 234 (312)
T ss_dssp TCS-EEEEECSSSS-CCSCHHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEET----------TTCCEEEEECSE
T ss_pred cCC-EEEEEecccc-cCcchhHHHHHHHhcCcceeeecceeeeeccccccccceeeee----------cCCceeEEeeee
Confidence 986 5999999874 3333333334456678888777666665533333332222221 234567899999
Q ss_pred EEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC-CchhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 249 IISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN-LSDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 249 Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~-~~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|++++|.. |+..+.+.+ ++. +++|+|.|| ++++||+|||||+|||+. ++++++.|+.||+.||.+|++||++.
T Consensus 235 v~~~~g~~-~~~~~~~~~-g~~-~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~l 308 (312)
T 4gcm_A 235 VFIYIGMK-PLTAPFKDL-GIT-NDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHL 308 (312)
T ss_dssp EEECSCEE-ESCGGGGGG-TCB-CTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCC-cCchhHHhc-cee-cCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999 677777776 554 567999999 699999999999999986 45789999999999999999999764
No 15
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.95 E-value=3.9e-26 Score=248.48 Aligned_cols=265 Identities=19% Similarity=0.225 Sum_probs=201.2
Q ss_pred eecceeEeecCCCCccccc-----cCCCCC--CCHHHHHHHHHHHHhcCcEEEeceeecc------ccceeccccccCCC
Q psy16199 24 LSKDLPDIERPVAALPDSS-----EIPQYR--LPFDAVNFEVELVKDLGVKIECERSLST------RDITIEKLRKDGYT 90 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~~-----~iP~~~--~~~~~v~~~~~~l~~~gV~i~~~~~v~~------~~v~~~~~~~~~yd 90 (842)
.|++|+|+|+. +||.+.+ .+|.+. .+.++.++..+++++.|+++++.+.... ..+..+++..+.||
T Consensus 37 ~g~~v~lie~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 115 (323)
T 3f8d_A 37 YMLKTLVIGET-PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKAD 115 (323)
T ss_dssp TTCCEEEEESS-TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEE
T ss_pred CCCcEEEEecc-CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcC
Confidence 48999999999 8998753 334433 2357788888889999999988443321 11334444456799
Q ss_pred EEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHH
Q psy16199 91 AIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALR 168 (842)
Q Consensus 91 ~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~ 168 (842)
+||+|||+. ++.+++| |.... .++.+. .+.+. . ....++|+|||+|++|+|+|..|.+
T Consensus 116 ~lvlAtG~~-~~~~~i~-g~~~~~~~~~~~~-~~~~~---~--------------~~~~~~v~vvG~G~~~~e~a~~l~~ 175 (323)
T 3f8d_A 116 SVILGIGVK-RRKLGVP-GEQEFAGRGISYC-SVADA---P--------------LFKNRVVAVIGGGDSALEGAEILSS 175 (323)
T ss_dssp EEEECCCCE-ECCCCCT-TTTTTBTTTEESC-HHHHG---G--------------GGTTCEEEEECCSHHHHHHHHHHHH
T ss_pred EEEECcCCC-CccCCCC-chhhhcCCceEEe-ccCCH---h--------------HcCCCEEEEECCCHHHHHHHHHHHH
Confidence 999999998 8777887 54332 333221 11110 0 1223459999999999999999999
Q ss_pred cCCcEEEEEEeecCccccCCHHHHHHHHhc-CcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECC
Q psy16199 169 CGANKVLVVFRKGCTNIRAVPEEVQLAWEE-KCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKAN 247 (842)
Q Consensus 169 ~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~-gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D 247 (842)
.|. +|+++++++. +...+...+.+.+. ||++++++.++++. .++++..|++.+.. +|+..++++|
T Consensus 176 ~g~-~v~~~~~~~~--~~~~~~~~~~~~~~~gv~~~~~~~v~~i~-~~~~~~~v~~~~~~----------~g~~~~~~~D 241 (323)
T 3f8d_A 176 YST-KVYLIHRRDT--FKAQPIYVETVKKKPNVEFVLNSVVKEIK-GDKVVKQVVVENLK----------TGEIKELNVN 241 (323)
T ss_dssp HSS-EEEEECSSSS--CCSCHHHHHHHHTCTTEEEECSEEEEEEE-ESSSEEEEEEEETT----------TCCEEEEECS
T ss_pred hCC-eEEEEEeCCC--CCcCHHHHHHHHhCCCcEEEeCCEEEEEe-ccCceeEEEEEECC----------CCceEEEEcC
Confidence 986 5999999863 33355556666655 99999999999998 45677778877521 3555689999
Q ss_pred EEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC---chhHHHHHHHHHHHHHHHHHHHHh
Q psy16199 248 YIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL---SDTTVESVNDGKTAAWHIHKYIQE 324 (842)
Q Consensus 248 ~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~---~~~~~~A~~~G~~aA~~I~~~L~~ 324 (842)
.||+++|++ |+.++++.+ |++++++|++.|| ++++|+.|+|||+|||+.. +.++..|+.||+.||.+|.++|++
T Consensus 242 ~vv~a~G~~-p~~~~~~~~-g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 242 GVFIEIGFD-PPTDFAKSN-GIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp EEEECCCEE-CCHHHHHHT-TCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCC-CChhHHhhc-CeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHH
Confidence 999999999 787888887 8999999999999 5899999999999999874 688999999999999999999987
Q ss_pred cC
Q psy16199 325 KN 326 (842)
Q Consensus 325 ~~ 326 (842)
+.
T Consensus 319 ~~ 320 (323)
T 3f8d_A 319 KK 320 (323)
T ss_dssp C-
T ss_pred hh
Confidence 53
No 16
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.94 E-value=1.7e-26 Score=250.64 Aligned_cols=266 Identities=23% Similarity=0.239 Sum_probs=195.5
Q ss_pred eec-ceeEeecCCCCcccccc-----CCCC---CCCHHHHHHHHHHHHhcCcEEEeceeecc----c--cceeccccccC
Q psy16199 24 LSK-DLPDIERPVAALPDSSE-----IPQY---RLPFDAVNFEVELVKDLGVKIECERSLST----R--DITIEKLRKDG 88 (842)
Q Consensus 24 ~g~-~V~l~Ek~~~GG~~~~~-----iP~~---~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~--~v~~~~~~~~~ 88 (842)
.|+ +|+|+|++.+||.+... .|.+ ..+.++.++..+++++.|+++++.+.... . .++..++..+.
T Consensus 23 ~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~ 102 (311)
T 2q0l_A 23 GGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFE 102 (311)
T ss_dssp TTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEE
T ss_pred CCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEE
Confidence 488 99999998889876421 2322 23356777778888889999988543321 1 23333444567
Q ss_pred CCEEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHH
Q psy16199 89 YTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSA 166 (842)
Q Consensus 89 yd~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l 166 (842)
||+||+|||+. ++.+++| |.... .++++. .... .. ....++|+|||+|++|+|+|..|
T Consensus 103 ~~~vv~AtG~~-~~~~~~~-g~~~~~~~~~~~~-~~~~---~~--------------~~~~~~v~VvG~G~~g~e~A~~l 162 (311)
T 2q0l_A 103 AKSVIIATGGS-PKRTGIK-GESEYWGKGVSTC-ATCD---GF--------------FYKNKEVAVLGGGDTAVEEAIYL 162 (311)
T ss_dssp EEEEEECCCEE-ECCCCCB-THHHHBTTTEESC-HHHH---GG--------------GGTTSEEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCCCC-CCCCCCC-ChhhccCCcEEEe-ecCC---hh--------------hcCCCEEEEECCCHHHHHHHHHH
Confidence 99999999997 7777777 53222 233321 1111 10 12235599999999999999999
Q ss_pred HHcCCcEEEEEEeecCccccCCHHHHHHHHh-cCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEE
Q psy16199 167 LRCGANKVLVVFRKGCTNIRAVPEEVQLAWE-EKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLK 245 (842)
Q Consensus 167 ~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~-~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~ 245 (842)
.+.|. +|+++++++. +...+...+.+.+ .||++++++.++++..+++++..|++.+.. +|+..+++
T Consensus 163 ~~~g~-~Vtlv~~~~~--~~~~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~----------~g~~~~i~ 229 (311)
T 2q0l_A 163 ANICK-KVYLIHRRDG--FRCAPITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTA----------TNEKRELV 229 (311)
T ss_dssp HTTSS-EEEEECSSSS--CCSCHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETT----------TCCEEEEE
T ss_pred HhcCC-EEEEEeeCCc--cCCCHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecC----------CCceEEEe
Confidence 99986 5999998863 3445555566654 699999999999997544666667776421 34556899
Q ss_pred CCEEEEccccCcCChhHHhhcC---CcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHHHHH
Q psy16199 246 ANYIISAFGSTLLDNDVLEAIK---PVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHIHKY 321 (842)
Q Consensus 246 ~D~Vi~a~G~~~~~~~l~~~l~---gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I~~~ 321 (842)
+|.||+++|++ |+.++++.+. |++++++|+|.|| ++++|+.|+|||+|||+.. +.++..|+.||+.||.+|.++
T Consensus 230 ~D~vi~a~G~~-p~~~~l~~~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 307 (311)
T 2q0l_A 230 VPGFFIFVGYD-VNNAVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISY 307 (311)
T ss_dssp CSEEEECSCEE-ECCGGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEecCc-cChhhhhcccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999 6777777651 3788889999999 5899999999999999875 678999999999999999999
Q ss_pred HHh
Q psy16199 322 IQE 324 (842)
Q Consensus 322 L~~ 324 (842)
|++
T Consensus 308 l~~ 310 (311)
T 2q0l_A 308 LEH 310 (311)
T ss_dssp HHC
T ss_pred Hhh
Confidence 864
No 17
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.94 E-value=5.5e-27 Score=268.58 Aligned_cols=283 Identities=18% Similarity=0.233 Sum_probs=209.1
Q ss_pred ecceeEeecC-CCCccccccC-CCCCCCHHHHHHHHHHHHhcCcEEEeceeeccccceeccccccCCCEEEEccCCCCCC
Q psy16199 25 SKDLPDIERP-VAALPDSSEI-PQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNAN 102 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~~i-P~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~~~v~~~~~~~~~yd~lVlAtGs~~~~ 102 (842)
+++|+|||+. .+||++++++ |.+....+++.+..+++++.||++++++.++ +++++++. ...||+||||||+..++
T Consensus 31 ~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-~~V~~~~~-~~~~d~lVlAtGs~~~~ 108 (460)
T 1cjc_A 31 RAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG-RDVTVQEL-QDAYHAVVLSYGAEDHQ 108 (460)
T ss_dssp SCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-TTBCHHHH-HHHSSEEEECCCCCEEC
T ss_pred CCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-eEEEeccc-eEEcCEEEEecCcCCCC
Confidence 4999999996 8899998876 5665667888888888999999999999887 67777654 34699999999999557
Q ss_pred CCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHH---------------
Q psy16199 103 VIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSAL--------------- 167 (842)
Q Consensus 103 ~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~--------------- 167 (842)
.+++| |. +.++++++.+++.+.+... .+.........++|+|||+|++|+|+|..|.
T Consensus 109 ~~~ip-G~-~~~gv~~~~~~~~~~~~~~------d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a 180 (460)
T 1cjc_A 109 ALDIP-GE-ELPGVFSARAFVGWYNGLP------ENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAA 180 (460)
T ss_dssp CCCCT-TT-TSTTEEEHHHHHHHHTTCG------GGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHH
T ss_pred CCCCC-CC-CCCcEEEHHHHHHHhhcCc------cccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHH
Confidence 78898 64 5788999888876654321 0111000112344999999999999999998
Q ss_pred -----HcCCcEEEEEEeecCcc-------------ccC-------------------CH-------HHH-HHHHh-----
Q psy16199 168 -----RCGANKVLVVFRKGCTN-------------IRA-------------------VP-------EEV-QLAWE----- 197 (842)
Q Consensus 168 -----~~G~~~Vtlv~r~~~~~-------------~~~-------------------~~-------~~~-~~~~~----- 197 (842)
+.|.++|+|++|++... ++. .+ +.+ +.+.+
T Consensus 181 ~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (460)
T 1cjc_A 181 LGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVE 260 (460)
T ss_dssp HHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccc
Confidence 56877799999987431 110 00 011 12224
Q ss_pred ---------cCcEEecCCCceEEEccC-C-cEEEEEEEeecccC--CCCeeccCCceEEEECCEEEEccccCcCChhHHh
Q psy16199 198 ---------EKCEFLPFMSPVQVDVKD-N-KIAGMQFNRTEQNE--KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLE 264 (842)
Q Consensus 198 ---------~gV~i~~~~~v~~v~~~~-~-~v~~V~~~~~~~~~--~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~ 264 (842)
+||++++++.+.++...+ + ++.+|++.+..... ++.....+|+..+++||+||+++|++ |+. +
T Consensus 261 ~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~-p~~-l-- 336 (460)
T 1cjc_A 261 EAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK-SRP-I-- 336 (460)
T ss_dssp HHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE-CCC-C--
T ss_pred cccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC-CCC-C--
Confidence 789999999999997432 5 78888877543211 01111124555789999999999999 454 3
Q ss_pred hcCCc-ccCCCCCeeeCCCCCCCC-CCCeEEeccCCCCch-hHHHHHHHHHHHHHHHHHHHHh
Q psy16199 265 AIKPV-KLDKYGYPEVNYTTMATS-VPGVFCGGDTANLSD-TTVESVNDGKTAAWHIHKYIQE 324 (842)
Q Consensus 265 ~l~gl-~~~~~G~i~vd~~~~~Ts-~~gVfa~GD~~~~~~-~~~~A~~~G~~aA~~I~~~L~~ 324 (842)
.|+ .++++|++.+| +.++|+ .|+|||+|||+.++. .+..|+.+|+.+|.+|..+|.+
T Consensus 337 --~gl~~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 337 --DPSVPFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp --CTTSCCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 378 88988999999 678998 799999999987664 4678999999999999999876
No 18
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.94 E-value=2.8e-26 Score=248.87 Aligned_cols=266 Identities=22% Similarity=0.221 Sum_probs=198.7
Q ss_pred eecceeE-eecCCCCcccccc-----CCCCC---CCHHHHHHHHHHHHhcCcEEEeceeecc-----ccce--ecccccc
Q psy16199 24 LSKDLPD-IERPVAALPDSSE-----IPQYR---LPFDAVNFEVELVKDLGVKIECERSLST-----RDIT--IEKLRKD 87 (842)
Q Consensus 24 ~g~~V~l-~Ek~~~GG~~~~~-----iP~~~---~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~--~~~~~~~ 87 (842)
.|++|+| +||+.+||.+... .|.+. .+.++..+..++++++++++++++.+.. ..+. +......
T Consensus 26 ~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~ 105 (315)
T 3r9u_A 26 GGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE 105 (315)
T ss_dssp HTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEE
T ss_pred CCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEE
Confidence 5899999 9999889986432 23322 4458888888999999999999854431 1122 2111145
Q ss_pred CCCEEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHH
Q psy16199 88 GYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATS 165 (842)
Q Consensus 88 ~yd~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~ 165 (842)
.||+||+|||+. ++.+++| |.... .++++. .+.... ....++|+|||+|++|+|+|..
T Consensus 106 ~~d~lvlAtG~~-~~~~~~~-g~~~~~~~~~~~~-~~~~~~-----------------~~~~~~v~viG~g~~~~e~a~~ 165 (315)
T 3r9u_A 106 LAKAVIVCTGSA-PKKAGFK-GEDEFFGKGVSTC-ATCDGF-----------------FYKNKEVAVLGGGDTALEEALY 165 (315)
T ss_dssp EEEEEEECCCEE-ECCCCCB-TTTTTBTTTEESC-HHHHGG-----------------GGTTSEEEEECCBHHHHHHHHH
T ss_pred EeCEEEEeeCCC-CCCCCCC-ChhhcCCCeEEee-eccccc-----------------ccCcCEEEEECCCHHHHHHHHH
Confidence 799999999997 7777787 54332 233321 111110 1223459999999999999999
Q ss_pred HHHcCCcEEEEEEeecCccccCCHHHHHHH-HhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEE
Q psy16199 166 ALRCGANKVLVVFRKGCTNIRAVPEEVQLA-WEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 166 l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~-~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
|.+.|. +|+++++++. ++..+....++ .+.||++++++.++++..+++++.+|++.. .+|+..++
T Consensus 166 l~~~g~-~v~~~~~~~~--~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~-----------~~g~~~~~ 231 (315)
T 3r9u_A 166 LANICS-KIYLIHRRDE--FRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL-----------KDGSIRDL 231 (315)
T ss_dssp HHTTSS-EEEEECSSSS--CBSCHHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEEC-----------TTSCEEEE
T ss_pred HHhhCC-EEEEEEeCCC--CCCCHHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEc-----------CCCCeEEe
Confidence 999986 5999999863 34555555555 467999999999999986666787787762 13555689
Q ss_pred ECCEEEEccccCcCChhHHhh--cCC-cccCCCCCeeeCCCCCCCCCCCeEEeccCCC-CchhHHHHHHHHHHHHHHHHH
Q psy16199 245 KANYIISAFGSTLLDNDVLEA--IKP-VKLDKYGYPEVNYTTMATSVPGVFCGGDTAN-LSDTTVESVNDGKTAAWHIHK 320 (842)
Q Consensus 245 ~~D~Vi~a~G~~~~~~~l~~~--l~g-l~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~-~~~~~~~A~~~G~~aA~~I~~ 320 (842)
++|.||+++|++ |+..+++. ..| ++++++|++.|| ++++|+.|+|||+|||+. .++++..|+.||+.||.+|.+
T Consensus 232 ~~D~vv~a~G~~-p~~~~~~~~~~~g~l~~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 232 NVPGIFTFVGLN-VRNEILKQDDSKFLCNMEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp CCSCEEECSCEE-ECCGGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ecCeEEEEEcCC-CCchhhhcccccceeeecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHH
Confidence 999999999999 66667654 125 888899999999 599999999999999974 467899999999999999999
Q ss_pred HHHhc
Q psy16199 321 YIQEK 325 (842)
Q Consensus 321 ~L~~~ 325 (842)
+|+++
T Consensus 310 ~l~~~ 314 (315)
T 3r9u_A 310 YIESL 314 (315)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99864
No 19
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.94 E-value=2.3e-26 Score=252.04 Aligned_cols=267 Identities=20% Similarity=0.233 Sum_probs=199.8
Q ss_pred eecceeEeec----C-CCCccccc--------cCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc----cccee-----
Q psy16199 24 LSKDLPDIER----P-VAALPDSS--------EIPQYRLPFDAVNFEVELVKDLGVKIECERSLST----RDITI----- 81 (842)
Q Consensus 24 ~g~~V~l~Ek----~-~~GG~~~~--------~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~~----- 81 (842)
.|++|+|+|+ . .+||.+.+ ++|.+..+.++.++..+++++.|+++++++.+.. ..+.+
T Consensus 44 ~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~ 123 (338)
T 3itj_A 44 AEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFN 123 (338)
T ss_dssp TTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTC
T ss_pred CCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEec
Confidence 3999999999 3 68998754 2233333458888888999999999999884321 11222
Q ss_pred ccccccCCCEEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhH
Q psy16199 82 EKLRKDGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159 (842)
Q Consensus 82 ~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g 159 (842)
++.....||+||+|||+. ++.+++| |.... .++.+. .... ........++|+|||+|++|
T Consensus 124 ~~~~~~~~d~vvlAtG~~-~~~~~~~-g~~~~~~~~~~~~-~~~~---------------~~~~~~~~~~v~vvG~G~~g 185 (338)
T 3itj_A 124 EDAEPVTTDAIILATGAS-AKRMHLP-GEETYWQKGISAC-AVCD---------------GAVPIFRNKPLAVIGGGDSA 185 (338)
T ss_dssp SSSCCEEEEEEEECCCEE-ECCCCCT-THHHHBTTTEESC-HHHH---------------TTSGGGTTSEEEEECSSHHH
T ss_pred CCCcEEEeCEEEECcCCC-cCCCCCC-CchhccCccEEEc-hhcc---------------cchhhcCCCEEEEECCCHHH
Confidence 233445699999999997 7777777 53221 122221 1111 10001223459999999999
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCccccCCHHHHHHHHhc-CcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccC
Q psy16199 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEE-KCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238 (842)
Q Consensus 160 ~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~-gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~ 238 (842)
+|+|..|.+.|. +|+++++.+. +.......+.+.+. ||++++++.++++..+++++.+|++.+.. +
T Consensus 186 ~e~a~~l~~~g~-~v~~v~~~~~--~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~----------~ 252 (338)
T 3itj_A 186 CEEAQFLTKYGS-KVFMLVRKDH--LRASTIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTK----------K 252 (338)
T ss_dssp HHHHHHHTTTSS-EEEEECSSSS--CCSCHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETT----------T
T ss_pred HHHHHHHHhcCC-EEEEEEcCCc--cCCCHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECC----------C
Confidence 999999999986 5999999863 33455666667665 99999999999998666678888887631 3
Q ss_pred CceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHH
Q psy16199 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWH 317 (842)
Q Consensus 239 g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~ 317 (842)
|+..++++|.||+++|++ |+..+++. +++++++|++.+++++++|+.|+|||+|||+.. +.++..|+.+|+.||.+
T Consensus 253 g~~~~i~~D~vi~a~G~~-p~~~~~~~--~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 329 (338)
T 3itj_A 253 NEETDLPVSGLFYAIGHT-PATKIVAG--QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALD 329 (338)
T ss_dssp TEEEEEECSEEEECSCEE-ECCGGGBT--TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCEEEEEeCCC-CChhHhhC--ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHH
Confidence 455689999999999999 67677665 789999999997558999999999999999864 57899999999999999
Q ss_pred HHHHHHh
Q psy16199 318 IHKYIQE 324 (842)
Q Consensus 318 I~~~L~~ 324 (842)
|.++|++
T Consensus 330 i~~~l~~ 336 (338)
T 3itj_A 330 AEKYLTS 336 (338)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 9999975
No 20
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.94 E-value=3.6e-26 Score=250.01 Aligned_cols=264 Identities=16% Similarity=0.204 Sum_probs=195.0
Q ss_pred eecceeEeecCCCCcccccc-----CCCC---CCCHHHHHHHHHHHHhcCcEEEeceeecc--c-------cceeccccc
Q psy16199 24 LSKDLPDIERPVAALPDSSE-----IPQY---RLPFDAVNFEVELVKDLGVKIECERSLST--R-------DITIEKLRK 86 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~~~-----iP~~---~~~~~~v~~~~~~l~~~gV~i~~~~~v~~--~-------~v~~~~~~~ 86 (842)
.|++|+|+|+..+||.+... .|.+ ....++.++..+++++.|++++.++.... . .+...++..
T Consensus 30 ~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~ 109 (325)
T 2q7v_A 30 AQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGE 109 (325)
T ss_dssp TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCE
T ss_pred cCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCE
Confidence 48999999999889976431 2322 12347777788888999999987653321 1 122233344
Q ss_pred cCCCEEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHH
Q psy16199 87 DGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCAT 164 (842)
Q Consensus 87 ~~yd~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~ 164 (842)
+.||+||+|||+. ++.+++| |.... .++++. .+... . ....++|+|||+|.+|+|+|.
T Consensus 110 ~~~~~vv~AtG~~-~~~~~i~-g~~~~~~~~~~~~-~~~~~---~--------------~~~~~~v~VvG~G~~g~e~A~ 169 (325)
T 2q7v_A 110 YRAKAVILATGAD-PRKLGIP-GEDNFWGKGVSTC-ATCDG---F--------------FYKGKKVVVIGGGDAAVEEGM 169 (325)
T ss_dssp EEEEEEEECCCEE-ECCCCCT-TTTTTBTTTEESC-HHHHG---G--------------GGTTCEEEEECCSHHHHHHHH
T ss_pred EEeCEEEECcCCC-cCCCCCC-ChhhccCceEEEe-ccCCH---H--------------HcCCCEEEEECCCHHHHHHHH
Confidence 6799999999997 7777787 54332 223221 11111 0 122355999999999999999
Q ss_pred HHHHcCCcEEEEEEeecCccccCCHHHHHHHHh-cCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEE
Q psy16199 165 SALRCGANKVLVVFRKGCTNIRAVPEEVQLAWE-EKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIK 243 (842)
Q Consensus 165 ~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~-~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~ 243 (842)
.|.+.|. +|+++++.+. +...+...+.+.+ .||++++++.++++. .++++.+|++.+.. +|+..+
T Consensus 170 ~l~~~g~-~Vtlv~~~~~--~~~~~~~~~~l~~~~gv~i~~~~~v~~i~-~~~~v~~v~~~~~~----------~g~~~~ 235 (325)
T 2q7v_A 170 FLTKFAD-EVTVIHRRDT--LRANKVAQARAFANPKMKFIWDTAVEEIQ-GADSVSGVKLRNLK----------TGEVSE 235 (325)
T ss_dssp HHTTTCS-EEEEECSSSS--CCSCHHHHHHHHTCTTEEEECSEEEEEEE-ESSSEEEEEEEETT----------TCCEEE
T ss_pred HHHhcCC-EEEEEeCCCc--CCcchHHHHHHHhcCCceEecCCceEEEc-cCCcEEEEEEEECC----------CCcEEE
Confidence 9999986 5999999863 3344555556655 599999999999998 45677777776421 345568
Q ss_pred EECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHHHHHH
Q psy16199 244 LKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 244 i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I~~~L 322 (842)
+++|.||+|+|++ |+.++++.+ ++++++|+|.|| ++++|+.|+|||+|||+.. +.++..|+.||+.||.+|.++|
T Consensus 236 i~~D~vi~a~G~~-p~~~~l~~~--~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 311 (325)
T 2q7v_A 236 LATDGVFIFIGHV-PNTAFVKDT--VSLRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQL 311 (325)
T ss_dssp EECSEEEECSCEE-ESCGGGTTT--SCBCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEccCCC-CChHHHhhh--cccCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 676777664 777888999999 5799999999999999876 5789999999999999999999
Q ss_pred Hhc
Q psy16199 323 QEK 325 (842)
Q Consensus 323 ~~~ 325 (842)
.++
T Consensus 312 ~~~ 314 (325)
T 2q7v_A 312 AAL 314 (325)
T ss_dssp HHC
T ss_pred HHh
Confidence 874
No 21
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.94 E-value=5.9e-27 Score=268.07 Aligned_cols=281 Identities=16% Similarity=0.166 Sum_probs=209.4
Q ss_pred ecceeEeecC-CCCccccccC-CCCCCCHHHHHHHHHHHHhcCcEEEeceeeccccceeccccccCCCEEEEccCCCCCC
Q psy16199 25 SKDLPDIERP-VAALPDSSEI-PQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNAN 102 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~~i-P~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~~~v~~~~~~~~~yd~lVlAtGs~~~~ 102 (842)
|++|+|||+. .+||++++++ |.+....++..+..+++++.+++|+.+..++ ++++++++ ...||+||||||+..++
T Consensus 33 g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v~v~-~~v~~~~~-~~~~d~lViAtG~~~~~ 110 (456)
T 1lqt_A 33 DMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVG-EHVQPGEL-SERYDAVIYAVGAQSDR 110 (456)
T ss_dssp CEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESCCBT-TTBCHHHH-HHHSSEEEECCCCCEEC
T ss_pred CCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeEEEC-CEEEECCC-eEeCCEEEEeeCCCCCC
Confidence 8999999997 8999998887 6666667888888888999999999998776 67777665 35699999999997567
Q ss_pred CCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCC-CCcEEEEcCChhHHHHHHHHHHc------------
Q psy16199 103 VIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTAFDCATSALRC------------ 169 (842)
Q Consensus 103 ~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~-~~kVvVIGgG~~g~e~A~~l~~~------------ 169 (842)
.+++| |. +.++++++.+++.+++... .|. |+. ..+ .++|+|||+|++|+|+|..|.+.
T Consensus 111 ~~~ip-G~-~~~gv~~~~~~~~~~~~~~---d~~-~~~---~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~ 181 (456)
T 1lqt_A 111 MLNIP-GE-DLPGSIAAVDFVGWYNAHP---HFE-QVS---PDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADH 181 (456)
T ss_dssp CCCCT-TT-TSTTEEEHHHHHHHHTTCG---GGT-TCC---CCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHH
T ss_pred CCCCC-CC-CCCCcEEHHHHHhhhhcCc---ccc-cch---hhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHH
Confidence 78888 64 5788999888877654321 111 222 222 34499999999999999999874
Q ss_pred --------CCcEEEEEEeecCccccCCH----------------------------------------HHH-HHHHh---
Q psy16199 170 --------GANKVLVVFRKGCTNIRAVP----------------------------------------EEV-QLAWE--- 197 (842)
Q Consensus 170 --------G~~~Vtlv~r~~~~~~~~~~----------------------------------------~~~-~~~~~--- 197 (842)
|.++|+++.|++.......+ +.+ +.+.+
T Consensus 182 ~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 261 (456)
T 1lqt_A 182 ALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPR 261 (456)
T ss_dssp HHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-C
T ss_pred HHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCC
Confidence 66679999998742211111 011 11234
Q ss_pred ---cCcEEecCCCceEEEccCCcEEEEEEEeecccCCC--Ce-eccCCceEEEECCEEEEccccCcCChhHHhhcCCccc
Q psy16199 198 ---EKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKG--EW-VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271 (842)
Q Consensus 198 ---~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G--~~-~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~ 271 (842)
+||++++++.++++. .++++.+|++.+.+.+.+| +. ...+|+..+++||+||+++|++ |+. + .|+.+
T Consensus 262 ~~~~gv~i~~~~~~~~i~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~-p~~-l----~gl~~ 334 (456)
T 1lqt_A 262 PGHRRMVFRFLTSPIEIK-GKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR-GVP-T----PGLPF 334 (456)
T ss_dssp TTSEEEEEECSEEEEEEE-CSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE-CCC-C----TTSCC
T ss_pred CCCceEEEEeCCCCeEEe-cCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc-cCC-C----CCCcc
Confidence 689999999999998 4567777777654332222 11 1234555689999999999999 454 3 26888
Q ss_pred CCCCCeeeCCCCCC-CCCCCeEEeccCCCCch-hHHHHHHHHHHHHHHHHHHHHh
Q psy16199 272 DKYGYPEVNYTTMA-TSVPGVFCGGDTANLSD-TTVESVNDGKTAAWHIHKYIQE 324 (842)
Q Consensus 272 ~~~G~i~vd~~~~~-Ts~~gVfa~GD~~~~~~-~~~~A~~~G~~aA~~I~~~L~~ 324 (842)
+++|++.+| +.++ |+.|+|||+|||+.++. .+..|+.+|+.+|.+|..++.+
T Consensus 335 d~~g~i~vn-~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 335 DDQSGTIPN-VGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp BTTTTBCCE-ETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeeEC-CCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999 4566 89999999999987665 4567999999999999998865
No 22
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.94 E-value=5.2e-26 Score=246.73 Aligned_cols=264 Identities=14% Similarity=0.143 Sum_probs=194.4
Q ss_pred eecceeEeecCCCCcccc--ccCCCCC-----CCHHHHHHHHHHHHhcCcEEEeceeecc----------ccceeccccc
Q psy16199 24 LSKDLPDIERPVAALPDS--SEIPQYR-----LPFDAVNFEVELVKDLGVKIECERSLST----------RDITIEKLRK 86 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~--~~iP~~~-----~~~~~v~~~~~~l~~~gV~i~~~~~v~~----------~~v~~~~~~~ 86 (842)
.|++|+|+|+ .+||.+. .+++.+. ...++.++..+++++.+++++.++.+.. ..++++++..
T Consensus 23 ~g~~v~li~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~ 101 (310)
T 1fl2_A 23 KGIRTGLMGE-RFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAV 101 (310)
T ss_dssp TTCCEEEECS-STTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCE
T ss_pred CCCcEEEEeC-CCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCE
Confidence 4899999986 5788764 2333221 2236777777888889999999964421 1233444445
Q ss_pred cCCCEEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHH
Q psy16199 87 DGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCAT 164 (842)
Q Consensus 87 ~~yd~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~ 164 (842)
+.||+||+|||+. ++.+++| |..+. .++++. ...... ....++|+|||+|++|+|+|.
T Consensus 102 ~~~~~lv~AtG~~-~~~~~~~-g~~~~~~~~~~~~----~~~~~~--------------~~~~~~v~VvG~G~~g~e~A~ 161 (310)
T 1fl2_A 102 LKARSIIVATGAK-WRNMNVP-GEDQYRTKGVTYC----PHCDGP--------------LFKGKRVAVIGGGNSGVEAAI 161 (310)
T ss_dssp EEEEEEEECCCEE-ECCCCCT-TTTTTBTTTEESC----HHHHGG--------------GGBTCEEEEECCSHHHHHHHH
T ss_pred EEeCEEEECcCCC-cCCCCCC-ChhhcccceeEEe----ccCcHh--------------hcCCCEEEEECCCHHHHHHHH
Confidence 6799999999998 7777777 54332 223321 111110 122455999999999999999
Q ss_pred HHHHcCCcEEEEEEeecCccccCCHHHHHHHHh-cCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEE
Q psy16199 165 SALRCGANKVLVVFRKGCTNIRAVPEEVQLAWE-EKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIK 243 (842)
Q Consensus 165 ~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~-~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~ 243 (842)
.|.+.|. +|+++++.+. +...+...+.+.+ .||++++++.++++..+++++.+|++.+.. +|+..+
T Consensus 162 ~l~~~g~-~Vtlv~~~~~--~~~~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~----------~g~~~~ 228 (310)
T 1fl2_A 162 DLAGIVE-HVTLLEFAPE--MKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRV----------SGDIHN 228 (310)
T ss_dssp HHHTTBS-EEEEECSSSS--CCSCHHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETT----------TCCEEE
T ss_pred HHHHhCC-EEEEEEeCcc--cCccHHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECC----------CCcEEE
Confidence 9999875 5999999874 3334444455666 699999999999998555678778877531 345568
Q ss_pred EECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCc-hhHHHHHHHHHHHHHHHHHHH
Q psy16199 244 LKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLS-DTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 244 i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~-~~~~~A~~~G~~aA~~I~~~L 322 (842)
+++|.||+++|++ |+.++++.. ++++++|+|.|| ++++|+.|+|||+|||+..+ .++..|+.+|+.||.+|.++|
T Consensus 229 i~~D~vi~a~G~~-p~~~~l~~~--l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 229 IELAGIFVQIGLL-PNTNWLEGA--VERNRMGEIIID-AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp EECSEEEECSCEE-ESCGGGTTT--SCBCTTSCBCCC-TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEeeCCc-cCchHHhcc--ccccCCCcEEcC-CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHH
Confidence 9999999999999 666676652 778888999999 57899999999999998764 678999999999999999999
Q ss_pred Hhc
Q psy16199 323 QEK 325 (842)
Q Consensus 323 ~~~ 325 (842)
+++
T Consensus 305 ~~~ 307 (310)
T 1fl2_A 305 IRT 307 (310)
T ss_dssp HHS
T ss_pred HHh
Confidence 874
No 23
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.94 E-value=4.8e-26 Score=248.30 Aligned_cols=264 Identities=16% Similarity=0.144 Sum_probs=195.3
Q ss_pred eecceeEeecCCCCcccccc-----CCCC--CCCHHHHHHHHHHHHhcCcEEEeceeecc----c--cceeccccccCCC
Q psy16199 24 LSKDLPDIERPVAALPDSSE-----IPQY--RLPFDAVNFEVELVKDLGVKIECERSLST----R--DITIEKLRKDGYT 90 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~~~-----iP~~--~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~--~v~~~~~~~~~yd 90 (842)
.|++|+|+|+..+||.+... .|.+ ....++.++..+++++.|+++++++.... . .+..+ ...+.||
T Consensus 38 ~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~-~~~~~~~ 116 (319)
T 3cty_A 38 SGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIETN-DDTYHAK 116 (319)
T ss_dssp TTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEES-SSEEEEE
T ss_pred CCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEEC-CCEEEeC
Confidence 48999999998888876431 2332 12346777777888889999988543321 1 12222 2345699
Q ss_pred EEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHH
Q psy16199 91 AIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALR 168 (842)
Q Consensus 91 ~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~ 168 (842)
+||+|||+. ++.+++| |.... .+++. ....... ....++|+|||+|++|+|+|..|.+
T Consensus 117 ~li~AtG~~-~~~~~i~-g~~~~~~~~~~~----~~~~~~~--------------~~~~~~v~viG~G~~g~e~a~~l~~ 176 (319)
T 3cty_A 117 YVIITTGTT-HKHLGVK-GESEYFGKGTSY----CSTCDGY--------------LFKGKRVVTIGGGNSGAIAAISMSE 176 (319)
T ss_dssp EEEECCCEE-ECCCCCB-TTTTTBTTTEES----CHHHHGG--------------GGBTSEEEEECCSHHHHHHHHHHTT
T ss_pred EEEECCCCC-cccCCCC-ChHHhCCceEEE----EEecchh--------------hcCCCeEEEECCCHHHHHHHHHHHh
Confidence 999999997 7777777 54322 23322 1111110 1223559999999999999999999
Q ss_pred cCCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCE
Q psy16199 169 CGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANY 248 (842)
Q Consensus 169 ~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~ 248 (842)
.|. +|+++++.+. +...+...+.+.+.||++++++.++++..+++++.+|++.+.. +|+..++++|.
T Consensus 177 ~g~-~V~~i~~~~~--~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~----------~g~~~~i~~D~ 243 (319)
T 3cty_A 177 YVK-NVTIIEYMPK--YMCENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRT----------TGEEKLIETDG 243 (319)
T ss_dssp TBS-EEEEECSSSS--CCSCHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETT----------TCCEEEECCSE
T ss_pred hCC-cEEEEEcCCc--cCCCHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcC----------CCceEEEecCE
Confidence 875 5999998863 3445556667778999999999999998555557777776421 34556799999
Q ss_pred EEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHh
Q psy16199 249 IISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHIHKYIQE 324 (842)
Q Consensus 249 Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I~~~L~~ 324 (842)
||+|+|++ |+.++++.+ |++++++|+|.|| ++++|+.|+|||+|||+.. +.++..|+.||+.||.+|.++|++
T Consensus 244 vi~a~G~~-p~~~~l~~~-gl~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 244 VFIYVGLI-PQTSFLKDS-GVKLDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp EEECCCEE-ECCGGGTTS-CCCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeeCCc-cChHHHhhc-cccccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999 677788776 8999999999999 5699999999999999876 478999999999999999999865
No 24
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.93 E-value=6.2e-26 Score=248.04 Aligned_cols=262 Identities=16% Similarity=0.198 Sum_probs=199.0
Q ss_pred eecceeEeecC-CCCcccccc--------CCCCC--CCHHHHHHHHHHHHhcCcEEEeceeecc-----c---cceeccc
Q psy16199 24 LSKDLPDIERP-VAALPDSSE--------IPQYR--LPFDAVNFEVELVKDLGVKIECERSLST-----R---DITIEKL 84 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~~--------iP~~~--~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~---~v~~~~~ 84 (842)
.|++|+|+|+. .+||.+... +|.+. .+.++..+..++++++++++++++.|.. . .++.+++
T Consensus 29 ~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g 108 (332)
T 3lzw_A 29 RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE 108 (332)
T ss_dssp TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE
T ss_pred CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC
Confidence 58999999996 899987532 33332 2457888888889999999999876642 1 2333333
Q ss_pred cccCCCEEEEccCCC--CCCCCCCCCCCcccc--CceehhcchHHHhhcccCCccCCCCCCCCCCC-CCcEEEEcCChhH
Q psy16199 85 RKDGYTAIFIGIGKP--NANVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTA 159 (842)
Q Consensus 85 ~~~~yd~lVlAtGs~--~~~~~~i~~G~~~~~--gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~-~~kVvVIGgG~~g 159 (842)
. +.||+||+|||+. .|+.+++| |..... +++. .+ ++. ... .++|+|||+|.+|
T Consensus 109 ~-~~~d~vVlAtG~~~~~p~~~~~~-g~~~~~g~~~~~--~~---------------~~~---~~~~~~~v~vvG~g~~~ 166 (332)
T 3lzw_A 109 T-HYSKTVIITAGNGAFKPRKLELE-NAEQYEGKNLHY--FV---------------DDL---QKFAGRRVAILGGGDSA 166 (332)
T ss_dssp E-EEEEEEEECCTTSCCEECCCCCT-TGGGGBTTTEES--SC---------------SCG---GGGBTCEEEEECSSHHH
T ss_pred E-EEeCEEEECCCCCcCCCCCCCCC-ChhhccCceEEE--ec---------------CCH---HHcCCCEEEEECCCHhH
Confidence 3 5699999999993 27777777 543322 2221 11 111 222 3459999999999
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCC
Q psy16199 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEE 239 (842)
Q Consensus 160 ~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g 239 (842)
+|+|..|.+.|. +|+++++.+ .+...+..++.+.+.||++++++.++++.. ++.+..|++.+.. ++
T Consensus 167 ~e~a~~l~~~~~-~v~~~~~~~--~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~-~~~~~~v~~~~~~----------~g 232 (332)
T 3lzw_A 167 VDWALMLEPIAK-EVSIIHRRD--KFRAHEHSVENLHASKVNVLTPFVPAELIG-EDKIEQLVLEEVK----------GD 232 (332)
T ss_dssp HHHHHHHTTTBS-EEEEECSSS--SCSSCHHHHHHHHHSSCEEETTEEEEEEEC-SSSCCEEEEEETT----------SC
T ss_pred HHHHHHHHhhCC-eEEEEEecC--cCCccHHHHHHHhcCCeEEEeCceeeEEec-CCceEEEEEEecC----------CC
Confidence 999999999876 599999986 345566777778899999999999999984 3335567776532 34
Q ss_pred ceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCC---CCchhHHHHHHHHHHHHH
Q psy16199 240 QRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA---NLSDTTVESVNDGKTAAW 316 (842)
Q Consensus 240 ~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~---~~~~~~~~A~~~G~~aA~ 316 (842)
+..++++|.||+++|++ |+..+++.+ |+++ ++|++.|| ++++|+.|+|||+|||+ ..+.++..|+.||+.||.
T Consensus 233 ~~~~~~~D~vv~a~G~~-p~~~~~~~~-~~~~-~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~ 308 (332)
T 3lzw_A 233 RKEILEIDDLIVNYGFV-SSLGPIKNW-GLDI-EKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVN 308 (332)
T ss_dssp CEEEEECSEEEECCCEE-CCCGGGGGS-SCCE-ETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHH
T ss_pred ceEEEECCEEEEeeccC-CCchHHhhc-Cccc-cCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHH
Confidence 55689999999999999 677788776 7888 67999999 58999999999999997 457889999999999999
Q ss_pred HHHHHHHhc
Q psy16199 317 HIHKYIQEK 325 (842)
Q Consensus 317 ~I~~~L~~~ 325 (842)
+|.++|++.
T Consensus 309 ~i~~~l~~~ 317 (332)
T 3lzw_A 309 NAKAYMDPK 317 (332)
T ss_dssp HHHHHHCTT
T ss_pred HHHHhhChh
Confidence 999999753
No 25
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.93 E-value=4.7e-26 Score=246.93 Aligned_cols=257 Identities=10% Similarity=0.100 Sum_probs=184.2
Q ss_pred eecceeEeecCCCCccccccCCCC-----CCCHHHHHHHHHHHHhcC-cEEEeceeecc-------ccceeccccccCCC
Q psy16199 24 LSKDLPDIERPVAALPDSSEIPQY-----RLPFDAVNFEVELVKDLG-VKIECERSLST-------RDITIEKLRKDGYT 90 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~~~iP~~-----~~~~~~v~~~~~~l~~~g-V~i~~~~~v~~-------~~v~~~~~~~~~yd 90 (842)
.|++|+|||+..+||.+...+|.+ ..+.++.+...+++.+++ +.+..++.+.. ..+...++..+.||
T Consensus 28 ~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~ 107 (304)
T 4fk1_A 28 ARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAE 107 (304)
T ss_dssp TTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEE
T ss_pred CCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeC
Confidence 589999999998899875444433 234577777777777775 56665554321 12344455566799
Q ss_pred EEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCC-CCcEEEEcCChh-HHHHHHHH
Q psy16199 91 AIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDT-AFDCATSA 166 (842)
Q Consensus 91 ~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~-~~kVvVIGgG~~-g~e~A~~l 166 (842)
+||||||++ |+.|++| |.... .++++. ..|+. ... .++++|||||.. ++|+|..+
T Consensus 108 ~liiATGs~-p~~p~i~-G~~~~~~~~v~~~----------------~~~~~---~~~~~~~~~VIggG~~~~~e~a~~~ 166 (304)
T 4fk1_A 108 RVLLATGMQ-EEFPSIP-NVREYYGKSLFSC----------------PYCDG---WELKDQPLIIISENEDHTLHMTKLV 166 (304)
T ss_dssp EEEECCCCE-EECCSCT-THHHHBTTTEESC----------------HHHHS---GGGTTSCEEEECCSHHHHHHHHHHH
T ss_pred EEEEccCCc-ccccccc-Cccccccceeeec----------------cccch---hHhcCCceeeecCCCchhhhHHHHH
Confidence 999999998 8888888 54332 123321 11221 222 334777787765 67888887
Q ss_pred HHcCCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEEC
Q psy16199 167 LRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKA 246 (842)
Q Consensus 167 ~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~ 246 (842)
.+.+. +|+++.++.. ..+...+.+.++|+.++.+ .++.+..++++++.|++.+ | .++++
T Consensus 167 ~~~~~-~v~i~~~~~~----~~~~~~~~l~~~g~~~~~~-~v~~~~~~~~~~~~v~~~~-------------g--~~i~~ 225 (304)
T 4fk1_A 167 YNWST-DLVIATNGNE----LSQTIMDELSNKNIPVITE-SIRTLQGEGGYLKKVEFHS-------------G--LRIER 225 (304)
T ss_dssp TTTCS-CEEEECSSCC----CCHHHHHHHHTTTCCEECS-CEEEEESGGGCCCEEEETT-------------S--CEECC
T ss_pred HhCCc-eEEEEecccc----chhhhhhhhhccceeEeee-eEEEeecCCCeeeeeeccc-------------c--ceeee
Confidence 77765 5988877642 2355566778889999876 4677775566676666643 2 36889
Q ss_pred CEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC-CchhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 247 NYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN-LSDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 247 D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~-~~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|.+++++|.+||+ .+++.+ |++++++|+|.|| ++++||+|||||+|||+. ++.++..|+.||+.||.+|+++|..+
T Consensus 226 ~~~vi~~g~~~~~-~~~~~~-g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 226 AGGFIVPTFFRPN-QFIEQL-GCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp CEEEECCEEECSS-CHHHHT-TCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeccccCC-hhhhhc-CeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999998888555 566776 8999999999999 689999999999999985 45678999999999999999999753
No 26
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.93 E-value=1.6e-25 Score=253.65 Aligned_cols=284 Identities=15% Similarity=0.157 Sum_probs=202.8
Q ss_pred ecc--eeEeecC-CCCcc---cccc-CCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceeccccccCCCEE
Q psy16199 25 SKD--LPDIERP-VAALP---DSSE-IPQYRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIEKLRKDGYTAI 92 (842)
Q Consensus 25 g~~--V~l~Ek~-~~GG~---~~~~-iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~l 92 (842)
|++ |+|+|++ .++.. +... +.....+.++.....+++++.++++++++.+.. +.+.++++..+.||+|
T Consensus 32 g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~l 111 (415)
T 3lxd_A 32 GFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKL 111 (415)
T ss_dssp TCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEE
T ss_pred CcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEE
Confidence 555 9999997 44432 1111 111122334444455777889999999965532 3455666666779999
Q ss_pred EEccCCCCCCCCCCCCCCccccCceehhcchH--HHhhcccCCccCCCCCCCCCCC-CCcEEEEcCChhHHHHHHHHHHc
Q psy16199 93 FIGIGKPNANVIPIFQGLTEEMGFYTSKTFLP--RVATSSKKGLCGGCKKESLPIL-KGTVIVLGAGDTAFDCATSALRC 169 (842)
Q Consensus 93 VlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~--~~~~~~~~~~c~~c~~~~~~~~-~~kVvVIGgG~~g~e~A~~l~~~ 169 (842)
|||||+. |+.+++| |. +.+++++..+... .+... ... .++|+|||+|++|+|+|..+.+.
T Consensus 112 vlAtG~~-~~~~~i~-g~-~~~~v~~~~~~~d~~~l~~~--------------~~~~~~~vvViGgG~~g~e~A~~l~~~ 174 (415)
T 3lxd_A 112 IWATGGD-PRRLSCV-GA-DLAGVHAVRTKEDADRLMAE--------------LDAGAKNAVVIGGGYIGLEAAAVLTKF 174 (415)
T ss_dssp EECCCEE-CCCCBTT-SS-CCBTEECCCSHHHHHHHHHH--------------HHTTCCEEEEECCSHHHHHHHHHHHHT
T ss_pred EEccCCc-cCCCCCC-Cc-cccCEEEEcCHHHHHHHHHH--------------hhhcCCeEEEECCCHHHHHHHHHHHhc
Confidence 9999998 8888888 53 5566664322211 11111 112 45699999999999999999999
Q ss_pred CCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEE
Q psy16199 170 GANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 170 G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
|.+ ||++++.+.......+.++ +.+.+.||++++++.++++..+++++..|++.++ .++
T Consensus 175 g~~-Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG---------------~~i 238 (415)
T 3lxd_A 175 GVN-VTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDG---------------SVI 238 (415)
T ss_dssp TCE-EEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSS---------------CEE
T ss_pred CCe-EEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCC---------------CEE
Confidence 964 9999998753322333332 3355789999999999999866678877777542 268
Q ss_pred ECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCch-----------hHHHHHHHHHH
Q psy16199 245 KANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSD-----------TTVESVNDGKT 313 (842)
Q Consensus 245 ~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~-----------~~~~A~~~G~~ 313 (842)
+||.||+|+|++ |+.++++.+ |++.+ +| |.|| ++++|+.|+|||+|||+..+. ++..|..||+.
T Consensus 239 ~aD~Vv~a~G~~-p~~~l~~~~-gl~~~-~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~ 313 (415)
T 3lxd_A 239 PADIVIVGIGIV-PCVGALISA-GASGG-NG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATA 313 (415)
T ss_dssp ECSEEEECSCCE-ESCHHHHHT-TCCCS-SS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHH
T ss_pred EcCEEEECCCCc-cChHHHHhC-CCCcC-CC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHH
Confidence 999999999999 677788877 88887 45 9999 689999999999999976432 46899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCceeeccccccceeeecccc
Q psy16199 314 AAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLK 356 (842)
Q Consensus 314 aA~~I~~~L~~~~~~~~~~~~~~p~~~t~i~~~~L~~~~~G~~ 356 (842)
||.+|.. . .. .....|+||+ +++++++++.|..
T Consensus 314 aa~~i~g----~-~~---~~~~~p~~~~--~~~~~~~~~~G~~ 346 (415)
T 3lxd_A 314 AAKDICG----A-PV---PYKATPWFWS--NQYDLKLQTVGLS 346 (415)
T ss_dssp HHHHHTT----C-CC---CCCCCCEEEE--EETTEEEEEEECC
T ss_pred HHHHhcC----C-CC---CCCCCCeeEe--eeCCcEEEEEeCC
Confidence 9999852 1 11 2346789998 5678888888865
No 27
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.93 E-value=3.2e-25 Score=243.08 Aligned_cols=271 Identities=21% Similarity=0.250 Sum_probs=194.2
Q ss_pred eecceeEeec-----CCCCccccc-----cCCCCC---CCHHHHHHHHHHHHhcCcEEEeceeecc----c--cceeccc
Q psy16199 24 LSKDLPDIER-----PVAALPDSS-----EIPQYR---LPFDAVNFEVELVKDLGVKIECERSLST----R--DITIEKL 84 (842)
Q Consensus 24 ~g~~V~l~Ek-----~~~GG~~~~-----~iP~~~---~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~--~v~~~~~ 84 (842)
.|++|+|+|+ ..+||.+.. ..|.+. .+.++.++..+++++.|+++++++.+.. . .++. +.
T Consensus 30 ~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~ 108 (333)
T 1vdc_A 30 AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DS 108 (333)
T ss_dssp TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SS
T ss_pred CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CC
Confidence 4899999999 478887643 233331 2346777777888899999998873321 1 1333 23
Q ss_pred cccCCCEEEEccCCCCCCCCCCCCCCccccCceehh--cchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHH
Q psy16199 85 RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSK--TFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDC 162 (842)
Q Consensus 85 ~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~--~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~ 162 (842)
..+.||+||+|||++ ++.+++| |.....+++... ......... ......++|+|||+|++|+|+
T Consensus 109 ~~~~~~~vv~A~G~~-~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~v~VvG~G~~g~e~ 174 (333)
T 1vdc_A 109 KAILADAVILAIGAV-AKRLSFV-GSGEVLGGFWNRGISACAVCDGA------------APIFRNKPLAVIGGGDSAMEE 174 (333)
T ss_dssp EEEEEEEEEECCCEE-ECCCCCB-TCSSSSSCCBTTTEESCHHHHTT------------SGGGTTSEEEEECCSHHHHHH
T ss_pred cEEEcCEEEECCCCC-cCCCCCC-CccccccccccCcEEEeccCccc------------hhhcCCCeEEEECCChHHHHH
Confidence 455799999999998 7777787 543322222110 011111110 000234559999999999999
Q ss_pred HHHHHHcCCcEEEEEEeecCccccCCHHHHHHH-HhcCcEEecCCCceEEEccCC--cEEEEEEEeecccCCCCeeccCC
Q psy16199 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLA-WEEKCEFLPFMSPVQVDVKDN--KIAGMQFNRTEQNEKGEWVEDEE 239 (842)
Q Consensus 163 A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~-~~~gV~i~~~~~v~~v~~~~~--~v~~V~~~~~~~~~~G~~~~~~g 239 (842)
|..|.+.|. +|+++++++. +...+...+++ .+.||++++++.++++..+++ ++.+|++.+.. +|
T Consensus 175 A~~l~~~g~-~V~lv~~~~~--~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~----------~g 241 (333)
T 1vdc_A 175 ANFLTKYGS-KVYIIHRRDA--FRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVV----------TG 241 (333)
T ss_dssp HHHHTTTSS-EEEEECSSSS--CCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETT----------TC
T ss_pred HHHHHhcCC-eEEEEecCCc--CCccHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecC----------CC
Confidence 999999886 5999999863 33344444344 468999999999999975443 77777776421 34
Q ss_pred ceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHH
Q psy16199 240 QRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHI 318 (842)
Q Consensus 240 ~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I 318 (842)
+..++++|.||+++|++ |+..+++. +++++++|++.||+.+++|+.|+|||+|||+.. +.++..|+.+|+.||.+|
T Consensus 242 ~~~~i~~D~vi~a~G~~-p~~~~~~~--~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 242 DVSDLKVSGLFFAIGHE-PATKFLDG--GVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp CEEEEECSEEEECSCEE-ESCGGGTT--SSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEecCEEEEEeCCc-cchHHhhc--cccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 45689999999999999 66667652 688888999999966689999999999999875 478999999999999999
Q ss_pred HHHHHhc
Q psy16199 319 HKYIQEK 325 (842)
Q Consensus 319 ~~~L~~~ 325 (842)
.++|+++
T Consensus 319 ~~~l~~~ 325 (333)
T 1vdc_A 319 EHYLQEI 325 (333)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999875
No 28
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.5e-25 Score=246.39 Aligned_cols=265 Identities=22% Similarity=0.252 Sum_probs=192.4
Q ss_pred eecceeEeecCCCCcccccc-----CCCCC---CCHHHHHHHHHHHHhcCcEEEeceeecc---c--cc-eeccccccCC
Q psy16199 24 LSKDLPDIERPVAALPDSSE-----IPQYR---LPFDAVNFEVELVKDLGVKIECERSLST---R--DI-TIEKLRKDGY 89 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~~~-----iP~~~---~~~~~v~~~~~~l~~~gV~i~~~~~v~~---~--~v-~~~~~~~~~y 89 (842)
.|++|+|+|+..+||.+.+. .|.+. ...++.++..+++++.|+++++++.... . .+ .++++..+.|
T Consensus 36 ~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~ 115 (335)
T 2a87_A 36 AQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRA 115 (335)
T ss_dssp TTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEE
T ss_pred CCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEe
Confidence 38999999998889976432 33332 2347777777888899999999874321 1 12 3334445679
Q ss_pred CEEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHH
Q psy16199 90 TAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSAL 167 (842)
Q Consensus 90 d~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~ 167 (842)
|+||+|||+. ++.+++| |.... .++++. ...+. . ....++|+|||+|++|+|+|..|.
T Consensus 116 d~lviAtG~~-~~~~~i~-g~~~~~~~~~~~~-~~~~~---~--------------~~~~~~v~ViG~G~~g~e~a~~l~ 175 (335)
T 2a87_A 116 RAVILAMGAA-ARYLQVP-GEQELLGRGVSSC-ATCDG---F--------------FFRDQDIAVIGGGDSAMEEATFLT 175 (335)
T ss_dssp EEEEECCCEE-ECCCCCT-HHHHTBTTTEESC-HHHHG---G--------------GGTTCEEEEECSSHHHHHHHHHHT
T ss_pred CEEEECCCCC-ccCCCCC-chHhccCCceEEe-eccch---h--------------hcCCCEEEEECCCHHHHHHHHHHH
Confidence 9999999997 7777777 43222 223221 11111 0 122355999999999999999999
Q ss_pred HcCCcEEEEEEeecCccccCCHHHHHHH-HhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEEC
Q psy16199 168 RCGANKVLVVFRKGCTNIRAVPEEVQLA-WEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKA 246 (842)
Q Consensus 168 ~~G~~~Vtlv~r~~~~~~~~~~~~~~~~-~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~ 246 (842)
+.|. +|++++|++.. ...+...+++ .+.||++++++.++++.. ++++.+|.+.+.. +|+..++++
T Consensus 176 ~~g~-~V~l~~~~~~~--~~~~~~~~~~~~~~gV~v~~~~~v~~i~~-~~~~~~v~~~~~~----------~g~~~~i~~ 241 (335)
T 2a87_A 176 RFAR-SVTLVHRRDEF--RASKIMLDRARNNDKIRFLTNHTVVAVDG-DTTVTGLRVRDTN----------TGAETTLPV 241 (335)
T ss_dssp TTCS-EEEEECSSSSC--SSCTTHHHHHHHCTTEEEECSEEEEEEEC-SSSCCEEEEEEET----------TSCCEEECC
T ss_pred HhCC-eEEEEEcCCcC--CccHHHHHHHhccCCcEEEeCceeEEEec-CCcEeEEEEEEcC----------CCceEEeec
Confidence 9886 59999988642 2223333333 468999999999999973 4455556666431 244468999
Q ss_pred CEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 247 NYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 247 D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|.||+++|++ |+..+++ . +++++++|++.||+.+++|+.|+|||+|||+.. +.++..|+.+|+.||.+|.++|+++
T Consensus 242 D~vi~a~G~~-p~~~~~~-~-~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 242 TGVFVAIGHE-PRSGLVR-E-AIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp SCEEECSCEE-ECCTTTB-T-TBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEccCCc-cChhHhh-c-ccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 9999999999 6666665 2 688888999999976789999999999999875 4788999999999999999999864
No 29
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.93 E-value=2.2e-25 Score=244.55 Aligned_cols=264 Identities=20% Similarity=0.208 Sum_probs=190.5
Q ss_pred eecceeEeecC-CCCcccccc--------CCCCC--CCHHHHHHHHHHHHhcCcEEEeceeecc-------ccceecccc
Q psy16199 24 LSKDLPDIERP-VAALPDSSE--------IPQYR--LPFDAVNFEVELVKDLGVKIECERSLST-------RDITIEKLR 85 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~~--------iP~~~--~~~~~v~~~~~~l~~~gV~i~~~~~v~~-------~~v~~~~~~ 85 (842)
.|++|+|+|+. .+||.+... .|.+. .+.++.++..++++++++++++++.|.. ..+..+++.
T Consensus 27 ~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~ 106 (335)
T 2zbw_A 27 RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGN 106 (335)
T ss_dssp TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSC
T ss_pred CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCC
Confidence 58999999996 789976422 22221 2357777888888889999988876542 113333344
Q ss_pred ccCCCEEEEccCCC--CCCCCCCCCCCccccC--ceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHH
Q psy16199 86 KDGYTAIFIGIGKP--NANVIPIFQGLTEEMG--FYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFD 161 (842)
Q Consensus 86 ~~~yd~lVlAtGs~--~~~~~~i~~G~~~~~g--v~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e 161 (842)
.+.||+||+|||+. .|+.++++ |.....+ +++. +. +. .....++|+|||+|++|+|
T Consensus 107 ~~~~~~lv~AtG~~~~~p~~~~i~-g~~~~~~~~~~~~---~~--------------~~--~~~~~~~v~viG~G~~g~e 166 (335)
T 2zbw_A 107 AYTAKAVIIAAGVGAFEPRRIGAP-GEREFEGRGVYYA---VK--------------SK--AEFQGKRVLIVGGGDSAVD 166 (335)
T ss_dssp EEEEEEEEECCTTSEEEECCCCCT-TTTTTBTTTEESS---CS--------------CG--GGGTTCEEEEECSSHHHHH
T ss_pred EEEeCEEEECCCCCCCCCCCCCCC-ChhhccCcEEEEe---cC--------------ch--hhcCCCEEEEECCCHHHHH
Confidence 56699999999995 36666776 5432221 2211 10 00 0112345999999999999
Q ss_pred HHHHHHHcCCcEEEEEEeecCccccCCHHHHHH----HHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeecc
Q psy16199 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQL----AWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVED 237 (842)
Q Consensus 162 ~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~----~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~ 237 (842)
+|..|.+.|. +|++++|++. +...+...+. +.+.||++++++.++++.. ++++..|++....
T Consensus 167 ~a~~l~~~g~-~V~~v~~~~~--~~~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~-~~~~~~v~~~~~~---------- 232 (335)
T 2zbw_A 167 WALNLLDTAR-RITLIHRRPQ--FRAHEASVKELMKAHEEGRLEVLTPYELRRVEG-DERVRWAVVFHNQ---------- 232 (335)
T ss_dssp HHHHTTTTSS-EEEEECSSSS--CCSCHHHHHHHHHHHHTTSSEEETTEEEEEEEE-SSSEEEEEEEETT----------
T ss_pred HHHHHHhhCC-EEEEEEcCCc--cCccHHHHHHHHhccccCCeEEecCCcceeEcc-CCCeeEEEEEECC----------
Confidence 9999999886 5999999863 3333433333 3345999999999999984 5677677776321
Q ss_pred CCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC---CchhHHHHHHHHHHH
Q psy16199 238 EEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN---LSDTTVESVNDGKTA 314 (842)
Q Consensus 238 ~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~---~~~~~~~A~~~G~~a 314 (842)
+|+..++++|.||+++|++ |+.++++.+ |++++ +|++.|| ++++|+.|+|||+|||+. .+.++..|+.||+.|
T Consensus 233 ~g~~~~i~~D~vi~a~G~~-p~~~~l~~~-~~~~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~a 308 (335)
T 2zbw_A 233 TQEELALEVDAVLILAGYI-TKLGPLANW-GLALE-KNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIA 308 (335)
T ss_dssp TCCEEEEECSEEEECCCEE-EECGGGGGS-CCCEE-TTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHH
T ss_pred CCceEEEecCEEEEeecCC-CCchHhhhc-ceecc-CCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHH
Confidence 2444689999999999999 566677776 78877 6899999 589999999999999974 346889999999999
Q ss_pred HHHHHHHHHhc
Q psy16199 315 AWHIHKYIQEK 325 (842)
Q Consensus 315 A~~I~~~L~~~ 325 (842)
|.+|.++|.+.
T Consensus 309 a~~i~~~l~~~ 319 (335)
T 2zbw_A 309 ANHAAAYANPA 319 (335)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhhhh
Confidence 99999999754
No 30
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.93 E-value=9.3e-26 Score=259.70 Aligned_cols=224 Identities=18% Similarity=0.213 Sum_probs=168.9
Q ss_pred HHHHHhcCcEEEeceeecc--cccee--ccc--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhccc
Q psy16199 58 VELVKDLGVKIECERSLST--RDITI--EKL--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~--~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
.+++++.||+++.++.+.. ..+++ +++ ..+.||+||||||+. |+.++++ |+ +.++++++.+++..
T Consensus 100 ~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~-p~~p~~~-g~-~~~~v~t~~~~~~~------ 170 (468)
T 2qae_A 100 EYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSE-PTELPFL-PF-DEKVVLSSTGALAL------ 170 (468)
T ss_dssp HHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEE-ECCBTTB-CC-CSSSEECHHHHHTC------
T ss_pred HHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCC-cCCCCCC-CC-CcCceechHHHhhc------
Confidence 4556678999998875421 22233 233 456799999999998 7777877 54 33567776655431
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHH-HhcCcEEecC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLA-WEEKCEFLPF 205 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~-~~~gV~i~~~ 205 (842)
...+++++|||||++|+|+|..|.+.|.+ ||++++.+. .++..++++ +.+ .+.||+++++
T Consensus 171 ------------~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~~gv~i~~~ 236 (468)
T 2qae_A 171 ------------PRVPKTMVVIGGGVIGLELGSVWARLGAE-VTVVEFAPR-CAPTLDEDVTNALVGALAKNEKMKFMTS 236 (468)
T ss_dssp ------------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHHTCCEEECS
T ss_pred ------------ccCCceEEEECCCHHHHHHHHHHHHhCCE-EEEEecCCc-ccccCCHHHHHHHHHHHhhcCCcEEEeC
Confidence 22456699999999999999999999975 999999874 455544432 345 6789999999
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCC
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTT 283 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~ 283 (842)
+.++++..+++.+ .+.+.+. +|+..++++|.||+|+|++ |+..+ ++.+ |++++++|+|.|| ++
T Consensus 237 ~~v~~i~~~~~~~-~v~~~~~-----------~g~~~~i~~D~vv~a~G~~-p~~~~l~l~~~-gl~~~~~G~i~vd-~~ 301 (468)
T 2qae_A 237 TKVVGGTNNGDSV-SLEVEGK-----------NGKRETVTCEALLVSVGRR-PFTGGLGLDKI-NVAKNERGFVKIG-DH 301 (468)
T ss_dssp CEEEEEEECSSSE-EEEEECC--------------EEEEEESEEEECSCEE-ECCTTSCHHHH-TCCBCTTSCBCCC-TT
T ss_pred CEEEEEEEcCCeE-EEEEEcC-----------CCceEEEECCEEEECCCcc-cCCCCCCchhc-CCccCCCCCEeEC-CC
Confidence 9999997444333 2444310 2333579999999999999 56665 6666 8999988999999 68
Q ss_pred CCCCCCCeEEeccCCC-CchhHHHHHHHHHHHHHHHH
Q psy16199 284 MATSVPGVFCGGDTAN-LSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 284 ~~Ts~~gVfa~GD~~~-~~~~~~~A~~~G~~aA~~I~ 319 (842)
++|+.|+|||+|||+. .+.....|..||+.||.+|.
T Consensus 302 ~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 338 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILA 338 (468)
T ss_dssp SBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHc
Confidence 9999999999999998 78889999999999999985
No 31
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.93 E-value=2.6e-25 Score=251.04 Aligned_cols=284 Identities=15% Similarity=0.153 Sum_probs=200.1
Q ss_pred eec--ceeEeecC-CCCcc---ccccC-CCCCCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceeccccccCCCE
Q psy16199 24 LSK--DLPDIERP-VAALP---DSSEI-PQYRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIEKLRKDGYTA 91 (842)
Q Consensus 24 ~g~--~V~l~Ek~-~~GG~---~~~~i-P~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~ 91 (842)
.|+ +|+|+|++ ..+.. +.... .....+.++.....+++.+.++++++ +.+.. +.++++++..+.||+
T Consensus 23 ~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~ 101 (404)
T 3fg2_P 23 AKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMVSIDREGRKLLLASGTAIEYGH 101 (404)
T ss_dssp TTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEEEEETTTTEEEESSSCEEECSE
T ss_pred hCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEEEEECCCCEEEECCCCEEECCE
Confidence 355 89999997 34332 11011 11112222323344667788999998 44421 345566666677999
Q ss_pred EEEccCCCCCCCCCCCCCCccccCceehhcchH--HHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHc
Q psy16199 92 IFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLP--RVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRC 169 (842)
Q Consensus 92 lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~--~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~ 169 (842)
||||||+. |+.+++| |. +.+++++...... .+... ....++|+|||+|++|+|+|..+.+.
T Consensus 102 lvlAtG~~-p~~~~i~-g~-~~~~v~~~~~~~d~~~l~~~--------------~~~~~~vvViGgG~~g~e~A~~l~~~ 164 (404)
T 3fg2_P 102 LVLATGAR-NRMLDVP-NA-SLPDVLYLRTLDESEVLRQR--------------MPDKKHVVVIGAGFIGLEFAATARAK 164 (404)
T ss_dssp EEECCCEE-ECCCCST-TT-TSTTEECCSSHHHHHHHHHH--------------GGGCSEEEEECCSHHHHHHHHHHHHT
T ss_pred EEEeeCCC-ccCCCCC-CC-CCCcEEEECCHHHHHHHHHH--------------hhcCCeEEEECCCHHHHHHHHHHHhC
Confidence 99999997 8888888 53 5567765322211 11111 12245699999999999999999999
Q ss_pred CCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEE
Q psy16199 170 GANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 170 G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
|. +||++++.+.......+.++ +.+.+.||++++++.++++...++++.+|++.+ |+ ++
T Consensus 165 g~-~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~d-------------G~--~i 228 (404)
T 3fg2_P 165 GL-EVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSD-------------GN--TL 228 (404)
T ss_dssp TC-EEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT-------------SC--EE
T ss_pred CC-EEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCC-------------CC--EE
Confidence 86 49999998753333333322 335578999999999999986667777777653 22 78
Q ss_pred ECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCch----------hHHHHHHHHHHH
Q psy16199 245 KANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSD----------TTVESVNDGKTA 314 (842)
Q Consensus 245 ~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~----------~~~~A~~~G~~a 314 (842)
+||.||+|+|++ |+.++++.+ |++++ +| |.|| ++++|+.|+|||+|||+..+. ++..|..||+.|
T Consensus 229 ~aD~Vv~a~G~~-p~~~l~~~~-gl~~~-~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~a 303 (404)
T 3fg2_P 229 PCDLVVVGVGVI-PNVEIAAAA-GLPTA-AG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCV 303 (404)
T ss_dssp ECSEEEECCCEE-ECCHHHHHT-TCCBS-SS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHH
T ss_pred EcCEEEECcCCc-cCHHHHHhC-CCCCC-CC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHH
Confidence 999999999999 677888877 88887 45 9999 689999999999999976432 478999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCceeeccccccceeeecccc
Q psy16199 315 AWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLK 356 (842)
Q Consensus 315 A~~I~~~L~~~~~~~~~~~~~~p~~~t~i~~~~L~~~~~G~~ 356 (842)
|.+|.. . .. .....|+||+ +++++++++.|..
T Consensus 304 a~~i~g----~-~~---~~~~~p~~~~--~~~~~~~~~~G~~ 335 (404)
T 3fg2_P 304 AARLTG----D-AK---PYDGYPWFWS--DQGDDKLQIVGLT 335 (404)
T ss_dssp HHHTTT----C-CC---CCCCCCEEEE--EETTEEEEEEECC
T ss_pred HHHhCC----C-CC---CCCCCCceEe--EECCcEEEEEeCC
Confidence 999852 1 11 2346799998 6678888888864
No 32
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=2.8e-25 Score=254.82 Aligned_cols=222 Identities=19% Similarity=0.279 Sum_probs=166.2
Q ss_pred HHHHHhcCcEEEeceeecc--cccee--ccc-cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccC
Q psy16199 58 VELVKDLGVKIECERSLST--RDITI--EKL-RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKK 132 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~--~~v~~--~~~-~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~ 132 (842)
.+.+++.|++++.++.+.. ..+.+ +++ ..+.||+||||||++ |+.++++ |+.. . ++++.+++..
T Consensus 98 ~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~-p~~~~~~-g~~~-~-v~~~~~~~~~------- 166 (455)
T 1ebd_A 98 EGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSR-PIELPNF-KFSN-R-ILDSTGALNL------- 166 (455)
T ss_dssp HHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEE-ECCBTTB-CCCS-S-EECHHHHHTC-------
T ss_pred HHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCC-CCCCCCC-Cccc-e-EecHHHHhcc-------
Confidence 4556778999999886421 22333 233 456799999999998 7777777 5422 2 6665544321
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCC
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMS 207 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~ 207 (842)
...+++|+|||||++|+|+|..|.+.|. +||++++.+. .++..+.++ +.+.+.||++++++.
T Consensus 167 -----------~~~~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~gv~i~~~~~ 233 (455)
T 1ebd_A 167 -----------GEVPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE-ILSGFEKQMAAIIKKRLKKKGVEVVTNAL 233 (455)
T ss_dssp -----------SSCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS-SSTTSCHHHHHHHHHHHHHTTCEEEESEE
T ss_pred -----------ccCCCeEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCCc-cccccCHHHHHHHHHHHHHCCCEEEeCCE
Confidence 2235669999999999999999999997 4999999874 455444332 345678999999999
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCCC
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTMA 285 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~~ 285 (842)
++++..+++.+ .+.+.. +|+..++++|.||+|+|++ |+.++ ++.+ |++++++|+|.|| ++++
T Consensus 234 v~~i~~~~~~~-~v~~~~------------~g~~~~~~~D~vv~a~G~~-p~~~~l~~~~~-g~~~~~~G~i~vd-~~~~ 297 (455)
T 1ebd_A 234 AKGAEEREDGV-TVTYEA------------NGETKTIDADYVLVTVGRR-PNTDELGLEQI-GIKMTNRGLIEVD-QQCR 297 (455)
T ss_dssp EEEEEEETTEE-EEEEEE------------TTEEEEEEESEEEECSCEE-ESCSSSSTTTT-TCCBCTTSCBCCC-TTCB
T ss_pred EEEEEEeCCeE-EEEEEe------------CCceeEEEcCEEEECcCCC-cccCcCChhhc-CCccCCCCCEeeC-CCcc
Confidence 99997444333 244432 2334579999999999999 56655 5555 7889888999999 5799
Q ss_pred CCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 286 TSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 286 Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|+.|+|||+|||+..+.+...|..||+.||.+|.
T Consensus 298 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 298 TSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHc
Confidence 9999999999999888889999999999999985
No 33
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.92 E-value=7.6e-25 Score=238.53 Aligned_cols=265 Identities=17% Similarity=0.158 Sum_probs=190.6
Q ss_pred eecceeEeecCCCCccccc-----cCCCC---CCCHHHHHHHHHHHHhcCcEEEeceeecc----ccce-eccccccCCC
Q psy16199 24 LSKDLPDIERPVAALPDSS-----EIPQY---RLPFDAVNFEVELVKDLGVKIECERSLST----RDIT-IEKLRKDGYT 90 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~~-----~iP~~---~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~-~~~~~~~~yd 90 (842)
.|++|+|+|+..+||.+.+ ..|.+ ..+.++.++..+++++.++++++++.... ..++ ..+.....||
T Consensus 27 ~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~ 106 (320)
T 1trb_A 27 ANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCD 106 (320)
T ss_dssp TTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEE
T ss_pred CCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcC
Confidence 4899999999888997643 22333 22347777778888899999999874331 1122 2333455699
Q ss_pred EEEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHH
Q psy16199 91 AIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALR 168 (842)
Q Consensus 91 ~lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~ 168 (842)
+||+|||+. ++.+++| |.... .++++. ...+ .. ....++|+|||+|++|+|+|..|.+
T Consensus 107 ~lv~AtG~~-~~~~~~~-g~~~~~~~~~~~~-~~~~---~~--------------~~~~~~v~ViG~G~~g~e~A~~l~~ 166 (320)
T 1trb_A 107 ALIIATGAS-ARYLGLP-SEEAFKGRGVSAC-ATSD---GF--------------FYRNQKVAVIGGGNTAVEEALYLSN 166 (320)
T ss_dssp EEEECCCEE-ECCCCCH-HHHHTBTTTEESC-HHHH---GG--------------GGTTSEEEEECSSHHHHHHHHHHTT
T ss_pred EEEECCCCC-cCCCCCC-ChHHhCCceeEec-ccCC---cc--------------ccCCCeEEEECCCHHHHHHHHHHHh
Confidence 999999998 7777776 43221 223221 1111 10 1223559999999999999999999
Q ss_pred cCCcEEEEEEeecCccccCCHHHH----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccC-CceEE
Q psy16199 169 CGANKVLVVFRKGCTNIRAVPEEV----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE-EQRIK 243 (842)
Q Consensus 169 ~G~~~Vtlv~r~~~~~~~~~~~~~----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~-g~~~~ 243 (842)
.|. +|+++++.+. +...+... +.+.+.||++++++.++++..+++++.+|++.+.. + |+..+
T Consensus 167 ~g~-~Vtlv~~~~~--~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~----------~~g~~~~ 233 (320)
T 1trb_A 167 IAS-EVHLIHRRDG--FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQ----------NSDNIES 233 (320)
T ss_dssp TSS-EEEEECSSSS--CCCCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCT----------TCCCCEE
T ss_pred cCC-eEEEEEeCCc--cccCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEecc----------CCCceEE
Confidence 986 5999998863 22233222 33456799999999999998555577778776421 1 34467
Q ss_pred EECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCC----CCCCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHH
Q psy16199 244 LKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTT----MATSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHI 318 (842)
Q Consensus 244 i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~----~~Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I 318 (842)
+++|.||+|+|++ |+..+++. +++++ +|++.||+.. ++|+.|+|||+|||+.. +.++..|+.+|+.||.+|
T Consensus 234 i~~D~vv~a~G~~-p~~~~~~~--~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 309 (320)
T 1trb_A 234 LDVAGLFVAIGHS-PNTAIFEG--QLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDA 309 (320)
T ss_dssp EECSEEEECSCEE-ESCGGGTT--TSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEEeCCC-CChHHhcc--ccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHH
Confidence 9999999999999 66677662 57788 8999999542 48999999999999875 468999999999999999
Q ss_pred HHHHHhc
Q psy16199 319 HKYIQEK 325 (842)
Q Consensus 319 ~~~L~~~ 325 (842)
.++|+++
T Consensus 310 ~~~l~~~ 316 (320)
T 1trb_A 310 ERYLDGL 316 (320)
T ss_dssp HHHHTC-
T ss_pred HHHHHhc
Confidence 9999764
No 34
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.92 E-value=1.6e-25 Score=253.18 Aligned_cols=284 Identities=17% Similarity=0.139 Sum_probs=195.5
Q ss_pred ecc--eeEeecC-CCCcc---ccccCCCCC-CCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceeccccccCCCEE
Q psy16199 25 SKD--LPDIERP-VAALP---DSSEIPQYR-LPFDAVNFEVELVKDLGVKIECERSLST-----RDITIEKLRKDGYTAI 92 (842)
Q Consensus 25 g~~--V~l~Ek~-~~GG~---~~~~iP~~~-~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~l 92 (842)
|++ |+|+|++ .++.. +....+... .+.++ ....+++++.++++++++.+.. +.++++++..+.||+|
T Consensus 25 g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~l 103 (410)
T 3ef6_A 25 GFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAI 103 (410)
T ss_dssp TCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEE
T ss_pred CcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEE
Confidence 555 9999997 44332 111010000 11112 2234556788999999965532 3455666666779999
Q ss_pred EEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCc
Q psy16199 93 FIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGAN 172 (842)
Q Consensus 93 VlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~ 172 (842)
|||||+. |+.+++| |. +.+++++..+......... .....++|+|||+|++|+|+|..|.+.|.+
T Consensus 104 vlAtG~~-p~~~~ip-G~-~~~~v~~~~~~~d~~~l~~------------~~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 168 (410)
T 3ef6_A 104 VIATGSR-ARTMALP-GS-QLPGVVTLRTYGDVQVLRD------------SWTSATRLLIVGGGLIGCEVATTARKLGLS 168 (410)
T ss_dssp EECCCEE-ECCCCCT-TT-TSTTEECCCSHHHHHHHHH------------HCCTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEccCCc-ccCCCCC-Cc-cccceEEeccHHHHHHHHH------------HhccCCeEEEECCCHHHHHHHHHHHhCCCe
Confidence 9999998 8888888 63 5567765432222111100 012245599999999999999999999864
Q ss_pred EEEEEEeecCccccCCHHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECC
Q psy16199 173 KVLVVFRKGCTNIRAVPEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKAN 247 (842)
Q Consensus 173 ~Vtlv~r~~~~~~~~~~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D 247 (842)
||++++.+.......+++ .+.+.+.||++++++.++++.. ++++..|++.+ | .+++||
T Consensus 169 -Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~~~v~~~d-------------g--~~i~aD 231 (410)
T 3ef6_A 169 -VTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG-EGQLEQVMASD-------------G--RSFVAD 231 (410)
T ss_dssp -EEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC-SSSCCEEEETT-------------S--CEEECS
T ss_pred -EEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec-cCcEEEEEECC-------------C--CEEEcC
Confidence 999999874321112222 2345678999999999999974 44555566643 2 278999
Q ss_pred EEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCch---------hHHHHHHHHHHHHHHH
Q psy16199 248 YIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSD---------TTVESVNDGKTAAWHI 318 (842)
Q Consensus 248 ~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~---------~~~~A~~~G~~aA~~I 318 (842)
.||+|+|++ |+.++++.+ |++++ +| |.|| ++++|+.|+|||+|||+..+. ++..|..||+.||.+|
T Consensus 232 ~Vv~a~G~~-p~~~l~~~~-gl~~~-~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i 306 (410)
T 3ef6_A 232 SALICVGAE-PADQLARQA-GLACD-RG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAI 306 (410)
T ss_dssp EEEECSCEE-ECCHHHHHT-TCCBS-SS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCe-ecHHHHHhC-CCccC-Ce-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHH
Confidence 999999999 677788887 88887 44 9999 688999999999999976432 4789999999999998
Q ss_pred HHHHHhcCCCCCCCCCCCCceeeccccccceeeecccc
Q psy16199 319 HKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLK 356 (842)
Q Consensus 319 ~~~L~~~~~~~~~~~~~~p~~~t~i~~~~L~~~~~G~~ 356 (842)
.. . ..+ .+..|++|+ +++++++...|..
T Consensus 307 ~g----~-~~~---~~~~p~~~~--~~~~~~~~~~G~~ 334 (410)
T 3ef6_A 307 LG----K-NVS---APQLPVSWT--EIAGHRMQMAGDI 334 (410)
T ss_dssp TT----C-CCC---CCBCCEEEE--EETTEEEEEESCS
T ss_pred cC----C-CCC---CCCCCeeEE--EECCceEEEEcCC
Confidence 52 1 122 335788888 4567777877754
No 35
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.92 E-value=1.3e-24 Score=248.83 Aligned_cols=268 Identities=17% Similarity=0.196 Sum_probs=178.7
Q ss_pred cccccCceeeecceeEeecC-CCCccccccCCCC----CCCHHHHHHHHHHH-HhcCcEEEeceeecc-----ccceecc
Q psy16199 15 IEMSTAKVCLSKDLPDIERP-VAALPDSSEIPQY----RLPFDAVNFEVELV-KDLGVKIECERSLST-----RDITIEK 83 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~-~~GG~~~~~iP~~----~~~~~~v~~~~~~l-~~~gV~i~~~~~v~~-----~~v~~~~ 83 (842)
+|...++...|++|+|+|+. ..+ ...+++|.+ ..+.+++.+..+++ ++.++++++++.+.. +.+..++
T Consensus 18 aA~~L~~~~~~~~V~vie~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~ 96 (449)
T 3kd9_A 18 AASRVKRLKPEWDVKVFEATEWVS-HAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENG 96 (449)
T ss_dssp HHHHHHHHCTTSEEEEECSSSCCC-------------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSS
T ss_pred HHHHHHHhCcCCCEEEEECCCccc-cCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecCCCEEEECC
Confidence 34444555568999999997 444 334555543 23334555554555 688999999965532 2233333
Q ss_pred c-cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHH
Q psy16199 84 L-RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDC 162 (842)
Q Consensus 84 ~-~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~ 162 (842)
. ..+.||+||||||+. |+.+++| |+ +.+++++..+.......... ......++|+|||||++|+|+
T Consensus 97 g~~~~~~d~lviAtG~~-p~~p~i~-G~-~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~vvViGgG~~g~E~ 163 (449)
T 3kd9_A 97 GEKSYEWDYLVFANGAS-PQVPAIE-GV-NLKGVFTADLPPDALAIREY----------MEKYKVENVVIIGGGYIGIEM 163 (449)
T ss_dssp SEEEEECSEEEECCCEE-ECCCSCB-TT-TSTTEECSCSTHHHHHHHHH----------HSSSCCCEEEEECCSHHHHHH
T ss_pred ceEEEEcCEEEECCCCC-CCCCCCC-CC-CCCCEEEeCCHHHHHHHHHH----------HHhcCCCeEEEECCCHHHHHH
Confidence 3 256799999999998 8888888 64 55677654332222111000 001123459999999999999
Q ss_pred HHHHHHcCCcEEEEEEeecCccccC-CHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeec
Q psy16199 163 ATSALRCGANKVLVVFRKGCTNIRA-VPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVE 236 (842)
Q Consensus 163 A~~l~~~G~~~Vtlv~r~~~~~~~~-~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~ 236 (842)
|..|.+.|.+ ||++++.+. .++. .++++ +.+.+. |++++++.++++.. ++++..+ +.
T Consensus 164 A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~-~~~v~~v-~~------------ 226 (449)
T 3kd9_A 164 AEAFAAQGKN-VTMIVRGER-VLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEG-EERVEKV-VT------------ 226 (449)
T ss_dssp HHHHHHTTCE-EEEEESSSS-TTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEEC-SSSCCEE-EE------------
T ss_pred HHHHHhCCCe-EEEEEcCCc-cchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEec-cCcEEEE-Ee------------
Confidence 9999999964 999999875 3443 44432 223455 99999999999973 3344322 21
Q ss_pred cCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC------C----chhHHH
Q psy16199 237 DEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN------L----SDTTVE 306 (842)
Q Consensus 237 ~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~------~----~~~~~~ 306 (842)
++ .++++|.||+|+|++ |+.++++.+ |++++++|+|.|| ++++|+.|+|||+|||+. + +.++..
T Consensus 227 -~g--~~i~~D~Vv~a~G~~-p~~~l~~~~-gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~ 300 (449)
T 3kd9_A 227 -DA--GEYKAELVILATGIK-PNIELAKQL-GVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPA 300 (449)
T ss_dssp -TT--EEEECSEEEECSCEE-ECCHHHHHT-TCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHH
T ss_pred -CC--CEEECCEEEEeeCCc-cCHHHHHhC-CccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHH
Confidence 12 378999999999999 677788877 8999999999999 689999999999999973 2 367899
Q ss_pred HHHHHHHHHHHHH
Q psy16199 307 SVNDGKTAAWHIH 319 (842)
Q Consensus 307 A~~~G~~aA~~I~ 319 (842)
|..||+.||.+|.
T Consensus 301 A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 301 GNKMGYVAGSNIA 313 (449)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999985
No 36
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.92 E-value=8.1e-25 Score=254.86 Aligned_cols=264 Identities=16% Similarity=0.163 Sum_probs=197.2
Q ss_pred eecceeEeecCCCCcccc--ccCCCC-----CCCHHHHHHHHHHHHhcCcEEEeceeecc----------ccceeccccc
Q psy16199 24 LSKDLPDIERPVAALPDS--SEIPQY-----RLPFDAVNFEVELVKDLGVKIECERSLST----------RDITIEKLRK 86 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~--~~iP~~-----~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----------~~v~~~~~~~ 86 (842)
.|++|+|+|+ ..||.+. .+++.+ ....++.++..+.+++.|++++.++.+.. ..++++++..
T Consensus 234 ~G~~v~lie~-~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~ 312 (521)
T 1hyu_A 234 KGIRTGLMGE-RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAV 312 (521)
T ss_dssp TTCCEEEECS-STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCE
T ss_pred CCCeEEEEEC-CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCE
Confidence 4899999986 5788764 233322 22346777778888899999999965421 1234445545
Q ss_pred cCCCEEEEccCCCCCCCCCCCCCCcccc--CceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHH
Q psy16199 87 DGYTAIFIGIGKPNANVIPIFQGLTEEM--GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCAT 164 (842)
Q Consensus 87 ~~yd~lVlAtGs~~~~~~~i~~G~~~~~--gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~ 164 (842)
+.||+||+|||++ ++.+++| |..+.. +++ +|..|+. ....+++|+|||||++|+|+|.
T Consensus 313 ~~~d~vVlAtG~~-~~~~~ip-G~~~~~~~~v~----------------~~~~~~~--~~~~~k~V~ViGgG~~g~E~A~ 372 (521)
T 1hyu_A 313 LKARSIIIATGAK-WRNMNVP-GEDQYRTKGVT----------------YCPHCDG--PLFKGKRVAVIGGGNSGVEAAI 372 (521)
T ss_dssp EEEEEEEECCCEE-ECCCCCT-TTTTTTTTTEE----------------CCTTCCG--GGGBTSEEEEECCSHHHHHHHH
T ss_pred EEcCEEEECCCCC-cCCCCCC-ChhhhcCceEE----------------EeecCch--hhcCCCeEEEECCCHHHHHHHH
Confidence 6799999999998 7777787 543321 122 2333332 1122345999999999999999
Q ss_pred HHHHcCCcEEEEEEeecCccccCCHHHHHHHHh-cCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEE
Q psy16199 165 SALRCGANKVLVVFRKGCTNIRAVPEEVQLAWE-EKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIK 243 (842)
Q Consensus 165 ~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~-~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~ 243 (842)
.|++.|. +||++++.+. +.......+.+.+ .||++++++.++++..+++++.++++.+.. +|+..+
T Consensus 373 ~L~~~g~-~Vtlv~~~~~--l~~~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~----------~g~~~~ 439 (521)
T 1hyu_A 373 DLAGIVE-HVTLLEFAPE--MKADQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRV----------SGDIHS 439 (521)
T ss_dssp HHHHHBS-EEEEECSSSS--CCSCHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETT----------TCCEEE
T ss_pred HHHhhCC-EEEEEEeCcc--cCcCHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCC----------CCceEE
Confidence 9999986 5999998863 3333444455666 599999999999998556678778887531 355568
Q ss_pred EECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCc-hhHHHHHHHHHHHHHHHHHHH
Q psy16199 244 LKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLS-DTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 244 i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~-~~~~~A~~~G~~aA~~I~~~L 322 (842)
+++|.|++++|++ |++++++. +++++++|+|.|| ++++|+.|+|||+|||+..+ .++..|+.+|+.||.+|.++|
T Consensus 440 i~~D~vi~a~G~~-pn~~~l~~--~l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 440 VALAGIFVQIGLL-PNTHWLEG--ALERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp EECSEEEECCCEE-ESCGGGTT--TSCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCC-CCchHHhh--hhccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHH
Confidence 9999999999999 67677765 3788889999999 68999999999999998754 689999999999999999999
Q ss_pred Hhc
Q psy16199 323 QEK 325 (842)
Q Consensus 323 ~~~ 325 (842)
.++
T Consensus 516 ~~~ 518 (521)
T 1hyu_A 516 IRT 518 (521)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
No 37
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.92 E-value=1.1e-25 Score=260.55 Aligned_cols=207 Identities=23% Similarity=0.272 Sum_probs=159.6
Q ss_pred ccceeccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCC
Q psy16199 77 RDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAG 156 (842)
Q Consensus 77 ~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG 156 (842)
+.+.+++...+.||+||||||++ |+.++++++ ...+++++.+++.. ...+++|+|||||
T Consensus 125 ~~v~~~~~~~~~~d~lViATGs~-p~~p~~~~~--~~~~v~t~~~~~~~------------------~~~~k~vvViGgG 183 (492)
T 3ic9_A 125 HTLQVDDHSQVIAKRIVIATGSR-PNYPEFLAA--AGSRLLTNDNLFEL------------------NDLPKSVAVFGPG 183 (492)
T ss_dssp TEEEETTTEEEEEEEEEECCCEE-CCCCHHHHT--TGGGEECHHHHTTC------------------SSCCSEEEEESSC
T ss_pred CEEEEcCCcEEEeCEEEEccCCC-CcCCCCCCc--cCCcEEcHHHHhhh------------------hhcCCeEEEECCC
Confidence 44556555667799999999998 777776632 23567776555431 3345679999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHHH-----HHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCC
Q psy16199 157 DTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQ-----LAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEK 231 (842)
Q Consensus 157 ~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~-----~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~ 231 (842)
++|+|+|..|.+.|.+ ||++++.+. .++..+.++. .+.+. |++++++.++++...++++. +++.+.
T Consensus 184 ~ig~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~-v~~~~~----- 254 (492)
T 3ic9_A 184 VIGLELGQALSRLGVI-VKVFGRSGS-VANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVE-VIYFDK----- 254 (492)
T ss_dssp HHHHHHHHHHHHTTCE-EEEECCTTC-CTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEE-EEEECT-----
T ss_pred HHHHHHHHHHHHcCCe-EEEEEECCc-ccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEE-EEEEeC-----
Confidence 9999999999999975 999999874 4455444332 23334 99999999999975555554 544421
Q ss_pred CCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHH
Q psy16199 232 GEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVN 309 (842)
Q Consensus 232 G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~ 309 (842)
+|+..++++|.||+|+|++ |+..+ ++.+ |++++++|++.||+++++|+.|+|||+|||+..+..++.|..
T Consensus 255 ------~G~~~~i~~D~Vi~a~G~~-p~~~~l~l~~~-gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~ 326 (492)
T 3ic9_A 255 ------SGQKTTESFQYVLAATGRK-ANVDKLGLENT-SIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAAD 326 (492)
T ss_dssp ------TCCEEEEEESEEEECSCCE-ESCSSSCGGGS-CCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHH
T ss_pred ------CCceEEEECCEEEEeeCCc-cCCCCCChhhc-CCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHH
Confidence 2444689999999999999 56665 5666 899999999999977899999999999999988888999999
Q ss_pred HHHHHHHHHHHH
Q psy16199 310 DGKTAAWHIHKY 321 (842)
Q Consensus 310 ~G~~aA~~I~~~ 321 (842)
||+.||.+|..+
T Consensus 327 ~g~~aa~~i~~~ 338 (492)
T 3ic9_A 327 DGKVAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC
Confidence 999999999754
No 38
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.92 E-value=2.7e-25 Score=257.43 Aligned_cols=218 Identities=17% Similarity=0.241 Sum_probs=165.8
Q ss_pred HHHHhc-CcEEEeceeec--cccceec---c-----ccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHh
Q psy16199 59 ELVKDL-GVKIECERSLS--TRDITIE---K-----LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVA 127 (842)
Q Consensus 59 ~~l~~~-gV~i~~~~~v~--~~~v~~~---~-----~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~ 127 (842)
..+++. +|+++.++... .+.++++ + ...+.||+||||||++ |+.+++| |. ..++++.+++..
T Consensus 115 ~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs~-p~~p~i~-G~---~~~~~~~~~~~~-- 187 (495)
T 2wpf_A 115 GMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSW-PQMPAIP-GI---EHCISSNEAFYL-- 187 (495)
T ss_dssp HHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE-ECCCCCT-TG---GGCEEHHHHTTC--
T ss_pred HHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCCC-cCCCCCC-Cc---cccccHHHHHhh--
Confidence 345667 99999987432 1345554 2 4456799999999998 7777887 54 245665554431
Q ss_pred hcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHc---CCcEEEEEEeecCccccCCHHHH-----HHHHhcC
Q psy16199 128 TSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRC---GANKVLVVFRKGCTNIRAVPEEV-----QLAWEEK 199 (842)
Q Consensus 128 ~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~---G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~g 199 (842)
...+++++|||||++|+|+|..|.+. |.+ ||++++.+. .++..++++ +.+.+.|
T Consensus 188 ----------------~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~G 249 (495)
T 2wpf_A 188 ----------------PEPPRRVLTVGGGFISVEFAGIFNAYKPPGGK-VTLCYRNNL-ILRGFDETIREEVTKQLTANG 249 (495)
T ss_dssp ----------------SSCCSEEEEECSSHHHHHHHHHHHHHCCTTCE-EEEEESSSS-SCTTSCHHHHHHHHHHHHHTT
T ss_pred ----------------hhcCCeEEEECCCHHHHHHHHHHHhhCCCCCe-EEEEEcCCc-cccccCHHHHHHHHHHHHhCC
Confidence 23456799999999999999999999 875 999999874 455554432 3456789
Q ss_pred cEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCCe
Q psy16199 200 CEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGYP 277 (842)
Q Consensus 200 V~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~i 277 (842)
|++++++.++++...++....|++.+ |+ ++++|.||+|+|++ |+.+ + ++.+ |++++++|+|
T Consensus 250 V~i~~~~~v~~i~~~~~~~~~v~~~~-------------G~--~i~~D~vv~a~G~~-p~~~~L~l~~~-gl~~~~~G~i 312 (495)
T 2wpf_A 250 IEIMTNENPAKVSLNTDGSKHVTFES-------------GK--TLDVDVVMMAIGRI-PRTNDLQLGNV-GVKLTPKGGV 312 (495)
T ss_dssp CEEEESCCEEEEEECTTSCEEEEETT-------------SC--EEEESEEEECSCEE-ECCGGGTGGGT-TCCBCTTSSB
T ss_pred CEEEeCCEEEEEEEcCCceEEEEECC-------------Cc--EEEcCEEEECCCCc-ccccccchhhc-CccCCCCCCE
Confidence 99999999999974333323344432 32 68999999999999 5655 4 4565 8999989999
Q ss_pred eeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 278 ~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
.|| ++++|+.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 313 ~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 313 QVD-EFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp CCC-TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEC-CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhc
Confidence 999 68999999999999999877889999999999999985
No 39
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.92 E-value=1.9e-25 Score=255.88 Aligned_cols=266 Identities=16% Similarity=0.156 Sum_probs=185.0
Q ss_pred cccccCceeeecceeEeecC-CCCccccccCCCC-----CCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceec-
Q psy16199 15 IEMSTAKVCLSKDLPDIERP-VAALPDSSEIPQY-----RLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIE- 82 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~-~~GG~~~~~iP~~-----~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~- 82 (842)
+|...++...|++|+|+|++ .+| ..+++++.+ ..+.++.....+++++.++++++++.+.. +.+.+.
T Consensus 17 aA~~L~~~~~g~~V~vie~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~ 95 (452)
T 3oc4_A 17 AAIASRKKYPQAEISLIDKQATVG-YLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTR 95 (452)
T ss_dssp HHHHHHHHCSSSEEEEECSSSCCS-SCCC----------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhCcCCcEEEEECCCCCc-ccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEe
Confidence 44555565669999999997 444 333333322 11223322245667889999998876642 223331
Q ss_pred --cccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHH
Q psy16199 83 --KLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160 (842)
Q Consensus 83 --~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~ 160 (842)
+...+.||+||||||++ |+.+++| |. +.+++++..++....... .....+++++|||+|++|+
T Consensus 96 ~~~~~~~~~d~lviAtG~~-p~~p~i~-g~-~~~~v~~~~~~~~~~~~~------------~~~~~~~~vvViGgG~~g~ 160 (452)
T 3oc4_A 96 KEEQQWYSYDKLILATGAS-QFSTQIR-GS-QTEKLLKYKFLSGALAAV------------PLLENSQTVAVIGAGPIGM 160 (452)
T ss_dssp TTEEEEEECSEEEECCCCC-BCCCCCB-TT-TCTTEEEGGGCC----CC------------HHHHTCSEEEEECCSHHHH
T ss_pred cCceEEEEcCEEEECCCcc-cCCCCCC-CC-CCCCEEEeCCHHHHHHHH------------HHHhcCCEEEEECCCHHHH
Confidence 33456799999999998 8888888 64 456777654433211100 0012346699999999999
Q ss_pred HHHHHHHHcCCcEEEEEEeecCccccC-CHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCe
Q psy16199 161 DCATSALRCGANKVLVVFRKGCTNIRA-VPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEW 234 (842)
Q Consensus 161 e~A~~l~~~G~~~Vtlv~r~~~~~~~~-~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~ 234 (842)
|+|..+.+.|.+ ||++++.+. .++. .+.++ +.+.+.||++++++.++++..+++++ .|.+.
T Consensus 161 E~A~~l~~~g~~-Vtlv~~~~~-~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~~---------- 227 (452)
T 3oc4_A 161 EAIDFLVKMKKT-VHVFESLEN-LLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETS---------- 227 (452)
T ss_dssp HHHHHHHHTTCE-EEEEESSSS-SSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEES----------
T ss_pred HHHHHHHhCCCe-EEEEEccCc-cccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEEC----------
Confidence 999999999975 999999874 3442 33332 33567799999999999997555665 34442
Q ss_pred eccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCc----------hhH
Q psy16199 235 VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLS----------DTT 304 (842)
Q Consensus 235 ~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~----------~~~ 304 (842)
++ ++++|.||+|+|++ |+..+++. +++++++|+|.|| ++++|+.|+|||+|||+..+ .++
T Consensus 228 ---~g---~i~aD~Vv~A~G~~-p~~~~l~~--~~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~ 297 (452)
T 3oc4_A 228 ---EQ---EISCDSGIFALNLH-PQLAYLDK--KIQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLV 297 (452)
T ss_dssp ---SC---EEEESEEEECSCCB-CCCSSCCT--TSCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCH
T ss_pred ---CC---EEEeCEEEECcCCC-CChHHHHh--hhccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchH
Confidence 12 68999999999999 66666654 3788889999999 68999999999999998743 478
Q ss_pred HHHHHHHHHHHHHHH
Q psy16199 305 VESVNDGKTAAWHIH 319 (842)
Q Consensus 305 ~~A~~~G~~aA~~I~ 319 (842)
..|..||+.||.+|.
T Consensus 298 ~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 298 NNAVRTGLVVANNLE 312 (452)
T ss_dssp HHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHhc
Confidence 899999999999984
No 40
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.92 E-value=5.6e-25 Score=251.86 Aligned_cols=217 Identities=18% Similarity=0.210 Sum_probs=163.7
Q ss_pred HHHHhcCcEEEeceee--ccccceeccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccC
Q psy16199 59 ELVKDLGVKIECERSL--STRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCG 136 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v--~~~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~ 136 (842)
..+++.+++++.++.. +.+.+.+ ++..+.||+||||||++ |+.+++| |. ..++++.+++..
T Consensus 101 ~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~-p~~p~i~-g~---~~~~~~~~~~~~----------- 163 (450)
T 1ges_A 101 NVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGR-PSHPDIP-GV---EYGIDSDGFFAL----------- 163 (450)
T ss_dssp HHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEE-ECCCCST-TG---GGSBCHHHHHHC-----------
T ss_pred HHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCC-CCCCCCC-Cc---cceecHHHhhhh-----------
Confidence 3456789999988653 2233444 33456799999999998 7777787 54 235565555431
Q ss_pred CCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEE
Q psy16199 137 GCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQV 211 (842)
Q Consensus 137 ~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v 211 (842)
...+++|+|||||++|+|+|..|.+.|.+ |+++++.+. .++..+.++ +.+.+.||++++++.++++
T Consensus 164 -------~~~~~~vvViGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 234 (450)
T 1ges_A 164 -------PALPERVAVVGAGYIGVELGGVINGLGAK-THLFEMFDA-PLPSFDPMISETLVEVMNAEGPQLHTNAIPKAV 234 (450)
T ss_dssp -------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEE
T ss_pred -------hhcCCeEEEECCCHHHHHHHHHHHhcCCE-EEEEEeCCc-hhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 22356799999999999999999999974 999999864 444444332 3456789999999999999
Q ss_pred EccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCCeeeCCCCCCCCCC
Q psy16199 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGYPEVNYTTMATSVP 289 (842)
Q Consensus 212 ~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~i~vd~~~~~Ts~~ 289 (842)
...++....|++. +|+ ++++|.||+|+|++ |+.+ + ++.+ |++++++|+|.|| ++++|+.|
T Consensus 235 ~~~~~~~~~v~~~-------------~g~--~i~~D~vv~a~G~~-p~~~~l~~~~~-gl~~~~~g~i~vd-~~~~t~~~ 296 (450)
T 1ges_A 235 VKNTDGSLTLELE-------------DGR--SETVDCLIWAIGRE-PANDNINLEAA-GVKTNEKGYIVVD-KYQNTNIE 296 (450)
T ss_dssp EECTTSCEEEEET-------------TSC--EEEESEEEECSCEE-ESCTTSCHHHH-TCCBCTTSCBCCC-TTSBCSST
T ss_pred EEeCCcEEEEEEC-------------CCc--EEEcCEEEECCCCC-cCCCCCCchhc-CceECCCCCEeEC-CCCccCCC
Confidence 7433332234443 232 68999999999999 5554 4 5666 8999999999999 67899999
Q ss_pred CeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 290 GVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 290 gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|||+|||+..+..+..|..||+.||.+|.
T Consensus 297 ~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 326 (450)
T 1ges_A 297 GIYAVGDNTGAVELTPVAVAAGRRLSERLF 326 (450)
T ss_dssp TEEECSGGGTSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEeccCCCCccHHHHHHHHHHHHHHHc
Confidence 999999998777889999999999999986
No 41
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=1.7e-25 Score=257.73 Aligned_cols=225 Identities=20% Similarity=0.193 Sum_probs=168.6
Q ss_pred HHHHHhcCcEEEeceeecc--cccee--ccc--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhccc
Q psy16199 58 VELVKDLGVKIECERSLST--RDITI--EKL--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~--~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
.+.+++.+++++.++.+.. ..+++ +++ ..+.||+||+|||++ |+.++++ |+ +..+++++.+++..
T Consensus 103 ~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~-p~~p~~~-g~-~~~~v~~~~~~~~~------ 173 (470)
T 1dxl_A 103 EGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSD-VKSLPGV-TI-DEKKIVSSTGALAL------ 173 (470)
T ss_dssp HHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEE-ECCBTTB-CC-CSSSEECHHHHTTC------
T ss_pred HHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCC-CCCCCCC-CC-CcccEEeHHHhhhh------
Confidence 3456677999999875431 12223 233 346799999999998 7777777 54 33467776554431
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFM 206 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~ 206 (842)
...+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++..++++ +.+.+.||++++++
T Consensus 174 ------------~~~~~~vvViGgG~~g~e~A~~l~~~g~~-Vtli~~~~~-~l~~~~~~~~~~l~~~l~~~gv~i~~~~ 239 (470)
T 1dxl_A 174 ------------SEIPKKLVVIGAGYIGLEMGSVWGRIGSE-VTVVEFASE-IVPTMDAEIRKQFQRSLEKQGMKFKLKT 239 (470)
T ss_dssp ------------SSCCSEEEESCCSHHHHHHHHHHHHHTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHSSCCEECSE
T ss_pred ------------hhcCCeEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCCc-ccccccHHHHHHHHHHHHHcCCEEEeCC
Confidence 22356799999999999999999999974 999999874 455444432 33567899999999
Q ss_pred CceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCC
Q psy16199 207 SPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTM 284 (842)
Q Consensus 207 ~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~ 284 (842)
.++++...++.+ .+.+.+.. +|+..++++|.||+|+|++ |+..+ ++.+ |++++++|+|.|| +++
T Consensus 240 ~v~~i~~~~~~~-~v~~~~~~----------~g~~~~~~~D~vv~a~G~~-p~~~~l~~~~~-gl~~~~~G~i~vd-~~~ 305 (470)
T 1dxl_A 240 KVVGVDTSGDGV-KLTVEPSA----------GGEQTIIEADVVLVSAGRT-PFTSGLNLDKI-GVETDKLGRILVN-ERF 305 (470)
T ss_dssp EEEEEECSSSSE-EEEEEESS----------SCCCEEEEESEEECCCCEE-ECCTTSCCTTT-TCCBCSSSCBCCC-TTC
T ss_pred EEEEEEEcCCeE-EEEEEecC----------CCcceEEECCEEEECCCCC-cCCCCCCchhc-CCccCCCCCEeEC-cCC
Confidence 999997443343 35554210 1333579999999999999 56665 5666 8999888999999 579
Q ss_pred CCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 285 ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 285 ~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|+.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 306 ~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 340 (470)
T 1dxl_A 306 STNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLA 340 (470)
T ss_dssp BCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHc
Confidence 99999999999999877889999999999999986
No 42
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.92 E-value=2.3e-25 Score=256.79 Aligned_cols=226 Identities=17% Similarity=0.172 Sum_probs=169.0
Q ss_pred HHHHHhcCcEEEeceeec--ccccee--cc-c-cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhccc
Q psy16199 58 VELVKDLGVKIECERSLS--TRDITI--EK-L-RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~--~~~v~~--~~-~-~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
.+++++.||+++.++.+. ...+++ ++ . ..+.||+||||||++ |+.++++ |+ +..+++++.+++..
T Consensus 104 ~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~-p~~p~i~-g~-~~~~v~t~~~~~~~------ 174 (474)
T 1zmd_A 104 AHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSE-VTPFPGI-TI-DEDTIVSSTGALSL------ 174 (474)
T ss_dssp HHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEE-ECCCTTC-CC-CSSSEECHHHHTTC------
T ss_pred HHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCC-CCCCCCC-CC-CcCcEEcHHHHhhc------
Confidence 455677899999987642 122223 22 2 346799999999998 7777887 54 33467776554431
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcccc-CCHHHH-----HHHHhcCcEEecC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIR-AVPEEV-----QLAWEEKCEFLPF 205 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~-~~~~~~-----~~~~~~gV~i~~~ 205 (842)
...+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++ ..++++ +.+.+.||+++++
T Consensus 175 ------------~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~Gv~i~~~ 240 (474)
T 1zmd_A 175 ------------KKVPEKMVVIGAGVIGVELGSVWQRLGAD-VTAVEFLGH-VGGVGIDMEISKNFQRILQKQGFKFKLN 240 (474)
T ss_dssp ------------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSCSSCCHHHHHHHHHHHHHTTCEEECS
T ss_pred ------------cccCceEEEECCCHHHHHHHHHHHHcCCE-EEEEeccCc-cCCcccCHHHHHHHHHHHHHCCCEEEeC
Confidence 22356799999999999999999999975 999999874 444 444432 3456789999999
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCC
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTT 283 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~ 283 (842)
+.++++..+++....+++.+.. +++..++++|.||+|+|++ |+..+ ++.+ |++++++|+|.|| ++
T Consensus 241 ~~v~~i~~~~~~~~~v~~~~~~----------~~~~~~i~~D~vv~a~G~~-p~~~~l~l~~~-g~~~~~~G~i~vd-~~ 307 (474)
T 1zmd_A 241 TKVTGATKKSDGKIDVSIEAAS----------GGKAEVITCDVLLVCIGRR-PFTKNLGLEEL-GIELDPRGRIPVN-TR 307 (474)
T ss_dssp EEEEEEEECTTSCEEEEEEETT----------SCCCEEEEESEEEECSCEE-ECCTTSSHHHH-TCCCCTTSCCCCC-TT
T ss_pred ceEEEEEEcCCceEEEEEEecC----------CCCceEEEcCEEEECcCCC-cCCCcCCchhc-CCccCCCCCEEEC-cC
Confidence 9999997544331234443210 1233579999999999999 56665 5666 8999988999999 57
Q ss_pred CCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 284 MATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 284 ~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
++|+.|+|||+|||+..+.+++.|..||+.||.+|.
T Consensus 308 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 343 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMA 343 (474)
T ss_dssp CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhc
Confidence 999999999999999888889999999999999985
No 43
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.92 E-value=1.9e-25 Score=258.34 Aligned_cols=218 Identities=16% Similarity=0.173 Sum_probs=165.2
Q ss_pred HHHHhc-CcEEEeceeec--cccceec-----cc---cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHh
Q psy16199 59 ELVKDL-GVKIECERSLS--TRDITIE-----KL---RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVA 127 (842)
Q Consensus 59 ~~l~~~-gV~i~~~~~v~--~~~v~~~-----~~---~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~ 127 (842)
+.+++. ||+++.++... .+.+.+. ++ ..+.||+||||||++ |+.+++| |. +.++++.+++..
T Consensus 111 ~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~-p~~p~i~-g~---~~~~~~~~~~~~-- 183 (490)
T 1fec_A 111 GMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSW-PQHLGIE-GD---DLCITSNEAFYL-- 183 (490)
T ss_dssp HHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE-ECCCCSB-TG---GGCBCHHHHTTC--
T ss_pred HHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCC-CCCCCCC-Cc---cceecHHHHhhh--
Confidence 445677 99999987432 1334452 33 456799999999998 7777787 53 245555544431
Q ss_pred hcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHc---CCcEEEEEEeecCccccCCHHHH-----HHHHhcC
Q psy16199 128 TSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRC---GANKVLVVFRKGCTNIRAVPEEV-----QLAWEEK 199 (842)
Q Consensus 128 ~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~---G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~g 199 (842)
...+++++|||||++|+|+|..|.+. |.+ ||++++.+. .++..+.++ +.+.+.|
T Consensus 184 ----------------~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~G 245 (490)
T 1fec_A 184 ----------------DEAPKRALCVGGGYISIEFAGIFNAYKARGGQ-VDLAYRGDM-ILRGFDSELRKQLTEQLRANG 245 (490)
T ss_dssp ----------------SSCCSEEEEECSSHHHHHHHHHHHHHSCTTCE-EEEEESSSS-SSTTSCHHHHHHHHHHHHHTT
T ss_pred ----------------hhcCCeEEEECCCHHHHHHHHHHHhhccCcCe-EEEEEcCCC-cccccCHHHHHHHHHHHHhCC
Confidence 23456799999999999999999999 975 999999874 455544432 3456789
Q ss_pred cEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCCe
Q psy16199 200 CEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGYP 277 (842)
Q Consensus 200 V~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~i 277 (842)
|++++++.++++..+++....|++. +|+ ++++|.||+|+|++ |+.+ + ++.+ |++++++|+|
T Consensus 246 V~i~~~~~v~~i~~~~~~~~~v~~~-------------~G~--~i~~D~vv~a~G~~-p~~~~L~l~~~-gl~~~~~G~I 308 (490)
T 1fec_A 246 INVRTHENPAKVTKNADGTRHVVFE-------------SGA--EADYDVVMLAIGRV-PRSQTLQLEKA-GVEVAKNGAI 308 (490)
T ss_dssp EEEEETCCEEEEEECTTSCEEEEET-------------TSC--EEEESEEEECSCEE-ESCTTSCGGGG-TCCBCTTSCB
T ss_pred CEEEeCCEEEEEEEcCCCEEEEEEC-------------CCc--EEEcCEEEEccCCC-cCccccCchhc-CccCCCCCCE
Confidence 9999999999997433332334443 232 68999999999999 5554 4 5666 8999989999
Q ss_pred eeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 278 ~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
.|| ++++|+.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 309 ~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 349 (490)
T 1fec_A 309 KVD-AYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVF 349 (490)
T ss_dssp CCC-TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEC-CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhc
Confidence 999 68999999999999999877889999999999999985
No 44
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.92 E-value=2.6e-25 Score=255.60 Aligned_cols=222 Identities=19% Similarity=0.228 Sum_probs=165.8
Q ss_pred HHHHhcCcEEEeceeec--cccceeccccccCCCEEEEccCCCCCCCCC-CCCCCccccCceehhcchHHHhhcccCCcc
Q psy16199 59 ELVKDLGVKIECERSLS--TRDITIEKLRKDGYTAIFIGIGKPNANVIP-IFQGLTEEMGFYTSKTFLPRVATSSKKGLC 135 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~--~~~v~~~~~~~~~yd~lVlAtGs~~~~~~~-i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c 135 (842)
+++++.||+++.++.+. .+.++++ +..+.||+||||||++ |+.++ ++ + ...++++.+++...
T Consensus 101 ~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~-p~~p~gi~-~---~~~v~~~~~~~~l~--------- 165 (464)
T 2eq6_A 101 TLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSE-PLELKGFP-F---GEDVWDSTRALKVE--------- 165 (464)
T ss_dssp HHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEE-ECCBTTBC-C---SSSEECHHHHTCGG---------
T ss_pred HHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCC-CCCCCCCC-C---CCcEEcHHHHHhhh---------
Confidence 45667899999987542 1335554 3456799999999998 76665 55 3 12567665554321
Q ss_pred CCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceE
Q psy16199 136 GGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 136 ~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~ 210 (842)
...+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++++.+++
T Consensus 166 --------~~~~~~vvViGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 235 (464)
T 2eq6_A 166 --------EGLPKRLLVIGGGAVGLELGQVYRRLGAE-VTLIEYMPE-ILPQGDPETAALLRRALEKEGIRVRTKTKAVG 235 (464)
T ss_dssp --------GCCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred --------hhcCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEEcCCc-cccccCHHHHHHHHHHHHhcCCEEEcCCEEEE
Confidence 11356799999999999999999999975 999999874 445444432 335678999999999999
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCCCCCC
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTMATSV 288 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~~Ts~ 288 (842)
+...++.+ .+++.+. .+|+..++++|.|++|+|++ |+..+ ++.+ |++++++|+|.|| ++++|+.
T Consensus 236 i~~~~~~~-~v~~~~~----------~~g~~~~i~~D~vv~a~G~~-p~~~~l~l~~~-g~~~~~~G~i~vd-~~~~t~~ 301 (464)
T 2eq6_A 236 YEKKKDGL-HVRLEPA----------EGGEGEEVVVDKVLVAVGRK-PRTEGLGLEKA-GVKVDERGFIRVN-ARMETSV 301 (464)
T ss_dssp EEEETTEE-EEEEEET----------TCCSCEEEEESEEEECSCEE-ESCTTSSHHHH-TCCBCTTSCBCCC-TTCBCSS
T ss_pred EEEeCCEE-EEEEeec----------CCCceeEEEcCEEEECCCcc-cCCCCCChhhc-CceecCCCCEEEC-CCcccCC
Confidence 97444433 3555420 01344579999999999999 55554 4565 8888888999999 6799999
Q ss_pred CCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 289 PGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 289 ~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|+|||+|||+..+.+++.|..||+.||.+|.
T Consensus 302 ~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 302 PGVYAIGDAARPPLLAHKAMREGLIAAENAA 332 (464)
T ss_dssp TTEEECGGGTCSSCCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeccCCCcccHHHHHHHHHHHHHHhc
Confidence 9999999999888889999999999999985
No 45
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.92 E-value=3e-24 Score=247.38 Aligned_cols=269 Identities=17% Similarity=0.191 Sum_probs=177.3
Q ss_pred cccccCceeeecceeEeecCCCCccccccCCCC-----CCCHHH------HHHHHHHHH-hcCcEEEeceeecc-----c
Q psy16199 15 IEMSTAKVCLSKDLPDIERPVAALPDSSEIPQY-----RLPFDA------VNFEVELVK-DLGVKIECERSLST-----R 77 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~~~GG~~~~~iP~~-----~~~~~~------v~~~~~~l~-~~gV~i~~~~~v~~-----~ 77 (842)
+|...++...|++|+|||++..-+...+++|.+ ..+.++ +....+.+. +.++++++++.+.. +
T Consensus 18 aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~ 97 (472)
T 3iwa_A 18 AACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAAH 97 (472)
T ss_dssp HHHHHHHHCTTSEEEEECCC-------------------------------------------CEEECSEEEEEEETTTT
T ss_pred HHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEEEECCEEEEEECCCC
Confidence 344445555699999999973223333344432 111222 222333343 58999998887642 2
Q ss_pred cceecc---cc--ccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchH--HHhhcccCCccCCCCCCCCCCCCCcE
Q psy16199 78 DITIEK---LR--KDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLP--RVATSSKKGLCGGCKKESLPILKGTV 150 (842)
Q Consensus 78 ~v~~~~---~~--~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~--~~~~~~~~~~c~~c~~~~~~~~~~kV 150 (842)
.+.+.+ +. .+.||+||||||+. |+.+++| |. +.+++++..+... .+..... ...++++
T Consensus 98 ~v~~~~~~~g~~~~~~~d~lviAtG~~-p~~p~i~-G~-~~~~v~~~~~~~~~~~l~~~l~------------~~~~~~v 162 (472)
T 3iwa_A 98 TVEIENLRTGERRTLKYDKLVLALGSK-ANRPPVE-GM-DLAGVTPVTNLDEAEFVQHAIS------------AGEVSKA 162 (472)
T ss_dssp EEEEEETTTCCEEEEECSEEEECCCEE-ECCCSCT-TT-TSBTEEECCSHHHHHHHHHHCC------------TTSCSEE
T ss_pred EEEEeecCCCCEEEEECCEEEEeCCCC-cCCCCCC-CC-CCCCEEEeCCHHHHHHHHHHhh------------cCCCCEE
Confidence 344433 22 45799999999997 8888888 64 4567665433222 1111100 1234569
Q ss_pred EEEcCChhHHHHHHHHHHc-CCcEEEEEEeecCcccc-CCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEE
Q psy16199 151 IVLGAGDTAFDCATSALRC-GANKVLVVFRKGCTNIR-AVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223 (842)
Q Consensus 151 vVIGgG~~g~e~A~~l~~~-G~~~Vtlv~r~~~~~~~-~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~ 223 (842)
+|||+|++|+|+|..+.+. |.+ |+++++.+. .++ ..+.++ +.+.+.||++++++.++++...++++. +.+
T Consensus 163 vViGgG~~g~e~A~~l~~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~-v~~ 239 (472)
T 3iwa_A 163 VIVGGGFIGLEMAVSLADMWGID-TTVVELADQ-IMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVI 239 (472)
T ss_dssp EEECCSHHHHHHHHHHHHHHCCE-EEEECSSSS-SSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEE
T ss_pred EEECCCHHHHHHHHHHHHhcCCc-EEEEEccCc-ccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEE-EEE
Confidence 9999999999999999999 874 999999874 444 444332 335678999999999999985566665 555
Q ss_pred EeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC----
Q psy16199 224 NRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN---- 299 (842)
Q Consensus 224 ~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~---- 299 (842)
.+ |+ ++++|.||+|+|++ |+..+++.+ |++++++|+|.|| ++++|+.|+|||+|||+.
T Consensus 240 ~~-------------g~--~i~aD~Vv~a~G~~-p~~~l~~~~-gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~ 301 (472)
T 3iwa_A 240 TD-------------KR--TLDADLVILAAGVS-PNTQLARDA-GLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNL 301 (472)
T ss_dssp ES-------------SC--EEECSEEEECSCEE-ECCHHHHHH-TCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBT
T ss_pred eC-------------CC--EEEcCEEEECCCCC-cCHHHHHhC-CccCCCCCCEEEC-CCcccCCCCEEEeccceecccc
Confidence 43 22 78999999999999 666788777 8999999999999 689999999999999973
Q ss_pred ---C---chhHHHHHHHHHHHHHHHH
Q psy16199 300 ---L---SDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 300 ---~---~~~~~~A~~~G~~aA~~I~ 319 (842)
. +.++..|..||+.||.+|.
T Consensus 302 ~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 302 VTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp TTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred cCCceeecchHHHHHHHHHHHHHHhc
Confidence 2 2467899999999999985
No 46
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.92 E-value=1.9e-25 Score=250.25 Aligned_cols=272 Identities=15% Similarity=0.157 Sum_probs=190.6
Q ss_pred eeeecceeEeecC-CCCcc---ccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceeccccccCCCEE
Q psy16199 22 VCLSKDLPDIERP-VAALP---DSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIEKLRKDGYTAI 92 (842)
Q Consensus 22 ~~~g~~V~l~Ek~-~~GG~---~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~l 92 (842)
...+++|+|||++ .++.. +...++....+.++..+..+++++.+|++++++.|.. +.++++++..+.||+|
T Consensus 29 ~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~l 108 (385)
T 3klj_A 29 LGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKL 108 (385)
T ss_dssp TTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEE
T ss_pred hCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEE
Confidence 3468999999997 44421 1111222223334444556778889999999976532 4466666667789999
Q ss_pred EEccCCCCCCCCCCCCCCccccCceehhcchHH--HhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcC
Q psy16199 93 FIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPR--VATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCG 170 (842)
Q Consensus 93 VlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~--~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G 170 (842)
|||||++ |+.+++| |.. ++++..++-.. +... ....++|+|||||++|+|+|..|.+.|
T Consensus 109 vlAtG~~-p~~p~i~-G~~---~v~~~~~~~d~~~l~~~--------------l~~~~~vvVIGgG~~g~E~A~~l~~~g 169 (385)
T 3klj_A 109 IIASGSI-ANKIKVP-HAD---EIFSLYSYDDALKIKDE--------------CKNKGKAFIIGGGILGIELAQAIIDSG 169 (385)
T ss_dssp EECCCEE-ECCCCCT-TCS---CEECCSSHHHHHHHHHH--------------HHHHSCEEEECCSHHHHHHHHHHHHHT
T ss_pred EEecCCC-cCCCCCC-CCC---CeEEeCCHHHHHHHHHH--------------hhcCCeEEEECCCHHHHHHHHHHHhCC
Confidence 9999997 8888888 643 66653322211 1110 011356999999999999999999999
Q ss_pred CcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEE
Q psy16199 171 ANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLK 245 (842)
Q Consensus 171 ~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~ 245 (842)
.+ ||++++.+.......++++ +.+.+.||++++++.++++ + .+++
T Consensus 170 ~~-Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i--------------g---------------~~~~ 219 (385)
T 3klj_A 170 TP-ASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM--------------G---------------DLIR 219 (385)
T ss_dssp CC-EEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC--------------H---------------HHHH
T ss_pred Ce-EEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc--------------C---------------eEEe
Confidence 75 9999998753322233332 3355679999999888665 1 1578
Q ss_pred CCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC----CchhHHHHHHHHHHHHHHHHHH
Q psy16199 246 ANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN----LSDTTVESVNDGKTAAWHIHKY 321 (842)
Q Consensus 246 ~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~----~~~~~~~A~~~G~~aA~~I~~~ 321 (842)
+|.||+++|++ |+.++++.+ |++.+ +| +.|| ++++|+.|+|||+|||+. .+.++..|..||+.||.+|..
T Consensus 220 ~D~vv~a~G~~-p~~~~~~~~-gl~~~-~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g- 293 (385)
T 3klj_A 220 SSCVITAVGVK-PNLDFIKDT-EIASK-RG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG- 293 (385)
T ss_dssp HSEEEECCCEE-ECCGGGTTS-CCCBS-SS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT-
T ss_pred cCeEEECcCcc-cChhhhhhc-CCCcC-CC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC-
Confidence 99999999999 677888876 78876 45 9999 789999999999999985 256789999999999999852
Q ss_pred HHhcCCCCCCCCCCCCceeeccccccceeeecccc
Q psy16199 322 IQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLK 356 (842)
Q Consensus 322 L~~~~~~~~~~~~~~p~~~t~i~~~~L~~~~~G~~ 356 (842)
. ..++ ....|++|+. +.++.+...|..
T Consensus 294 ---~-~~~~--~~~~~~~~~~--~~~~~~~~~G~~ 320 (385)
T 3klj_A 294 ---E-DASY--SEIIPSPILK--VSGISIISCGDI 320 (385)
T ss_dssp ---C-CCCC--CCCCCCCEEE--ETTEEEEEESCC
T ss_pred ---C-CcCC--CCCCCcEEEE--eCCCcEEEEcCC
Confidence 1 1222 2235777763 345666666654
No 47
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.92 E-value=1.2e-24 Score=250.88 Aligned_cols=222 Identities=22% Similarity=0.226 Sum_probs=166.0
Q ss_pred HHHHhcCcEEEeceeecc--cc--ceeccc--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccC
Q psy16199 59 ELVKDLGVKIECERSLST--RD--ITIEKL--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKK 132 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~~--~~--v~~~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~ 132 (842)
..+++.+++++.++.+.. .. +..+++ ..+.||+||||||+. |+.+|.+ + .+...++++.+++..
T Consensus 107 ~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~~~~~~-~-~~~~~v~~~~~~~~~------- 176 (476)
T 3lad_A 107 SLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSK-PVEIPPA-P-VDQDVIVDSTGALDF------- 176 (476)
T ss_dssp HHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEE-ECCCTTS-C-CCSSSEEEHHHHTSC-------
T ss_pred HHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCC-CCCCCCC-C-CCcccEEechhhhcc-------
Confidence 345667999998875431 22 222233 356799999999998 6666555 3 244567776554431
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCC
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMS 207 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~ 207 (842)
...+++|+|||+|++|+|+|..|.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++++.
T Consensus 177 -----------~~~~~~v~ViGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~ 243 (476)
T 3lad_A 177 -----------QNVPGKLGVIGAGVIGLELGSVWARLGAE-VTVLEAMDK-FLPAVDEQVAKEAQKILTKQGLKILLGAR 243 (476)
T ss_dssp -----------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSSS-SSTTSCHHHHHHHHHHHHHTTEEEEETCE
T ss_pred -----------ccCCCeEEEECCCHHHHHHHHHHHHcCCc-EEEEecCCC-cCcccCHHHHHHHHHHHHhCCCEEEECCE
Confidence 23456699999999999999999999875 999999874 455444433 335677999999999
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCCeeeCCCCCC
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGYPEVNYTTMA 285 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~i~vd~~~~~ 285 (842)
++++...++.+. +.+.+. +| ..++++|.||+|+|++ |+.+ + ++.+ |++++++|+|.|| ++++
T Consensus 244 v~~i~~~~~~~~-v~~~~~-----------~g-~~~~~~D~vi~a~G~~-p~~~~l~~~~~-g~~~~~~G~i~vd-~~~~ 307 (476)
T 3lad_A 244 VTGTEVKNKQVT-VKFVDA-----------EG-EKSQAFDKLIVAVGRR-PVTTDLLAADS-GVTLDERGFIYVD-DYCA 307 (476)
T ss_dssp EEEEEECSSCEE-EEEESS-----------SE-EEEEEESEEEECSCEE-ECCTTCCSSCC-SCCBCTTSCBCCC-TTSB
T ss_pred EEEEEEcCCEEE-EEEEeC-----------CC-cEEEECCEEEEeeCCc-ccCCCCCcccc-CccccCCCCEeeC-CCcc
Confidence 999975444443 555532 12 3579999999999999 4544 3 4555 8999999999999 6899
Q ss_pred CCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 286 TSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 286 Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|+.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 308 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 341 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIA 341 (476)
T ss_dssp CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhc
Confidence 9999999999999888899999999999999986
No 48
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.92 E-value=8.5e-25 Score=251.39 Aligned_cols=222 Identities=16% Similarity=0.148 Sum_probs=167.3
Q ss_pred HHHHHhcCcEEEeceeecc--cccee--ccc--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhccc
Q psy16199 58 VELVKDLGVKIECERSLST--RDITI--EKL--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~--~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
.+.+++.||+++.++.+.. ..+++ +++ ..+.||+||+|||+. |+.++++ |+.. . ++++.+++..
T Consensus 98 ~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~-~~~~~~~-g~~~-~-~~~~~~~~~~------ 167 (464)
T 2a8x_A 98 HFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSS-TRLVPGT-SLSA-N-VVTYEEQILS------ 167 (464)
T ss_dssp HHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEE-ECCCTTC-CCBT-T-EECHHHHHTC------
T ss_pred HHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCC-CCCCCCC-CCCc-e-EEecHHHhhc------
Confidence 4556778999998886431 22223 333 456799999999998 7777777 5432 2 6665544321
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFM 206 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~ 206 (842)
...+++|+|||||++|+|+|..|.+.|. +||++++.+. .++..+.++ +.+.+.||++++++
T Consensus 168 ------------~~~~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~gv~i~~~~ 233 (464)
T 2a8x_A 168 ------------RELPKSIIIAGAGAIGMEFGYVLKNYGV-DVTIVEFLPR-ALPNEDADVSKEIEKQFKKLGVTILTAT 233 (464)
T ss_dssp ------------SSCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS-SSTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred ------------cccCCeEEEECCcHHHHHHHHHHHHcCC-eEEEEEcCCc-cccccCHHHHHHHHHHHHHcCCEEEeCc
Confidence 2235679999999999999999999997 4999999874 455554433 34567899999999
Q ss_pred CceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCC
Q psy16199 207 SPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTM 284 (842)
Q Consensus 207 ~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~ 284 (842)
.++++..+++.+. +.+.+ +|+..++++|.||+|+|++ |+.++ ++.+ |++++++|+|.|| +++
T Consensus 234 ~v~~i~~~~~~~~-v~~~~------------~g~~~~~~~D~vv~a~G~~-p~~~~l~~~~~-gl~~~~~G~i~vd-~~~ 297 (464)
T 2a8x_A 234 KVESIADGGSQVT-VTVTK------------DGVAQELKAEKVLQAIGFA-PNVEGYGLDKA-GVALTDRKAIGVD-DYM 297 (464)
T ss_dssp EEEEEEECSSCEE-EEEES------------SSCEEEEEESEEEECSCEE-ECCSSSCHHHH-TCCBCTTSSBCCC-TTS
T ss_pred EEEEEEEcCCeEE-EEEEc------------CCceEEEEcCEEEECCCCC-ccCCCCCchhc-CCccCCCCCEeEC-cCC
Confidence 9999974443332 44431 2344579999999999999 56665 6666 8999988999999 679
Q ss_pred CCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 285 ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 285 ~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|+.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 298 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 298 RTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp BCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhc
Confidence 99999999999999878889999999999999985
No 49
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.92 E-value=6.1e-25 Score=254.42 Aligned_cols=223 Identities=21% Similarity=0.203 Sum_probs=163.7
Q ss_pred HHHHhcCcEEEeceeecc--cccee--ccc--cccCCCEEEEccCCCCCCCCCCCCCCc---cccCceehhcchHHHhhc
Q psy16199 59 ELVKDLGVKIECERSLST--RDITI--EKL--RKDGYTAIFIGIGKPNANVIPIFQGLT---EEMGFYTSKTFLPRVATS 129 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~~--~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~---~~~gv~~~~~~l~~~~~~ 129 (842)
..+++.+++++.++.... ..+.+ +++ ..+.||+||||||+. |+ ++| |+. +...++++.+.+.
T Consensus 123 ~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~-p~--~ip-g~~~~~~~~~~~~~~~~~~----- 193 (491)
T 3urh_A 123 FLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSD-VA--GIP-GVEVAFDEKTIVSSTGALA----- 193 (491)
T ss_dssp HHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEE-CC--CBT-TBCCCCCSSSEECHHHHTS-----
T ss_pred HHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCC-CC--CCC-CcccccCCeeEEehhHhhh-----
Confidence 445677999988875431 22222 222 345799999999998 43 344 543 2234555433332
Q ss_pred ccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEec
Q psy16199 130 SKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLP 204 (842)
Q Consensus 130 ~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~ 204 (842)
....+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++
T Consensus 194 -------------~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~gV~v~~ 258 (491)
T 3urh_A 194 -------------LEKVPASMIVVGGGVIGLELGSVWARLGAK-VTVVEFLDT-ILGGMDGEVAKQLQRMLTKQGIDFKL 258 (491)
T ss_dssp -------------CSSCCSEEEEECCSHHHHHHHHHHHHHTCE-EEEECSSSS-SSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred -------------hhhcCCeEEEECCCHHHHHHHHHHHHcCCE-EEEEecccc-ccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 133456799999999999999999999974 999998874 444444432 335567999999
Q ss_pred CCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCC
Q psy16199 205 FMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYT 282 (842)
Q Consensus 205 ~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~ 282 (842)
++.++++...++.+ .+.+.+.. +|+..++++|.||+|+|++ |+..+ ++.. |++++++|+|.|| +
T Consensus 259 ~~~v~~i~~~~~~~-~v~~~~~~----------~g~~~~i~~D~Vi~a~G~~-p~~~~l~l~~~-g~~~~~~G~i~vd-~ 324 (491)
T 3urh_A 259 GAKVTGAVKSGDGA-KVTFEPVK----------GGEATTLDAEVVLIATGRK-PSTDGLGLAKA-GVVLDSRGRVEID-R 324 (491)
T ss_dssp SEEEEEEEEETTEE-EEEEEETT----------SCCCEEEEESEEEECCCCE-ECCTTSCHHHH-TCCBCTTSCBCCC-T
T ss_pred CCeEEEEEEeCCEE-EEEEEecC----------CCceEEEEcCEEEEeeCCc-cCCCccCchhc-CceECCCCCEeEC-C
Confidence 99999997444433 36665421 2444689999999999999 56554 5666 8999999999999 6
Q ss_pred CCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 283 TMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 283 ~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+++|+.|+|||+|||++.+.++..|..||+.||.+|.
T Consensus 325 ~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 361 (491)
T 3urh_A 325 HFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIA 361 (491)
T ss_dssp TCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHc
Confidence 8999999999999999888899999999999999985
No 50
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.92 E-value=1.9e-24 Score=239.86 Aligned_cols=262 Identities=15% Similarity=0.188 Sum_probs=190.3
Q ss_pred eecceeEeecC-CCCccccc--------cCCCCC--CCHHHHHHHHHHHHhcCcEEEeceeecc-----c---cceeccc
Q psy16199 24 LSKDLPDIERP-VAALPDSS--------EIPQYR--LPFDAVNFEVELVKDLGVKIECERSLST-----R---DITIEKL 84 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~--------~iP~~~--~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~---~v~~~~~ 84 (842)
.|++|+|+|+. .+||.+.. ..|.+. .+.++.++..+++++.++++++++.|.. . .++.+++
T Consensus 36 ~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g 115 (360)
T 3ab1_A 36 NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG 115 (360)
T ss_dssp TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS
T ss_pred CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC
Confidence 48999999996 88987642 223222 2357777888888899999998876532 1 1333334
Q ss_pred cccCCCEEEEccCCC--CCCCCCCCCC-CccccC--ceehhcchHHHhhcccCCccCCCCCCCCCC-CCCcEEEEcCChh
Q psy16199 85 RKDGYTAIFIGIGKP--NANVIPIFQG-LTEEMG--FYTSKTFLPRVATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDT 158 (842)
Q Consensus 85 ~~~~yd~lVlAtGs~--~~~~~~i~~G-~~~~~g--v~~~~~~l~~~~~~~~~~~c~~c~~~~~~~-~~~kVvVIGgG~~ 158 (842)
..+.||+||+|||+. .|+.+++| | +....+ +++. + ++. .. ..++|+|||+|++
T Consensus 116 ~~~~~~~li~AtG~~~~~~~~~~i~-g~~~~~~~~~v~~~---~--------------~~~---~~~~~~~vvVvG~G~~ 174 (360)
T 3ab1_A 116 NVYRSRAVLIAAGLGAFEPRKLPQL-GNIDHLTGSSVYYA---V--------------KSV---EDFKGKRVVIVGGGDS 174 (360)
T ss_dssp CEEEEEEEEECCTTCSCCBCCCGGG-CCCTTTBTTTEESS---C--------------SCG---GGGTTCEEEEECSSHH
T ss_pred cEEEeeEEEEccCCCcCCCCCCCCC-CchhhCcCceEEEe---c--------------CCH---HHcCCCcEEEECCCHH
Confidence 456799999999995 25666666 4 333222 2211 0 011 11 2345999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCe
Q psy16199 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEW 234 (842)
Q Consensus 159 g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~ 234 (842)
|+|+|..|.+.|. +|+++++++. +...+... +.+.+.||++++++.++++..+++++.+|.+...
T Consensus 175 g~e~A~~l~~~g~-~V~lv~~~~~--~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~-------- 243 (360)
T 3ab1_A 175 ALDWTVGLIKNAA-SVTLVHRGHE--FQGHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSS-------- 243 (360)
T ss_dssp HHHHHHHTTTTSS-EEEEECSSSS--CSSCSHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEET--------
T ss_pred HHHHHHHHHhcCC-EEEEEEcCCC--CCCCHHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEec--------
Confidence 9999999999886 5999999863 22222222 2345678999999999999865677777777521
Q ss_pred eccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC---CchhHHHHHHHH
Q psy16199 235 VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN---LSDTTVESVNDG 311 (842)
Q Consensus 235 ~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~---~~~~~~~A~~~G 311 (842)
+|+..++++|.||+++|++ |+.++++.+ |++++ +|++.|| ++++|+.|+|||+|||+. .+.++..|+.||
T Consensus 244 ---~g~~~~i~~D~vi~a~G~~-p~~~~l~~~-~~~~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g 316 (360)
T 3ab1_A 244 ---DGSKWTVEADRLLILIGFK-SNLGPLARW-DLELY-ENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEA 316 (360)
T ss_dssp ---TCCEEEEECSEEEECCCBC-CSCGGGGGS-SCCEE-TTEEECC-TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHH
T ss_pred ---CCCeEEEeCCEEEECCCCC-CCHHHHHhh-ccccc-cCeeeec-CCCcCCCCCEEEecCccCCCCccceeehhHHHH
Confidence 3445689999999999999 676777776 78877 6899999 589999999999999974 357889999999
Q ss_pred HHHHHHHHHHHHh
Q psy16199 312 KTAAWHIHKYIQE 324 (842)
Q Consensus 312 ~~aA~~I~~~L~~ 324 (842)
+.||.+|.++|.+
T Consensus 317 ~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 317 TMAVRHSLSYIKP 329 (360)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHhhcCC
Confidence 9999999999865
No 51
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.92 E-value=2.4e-25 Score=256.02 Aligned_cols=224 Identities=15% Similarity=0.147 Sum_probs=165.8
Q ss_pred HHHHhcCcEEEeceeecc----ccceeccccc--cCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccC
Q psy16199 59 ELVKDLGVKIECERSLST----RDITIEKLRK--DGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKK 132 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~~----~~v~~~~~~~--~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~ 132 (842)
..+++.+++++.++.... ..+..+++.. +.||+||||||+. |+.+++| |+. +++++.+++.....
T Consensus 97 ~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~-p~~p~i~-G~~---~~~t~~~~~~~~~~---- 167 (466)
T 3l8k_A 97 NMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAE-TAKLRLP-GVE---YCLTSDDIFGYKTS---- 167 (466)
T ss_dssp HHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEE-ECCCCCT-TGG---GSBCHHHHHSTTCS----
T ss_pred HHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCC-ccCCCCC-Ccc---ceEeHHHHHHHHHH----
Confidence 344567899988864321 1233334445 6799999999997 8888888 643 67777666531100
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCC-HHHHHH-HHh-cCcEEecCCCce
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAV-PEEVQL-AWE-EKCEFLPFMSPV 209 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~-~~~~~~-~~~-~gV~i~~~~~v~ 209 (842)
....+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++.. ++++.. +.+ ..|++++++.++
T Consensus 168 ----------l~~~~~~vvViGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~d~~~~~~l~~~l~v~i~~~~~v~ 235 (466)
T 3l8k_A 168 ----------FRKLPQDMVIIGAGYIGLEIASIFRLMGVQ-THIIEMLDR-ALITLEDQDIVNTLLSILKLNIKFNSPVT 235 (466)
T ss_dssp ----------CCSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SCTTSCCHHHHHHHHHHHCCCEECSCCEE
T ss_pred ----------HhhCCCeEEEECCCHHHHHHHHHHHHcCCE-EEEEEeCCc-CCCCCCCHHHHHHHHhcCEEEEEECCEEE
Confidence 123456699999999999999999999974 999999874 44444 444433 322 249999999999
Q ss_pred EEEccC-CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH-HhhcCCcccCCCCCeeeCCCCCCCC
Q psy16199 210 QVDVKD-NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV-LEAIKPVKLDKYGYPEVNYTTMATS 287 (842)
Q Consensus 210 ~v~~~~-~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l-~~~l~gl~~~~~G~i~vd~~~~~Ts 287 (842)
++...+ +++. +.+.+ .+|+..++++|.||+|+|++ |+..+ ++.+ |++++++| |.|| ++++|+
T Consensus 236 ~i~~~~~~~v~-v~~~~-----------~~G~~~~i~~D~vi~a~G~~-p~~~l~l~~~-gl~~~~~G-i~vd-~~~~t~ 299 (466)
T 3l8k_A 236 EVKKIKDDEYE-VIYST-----------KDGSKKSIFTNSVVLAAGRR-PVIPEGAREI-GLSISKTG-IVVD-ETMKTN 299 (466)
T ss_dssp EEEEEETTEEE-EEECC-----------TTSCCEEEEESCEEECCCEE-ECCCTTTGGG-TCCBCSSS-BCCC-TTCBCS
T ss_pred EEEEcCCCcEE-EEEEe-----------cCCceEEEEcCEEEECcCCC-cccccchhhc-CceeCCCC-EeEC-CCccCC
Confidence 997533 4443 54432 02444679999999999999 55555 5666 89999999 9999 799999
Q ss_pred CCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 288 VPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 288 ~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 300 ~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 331 (466)
T 3l8k_A 300 IPNVFATGDANGLAPYYHAAVRMSIAAANNIM 331 (466)
T ss_dssp STTEEECGGGTCSCCSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCccHhHHHHHHHHHHHHHh
Confidence 99999999999888899999999999999986
No 52
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.92 E-value=1.7e-24 Score=251.13 Aligned_cols=221 Identities=15% Similarity=0.221 Sum_probs=167.5
Q ss_pred HHHHHHhcCcEEEeceeec--c------cc--ceecccc--ccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchH
Q psy16199 57 EVELVKDLGVKIECERSLS--T------RD--ITIEKLR--KDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLP 124 (842)
Q Consensus 57 ~~~~l~~~gV~i~~~~~v~--~------~~--v~~~~~~--~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~ 124 (842)
..+++++.||+++.++... . .. +..+++. .+.||+||||||+. |+.+++| |+ +..+++++.+++.
T Consensus 101 ~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~-p~~p~i~-g~-~~~~v~~~~~~~~ 177 (499)
T 1xdi_A 101 ITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGAS-PRILPSA-QP-DGERILTWRQLYD 177 (499)
T ss_dssp HHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEE-ECCCGGG-CC-CSSSEEEGGGGGG
T ss_pred HHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCC-CCCCCCC-CC-CcCcEEehhHhhh
Confidence 3566778899999887532 1 11 2222333 46799999999998 7777787 54 4456777665543
Q ss_pred HHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcC
Q psy16199 125 RVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEK 199 (842)
Q Consensus 125 ~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~g 199 (842)
. ...+++++|||+|++|+|+|..+.+.|.+ ||++++.+. .++..++++ +.+.+.|
T Consensus 178 ~------------------~~~~~~vvViGgG~ig~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~G 237 (499)
T 1xdi_A 178 L------------------DALPDHLIVVGSGVTGAEFVDAYTELGVP-VTVVASQDH-VLPYEDADAALVLEESFAERG 237 (499)
T ss_dssp C------------------SSCCSSEEEESCSHHHHHHHHHHHHTTCC-EEEECSSSS-SSCCSSHHHHHHHHHHHHHTT
T ss_pred h------------------hccCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEEcCCc-cccccCHHHHHHHHHHHHHCC
Confidence 1 23356699999999999999999999975 999999874 445444433 3356789
Q ss_pred cEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCe
Q psy16199 200 CEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYP 277 (842)
Q Consensus 200 V~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i 277 (842)
|++++++.++++..+++++. +++. +| .++++|.||+|+|++ |+.++ ++.+ |++++++|+|
T Consensus 238 V~i~~~~~V~~i~~~~~~v~-v~~~-------------~g--~~i~aD~Vv~a~G~~-p~~~~l~l~~~-gl~~~~~G~i 299 (499)
T 1xdi_A 238 VRLFKNARAASVTRTGAGVL-VTMT-------------DG--RTVEGSHALMTIGSV-PNTSGLGLERV-GIQLGRGNYL 299 (499)
T ss_dssp CEEETTCCEEEEEECSSSEE-EEET-------------TS--CEEEESEEEECCCEE-ECCSSSCTTTT-TCCCBTTTBC
T ss_pred CEEEeCCEEEEEEEeCCEEE-EEEC-------------CC--cEEEcCEEEECCCCC-cCCCcCCchhc-CceECCCCCE
Confidence 99999999999975444432 3321 12 368999999999999 66666 5666 8999989999
Q ss_pred eeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 278 EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 278 ~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
.|| ++++|+.|+|||+|||+..+..+..|..||+.||.+|.
T Consensus 300 ~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 300 TVD-RVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp CCC-SSSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHT
T ss_pred EEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhc
Confidence 999 67999999999999999887888999999999999985
No 53
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.92 E-value=3.7e-24 Score=252.23 Aligned_cols=269 Identities=13% Similarity=0.179 Sum_probs=187.9
Q ss_pred cccccCceeeecceeEeecCCCCccccccCCCC-----CCCHH-HHHHHHHHHHhcCcEEEeceeecc-----ccceecc
Q psy16199 15 IEMSTAKVCLSKDLPDIERPVAALPDSSEIPQY-----RLPFD-AVNFEVELVKDLGVKIECERSLST-----RDITIEK 83 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~~~GG~~~~~iP~~-----~~~~~-~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~ 83 (842)
+|...++...|++|+|||+...-+...+++|.+ ..+.+ +..+...+.++.++++++++.|.. +.+++.+
T Consensus 16 aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~ 95 (565)
T 3ntd_A 16 AAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRR 95 (565)
T ss_dssp HHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEEe
Confidence 344445555699999999973333433333321 12222 223334445568999999887742 3344432
Q ss_pred ---c--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHH--HhhcccCCccCCCCCCCCCCCCCcEEEEcCC
Q psy16199 84 ---L--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPR--VATSSKKGLCGGCKKESLPILKGTVIVLGAG 156 (842)
Q Consensus 84 ---~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~--~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG 156 (842)
+ ..+.||+||||||+. |+.+++| |. +..++++..++... +.... ....+++|+|||||
T Consensus 96 ~~~g~~~~~~~d~lviAtG~~-p~~p~ip-G~-~~~~v~~~~~~~~~~~l~~~~------------~~~~~~~vvViGgG 160 (565)
T 3ntd_A 96 LLDGSEYQESYDTLLLSPGAA-PIVPPIP-GV-DNPLTHSLRNIPDMDRILQTI------------QMNNVEHATVVGGG 160 (565)
T ss_dssp TTTCCEEEEECSEEEECCCEE-ECCCCCT-TC-CSTTEECCSSHHHHHHHHHHH------------HHTTCSEEEEECCS
T ss_pred cCCCCeEEEECCEEEECCCCC-CCCCCCC-CC-CCCCEEEeCCHHHHHHHHHHH------------hhCCCCEEEEECCC
Confidence 2 245799999999997 8888888 64 45667665443221 11100 01234569999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEcc-----------------
Q psy16199 157 DTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVK----------------- 214 (842)
Q Consensus 157 ~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~----------------- 214 (842)
++|+|+|..|.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++++.++++...
T Consensus 161 ~~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 238 (565)
T 3ntd_A 161 FIGLEMMESLHHLGIK-TTLLELADQ-VMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQ 238 (565)
T ss_dssp HHHHHHHHHHHHTTCE-EEEEESSSS-SCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTC
T ss_pred HHHHHHHHHHHhcCCc-EEEEEcCCc-cchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccc
Confidence 9999999999999975 999999874 455544432 3456789999999999999741
Q ss_pred --CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeE
Q psy16199 215 --DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVF 292 (842)
Q Consensus 215 --~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVf 292 (842)
++++. +++. +|+ +++||.||+|+|++ |+..+++.+ |++++++|+|.|| ++++|+.|+||
T Consensus 239 ~~~~~~~-v~~~-------------~g~--~i~~D~vi~a~G~~-p~~~l~~~~-g~~~~~~g~i~vd-~~~~t~~~~Iy 299 (565)
T 3ntd_A 239 HIKGHLS-LTLS-------------NGE--LLETDLLIMAIGVR-PETQLARDA-GLAIGELGGIKVN-AMMQTSDPAIY 299 (565)
T ss_dssp CTTCEEE-EEET-------------TSC--EEEESEEEECSCEE-ECCHHHHHH-TCCBCTTSSBCCC-TTCBCSSTTEE
T ss_pred cCCCcEE-EEEc-------------CCC--EEEcCEEEECcCCc-cchHHHHhC-CcccCCCCCEEEC-CCcccCCCCEE
Confidence 23322 2221 232 78999999999999 676787777 8999999999999 68999999999
Q ss_pred EeccCCC-------C---chhHHHHHHHHHHHHHHHH
Q psy16199 293 CGGDTAN-------L---SDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 293 a~GD~~~-------~---~~~~~~A~~~G~~aA~~I~ 319 (842)
|+|||+. . +.+++.|..||+.||.+|.
T Consensus 300 A~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 300 AVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp ECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred EeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 9999973 2 2468899999999999985
No 54
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.92 E-value=1.7e-24 Score=247.99 Aligned_cols=266 Identities=15% Similarity=0.193 Sum_probs=186.2
Q ss_pred ccccCceeeecceeEeecC-CCCccccccCCCC-----C--CCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceec
Q psy16199 16 EMSTAKVCLSKDLPDIERP-VAALPDSSEIPQY-----R--LPFDAVNFEVELVKDLGVKIECERSLST-----RDITIE 82 (842)
Q Consensus 16 ~~~~~~~~~g~~V~l~Ek~-~~GG~~~~~iP~~-----~--~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~ 82 (842)
|...++...|++|+|+|++ .++ ...+++|.+ . .+.++.....+++++.|+++++++.+.. +.+.+.
T Consensus 16 A~~l~~~~~g~~V~lie~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~ 94 (452)
T 2cdu_A 16 VKQTIADHPDADVTAYEMNDNIS-FLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQVTNVDPETKTIKVK 94 (452)
T ss_dssp HHHHHHHCTTCEEEEEESSSCCC-BCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEE
T ss_pred HHHHHhhCcCCcEEEEECCCCCC-cccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEE
Confidence 3344444459999999997 444 333333211 1 1233333334567788999988875531 334443
Q ss_pred c-----ccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCCh
Q psy16199 83 K-----LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGD 157 (842)
Q Consensus 83 ~-----~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~ 157 (842)
+ ...+.||+||||||++ |+.+++| |. +.+++++..++........ ....+++|+|||+|+
T Consensus 95 ~~~~g~~~~~~~d~lviAtGs~-p~~p~i~-g~-~~~~v~~~~~~~~~~~~~~------------~~~~~~~vvViGgG~ 159 (452)
T 2cdu_A 95 DLITNEEKTEAYDKLIMTTGSK-PTVPPIP-GI-DSSRVYLCKNYNDAKKLFE------------EAPKAKTITIIGSGY 159 (452)
T ss_dssp ETTTCCEEEEECSEEEECCCEE-ECCCCCT-TT-TSTTEEECSSHHHHHHHHH------------HGGGCSEEEEECCSH
T ss_pred ecCCCceEEEECCEEEEccCCC-cCCCCCC-CC-CCCCEEEeCcHHHHHHHHH------------HhccCCeEEEECcCH
Confidence 2 3456799999999998 8888887 64 4467776543322111100 022346699999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEEeecCcccc-CCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCC
Q psy16199 158 TAFDCATSALRCGANKVLVVFRKGCTNIR-AVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEK 231 (842)
Q Consensus 158 ~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~-~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~ 231 (842)
+|+|+|..|.+.|. +||++++.+. .++ ..+.++ +.+.+.||++++++.++++...++++..+.+
T Consensus 160 ~g~E~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-------- 229 (452)
T 2cdu_A 160 IGAELAEAYSNQNY-NVNLIDGHER-VLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-------- 229 (452)
T ss_dssp HHHHHHHHHHTTTC-EEEEEESSSS-TTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET--------
T ss_pred HHHHHHHHHHhcCC-EEEEEEcCCc-hhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe--------
Confidence 99999999999987 4999999874 344 343332 3356789999999999999743555543332
Q ss_pred CCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC----------c
Q psy16199 232 GEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL----------S 301 (842)
Q Consensus 232 G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~----------~ 301 (842)
+| .++++|.||+|+|++ |+..+++.. ++++++|+|.|| ++++|+.|+|||+|||+.. +
T Consensus 230 ------~g--~~i~~D~vv~a~G~~-p~~~ll~~~--l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~ 297 (452)
T 2cdu_A 230 ------DG--KEIKSDIAILCIGFR-PNTELLKGK--VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYI 297 (452)
T ss_dssp ------TS--CEEEESEEEECCCEE-ECCGGGTTT--SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECC
T ss_pred ------CC--CEEECCEEEECcCCC-CCHHHHHHh--hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeec
Confidence 12 268999999999999 666777654 778888999999 6899999999999999863 2
Q ss_pred hhHHHHHHHHHHHHHHHH
Q psy16199 302 DTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 302 ~~~~~A~~~G~~aA~~I~ 319 (842)
.++..|..||+.||.+|.
T Consensus 298 ~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 298 PLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp CCHHHHHHHHHHHHHTSS
T ss_pred chHHHHHHHHHHHHHHhC
Confidence 578999999999999985
No 55
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.92 E-value=6.3e-25 Score=252.70 Aligned_cols=217 Identities=21% Similarity=0.274 Sum_probs=162.2
Q ss_pred HHHHhc-CcEEEeceee--cccccee--ccc--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhccc
Q psy16199 59 ELVKDL-GVKIECERSL--STRDITI--EKL--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 59 ~~l~~~-gV~i~~~~~v--~~~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
+.+++. ||+++.++.. +...+++ +++ ..+.||+||||||++ |+.+++| |+ +..+++++.+++..
T Consensus 102 ~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~-p~~p~i~-G~-~~~~~~~~~~~~~~------ 172 (467)
T 1zk7_A 102 GILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGAS-PAVPPIP-GL-KESPYWTSTEALAS------ 172 (467)
T ss_dssp HHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEE-ECCCCCT-TT-TTSCCBCHHHHHHC------
T ss_pred HHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCC-CCCCCCC-CC-CcCceecHHHHhcc------
Confidence 445566 9999887642 2122323 333 446799999999998 8888887 65 33456666554431
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFM 206 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~ 206 (842)
...+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++ .+.++ +.+.+.||++++++
T Consensus 173 ------------~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~~~-~l~-~~~~~~~~l~~~l~~~Gv~i~~~~ 237 (467)
T 1zk7_A 173 ------------DTIPERLAVIGSSVVALELAQAFARLGSK-VTVLARNTL-FFR-EDPAIGEAVTAAFRAEGIEVLEHT 237 (467)
T ss_dssp ------------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCT-TTT-SCHHHHHHHHHHHHHTTCEEETTC
T ss_pred ------------cccCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEEECCc-cCC-CCHHHHHHHHHHHHhCCCEEEcCC
Confidence 23356799999999999999999999975 999999874 455 43332 33567899999999
Q ss_pred CceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCC
Q psy16199 207 SPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTM 284 (842)
Q Consensus 207 ~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~ 284 (842)
.++++..+ +....|.+. + .++++|.||+|+|.+ |+..+ ++.+ |++++++|+|.|| +++
T Consensus 238 ~v~~i~~~-~~~~~v~~~--------------~--~~i~aD~Vv~a~G~~-p~~~~l~l~~~-gl~~~~~G~i~vd-~~~ 297 (467)
T 1zk7_A 238 QASQVAHM-DGEFVLTTT--------------H--GELRADKLLVATGRT-PNTRSLALDAA-GVTVNAQGAIVID-QGM 297 (467)
T ss_dssp CEEEEEEE-TTEEEEEET--------------T--EEEEESEEEECSCEE-ESCTTSCGGGG-TCCBCTTSCBCCC-TTC
T ss_pred EEEEEEEe-CCEEEEEEC--------------C--cEEEcCEEEECCCCC-cCCCcCCchhc-CCcCCCCCCEEEC-CCc
Confidence 99999743 333333322 1 368999999999999 55543 4555 8899889999999 689
Q ss_pred CCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 285 ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 285 ~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|+.|+|||+|||+..+..+..|..||+.||.+|.
T Consensus 298 ~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 298 RTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMT 332 (467)
T ss_dssp BCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHc
Confidence 99999999999999888889999999999999985
No 56
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.92 E-value=1e-24 Score=251.80 Aligned_cols=225 Identities=16% Similarity=0.132 Sum_probs=166.2
Q ss_pred HHHHHhcCcEEEeceeecc--ccce--eccc--cc------cCCCEEEEccCCCCCCCCCCCCCCcccc--Cceehhcch
Q psy16199 58 VELVKDLGVKIECERSLST--RDIT--IEKL--RK------DGYTAIFIGIGKPNANVIPIFQGLTEEM--GFYTSKTFL 123 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~--~~v~--~~~~--~~------~~yd~lVlAtGs~~~~~~~i~~G~~~~~--gv~~~~~~l 123 (842)
.+.+++.||+++.++.+.. ..++ ..++ .. +.||+||+|||++ |+. +| |+. .. .++++.+++
T Consensus 103 ~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~-p~~--~~-g~~-~~~~~v~~~~~~~ 177 (478)
T 1v59_A 103 ELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSE-VTP--FP-GIE-IDEEKIVSSTGAL 177 (478)
T ss_dssp HHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEE-ECC--CT-TCC-CCSSSEECHHHHT
T ss_pred HHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCC-CCC--CC-CCC-CCCceEEcHHHHH
Confidence 3456678999999886531 1222 2333 34 6799999999998 543 33 432 22 366655444
Q ss_pred HHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhc
Q psy16199 124 PRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEE 198 (842)
Q Consensus 124 ~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~ 198 (842)
.. ...+++|+|||||++|+|+|..|.+.|. +||++++.+. .++..+.++ +.+.+.
T Consensus 178 ~~------------------~~~~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~ 237 (478)
T 1v59_A 178 SL------------------KEIPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQ-IGASMDGEVAKATQKFLKKQ 237 (478)
T ss_dssp TC------------------SSCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS-SSSSSCHHHHHHHHHHHHHT
T ss_pred hh------------------hccCceEEEECCCHHHHHHHHHHHHcCC-EEEEEEeCCc-cccccCHHHHHHHHHHHHHC
Confidence 21 2245679999999999999999999997 5999999874 455444432 345678
Q ss_pred CcEEecCCCceEEEcc-CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh--HHhhcCCcccCCCC
Q psy16199 199 KCEFLPFMSPVQVDVK-DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND--VLEAIKPVKLDKYG 275 (842)
Q Consensus 199 gV~i~~~~~v~~v~~~-~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~--l~~~l~gl~~~~~G 275 (842)
||++++++.++++... ++....+++.+.. +|+..++++|.||+|+|++ |+.+ +++.+ |++++++|
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~----------~g~~~~~~~D~vv~a~G~~-p~~~~l~l~~~-g~~~~~~G 305 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTK----------TNKQENLEAEVLLVAVGRR-PYIAGLGAEKI-GLEVDKRG 305 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETT----------TTEEEEEEESEEEECSCEE-ECCTTSCTTTT-TCCBCTTS
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcC----------CCCceEEECCEEEECCCCC-cCCCCCCchhc-CceeCCCC
Confidence 9999999999999741 4444446655310 2334579999999999999 5655 56666 89999899
Q ss_pred CeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHH
Q psy16199 276 YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHK 320 (842)
Q Consensus 276 ~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~ 320 (842)
+|.|| ++++|+.|+|||+|||+..+..++.|..||+.||.+|..
T Consensus 306 ~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 306 RLVID-DQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CBCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CEeEC-cCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 99999 679999999999999998888899999999999999974
No 57
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.92 E-value=5.5e-25 Score=250.79 Aligned_cols=261 Identities=14% Similarity=0.161 Sum_probs=177.8
Q ss_pred cccccCceeeecceeEeecC-CCCccccccCCCC-----CCCHH-HHHHHHHHHHhcCcEEEeceeecc-----ccceec
Q psy16199 15 IEMSTAKVCLSKDLPDIERP-VAALPDSSEIPQY-----RLPFD-AVNFEVELVKDLGVKIECERSLST-----RDITIE 82 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~-~~GG~~~~~iP~~-----~~~~~-~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~ 82 (842)
+|.+.++.....+|+|+|++ ..++ .++++|.+ ..... +.....+++++.++++++++.+.. +.+++.
T Consensus 15 aA~~l~~~g~~~~V~lie~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~ 93 (437)
T 4eqs_A 15 CASQIRRLDKESDIIIFEKDRDMSF-ANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVL 93 (437)
T ss_dssp HHHHHHHHCSSSCEEEEESSSCSSB-CGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEEEEETTTTEEEEE
T ss_pred HHHHHHhCCCCCcEEEEeCCCCCCC-CcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEEEEEccCcEEEEE
Confidence 45555565556789999997 3332 22233211 11111 111223556778999999876532 222222
Q ss_pred -----cccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhc--chHHHhhcccCCccCCCCCCCCCCCCCcEEEEcC
Q psy16199 83 -----KLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKT--FLPRVATSSKKGLCGGCKKESLPILKGTVIVLGA 155 (842)
Q Consensus 83 -----~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~--~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGg 155 (842)
+.....||+||||||++ |+.++++ | .++++... ....+..... ...+++++||||
T Consensus 94 ~~~~~~~~~~~yd~lVIATGs~-p~~p~i~-g----~~~~~~~~~~~~~~l~~~~~------------~~~~~~vvViGg 155 (437)
T 4eqs_A 94 NRKTNEQFEESYDKLILSPGAS-ANSLGFE-S----DITFTLRNLEDTDAIDQFIK------------ANQVDKVLVVGA 155 (437)
T ss_dssp ETTTTEEEEEECSEEEECCCEE-ECCCCCC-C----TTEECCSSHHHHHHHHHHHH------------HHTCCEEEEECC
T ss_pred eccCCceEEEEcCEEEECCCCc-ccccccc-C----ceEEeeccHHHHHHHHHhhh------------ccCCcEEEEECC
Confidence 12235699999999998 8877777 4 22332211 1111111000 112456999999
Q ss_pred ChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHH-----HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccC
Q psy16199 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPE-----EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNE 230 (842)
Q Consensus 156 G~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~-----~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~ 230 (842)
|++|+|+|..+.+.|.+ ||++++.++ .++..++ ..+.+.++||++++++.++++.. .. +.+.+
T Consensus 156 G~ig~E~A~~l~~~g~~-Vtlv~~~~~-ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~~---v~~~~----- 223 (437)
T 4eqs_A 156 GYVSLEVLENLYERGLH-PTLIHRSDK-INKLMDADMNQPILDELDKREIPYRLNEEINAING--NE---ITFKS----- 223 (437)
T ss_dssp SHHHHHHHHHHHHHTCE-EEEEESSSC-CSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEET--TE---EEETT-----
T ss_pred ccchhhhHHHHHhcCCc-ceeeeeecc-ccccccchhHHHHHHHhhccceEEEeccEEEEecC--Ce---eeecC-----
Confidence 99999999999999975 999999874 4444433 23456678999999999998862 22 33332
Q ss_pred CCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC----------
Q psy16199 231 KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL---------- 300 (842)
Q Consensus 231 ~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~---------- 300 (842)
| +++++|.|++|+|++ |++++++.. |++++++|+|.|| ++++||+|+|||+|||+..
T Consensus 224 --------g--~~~~~D~vl~a~G~~-Pn~~~~~~~-gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~ 290 (437)
T 4eqs_A 224 --------G--KVEHYDMIIEGVGTH-PNSKFIESS-NIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPAS 290 (437)
T ss_dssp --------S--CEEECSEEEECCCEE-ESCGGGTTS-SCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEEC
T ss_pred --------C--eEEeeeeEEEEecee-cCcHHHHhh-hhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCcccc
Confidence 2 268999999999999 677788776 8999999999999 6899999999999999753
Q ss_pred chhHHHHHHHHHHHHHHHH
Q psy16199 301 SDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 301 ~~~~~~A~~~G~~aA~~I~ 319 (842)
+..++.|..||+.||.+|.
T Consensus 291 ~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 291 VPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHc
Confidence 2468899999999999985
No 58
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.4e-24 Score=250.50 Aligned_cols=219 Identities=16% Similarity=0.156 Sum_probs=164.4
Q ss_pred HHHHhcCcEEEeceeec--ccccee--cccc--ccCCCEEEEccCCCCCCCC-CCCCCCccccCceehhcchHHHhhccc
Q psy16199 59 ELVKDLGVKIECERSLS--TRDITI--EKLR--KDGYTAIFIGIGKPNANVI-PIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~--~~~v~~--~~~~--~~~yd~lVlAtGs~~~~~~-~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
+.+++.|++++.++... ...+.+ +++. .+.||+||||||+. |+.+ ++| |. +.++++.+++..
T Consensus 113 ~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~-p~~p~~i~-g~---~~~~~~~~~~~l------ 181 (479)
T 2hqm_A 113 KNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGK-AIFPENIP-GF---ELGTDSDGFFRL------ 181 (479)
T ss_dssp HHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEE-ECCCTTST-TG---GGSBCHHHHHHC------
T ss_pred HHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCC-CCCCCCCC-Cc---ccccchHHHhcc------
Confidence 44567899999887432 122333 2333 46799999999998 7777 787 54 234555554431
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFM 206 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~ 206 (842)
...+++++|||||++|+|+|..|.+.|.+ ||++++.+. .++..++++ +.+.+.||++++++
T Consensus 182 ------------~~~~~~vvViGgG~ig~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~Gv~i~~~~ 247 (479)
T 2hqm_A 182 ------------EEQPKKVVVVGAGYIGIELAGVFHGLGSE-THLVIRGET-VLRKFDECIQNTITDHYVKEGINVHKLS 247 (479)
T ss_dssp ------------SSCCSEEEEECSSHHHHHHHHHHHHTTCE-EEEECSSSS-SCTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred ------------cccCCeEEEECCCHHHHHHHHHHHHcCCc-eEEEEeCCc-cccccCHHHHHHHHHHHHhCCeEEEeCC
Confidence 23456799999999999999999999975 999999874 445554432 33567899999999
Q ss_pred CceEEEccC-CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH-HhhcCCcccCCCCCeeeCCCCC
Q psy16199 207 SPVQVDVKD-NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV-LEAIKPVKLDKYGYPEVNYTTM 284 (842)
Q Consensus 207 ~v~~v~~~~-~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l-~~~l~gl~~~~~G~i~vd~~~~ 284 (842)
.++++...+ +++..|++. +|+ .++++|.||+|+|++ |+..| ++.+ |++++++|+|.|| +++
T Consensus 248 ~v~~i~~~~~~~~~~v~~~-------------~G~-~~i~~D~vv~a~G~~-p~~~l~l~~~-gl~~~~~G~i~vd-~~~ 310 (479)
T 2hqm_A 248 KIVKVEKNVETDKLKIHMN-------------DSK-SIDDVDELIWTIGRK-SHLGMGSENV-GIKLNSHDQIIAD-EYQ 310 (479)
T ss_dssp CEEEEEECC-CCCEEEEET-------------TSC-EEEEESEEEECSCEE-ECCCSSGGGG-TCCBCTTSCBCCC-TTC
T ss_pred EEEEEEEcCCCcEEEEEEC-------------CCc-EEEEcCEEEECCCCC-CccccChhhc-CceECCCCCEeEC-CCC
Confidence 999997432 223334443 232 479999999999999 55566 5666 8999999999999 678
Q ss_pred CCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 285 ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 285 ~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|+.|+|||+|||+..+..+..|..||+.||.+|.
T Consensus 311 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 345 (479)
T 2hqm_A 311 NTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLF 345 (479)
T ss_dssp BCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhc
Confidence 99999999999998877889999999999999986
No 59
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.92 E-value=4.2e-24 Score=245.44 Aligned_cols=217 Identities=18% Similarity=0.177 Sum_probs=163.6
Q ss_pred HHHHhcCcEEEeceee--ccccceeccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccC
Q psy16199 59 ELVKDLGVKIECERSL--STRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCG 136 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v--~~~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~ 136 (842)
+.+++.||+++.++.. +.+.+++ ++..+.||+||||||++ |+.+++| |. ..++++.+++..
T Consensus 100 ~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~-p~~p~i~-G~---~~~~~~~~~~~~----------- 162 (463)
T 2r9z_A 100 GYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGR-PIVPRLP-GA---ELGITSDGFFAL----------- 162 (463)
T ss_dssp HHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEE-ECCCSCT-TG---GGSBCHHHHHHC-----------
T ss_pred HHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCC-CCCCCCC-Cc---cceecHHHHhhh-----------
Confidence 3446789999988753 2244555 33456799999999998 7777787 54 235555554431
Q ss_pred CCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEE
Q psy16199 137 GCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQV 211 (842)
Q Consensus 137 ~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v 211 (842)
...+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++++.++++
T Consensus 163 -------~~~~~~vvVvGgG~~g~e~A~~l~~~G~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i 233 (463)
T 2r9z_A 163 -------QQQPKRVAIIGAGYIGIELAGLLRSFGSE-VTVVALEDR-LLFQFDPLLSATLAENMHAQGIETHLEFAVAAL 233 (463)
T ss_dssp -------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEE
T ss_pred -------hccCCEEEEECCCHHHHHHHHHHHhcCCE-EEEEEcCCc-cccccCHHHHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 22356799999999999999999999974 999999874 344443332 3456789999999999999
Q ss_pred EccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCCeeeCCCCCCCCCC
Q psy16199 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGYPEVNYTTMATSVP 289 (842)
Q Consensus 212 ~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~i~vd~~~~~Ts~~ 289 (842)
...++. ..|++. +|+. ++++|.||+|+|++ |+.+ + ++.+ |++++++|+|.|| ++++|+.|
T Consensus 234 ~~~~~~-~~v~~~-------------~G~~-~i~~D~vv~a~G~~-p~~~~l~~~~~-g~~~~~~G~i~vd-~~~~t~~~ 295 (463)
T 2r9z_A 234 ERDAQG-TTLVAQ-------------DGTR-LEGFDSVIWAVGRA-PNTRDLGLEAA-GIEVQSNGMVPTD-AYQNTNVP 295 (463)
T ss_dssp EEETTE-EEEEET-------------TCCE-EEEESEEEECSCEE-ESCTTSCHHHH-TCCCCTTSCCCCC-TTSBCSST
T ss_pred EEeCCe-EEEEEe-------------CCcE-EEEcCEEEECCCCC-cCCCCCCchhc-CCccCCCCCEeEC-CCCccCCC
Confidence 743333 234443 2332 68999999999999 5554 4 5666 8999989999999 67899999
Q ss_pred CeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 290 GVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 290 gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|||+|||+..+..+..|..||+.||.+|.
T Consensus 296 ~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 325 (463)
T 2r9z_A 296 GVYALGDITGRDQLTPVAIAAGRRLAERLF 325 (463)
T ss_dssp TEEECGGGGTSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEeecCCCcccHHHHHHHHHHHHHHHc
Confidence 999999998877889999999999999985
No 60
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=2.7e-24 Score=249.49 Aligned_cols=217 Identities=18% Similarity=0.215 Sum_probs=156.9
Q ss_pred HHHHhcCcEEEeceeecc--ccceecc-------------ccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcch
Q psy16199 59 ELVKDLGVKIECERSLST--RDITIEK-------------LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFL 123 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~~--~~v~~~~-------------~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l 123 (842)
+.+++.||+++.++.+.. +.+++.+ ...+.||+||||||++ |+.+++| |+ ..++++.+++
T Consensus 97 ~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~-p~~p~i~-G~---~~~~~~~~~~ 171 (500)
T 1onf_A 97 QNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNK-PVFPPVK-GI---ENTISSDEFF 171 (500)
T ss_dssp HHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCC-BCCCSCT-TG---GGCEEHHHHT
T ss_pred HHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCC-CCCCCCC-CC---CcccCHHHHh
Confidence 445678999999875421 3344433 3456799999999998 7777787 54 2356554443
Q ss_pred HHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhc
Q psy16199 124 PRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEE 198 (842)
Q Consensus 124 ~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~ 198 (842)
.. .. +++|+|||||++|+|+|..|.+.|. +||++++.+. .++..++++ +.+.+.
T Consensus 172 ~~------------------~~-~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~-~l~~~d~~~~~~l~~~l~~~ 230 (500)
T 1onf_A 172 NI------------------KE-SKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGNR-ILRKFDESVINVLENDMKKN 230 (500)
T ss_dssp TC------------------CC-CSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSS-SCTTSCHHHHHHHHHHHHHT
T ss_pred cc------------------CC-CCeEEEECChHHHHHHHHHHHHcCC-eEEEEecCCc-cCcccchhhHHHHHHHHHhC
Confidence 21 22 5679999999999999999999987 4999999874 455554433 345678
Q ss_pred CcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCC
Q psy16199 199 KCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGY 276 (842)
Q Consensus 199 gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~ 276 (842)
||++++++.++++...++....|++. +|+. ++++|.||+|+|++ |+.+ + ++.+ |+++ ++|+
T Consensus 231 gv~i~~~~~v~~i~~~~~~~~~v~~~-------------~g~~-~~~~D~vi~a~G~~-p~~~~l~~~~~-g~~~-~~G~ 293 (500)
T 1onf_A 231 NINIVTFADVVEIKKVSDKNLSIHLS-------------DGRI-YEHFDHVIYCVGRS-PDTENLKLEKL-NVET-NNNY 293 (500)
T ss_dssp TCEEECSCCEEEEEESSTTCEEEEET-------------TSCE-EEEESEEEECCCBC-CTTTTSSCTTT-TCCB-SSSC
T ss_pred CCEEEECCEEEEEEEcCCceEEEEEC-------------CCcE-EEECCEEEECCCCC-cCCCCCCchhc-Cccc-cCCE
Confidence 99999999999997433222234443 2332 48999999999999 5654 5 4665 8888 7899
Q ss_pred eeeCCCCCCCCCCCeEEeccCC----------------------------------CCchhHHHHHHHHHHHHHHHH
Q psy16199 277 PEVNYTTMATSVPGVFCGGDTA----------------------------------NLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 277 i~vd~~~~~Ts~~gVfa~GD~~----------------------------------~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|.|| ++++|+.|+|||+|||+ ..+.++..|..||+.||.+|.
T Consensus 294 i~vd-~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 369 (500)
T 1onf_A 294 IVVD-ENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLF 369 (500)
T ss_dssp EEEC-TTCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEC-CCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHh
Confidence 9999 57899999999999998 345678999999999999986
No 61
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.91 E-value=3.4e-24 Score=247.32 Aligned_cols=222 Identities=19% Similarity=0.199 Sum_probs=164.3
Q ss_pred HHHHhcCcEEEeceeecc----ccceeccccccCCCEEEEccCCCCCCCC---CCCCCCccccCceehhcchHHHhhccc
Q psy16199 59 ELVKDLGVKIECERSLST----RDITIEKLRKDGYTAIFIGIGKPNANVI---PIFQGLTEEMGFYTSKTFLPRVATSSK 131 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~~----~~v~~~~~~~~~yd~lVlAtGs~~~~~~---~i~~G~~~~~gv~~~~~~l~~~~~~~~ 131 (842)
..+++.+|+++.++.... ..+.. +...+.||+||||||+. |+.+ ++| |+. .++++.+++.
T Consensus 116 ~~~~~~gv~~~~g~~~~~~~~~~~v~~-~g~~~~~d~lviAtG~~-p~~p~~~~i~-G~~---~~~~~~~~~~------- 182 (478)
T 3dk9_A 116 NNLTKSHIEIIRGHAAFTSDPKPTIEV-SGKKYTAPHILIATGGM-PSTPHESQIP-GAS---LGITSDGFFQ------- 182 (478)
T ss_dssp HHHHHTTCEEEESCEEECSCSSCEEEE-TTEEEECSCEEECCCEE-ECCCCTTTST-TGG---GSBCHHHHTT-------
T ss_pred HHHHhCCcEEEEeEEEEeeCCeEEEEE-CCEEEEeeEEEEccCCC-CCCCCcCCCC-CCc---eeEchHHhhc-------
Confidence 445667999998875431 12332 23456799999999997 7776 777 532 3444444332
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFM 206 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~ 206 (842)
....+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++++
T Consensus 183 -----------~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~~~-~l~~~d~~~~~~~~~~l~~~gv~i~~~~ 249 (478)
T 3dk9_A 183 -----------LEELPGRSVIVGAGYIAVEMAGILSALGSK-TSLMIRHDK-VLRSFDSMISTNCTEELENAGVEVLKFS 249 (478)
T ss_dssp -----------CCSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SCTTSCHHHHHHHHHHHHHTTCEEETTE
T ss_pred -----------hhhcCccEEEECCCHHHHHHHHHHHHcCCe-EEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEeCC
Confidence 133456799999999999999999999975 999999874 445554432 34567899999999
Q ss_pred CceEEEccCCc-EEEEEEEeecccCCCCeeccCCce--EEEECCEEEEccccCcCChh-H-HhhcCCcccCCCCCeeeCC
Q psy16199 207 SPVQVDVKDNK-IAGMQFNRTEQNEKGEWVEDEEQR--IKLKANYIISAFGSTLLDND-V-LEAIKPVKLDKYGYPEVNY 281 (842)
Q Consensus 207 ~v~~v~~~~~~-v~~V~~~~~~~~~~G~~~~~~g~~--~~i~~D~Vi~a~G~~~~~~~-l-~~~l~gl~~~~~G~i~vd~ 281 (842)
.++++...++. ...+.+.+.. +++. .++++|.||+|+|++ |+.. + ++.+ |++++++|+|.||
T Consensus 250 ~v~~i~~~~~~~~~~v~~~~~~----------~g~~~g~~~~~D~vi~a~G~~-p~~~~l~l~~~-g~~~~~~G~i~vd- 316 (478)
T 3dk9_A 250 QVKEVKKTLSGLEVSMVTAVPG----------RLPVMTMIPDVDCLLWAIGRV-PNTKDLSLNKL-GIQTDDKGHIIVD- 316 (478)
T ss_dssp EEEEEEECSSSEEEEEEECCTT----------SCCEEEEEEEESEEEECSCEE-ESCTTSCGGGG-TCCBCTTCCBCCC-
T ss_pred EEEEEEEcCCCcEEEEEEccCC----------CCcccceEEEcCEEEEeeccc-cCCCCCCchhc-CCeeCCCCCEeeC-
Confidence 99999743333 2234444310 1222 579999999999999 4554 4 5666 8999999999999
Q ss_pred CCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 282 TTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 282 ~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
++++|+.|+|||+|||++.+..+..|..||+.||.+|.
T Consensus 317 ~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 354 (478)
T 3dk9_A 317 EFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLF 354 (478)
T ss_dssp TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHc
Confidence 68899999999999999888899999999999999986
No 62
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.91 E-value=2.8e-24 Score=250.67 Aligned_cols=220 Identities=14% Similarity=0.223 Sum_probs=166.4
Q ss_pred HhcCcEEE-ecee--eccccceeccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCC
Q psy16199 62 KDLGVKIE-CERS--LSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGC 138 (842)
Q Consensus 62 ~~~gV~i~-~~~~--v~~~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c 138 (842)
++.+++++ .++. ++.+.+.++ ...+.||+||||||+. |+.+++| |. +..+++++.+++..+
T Consensus 146 ~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~-p~~p~i~-G~-~~~~v~~~~~~~~~l------------ 209 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAG-PGTLDVP-GV-NAKGVFDHATLVEEL------------ 209 (523)
T ss_dssp HTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEE-CCCCCST-TT-TSBTEEEHHHHHHHC------------
T ss_pred ccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCC-CCCCCCC-Cc-ccCcEeeHHHHHHHH------------
Confidence 67899998 4432 221334443 3456799999999998 8888887 64 446788876665221
Q ss_pred CCCCCCCCC-CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEE
Q psy16199 139 KKESLPILK-GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVD 212 (842)
Q Consensus 139 ~~~~~~~~~-~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~ 212 (842)
...+ ++++|||||++|+|+|..+.+.|.+ ||++++.+. .++..+.++ +.+.+.||++++++.++++.
T Consensus 210 -----~~~~g~~vvViGgG~~g~E~A~~l~~~G~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 282 (523)
T 1mo9_A 210 -----DYEPGSTVVVVGGSKTAVEYGCFFNATGRR-TVMLVRTEP-LKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIE 282 (523)
T ss_dssp -----CSCCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCT-TTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEE
T ss_pred -----HhcCCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEEecCc-ccccccHHHHHHHHHHHHhCCcEEEECCEEEEEE
Confidence 2234 5699999999999999999999975 999999874 455444432 34567899999999999997
Q ss_pred cc-CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChh-HHhhcCCcccCCCCCeeeCCCCCCCCCCC
Q psy16199 213 VK-DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND-VLEAIKPVKLDKYGYPEVNYTTMATSVPG 290 (842)
Q Consensus 213 ~~-~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~-l~~~l~gl~~~~~G~i~vd~~~~~Ts~~g 290 (842)
.. ++++.++.+... +|+ .+++||.||+|+|++ |+.. +++.+ |++++++|+|.|| ++++|+.|+
T Consensus 283 ~~~~~~v~~~~v~~~-----------~G~-~~i~aD~Vv~A~G~~-p~~~~~l~~~-gl~~~~~G~i~Vd-~~~~t~~~~ 347 (523)
T 1mo9_A 283 EDANGRVQAVVAMTP-----------NGE-MRIETDFVFLGLGEQ-PRSAELAKIL-GLDLGPKGEVLVN-EYLQTSVPN 347 (523)
T ss_dssp ECTTSBEEEEEEEET-----------TEE-EEEECSCEEECCCCE-ECCHHHHHHH-TCCBCTTSCBCCC-TTSBCSSTT
T ss_pred EcCCCceEEEEEEEC-----------CCc-EEEEcCEEEECcCCc-cCCccCHHHc-CCccCCCCCEEEC-CCCccCCCC
Confidence 43 444432222210 222 379999999999999 6666 67777 8999989999999 689999999
Q ss_pred eEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 291 VFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 291 Vfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|||+|||+..+..+..|..||+.||.+|.
T Consensus 348 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 348 VYAVGDLIGGPMEMFKARKSGCYAARNVM 376 (523)
T ss_dssp EEECGGGGCSSCSHHHHHHHHHHHHHHHT
T ss_pred EEEEeecCCCcccHHHHHHHHHHHHHHHc
Confidence 99999999877889999999999999985
No 63
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.91 E-value=1.1e-24 Score=251.80 Aligned_cols=221 Identities=16% Similarity=0.204 Sum_probs=164.2
Q ss_pred HHHHhcCcEEEeceeecc--ccceec--cc------------cccCCCEEEEccCCCCCCCCC-CCCCCccccCceehhc
Q psy16199 59 ELVKDLGVKIECERSLST--RDITIE--KL------------RKDGYTAIFIGIGKPNANVIP-IFQGLTEEMGFYTSKT 121 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~~--~~v~~~--~~------------~~~~yd~lVlAtGs~~~~~~~-i~~G~~~~~gv~~~~~ 121 (842)
+.+++.|++++.++.+.. +.+.+. ++ ..+.||+||+|||++ |+.++ ++ . + ..++++.+
T Consensus 103 ~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~-p~~~~~i~-~--~-~~v~~~~~ 177 (482)
T 1ojt_A 103 GMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR-VTKLPFIP-E--D-PRIIDSSG 177 (482)
T ss_dssp HHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE-ECCCSSCC-C--C-TTEECHHH
T ss_pred HHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCC-CCCCCCCC-c--c-CcEEcHHH
Confidence 455678999998875421 233332 23 356799999999998 76666 44 2 2 24666555
Q ss_pred chHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHH
Q psy16199 122 FLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAW 196 (842)
Q Consensus 122 ~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~ 196 (842)
++.. ...+++++|||||++|+|+|..|.+.|.+ ||++++.+. .++..++++ +.+.
T Consensus 178 ~~~~------------------~~~~~~vvViGgG~ig~E~A~~l~~~G~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~ 237 (482)
T 1ojt_A 178 ALAL------------------KEVPGKLLIIGGGIIGLEMGTVYSTLGSR-LDVVEMMDG-LMQGADRDLVKVWQKQNE 237 (482)
T ss_dssp HTTC------------------CCCCSEEEEESCSHHHHHHHHHHHHHTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHG
T ss_pred Hhcc------------------cccCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEEECCc-cccccCHHHHHHHHHHHH
Confidence 4431 22356799999999999999999999974 999999874 455554433 3356
Q ss_pred hcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCC
Q psy16199 197 EEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKY 274 (842)
Q Consensus 197 ~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~ 274 (842)
++||++++++.++++...++ ...+++.+. ++ +| .++++|.||+|+|++ |+.++ ++.+ |++++++
T Consensus 238 ~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~----~~-----~g--~~~~~D~vv~a~G~~-p~~~~l~~~~~-gl~~~~~ 303 (482)
T 1ojt_A 238 YRFDNIMVNTKTVAVEPKED-GVYVTFEGA----NA-----PK--EPQRYDAVLVAAGRA-PNGKLISAEKA-GVAVTDR 303 (482)
T ss_dssp GGEEEEECSCEEEEEEEETT-EEEEEEESS----SC-----CS--SCEEESCEEECCCEE-ECGGGTTGGGT-TCCCCTT
T ss_pred hcCCEEEECCEEEEEEEcCC-eEEEEEecc----CC-----Cc--eEEEcCEEEECcCCC-cCCCCCChhhc-CceeCCC
Confidence 78999999999999974333 334555431 00 12 257899999999999 67766 5666 8999988
Q ss_pred CCeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 275 G~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|+|.|| ++++|+.|+|||+|||+..+.+++.|..||+.||.+|.
T Consensus 304 G~i~vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 347 (482)
T 1ojt_A 304 GFIEVD-KQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCA 347 (482)
T ss_dssp SCCCCC-TTSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHT
T ss_pred CCEeeC-CCcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHc
Confidence 999999 58999999999999999888889999999999999986
No 64
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.91 E-value=3.8e-24 Score=246.97 Aligned_cols=267 Identities=16% Similarity=0.199 Sum_probs=185.5
Q ss_pred ccccCceeeecceeEeecCCCCccccccCCC-----CCCCHHHHHHHHHHH-HhcCcEEEeceeecc-----ccceecc-
Q psy16199 16 EMSTAKVCLSKDLPDIERPVAALPDSSEIPQ-----YRLPFDAVNFEVELV-KDLGVKIECERSLST-----RDITIEK- 83 (842)
Q Consensus 16 ~~~~~~~~~g~~V~l~Ek~~~GG~~~~~iP~-----~~~~~~~v~~~~~~l-~~~gV~i~~~~~v~~-----~~v~~~~- 83 (842)
|...++...|++|+|+|++...+...+++|. ...+.++..+..+.+ +..|+++++++.+.. +.+.+.+
T Consensus 52 A~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~ 131 (480)
T 3cgb_A 52 AMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHT 131 (480)
T ss_dssp HHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEET
T ss_pred HHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEc
Confidence 3333443458999999997433333333331 112334444344555 455999999876531 2344432
Q ss_pred --cc--ccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHH--HhhcccCCccCCCCCCCCCCCCCcEEEEcCCh
Q psy16199 84 --LR--KDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPR--VATSSKKGLCGGCKKESLPILKGTVIVLGAGD 157 (842)
Q Consensus 84 --~~--~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~--~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~ 157 (842)
+. .+.||+||||||++ |+.+++| |. +.+++++..++... +..... ...+++|+|||||+
T Consensus 132 ~~g~~~~~~~d~lviAtG~~-p~~p~i~-G~-~~~~v~~~~~~~~~~~l~~~~~------------~~~~~~vvViGgG~ 196 (480)
T 3cgb_A 132 KTKDVFEFSYDRLLIATGVR-PVMPEWE-GR-DLQGVHLLKTIPDAERILKTLE------------TNKVEDVTIIGGGA 196 (480)
T ss_dssp TTCCEEEEECSEEEECCCEE-ECCCCCB-TT-TSBTEECCSSHHHHHHHHHHHH------------SSCCCEEEEECCHH
T ss_pred CCCceEEEEcCEEEECCCCc-ccCCCCC-Cc-cCCCEEEeCCHHHHHHHHHHhh------------hcCCCeEEEECCCH
Confidence 33 46799999999998 8888888 64 44677654322221 111000 11345699999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCC
Q psy16199 158 TAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKG 232 (842)
Q Consensus 158 ~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G 232 (842)
+|+|+|..|.+.|.+ |+++++.+. .++..+.++ +.+.+.||++++++.++++.. ++++..+.+.
T Consensus 197 ~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~v~~v~~~-------- 265 (480)
T 3cgb_A 197 IGLEMAETFVELGKK-VRMIERNDH-IGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKG-NERVEAVETD-------- 265 (480)
T ss_dssp HHHHHHHHHHHTTCE-EEEECCGGG-TTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSBEEEEEET--------
T ss_pred HHHHHHHHHHhcCCe-EEEEEeCCc-hhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEc-CCcEEEEEEC--------
Confidence 999999999999874 999999874 344443332 345678999999999999973 4555444331
Q ss_pred CeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC----------ch
Q psy16199 233 EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL----------SD 302 (842)
Q Consensus 233 ~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~----------~~ 302 (842)
+ .++++|.||+|+|++ |+.++++.+ |++++++|+|.|| ++++|+.|+|||+|||+.. +.
T Consensus 266 ------~--~~i~~D~vi~a~G~~-p~~~~l~~~-g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~ 334 (480)
T 3cgb_A 266 ------K--GTYKADLVLVSVGVK-PNTDFLEGT-NIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIP 334 (480)
T ss_dssp ------T--EEEECSEEEECSCEE-ESCGGGTTS-CCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCC
T ss_pred ------C--CEEEcCEEEECcCCC-cChHHHHhC-CcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecc
Confidence 1 268999999999999 666777776 8999989999999 6899999999999999842 14
Q ss_pred hHHHHHHHHHHHHHHHH
Q psy16199 303 TTVESVNDGKTAAWHIH 319 (842)
Q Consensus 303 ~~~~A~~~G~~aA~~I~ 319 (842)
++..|..||+.||.+|.
T Consensus 335 ~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 335 IGTTANKQGRLAGLNML 351 (480)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhc
Confidence 68899999999999985
No 65
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.91 E-value=8.4e-24 Score=227.27 Aligned_cols=254 Identities=13% Similarity=0.116 Sum_probs=185.4
Q ss_pred eecceeEeecCCCCcccc---ccCCCC--CCCHHHHHHHHHHHHhc-CcEEEeceeecc------ccceeccccccCCCE
Q psy16199 24 LSKDLPDIERPVAALPDS---SEIPQY--RLPFDAVNFEVELVKDL-GVKIECERSLST------RDITIEKLRKDGYTA 91 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~~~---~~iP~~--~~~~~~v~~~~~~l~~~-gV~i~~~~~v~~------~~v~~~~~~~~~yd~ 91 (842)
.|++|+|+|+....+... +..|.. ..+.++.++..+++++. +++++.++.... ..++.+++..+.||+
T Consensus 24 ~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~ 103 (297)
T 3fbs_A 24 ARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGR 103 (297)
T ss_dssp TTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCE
Confidence 479999999975444332 233332 34457888888888887 788877654321 134444555567999
Q ss_pred EEEccCCCCCCCCCCCCCCccc--cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHc
Q psy16199 92 IFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRC 169 (842)
Q Consensus 92 lVlAtGs~~~~~~~i~~G~~~~--~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~ 169 (842)
||+|||+. |+.+++| |+... .++++.. +.. . .....++|+|||+|++|+|+|..|.+.
T Consensus 104 vviAtG~~-~~~~~~~-g~~~~~~~~~~~~~-~~~---------------~--~~~~~~~v~vvG~G~~~~e~a~~l~~~ 163 (297)
T 3fbs_A 104 LILAMGVT-DELPEIA-GLRERWGSAVFHCP-YCH---------------G--YELDQGKIGVIAASPMAIHHALMLPDW 163 (297)
T ss_dssp EEECCCCE-EECCCCB-TTGGGBTTTEESCH-HHH---------------T--GGGTTCEEEEECCSTTHHHHHHHGGGT
T ss_pred EEECCCCC-CCCCCCC-CchhhcCCeeEEcc-cCc---------------c--hhhcCCEEEEEecCccHHHHHHHhhhc
Confidence 99999998 7777787 65432 2233221 111 1 011234599999999999999999999
Q ss_pred CCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEE
Q psy16199 170 GANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYI 249 (842)
Q Consensus 170 G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~V 249 (842)
| +|++++++.. ...+...+.+.+.||+++. +.++++.. ++ .|++.+ | .++++|.|
T Consensus 164 g--~v~~v~~~~~---~~~~~~~~~l~~~gv~i~~-~~v~~i~~-~~---~v~~~~-------------g--~~~~~D~v 218 (297)
T 3fbs_A 164 G--ETTFFTNGIV---EPDADQHALLAARGVRVET-TRIREIAG-HA---DVVLAD-------------G--RSIALAGL 218 (297)
T ss_dssp S--EEEEECTTTC---CCCHHHHHHHHHTTCEEEC-SCEEEEET-TE---EEEETT-------------S--CEEEESEE
T ss_pred C--cEEEEECCCC---CCCHHHHHHHHHCCcEEEc-ceeeeeec-CC---eEEeCC-------------C--CEEEEEEE
Confidence 7 5999998763 3344455667789999996 88888863 32 344432 2 26899999
Q ss_pred EEccccCcCChhHHhhcCCcccC--CCC-CeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 250 ISAFGSTLLDNDVLEAIKPVKLD--KYG-YPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 250 i~a~G~~~~~~~l~~~l~gl~~~--~~G-~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|+++|++ |+..+++.+ |++++ ++| ++.+| ++++|+.|+|||+|||+..+.++..|+.||+.||.+|.++|.+.
T Consensus 219 i~a~G~~-p~~~~~~~~-g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 219 FTQPKLR-ITVDWIEKL-GCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp EECCEEE-CCCSCHHHH-TCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEccCcc-cCchhHHhc-CCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 9999999 666788777 78776 457 89999 57999999999999999878899999999999999999999753
No 66
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.91 E-value=7.1e-24 Score=241.27 Aligned_cols=251 Identities=16% Similarity=0.243 Sum_probs=179.1
Q ss_pred HHHHHhcCcEEEeceeecc-----ccceeccccccCCCEEEEccCCCCCCCCCCCCCCccccC---ceehhcch--HHHh
Q psy16199 58 VELVKDLGVKIECERSLST-----RDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMG---FYTSKTFL--PRVA 127 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~g---v~~~~~~l--~~~~ 127 (842)
.+++++.|+++++++.|.. +.++++++..+.||+||+|||++ |+.+++| |. +.++ +++..+.- ..+.
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~-p~~~~i~-G~-~~~~~~~v~~~~~~~d~~~l~ 143 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGR-PRPLPVA-SG-AVGKANNFRYLRTLEDAECIR 143 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECCCGGG-TT-HHHHSTTEEESSSHHHHHHHH
T ss_pred HHHHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCC-ccCCCCC-Cc-ccCCCceEEEECCHHHHHHHH
Confidence 3566788999999876532 33555555566799999999998 8888887 64 3444 55422211 1111
Q ss_pred hcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHH-----HHHHHhcCcEE
Q psy16199 128 TSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEE-----VQLAWEEKCEF 202 (842)
Q Consensus 128 ~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~-----~~~~~~~gV~i 202 (842)
.. ...+++|+|||||++|+|+|..|.+.|. +||++++.+.......+.+ .+.+.+.||++
T Consensus 144 ~~--------------l~~~~~vvViGgG~~g~E~A~~l~~~G~-~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i 208 (431)
T 1q1r_A 144 RQ--------------LIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDI 208 (431)
T ss_dssp HT--------------CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred HH--------------hhcCCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEE
Confidence 11 1224569999999999999999999997 4999999874322223332 23456789999
Q ss_pred ecCCCceEEEc--cCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeC
Q psy16199 203 LPFMSPVQVDV--KDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280 (842)
Q Consensus 203 ~~~~~v~~v~~--~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd 280 (842)
++++.++++.. +++++..|++.+ | .++++|.||+|+|++ |+.++++.+ |++++ +| |.||
T Consensus 209 ~~~~~v~~i~~~~~~~~v~~v~~~~-------------G--~~i~~D~Vv~a~G~~-p~~~l~~~~-gl~~~-~g-i~Vd 269 (431)
T 1q1r_A 209 RTGTQVCGFEMSTDQQKVTAVLCED-------------G--TRLPADLVIAGIGLI-PNCELASAA-GLQVD-NG-IVIN 269 (431)
T ss_dssp ECSCCEEEEEECTTTCCEEEEEETT-------------S--CEEECSEEEECCCEE-ECCHHHHHT-TCCBS-SS-EECC
T ss_pred EeCCEEEEEEeccCCCcEEEEEeCC-------------C--CEEEcCEEEECCCCC-cCcchhhcc-CCCCC-CC-EEEC
Confidence 99999999985 456776666542 2 268999999999999 677788877 88886 45 9999
Q ss_pred CCCCCCCCCCeEEeccCCCCch----------hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCceeecccccccee
Q psy16199 281 YTTMATSVPGVFCGGDTANLSD----------TTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISV 350 (842)
Q Consensus 281 ~~~~~Ts~~gVfa~GD~~~~~~----------~~~~A~~~G~~aA~~I~~~L~~~~~~~~~~~~~~p~~~t~i~~~~L~~ 350 (842)
++++|+.|+|||+|||+..+. ++..|..||+.||.+|.. . ..+ .+..|++|+. +.++.+
T Consensus 270 -~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g----~-~~~---~~~~p~~~~~--~~~~~~ 338 (431)
T 1q1r_A 270 -EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCG----K-VPR---DEAAPWFWSD--QYEIGL 338 (431)
T ss_dssp -TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTT----C-CCC---CCCCCEEEEE--ETTEEE
T ss_pred -CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcC----C-CCC---CCCCCeEEEE--ECCceE
Confidence 689999999999999986432 578999999999999852 1 112 2357888874 345666
Q ss_pred eecccc
Q psy16199 351 EICGLK 356 (842)
Q Consensus 351 ~~~G~~ 356 (842)
...|..
T Consensus 339 ~~~G~~ 344 (431)
T 1q1r_A 339 KMVGLS 344 (431)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 666653
No 67
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.91 E-value=1.8e-24 Score=248.29 Aligned_cols=215 Identities=17% Similarity=0.189 Sum_probs=161.0
Q ss_pred HHHHhcCcEEEeceeec--cccceeccccccCCCEEEEccCCCCCCCCC-CCCCCccccCceehhcchHHHhhcccCCcc
Q psy16199 59 ELVKDLGVKIECERSLS--TRDITIEKLRKDGYTAIFIGIGKPNANVIP-IFQGLTEEMGFYTSKTFLPRVATSSKKGLC 135 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~v~--~~~v~~~~~~~~~yd~lVlAtGs~~~~~~~-i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c 135 (842)
+++++.||+++.++.+. .+.+++++ ..+.||+||||||++ |+.++ +| . + ..++++.+++..
T Consensus 104 ~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~-p~~~~~~~-~--~-~~v~~~~~~~~~---------- 167 (458)
T 1lvl_A 104 ALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSS-SVELPMLP-L--G-GPVISSTEALAP---------- 167 (458)
T ss_dssp HHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEE-ECCBTTBC-C--B-TTEECHHHHTCC----------
T ss_pred HHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCC-CCCCCCCC-c--c-CcEecHHHHhhh----------
Confidence 45677899999987542 13455554 456799999999998 66555 43 2 2 146665544421
Q ss_pred CCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceE
Q psy16199 136 GGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 136 ~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~ 210 (842)
...+++|+|||||++|+|+|..|.+.|.+ ||++++.+. .++..++++ +.+.+.||++++++.+++
T Consensus 168 --------~~~~~~vvViGgG~~g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 168 --------KALPQHLVVVGGGYIGLELGIAYRKLGAQ-VSVVEARER-ILPTYDSELTAPVAESLKKLGIALHLGHSVEG 237 (458)
T ss_dssp --------SSCCSEEEEECCSHHHHHHHHHHHHHTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHHTCEEETTCEEEE
T ss_pred --------hccCCeEEEECcCHHHHHHHHHHHHCCCe-EEEEEcCCc-cccccCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 22356699999999999999999999975 999999874 445444432 335678999999999999
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCCCCCC
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTMATSV 288 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~~Ts~ 288 (842)
+.. ++ +.+.. . +|+..++++|.||+|+|++ |+..+ ++.+ |++++++ +|.|| ++++|+.
T Consensus 238 i~~--~~---v~v~~----~-------~G~~~~i~~D~vv~a~G~~-p~~~~l~~~~~-g~~~~~~-~i~vd-~~~~t~~ 297 (458)
T 1lvl_A 238 YEN--GC---LLAND----G-------KGGQLRLEADRVLVAVGRR-PRTKGFNLECL-DLKMNGA-AIAID-ERCQTSM 297 (458)
T ss_dssp EET--TE---EEEEC----S-------SSCCCEECCSCEEECCCEE-ECCSSSSGGGS-CCCEETT-EECCC-TTCBCSS
T ss_pred EEe--CC---EEEEE----C-------CCceEEEECCEEEECcCCC-cCCCCCCcHhc-CCcccCC-EEeEC-CCCcCCC
Confidence 973 43 22321 1 2333479999999999999 55554 4555 7888877 89999 5799999
Q ss_pred CCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 289 PGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 289 ~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|+|||+|||+..+..+..|..||+.||.+|.
T Consensus 298 ~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 298 HNVWAIGDVAGEPMLAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp TTEEECGGGGCSSCCHHHHHHHHHHHHHHHT
T ss_pred CCEEEeeccCCCcccHHHHHHHHHHHHHHhc
Confidence 9999999999888889999999999999986
No 68
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.91 E-value=2.2e-24 Score=249.60 Aligned_cols=259 Identities=18% Similarity=0.174 Sum_probs=180.4
Q ss_pred ecceeEeecC-CCCccccccCCC-----CCCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceec-c--ccccCCC
Q psy16199 25 SKDLPDIERP-VAALPDSSEIPQ-----YRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIE-K--LRKDGYT 90 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~~iP~-----~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~-~--~~~~~yd 90 (842)
+++|+|+|++ .++ ...+++|. ...+.++.....+++++.|+++++++.+.. +.+++. + ...+.||
T Consensus 61 ~~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d 139 (490)
T 2bc0_A 61 ANEIVVFDQNSNIS-FLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYD 139 (490)
T ss_dssp GSEEEEECSSSCCS-BCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECS
T ss_pred CCeEEEEECCCCCC-ccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECC
Confidence 4999999997 444 33333221 122333332334567788999988875431 335444 2 2346799
Q ss_pred EEEEccCCCCCCCCCCCCCCc------c----ccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHH
Q psy16199 91 AIFIGIGKPNANVIPIFQGLT------E----EMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAF 160 (842)
Q Consensus 91 ~lVlAtGs~~~~~~~i~~G~~------~----~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~ 160 (842)
+||||||++ |+.+++| |+. + .+++++..++......... .....+++|+|||||++|+
T Consensus 140 ~lviAtG~~-p~~p~i~-G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~vvVIGgG~ig~ 207 (490)
T 2bc0_A 140 KLIFATGSQ-PILPPIK-GAEIKEGSLEFEATLENLQFVKLYQNSADVIAK----------LENKDIKRVAVVGAGYIGV 207 (490)
T ss_dssp EEEECCCEE-ECCCSCB-TCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHH----------TTSTTCCEEEEECCSHHHH
T ss_pred EEEECCCCC-cCCCCCC-CccccccccccccccCCEEEeCCHHHHHHHHHH----------hhhcCCceEEEECCCHHHH
Confidence 999999998 8778888 653 0 4567764333221110000 0013355699999999999
Q ss_pred HHHHHHHHcCCcEEEEEEeecCcccc-CCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCe
Q psy16199 161 DCATSALRCGANKVLVVFRKGCTNIR-AVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEW 234 (842)
Q Consensus 161 e~A~~l~~~G~~~Vtlv~r~~~~~~~-~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~ 234 (842)
|+|..|.+.|. +||++++.+. .++ ..+.++ +.+.+.||++++++.++++.. ++++..+.+ +
T Consensus 208 E~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~--------- 274 (490)
T 2bc0_A 208 ELAEAFQRKGK-EVVLIDVVDT-CLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-D--------- 274 (490)
T ss_dssp HHHHHHHHTTC-EEEEEESSSS-TTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-S---------
T ss_pred HHHHHHHHCCC-eEEEEEcccc-hhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-C---------
Confidence 99999999987 5999999874 344 344332 335578999999999999973 555443433 1
Q ss_pred eccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC----------chhH
Q psy16199 235 VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL----------SDTT 304 (842)
Q Consensus 235 ~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~----------~~~~ 304 (842)
| .++++|.||+|+|++ |+.++++.. ++++++|+|.|| ++++|+.|+|||+|||+.. +.++
T Consensus 275 ----g--~~i~~D~Vi~a~G~~-p~~~ll~~~--l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~ 344 (490)
T 2bc0_A 275 ----K--NEYDVDMVILAVGFR-PNTTLGNGK--IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNYIALA 344 (490)
T ss_dssp ----S--CEEECSEEEECCCEE-ECCGGGTTC--SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEECCCCH
T ss_pred ----C--cEEECCEEEECCCCC-cChHHHHhh--hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceeecccH
Confidence 2 268999999999999 676777654 778888999999 6899999999999999863 2578
Q ss_pred HHHHHHHHHHHHHHH
Q psy16199 305 VESVNDGKTAAWHIH 319 (842)
Q Consensus 305 ~~A~~~G~~aA~~I~ 319 (842)
..|..||+.||.+|.
T Consensus 345 ~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 345 SNAVRTGIVAAHNAC 359 (490)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999985
No 69
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.91 E-value=2.6e-24 Score=247.25 Aligned_cols=219 Identities=16% Similarity=0.159 Sum_probs=164.4
Q ss_pred HHHHHHhcCcEEEeceeec--ccccee-ccccccCCCEEEEccCCCCCC-CCCCCCCCccccCceehhcchHHHhhcccC
Q psy16199 57 EVELVKDLGVKIECERSLS--TRDITI-EKLRKDGYTAIFIGIGKPNAN-VIPIFQGLTEEMGFYTSKTFLPRVATSSKK 132 (842)
Q Consensus 57 ~~~~l~~~gV~i~~~~~v~--~~~v~~-~~~~~~~yd~lVlAtGs~~~~-~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~ 132 (842)
....+++.+++++.++... .+.+.+ ++...+.||+||||||+. |+ .+++| |.. .++++.+++..
T Consensus 99 ~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~-p~~~p~i~-G~~---~~~~~~~~~~~------- 166 (463)
T 4dna_A 99 YRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGH-PSPHDALP-GHE---LCITSNEAFDL------- 166 (463)
T ss_dssp HHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEE-ECCCTTST-TGG---GCBCHHHHTTC-------
T ss_pred HHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCC-cccCCCCC-Ccc---ccccHHHHhhh-------
Confidence 3445566799999886432 133444 234456799999999998 77 77777 532 35555444321
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCC
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMS 207 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~ 207 (842)
...+++++|||+|++|+|+|..+.+.|.+ |+++++.+. .++..+.++ +.+.+.||++++++.
T Consensus 167 -----------~~~~~~v~ViGgG~~g~e~A~~l~~~g~~-Vt~v~~~~~-~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 233 (463)
T 4dna_A 167 -----------PALPESILIAGGGYIAVEFANIFHGLGVK-TTLIYRGKE-ILSRFDQDMRRGLHAAMEEKGIRILCEDI 233 (463)
T ss_dssp -----------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred -----------hcCCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEEcCCc-cccccCHHHHHHHHHHHHHCCCEEECCCE
Confidence 23456699999999999999999999874 999999874 345544433 345678999999999
Q ss_pred ceEEEccCCcEEEEE-EEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCC
Q psy16199 208 PVQVDVKDNKIAGMQ-FNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTM 284 (842)
Q Consensus 208 v~~v~~~~~~v~~V~-~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~ 284 (842)
++++...++....|+ +. +| . +++|.||+|+|++ |+..+ ++.+ |++++++|+|.|| +++
T Consensus 234 v~~i~~~~~~~~~v~~~~-------------~g--~-i~aD~Vv~a~G~~-p~~~~l~l~~~-g~~~~~~G~i~vd-~~~ 294 (463)
T 4dna_A 234 IQSVSADADGRRVATTMK-------------HG--E-IVADQVMLALGRM-PNTNGLGLEAA-GVRTNELGAIIVD-AFS 294 (463)
T ss_dssp EEEEEECTTSCEEEEESS-------------SC--E-EEESEEEECSCEE-ESCTTSSTGGG-TCCBCTTSCBCCC-TTC
T ss_pred EEEEEEcCCCEEEEEEcC-------------CC--e-EEeCEEEEeeCcc-cCCCCCCcccc-CceECCCCCEeEC-cCC
Confidence 999975433322343 22 23 2 8999999999999 56554 5666 8999999999999 689
Q ss_pred CCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 285 ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 285 ~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|+.|+|||+|||+..+.++..|..||+.||.+|.
T Consensus 295 ~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 329 (463)
T 4dna_A 295 RTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEY 329 (463)
T ss_dssp BCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 99999999999999888889999999999999985
No 70
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.90 E-value=8.1e-24 Score=239.11 Aligned_cols=242 Identities=17% Similarity=0.231 Sum_probs=173.7
Q ss_pred HHHhcCcEEEeceeecc-----ccceeccccccCCCEEEEccCCCCCCCCCC-CCCCccccCceehhcchH--HHhhccc
Q psy16199 60 LVKDLGVKIECERSLST-----RDITIEKLRKDGYTAIFIGIGKPNANVIPI-FQGLTEEMGFYTSKTFLP--RVATSSK 131 (842)
Q Consensus 60 ~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i-~~G~~~~~gv~~~~~~l~--~~~~~~~ 131 (842)
++++.|+++++++.+.. +.++++++..+.||+||||||++ |+.+++ | |. + +++++..+.-. .+...
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~-~~~~~i~~-G~-~-~~v~~~~~~~~~~~l~~~-- 141 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAA-PRALPTLQ-GA-T-MPVHTLRTLEDARRIQAG-- 141 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECCCGGGT-TC-S-SCEEECCSHHHHHHHHTT--
T ss_pred HHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCC-CCCCCccC-CC-C-CcEEEECCHHHHHHHHHH--
Confidence 45677999999975431 33555555566799999999998 888888 7 64 3 67765322221 11110
Q ss_pred CCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcccc-CCHHH-----HHHHHhcCcEEecC
Q psy16199 132 KGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIR-AVPEE-----VQLAWEEKCEFLPF 205 (842)
Q Consensus 132 ~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~-~~~~~-----~~~~~~~gV~i~~~ 205 (842)
....++|+|||||++|+|+|..|.+.|. +||++++.+. .++ ..+.+ .+.+.+.||+++++
T Consensus 142 ------------~~~~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~GV~i~~~ 207 (408)
T 2gqw_A 142 ------------LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR-LMSRAAPATLADFVARYHAAQGVDLRFE 207 (408)
T ss_dssp ------------CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS-SSTTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred ------------hhcCCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeCCc-ccccccCHHHHHHHHHHHHHcCcEEEeC
Confidence 1224569999999999999999999997 5999999874 343 23333 23456789999999
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCC
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMA 285 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~ 285 (842)
+.++++. ++ .|++.+ | .+++||.||+|+|++ |+.++++.+ |++++ +| |.|| ++++
T Consensus 208 ~~v~~i~--~~---~v~~~~-------------g--~~i~~D~vi~a~G~~-p~~~l~~~~-gl~~~-~g-i~Vd-~~~~ 262 (408)
T 2gqw_A 208 RSVTGSV--DG---VVLLDD-------------G--TRIAADMVVVGIGVL-ANDALARAA-GLACD-DG-IFVD-AYGR 262 (408)
T ss_dssp CCEEEEE--TT---EEEETT-------------S--CEEECSEEEECSCEE-ECCHHHHHH-TCCBS-SS-EECC-TTCB
T ss_pred CEEEEEE--CC---EEEECC-------------C--CEEEcCEEEECcCCC-ccHHHHHhC-CCCCC-CC-EEEC-CCCc
Confidence 9999997 33 344432 2 268999999999999 677788877 88887 46 9999 6899
Q ss_pred CCCCCeEEeccCCCCc----------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCceeeccccccceeeeccc
Q psy16199 286 TSVPGVFCGGDTANLS----------DTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGL 355 (842)
Q Consensus 286 Ts~~gVfa~GD~~~~~----------~~~~~A~~~G~~aA~~I~~~L~~~~~~~~~~~~~~p~~~t~i~~~~L~~~~~G~ 355 (842)
|+.|+|||+|||+..+ .++..|..||+.||.+|... .. . ..+..|++|+. ..++.+...|.
T Consensus 263 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~-----~~-~-~~~~~p~~~~~--~~~~~~~~~G~ 333 (408)
T 2gqw_A 263 TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDP-----TA-P-GYAELPWYWSD--QGALRIQVAGL 333 (408)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCT-----TS-C-CCCCCCEEEEE--ETTEEEEEEEC
T ss_pred cCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCC-----CC-C-cCCCCCeEEEE--ECCceEEEECC
Confidence 9999999999998643 26789999999999999631 11 1 22347888774 34556666665
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.90 E-value=2.3e-24 Score=249.03 Aligned_cols=220 Identities=17% Similarity=0.179 Sum_probs=165.0
Q ss_pred HHHHHHhcCcEEEeceeec--cccceec-cccccCCCEEEEccCCCCCC-CCCCCCCCccccCceehhcchHHHhhcccC
Q psy16199 57 EVELVKDLGVKIECERSLS--TRDITIE-KLRKDGYTAIFIGIGKPNAN-VIPIFQGLTEEMGFYTSKTFLPRVATSSKK 132 (842)
Q Consensus 57 ~~~~l~~~gV~i~~~~~v~--~~~v~~~-~~~~~~yd~lVlAtGs~~~~-~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~ 132 (842)
....+++.+++++.++... ...+.+. +...+.||+||||||+. |. .+++| |. ..++++.+++..
T Consensus 120 ~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~-p~~~p~i~-G~---~~~~~~~~~~~~------- 187 (484)
T 3o0h_A 120 YREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAK-IVSNSAIK-GS---DLCLTSNEIFDL------- 187 (484)
T ss_dssp HHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEE-ECCC--CB-TG---GGSBCTTTGGGC-------
T ss_pred HHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCC-cccCCCCC-Cc---cccccHHHHHhH-------
Confidence 3455667899998886432 1334443 34456799999999998 66 67777 53 234555444431
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCC
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMS 207 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~ 207 (842)
...+++++|||+|++|+|+|..+.+.|.+ |+++++.+. .++..+.++ +.+.+.||++++++.
T Consensus 188 -----------~~~~~~v~ViGgG~~g~e~A~~l~~~g~~-Vtli~~~~~-~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 254 (484)
T 3o0h_A 188 -----------EKLPKSIVIVGGGYIGVEFANIFHGLGVK-TTLLHRGDL-ILRNFDYDLRQLLNDAMVAKGISIIYEAT 254 (484)
T ss_dssp -----------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SSTTSCHHHHHHHHHHHHHHTCEEESSCC
T ss_pred -----------HhcCCcEEEECcCHHHHHHHHHHHHcCCe-EEEEECCCc-cccccCHHHHHHHHHHHHHCCCEEEeCCE
Confidence 23456799999999999999999999975 999998874 445444432 335577999999999
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCCC
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTMA 285 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~~ 285 (842)
++++...++++ .|++.+ | .++++|.||+|+|++ |+..+ ++.+ |++++++|+|.|| ++++
T Consensus 255 V~~i~~~~~~v-~v~~~~-------------g--~~i~aD~Vi~A~G~~-p~~~~l~l~~~-g~~~~~~G~i~vd-~~~~ 315 (484)
T 3o0h_A 255 VSQVQSTENCY-NVVLTN-------------G--QTICADRVMLATGRV-PNTTGLGLERA-GVKVNEFGAVVVD-EKMT 315 (484)
T ss_dssp EEEEEECSSSE-EEEETT-------------S--CEEEESEEEECCCEE-ECCTTCCHHHH-TCCBCTTSCBCCC-TTSB
T ss_pred EEEEEeeCCEE-EEEECC-------------C--cEEEcCEEEEeeCCC-cCCCCCChhhc-CceECCCCCEeEC-CCCC
Confidence 99998555554 354432 2 268999999999999 56554 5566 8999999999999 6899
Q ss_pred CCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHH
Q psy16199 286 TSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHK 320 (842)
Q Consensus 286 Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~ 320 (842)
|+.|+|||+|||+..+.++..|..||+.||.+|..
T Consensus 316 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 316 TNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp CSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcC
Confidence 99999999999998888999999999999999863
No 72
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.90 E-value=4.4e-24 Score=244.31 Aligned_cols=269 Identities=15% Similarity=0.156 Sum_probs=185.4
Q ss_pred cccccCceeeecceeEeecCCCCccccccCCC-----CCCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceecc-
Q psy16199 15 IEMSTAKVCLSKDLPDIERPVAALPDSSEIPQ-----YRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIEK- 83 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~~~GG~~~~~iP~-----~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~- 83 (842)
+|...++...|++|+|+|++...|...+++|. ...+.++..+..+++++.|++++.++.+.. +.+.+.+
T Consensus 15 aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~ 94 (447)
T 1nhp_A 15 AVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDL 94 (447)
T ss_dssp HHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEET
T ss_pred HHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEec
Confidence 34444444569999999997433333343321 112333333344667788999988887631 3354433
Q ss_pred --cc--ccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhH
Q psy16199 84 --LR--KDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA 159 (842)
Q Consensus 84 --~~--~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g 159 (842)
+. .+.||+||||||++ |+.+++| |. +.+++++..++.......... ....+++++|||+|++|
T Consensus 95 ~~g~~~~~~~d~lviAtG~~-p~~p~i~-G~-~~~~v~~~~~~~~~~~l~~~~----------~~~~~~~vvIiG~G~~g 161 (447)
T 1nhp_A 95 VSGEERVENYDKLIISPGAV-PFELDIP-GK-DLDNIYLMRGRQWAIKLKQKT----------VDPEVNNVVVIGSGYIG 161 (447)
T ss_dssp TTCCEEEEECSEEEECCCEE-ECCCCST-TT-TSBSEECCCHHHHHHHHHHHH----------TCTTCCEEEEECCSHHH
T ss_pred CCCceEEEeCCEEEEcCCCC-cCCCCCC-CC-CCCCeEEECCHHHHHHHHHHh----------hhcCCCeEEEECCCHHH
Confidence 32 25799999999998 8888888 64 456777654433221110000 00134569999999999
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCcccc-CCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCC
Q psy16199 160 FDCATSALRCGANKVLVVFRKGCTNIR-AVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGE 233 (842)
Q Consensus 160 ~e~A~~l~~~G~~~Vtlv~r~~~~~~~-~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~ 233 (842)
+|+|..|.+.|. +|+++++.+. .++ ..+.++ +.+.+.||++++++.++++.. ++++..+.+.
T Consensus 162 ~e~A~~l~~~g~-~Vtlv~~~~~-~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~v~~v~~~--------- 229 (447)
T 1nhp_A 162 IEAAEAFAKAGK-KVTVIDILDR-PLGVYLDKEFTDVLTEEMEANNITIATGETVERYEG-DGRVQKVVTD--------- 229 (447)
T ss_dssp HHHHHHHHHTTC-EEEEEESSSS-TTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC-SSBCCEEEES---------
T ss_pred HHHHHHHHHCCC-eEEEEecCcc-cccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEc-cCcEEEEEEC---------
Confidence 999999999987 4999999874 333 233322 335567999999999999974 3444333321
Q ss_pred eeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC----------chh
Q psy16199 234 WVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL----------SDT 303 (842)
Q Consensus 234 ~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~----------~~~ 303 (842)
+ .++++|.||+|+|++ |+..+++.. ++++++|+|.|| ++++|+.|+|||+|||+.. +.+
T Consensus 230 -----~--~~i~~d~vi~a~G~~-p~~~~~~~~--~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~ 298 (447)
T 1nhp_A 230 -----K--NAYDADLVVVAVGVR-PNTAWLKGT--LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIAL 298 (447)
T ss_dssp -----S--CEEECSEEEECSCEE-ESCGGGTTT--SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCC
T ss_pred -----C--CEEECCEEEECcCCC-CChHHHHhh--hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechh
Confidence 2 268999999999999 666676654 777788999999 6899999999999999862 247
Q ss_pred HHHHHHHHHHHHHHHH
Q psy16199 304 TVESVNDGKTAAWHIH 319 (842)
Q Consensus 304 ~~~A~~~G~~aA~~I~ 319 (842)
+..|..||+.||.+|.
T Consensus 299 ~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 299 ATNARKQGRFAVKNLE 314 (447)
T ss_dssp HHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHhhc
Confidence 8999999999999985
No 73
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.90 E-value=1.9e-23 Score=247.35 Aligned_cols=270 Identities=15% Similarity=0.167 Sum_probs=190.0
Q ss_pred cccccCceeeecceeEeecCCCCccccccCCCC-----CCCHH-HHHHHHHHHHhcCcEEEeceeecc-----ccceec-
Q psy16199 15 IEMSTAKVCLSKDLPDIERPVAALPDSSEIPQY-----RLPFD-AVNFEVELVKDLGVKIECERSLST-----RDITIE- 82 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~~~GG~~~~~iP~~-----~~~~~-~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~- 82 (842)
+|.+.++...|++|+|||++..-|...+++|.+ ..+.+ +..+...+.+++++++++++.|.. +.+.+.
T Consensus 51 aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~ 130 (588)
T 3ics_A 51 VAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKN 130 (588)
T ss_dssp HHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEee
Confidence 334444445589999999974334444443321 12222 333445556788999999887642 223332
Q ss_pred --ccc--ccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChh
Q psy16199 83 --KLR--KDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDT 158 (842)
Q Consensus 83 --~~~--~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~ 158 (842)
++. ...||+||||||+. |+.+++| |+.+.+++++..++.......... ....+++|+|||||++
T Consensus 131 ~~~g~~~~~~~d~lviAtG~~-p~~p~i~-G~~~~~~v~~~~~~~~~~~~~~~l----------~~~~~~~vvViGgG~~ 198 (588)
T 3ics_A 131 VTTNETYNEAYDVLILSPGAK-PIVPSIP-GIEEAKALFTLRNVPDTDRIKAYI----------DEKKPRHATVIGGGFI 198 (588)
T ss_dssp TTTCCEEEEECSEEEECCCEE-ECCCCCT-TTTTCTTEEECSSHHHHHHHHHHH----------HHHCCSEEEEECCSHH
T ss_pred cCCCCEEEEeCCEEEECCCCC-CCCCCCC-CcccCCCeEEeCCHHHHHHHHHHH----------hhcCCCeEEEECCCHH
Confidence 222 45699999999997 8888888 654667777765544322110000 0123456999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCC
Q psy16199 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGE 233 (842)
Q Consensus 159 g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~ 233 (842)
|+|+|..|.+.|.+ |+++++.+. .++..+.++ +.+.+.||++++++.++++....+ .|.+.+
T Consensus 199 g~e~A~~l~~~g~~-Vtlv~~~~~-~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~-------- 265 (588)
T 3ics_A 199 GVEMVENLRERGIE-VTLVEMANQ-VMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKS-------- 265 (588)
T ss_dssp HHHHHHHHHHTTCE-EEEECSSSS-SCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETT--------
T ss_pred HHHHHHHHHhCCCe-EEEEecCCc-ccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECC--------
Confidence 99999999999975 999999874 444444432 345678999999999999974323 243332
Q ss_pred eeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC------C----chh
Q psy16199 234 WVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN------L----SDT 303 (842)
Q Consensus 234 ~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~------~----~~~ 303 (842)
| .++++|.||+|+|++ |+..+++.+ |++++++|+|.|| ++++|+.|+|||+|||+. + +.+
T Consensus 266 -----g--~~i~~D~Vi~a~G~~-p~~~~l~~~-g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~ 335 (588)
T 3ics_A 266 -----G--SVIQTDMLILAIGVQ-PESSLAKGA-GLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPL 335 (588)
T ss_dssp -----S--CEEECSEEEECSCEE-ECCHHHHHT-TCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCC
T ss_pred -----C--CEEEcCEEEEccCCC-CChHHHHhc-CceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCccccccc
Confidence 2 268999999999999 677788777 8999999999999 689999999999999973 2 357
Q ss_pred HHHHHHHHHHHHHHHH
Q psy16199 304 TVESVNDGKTAAWHIH 319 (842)
Q Consensus 304 ~~~A~~~G~~aA~~I~ 319 (842)
+..|..||+.||.+|.
T Consensus 336 ~~~A~~~g~~aa~~i~ 351 (588)
T 3ics_A 336 AWPANRQGRMLADIIH 351 (588)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8899999999999985
No 74
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.90 E-value=1.6e-23 Score=242.28 Aligned_cols=222 Identities=19% Similarity=0.184 Sum_probs=162.8
Q ss_pred HHHhcCcEEEeceeec--ccccee--ccc--cccCCCEEEEccCCCCCCCCC-CCCCCccccCceehhcchHHHhhcccC
Q psy16199 60 LVKDLGVKIECERSLS--TRDITI--EKL--RKDGYTAIFIGIGKPNANVIP-IFQGLTEEMGFYTSKTFLPRVATSSKK 132 (842)
Q Consensus 60 ~l~~~gV~i~~~~~v~--~~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~-i~~G~~~~~gv~~~~~~l~~~~~~~~~ 132 (842)
.+++.+|+++.++... .+.+.+ +++ ..+.||+||||||+. |+.++ +| |... .++++.+++.
T Consensus 113 ~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~-p~~p~~i~-G~~~--~~~~~~~~~~-------- 180 (488)
T 3dgz_A 113 QLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGR-PRYPTQVK-GALE--YGITSDDIFW-------- 180 (488)
T ss_dssp HHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEE-ECCCSSCB-THHH--HCBCHHHHTT--------
T ss_pred HHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCC-CCCCCCCC-Cccc--ccCcHHHHHh--------
Confidence 3556789998776432 122333 222 346799999999998 87777 87 5322 2344444332
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCC
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMS 207 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~ 207 (842)
....+++++|||||++|+|+|..|.+.|.+ ||++++.. .++..+.++ +.+.+.||++++++.
T Consensus 181 ----------~~~~~~~vvViGgG~ig~E~A~~l~~~g~~-Vtlv~~~~--~l~~~d~~~~~~l~~~l~~~gv~~~~~~~ 247 (488)
T 3dgz_A 181 ----------LKESPGKTLVVGASYVALECAGFLTGIGLD-TTVMMRSI--PLRGFDQQMSSLVTEHMESHGTQFLKGCV 247 (488)
T ss_dssp ----------CSSCCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESSC--SSTTSCHHHHHHHHHHHHHTTCEEEETEE
T ss_pred ----------hhhcCCeEEEECCCHHHHHHHHHHHHcCCc-eEEEEcCc--ccccCCHHHHHHHHHHHHHCCCEEEeCCE
Confidence 133456799999999999999999999975 99999864 455554433 335678999999999
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccC-CCCCeeeCCCCC
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLD-KYGYPEVNYTTM 284 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~-~~G~i~vd~~~~ 284 (842)
++++...++....+++.+.. +|+..++++|.|++|+|++ |+..+ ++.+ |++++ ++|+|.|| +++
T Consensus 248 v~~i~~~~~~~~~v~~~~~~----------~g~~~~~~~D~vi~a~G~~-p~~~~l~l~~~-g~~~~~~~G~i~vd-~~~ 314 (488)
T 3dgz_A 248 PSHIKKLPTNQLQVTWEDHA----------SGKEDTGTFDTVLWAIGRV-PETRTLNLEKA-GISTNPKNQKIIVD-AQE 314 (488)
T ss_dssp EEEEEECTTSCEEEEEEETT----------TTEEEEEEESEEEECSCEE-ESCGGGTGGGG-TCCBCSSSCCBCCC-TTS
T ss_pred EEEEEEcCCCcEEEEEEeCC----------CCeeEEEECCEEEEcccCC-cccCcCCcccc-CcEecCCCCeEeEC-CCC
Confidence 99987433332235555421 2445578999999999999 56555 4555 89998 88999999 789
Q ss_pred CCCCCCeEEeccCC-CCchhHHHHHHHHHHHHHHHH
Q psy16199 285 ATSVPGVFCGGDTA-NLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 285 ~Ts~~gVfa~GD~~-~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|++|+|||+|||+ ..+..+..|..||+.||.+|.
T Consensus 315 ~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 350 (488)
T 3dgz_A 315 ATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLF 350 (488)
T ss_dssp BCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHc
Confidence 99999999999997 457788999999999999985
No 75
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=4.2e-24 Score=237.90 Aligned_cols=248 Identities=16% Similarity=0.210 Sum_probs=172.7
Q ss_pred eecceeEeecCCCCcc----ccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc-----ccceeccccccCCCEEEE
Q psy16199 24 LSKDLPDIERPVAALP----DSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITIEKLRKDGYTAIFI 94 (842)
Q Consensus 24 ~g~~V~l~Ek~~~GG~----~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~lVl 94 (842)
.| +|+|+|++..++. +...+.....+.++..+..+++++.|+++++++.+.. +.++ .++..+.||+|||
T Consensus 30 ~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lVi 107 (367)
T 1xhc_A 30 TY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVL 107 (367)
T ss_dssp TS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEE
T ss_pred cC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEE
Confidence 35 9999999743332 1111112222333433445667788999999865431 2233 3445567999999
Q ss_pred ccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEE
Q psy16199 95 GIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKV 174 (842)
Q Consensus 95 AtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~V 174 (842)
|||++ |+.+++| | .+++++..++........ .....++|+|||||++|+|+|..|.+.|.+ |
T Consensus 108 ATGs~-p~~p~i~-G---~~~v~~~~~~~~~~~l~~------------~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-V 169 (367)
T 1xhc_A 108 ATGAR-AREPQIK-G---KEYLLTLRTIFDADRIKE------------SIENSGEAIIIGGGFIGLELAGNLAEAGYH-V 169 (367)
T ss_dssp CCCEE-ECCCCSB-T---GGGEECCCSHHHHHHHHH------------HHHHHSEEEEEECSHHHHHHHHHHHHTTCE-E
T ss_pred CCCCC-CCCCCCC-C---cCCEEEEcCHHHHHHHHH------------HhhcCCcEEEECCCHHHHHHHHHHHhCCCE-E
Confidence 99998 8888887 5 345665433222111100 001125699999999999999999999974 9
Q ss_pred EEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEE
Q psy16199 175 LVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYI 249 (842)
Q Consensus 175 tlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~V 249 (842)
|++++.+. .++ .++++ +.+.+.||++++++.++++. .. .|++. +| . +++|.|
T Consensus 170 tlv~~~~~-~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~-------------~g--~-i~~D~v 226 (367)
T 1xhc_A 170 KLIHRGAM-FLG-LDEELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTN-------------SG--F-IEGKVK 226 (367)
T ss_dssp EEECSSSC-CTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEET-------------TE--E-EECSCE
T ss_pred EEEeCCCe-ecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEEC-------------CC--E-EEcCEE
Confidence 99999874 444 44332 34567899999999999985 22 23332 22 3 899999
Q ss_pred EEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCC----chhHHHHHHHHHHHHHHHH
Q psy16199 250 ISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL----SDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 250 i~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~----~~~~~~A~~~G~~aA~~I~ 319 (842)
++|+|++ |+.++++.+ |++++ +| +.|| ++++|+.|+|||+|||+.. +.++..|..||+.||.+|.
T Consensus 227 i~a~G~~-p~~~ll~~~-gl~~~-~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 227 ICAIGIV-PNVDLARRS-GIHTG-RG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILK 295 (367)
T ss_dssp EEECCEE-ECCHHHHHT-TCCBS-SS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHT
T ss_pred EECcCCC-cCHHHHHhC-CCCCC-CC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhc
Confidence 9999999 666688776 88886 45 9999 6899999999999999642 3578999999999999985
No 76
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.90 E-value=1.3e-23 Score=240.90 Aligned_cols=221 Identities=19% Similarity=0.184 Sum_probs=164.8
Q ss_pred HHHHHhcCcEEEeceeecc--ccceec-cccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCc
Q psy16199 58 VELVKDLGVKIECERSLST--RDITIE-KLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGL 134 (842)
Q Consensus 58 ~~~l~~~gV~i~~~~~v~~--~~v~~~-~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~ 134 (842)
.+++++.|++++.++.+.. +.+.+. ++..+.||+||||||++ |+.++++ |+ +..+++++.+++..
T Consensus 96 ~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~-p~~~~~~-g~-~~~~v~~~~~~~~~--------- 163 (455)
T 2yqu_A 96 EFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSA-PLIPPWA-QV-DYERVVTSTEALSF--------- 163 (455)
T ss_dssp HHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEE-ECCCTTB-CC-CSSSEECHHHHTCC---------
T ss_pred HHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCC-CCCCCCC-CC-CcCcEechHHhhcc---------
Confidence 3456678999999875421 223332 23456799999999998 7777777 53 33467776554421
Q ss_pred cCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCce
Q psy16199 135 CGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 135 c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~ 209 (842)
...+++|+|||||++|+|+|..|.+.|.+ |+++++.+. .++..+.++ +.+.+.||++++++.++
T Consensus 164 ---------~~~~~~vvIiGgG~~g~e~A~~l~~~g~~-V~lv~~~~~-~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~ 232 (455)
T 2yqu_A 164 ---------PEVPKRLIVVGGGVIGLELGVVWHRLGAE-VIVLEYMDR-ILPTMDLEVSRAAERVFKKQGLTIRTGVRVT 232 (455)
T ss_dssp ---------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS-SCTTSCHHHHHHHHHHHHHHTCEEECSCCEE
T ss_pred ---------ccCCCeEEEECCCHHHHHHHHHHHHcCCE-EEEEecCCc-cccccCHHHHHHHHHHHHHCCCEEEECCEEE
Confidence 22346699999999999999999999975 999999874 445444332 33557799999999999
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCeeeCCCCCCCC
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPEVNYTTMATS 287 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~vd~~~~~Ts 287 (842)
++...++.+ .+++. +| .++++|.||+|+|.+ |+..+ ++.+ |++++++|++.|| ++++|+
T Consensus 233 ~i~~~~~~v-~v~~~-------------~g--~~i~~D~vv~A~G~~-p~~~~l~~~~~-g~~~~~~g~i~vd-~~~~t~ 293 (455)
T 2yqu_A 233 AVVPEAKGA-RVELE-------------GG--EVLEADRVLVAVGRR-PYTEGLSLENA-GLSTDERGRIPVD-EHLRTR 293 (455)
T ss_dssp EEEEETTEE-EEEET-------------TS--CEEEESEEEECSCEE-ECCTTCCGGGG-TCCCCTTSCCCCC-TTSBCS
T ss_pred EEEEeCCEE-EEEEC-------------CC--eEEEcCEEEECcCCC-cCCCCCChhhc-CCccCCCCcEeEC-CCcccC
Confidence 997433332 23332 12 268999999999999 56554 5555 7888888999999 579999
Q ss_pred CCCeEEeccCCCCchhHHHHHHHHHHHHHHHHH
Q psy16199 288 VPGVFCGGDTANLSDTTVESVNDGKTAAWHIHK 320 (842)
Q Consensus 288 ~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~ 320 (842)
.|+|||+|||+..+..+..|..||+.||.+|..
T Consensus 294 ~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 294 VPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp STTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHhHHHHHHHHcC
Confidence 999999999998888899999999999999964
No 77
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.89 E-value=3.3e-23 Score=241.23 Aligned_cols=221 Identities=21% Similarity=0.276 Sum_probs=159.4
Q ss_pred HHHhcCcEEEeceeec--ccccee--cccc--ccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCC
Q psy16199 60 LVKDLGVKIECERSLS--TRDITI--EKLR--KDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKG 133 (842)
Q Consensus 60 ~l~~~gV~i~~~~~v~--~~~v~~--~~~~--~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~ 133 (842)
.+++.+|+++.++... ...+.+ +++. .+.||+||||||++ |+.+++| |.. ..++++.+++..
T Consensus 139 ~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~-p~~p~i~-G~~--~~~~t~~~~~~l-------- 206 (519)
T 3qfa_A 139 ALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGER-PRYLGIP-GDK--EYCISSDDLFSL-------- 206 (519)
T ss_dssp HHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEE-ECCCCCT-THH--HHCBCHHHHTTC--------
T ss_pred HHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCC-cCCCCCC-Ccc--CceEcHHHHhhh--------
Confidence 3556799998886432 122333 2222 45799999999998 8878887 532 234554444321
Q ss_pred ccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCc
Q psy16199 134 LCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSP 208 (842)
Q Consensus 134 ~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v 208 (842)
...+++++|||||++|+|+|..|.+.|.+ ||++++. ..++..++++ +.+.+.||++++++.+
T Consensus 207 ----------~~~~~~vvVIGgG~ig~E~A~~l~~~G~~-Vtlv~~~--~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v 273 (519)
T 3qfa_A 207 ----------PYCPGKTLVVGASYVALECAGFLAGIGLD-VTVMVRS--ILLRGFDQDMANKIGEHMEEHGIKFIRQFVP 273 (519)
T ss_dssp ----------SSCCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESS--CSSTTSCHHHHHHHHHHHHHTTCEEEESEEE
T ss_pred ----------hhcCCeEEEECCcHHHHHHHHHHHHcCCe-EEEEecc--cccccCCHHHHHHHHHHHHHCCCEEEeCCeE
Confidence 34456799999999999999999999975 9999985 3566555443 2356789999999887
Q ss_pred eEEEcc-C---CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccC-CCCCeeeCC
Q psy16199 209 VQVDVK-D---NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLD-KYGYPEVNY 281 (842)
Q Consensus 209 ~~v~~~-~---~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~-~~G~i~vd~ 281 (842)
+++... + +.+ .+.+... + .++..++++|.|++|+|++ |+.++ ++.+ |++++ ++|+|.||
T Consensus 274 ~~v~~~~~~~~~~~-~v~~~~~----~------g~~~~~~~~D~vi~a~G~~-p~~~~l~l~~~-gl~~~~~~G~I~Vd- 339 (519)
T 3qfa_A 274 IKVEQIEAGTPGRL-RVVAQST----N------SEEIIEGEYNTVMLAIGRD-ACTRKIGLETV-GVKINEKTGKIPVT- 339 (519)
T ss_dssp EEEEEEECCTTCEE-EEEEEES----S------SSCEEEEEESEEEECSCEE-ESCSSSCSTTT-TCCCCTTTCCBCCC-
T ss_pred EEEEEccCCCCceE-EEEEEEC----C------CcEEEEEECCEEEEecCCc-ccCCCCChhhc-CcEEcCCCCeEeeC-
Confidence 777531 1 222 2433321 1 1233578999999999999 55554 4555 89988 68999999
Q ss_pred CCCCCCCCCeEEeccCC-CCchhHHHHHHHHHHHHHHHH
Q psy16199 282 TTMATSVPGVFCGGDTA-NLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 282 ~~~~Ts~~gVfa~GD~~-~~~~~~~~A~~~G~~aA~~I~ 319 (842)
++++|+.|+|||+|||+ ..+..+..|..||+.||.+|.
T Consensus 340 ~~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 340 DEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 378 (519)
T ss_dssp TTSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHc
Confidence 68999999999999998 557889999999999999985
No 78
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.89 E-value=6.6e-23 Score=236.84 Aligned_cols=220 Identities=20% Similarity=0.203 Sum_probs=162.2
Q ss_pred HHhcCcEEEeceeec--ccccee--ccc-cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCcc
Q psy16199 61 VKDLGVKIECERSLS--TRDITI--EKL-RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLC 135 (842)
Q Consensus 61 l~~~gV~i~~~~~v~--~~~v~~--~~~-~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c 135 (842)
+++.+|+++.++..- ...+.+ +++ ..+.||+||||||+. |+.+++| |+.. .++++.+++.
T Consensus 118 ~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~-p~~p~i~-G~~~--~~~~~~~~~~----------- 182 (483)
T 3dgh_A 118 LRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGR-PRYPDIP-GAVE--YGITSDDLFS----------- 182 (483)
T ss_dssp HHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEE-ECCCSST-THHH--HCBCHHHHTT-----------
T ss_pred HHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCC-cCCCCCC-Cccc--ccCcHHHHhh-----------
Confidence 456789988776432 122323 233 246799999999998 8777887 5422 2344444332
Q ss_pred CCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceE
Q psy16199 136 GGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 136 ~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~ 210 (842)
....+++++|||||++|+|+|..+.+.|.+ ||++++.. .++..+.++ +.+.+.||++++++.+++
T Consensus 183 -------~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~~--~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~ 252 (483)
T 3dgh_A 183 -------LDREPGKTLVVGAGYIGLECAGFLKGLGYE-PTVMVRSI--VLRGFDQQMAELVAASMEERGIPFLRKTVPLS 252 (483)
T ss_dssp -------CSSCCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSC--SSTTSCHHHHHHHHHHHHHTTCCEEETEEEEE
T ss_pred -------hhhcCCcEEEECCCHHHHHHHHHHHHcCCE-EEEEeCCC--CCcccCHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 133456799999999999999999999975 99999853 555554433 335678999999999999
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHH--hhcCCcccCCCCCeeeCCCCCCCCC
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVL--EAIKPVKLDKYGYPEVNYTTMATSV 288 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~--~~l~gl~~~~~G~i~vd~~~~~Ts~ 288 (842)
+...++....|++.++. +++..++++|.|++|+|++ |+..++ +.+ |+++++ |+|.|| ++++|+.
T Consensus 253 i~~~~~~~~~v~~~~~~----------~~~~~~~~~D~vi~a~G~~-p~~~~l~l~~~-gl~~~~-G~i~vd-~~~~t~~ 318 (483)
T 3dgh_A 253 VEKQDDGKLLVKYKNVE----------TGEESEDVYDTVLWAIGRK-GLVDDLNLPNA-GVTVQK-DKIPVD-SQEATNV 318 (483)
T ss_dssp EEECTTSCEEEEEEETT----------TCCEEEEEESEEEECSCEE-ECCGGGTGGGT-TCCCBT-TBBCCC-TTCBCSS
T ss_pred EEEcCCCcEEEEEecCC----------CCceeEEEcCEEEECcccc-cCcCcCCchhc-CccccC-CEEEEC-cCCccCC
Confidence 97533322236666531 2445689999999999999 566654 555 899998 999999 6899999
Q ss_pred CCeEEeccCC-CCchhHHHHHHHHHHHHHHHH
Q psy16199 289 PGVFCGGDTA-NLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 289 ~gVfa~GD~~-~~~~~~~~A~~~G~~aA~~I~ 319 (842)
|+|||+|||+ +.+..+..|..||+.||.+|.
T Consensus 319 ~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 319 ANIYAVGDIIYGKPELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp TTEEECSTTBTTSCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcccCCCCccHHHHHHHHHHHHHHHc
Confidence 9999999997 457889999999999999985
No 79
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.89 E-value=5.2e-23 Score=226.17 Aligned_cols=175 Identities=22% Similarity=0.274 Sum_probs=147.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCC-CCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHG-MGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~-~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
.|+++||. |.+++++.+++++++++|+|+||||++||.. ....++|+++..+++.+.++++++++.+++||++|+++.
T Consensus 58 ~p~~vQL~-g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g 136 (350)
T 3b0p_A 58 HPIALQLA-GSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG 136 (350)
T ss_dssp CSEEEEEE-CSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC
T ss_pred CeEEEEeC-CCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC
Confidence 79999997 6789999999999999999999999999953 335678999999999999999999999999999999765
Q ss_pred hh------cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCC---ccccchHHHHHHHHhh
Q psy16199 643 IT------NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGN---ATRPMGLKAVSSIAKM 713 (842)
Q Consensus 643 ~~------~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~---~~~p~al~~v~~i~~~ 713 (842)
.+ +..++++.++++|+|+|+++.+. ..+|++|+ ...|..+++++++++.
T Consensus 137 ~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~----------------------~~~g~~g~~~~~~~~~~~~~i~~ik~~ 194 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEAGVKVFVVHARS----------------------ALLALSTKANREIPPLRHDWVHRLKGD 194 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHTTCCEEEEECSC----------------------BC----------CCCCCHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHcCCCEEEEecCc----------------------hhcccCcccccCCCcccHHHHHHHHHh
Confidence 54 46889999999999999996542 22345553 2345668999999999
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
++++|||++|||.|++|+.+++. |||+||+||+++ .+|+++.++.+.+
T Consensus 195 ~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l-~~P~l~~~i~~~l 242 (350)
T 3b0p_A 195 FPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVY-EDPFVLEEADRRV 242 (350)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHH-HCGGGGTTHHHHT
T ss_pred CCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHH-hCcHHHHHHHHHh
Confidence 86799999999999999999998 999999999999 4699998876543
No 80
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.89 E-value=9.2e-23 Score=236.95 Aligned_cols=221 Identities=17% Similarity=0.177 Sum_probs=161.3
Q ss_pred HHHHhcCcEEEecee--ecccccee--c----cccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcc
Q psy16199 59 ELVKDLGVKIECERS--LSTRDITI--E----KLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSS 130 (842)
Q Consensus 59 ~~l~~~gV~i~~~~~--v~~~~v~~--~----~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~ 130 (842)
..+++.+|+++.+.. ++.+.+.+ . +...+.+|++|||||++ |+.||.+++ +...++++.+++..
T Consensus 148 ~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~-P~~P~~~~~--~~~~~~ts~~~l~l----- 219 (542)
T 4b1b_A 148 TGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCR-PHIPDDVEG--AKELSITSDDIFSL----- 219 (542)
T ss_dssp HHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEE-ECCCSSSBT--HHHHCBCHHHHTTC-----
T ss_pred HHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCC-CCCCCcccC--CCccccCchhhhcc-----
Confidence 345677999887763 22233332 1 22345699999999999 776665433 33456777766642
Q ss_pred cCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHHH-----HHHhcCcEEecC
Q psy16199 131 KKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQ-----LAWEEKCEFLPF 205 (842)
Q Consensus 131 ~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~-----~~~~~gV~i~~~ 205 (842)
..++++++|||||++|+|+|..+.++|.+ ||++.|.. .++..+.++. .+.+.||.++++
T Consensus 220 -------------~~lP~~lvIIGgG~IGlE~A~~~~~lG~~-VTii~~~~--~L~~~D~ei~~~l~~~l~~~gi~~~~~ 283 (542)
T 4b1b_A 220 -------------KKDPGKTLVVGASYVALECSGFLNSLGYD-VTVAVRSI--VLRGFDQQCAVKVKLYMEEQGVMFKNG 283 (542)
T ss_dssp -------------SSCCCSEEEECCSHHHHHHHHHHHHHTCC-EEEEESSC--SSTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred -------------ccCCceEEEECCCHHHHHHHHHHHhcCCe-EEEecccc--cccccchhHHHHHHHHHHhhcceeecc
Confidence 56778899999999999999999999986 99998753 5666665543 356789999999
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCC
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMA 285 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~ 285 (842)
..++++...++.+. |.+.+ + .++.+|.|++|+|++|+...+-.+..|+++++++.+.+++++++
T Consensus 284 ~~v~~~~~~~~~~~-v~~~~-------------~--~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~ 347 (542)
T 4b1b_A 284 ILPKKLTKMDDKIL-VEFSD-------------K--TSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSC 347 (542)
T ss_dssp CCEEEEEEETTEEE-EEETT-------------S--CEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSB
T ss_pred eEEEEEEecCCeEE-EEEcC-------------C--CeEEEEEEEEcccccCCccccCcccceeeecccCceEecccccc
Confidence 99999875555443 44432 1 25679999999999944344433333788887777644448999
Q ss_pred CCCCCeEEeccCCCC-chhHHHHHHHHHHHHHHHH
Q psy16199 286 TSVPGVFCGGDTANL-SDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 286 Ts~~gVfa~GD~~~~-~~~~~~A~~~G~~aA~~I~ 319 (842)
|++|+|||+|||+++ |.+.+.|..+|+.|+.++.
T Consensus 348 Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~ 382 (542)
T 4b1b_A 348 TNIPSIFAVGDVAENVPELAPVAIKAGEILARRLF 382 (542)
T ss_dssp CSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999865 6789999999999999985
No 81
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.89 E-value=2.5e-22 Score=221.54 Aligned_cols=216 Identities=17% Similarity=0.166 Sum_probs=151.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHH--HHHHHHHHHHhhCCccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPE--MVRNISLWVRSSVKIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~--~~~~ii~~v~~~~~~Pv~vKl~p 641 (842)
.|+++++..+.+++++.++ ++.+|+|+|++|++||+...... .+++ .+.++++++++.+++||++|+.+
T Consensus 117 ~pv~~~i~~~~~~~~~~~~---~~~~gad~i~i~~~~~~~~~~~~------~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~ 187 (349)
T 1p0k_A 117 GLIFANLGSEATAAQAKEA---VEMIGANALQIHLNVIQEIVMPE------GDRSFSGALKRIEQICSRVSVPVIVKEVG 187 (349)
T ss_dssp SCEEEEEETTCCHHHHHHH---HHHTTCSEEEEEECTTTTC--------------CTTHHHHHHHHHHHCSSCEEEEEES
T ss_pred ceeEEeecCCCCHHHHHHH---HHhcCCCeEEecccchhhhcCCC------CCcchHHHHHHHHHHHHHcCCCEEEEecC
Confidence 6899999766777766554 44568999999999997432211 2333 37899999999999999999853
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
...+ .+.++.+.++|+|+|+++|+ +++...+++..+... + ......+|.+ ....+.++++.++++|||+
T Consensus 188 ~~~~-~~~a~~a~~~Gad~I~v~~~-ggt~~~~~e~~r~~~-~-~~~~~~~g~~-------~~~~l~~v~~~~~~ipvia 256 (349)
T 1p0k_A 188 FGMS-KASAGKLYEAGAAAVDIGGY-GGTNFSKIENLRRQR-Q-ISFFNSWGIS-------TAASLAEIRSEFPASTMIA 256 (349)
T ss_dssp SCCC-HHHHHHHHHHTCSEEEEEC----------------C-C-GGGGTTCSCC-------HHHHHHHHHHHCTTSEEEE
T ss_pred CCCC-HHHHHHHHHcCCCEEEEcCC-CCcchhhHHHhhccc-c-hhhhhccCcc-------HHHHHHHHHHhcCCCeEEE
Confidence 2222 57789999999999999997 333333333211000 0 0000122222 3667778888766799999
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEehhhhcc----Cc----hhHHHHHHHHHHHHHhcCC-CccccCCCCCCCccccCCCC
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQICSAVQNQ----DF----TVVDDYITGLQTLLYLKST-QLKGWDGQSPPTPVHQKGKP 792 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~----gp----~~~~~i~~~l~~~m~~~g~-~i~~~~~~~~~~~~~~~g~~ 792 (842)
+|||.|++|+.+++++||++|||||++++. |+ .++..+.++|+.+|...|+ +++++++. .....|+
T Consensus 257 ~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~~i~el~~~----~~~~~~~- 331 (349)
T 1p0k_A 257 SGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKA----PLVIKGE- 331 (349)
T ss_dssp ESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBHHHHTTC----CEEECHH-
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhC----CeeccHH-
Confidence 999999999999999999999999999975 55 7889999999999999999 99999875 3333443
Q ss_pred CCcchhhccCCC
Q psy16199 793 AYQFRDKEGKAI 804 (842)
Q Consensus 793 ~~~~~~~~g~~~ 804 (842)
+.+|.+.||+.+
T Consensus 332 ~~~~~~~~~~~~ 343 (349)
T 1p0k_A 332 THHWLTERGVNT 343 (349)
T ss_dssp HHHHHHHTTCCS
T ss_pred HHHHHHHcCCCH
Confidence 678888888755
No 82
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.88 E-value=1.6e-22 Score=226.61 Aligned_cols=262 Identities=14% Similarity=0.072 Sum_probs=179.8
Q ss_pred ccCceeeecceeEeecCCCCcc-----ccccCCCCCCCHHHHH-HHHHHHHhcCcEEEeceeecc-----ccceeccccc
Q psy16199 18 STAKVCLSKDLPDIERPVAALP-----DSSEIPQYRLPFDAVN-FEVELVKDLGVKIECERSLST-----RDITIEKLRK 86 (842)
Q Consensus 18 ~~~~~~~g~~V~l~Ek~~~GG~-----~~~~iP~~~~~~~~v~-~~~~~l~~~gV~i~~~~~v~~-----~~v~~~~~~~ 86 (842)
..++....++|+|+|++. |+. +...++....+.++.. ...+++++.++++++++.+.. +.+.+++ ..
T Consensus 22 ~l~~~g~~~~V~lie~~~-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~ 99 (384)
T 2v3a_A 22 EWRKLDGETPLLMITADD-GRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE-EE 99 (384)
T ss_dssp HHHTTCSSSCEEEECSSC-CCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT-EE
T ss_pred HHHhhCCCCCEEEEECCC-CCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC-cE
Confidence 333333346799999874 332 2222333333334333 234456788999998865431 2344443 24
Q ss_pred cCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHH
Q psy16199 87 DGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSA 166 (842)
Q Consensus 87 ~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l 166 (842)
+.||+||||||++ |+.+++| |. +.++++++.++........ ....+++++|||+|++|+|+|..|
T Consensus 100 ~~~d~lviAtG~~-p~~p~i~-g~-~~~~v~~~~~~~~~~~~~~------------~~~~~~~v~ViGgG~~g~e~A~~l 164 (384)
T 2v3a_A 100 VRYRDLVLAWGAE-PIRVPVE-GD-AQDALYPINDLEDYARFRQ------------AAAGKRRVLLLGAGLIGCEFANDL 164 (384)
T ss_dssp EECSEEEECCCEE-ECCCCCB-ST-TTTCEEECSSHHHHHHHHH------------HHTTCCEEEEECCSHHHHHHHHHH
T ss_pred EECCEEEEeCCCC-cCCCCCC-Cc-CcCCEEEECCHHHHHHHHH------------hhccCCeEEEECCCHHHHHHHHHH
Confidence 6799999999998 7888888 53 4457887766554321100 011245699999999999999999
Q ss_pred HHcCCcEEEEEEeecCccccC-CHHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCc
Q psy16199 167 LRCGANKVLVVFRKGCTNIRA-VPEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQ 240 (842)
Q Consensus 167 ~~~G~~~Vtlv~r~~~~~~~~-~~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~ 240 (842)
.+.|.+ |+++++.+. .++. .+.+ .+.+.+.||++++++.++++...++. ..+++.+ |
T Consensus 165 ~~~g~~-Vtlv~~~~~-~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~-------------g- 227 (384)
T 2v3a_A 165 SSGGYQ-LDVVAPCEQ-VMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-LEAHLSD-------------G- 227 (384)
T ss_dssp HHTTCE-EEEEESSSS-SSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE-EEEEETT-------------S-
T ss_pred HhCCCe-EEEEecCcc-hhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE-EEEEECC-------------C-
Confidence 999975 999999874 3333 2332 23455789999999999999743333 2344432 2
Q ss_pred eEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC--Cc--hhHHHHHHHHHHHHH
Q psy16199 241 RIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN--LS--DTTVESVNDGKTAAW 316 (842)
Q Consensus 241 ~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~--~~--~~~~~A~~~G~~aA~ 316 (842)
.++++|.||+|+|.+ |+.++++.+ |++++ +| |.|| ++++|+.|+|||+|||+. +. ..+..|..||+.||.
T Consensus 228 -~~i~~d~vv~a~G~~-p~~~l~~~~-g~~~~-~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~ 301 (384)
T 2v3a_A 228 -EVIPCDLVVSAVGLR-PRTELAFAA-GLAVN-RG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQ 301 (384)
T ss_dssp -CEEEESEEEECSCEE-ECCHHHHHT-TCCBS-SS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHH
T ss_pred -CEEECCEEEECcCCC-cCHHHHHHC-CCCCC-CC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHH
Confidence 268999999999999 666688777 89887 57 9999 579999999999999974 21 357789999999999
Q ss_pred HHH
Q psy16199 317 HIH 319 (842)
Q Consensus 317 ~I~ 319 (842)
+|.
T Consensus 302 ~i~ 304 (384)
T 2v3a_A 302 TLA 304 (384)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
No 83
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.88 E-value=1.5e-22 Score=240.10 Aligned_cols=220 Identities=20% Similarity=0.284 Sum_probs=156.3
Q ss_pred HHhcCcEEEecee--ecccccee--ccc--cccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCc
Q psy16199 61 VKDLGVKIECERS--LSTRDITI--EKL--RKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGL 134 (842)
Q Consensus 61 l~~~gV~i~~~~~--v~~~~v~~--~~~--~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~ 134 (842)
+++.+|+++.+.. ++...+.+ +++ ..+.||+||||||++ |+.+++| |... .++++.+++.
T Consensus 216 ~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~-p~~p~i~-G~~~--~~~~~~~~~~---------- 281 (598)
T 2x8g_A 216 LRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGER-PKYPEIP-GAVE--YGITSDDLFS---------- 281 (598)
T ss_dssp HHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEE-ECCCSST-THHH--HCEEHHHHTT----------
T ss_pred HhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCC-CCCCCCC-Cccc--ceEcHHHHhh----------
Confidence 4567899886643 22223333 222 245699999999997 8888887 5322 2344433321
Q ss_pred cCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCce
Q psy16199 135 CGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 135 c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~ 209 (842)
....+++|+|||||++|+|+|..|.+.|.+ ||+++|. ..++..++++ +.+.+.||++++++.++
T Consensus 282 --------~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-Vtlv~~~--~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~ 350 (598)
T 2x8g_A 282 --------LPYFPGKTLVIGASYVALECAGFLASLGGD-VTVMVRS--ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPD 350 (598)
T ss_dssp --------CSSCCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESS--CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEE
T ss_pred --------CccCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEECC--cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEE
Confidence 023356799999999999999999999975 9999987 3555554432 33557799999998887
Q ss_pred EEEcc------C---CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH--HhhcCCcccCCCCCee
Q psy16199 210 QVDVK------D---NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV--LEAIKPVKLDKYGYPE 278 (842)
Q Consensus 210 ~v~~~------~---~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l--~~~l~gl~~~~~G~i~ 278 (842)
++... + +++. +.+.. .+|+..++++|.||+|+|++ |+.++ ++.+ |++++++|+|.
T Consensus 351 ~v~~~~~~~~~~~~~~~~~-v~~~~-----------~~g~~~~~~~D~vi~a~G~~-p~~~~l~~~~~-gl~~~~~G~i~ 416 (598)
T 2x8g_A 351 EIKQLKVVDTENNKPGLLL-VKGHY-----------TDGKKFEEEFETVIFAVGRE-PQLSKVLCETV-GVKLDKNGRVV 416 (598)
T ss_dssp EEEEEECCBTTTTBCCEEE-EEEEE-----------TTSCEEEEEESEEEECSCEE-ECGGGTBCGGG-CCCBCTTSCBC
T ss_pred EEEeccccccccCCCceEE-EEEEe-----------CCCcEEeccCCEEEEEeCCc-cccCccCchhc-CceECCCCcEE
Confidence 77421 1 2221 22211 13454567799999999999 67765 3455 89999999999
Q ss_pred eCCCCCCCCCCCeEEeccCC-CCchhHHHHHHHHHHHHHHHHH
Q psy16199 279 VNYTTMATSVPGVFCGGDTA-NLSDTTVESVNDGKTAAWHIHK 320 (842)
Q Consensus 279 vd~~~~~Ts~~gVfa~GD~~-~~~~~~~~A~~~G~~aA~~I~~ 320 (842)
|| ++++|+.|+|||+|||+ ..+..+..|+.||+.||.+|..
T Consensus 417 vd-~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 417 CT-DDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp CC-TTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred eC-CCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhc
Confidence 99 57999999999999995 4467889999999999999863
No 84
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=1.5e-22 Score=223.04 Aligned_cols=255 Identities=13% Similarity=0.122 Sum_probs=171.4
Q ss_pred eecceeEeecC-CCCcccccc--------------CCCCCCC---------HHHHHHHHHHHHhcCcEEEeceeecc---
Q psy16199 24 LSKDLPDIERP-VAALPDSSE--------------IPQYRLP---------FDAVNFEVELVKDLGVKIECERSLST--- 76 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~~--------------iP~~~~~---------~~~v~~~~~~l~~~gV~i~~~~~v~~--- 76 (842)
.|++|+|+|+. .+||.+... .|.+..+ .++.++..+.++++|+++++++.|..
T Consensus 25 ~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~ 104 (357)
T 4a9w_A 25 SGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSH 104 (357)
T ss_dssp SSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEE
T ss_pred CCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE
Confidence 48999999997 889875432 2222111 46777888888899999999876542
Q ss_pred --cc---ceeccccccCCCEEEEccCCC-CCCCCCCCCCCccccC-ceehhcchHHHhhcccCCccCCCCCCCCCCC-CC
Q psy16199 77 --RD---ITIEKLRKDGYTAIFIGIGKP-NANVIPIFQGLTEEMG-FYTSKTFLPRVATSSKKGLCGGCKKESLPIL-KG 148 (842)
Q Consensus 77 --~~---v~~~~~~~~~yd~lVlAtGs~-~~~~~~i~~G~~~~~g-v~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~-~~ 148 (842)
.. ++.+++ .+.||+||+|||+. .++.+++| |+....+ +++..++. +. ... .+
T Consensus 105 ~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~-g~~~~~~~~~~~~~~~---------------~~---~~~~~~ 164 (357)
T 4a9w_A 105 FGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQ-GLESFAGIQLHSAHYS---------------TP---APFAGM 164 (357)
T ss_dssp ETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCT-TGGGCCSEEEEGGGCC---------------CS---GGGTTS
T ss_pred CCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCC-CccccCCcEEEeccCC---------------Ch---hhcCCC
Confidence 11 333443 45699999999964 25556776 5444332 22222222 11 222 34
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCC--HHHH-----H----------------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAV--PEEV-----Q---------------------------- 193 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~--~~~~-----~---------------------------- 193 (842)
+|+|||+|++|+|+|..|.+.| + |++++++....++.. ...+ +
T Consensus 165 ~v~VvG~G~~g~e~a~~l~~~~-~-v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
T 4a9w_A 165 RVAIIGGGNSGAQILAEVSTVA-E-TTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVL 242 (357)
T ss_dssp EEEEECCSHHHHHHHHHHTTTS-E-EEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCCHHHH
T ss_pred EEEEECCCcCHHHHHHHHHhhC-C-EEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHH
Confidence 5999999999999999999987 4 999998843333322 1111 0
Q ss_pred HHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCC
Q psy16199 194 LAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDK 273 (842)
Q Consensus 194 ~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~ 273 (842)
...+.|+ +.....+.++.. + . +.+. +| .++++|.||+++|++ |+.++++.+ |+. ++
T Consensus 243 ~~~~~g~-i~~~~~v~~~~~-~-~---v~~~-------------~g--~~i~~D~vi~a~G~~-p~~~~l~~~-gl~-~~ 298 (357)
T 4a9w_A 243 DARARGV-LAAVPPPARFSP-T-G---MQWA-------------DG--TERAFDAVIWCTGFR-PALSHLKGL-DLV-TP 298 (357)
T ss_dssp HHHHTTC-CCEECCCSEEET-T-E---EECT-------------TS--CEEECSEEEECCCBC-CCCGGGTTT-TCB-CT
T ss_pred HHHhcCc-eEEecCcceEeC-C-e---eEEC-------------CC--CEecCCEEEECCCcC-CCCcccCcc-ccc-CC
Confidence 1112333 333444444431 1 1 2221 22 378999999999999 677788776 788 88
Q ss_pred CCCeeeCCC-CCCCCCCCeEEec--cCCC-CchhHHHHHHHHHHHHHHHHHHHHh
Q psy16199 274 YGYPEVNYT-TMATSVPGVFCGG--DTAN-LSDTTVESVNDGKTAAWHIHKYIQE 324 (842)
Q Consensus 274 ~G~i~vd~~-~~~Ts~~gVfa~G--D~~~-~~~~~~~A~~~G~~aA~~I~~~L~~ 324 (842)
+|+|.||+. .++|+.|+|||+| |++. .+.++..|..||+.||.+|.++|++
T Consensus 299 ~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 299 QGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp TSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 899999953 2899999999999 6655 4577888999999999999999865
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.87 E-value=2.7e-22 Score=248.91 Aligned_cols=259 Identities=10% Similarity=0.051 Sum_probs=190.1
Q ss_pred ecceeEeecC-CCCcccccc----CCCCCCCHHHHHHHHHHHHhc-CcEEEeceeeccc--------------ccee---
Q psy16199 25 SKDLPDIERP-VAALPDSSE----IPQYRLPFDAVNFEVELVKDL-GVKIECERSLSTR--------------DITI--- 81 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~~----iP~~~~~~~~v~~~~~~l~~~-gV~i~~~~~v~~~--------------~v~~--- 81 (842)
|++|+|+|++ .+||++.++ ++. ..+.+++....+++.+. ++++++++.+... .+.+
T Consensus 151 G~~V~lie~~~~~GG~~~~~~k~~i~~-~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~ 229 (965)
T 2gag_A 151 GARVMLLDERAEAGGTLLDTAGEQIDG-MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSG 229 (965)
T ss_dssp TCCEEEECSSSSSSGGGGGSSCCEETT-EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCC
T ss_pred CCcEEEEeCCCCCCceeccCCccccCC-CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeeccccccccc
Confidence 8999999996 899987642 121 12346666667777775 8999988765310 1111
Q ss_pred -----ccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCC-CcEEEEcC
Q psy16199 82 -----EKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILK-GTVIVLGA 155 (842)
Q Consensus 82 -----~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~-~kVvVIGg 155 (842)
+++..+.||+||||||+. ++.+++| |. +.++++++.++...++.. ...+ ++|+|||+
T Consensus 230 ~~~~~~~~~~i~~d~lVlATGs~-p~~~~ip-G~-~~~gv~~~~~~~~~l~~~--------------~~~~gk~vvViGg 292 (965)
T 2gag_A 230 PGVSRERIWHIRAKQVVLATGAH-ERPIVFE-NN-DRPGIMLAGAVRSYLNRY--------------GVRAGARIAVATT 292 (965)
T ss_dssp TTCCSEEEEEEEEEEEEECCCEE-ECCCCCB-TC-CSTTEEEHHHHHHHHHTT--------------CEESCSSEEEEES
T ss_pred ccCCCCceEEEECCEEEECCCCc-cCCCCCC-CC-CCCCEEEhHHHHHHHHhc--------------CCCCCCeEEEEcC
Confidence 122345799999999998 8888888 64 678999876554333211 1223 45999999
Q ss_pred ChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEcc-CCcEEEEEEEeecccCCCCe
Q psy16199 156 GDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVK-DNKIAGMQFNRTEQNEKGEW 234 (842)
Q Consensus 156 G~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~-~~~v~~V~~~~~~~~~~G~~ 234 (842)
|++|+|+|..|.+.|.+ |+|+++++. .+ .. .+.+.+.||++++++.++++... ++++.+|++.+. +.++
T Consensus 293 G~~g~E~A~~L~~~G~~-Vtvv~~~~~-~~---~~-~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~--~~~~-- 362 (965)
T 2gag_A 293 NDSAYELVRELAATGGV-VAVIDARSS-IS---AA-AAQAVADGVQVISGSVVVDTEADENGELSAIVVAEL--DEAR-- 362 (965)
T ss_dssp STTHHHHHHHHGGGTCC-SEEEESCSS-CC---HH-HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEE--CTTC--
T ss_pred CHHHHHHHHHHHHcCCc-EEEEECCCc-cc---hh-HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEec--cccC--
Confidence 99999999999999987 999999874 22 22 56678899999999999999843 677878888751 0000
Q ss_pred eccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCC-----CCCCCeEEeccCCCCchhHHHHHH
Q psy16199 235 VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMA-----TSVPGVFCGGDTANLSDTTVESVN 309 (842)
Q Consensus 235 ~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~-----Ts~~gVfa~GD~~~~~~~~~~A~~ 309 (842)
.+|+..+++||.|++++|++ |+.+++... +|.+.+|+ .++ |+.|+|||+|||+..+. +..|+.
T Consensus 363 --~~G~~~~i~~D~Vv~a~G~~-P~~~l~~~~-------~g~i~vd~-~~~~~v~~ts~p~IyAaGD~a~~~~-l~~A~~ 430 (965)
T 2gag_A 363 --ELGGTQRFEADVLAVAGGFN-PVVHLHSQR-------QGKLDWDT-TIHAFVPADAVANQHLAGAMTGRLD-TASALS 430 (965)
T ss_dssp --CEEEEEEEECSEEEEECCEE-ECCHHHHHT-------TCCEEEET-TTTEEEECSCCTTEEECGGGGTCCS-HHHHHH
T ss_pred --CCCceEEEEcCEEEECCCcC-cChHHHHhC-------CCcEEEcC-cccccccCCCCCCEEEEEecCCchh-HHHHHH
Confidence 01334689999999999999 677776654 36788884 454 89999999999987655 459999
Q ss_pred HHHHHHHHHHHHHH
Q psy16199 310 DGKTAAWHIHKYIQ 323 (842)
Q Consensus 310 ~G~~aA~~I~~~L~ 323 (842)
||+.||.+|..++.
T Consensus 431 ~G~~aA~~i~~~lg 444 (965)
T 2gag_A 431 TGAATGAAAATAAG 444 (965)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999998874
No 86
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.87 E-value=1e-22 Score=246.07 Aligned_cols=259 Identities=10% Similarity=0.058 Sum_probs=177.8
Q ss_pred ecceeEeecC-CCCccccc--cCCCCCCCHHHHHHHHHHHHhc------CcEEEeceeeccccceeccccccCCCEEEEc
Q psy16199 25 SKDLPDIERP-VAALPDSS--EIPQYRLPFDAVNFEVELVKDL------GVKIECERSLSTRDITIEKLRKDGYTAIFIG 95 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~--~iP~~~~~~~~v~~~~~~l~~~------gV~i~~~~~v~~~~v~~~~~~~~~yd~lVlA 95 (842)
||+|+|||+. .+||++.+ .+|.........++..+.++.. ++++..++.+. ++++..+.||+||||
T Consensus 412 G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~~v~-----~~~~~~~~~d~vviA 486 (729)
T 1o94_A 412 GYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQKPMT-----ADDVLQYGADKVIIA 486 (729)
T ss_dssp TCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCCCCC-----HHHHHTSCCSEEEEC
T ss_pred CCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCeEEe-----hhhccccCCCEEEEc
Confidence 9999999996 89998754 3343322234444444444443 68887765443 555556789999999
Q ss_pred cCCCC-------CCCCCCCCCCcc-ccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEc--CChhHHHHHHH
Q psy16199 96 IGKPN-------ANVIPIFQGLTE-EMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLG--AGDTAFDCATS 165 (842)
Q Consensus 96 tGs~~-------~~~~~i~~G~~~-~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIG--gG~~g~e~A~~ 165 (842)
||+.. |+.+++| |..+ .++++++.++++.. ....++|+||| ||++|+|+|..
T Consensus 487 tG~~~~~~~~~~p~~~~ip-G~~~~~~~v~~~~~~l~~~-----------------~~~gk~VvVIG~GgG~~g~e~A~~ 548 (729)
T 1o94_A 487 TGARWNTDGTNCLTHDPIP-GADASLPDQLTPEQVMDGK-----------------KKIGKRVVILNADTYFMAPSLAEK 548 (729)
T ss_dssp CCEEECSSCCCTTTSSCCT-TCCTTSTTEECHHHHHHCC-----------------SCCCSEEEEEECCCSSHHHHHHHH
T ss_pred CCCCcccccccCccCCCCC-CccccCCCEEEHHHHhcCC-----------------CCCCCeEEEEcCCCCchHHHHHHH
Confidence 99972 4567787 6432 46788877765420 12234599999 99999999999
Q ss_pred HHHcCCcEEEEEEeecCc---cccCCHH-HHHHHHhcCcEEecCCCceEEEccCCcEEEEEE--Eee-c--ccCCCCe-e
Q psy16199 166 ALRCGANKVLVVFRKGCT---NIRAVPE-EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF--NRT-E--QNEKGEW-V 235 (842)
Q Consensus 166 l~~~G~~~Vtlv~r~~~~---~~~~~~~-~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~--~~~-~--~~~~G~~-~ 235 (842)
|.+.|. +||++++.+.. .++.... ..+.+.++||++++++.++++.. + .+. +.. .+. + .++.|.. .
T Consensus 549 l~~~G~-~Vtlv~~~~l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~-~-~v~-~~~~~~~~~~~~~~~~~~~~~ 624 (729)
T 1o94_A 549 LATAGH-EVTIVSGVHLANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIEP-G-RME-IYNIWGDGSKRTYRGPGVSPR 624 (729)
T ss_dssp HHHTTC-EEEEEESSCTTHHHHHTTCHHHHHHHHHHTTCEEECSEEEEEEET-T-EEE-EEETTCSCSCCCCCCTTSCSS
T ss_pred HHHcCC-EEEEEecccccccccccccHHHHHHHHHhCCCEEEcCcEEEEEEC-C-eEE-EEEecCCceEEeccccccccc
Confidence 999997 59999998610 1222222 33456788999999999999973 3 222 221 111 0 0111111 2
Q ss_pred ccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHH
Q psy16199 236 EDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA 315 (842)
Q Consensus 236 ~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA 315 (842)
..++++.+++||.||+|+|++ |+..+++.+ +. .+| ++++|++|+|||+|||+. +.++..|+.||+.||
T Consensus 625 ~~~~~~~~i~aD~Vv~a~G~~-p~~~l~~~l-~~--------~vd-~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA 692 (729)
T 1o94_A 625 DANTSHRWIEFDSLVLVTGRH-SECTLWNEL-KA--------RES-EWAENDIKGIYLIGDAEA-PRLIADATFTGHRVA 692 (729)
T ss_dssp CCCCCCEEEECSEEEEESCEE-ECCHHHHHH-HH--------TGG-GTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHH
T ss_pred ccCCcceeeeCCEEEECCCCC-CChHHHHHH-hh--------hcc-cccccCCCCeEEEeCccc-hhhHHHHHHHHHHHH
Confidence 345666789999999999999 676777654 11 256 578999999999999986 567889999999999
Q ss_pred HHHHHHH
Q psy16199 316 WHIHKYI 322 (842)
Q Consensus 316 ~~I~~~L 322 (842)
.+|.+++
T Consensus 693 ~~i~~~l 699 (729)
T 1o94_A 693 REIEEAN 699 (729)
T ss_dssp HTTTSSC
T ss_pred HHhhhhc
Confidence 9997654
No 87
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.87 E-value=7.2e-22 Score=237.69 Aligned_cols=246 Identities=13% Similarity=0.043 Sum_probs=181.9
Q ss_pred ecceeEeecC-CCCccccc--cCCCCCCCHHHHHHHHHHHHhc-CcEEEeceeeccccceeccccccCCCEEEEccCCCC
Q psy16199 25 SKDLPDIERP-VAALPDSS--EIPQYRLPFDAVNFEVELVKDL-GVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~--~iP~~~~~~~~v~~~~~~l~~~-gV~i~~~~~v~~~~v~~~~~~~~~yd~lVlAtGs~~ 100 (842)
||+|+|+|+. .+||++.+ .+|.+....+++++..+++++. +|++++++.+. .++.....||+||||||+..
T Consensus 414 G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-----~~~~~~~~~d~lvlAtG~~~ 488 (690)
T 3k30_A 414 GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT-----GDDIVEFGFEHVITATGATW 488 (690)
T ss_dssp TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC-----HHHHHHTTCCEEEECCCEEE
T ss_pred CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec-----HHHHhhcCCCEEEEcCCCcc
Confidence 9999999996 89998754 5676666678888888999998 99999998765 44555678999999999972
Q ss_pred -------CCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEc--CChhHHHHHHHHHHcCC
Q psy16199 101 -------ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLG--AGDTAFDCATSALRCGA 171 (842)
Q Consensus 101 -------~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIG--gG~~g~e~A~~l~~~G~ 171 (842)
+..+++| |. +..+++++.+++.. .....++|+||| +|.+|+|+|..|.+.|.
T Consensus 489 ~~~~~~~~~~~~i~-G~-~~~~v~~~~~~l~~-----------------~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~ 549 (690)
T 3k30_A 489 RTDGVARFHTTALP-IA-EGMQVLGPDDLFAG-----------------RLPDGKKVVVYDDDHYYLGGVVAELLAQKGY 549 (690)
T ss_dssp CSSCCSSSCSSCCC-BC-TTSEEECHHHHHTT-----------------CCCSSSEEEEEECSCSSHHHHHHHHHHHTTC
T ss_pred ccccccccCCCCCC-CC-CCCcEEcHHHHhCC-----------------CCCCCCEEEEEcCCCCccHHHHHHHHHhCCC
Confidence 2356676 53 44567776665542 022234599999 99999999999999986
Q ss_pred cEEEEEEeecCccc----cCCHH-HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEEC
Q psy16199 172 NKVLVVFRKGCTNI----RAVPE-EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKA 246 (842)
Q Consensus 172 ~~Vtlv~r~~~~~~----~~~~~-~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~ 246 (842)
+|+++++.+.... +.... ..+.+.+.||++++++.++++.. ++ +.+... .+++..++++
T Consensus 550 -~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~-~~----~~v~~~----------~~~~~~~i~a 613 (690)
T 3k30_A 550 -EVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA-GG----VTVRDT----------YASIERELEC 613 (690)
T ss_dssp -EEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET-TE----EEEEET----------TTCCEEEEEC
T ss_pred -eeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC-Ce----EEEEEc----------cCCeEEEEEC
Confidence 5999998864211 11222 33456788999999999999973 22 222211 1334568999
Q ss_pred CEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 247 NYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 247 D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|.||+|+|++ |+..+.+.+ +.. +. +|+.|+||++|||+. +..+..|+.||+.||.+|.++|.+.
T Consensus 614 D~VV~A~G~~-p~~~l~~~l-~~~----~~--------~t~~~~VyaiGD~~~-~~~~~~A~~~g~~aa~~i~~~l~g~ 677 (690)
T 3k30_A 614 DAVVMVTARL-PREELYLDL-VAR----RD--------AGEIASVRGIGDAWA-PGTIAAAVWSGRRAAEEFDAVLPSN 677 (690)
T ss_dssp SEEEEESCEE-ECCHHHHHH-HHH----HH--------HTSCSEEEECGGGTS-CBCHHHHHHHHHHHHHHTTCCCCCT
T ss_pred CEEEECCCCC-CChHHHHHH-hhh----hc--------ccCCCCEEEEeCCCc-hhhHHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999 677777654 111 11 789999999999986 4567779999999999998776554
No 88
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.86 E-value=1.2e-21 Score=213.19 Aligned_cols=168 Identities=20% Similarity=0.209 Sum_probs=143.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCC-CCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHG-MGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~-~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
.|+++||. |.+++++.+++++++++ +|+||||++||.. ....++|+++.++++++.++++++++.+++||+||+++.
T Consensus 59 ~~~~~QL~-g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 59 RNVAVQIF-GSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp TTEEEEEE-CSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEEeC-CCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 79999997 78899999999999998 9999999999953 244678999999999999999999999999999999886
Q ss_pred hh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEE
Q psy16199 643 IT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPIL 720 (842)
Q Consensus 643 ~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi 720 (842)
++ +..++++.+++.|+|+|+++++.. .+++++++. +++++++++ ++|||
T Consensus 137 ~~~~~~~~~a~~l~~~G~d~i~v~g~~~----------------------~~~~~~~~~----~~~i~~i~~---~ipVi 187 (318)
T 1vhn_A 137 WEKNEVEEIYRILVEEGVDEVFIHTRTV----------------------VQSFTGRAE----WKALSVLEK---RIPTF 187 (318)
T ss_dssp SSSCCHHHHHHHHHHTTCCEEEEESSCT----------------------TTTTSSCCC----GGGGGGSCC---SSCEE
T ss_pred CChHHHHHHHHHHHHhCCCEEEEcCCCc----------------------cccCCCCcC----HHHHHHHHc---CCeEE
Confidence 54 556999999999999999975421 234555443 455666666 69999
Q ss_pred EecCcCCHHHHHHHHH-hCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 721 GIGGIDSADVALQFIQ-AGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 721 ~~GGI~t~~da~~~l~-~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
++|||.|++|+.++++ .|||+||+||+++ .+|+++.++.+.+
T Consensus 188 ~~GgI~s~~da~~~l~~~gad~V~iGR~~l-~~P~l~~~~~~~~ 230 (318)
T 1vhn_A 188 VSGDIFTPEDAKRALEESGCDGLLVARGAI-GRPWIFKQIKDFL 230 (318)
T ss_dssp EESSCCSHHHHHHHHHHHCCSEEEESGGGT-TCTTHHHHHHHHH
T ss_pred EECCcCCHHHHHHHHHcCCCCEEEECHHHH-hCcchHHHHHHHH
Confidence 9999999999999999 7999999999999 5699998887643
No 89
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.86 E-value=1.2e-21 Score=226.56 Aligned_cols=214 Identities=15% Similarity=0.125 Sum_probs=143.7
Q ss_pred ccCCCEEEEccCCCCCCCCCCCCCCcccc-Cceehhcch---HH----HhhcccCCccCCCCCCCCCCCCCcEEEEcCCh
Q psy16199 86 KDGYTAIFIGIGKPNANVIPIFQGLTEEM-GFYTSKTFL---PR----VATSSKKGLCGGCKKESLPILKGTVIVLGAGD 157 (842)
Q Consensus 86 ~~~yd~lVlAtGs~~~~~~~i~~G~~~~~-gv~~~~~~l---~~----~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~ 157 (842)
++.||+||||||+. ++.+++| |+.+.. .+.+..+.+ +. +..+.... ..+ .......+++|||||+
T Consensus 155 ~i~YD~LViAtGs~-~~~~~ip-G~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~---~~~--~~~~~~~~vvVvGgG~ 227 (502)
T 4g6h_A 155 EIKYDYLISAVGAE-PNTFGIP-GVTDYGHFLKEIPNSLEIRRTFAANLEKANLLP---KGD--PERRRLLSIVVVGGGP 227 (502)
T ss_dssp EEECSEEEECCCCE-ECCTTCT-THHHHCEECSSHHHHHHHHHHHHHHHHHHHHSC---TTC--HHHHHHTEEEEECCSH
T ss_pred EEeCCEEEEcCCcc-cccCCcc-CcccccCCCCCHHHHHHHHHHHHHHHHHHhccc---ccc--hhhccccceEEECCCc
Confidence 45699999999998 8888898 654322 111211111 11 11110000 000 0000012499999999
Q ss_pred hHHHHHHHHHHcCC-------------cEEEEEEeecCccccCCHHHH-----HHHHhcCcEEecCCCceEEEccCCcEE
Q psy16199 158 TAFDCATSALRCGA-------------NKVLVVFRKGCTNIRAVPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIA 219 (842)
Q Consensus 158 ~g~e~A~~l~~~G~-------------~~Vtlv~r~~~~~~~~~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~ 219 (842)
+|+|+|.+|...+. .+|+++++.++ .++..++.+ +.+.+.||++++++.++++. .++.+.
T Consensus 228 tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~-il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~-~~~~~~ 305 (502)
T 4g6h_A 228 TGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI-VLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVE-EKQLLA 305 (502)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS-SSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEC-SSEEEE
T ss_pred chhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc-cccCCCHHHHHHHHHHHHhcceeeecCceEEEEe-CCceEE
Confidence 99999999875431 25999999885 566665543 34667899999999999995 332222
Q ss_pred EEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCC---hhHHhhcCCcccCCCCCeeeCCCCCCC-CCCCeEEec
Q psy16199 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD---NDVLEAIKPVKLDKYGYPEVNYTTMAT-SVPGVFCGG 295 (842)
Q Consensus 220 ~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~---~~l~~~l~gl~~~~~G~i~vd~~~~~T-s~~gVfa~G 295 (842)
.... ++|. ..+.++++|+||||+|.+ |+ ..+...+ ++..+.+|+|.|| ++++| +.|+|||+|
T Consensus 306 ~~~~------~dg~-----~~~~~i~ad~viwa~Gv~-~~~~~~~l~~~~-~~~~~~~g~I~Vd-~~lq~~~~~~IfAiG 371 (502)
T 4g6h_A 306 KTKH------EDGK-----ITEETIPYGTLIWATGNK-ARPVITDLFKKI-PEQNSSKRGLAVN-DFLQVKGSNNIFAIG 371 (502)
T ss_dssp EEEC------TTSC-----EEEEEEECSEEEECCCEE-CCHHHHHHHHHS-GGGTTCCSSEEBC-TTSBBTTCSSEEECG
T ss_pred EEEe------cCcc-----cceeeeccCEEEEccCCc-CCHHHHhHHHhc-cccccCCCceeEC-CccccCCCCCEEEEE
Confidence 1111 1221 134579999999999999 44 3454555 6777888999999 57877 899999999
Q ss_pred cCCC--CchhHHHHHHHHHHHHHHHHHHH
Q psy16199 296 DTAN--LSDTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 296 D~~~--~~~~~~~A~~~G~~aA~~I~~~L 322 (842)
||+. .|.+.+.|.+||+.+|.||.+..
T Consensus 372 D~a~~~~p~~a~~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 372 DNAFAGLPPTAQVAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp GGEESSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 9964 35789999999999999998754
No 90
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.85 E-value=5.7e-22 Score=229.36 Aligned_cols=237 Identities=16% Similarity=0.218 Sum_probs=162.4
Q ss_pred hcCcEEEeceeecc-----ccceeccccccCCCEEEEccCCCCCCCCCCCCCCc-c-ccCceehh---cchHHHhhcccC
Q psy16199 63 DLGVKIECERSLST-----RDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLT-E-EMGFYTSK---TFLPRVATSSKK 132 (842)
Q Consensus 63 ~~gV~i~~~~~v~~-----~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~-~-~~gv~~~~---~~l~~~~~~~~~ 132 (842)
+.||++++++.+.. +.|+++++..+.||+||||||++ |+.++++++.. + .+++++.. ++.. +...
T Consensus 102 ~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~-p~~~~~~~~~~~~~~~~v~~~~~~~d~~~-l~~~--- 176 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGT-PRSLSAIDRAGAEVKSRTTLFRKIGDFRS-LEKI--- 176 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEE-ECCCHHHHTSCHHHHHTEEECCSHHHHHH-HHHH---
T ss_pred cCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCC-CCCCCCcccccccccCceEEEcCHHHHHH-HHHH---
Confidence 56899999865531 34566666567799999999998 77777653211 1 23444321 2111 1110
Q ss_pred CccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHH----cCCcEEEEEEeecCccccCCHHH-----HHHHHhcCcEEe
Q psy16199 133 GLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALR----CGANKVLVVFRKGCTNIRAVPEE-----VQLAWEEKCEFL 203 (842)
Q Consensus 133 ~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~----~G~~~Vtlv~r~~~~~~~~~~~~-----~~~~~~~gV~i~ 203 (842)
...+++|+|||||++|+|+|..|.+ .|. +|+++++.+....+..+.+ .+.+.+.||+++
T Consensus 177 -----------~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~-~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~ 244 (493)
T 1m6i_A 177 -----------SREVKSITIIGGGFLGSELACALGRKARALGT-EVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVM 244 (493)
T ss_dssp -----------HHHCSEEEEECCSHHHHHHHHHHHHHHHHHTC-EEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred -----------hhcCCeEEEECCCHHHHHHHHHHHhhhhhcCC-EEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEE
Confidence 1124569999999999999999987 465 4999988753222222222 234567899999
Q ss_pred cCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCC-CCCeeeCCC
Q psy16199 204 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDK-YGYPEVNYT 282 (842)
Q Consensus 204 ~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~-~G~i~vd~~ 282 (842)
+++.++++...++.+ .|++.+ | .+++||.||+++|.+ |+..+++.+ |+++++ +|+|.|| +
T Consensus 245 ~~~~V~~i~~~~~~~-~v~l~d-------------G--~~i~aD~Vv~a~G~~-pn~~l~~~~-gl~~~~~~ggi~Vd-~ 305 (493)
T 1m6i_A 245 PNAIVQSVGVSSGKL-LIKLKD-------------G--RKVETDHIVAAVGLE-PNVELAKTG-GLEIDSDFGGFRVN-A 305 (493)
T ss_dssp CSCCEEEEEEETTEE-EEEETT-------------S--CEEEESEEEECCCEE-ECCTTHHHH-TCCBCTTTCSEECC-T
T ss_pred eCCEEEEEEecCCeE-EEEECC-------------C--CEEECCEEEECCCCC-ccHHHHHHc-CCccccCCCcEEEC-C
Confidence 999999997444443 354432 2 278999999999999 677788777 888885 6889999 5
Q ss_pred CCCCCCCCeEEeccCCCCc---------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCceeeccc
Q psy16199 283 TMATSVPGVFCGGDTANLS---------DTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHID 344 (842)
Q Consensus 283 ~~~Ts~~gVfa~GD~~~~~---------~~~~~A~~~G~~aA~~I~~~L~~~~~~~~~~~~~~p~~~t~i~ 344 (842)
+++| .|+|||+|||+..+ .++..|+.||+.||.+|.. . ..++ ...|+||+++.
T Consensus 306 ~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g----~-~~~~---~~~~~~~s~~~ 367 (493)
T 1m6i_A 306 ELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG----A-AKPY---WHQSMFWSDLG 367 (493)
T ss_dssp TCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTS----C-CCCC---CCCCEEEEESS
T ss_pred Cccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcC----C-CCCc---CCcCceeeeec
Confidence 7888 69999999997532 2466899999999999852 1 2222 34678888653
No 91
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.85 E-value=1.1e-21 Score=223.56 Aligned_cols=274 Identities=14% Similarity=0.089 Sum_probs=177.6
Q ss_pred eeecceeEeecC-CCCcc--ccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc----ccceeccccccCCCEEEEc
Q psy16199 23 CLSKDLPDIERP-VAALP--DSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST----RDITIEKLRKDGYTAIFIG 95 (842)
Q Consensus 23 ~~g~~V~l~Ek~-~~GG~--~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~~~~~~~~~yd~lVlA 95 (842)
..|++|+|+|+. ..... +..-......+.++.....+++++.||+++.++.... +.++++++..+.||+||||
T Consensus 28 ~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviA 107 (437)
T 3sx6_A 28 GSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIA 107 (437)
T ss_dssp GGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEEC
T ss_pred CCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEEC
Confidence 469999999996 32111 1111112223344444556777889999987754431 3455666656779999999
Q ss_pred cCCCCCCCCCCCCCCccc-c---CceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhH------HHHH--
Q psy16199 96 IGKPNANVIPIFQGLTEE-M---GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA------FDCA-- 163 (842)
Q Consensus 96 tGs~~~~~~~i~~G~~~~-~---gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g------~e~A-- 163 (842)
||+. ++.+++| |+... . .+++..+.+........ ....++++|||+|++| +|+|
T Consensus 108 tG~~-~~~~~ip-G~~~~~~~~~~~~~~~~a~~~~~~~~~------------~~~~~~~vVVGgG~~~g~~G~~~E~a~~ 173 (437)
T 3sx6_A 108 TGPK-LAFENVP-GSDPHEGPVQSICTVDHAERAFAEYQA------------LLREPGPIVIGAMAGASCFGPAYEYAMI 173 (437)
T ss_dssp CCCE-ECGGGST-TCSTTTSSEECCSSHHHHHHHHHHHHH------------HHHSCCCEEEEECTTCCCCHHHHHHHHH
T ss_pred CCCC-cCcccCC-CCCcccCcceecccccHHHHHHHHHHH------------HHhCCCEEEEEcCCCCCcCcHHHHHHHH
Confidence 9998 7777887 65432 1 23333333222111000 0012347889986654 7777
Q ss_pred --HHHHHcCCc---E-EEEEEeecCcc---cc---CCHHHH-HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccC
Q psy16199 164 --TSALRCGAN---K-VLVVFRKGCTN---IR---AVPEEV-QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNE 230 (842)
Q Consensus 164 --~~l~~~G~~---~-Vtlv~r~~~~~---~~---~~~~~~-~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~ 230 (842)
..+.+.|.+ + ||++++.+... ++ .....+ +.+.+.||++++++.++++.. + . +.+.+. +.
T Consensus 174 la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~-~-~---v~~~~~--~~ 246 (437)
T 3sx6_A 174 VASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVED-N-K---MYVTQV--DE 246 (437)
T ss_dssp HHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEET-T-E---EEEEEE--CT
T ss_pred HHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEEC-C-e---EEEEec--cc
Confidence 556677764 2 99999886320 11 122223 445678999999999999963 2 2 334332 11
Q ss_pred CCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCC-CCCCeEEeccCCCC---------
Q psy16199 231 KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMAT-SVPGVFCGGDTANL--------- 300 (842)
Q Consensus 231 ~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~T-s~~gVfa~GD~~~~--------- 300 (842)
+|. .++..++++|.|++++|++ +...+.+.. |+ .+++|+|.||+ +++| ++|+|||+|||+..
T Consensus 247 ~g~----~~~~~~i~~D~vv~~~g~~-~~~~~~~~~-gl-~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~ 318 (437)
T 3sx6_A 247 KGE----TIKEMVLPVKFGMMIPAFK-GVPAVAGVE-GL-CNPGGFVLVDE-HQRSKKYANIFAAGIAIAIPPVETTPVP 318 (437)
T ss_dssp TSC----EEEEEEEECSEEEEECCEE-CCHHHHTST-TT-BCTTSCBCBCT-TSBBSSCTTEEECGGGBCCCCSCCCSSC
T ss_pred CCc----cccceEEEEeEEEEcCCCc-Cchhhhccc-cc-cCCCCcEEeCh-hccCCCCCCEEEEEEEeccCCcCCCcCC
Confidence 221 1124679999999999998 555554433 66 67889999995 7888 99999999999752
Q ss_pred ---chhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 301 ---SDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 301 ---~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
+++.+.|..||+.||.||.++|++.
T Consensus 319 ~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 319 TGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999764
No 92
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.84 E-value=1.3e-20 Score=216.22 Aligned_cols=217 Identities=16% Similarity=0.154 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHhcCcE--EEeceeecc-----c----cceecc---c--cccCCCEEEEccC--CCCCCCCCCCCCCcc
Q psy16199 51 FDAVNFEVELVKDLGVK--IECERSLST-----R----DITIEK---L--RKDGYTAIFIGIG--KPNANVIPIFQGLTE 112 (842)
Q Consensus 51 ~~~v~~~~~~l~~~gV~--i~~~~~v~~-----~----~v~~~~---~--~~~~yd~lVlAtG--s~~~~~~~i~~G~~~ 112 (842)
.++.++..++++++|++ +++++.|.. . .|++++ + ....||+||+||| +. |+.+++| |+..
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~-p~~p~ip-G~~~ 178 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFST-PYVPEFE-GFEK 178 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSS-BCCCCCB-TTTT
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCC-CccCCCC-Cccc
Confidence 36677777888888987 888876532 1 344433 1 3456999999999 55 7878888 7655
Q ss_pred ccC-ceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHH
Q psy16199 113 EMG-FYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEE 191 (842)
Q Consensus 113 ~~g-v~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~ 191 (842)
.++ ++++.++.... ...+++|+|||+|++|+|+|..|++.|.+ |+++++++.. ++..
T Consensus 179 ~~g~~~hs~~~~~~~-----------------~~~~k~VvVVG~G~sg~eiA~~l~~~g~~-V~li~~~~~~-~~~~--- 236 (464)
T 2xve_A 179 FGGRILHAHDFRDAL-----------------EFKDKTVLLVGSSYSAEDIGSQCYKYGAK-KLISCYRTAP-MGYK--- 236 (464)
T ss_dssp CCSEEEEGGGCCCGG-----------------GGTTSEEEEECCSTTHHHHHHHHHHTTCS-EEEEECSSCC-CCCC---
T ss_pred CCceEEehhhhCCHh-----------------HcCCCEEEEEcCCCCHHHHHHHHHHhCCe-EEEEEECCCC-CCCC---
Confidence 555 55555443210 12244599999999999999999999865 9999988642 2211
Q ss_pred HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCccc
Q psy16199 192 VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271 (842)
Q Consensus 192 ~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~ 271 (842)
...||+++ ..|+++. + + +|++.+ |+ ++++|.||+|||++ |+..++....|+.+
T Consensus 237 ----~~~~V~~~--~~V~~i~-~-~---~V~~~d-------------G~--~i~~D~Vi~atG~~-p~~~~l~~~~gl~~ 289 (464)
T 2xve_A 237 ----WPENWDER--PNLVRVD-T-E---NAYFAD-------------GS--SEKVDAIILCTGYI-HHFPFLNDDLRLVT 289 (464)
T ss_dssp ----CCTTEEEC--SCEEEEC-S-S---EEEETT-------------SC--EEECSEEEECCCBC-CCCTTBCTTTCCCC
T ss_pred ----CCCceEEc--CCeEEEe-C-C---EEEECC-------------CC--EEeCCEEEECCCCC-CCCCCcCccccccc
Confidence 12578877 5777774 2 2 244432 33 58999999999999 67666655227887
Q ss_pred CCCCCe-eeCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 272 DKYGYP-EVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 272 ~~~G~i-~vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+++|++ ......+.|+.|+|||+||+..+ .....|..||+.+|.++.
T Consensus 290 ~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~ 337 (464)
T 2xve_A 290 NNRLWPLNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIM 337 (464)
T ss_dssp CSSSCCSSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHT
T ss_pred CCCcccccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHc
Confidence 776565 22223467999999999999864 467788899999888873
No 93
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.84 E-value=2.9e-20 Score=206.42 Aligned_cols=226 Identities=12% Similarity=0.038 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHhcCcEEEeceeecc-------ccceeccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcchH
Q psy16199 52 DAVNFEVELVKDLGVKIECERSLST-------RDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLP 124 (842)
Q Consensus 52 ~~v~~~~~~l~~~gV~i~~~~~v~~-------~~v~~~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~ 124 (842)
++..+..+++++.|+++++++.|.. ..+..++. .+.||+||||||+. ++ +.+| + ..++++.++..
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~-~~-p~ip-~----~~~~~~~~~~~ 160 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY-NF-PKKP-F----KYGIHYSEIED 160 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST-TS-BCCC-S----SSCEEGGGCSC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC-Cc-cCCC-C----CceechhhcCC
Confidence 4556667777889999999875531 11222222 35699999999997 43 3455 2 23444433321
Q ss_pred HHhhcccCCccCCCCCCCCCCCCC-cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcccc-------CCH---HHH-
Q psy16199 125 RVATSSKKGLCGGCKKESLPILKG-TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIR-------AVP---EEV- 192 (842)
Q Consensus 125 ~~~~~~~~~~c~~c~~~~~~~~~~-kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~-------~~~---~~~- 192 (842)
. ...++ +|+|||+|++|+|+|..|.+.|. +||++++++....+ ..+ ..+
T Consensus 161 ~------------------~~~~~~~vvVvG~G~~g~e~a~~l~~~g~-~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~ 221 (369)
T 3d1c_A 161 F------------------DNFNKGQYVVIGGNESGFDAAYQLAKNGS-DIALYTSTTGLNDPDADPSVRLSPYTRQRLG 221 (369)
T ss_dssp G------------------GGSCSSEEEEECCSHHHHHHHHHHHHTTC-EEEEECC----------CTTSCCHHHHHHHH
T ss_pred h------------------hhcCCCEEEEECCCcCHHHHHHHHHhcCC-eEEEEecCCCCCCCCCCCCccCCHHHHHHHH
Confidence 1 22234 59999999999999999999986 59999988642211 111 122
Q ss_pred HHHHhcC-cEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCccc
Q psy16199 193 QLAWEEK-CEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKL 271 (842)
Q Consensus 193 ~~~~~~g-V~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~ 271 (842)
+.+.+.| |++++++.++++...++. ..|++.+ |+ ....+|.||+++|++ |+.+++... +++
T Consensus 222 ~~l~~~g~v~~~~~~~v~~i~~~~~~-~~v~~~~-------------g~-~~~~~d~vi~a~G~~-~~~~~~~~~-~~~- 283 (369)
T 3d1c_A 222 NVIKQGARIEMNVHYTVKDIDFNNGQ-YHISFDS-------------GQ-SVHTPHEPILATGFD-ATKNPIVQQ-LFV- 283 (369)
T ss_dssp HHHHTTCCEEEECSCCEEEEEEETTE-EEEEESS-------------SC-CEEESSCCEECCCBC-GGGSHHHHH-HSC-
T ss_pred HHHhhCCcEEEecCcEEEEEEecCCc-eEEEecC-------------Ce-EeccCCceEEeeccC-Cccchhhhh-hcc-
Confidence 2234565 999999999999633332 2354432 22 234579999999999 566444443 355
Q ss_pred CCCCCeeeCCCCCCCCCCCeEEeccCCCCc----hhHHHHHHHHHHHHHHHHHHH
Q psy16199 272 DKYGYPEVNYTTMATSVPGVFCGGDTANLS----DTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 272 ~~~G~i~vd~~~~~Ts~~gVfa~GD~~~~~----~~~~~A~~~G~~aA~~I~~~L 322 (842)
+++|++.||+.+++|+.|+|||+|||+..+ ..+..+..||+.+|.+|...+
T Consensus 284 ~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 284 TTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHT
T ss_pred CCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhccc
Confidence 778999999777899999999999997643 234567788888888887654
No 94
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.82 E-value=1.2e-20 Score=212.55 Aligned_cols=275 Identities=12% Similarity=0.081 Sum_probs=170.5
Q ss_pred ccccCceeeecceeEeecCCC-Cc--cccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc----ccceeccccccC
Q psy16199 16 EMSTAKVCLSKDLPDIERPVA-AL--PDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST----RDITIEKLRKDG 88 (842)
Q Consensus 16 ~~~~~~~~~g~~V~l~Ek~~~-GG--~~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~~~~~~~~~ 88 (842)
|...++...+.+|+|+|++.. .. ++.. +.....+.+.+....+.+.+.||+++.++.+.. +.+.++++.++.
T Consensus 18 A~~L~~~~~~~~Vtlie~~~~~~~~p~~~~-v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~ 96 (401)
T 3vrd_B 18 AKYIKLADPSIEVTLIEPNETYYTCYMSNE-VIGGDRELASLRVGYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFA 96 (401)
T ss_dssp HHHHHHHCTTSEEEEECSCSSEECSTTHHH-HHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEE
T ss_pred HHHHHhcCcCCeEEEEeCCCCCCCccCHHH-HhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEEccCcEEEecccceee
Confidence 334445555679999999732 11 1111 111111222222233456678999998875432 446666777778
Q ss_pred CCEEEEccCCCCCCCCCCCCCCcccc---Ccee--hhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCCh------
Q psy16199 89 YTAIFIGIGKPNANVIPIFQGLTEEM---GFYT--SKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGD------ 157 (842)
Q Consensus 89 yd~lVlAtGs~~~~~~~i~~G~~~~~---gv~~--~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~------ 157 (842)
||+||||||+. ++.+++| |+.+.. .+++ ..+....+.+... ....+..+|+++|.
T Consensus 97 yd~LviAtG~~-~~~~~i~-G~~e~~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~~~v~~~~~~~i~~~ 162 (401)
T 3vrd_B 97 YDRCVVAPGID-LLYDKIE-GYSEALAAKLPHAWKAGEQTALLRRQLE------------SMDDGGVVIIAPPAPPFRCP 162 (401)
T ss_dssp CSEEEECCCEE-ECGGGSB-TCCSGGGGTSCCCSSCSHHHHHHHHHHH------------HSCTTCEEEEECCSSSCBCT
T ss_pred cceeeeccCCc-cccCCcc-CchhhcccCccceeccHHHHHHHHHHHH------------hcccCCcEEEecCCccEEee
Confidence 99999999998 7777887 654321 1211 1111111111100 11223444444332
Q ss_pred -----hHHHHHHHHHHcCC-cEEEEEEeecCcc-ccCCHHHHHH-----HHhcCcEEecCCCceEEEccCCcEEEEEEEe
Q psy16199 158 -----TAFDCATSALRCGA-NKVLVVFRKGCTN-IRAVPEEVQL-----AWEEKCEFLPFMSPVQVDVKDNKIAGMQFNR 225 (842)
Q Consensus 158 -----~g~e~A~~l~~~G~-~~Vtlv~r~~~~~-~~~~~~~~~~-----~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~ 225 (842)
.++++|..+.+.+. .+|+++++.+... .+..++.+.. +.+.||++++++.+..+...... ..+++.
T Consensus 163 ~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~-~~v~~~- 240 (401)
T 3vrd_B 163 PGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA-MTVETS- 240 (401)
T ss_dssp THHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT-TEEEET-
T ss_pred hHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc-eEEEcC-
Confidence 34567777766664 3589988775321 1222333333 23569999999999888632222 123332
Q ss_pred ecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCC-CCCCCeEEeccCCCC---c
Q psy16199 226 TEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMA-TSVPGVFCGGDTANL---S 301 (842)
Q Consensus 226 ~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~-Ts~~gVfa~GD~~~~---~ 301 (842)
+| +++++|+|++++|.+ ++ .+++.. |+ .+++|+|.||+.+++ |++|||||+|||+.. +
T Consensus 241 ------------~g--~~i~~D~vi~~~g~~-~~-~~~~~~-gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~p 302 (401)
T 3vrd_B 241 ------------FG--ETFKAAVINLIPPQR-AG-KIAQSA-SL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMP 302 (401)
T ss_dssp ------------TS--CEEECSEEEECCCEE-EC-HHHHHT-TC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSC
T ss_pred ------------CC--cEEEeeEEEEecCcC-Cc-hhHhhc-cc-cccCCCEEECCCcceecCCCCEEEecccccCCCCC
Confidence 22 379999999999999 44 466665 67 578899999977664 899999999999753 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 302 DTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 302 ~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
++.+.|..||+.+|.||.+.|+++
T Consensus 303 k~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 303 KSAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp BSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHHHHHHhcCC
Confidence 789999999999999999999875
No 95
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.81 E-value=1.5e-18 Score=190.23 Aligned_cols=164 Identities=16% Similarity=0.152 Sum_probs=137.4
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC---
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN--- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~--- 642 (842)
.++|.++|+++.++|+|+||||.+| |++. ....||+++..+++++.+++++|++++++||.||++++
T Consensus 143 i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~ 222 (338)
T 1z41_A 143 VQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYT 222 (338)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccC
Confidence 4789999999999999999999886 8654 33458889989999999999999999999999999884
Q ss_pred -----hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 643 -----ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 643 -----~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
.++..++++.+++.|+|+|.++++.... ...| .++ ...+++++++++.+ ++
T Consensus 223 ~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~-------~~~~-------------~~~---~~~~~~~~~ir~~~-~i 278 (338)
T 1z41_A 223 DKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH-------ADIN-------------VFP---GYQVSFAEKIREQA-DM 278 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC-------CCCC-------------CCT---TTTHHHHHHHHHHH-CC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-------CCCC-------------CCc---cchHHHHHHHHHHC-CC
Confidence 4478899999999999999998753210 0000 111 12478889999998 79
Q ss_pred cEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 718 PILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
|||++|||.|++++.++|+.| ||+|++||+++.+ |+++.++.+++.
T Consensus 279 PVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~n-Pdl~~ki~~~~~ 325 (338)
T 1z41_A 279 ATGAVGMITDGSMAEEILQNGRADLIFIGRELLRD-PFFARTAAKQLN 325 (338)
T ss_dssp EEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHC-TTHHHHHHHHTT
T ss_pred CEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhC-chHHHHHHcCCC
Confidence 999999999999999999998 9999999999964 999999988864
No 96
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.81 E-value=4.9e-20 Score=208.13 Aligned_cols=260 Identities=13% Similarity=0.120 Sum_probs=171.1
Q ss_pred eeeecceeEeecC-CCCccc--cccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc----ccceeccccc----cCCC
Q psy16199 22 VCLSKDLPDIERP-VAALPD--SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST----RDITIEKLRK----DGYT 90 (842)
Q Consensus 22 ~~~g~~V~l~Ek~-~~GG~~--~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~~~~~~~----~~yd 90 (842)
...|++|+|+|++ ..+... ....+....+.++.....+.+++.|++++.++.+.. +.+++++... +.||
T Consensus 24 ~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d 103 (409)
T 3h8l_A 24 VGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYD 103 (409)
T ss_dssp HGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECS
T ss_pred CCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCC
Confidence 3479999999997 433321 111222233444555556677888999998854331 2355544432 6799
Q ss_pred EEEEccCCCCCCCCCCCCCCccc-cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCCh------------
Q psy16199 91 AIFIGIGKPNANVIPIFQGLTEE-MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGD------------ 157 (842)
Q Consensus 91 ~lVlAtGs~~~~~~~i~~G~~~~-~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~------------ 157 (842)
+||+|||+. ++.+++| |+.+. ..+.+..+........ ....++++|||+|.
T Consensus 104 ~lViAtG~~-~~~~~ip-G~~~~~~~~~~~~~~~~~~~~l--------------~~~~~~~vViG~G~f~~~~~~~~~~p 167 (409)
T 3h8l_A 104 YVIVGIGAH-LATELVK-GWDKYGYSVCEPEFATKLREKL--------------ESFQGGNIAIGSGPFYQGHNPKPKVP 167 (409)
T ss_dssp EEEECCCCE-ECGGGSB-THHHHCEESSSTTHHHHHHHHH--------------HHCCSEEEEEEECCBCCCCSSCCBSC
T ss_pred EEEECCCCC-cCccCCC-ChhhcCcCcCCHHHHHHHHHHH--------------HHhcCCeEEEEecccccCCCcccccc
Confidence 999999997 7777777 64331 1222222222111110 11235577999992
Q ss_pred -------------hHHHHHH----HHHHcCC---cEEEEEEeecCccccCCHHH-----HHHHHhcCcEEecCCCceEEE
Q psy16199 158 -------------TAFDCAT----SALRCGA---NKVLVVFRKGCTNIRAVPEE-----VQLAWEEKCEFLPFMSPVQVD 212 (842)
Q Consensus 158 -------------~g~e~A~----~l~~~G~---~~Vtlv~r~~~~~~~~~~~~-----~~~~~~~gV~i~~~~~v~~v~ 212 (842)
.++|+|. .+.+.|. .+|+++++.+ .++..++. .+.+.+.||++++++.++++.
T Consensus 168 ~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~ 245 (409)
T 3h8l_A 168 ENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE--YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIR 245 (409)
T ss_dssp TTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS--SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEEC
T ss_pred ccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc--cccccCHHHHHHHHHHHHHCCCEEEcCCceEEEC
Confidence 4677774 4455663 2699999876 34433332 234567799999999999996
Q ss_pred ccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcc-cCCCCCeeeCCCCCCC-CCCC
Q psy16199 213 VKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVK-LDKYGYPEVNYTTMAT-SVPG 290 (842)
Q Consensus 213 ~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~-~~~~G~i~vd~~~~~T-s~~g 290 (842)
. + . |++.+ | .++++|.||+++|+. ++. +++.+ |.. .+++|++.|| ++++| +.|+
T Consensus 246 ~-~-~---v~~~~-------------g--~~~~~D~vi~a~G~~-~~~-~l~~~-~~~l~~~~G~i~vd-~~~~~~~~~~ 301 (409)
T 3h8l_A 246 E-H-E---IVDEK-------------G--NTIPADITILLPPYT-GNP-ALKNS-TPDLVDDGGFIPTD-LNMVSIKYDN 301 (409)
T ss_dssp S-S-E---EEETT-------------S--CEEECSEEEEECCEE-CCH-HHHTS-CGGGSCTTSCBCBB-TTSBBSSCTT
T ss_pred C-C-e---EEECC-------------C--CEEeeeEEEECCCCC-ccH-HHHhc-cccCcCCCCCEEeC-cccccCCCCC
Confidence 2 2 2 33432 2 268999999999999 554 55544 333 3678999999 58888 9999
Q ss_pred eEEeccCCC--CchhHHHHHHHHHHHHHHHHHHHH
Q psy16199 291 VFCGGDTAN--LSDTTVESVNDGKTAAWHIHKYIQ 323 (842)
Q Consensus 291 Vfa~GD~~~--~~~~~~~A~~~G~~aA~~I~~~L~ 323 (842)
|||+|||+. .+.++..|..||+.||.+|.++|.
T Consensus 302 vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 302 VYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp EEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 999999985 467889999999999999999884
No 97
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.81 E-value=3.6e-19 Score=213.55 Aligned_cols=230 Identities=13% Similarity=0.184 Sum_probs=166.0
Q ss_pred ecceeEeecC-CCCccccc--cCCCCCCCHHHHHHHHHHHHhcCcEEEeceeeccccceecccccc-CCCEEEEccCCCC
Q psy16199 25 SKDLPDIERP-VAALPDSS--EIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKD-GYTAIFIGIGKPN 100 (842)
Q Consensus 25 g~~V~l~Ek~-~~GG~~~~--~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~~~v~~~~~~~~-~yd~lVlAtGs~~ 100 (842)
|++|+|+|+. .+||++.+ .+|......+++++..+++++.||++++++.+.. . .. .||+||||||+.
T Consensus 396 g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-----~---~~~~~d~lviAtG~~- 466 (671)
T 1ps9_A 396 GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-----D---QLQAFDETILASGIV- 466 (671)
T ss_dssp TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS-----S---SSCCSSEEEECCCEE-
T ss_pred CCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH-----H---HhhcCCEEEEccCCC-
Confidence 8999999996 89998643 4565544456777788888999999999987751 1 22 699999999997
Q ss_pred CCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHcCC---------
Q psy16199 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGA--------- 171 (842)
Q Consensus 101 ~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~--------- 171 (842)
|+.+++| |. +..++++..++++. ....+++|+|||||++|+|+|..|.+.|.
T Consensus 467 p~~~~i~-G~-~~~~v~~~~~~l~~-----------------~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~ 527 (671)
T 1ps9_A 467 PRTPPID-GI-DHPKVLSYLDVLRD-----------------KAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGF 527 (671)
T ss_dssp ECCCCCB-TT-TSTTEEEHHHHHTS-----------------CCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHH
T ss_pred cCCCCCC-CC-CCCcEeeHHHHhhC-----------------CCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhh
Confidence 8888888 64 44678776554431 02234569999999999999999998773
Q ss_pred ---------------------------cEEEEEEeecCccccC----CHH-HHHHHHhcCcEEecCCCceEEEccCCcEE
Q psy16199 172 ---------------------------NKVLVVFRKGCTNIRA----VPE-EVQLAWEEKCEFLPFMSPVQVDVKDNKIA 219 (842)
Q Consensus 172 ---------------------------~~Vtlv~r~~~~~~~~----~~~-~~~~~~~~gV~i~~~~~v~~v~~~~~~v~ 219 (842)
.+|+++++.+...... ... ..+.+.+.||++++++.++++. ++ .
T Consensus 528 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~-~~-~-- 603 (671)
T 1ps9_A 528 CNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID-DD-G-- 603 (671)
T ss_dssp HHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE-TT-E--
T ss_pred hhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe-CC-e--
Confidence 2467776654221111 111 2345678899999999999986 33 2
Q ss_pred EEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC
Q psy16199 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN 299 (842)
Q Consensus 220 ~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~ 299 (842)
+++.. +|+..++++|.||+++|++ |+.++++.+ + +..++||++|||+.
T Consensus 604 -v~~~~------------~G~~~~i~~D~Vi~a~G~~-p~~~l~~~l-----~-------------~~g~~v~aiGD~~~ 651 (671)
T 1ps9_A 604 -LHVVI------------NGETQVLAVDNVVICAGQE-PNRALAQPL-----I-------------DSGKTVHLIGGCDV 651 (671)
T ss_dssp -EEEEE------------TTEEEEECCSEEEECCCEE-ECCTTHHHH-----H-------------TTTCCEEECGGGTC
T ss_pred -EEEec------------CCeEEEEeCCEEEECCCcc-ccHHHHHHH-----H-------------hcCCCEEEECCcCc
Confidence 33321 3455689999999999999 677776643 1 11268999999976
Q ss_pred Cc-hhHHHHHHHHHHHHHHH
Q psy16199 300 LS-DTTVESVNDGKTAAWHI 318 (842)
Q Consensus 300 ~~-~~~~~A~~~G~~aA~~I 318 (842)
.. ..+..|+.||+.+|.+|
T Consensus 652 ~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 652 AMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CSSCCHHHHHHHHHHHHHHC
T ss_pred cCchhHHHHHHHHHHHHHhC
Confidence 43 36899999999999875
No 98
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.81 E-value=1.4e-20 Score=214.17 Aligned_cols=273 Identities=12% Similarity=0.092 Sum_probs=173.0
Q ss_pred ccccCceeeecceeEeecC-CCCcccc--ccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc----ccceeccccccC
Q psy16199 16 EMSTAKVCLSKDLPDIERP-VAALPDS--SEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST----RDITIEKLRKDG 88 (842)
Q Consensus 16 ~~~~~~~~~g~~V~l~Ek~-~~GG~~~--~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~~~~~~~~~ 88 (842)
|...++...|++|+|+|++ ..++... .-......+.++.....+.+++.|++++.++.... +.++++++..+.
T Consensus 18 A~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~ 97 (430)
T 3h28_A 18 AYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIE 97 (430)
T ss_dssp HHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEE
T ss_pred HHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEE
Confidence 3444444468999999997 5554321 10111122223333334556678999988754321 235555555567
Q ss_pred CCEEEEccCCCCCCCCCCCCCCcc---ccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhH------
Q psy16199 89 YTAIFIGIGKPNANVIPIFQGLTE---EMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTA------ 159 (842)
Q Consensus 89 yd~lVlAtGs~~~~~~~i~~G~~~---~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g------ 159 (842)
||+||+|||+. +..+ |+.. ...+.+..+.+........ ....++++|||+|++|
T Consensus 98 ~d~liiAtG~~-~~~p----g~~~~g~~~~~~~~~~a~~~~~~~~~------------~~~~~~~vVVGgG~~~~~~G~~ 160 (430)
T 3h28_A 98 YDYLVIATGPK-LVFG----AEGQEENSTSICTAEHALETQKKLQE------------LYANPGPVVIGAIPGVSCFGPA 160 (430)
T ss_dssp CSEEEECCCCE-EECC----SBTHHHHSCCCSSHHHHHHHHHHHHH------------HHHSCCCEEEEECTTCCCCHHH
T ss_pred CCEEEEcCCcc-cccC----CCCCcCCccCcCCHHHHHHHHHHHHH------------HHhcCCeEEEEcCCCCCcCcHH
Confidence 99999999998 4432 3211 1224443333332111000 0012347888987654
Q ss_pred HHHH----HHHHHcCCc---EEEEEEeecCcc---cc---CCHHHH-HHHHhcCcEEecCCCceEEEccCCcEEEEEEEe
Q psy16199 160 FDCA----TSALRCGAN---KVLVVFRKGCTN---IR---AVPEEV-QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNR 225 (842)
Q Consensus 160 ~e~A----~~l~~~G~~---~Vtlv~r~~~~~---~~---~~~~~~-~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~ 225 (842)
+|+| ..+.+.|.+ +|+++++.+... ++ .....+ +.+.+.||++++++.++++.. +. +++.+
T Consensus 161 ~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~---v~~~~ 235 (430)
T 3h28_A 161 YEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK---VIYED 235 (430)
T ss_dssp HHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE---EEEEC
T ss_pred HHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce---EEEEe
Confidence 8877 455566642 499998876320 11 112233 446678999999999999962 22 34443
Q ss_pred ecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhc-CCcccCCCC-CeeeCCCCCCC-CCCCeEEeccCCCC--
Q psy16199 226 TEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI-KPVKLDKYG-YPEVNYTTMAT-SVPGVFCGGDTANL-- 300 (842)
Q Consensus 226 ~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l-~gl~~~~~G-~i~vd~~~~~T-s~~gVfa~GD~~~~-- 300 (842)
. +++..++++|.|++++|++ ++..+ ..+ .|+ .+++| +|.||+ +++| ++|+|||+|||+..
T Consensus 236 ~-----------~~~g~~i~~D~vv~a~G~~-~~~~l-~~~~~gl-~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~ 300 (430)
T 3h28_A 236 L-----------NGNTHEVPAKFTMFMPSFQ-GPEVV-ASAGDKV-ANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp T-----------TSCEEEEECSEEEEECEEE-CCHHH-HTTCTTT-BCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCCC
T ss_pred c-----------CCCceEEeeeEEEECCCCc-cchhH-hhccccC-cCCCCCEEecCc-cccCCCCCCEEEEEeeeccCC
Confidence 2 1334689999999999999 55444 443 367 67889 999995 7887 99999999999763
Q ss_pred ----------chhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 301 ----------SDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 301 ----------~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|++.+.|..||+.||.||.++|+++
T Consensus 301 ~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 301 IEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 5689999999999999999999764
No 99
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.80 E-value=4.3e-20 Score=210.02 Aligned_cols=276 Identities=13% Similarity=0.093 Sum_probs=166.0
Q ss_pred cccccCceeeecceeEeecC-CCC---ccccccCCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc----ccceeccccc
Q psy16199 15 IEMSTAKVCLSKDLPDIERP-VAA---LPDSSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLST----RDITIEKLRK 86 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~-~~G---G~~~~~iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~----~~v~~~~~~~ 86 (842)
+|...++...+++|||+|++ +.. ++..... ....+.++.....+.+++.||+++.++.... +.|+++++.+
T Consensus 17 aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~-g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~ 95 (430)
T 3hyw_A 17 TAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAM-GWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKK 95 (430)
T ss_dssp HHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHH-TCSCGGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCE
T ss_pred HHHHHhccCcCCeEEEEcCCCCCccCccHHHHhc-CCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCE
Confidence 34445555567899999996 211 1110000 0111222222223446678999998875431 5577777777
Q ss_pred cCCCEEEEccCCCCCCCCCCCCCCccc-cCceehhcchHHHhhcccCCccCCCCCCCCCCCCCc-EEEEcCCh------h
Q psy16199 87 DGYTAIFIGIGKPNANVIPIFQGLTEE-MGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGD------T 158 (842)
Q Consensus 87 ~~yd~lVlAtGs~~~~~~~i~~G~~~~-~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~k-VvVIGgG~------~ 158 (842)
+.||+||||||++ + .+++| |+.+. ..+.+..+.+...+... ....++ ++|+||+. .
T Consensus 96 i~YD~LViAtG~~-~-~~~i~-G~~e~~~~~~~~~~a~~~~~~l~-------------~~~~~~~~vv~gg~~gve~~~~ 159 (430)
T 3hyw_A 96 IEYDYLVIATGPK-L-VFGAE-GQEENSTSICTAEHALETQKKLQ-------------ELYANPGPVVIGAIPGVSCFGP 159 (430)
T ss_dssp EECSEEEECCCCE-E-ECCSB-THHHHSCCCSSHHHHHHHHHHHH-------------HHHHSCCCEEEEECTTCCCCHH
T ss_pred EECCEEEEeCCCC-c-cCCcc-CcccCcCCcccHHHHHHHHHHHH-------------hhccCCceEEEeCCCcEEEhHH
Confidence 7899999999997 4 35677 54332 23444433332211110 001223 55665542 2
Q ss_pred HHHH----HHHHHHcCCc---EEEEEEeecCcc--ccCC----HHHH-HHHHhcCcEEecCCCceEEEccCCcEEEEEEE
Q psy16199 159 AFDC----ATSALRCGAN---KVLVVFRKGCTN--IRAV----PEEV-QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFN 224 (842)
Q Consensus 159 g~e~----A~~l~~~G~~---~Vtlv~r~~~~~--~~~~----~~~~-~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~ 224 (842)
+.|+ +..+.+.|.. +|++++..+... .+.. ...+ +.+.++||++++++.+++++ .++ +.+.
T Consensus 160 ~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~---~~~~ 234 (430)
T 3hyw_A 160 AYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIE--PDK---VIYE 234 (430)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEEC--SSE---EEEE
T ss_pred HHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEe--CCc---eEEE
Confidence 2233 3344455532 377776654210 1111 1223 33567899999999999985 333 3333
Q ss_pred eecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCC-CCCCCeEEeccCCCC---
Q psy16199 225 RTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMA-TSVPGVFCGGDTANL--- 300 (842)
Q Consensus 225 ~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~-Ts~~gVfa~GD~~~~--- 300 (842)
+. +|+..++++|+|++++|.+ ++..+.....++..+.+|++.|| +++| |++|+|||+|||+..
T Consensus 235 ~~-----------~g~~~~i~~d~vi~~~G~~-~~~~~~~~~~~l~~~~~g~i~vd-~~lq~t~~~~IfAiGD~a~~p~~ 301 (430)
T 3hyw_A 235 DL-----------NGNTHEVPAKFTMFMPSFQ-GPEVVASAGDKVANPANKMVIVN-RCFQNPTYKNIFGVGVVTAIPPI 301 (430)
T ss_dssp CT-----------TSCEEEEECSEEEEECEEE-CCHHHHTTCTTTBCTTTCCBCCC-TTSBCSSSTTEEECSTTBCCCCS
T ss_pred ee-----------CCCceEeecceEEEeccCC-CchHHHhcccccccCCceEEEec-ccccCCCCCCEEEeccEEecCCc
Confidence 32 3556789999999999999 45433332112444566788888 5776 999999999999742
Q ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 301 ---------SDTTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 301 ---------~~~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|++.+.|..||+.+|.||.+.|+++
T Consensus 302 ~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 302 EKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4678899999999999999999764
No 100
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.80 E-value=9.6e-19 Score=191.13 Aligned_cols=164 Identities=16% Similarity=0.117 Sum_probs=138.3
Q ss_pred HhHHHHHHHHHhhcCcCEEEEecc---------CCCCCC-CCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC---
Q psy16199 576 KDDWLELSKKTEKAGADALELNLS---------CPHGMG-ERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN--- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~s---------cP~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~--- 642 (842)
.++|.++|+++.++|+|+||||.+ ||++.. ...||+++..+++++.+++++|++.++.||.||++++
T Consensus 143 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~ 222 (340)
T 3gr7_A 143 VQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYH 222 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 579999999999999999999988 595543 3458999999999999999999999999999999985
Q ss_pred -----hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 643 -----ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 643 -----~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
.++..++++.+++.|+|.|.+++..... . .. ..+ ....+++++++++.+ ++
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-----~--~~-------------~~~---~~~~~~~~~~ik~~~-~i 278 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP-----A--RM-------------NVY---PGYQVPFAELIRREA-DI 278 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC-----C--CC-------------CCC---TTTTHHHHHHHHHHT-TC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC-----C--CC-------------CCC---ccccHHHHHHHHHHc-CC
Confidence 5689999999999999999998742110 0 00 011 112478899999998 79
Q ss_pred cEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 718 PILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
|||++|||.|++++.++|+.| ||+|++||+++. +|+++.++.+++.
T Consensus 279 PVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la-nPdl~~ki~~~l~ 325 (340)
T 3gr7_A 279 PTGAVGLITSGWQAEEILQNGRADLVFLGRELLR-NPYWPYAAARELG 325 (340)
T ss_dssp CEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH-CTTHHHHHHHHTT
T ss_pred cEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh-CchHHHHHHHHCC
Confidence 999999999999999999998 999999999995 5999999988864
No 101
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.80 E-value=6.9e-19 Score=192.31 Aligned_cols=196 Identities=13% Similarity=0.120 Sum_probs=137.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCC--CCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP--HGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP--~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p 641 (842)
.++|++|++..+.++..+++ +..+||++++|++.. ..+.+++ .+.+.+.+.++++++.+++||++|...
T Consensus 145 ~~~ianig~~~~~e~~~~~v---e~~~adal~ihln~~qe~~~p~Gd------~~~~~~~~~I~~l~~~~~~PVivK~vg 215 (365)
T 3sr7_A 145 LLLATNIGLDKPYQAGLQAV---RDLQPLFLQVHINLMQELLMPEGE------REFRSWKKHLSDYAKKLQLPFILKEVG 215 (365)
T ss_dssp CCEEEEEETTSCHHHHHHHH---HHHCCSCEEEEECHHHHHTSSSSC------CCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred CcEEEEeCCCCCHHHHHHHH---HhcCCCEEEEeccccccccCCCCC------CcHHHHHHHHHHHHHhhCCCEEEEECC
Confidence 78999998766666444444 445899999998743 2222222 556678899999999999999999653
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
+....+.|+.+.++|+|+|+++|+ +++....++..+.... .....+ | .| +...+.+++...+++|||+
T Consensus 216 -~g~s~e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~~~--~~~~~~----g---~p-t~~~L~~v~~~~~~ipvia 283 (365)
T 3sr7_A 216 -FGMDVKTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGGNR--SYLNQW----G---QT-TAQVLLNAQPLMDKVEILA 283 (365)
T ss_dssp -SCCCHHHHHHHHHHTCCEEECCCB-C--------------C--GGGTTC----S---CB-HHHHHHHHGGGTTTSEEEE
T ss_pred -CCCCHHHHHHHHHcCCCEEEEeCC-CCcccchhhccccccc--cccccc----c---cc-HHHHHHHHHHhcCCCeEEE
Confidence 334457899999999999999998 5554445553211100 000011 1 12 2344555554444699999
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEehhhhc----cC----chhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQICSAVQN----QD----FTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ta~l~----~g----p~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
+|||+++.|+.++|++||++||+||++++ .| ..+++.++++|+.+|...|+ +++|++..
T Consensus 284 ~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~~ 351 (365)
T 3sr7_A 284 SGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRNV 351 (365)
T ss_dssp CSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGGC
T ss_pred eCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccC
Confidence 99999999999999999999999999995 45 35788999999999999999 99999864
No 102
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.80 E-value=2.3e-19 Score=207.55 Aligned_cols=226 Identities=14% Similarity=0.039 Sum_probs=164.4
Q ss_pred cceeEeecC-CCCcccccc------CCCCCCCHHHHHHHHHHHHhcCcEEEeceeecc-----cccee---ccc--cccC
Q psy16199 26 KDLPDIERP-VAALPDSSE------IPQYRLPFDAVNFEVELVKDLGVKIECERSLST-----RDITI---EKL--RKDG 88 (842)
Q Consensus 26 ~~V~l~Ek~-~~GG~~~~~------iP~~~~~~~~v~~~~~~l~~~gV~i~~~~~v~~-----~~v~~---~~~--~~~~ 88 (842)
++|+|+|+. .+||.+... ++. .+.+++.+..+++ +.++++++++.+.. +.+.+ ++. ..+.
T Consensus 131 ~~V~vie~~~~~GG~~~~~~~~~~g~~~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 207 (493)
T 1y56_A 131 LTVALIEERGWLGGDMWLKGIKQEGFNK--DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEIL 207 (493)
T ss_dssp CCEEEECTTSSSSCSGGGTCSEETTTTE--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEE
T ss_pred CCEEEEeCCCCCCCeeeccccccCCCCC--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEE
Confidence 899999997 789986532 222 2345555555555 66899998887632 11111 222 2457
Q ss_pred CCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHH
Q psy16199 89 YTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALR 168 (842)
Q Consensus 89 yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~ 168 (842)
||+||||||+. ++.+++| |. +.+++++..++....+.. .....++++|||+|++|+|
T Consensus 208 ~d~lvlAtGa~-~~~~~~~-g~-~~~gv~~~~~~~~~~~~~-------------~~~~~~~vvViGgG~~gle------- 264 (493)
T 1y56_A 208 AKRVVLATGAI-DSTMLFE-NN-DMPGVFRRDFALEVMNVW-------------EVAPGRKVAVTGSKADEVI------- 264 (493)
T ss_dssp ESCEEECCCEE-ECCCCCT-TT-TSTTEEEHHHHHHHHHTS-------------CBCSCSEEEEESTTHHHHH-------
T ss_pred CCEEEECCCCC-ccCCCCC-CC-CCCCEEEcHHHHHHHHhc-------------ccCCCCEEEEECCCHHHHH-------
Confidence 99999999998 8888888 64 678898876655433211 0122345999999999998
Q ss_pred cCCcEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCE
Q psy16199 169 CGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANY 248 (842)
Q Consensus 169 ~G~~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~ 248 (842)
+.+.+.||++++++.++++. .++++..+.+.+ | .++++|.
T Consensus 265 ------------------------~~l~~~GV~v~~~~~v~~i~-~~~~v~~v~~~~-------------g--~~i~aD~ 304 (493)
T 1y56_A 265 ------------------------QELERWGIDYVHIPNVKRVE-GNEKVERVIDMN-------------N--HEYKVDA 304 (493)
T ss_dssp ------------------------HHHHHHTCEEEECSSEEEEE-CSSSCCEEEETT-------------C--CEEECSE
T ss_pred ------------------------HHHHhCCcEEEeCCeeEEEe-cCCceEEEEeCC-------------C--eEEEeCE
Confidence 34567899999999999997 444554454321 2 3799999
Q ss_pred EEEccccCcCChhHHhhcCCccc--CCCCCee-eCCCCCCCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy16199 249 IISAFGSTLLDNDVLEAIKPVKL--DKYGYPE-VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322 (842)
Q Consensus 249 Vi~a~G~~~~~~~l~~~l~gl~~--~~~G~i~-vd~~~~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~~~L 322 (842)
||+++|.+ |+.++++.+ |+++ +++|++. +| ++++ +.|+|||+|||+.. ..+..|..||+.||.+|...+
T Consensus 305 Vv~a~G~~-p~~~l~~~~-g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 305 LIFADGRR-PDINPITQA-GGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSI-KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EEECCCEE-ECCHHHHHT-TCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCcC-cCchHHHhc-CCCccccCCceeeccc-cccC-cCCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHHHc
Confidence 99999999 677888876 7665 5678887 67 6778 99999999999864 568899999999999998865
No 103
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.75 E-value=1.3e-17 Score=183.17 Aligned_cols=165 Identities=18% Similarity=0.206 Sum_probs=137.3
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCCC-CCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGMG-ERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~- 642 (842)
.++|.++|+++.++|+|+||||.+| |++.. ...||.++..+.+++.+++++||+.+ ++||.||++++
T Consensus 151 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~ 230 (349)
T 3hgj_A 151 LQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc
Confidence 5799999999999999999999998 96543 34589999999999999999999998 79999999983
Q ss_pred -------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC
Q psy16199 643 -------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP 715 (842)
Q Consensus 643 -------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~ 715 (842)
.++..++++.+++.|+|.|.+++..... . ...| .+ ....+++++++++.+
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-----~-~~~~-------------~~---~~~~~~~~~~ir~~~- 287 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL-----R-VRIP-------------LA---PGFQVPFADAVRKRV- 287 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS-----S-SCCC-------------CC---TTTTHHHHHHHHHHH-
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCc-----c-cccC-------------CC---ccccHHHHHHHHHHc-
Confidence 4578899999999999999998631100 0 0000 01 113478889999988
Q ss_pred CCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 716 NFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 716 ~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
++|||++|||.|++++.++|+.| ||+|+++|+++. +|+++.++.++|.
T Consensus 288 ~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la-nPdl~~k~~~~l~ 336 (349)
T 3hgj_A 288 GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR-DPYFPLRAAKALG 336 (349)
T ss_dssp CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH-CTTHHHHHHHHTT
T ss_pred CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh-CchHHHHHHHHCC
Confidence 79999999999999999999999 999999999995 6999999988764
No 104
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.75 E-value=1.8e-18 Score=197.58 Aligned_cols=215 Identities=16% Similarity=0.090 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHhcCcEEEeceeecc-------ccceecc---cc---ccCCCEEEEccCCC-CCCCCCCCCCCccc----
Q psy16199 52 DAVNFEVELVKDLGVKIECERSLST-------RDITIEK---LR---KDGYTAIFIGIGKP-NANVIPIFQGLTEE---- 113 (842)
Q Consensus 52 ~~v~~~~~~l~~~gV~i~~~~~v~~-------~~v~~~~---~~---~~~yd~lVlAtGs~-~~~~~~i~~G~~~~---- 113 (842)
++.++..++++++++.+++++.|.. ..|++.+ +. ...||+||+|||+. .|+.+++| |+...
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~-G~~~~~~~~ 194 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIK-GLDEYAKAV 194 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCB-THHHHHHHS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCC-ChhhhhccC
Confidence 4556666777777878888887642 1244433 33 45799999999984 26666777 64332
Q ss_pred cC-ceehhcchHHHhhcccCCccCCCCCCCCCC-CCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHHH
Q psy16199 114 MG-FYTSKTFLPRVATSSKKGLCGGCKKESLPI-LKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEE 191 (842)
Q Consensus 114 ~g-v~~~~~~l~~~~~~~~~~~c~~c~~~~~~~-~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~~ 191 (842)
++ ++++.++... .. ..++|+|||+|++|+|+|..|++.|.+.|++++|++..
T Consensus 195 ~g~v~~~~~~~~~------------------~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-------- 248 (447)
T 2gv8_A 195 PGSVLHSSLFREP------------------ELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-------- 248 (447)
T ss_dssp TTSEEEGGGCCCG------------------GGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------
T ss_pred CccEEEecccCCh------------------hhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------
Confidence 22 4554443321 22 23459999999999999999999975449999987632
Q ss_pred HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhH-----Hhhc
Q psy16199 192 VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDV-----LEAI 266 (842)
Q Consensus 192 ~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l-----~~~l 266 (842)
+...||.+ ...|+++..+++ +|++.+ |+ .++++|.||+|||++ ++..| ++.+
T Consensus 249 ---l~~~~i~~--~~~v~~~~~~~~---~v~~~d-------------G~-~~~~~D~vi~atG~~-~~~~~l~~~~l~~~ 305 (447)
T 2gv8_A 249 ---IQNESLQQ--VPEITKFDPTTR---EIYLKG-------------GK-VLSNIDRVIYCTGYL-YSVPFPSLAKLKSP 305 (447)
T ss_dssp ---CBCSSEEE--ECCEEEEETTTT---EEEETT-------------TE-EECCCSEEEECCCBC-CCCCCHHHHSCCST
T ss_pred ---CCCCCeEE--ecCeEEEecCCC---EEEECC-------------CC-EeccCCEEEECCCCC-cCCCCCcccccccc
Confidence 33456664 456777753222 344432 32 347899999999999 67666 4432
Q ss_pred CCcccCCCCCeeeCCCCC---CCCCCCeEEeccCCCCchhHHHHHHHHHHHHHHHH
Q psy16199 267 KPVKLDKYGYPEVNYTTM---ATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 267 ~gl~~~~~G~i~vd~~~~---~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~~I~ 319 (842)
+..+..++.+.++ .+. .++.|+||++||+.... ....|..||+.+|.++.
T Consensus 306 -~~~i~~~~~~~~~-~~~~v~~~~~p~l~~~G~~~~~~-~~~~a~~qa~~~a~~~~ 358 (447)
T 2gv8_A 306 -ETKLIDDGSHVHN-VYQHIFYIPDPTLAFVGLALHVV-PFPTSQAQAAFLARVWS 358 (447)
T ss_dssp -TTCCCSSSSSCCS-EETTTEETTCTTEEESSCCBSSC-HHHHHHHHHHHHHHHHT
T ss_pred -cCceecCCCcccc-cccccccCCCCcEEEEecccccc-CchHHHHHHHHHHHHHc
Confidence 1122223444444 223 37999999999997653 67889999999999874
No 105
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.75 E-value=5.8e-19 Score=193.78 Aligned_cols=220 Identities=15% Similarity=0.150 Sum_probs=152.4
Q ss_pred cceEEEecc----C-CCHhHHHHHHHHHhhcCcCEEEEeccC--CCCCCCCCCcccCCCCHH-HHHHHHHHHHhhCCccE
Q psy16199 564 SILIASIMC----T-YNKDDWLELSKKTEKAGADALELNLSC--PHGMGERGMGLACGQDPE-MVRNISLWVRSSVKIPF 635 (842)
Q Consensus 564 ~pvi~si~~----g-~~~e~~~~~a~~~~~agaD~ielN~sc--P~~~~~~~~G~~~~~~~~-~~~~ii~~v~~~~~~Pv 635 (842)
.|+++++++ + ++.+...++++++ ++|+++||+.. -..++.++ .+.. .+.+.++++++.+++||
T Consensus 120 ~~~~anlg~~ql~~~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~------~~~~~~~~~~i~~i~~~~~vPV 190 (368)
T 3vkj_A 120 IPIIANLGMPQLVKGYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGE------PEYQIYALEKLRDISKELSVPI 190 (368)
T ss_dssp SCEEEEEEGGGGGTTCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCC------CBCBTHHHHHHHHHHTTCSSCE
T ss_pred cceecCcCeeecCCCCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCC------chhhHHHHHHHHHHHHHcCCCE
Confidence 689999876 4 6677777777776 35666666541 11111111 2333 47889999999999999
Q ss_pred EEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCc---ccCCCccccCCCCCCccccchHHHHHHHHh
Q psy16199 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA---VGTKKLTTYGGVSGNATRPMGLKAVSSIAK 712 (842)
Q Consensus 636 ~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~---~~~~~~~~~gG~sG~~~~p~al~~v~~i~~ 712 (842)
++|..... ...+.|+.+.++|+|+|+++|+ +++...+++..+... ..........+++ .| +...+.++++
T Consensus 191 ivK~vG~g-~s~~~A~~l~~aGad~I~V~g~-GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g----~p-t~~~l~~v~~ 263 (368)
T 3vkj_A 191 IVKESGNG-ISMETAKLLYSYGIKNFDTSGQ-GGTNWIAIEMIRDIRRGNWKAESAKNFLDWG----VP-TAASIMEVRY 263 (368)
T ss_dssp EEECSSSC-CCHHHHHHHHHTTCCEEECCCB-TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCS----CB-HHHHHHHHHH
T ss_pred EEEeCCCC-CCHHHHHHHHhCCCCEEEEeCC-CCCcccchhhhhcccccccchhhcccccccc----cc-HHHHHHHHHH
Confidence 99964211 1257799999999999999998 444344333110000 0000000111222 22 2455677888
Q ss_pred hCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc---cCc----hhHHHHHHHHHHHHHhcCC-CccccCCCCCCC
Q psy16199 713 MFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN---QDF----TVVDDYITGLQTLLYLKST-QLKGWDGQSPPT 784 (842)
Q Consensus 713 ~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~---~gp----~~~~~i~~~l~~~m~~~g~-~i~~~~~~~~~~ 784 (842)
.++++|||++|||+++.|+.+++++||++|++||++++ .|+ .+++.+.++|+.+|...|+ +++|+++.
T Consensus 264 ~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~---- 339 (368)
T 3vkj_A 264 SVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKT---- 339 (368)
T ss_dssp HSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTC----
T ss_pred HcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccC----
Confidence 88679999999999999999999999999999999995 566 4788999999999999999 99999854
Q ss_pred ccccCCCCCCcchhhccCCC
Q psy16199 785 PVHQKGKPAYQFRDKEGKAI 804 (842)
Q Consensus 785 ~~~~~g~~~~~~~~~~g~~~ 804 (842)
....+|. +.+|++.||+++
T Consensus 340 ~l~~~~~-l~~~~~~r~~~~ 358 (368)
T 3vkj_A 340 SIVILGK-LKEWAEYRGINL 358 (368)
T ss_dssp CEEECHH-HHHHHHHHTCCH
T ss_pred CEEechh-HHHHHHHcCCCh
Confidence 3444453 677888888864
No 106
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.75 E-value=8.6e-18 Score=192.80 Aligned_cols=237 Identities=10% Similarity=0.105 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHhcCcEEEeceeecc---c---------cceecccc----ccCCCEEEEccCCCCCCCCCCCCCCcccc-
Q psy16199 52 DAVNFEVELVKDLGVKIECERSLST---R---------DITIEKLR----KDGYTAIFIGIGKPNANVIPIFQGLTEEM- 114 (842)
Q Consensus 52 ~~v~~~~~~l~~~gV~i~~~~~v~~---~---------~v~~~~~~----~~~yd~lVlAtGs~~~~~~~i~~G~~~~~- 114 (842)
++.++.....+++++++++++.|.. . .++..++. .+.||+||||||+. |+.++...++ ...
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~-p~~p~~~~~~-~~~~ 205 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT-PRIPQVFRAL-KGDG 205 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE-ECCCGGGGGG-TTCT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC-CCCcchhhhc-CCCC
Confidence 4445555566677899998886542 1 22223332 45699999999996 6544422121 112
Q ss_pred CceehhcchHHHhhcccCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCccccCC----
Q psy16199 115 GFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTNIRAV---- 188 (842)
Q Consensus 115 gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~~~~~---- 188 (842)
.++++.+++....... ......++|+|||||++|+|+|..|.+. + .+|++++|++. .+|..
T Consensus 206 ~~~~~~~~~~~~~~~~-----------~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~-~~Vt~v~r~~~-~~p~~~~~~ 272 (463)
T 3s5w_A 206 RVFHHSQYLEHMAKQP-----------CSSGKPMKIAIIGGGQSAAEAFIDLNDSYPS-VQADMILRASA-LKPADDSPF 272 (463)
T ss_dssp TEEEGGGHHHHHCC------------------CEEEEEECCSHHHHHHHHHHHHHCTT-EEEEEECSSSS-CCBCCCCHH
T ss_pred cEEECHHHHhhHHHhh-----------hcccCCCeEEEECCCHhHHHHHHHHHhcCCC-CeEEEEEeCCC-CcCccCCcc
Confidence 4566666655331100 0001234499999999999999999998 6 46999999874 22211
Q ss_pred -----------------HHH----HHHHHh--------------------------cCcEEecCCCceEEEccCCcEEEE
Q psy16199 189 -----------------PEE----VQLAWE--------------------------EKCEFLPFMSPVQVDVKDNKIAGM 221 (842)
Q Consensus 189 -----------------~~~----~~~~~~--------------------------~gV~i~~~~~v~~v~~~~~~v~~V 221 (842)
++. +..+.. .||++++++.++++...++. ..|
T Consensus 273 ~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~-~~v 351 (463)
T 3s5w_A 273 VNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG-IEL 351 (463)
T ss_dssp HHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE-EEE
T ss_pred chhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE-EEE
Confidence 000 111111 59999999999999754443 346
Q ss_pred EEEeecccCCCCeeccCCceEEEECCEEEEccccCcCC--hhHHhhcCCcccCCCCCeeeCCCCCCCC-----CCCeEEe
Q psy16199 222 QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD--NDVLEAIKPVKLDKYGYPEVNYTTMATS-----VPGVFCG 294 (842)
Q Consensus 222 ~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~--~~l~~~l~gl~~~~~G~i~vd~~~~~Ts-----~~gVfa~ 294 (842)
.+.+. .+|+..++++|.||+|||++ |+ ..++..+ +..+ |++.||+ ++++. .++||++
T Consensus 352 ~~~~~----------~~g~~~~~~~D~Vv~AtG~~-p~~~~~~l~~l-~~~~---g~i~v~~-~~~~~~~~~~~~~Ifa~ 415 (463)
T 3s5w_A 352 ALRDA----------GSGELSVETYDAVILATGYE-RQLHRQLLEPL-AEYL---GDHEIGR-DYRLQTDERCKVAIYAQ 415 (463)
T ss_dssp EEEET----------TTCCEEEEEESEEEECCCEE-CCC-CTTTGGG-GGGB---C--CCCT-TSBCCBCTTBCSEEEES
T ss_pred EEEEc----------CCCCeEEEECCEEEEeeCCC-CCCccchhHHH-HHHh---CCcccCc-ccccccCCCCCCeEEEc
Confidence 66542 13556679999999999999 45 4565554 2222 7888984 55543 5679999
Q ss_pred ccCCC-----CchhHHHHHHHHHHHHHHHHH
Q psy16199 295 GDTAN-----LSDTTVESVNDGKTAAWHIHK 320 (842)
Q Consensus 295 GD~~~-----~~~~~~~A~~~G~~aA~~I~~ 320 (842)
|||.. .+.....|+.++++++..+.+
T Consensus 416 G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~ 446 (463)
T 3s5w_A 416 GFSQASHGLSDTLLSVLPVRAEEISGSLYQH 446 (463)
T ss_dssp SCCHHHHCTTTTSSTTHHHHHHHHHHHHHHH
T ss_pred CCCcccCCcCccchhHHHHHHHHHHHHHHhh
Confidence 99953 234556777888776555443
No 107
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.74 E-value=6.2e-17 Score=179.55 Aligned_cols=187 Identities=16% Similarity=0.182 Sum_probs=145.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCC----------------CCCCC---------------Cccc
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHG----------------MGERG---------------MGLA 612 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~----------------~~~~~---------------~G~~ 612 (842)
.|+.+|+....+.+...+++++++++|+++|.||+.||.. ...+. -|..
T Consensus 147 ~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~ 226 (392)
T 2nzl_A 147 ALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSG 226 (392)
T ss_dssp SEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------C
T ss_pred CcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcch
Confidence 6889999755678889999999999999999999999942 10001 0110
Q ss_pred ---CCC---CHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCC
Q psy16199 613 ---CGQ---DPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTK 686 (842)
Q Consensus 613 ---~~~---~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~ 686 (842)
+.. +++...+.++++++.+++||++|...+ .+.|+.+.++|+|+|+++|+.+.
T Consensus 227 ~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~----~e~A~~a~~aGad~I~vs~~ggr----------------- 285 (392)
T 2nzl_A 227 LAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILR----GDDAREAVKHGLNGILVSNHGAR----------------- 285 (392)
T ss_dssp HHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECC----HHHHHHHHHTTCCEEEECCGGGT-----------------
T ss_pred HHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCC----HHHHHHHHHcCCCEEEeCCCCCC-----------------
Confidence 111 666677889999999999999997643 46699999999999999886321
Q ss_pred CccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc----C----chhHH
Q psy16199 687 KLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ----D----FTVVD 757 (842)
Q Consensus 687 ~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~----g----p~~~~ 757 (842)
. ...| +..++.+.++++.++ ++|||++|||++++|+.++|++||++|+|||++++. | -.+++
T Consensus 286 --~---~~~g----~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~ 356 (392)
T 2nzl_A 286 --Q---LDGV----PATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLE 356 (392)
T ss_dssp --S---STTC----CCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred --c---CCCC----cChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHhcChHHHHHHHH
Confidence 0 0122 345888889988774 599999999999999999999999999999999953 1 24788
Q ss_pred HHHHHHHHHHHhcCC-CccccCCC
Q psy16199 758 DYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 758 ~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
.+.++|+.+|...|+ +++++++.
T Consensus 357 ~l~~el~~~m~~~G~~~i~el~~~ 380 (392)
T 2nzl_A 357 ILKEEFRLAMALSGCQNVKVIDKT 380 (392)
T ss_dssp HHHHHHHHHHHHHTCSBGGGCCGG
T ss_pred HHHHHHHHHHHHhCCCcHHHHhhh
Confidence 899999999999999 99998764
No 108
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.74 E-value=2.3e-17 Score=164.02 Aligned_cols=152 Identities=20% Similarity=0.187 Sum_probs=118.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc--------cCC-----HHHH-----HHHHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI--------RAV-----PEEV-----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~--------~~~-----~~~~-----~~~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||++|+++|..|.+.|.+ |+++++.+.... +.. +.++ +.+.+.|++++.+ .+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~-v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~ 80 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLK-VLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKG 80 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCc-EEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEE
Confidence 499999999999999999999975 999998763221 111 2222 2345679999999 9999
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCC
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPG 290 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~g 290 (842)
+...++.+ .+++. +| ++++|.||+|+|.. + .+.+.+ |++++ +|++.|| ++++|+.|+
T Consensus 81 i~~~~~~~-~v~~~-------------~g---~i~ad~vI~A~G~~-~--~~~~~~-g~~~~-~g~i~vd-~~~~t~~~~ 137 (180)
T 2ywl_A 81 VRDMGGVF-EVETE-------------EG---VEKAERLLLCTHKD-P--TLPSLL-GLTRR-GAYIDTD-EGGRTSYPR 137 (180)
T ss_dssp EEECSSSE-EEECS-------------SC---EEEEEEEEECCTTC-C--HHHHHH-TCCEE-TTEECCC-TTCBCSSTT
T ss_pred EEEcCCEE-EEEEC-------------CC---EEEECEEEECCCCC-C--CccccC-CCCcc-CceEEeC-CCCCcCCCC
Confidence 87433332 23221 22 68999999999998 4 355666 78888 8999999 689999999
Q ss_pred eEEeccCCCCch-hHHHHHHHHHHHHHHHHHHHHhc
Q psy16199 291 VFCGGDTANLSD-TTVESVNDGKTAAWHIHKYIQEK 325 (842)
Q Consensus 291 Vfa~GD~~~~~~-~~~~A~~~G~~aA~~I~~~L~~~ 325 (842)
|||+|||+..+. ++..|..||+.||.+|..++++.
T Consensus 138 i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 138 VYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp EEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhhc
Confidence 999999988665 88999999999999999998764
No 109
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.74 E-value=3.9e-17 Score=176.76 Aligned_cols=187 Identities=14% Similarity=0.165 Sum_probs=147.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCC-CCCCCCC---------------C--------ccc---CCCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP-HGMGERG---------------M--------GLA---CGQD 616 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP-~~~~~~~---------------~--------G~~---~~~~ 616 (842)
.|...|+..-.+.+...++.++++++|+.+|-+.+..| ...++++ + +.. -..|
T Consensus 122 ~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 201 (352)
T 3sgz_A 122 GFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPK 201 (352)
T ss_dssp CEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCC
T ss_pred ccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccC
Confidence 47788887666788889999999999999999999888 3222111 0 000 1235
Q ss_pred HHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCC
Q psy16199 617 PEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696 (842)
Q Consensus 617 ~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG 696 (842)
+...++.++++++.+++||++|...+ .+.|+.+.++|+|+|+++|+.+ + . +.+
T Consensus 202 ~~~~w~~i~~lr~~~~~PvivK~v~~----~e~A~~a~~~GaD~I~vsn~GG-~------------------~----~d~ 254 (352)
T 3sgz_A 202 ASFCWNDLSLLQSITRLPIILKGILT----KEDAELAMKHNVQGIVVSNHGG-R------------------Q----LDE 254 (352)
T ss_dssp TTCCHHHHHHHHHHCCSCEEEEEECS----HHHHHHHHHTTCSEEEECCGGG-T------------------S----SCS
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCc----HHHHHHHHHcCCCEEEEeCCCC-C------------------c----cCC
Confidence 66778899999999999999999865 3568999999999999998622 1 0 111
Q ss_pred CccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc----cCc----hhHHHHHHHHHHHH
Q psy16199 697 NATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN----QDF----TVVDDYITGLQTLL 767 (842)
Q Consensus 697 ~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~----~gp----~~~~~i~~~l~~~m 767 (842)
.|.+++.+.++++.+. ++|||++|||++++|+.++|++||++|||||++++ .|+ .+++.++++|+.+|
T Consensus 255 ---~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~m 331 (352)
T 3sgz_A 255 ---VSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCM 331 (352)
T ss_dssp ---SCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 2456899999988764 59999999999999999999999999999999995 233 47889999999999
Q ss_pred HhcCC-CccccCCC
Q psy16199 768 YLKST-QLKGWDGQ 780 (842)
Q Consensus 768 ~~~g~-~i~~~~~~ 780 (842)
...|+ +++|++..
T Consensus 332 ~~~G~~~i~el~~~ 345 (352)
T 3sgz_A 332 TLSGCQSVAEISPD 345 (352)
T ss_dssp HHHTCSBGGGCCGG
T ss_pred HHhCCCcHHHHhhh
Confidence 99999 99888643
No 110
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.73 E-value=2.6e-17 Score=181.40 Aligned_cols=187 Identities=17% Similarity=0.210 Sum_probs=147.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCC-CCCC----------------------CCCcccC---C--C
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPH-GMGE----------------------RGMGLAC---G--Q 615 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~-~~~~----------------------~~~G~~~---~--~ 615 (842)
.|+.+|+....+.+...+++++++++|+++|.||+.||- ...+ .+.|..+ . .
T Consensus 133 ~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~ 212 (368)
T 2nli_A 133 GPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGAS 212 (368)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTB
T ss_pred CCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhcc
Confidence 688999975567888999999999999999999999994 1110 1123333 2 2
Q ss_pred CHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCC
Q psy16199 616 DPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695 (842)
Q Consensus 616 ~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~s 695 (842)
++....+.++++++.+++||++|...+ .+.|+.+.++|+|+|+++|..+ + ....
T Consensus 213 d~~~~~~~i~~lr~~~~~PvivK~v~~----~e~a~~a~~~Gad~I~vs~~gg-r---------------------~~~~ 266 (368)
T 2nli_A 213 KQKISPRDIEEIAGHSGLPVFVKGIQH----PEDADMAIKRGASGIWVSNHGA-R---------------------QLYE 266 (368)
T ss_dssp CSBCCHHHHHHHHHHSSSCEEEEEECS----HHHHHHHHHTTCSEEEECCGGG-T---------------------SCSS
T ss_pred CchhhHHHHHHHHHHcCCCEEEEcCCC----HHHHHHHHHcCCCEEEEcCCCc-C---------------------CCCC
Confidence 666778889999999999999997532 4668999999999999988622 0 0112
Q ss_pred CCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc----Cc----hhHHHHHHHHHHH
Q psy16199 696 GNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ----DF----TVVDDYITGLQTL 766 (842)
Q Consensus 696 G~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~----gp----~~~~~i~~~l~~~ 766 (842)
| +..++.+.++++.++ ++|||++|||++++|+.++|++||++|+|||++++. |. ..++.+.++|+.+
T Consensus 267 g----~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~ 342 (368)
T 2nli_A 267 A----PGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLTRV 342 (368)
T ss_dssp C----CCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C----CChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 2 345888999988775 599999999999999999999999999999999964 22 5788899999999
Q ss_pred HHhcCC-CccccCCC
Q psy16199 767 LYLKST-QLKGWDGQ 780 (842)
Q Consensus 767 m~~~g~-~i~~~~~~ 780 (842)
|...|+ ++++++..
T Consensus 343 m~~~G~~~i~~l~~~ 357 (368)
T 2nli_A 343 MQLTGSQNVEDLKGL 357 (368)
T ss_dssp HHHHTCSSHHHHHTC
T ss_pred HHHhCCcCHHHhccc
Confidence 999999 99888754
No 111
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.72 E-value=3.7e-17 Score=178.13 Aligned_cols=159 Identities=16% Similarity=0.176 Sum_probs=132.2
Q ss_pred HhHHHHHHHHHhhcCcCEEEEe---------ccCCCCC-CCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC-
Q psy16199 576 KDDWLELSKKTEKAGADALELN---------LSCPHGM-GERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN---------~scP~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~- 642 (842)
.++|.++|+++.++|+|+|||| |.||++. ....||+++..+.+++.|++++||+.+ ++||.||++++
T Consensus 142 i~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~ 221 (343)
T 3kru_A 142 VKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD 221 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred HHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh
Confidence 5789999999999999999999 8899654 345589999999999999999999998 78999999984
Q ss_pred -------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC
Q psy16199 643 -------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP 715 (842)
Q Consensus 643 -------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~ 715 (842)
.++..++++.|+++ +|.|.+++.... . . ..+ .. ....+++++++++.+
T Consensus 222 ~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~----~-~--~~~--------~~--------~~~~~~~~~~ir~~~- 276 (343)
T 3kru_A 222 YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLL----N-V--DIN--------LY--------PGYQVKYAETIKKRC- 276 (343)
T ss_dssp SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSS----C-C--CCC--------CC--------TTTTHHHHHHHHHHH-
T ss_pred hhccCccHHHHHHHHHHhhcc-ccEEeccCCceE----e-e--eec--------cc--------CceeehHHHHHHHhc-
Confidence 45788999999999 999999642110 0 0 000 00 112478889999998
Q ss_pred CCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 716 NFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 716 ~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
++|||++|||.+++++.++|+.| ||+|++||+++. +|+++.++.
T Consensus 277 ~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la-nPdl~~k~~ 321 (343)
T 3kru_A 277 NIKTSAVGLITTQELAEEILSNERADLVALGRELLR-NPYWVLHTY 321 (343)
T ss_dssp TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHTC
T ss_pred CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc-CCeEEEEEe
Confidence 79999999999999999999988 999999999995 599999986
No 112
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.72 E-value=8.9e-17 Score=184.06 Aligned_cols=186 Identities=16% Similarity=0.154 Sum_probs=146.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCC-CCC------------------C---CCCccc---CC---C
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPH-GMG------------------E---RGMGLA---CG---Q 615 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~-~~~------------------~---~~~G~~---~~---~ 615 (842)
.|...|+..+.+.+...+++++++++|+++|.|+++||. ..+ . .+-+.. +. .
T Consensus 247 ~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~ 326 (511)
T 1kbi_A 247 QIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFI 326 (511)
T ss_dssp CCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTB
T ss_pred CCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhcc
Confidence 577888865678889999999999999999999999995 110 0 000111 11 4
Q ss_pred CHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCC
Q psy16199 616 DPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695 (842)
Q Consensus 616 ~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~s 695 (842)
++....++++++++.+++||++|...+ .+.|+.+.++|+|+|+++|..+ + .+ ..
T Consensus 327 d~~~~~~~i~~lr~~~~~PvivKgv~~----~e~A~~a~~aGad~I~vs~hgG-~-~~--------------------d~ 380 (511)
T 1kbi_A 327 DPSLTWKDIEELKKKTKLPIVIKGVQR----TEDVIKAAEIGVSGVVLSNHGG-R-QL--------------------DF 380 (511)
T ss_dssp CTTCCHHHHHHHHHHCSSCEEEEEECS----HHHHHHHHHTTCSEEEECCTTT-T-SS--------------------TT
T ss_pred ChHhHHHHHHHHHHHhCCcEEEEeCCC----HHHHHHHHHcCCCEEEEcCCCC-c-cC--------------------CC
Confidence 667778889999999999999997664 4668999999999999988522 1 00 01
Q ss_pred CCccccchHHHHHHHHhhC------CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCc---------hhHHHHH
Q psy16199 696 GNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF---------TVVDDYI 760 (842)
Q Consensus 696 G~~~~p~al~~v~~i~~~~------~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp---------~~~~~i~ 760 (842)
+ +..++.+.++++.+ +++|||++|||++++|+.++|++||++|+|||++++. . .+++.+.
T Consensus 381 ~----~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~-~~~~G~~gv~~~l~~l~ 455 (511)
T 1kbi_A 381 S----RAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYA-NSCYGRNGVEKAIEILR 455 (511)
T ss_dssp C----CCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred C----CchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHH-HHhcChHHHHHHHHHHH
Confidence 1 22477788877765 3699999999999999999999999999999999952 2 5788999
Q ss_pred HHHHHHHHhcCC-CccccCCC
Q psy16199 761 TGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 761 ~~l~~~m~~~g~-~i~~~~~~ 780 (842)
++|+.+|...|+ +++++++.
T Consensus 456 ~el~~~m~~~G~~~i~el~~~ 476 (511)
T 1kbi_A 456 DEIEMSMRLLGVTSIAELKPD 476 (511)
T ss_dssp HHHHHHHHHHTCCBGGGCCGG
T ss_pred HHHHHHHHHhCCCcHHHHhHH
Confidence 999999999999 99999764
No 113
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.71 E-value=1.7e-16 Score=175.67 Aligned_cols=187 Identities=18% Similarity=0.201 Sum_probs=146.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCC-------------CCC---------------CCcccC--
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGM-------------GER---------------GMGLAC-- 613 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~-------------~~~---------------~~G~~~-- 613 (842)
.|...|+..+.+.+...+++++++++|+++|+||+.||..- ... ..|+.+
T Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 202 (370)
T 1gox_A 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSS 202 (370)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHH
T ss_pred CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHH
Confidence 46788886567888889999999999999999999998430 011 112222
Q ss_pred ----CCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCcc
Q psy16199 614 ----GQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689 (842)
Q Consensus 614 ----~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~ 689 (842)
..++....+.++++++.+++||++|...+ .+.++.+.++|+|+|+++|+.+ + .
T Consensus 203 ~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~----~e~a~~a~~~Gad~I~vs~~gg-r------------------~ 259 (370)
T 1gox_A 203 YVAGQIDRSLSWKDVAWLQTITSLPILVKGVIT----AEDARLAVQHGAAGIIVSNHGA-R------------------Q 259 (370)
T ss_dssp HHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCS----HHHHHHHHHTTCSEEEECCGGG-T------------------S
T ss_pred HHHhhcCccchHHHHHHHHHHhCCCEEEEecCC----HHHHHHHHHcCCCEEEECCCCC-c------------------c
Confidence 22445556789999999999999999864 3568999999999999988531 0 0
Q ss_pred ccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc----Cc----hhHHHHH
Q psy16199 690 TYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ----DF----TVVDDYI 760 (842)
Q Consensus 690 ~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~----gp----~~~~~i~ 760 (842)
+.+ .+..++.+.++++.++ ++|||++|||++++|+.+++++||++|+|||++++. |+ ..++.+.
T Consensus 260 ----~~~---~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~ 332 (370)
T 1gox_A 260 ----LDY---VPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMR 332 (370)
T ss_dssp ----STT---CCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCC---cccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHHHHHHHHHHHH
Confidence 111 1346888999998875 699999999999999999999999999999999953 33 6788999
Q ss_pred HHHHHHHHhcCC-CccccCCC
Q psy16199 761 TGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 761 ~~l~~~m~~~g~-~i~~~~~~ 780 (842)
++|+.+|...|+ +++++++.
T Consensus 333 ~el~~~m~~~G~~~i~el~~~ 353 (370)
T 1gox_A 333 DEFELTMALSGCRSLKEISRS 353 (370)
T ss_dssp HHHHHHHHHHTCSBTTTCCGG
T ss_pred HHHHHHHHHhCCCCHHHhhhc
Confidence 999999999999 99998864
No 114
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.71 E-value=6.4e-17 Score=178.38 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=130.5
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCCc-cEEEEecCCh-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVKI-PFFVKLTPNI- 643 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~~-Pv~vKl~p~~- 643 (842)
.++|.++|+++.++|+|+||||.+| |++. ....+|.++..+++++.+++++||+.++. ||.||++++.
T Consensus 160 i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~ 239 (365)
T 2gou_A 160 IADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTT 239 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccc
Confidence 5799999999999999999999876 8543 33458888988999999999999998843 9999999841
Q ss_pred ----------hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 644 ----------TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 644 ----------~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
++..++++.+++.|+|+|.++++... +.+..| +++++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~--------------------------~~~~~~--~~~~~~i~~~ 291 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWD--------------------------DAPDTP--VSFKRALREA 291 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTT--------------------------BCCCCC--HHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC--------------------------CCCCcc--HHHHHHHHHH
Confidence 25778999999999999999875321 000012 5788899999
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
+ ++|||++||| |++++.++|+.| ||+|+++|+++.+ |+++.++.++
T Consensus 292 ~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~~-P~l~~~~~~g 338 (365)
T 2gou_A 292 Y-QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIAN-PDLPERLRHG 338 (365)
T ss_dssp C-CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHHC-TTHHHHHHHT
T ss_pred C-CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHhC-chHHHHHHcC
Confidence 8 7999999999 999999999998 9999999999965 9999999765
No 115
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.70 E-value=1.8e-16 Score=191.51 Aligned_cols=167 Identities=12% Similarity=0.094 Sum_probs=133.2
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCCC-CCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGMG-ERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~- 642 (842)
.++|.++|+++.++|+|+||||.+| |++.. ...||+++..+++++.|++++||+++ ++||++|++++
T Consensus 148 i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 148 QQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 5799999999999999999999998 85443 34589999999999999999999998 89999999863
Q ss_pred ---------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 643 ---------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 643 ---------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.++..++++.+++ |+|.|.+++..... ......| ..+.++ ...+++++++++.
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~----~~~~~~~----------~~~~~~---~~~~~~~~~i~~~ 289 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAE----WGEDAGP----------SRFYQQ---GHTIPWVKLVKQV 289 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTT----GGGTSCC----------TTTCCT---TTTHHHHHHHHTT
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccc----cccccCC----------ccccCc---cccHHHHHHHHHH
Confidence 3477889999988 79999997642110 0000000 001111 1137888999999
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
+ ++|||++|||.|++++.++|+.| ||+|++||+++. +|+++.++.++
T Consensus 290 ~-~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~-~P~~~~~~~~g 337 (729)
T 1o94_A 290 S-KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA-DPFLPQKVEQG 337 (729)
T ss_dssp C-SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH-CTTHHHHHHTT
T ss_pred C-CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc-CchHHHHHHcC
Confidence 8 79999999999999999999987 999999999995 59999999876
No 116
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.70 E-value=1.2e-16 Score=176.41 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=135.4
Q ss_pred HhHHHHHHHHHhhcCcCEEEEecc---------CCCCCC-CCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLS---------CPHGMG-ERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~s---------cP~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~- 642 (842)
.++|.++|+++.++|+|+||||.. ||++.. ...||+++..+.+++.+++++|++.+ ++||.||++++
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~ 236 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLE 236 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchh
Confidence 578999999999999999999965 796543 34589999888999999999999998 68999999874
Q ss_pred --------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 643 --------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 643 --------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
.++..++++.+++.|+|.|.++++.... . ...| .++ ...+++++++++.+
T Consensus 237 ~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-----~-~~~~-------------~~~---~~~~~~~~~ir~~~ 294 (363)
T 3l5l_A 237 YDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIP-----D-TNIP-------------WGP---AFMGPIAERVRREA 294 (363)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSS-----C-CCCC-------------CCT---TTTHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-----c-cccC-------------CCc---chhHHHHHHHHHHc
Confidence 2377899999999999999998742210 0 0000 111 12377888999988
Q ss_pred CCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 715 PNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
++|||++|||.|++++.++|+.| ||+|+++|+++. +|+++.++.++|.
T Consensus 295 -~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la-nPdl~~k~~~~lg 343 (363)
T 3l5l_A 295 -KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA-DPHWAYFAAKELG 343 (363)
T ss_dssp -TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH-CTTHHHHHHHHTT
T ss_pred -CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh-CchHHHHHHHHcC
Confidence 79999999999999999999998 999999999995 5999999988764
No 117
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.69 E-value=1.9e-16 Score=175.06 Aligned_cols=157 Identities=13% Similarity=0.055 Sum_probs=129.7
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCCc-cEEEEecCC--
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVKI-PFFVKLTPN-- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~~-Pv~vKl~p~-- 642 (842)
.++|.++|+++.++|+|+||||.+| |++. ....||+++..+++++.+++++||+.++. ||.||++++
T Consensus 165 i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~ 244 (377)
T 2r14_A 165 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLE 244 (377)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccc
Confidence 5799999999999999999999986 9544 33458889999999999999999999853 999999874
Q ss_pred ---------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 643 ---------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 643 ---------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.++..++++.+++.|+|+|.+++.... +..++. .+++++++++.
T Consensus 245 ~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~----------------------~~~~~~-----~~~~~~~ik~~ 297 (377)
T 2r14_A 245 LFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWI----------------------GGDITY-----PEGFREQMRQR 297 (377)
T ss_dssp CTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC----------------------------CC-----CTTHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc----------------------CCCCcc-----hHHHHHHHHHH
Confidence 235788999999999999999874221 000111 15678889999
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
+ ++|||++||| +++++.++|+.| ||+|+++|+++. +|+++.++.++
T Consensus 298 ~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~-~P~l~~k~~~g 344 (377)
T 2r14_A 298 F-KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA-NPDLPERFRLG 344 (377)
T ss_dssp C-CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHT
T ss_pred C-CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh-CchHHHHHHcC
Confidence 8 7999999999 799999999988 999999999995 59999998765
No 118
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.68 E-value=2.7e-16 Score=175.13 Aligned_cols=166 Identities=11% Similarity=0.096 Sum_probs=132.3
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCC-ccEEEEecCCh-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVK-IPFFVKLTPNI- 643 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~p~~- 643 (842)
.++|.++|+++.++|+|+||||.+| |++. ....||+++..+++++.|++++||++++ .||.||++++-
T Consensus 170 i~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~ 249 (402)
T 2hsa_B 170 VEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAID 249 (402)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccc
Confidence 5799999999999999999999985 9644 3455899999999999999999999984 49999998851
Q ss_pred ----------hcHHHHHHHHHHCC------CCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHH
Q psy16199 644 ----------TNITDIAKAAYEGK------ADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAV 707 (842)
Q Consensus 644 ----------~~~~~~a~~~~~~G------~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v 707 (842)
++..++++.|++.| +|+|.+++..... . ...|. ..++.. . ..++++
T Consensus 250 ~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~-----~-~~~~~---------~~~~~~-~--~~~~~~ 311 (402)
T 2hsa_B 250 HLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVA-----Y-GQTEA---------GRLGSE-E--EEARLM 311 (402)
T ss_dssp STTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCT-----T-TTSSS---------TTTTHH-H--HHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCcccc-----c-cCCcc---------ccccCC-c--chHHHH
Confidence 24789999999999 9999998753210 0 00000 000100 0 136888
Q ss_pred HHHHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 708 SSIAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 708 ~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
+++++.+ ++|||++||| +++++.++|+.| ||+|++||+++. +|+++.++.++
T Consensus 312 ~~vk~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~-dP~l~~k~~~g 364 (402)
T 2hsa_B 312 RTLRNAY-QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS-NPDLVMRIKLN 364 (402)
T ss_dssp HHHHHHC-SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHT
T ss_pred HHHHHHC-CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh-CchHHHHHHhC
Confidence 9999998 7999999999 999999999987 999999999995 59999999765
No 119
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.68 E-value=1.8e-16 Score=173.59 Aligned_cols=151 Identities=12% Similarity=0.067 Sum_probs=127.9
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCCc-cEEEEecCC--
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVKI-PFFVKLTPN-- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~~-Pv~vKl~p~-- 642 (842)
.++|.++|+++.++|+|+||||.+| |.+. +...||+++..+.+++.+++++||+.++. ||.||++++
T Consensus 152 i~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~ 231 (362)
T 4ab4_A 152 VEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRAD 231 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccc
Confidence 5789999999999999999999997 8544 33458999999999999999999999843 999999985
Q ss_pred ---------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 643 ---------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 643 ---------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.++..++++.+++.|+|.|.+++.. +|+ .+++++++.
T Consensus 232 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~---------------------------~~~-------~~~~~ik~~ 277 (362)
T 4ab4_A 232 AHDMGDADRAETFTYVARELGKRGIAFICSRERE---------------------------ADD-------SIGPLIKEA 277 (362)
T ss_dssp SSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC---------------------------CTT-------CCHHHHHHH
T ss_pred ccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC---------------------------CCH-------HHHHHHHHH
Confidence 2357889999999999999997531 111 235677888
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+ ++|||++||| |++++.++|+.| ||+|++||+++. +|+++.++++++
T Consensus 278 ~-~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la-nPdl~~k~~~g~ 325 (362)
T 4ab4_A 278 F-GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA-NPDLPARLAADA 325 (362)
T ss_dssp H-CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHTTC
T ss_pred C-CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh-CcHHHHHHHcCC
Confidence 7 6999999999 999999999987 999999999995 599999998764
No 120
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.68 E-value=4e-16 Score=171.96 Aligned_cols=156 Identities=16% Similarity=0.162 Sum_probs=130.2
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCCC-CCCCcccCCCCHHHHHHHHHHHHhhCC-ccEEEEecCC--
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGMG-ERGMGLACGQDPEMVRNISLWVRSSVK-IPFFVKLTPN-- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~p~-- 642 (842)
.++|.++|+++.++|+|+||||.+| |++.. ...||.++..+++++.+++++||+.++ -||.||++++
T Consensus 160 i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~ 239 (364)
T 1vyr_A 160 VNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 5799999999999999999999975 85443 345888999999999999999999984 3999999985
Q ss_pred hh----------cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh
Q psy16199 643 IT----------NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK 712 (842)
Q Consensus 643 ~~----------~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~ 712 (842)
+. +..++++.+++.|+|+|.++++... ++ +. ..+++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~----------------------~~---~~---~~~~~~~~v~~ 291 (364)
T 1vyr_A 240 FQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLA----------------------GG---KP---YSEAFRQKVRE 291 (364)
T ss_dssp BTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT----------------------BC---CC---CCHHHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCccc----------------------CC---Cc---ccHHHHHHHHH
Confidence 22 4667899999999999999874211 00 00 12678889999
Q ss_pred hCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 713 MFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 713 ~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
.+ ++|||++||| +++++.++|+.| ||+|+++|+++. +|+++.++.++
T Consensus 292 ~~-~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~-~P~~~~~~~~g 339 (364)
T 1vyr_A 292 RF-HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA-NPDLVARLQKK 339 (364)
T ss_dssp HC-CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHT
T ss_pred HC-CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHh-ChhHHHHHHcC
Confidence 98 7999999999 999999999988 999999999995 59999998765
No 121
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.68 E-value=4.3e-16 Score=170.34 Aligned_cols=197 Identities=17% Similarity=0.196 Sum_probs=137.2
Q ss_pred cceEEEec----cCCCHhHHHHHHHHHhhcCcCEEEEeccCCCC-CCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEE
Q psy16199 564 SILIASIM----CTYNKDDWLELSKKTEKAGADALELNLSCPHG-MGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK 638 (842)
Q Consensus 564 ~pvi~si~----~g~~~e~~~~~a~~~~~agaD~ielN~scP~~-~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vK 638 (842)
.|+++++. .+.+++...++++.+ ++|++++|+++... ....+ .+.+.+.++++++++ +++||++|
T Consensus 118 ~pv~~~~~~~q~~~~~~~~~~~a~~~~---~~~a~~i~~n~~~~~~~~~~------~~~~~~~~~i~~vr~-~~~Pv~vK 187 (332)
T 1vcf_A 118 ALLIANLGLAQLRRYGRDDLLRLVEML---EADALAFHVNPLQEAVQRGD------TDFRGLVERLAELLP-LPFPVMVK 187 (332)
T ss_dssp SCEEEEEEGGGGGTCCHHHHHHHHHHH---TCSEEEEECCHHHHHHTTSC------CCCTTHHHHHHHHCS-CSSCEEEE
T ss_pred ceeecccChhhhhccChHHHHHHHhhc---CCCceeeccchHHHHhcCCC------ccHHHHHHHHHHHHc-CCCCEEEE
Confidence 68887775 234567777766653 68998888764310 00111 223347889999999 99999999
Q ss_pred -ecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 639 -LTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 639 -l~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
+.++ ...+.|+.+.++|+|+|+++|+.+. ++..++..+..... .. .+....|. ..++.+.++++.++++
T Consensus 188 ~v~~g--~~~e~a~~~~~~G~d~I~vs~~ggt-~~~~~~~~r~~~~~--~~-~~~~~~g~----~~~~~l~~v~~~~~~i 257 (332)
T 1vcf_A 188 EVGHG--LSREAALALRDLPLAAVDVAGAGGT-SWARVEEWVRFGEV--RH-PELCEIGI----PTARAILEVREVLPHL 257 (332)
T ss_dssp CSSSC--CCHHHHHHHTTSCCSEEECCCBTSC-CHHHHHHTC-----------CCTTCSC----BHHHHHHHHHHHCSSS
T ss_pred ecCCC--CCHHHHHHHHHcCCCEEEeCCCCCC-cchhHHHhhccccc--hh-hhHhhccc----cHHHHHHHHHHhcCCC
Confidence 4433 2245689999999999999997432 11111110000000 00 00011222 2478889999888679
Q ss_pred cEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc---cCc----hhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 718 PILGIGGIDSADVALQFIQAGAHAVQICSAVQN---QDF----TVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~---~gp----~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
|||++|||++++|+.++|++||++||+||++++ .|+ .+++.+.++|+.+|...|+ +++++++.
T Consensus 258 pvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~ 328 (332)
T 1vcf_A 258 PLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGARNPKEARGR 328 (332)
T ss_dssp CEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTC
T ss_pred eEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhh
Confidence 999999999999999999999999999999994 454 7888999999999999999 99998753
No 122
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.68 E-value=2.1e-16 Score=173.07 Aligned_cols=151 Identities=13% Similarity=0.103 Sum_probs=128.2
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCCc-cEEEEecCC--
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVKI-PFFVKLTPN-- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~~-Pv~vKl~p~-- 642 (842)
.++|.++|+++.++|+|+||||.+| |.+. ....||+++..+.+++.+++++||+.++. ||.||++++
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~ 239 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD 239 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc
Confidence 5789999999999999999999997 9544 34458889999999999999999999843 999999984
Q ss_pred ---------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 643 ---------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 643 ---------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.++..++++.++++|+|.|.+++.. +|+ .+++++++.
T Consensus 240 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~---------------------------~~~-------~~~~~ik~~ 285 (361)
T 3gka_A 240 AHTMGDSDPAATFGHVARELGRRRIAFLFARESF---------------------------GGD-------AIGQQLKAA 285 (361)
T ss_dssp SSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC---------------------------STT-------CCHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC---------------------------CCH-------HHHHHHHHH
Confidence 2357889999999999999997531 111 235677888
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+ ++|||++||| |++++.++|+.| ||+|++||+++. +|+++.++++++
T Consensus 286 ~-~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la-dPdl~~k~~~g~ 333 (361)
T 3gka_A 286 F-GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA-NPDLPRRFKLNA 333 (361)
T ss_dssp H-CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred c-CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh-CcHHHHHHHhCC
Confidence 7 6999999999 999999999987 999999999995 599999998874
No 123
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.66 E-value=2.7e-15 Score=179.86 Aligned_cols=168 Identities=14% Similarity=0.116 Sum_probs=136.4
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN- 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~- 642 (842)
.++|.++|+++.++|+|+||||.+| |++. ....||+++..+++++.+++++||+.+ ++||++|++++
T Consensus 140 i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~ 219 (671)
T 1ps9_A 140 IDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD 219 (671)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc
Confidence 4789999999999999999999875 8544 345589999999999999999999998 79999999863
Q ss_pred -------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC
Q psy16199 643 -------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP 715 (842)
Q Consensus 643 -------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~ 715 (842)
.++..++++.++++|+|+|.+++..... ..|.. ....++ ...+++++++++.+
T Consensus 220 ~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~--------~~~~~--------~~~~~~---~~~~~~~~~i~~~~- 279 (671)
T 1ps9_A 220 LVEDGGTFAETVELAQAIEAAGATIINTGIGWHEA--------RIPTI--------ATPVPR---GAFSWVTRKLKGHV- 279 (671)
T ss_dssp CSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTC--------SSCSS--------STTSCT---TTTHHHHHHHTTSC-
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCcccc--------ccccc--------cccCCc---chHHHHHHHHHHhc-
Confidence 3467899999999999999998753210 01110 011111 12367888999988
Q ss_pred CCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 716 NFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 716 ~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
++|||++|||.+++++.++++.| ||+|+++|+++.+ |+++.++.+++.
T Consensus 280 ~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~-P~l~~k~~~g~~ 328 (671)
T 1ps9_A 280 SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLAD-AELLSKAQSGRA 328 (671)
T ss_dssp SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHC-TTHHHHHHTTCG
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhC-cHHHHHHHcCCC
Confidence 79999999999999999999988 9999999999964 999999988764
No 124
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.65 E-value=5e-16 Score=173.60 Aligned_cols=167 Identities=14% Similarity=0.215 Sum_probs=132.7
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCCC-CCCCcccC-CCCHHHHHHHHHHHHhhC------CccEEEE
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGMG-ERGMGLAC-GQDPEMVRNISLWVRSSV------KIPFFVK 638 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~~-~~~~G~~~-~~~~~~~~~ii~~v~~~~------~~Pv~vK 638 (842)
.++|.++|+++.++|+|+||||.+| |.+.. ...||+++ ..+.+++.+++++|++++ ++||.+|
T Consensus 169 i~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vR 248 (419)
T 3l5a_A 169 IQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFR 248 (419)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEe
Confidence 5789999999999999999999886 95543 34589998 899999999999999987 6899999
Q ss_pred ecCC----------hhcHHHHHHHHHH-CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHH
Q psy16199 639 LTPN----------ITNITDIAKAAYE-GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAV 707 (842)
Q Consensus 639 l~p~----------~~~~~~~a~~~~~-~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v 707 (842)
++++ .++..++++.+++ +|+|.|.+++........ .....|+. ..+.++
T Consensus 249 is~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~-----------------~~~~~g~~---~~~~~a 308 (419)
T 3l5a_A 249 ATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQN-----------------TSRTPGDH---FGRPVN 308 (419)
T ss_dssp ECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGC-----------------BCCCSSTT---TTSBHH
T ss_pred cccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCcccccc-----------------ccCCCCcc---ccHHHH
Confidence 9882 4478899999999 999999998753210000 00011221 113456
Q ss_pred HHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 708 SSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 708 ~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
+.+++.++ ++|||++|||.|+++|.++|+. ||+|++||+++. +|+++.++.++..
T Consensus 309 ~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia-nPdlv~ki~~G~~ 364 (419)
T 3l5a_A 309 QIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT-EPDFVHKLAEQRP 364 (419)
T ss_dssp HHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH-CTTHHHHHHTTCG
T ss_pred HHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH-CcHHHHHHHcCCc
Confidence 67777764 5999999999999999999999 999999999995 5999999988754
No 125
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.64 E-value=1.6e-14 Score=157.94 Aligned_cols=176 Identities=16% Similarity=0.173 Sum_probs=130.2
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcC--cCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~ag--aD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
|+.+++ +..++++. .++.+.++| +|+|++|++. | ++....++++++++.++.|+++|- +
T Consensus 96 ~v~v~~--g~~~~~~~-~a~~~~~~g~~~~~i~i~~~~---------G-----~~~~~~~~i~~lr~~~~~~~vi~G--~ 156 (336)
T 1ypf_A 96 IASISV--GVKEDEYE-FVQQLAAEHLTPEYITIDIAH---------G-----HSNAVINMIQHIKKHLPESFVIAG--N 156 (336)
T ss_dssp CCEEEE--CCSHHHHH-HHHHHHHTTCCCSEEEEECSS---------C-----CSHHHHHHHHHHHHHCTTSEEEEE--E
T ss_pred eEEEeC--CCCHHHHH-HHHHHHhcCCCCCEEEEECCC---------C-----CcHHHHHHHHHHHHhCCCCEEEEC--C
Confidence 566665 45566554 466667778 9999999731 1 567888999999999975655653 1
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
+.. .+.|+.+.++|+|+|+++|.-+.. . + .+. ..+...+ ...+..+.++++.+ ++|||++
T Consensus 157 v~s-~e~A~~a~~aGad~Ivvs~hgG~~--~--~----------~~~-~~~~g~~---g~~~~~l~~v~~~~-~ipVIa~ 216 (336)
T 1ypf_A 157 VGT-PEAVRELENAGADATKVGIGPGKV--C--I----------TKI-KTGFGTG---GWQLAALRWCAKAA-SKPIIAD 216 (336)
T ss_dssp ECS-HHHHHHHHHHTCSEEEECSSCSTT--C--H----------HHH-HHSCSST---TCHHHHHHHHHHTC-SSCEEEE
T ss_pred cCC-HHHHHHHHHcCCCEEEEecCCCce--e--e----------ccc-ccCcCCc---hhHHHHHHHHHHHc-CCcEEEe
Confidence 222 467999999999999998863210 0 0 000 0111111 12478889999988 8999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhc-------------------cC---------c-----------------hhHH
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQN-------------------QD---------F-----------------TVVD 757 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~-------------------~g---------p-----------------~~~~ 757 (842)
|||.++.|+.+++++||++||+||+++. .| + .+++
T Consensus 217 GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~ 296 (336)
T 1ypf_A 217 GGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLI 296 (336)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCCCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeecccccHHHHHH
Confidence 9999999999999999999999999992 23 2 6888
Q ss_pred HHHHHHHHHHHhcCC-CccccCC
Q psy16199 758 DYITGLQTLLYLKST-QLKGWDG 779 (842)
Q Consensus 758 ~i~~~l~~~m~~~g~-~i~~~~~ 779 (842)
.+.++|+..|...|+ +++|+..
T Consensus 297 ~l~~el~~~m~~~G~~~i~el~~ 319 (336)
T 1ypf_A 297 EMEQDLQSSISYAGGTKLDSIRT 319 (336)
T ss_dssp HHHHHHHHHHHHTTSSBGGGGGG
T ss_pred HHHHHHHHHHHHhCcccHHHhCc
Confidence 999999999999999 9999953
No 126
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.64 E-value=6.6e-16 Score=170.84 Aligned_cols=158 Identities=8% Similarity=0.022 Sum_probs=127.8
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccC---------CCCCC-CCCCcccCCCCHHHHHHHHHHHHhhCCc-cEEEEecCCh-
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSC---------PHGMG-ERGMGLACGQDPEMVRNISLWVRSSVKI-PFFVKLTPNI- 643 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~sc---------P~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~~~-Pv~vKl~p~~- 643 (842)
.++|.++|+++.++|+|+||||.+| |++.. ...||+++..+++++.+++++||++++- ||.||++++.
T Consensus 166 i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~ 245 (376)
T 1icp_A 166 VNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccc
Confidence 5899999999999999999999986 85443 3458888999999999999999999853 9999998741
Q ss_pred ----------hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 644 ----------TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 644 ----------~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.+..++++.|++.|+|+|.+++..... . .++. ..+++++++++.
T Consensus 246 ~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--------------------~--~~~~----~~~~~~~~vr~~ 299 (376)
T 1icp_A 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKT--------------------A--WEKI----ECTESLVPMRKA 299 (376)
T ss_dssp TTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC--------------------------------CCCCSHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC--------------------C--CCcc----ccHHHHHHHHHH
Confidence 146789999999999999998753210 0 0000 012445778888
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
+ ++|||++||| +++++.++|+.| ||+|++||+++. +|+++.++.++
T Consensus 300 ~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~-~P~l~~k~~~g 346 (376)
T 1icp_A 300 Y-KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS-NPDLPKRFELN 346 (376)
T ss_dssp C-CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHT
T ss_pred c-CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh-CccHHHHHHcC
Confidence 8 7999999999 999999999987 999999999995 59999999765
No 127
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.64 E-value=5.3e-15 Score=163.96 Aligned_cols=133 Identities=16% Similarity=0.113 Sum_probs=110.0
Q ss_pred CHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCC
Q psy16199 616 DPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695 (842)
Q Consensus 616 ~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~s 695 (842)
+|+...++++++++.+++||++|... ..+.|+.+.++|+|+|+++|..+. ...+
T Consensus 209 ~p~~~~~~i~~i~~~~~~Pv~vkgv~----t~e~a~~a~~aGad~I~vs~~gg~-------------------~~d~--- 262 (380)
T 1p4c_A 209 DASFNWEALRWLRDLWPHKLLVKGLL----SAEDADRCIAEGADGVILSNHGGR-------------------QLDC--- 262 (380)
T ss_dssp CTTCCHHHHHHHHHHCCSEEEEEEEC----CHHHHHHHHHTTCSEEEECCGGGT-------------------SCTT---
T ss_pred CccccHHHHHHHHHhcCCCEEEEecC----cHHHHHHHHHcCCCEEEEcCCCCC-------------------cCCC---
Confidence 66777899999999999999999642 356789999999999999774210 0011
Q ss_pred CCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCc---------hhHHHHHHHHHHH
Q psy16199 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF---------TVVDDYITGLQTL 766 (842)
Q Consensus 696 G~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp---------~~~~~i~~~l~~~ 766 (842)
| +..++.+.++++.+ ++|||++|||++++|+.+++++||++|++||++++ +. ..++.+.++|+.+
T Consensus 263 ~----~~~~~~l~~v~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~-~~~~~g~~~v~~~~~~l~~el~~~ 336 (380)
T 1p4c_A 263 A----ISPMEVLAQSVAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLY-GLAARGETGVDEVLTLLKADIDRT 336 (380)
T ss_dssp C----CCGGGTHHHHHHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C----cCHHHHHHHHHHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHH-HHHhcCHHHHHHHHHHHHHHHHHH
Confidence 2 22477888888887 57999999999999999999999999999999995 34 4788899999999
Q ss_pred HHhcCC-CccccCCC
Q psy16199 767 LYLKST-QLKGWDGQ 780 (842)
Q Consensus 767 m~~~g~-~i~~~~~~ 780 (842)
|...|+ +++++++.
T Consensus 337 m~~~G~~~i~el~~~ 351 (380)
T 1p4c_A 337 LAQIGCPDITSLSPD 351 (380)
T ss_dssp HHHHTCCBGGGCCGG
T ss_pred HHHhCCCCHHHhccC
Confidence 999999 99999865
No 128
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.62 E-value=4.5e-15 Score=164.05 Aligned_cols=156 Identities=12% Similarity=0.002 Sum_probs=129.0
Q ss_pred CHhHHHHHHHHHh-hcCcCEEEEeccC---------CCCCC--CCCCcc-cCCCCHHHHHHHHHHHHhhCC-ccEEEEec
Q psy16199 575 NKDDWLELSKKTE-KAGADALELNLSC---------PHGMG--ERGMGL-ACGQDPEMVRNISLWVRSSVK-IPFFVKLT 640 (842)
Q Consensus 575 ~~e~~~~~a~~~~-~agaD~ielN~sc---------P~~~~--~~~~G~-~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~ 640 (842)
..++|.++|+++. ++|+|+||||.+| |++.. ...||. ++..+.+++.+++++||++++ -||.+|++
T Consensus 172 ~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis 251 (379)
T 3aty_A 172 IIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRIS 251 (379)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 4678899999999 9999999999875 86543 345888 888899999999999999875 48999999
Q ss_pred CCh-----------hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 641 PNI-----------TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 641 p~~-----------~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
++- ++..++++.+++.|+|+|.++++... .+. .|. + +++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~--------------------------~~~-~~~--~-~~~ 301 (379)
T 3aty_A 252 PLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMV--------------------------NQQ-IGD--V-VAW 301 (379)
T ss_dssp TTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTT--------------------------SCC-CCC--H-HHH
T ss_pred cccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcC--------------------------CCC-ccH--H-HHH
Confidence 842 35789999999999999999874210 000 122 5 788
Q ss_pred HHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHH
Q psy16199 710 IAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 710 i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+++.+ ++|||++||| |++++.++|+.| ||+|+++|+++. +|+++.++.+++
T Consensus 302 ir~~~-~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~-~P~l~~k~~~g~ 353 (379)
T 3aty_A 302 VRGSY-SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA-NPDLVERAQQNW 353 (379)
T ss_dssp HHTTC-CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred HHHHC-CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh-CcHHHHHHHcCC
Confidence 88888 7999999999 999999999987 999999999996 499999997653
No 129
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.60 E-value=1e-14 Score=169.93 Aligned_cols=140 Identities=12% Similarity=0.097 Sum_probs=95.4
Q ss_pred eecceeEeecC-CCCcccccc--------CC----------------CC----CCCHHHHHHHHHHHHhcCc--EEEece
Q psy16199 24 LSKDLPDIERP-VAALPDSSE--------IP----------------QY----RLPFDAVNFEVELVKDLGV--KIECER 72 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~~--------iP----------------~~----~~~~~~v~~~~~~l~~~gV--~i~~~~ 72 (842)
.|++|+|+|+. .+||.+... +| .+ ....++.++..+.++++|+ ++++++
T Consensus 31 ~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~ 110 (540)
T 3gwf_A 31 LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGT 110 (540)
T ss_dssp TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESC
T ss_pred CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEecc
Confidence 68899999996 889865311 11 00 0123667777788888888 788887
Q ss_pred eecc-----c----cceeccccccCCCEEEEccCC-CCCCCCCCCCCCccccC-ceehhcchHHHhhcccCCccCCCCCC
Q psy16199 73 SLST-----R----DITIEKLRKDGYTAIFIGIGK-PNANVIPIFQGLTEEMG-FYTSKTFLPRVATSSKKGLCGGCKKE 141 (842)
Q Consensus 73 ~v~~-----~----~v~~~~~~~~~yd~lVlAtGs-~~~~~~~i~~G~~~~~g-v~~~~~~l~~~~~~~~~~~c~~c~~~ 141 (842)
.|.. . .|+++++..+.||+||+|||. ..|+.+++| |+++..| ++++..+...
T Consensus 111 ~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~~~~~~~~~~~---------------- 173 (540)
T 3gwf_A 111 EVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLP-GLDTFEGETIHTAAWPEG---------------- 173 (540)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCT-TGGGCCSEEEEGGGCCSS----------------
T ss_pred EEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCC-CccccCCCEEEeecCCCc----------------
Confidence 6642 1 244455555679999999995 237778888 7655544 2333222210
Q ss_pred CCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 142 SLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 142 ~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
....+++|+|||+|.+|+|+|..|++.+. +||++.|.+.
T Consensus 174 -~~~~~krV~VIG~G~sgve~a~~l~~~~~-~Vtv~~r~~~ 212 (540)
T 3gwf_A 174 -KSLAGRRVGVIGTGSTGQQVITSLAPEVE-HLTVFVRTPQ 212 (540)
T ss_dssp -CCCTTSEEEEECCSHHHHHHHHHHTTTCS-EEEEEESSCC
T ss_pred -cccccceEEEECCCchHHHHHHHHHhhCC-EEEEEECCCC
Confidence 12233459999999999999999999875 5999999875
No 130
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.54 E-value=1.8e-13 Score=153.66 Aligned_cols=178 Identities=15% Similarity=0.096 Sum_probs=126.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~ 642 (842)
.+++++++ .+ +++.+.++.+.++|+|+|++|.++ .+++.+.++++++++.+ ++||+++-..+
T Consensus 142 ~~~~~~i~--~~-~~~~~~a~~~~~~G~d~i~i~~~~--------------g~~~~~~e~i~~ir~~~~~~pviv~~v~~ 204 (404)
T 1eep_A 142 LRVGAAVS--ID-IDTIERVEELVKAHVDILVIDSAH--------------GHSTRIIELIKKIKTKYPNLDLIAGNIVT 204 (404)
T ss_dssp BCCEEEEC--SC-TTHHHHHHHHHHTTCSEEEECCSC--------------CSSHHHHHHHHHHHHHCTTCEEEEEEECS
T ss_pred ceEEEEeC--CC-hhHHHHHHHHHHCCCCEEEEeCCC--------------CChHHHHHHHHHHHHHCCCCeEEEcCCCc
Confidence 35778884 23 345666777777899999998542 13578889999999998 89999864332
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
.+.|+.+.++|+|+|+++.. .+. +. .....+++.++. ..++..+.++.+.. ++|||++
T Consensus 205 ----~~~a~~a~~~Gad~I~vg~~-~G~----~~----------~~~~~~~~g~p~--~~~l~~v~~~~~~~-~ipVia~ 262 (404)
T 1eep_A 205 ----KEAALDLISVGADCLKVGIG-PGS----IC----------TTRIVAGVGVPQ--ITAICDVYEACNNT-NICIIAD 262 (404)
T ss_dssp ----HHHHHHHHTTTCSEEEECSS-CST----TS----------HHHHHHCCCCCH--HHHHHHHHHHHTTS-SCEEEEE
T ss_pred ----HHHHHHHHhcCCCEEEECCC-CCc----Cc----------CccccCCCCcch--HHHHHHHHHHHhhc-CceEEEE
Confidence 46789999999999999321 110 00 000112332221 12233344433344 7999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhcc-------------------------------------------------C-
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQ-------------------------------------------------D- 752 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~-------------------------------------------------g- 752 (842)
|||.+++|+.+++++||++|++||+++.. |
T Consensus 263 GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~ 342 (404)
T 1eep_A 263 GGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGI 342 (404)
T ss_dssp SCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC----------------------------------
T ss_pred CCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhcccccccccccCcee
Confidence 99999999999999999999999999521 1
Q ss_pred ----------chhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 753 ----------FTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 753 ----------p~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
-.+++.+.++|+..|...|+ +++|+...
T Consensus 343 ~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~ 381 (404)
T 1eep_A 343 EGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKIN 381 (404)
T ss_dssp --CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred EEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhc
Confidence 16678889999999999999 99999754
No 131
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.54 E-value=1.1e-14 Score=175.06 Aligned_cols=165 Identities=13% Similarity=0.069 Sum_probs=130.7
Q ss_pred HhHHHHHHHHHhhcCcCEEEEec----------cCCCCC-CCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC
Q psy16199 576 KDDWLELSKKTEKAGADALELNL----------SCPHGM-GERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN 642 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~----------scP~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~ 642 (842)
.++|.++|+++.++|+|+||||. .||++. +...||+++..+.+++.+++++|++.+ ++||.+|++++
T Consensus 155 i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~ 234 (690)
T 3k30_A 155 RRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVE 234 (690)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcc
Confidence 57999999999999999999965 466443 344589999999999999999999998 68999999875
Q ss_pred --------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 643 --------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 643 --------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
.++..++++.+++ |+|.|.++....... ..| ..+.. ....+++++++++.+
T Consensus 235 ~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~-------~~~----------~~~~~---~~~~~~~~~~i~~~~ 293 (690)
T 3k30_A 235 EEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGD-------SVT----------SRFAP---EGRQEEFVAGLKKLT 293 (690)
T ss_dssp CCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHH-------TCC----------TTTCC---TTTTHHHHTTSGGGC
T ss_pred ccCCCCCCHHHHHHHHHHHHh-hcCEEEEeccccccc-------CCC----------CccCC---ccccHHHHHHHHHHc
Confidence 3568889999988 799999975421100 000 00011 111267788888888
Q ss_pred CCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHH
Q psy16199 715 PNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
++|||++|||.+++++.++|+.| ||+|+++|+++. +|+++++++++-
T Consensus 294 -~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~-~P~~~~~~~~g~ 341 (690)
T 3k30_A 294 -TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIA-DPFLPNKIRDGR 341 (690)
T ss_dssp -SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHH-CTTHHHHHHTTC
T ss_pred -CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHh-CccHHHHHHcCC
Confidence 79999999999999999999987 999999999995 599999998763
No 132
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.47 E-value=6.4e-14 Score=154.68 Aligned_cols=161 Identities=14% Similarity=0.149 Sum_probs=124.0
Q ss_pred HhH-HHHHHHHHhhcCcCEEEEeccC---------CCCC-CCCCCcccCCCCHHHHHHHHHHHHhhCC-ccEEEEecCC-
Q psy16199 576 KDD-WLELSKKTEKAGADALELNLSC---------PHGM-GERGMGLACGQDPEMVRNISLWVRSSVK-IPFFVKLTPN- 642 (842)
Q Consensus 576 ~e~-~~~~a~~~~~agaD~ielN~sc---------P~~~-~~~~~G~~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~p~- 642 (842)
.++ |.++|+++.++|+|+||||.+| |.+. ....||+++..+.+++.+++++|++.++ -||.+|+++.
T Consensus 166 i~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~ 245 (407)
T 3tjl_A 166 VYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWA 245 (407)
T ss_dssp HHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECccc
Confidence 467 9999999999999999999998 9443 3445899999999999999999999985 4899999972
Q ss_pred --------------hhcHHHHHHHH---HHCC--CCEEEEecC-CCccccCCCCCCCCCcccCCCccccCCCCCCccccc
Q psy16199 643 --------------ITNITDIAKAA---YEGK--ADGVSAINT-VSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702 (842)
Q Consensus 643 --------------~~~~~~~a~~~---~~~G--~d~i~v~nt-~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~ 702 (842)
..+...+++.| .+.| +|.|.++.. +... ...++. .
T Consensus 246 ~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~----------------------~~~~~~-~-- 300 (407)
T 3tjl_A 246 TFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGN----------------------VDVSEE-D-- 300 (407)
T ss_dssp CGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETT----------------------EECCGG-G--
T ss_pred ccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCC----------------------CcCCcc-c--
Confidence 22357889999 8889 999999631 1100 000000 0
Q ss_pred hHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHh---C-CCEEEEehhhhccCchhHHHHHHHH
Q psy16199 703 GLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQA---G-AHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 703 al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~---G-A~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
.+..+..+++.+ ++|||++|||.+.+|+.++++. | ||+|++||+++. +|+++.++++++
T Consensus 301 ~~~~~~~ir~~~-~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia-NPdL~~ri~~g~ 363 (407)
T 3tjl_A 301 QAGDNEFVSKIW-KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS-NPNLVWKLRDGI 363 (407)
T ss_dssp CCCCSHHHHHHC-CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH-CTTHHHHHHHTC
T ss_pred hhHHHHHHHHHh-CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh-CchHHHHHHcCC
Confidence 011234566777 6899999999999988888876 5 999999999995 599999998774
No 133
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.47 E-value=4.1e-13 Score=156.64 Aligned_cols=146 Identities=13% Similarity=0.152 Sum_probs=92.9
Q ss_pred eecceeEeecC-CCCccccc-cCC-----------------------C----CCCCHHHHHHHHHHHHhcCc--EEEece
Q psy16199 24 LSKDLPDIERP-VAALPDSS-EIP-----------------------Q----YRLPFDAVNFEVELVKDLGV--KIECER 72 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~-~iP-----------------------~----~~~~~~~v~~~~~~l~~~gV--~i~~~~ 72 (842)
.|++|+|+|+. .+||.+.. ..| . +....++.++..+.++++++ .+++++
T Consensus 31 ~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~ 110 (545)
T 3uox_A 31 AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNT 110 (545)
T ss_dssp TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSC
T ss_pred CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECC
Confidence 68999999996 88997531 111 0 11223667777777788887 678877
Q ss_pred eecc-----c----cceeccccccCCCEEEEccC--CCCCCCCCCCCCCccccC-ceehhcchHHHhhcccCCccCCCCC
Q psy16199 73 SLST-----R----DITIEKLRKDGYTAIFIGIG--KPNANVIPIFQGLTEEMG-FYTSKTFLPRVATSSKKGLCGGCKK 140 (842)
Q Consensus 73 ~v~~-----~----~v~~~~~~~~~yd~lVlAtG--s~~~~~~~i~~G~~~~~g-v~~~~~~l~~~~~~~~~~~c~~c~~ 140 (842)
.|.. . .|+++++..+.||+||+||| +. |+.+++| |++...+ ++++..+........ .
T Consensus 111 ~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~-p~~p~ip-G~~~f~g~~~h~~~~~~~~~~~~--------~- 179 (545)
T 3uox_A 111 RVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA-SRMPDIK-GIDSFKGESFHSSRWPTDAEGAP--------K- 179 (545)
T ss_dssp CEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCT-TGGGCCSEEEEGGGCCBCTTSCB--------S-
T ss_pred EEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC-CcCCCCC-CccccCCCeEEcccccccccccc--------c-
Confidence 6542 1 34445555667999999999 55 7888888 7655544 333322211100000 0
Q ss_pred CCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 141 ESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 141 ~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
......++|+|||+|.+|+|+|..|++.+. +||++.|.+.
T Consensus 180 -~~~~~~krV~VIG~G~tgve~a~~la~~~~-~Vtv~~r~~~ 219 (545)
T 3uox_A 180 -GVDFTGKRVGVIGTGATGVQIIPIAAETAK-ELYVFQRTPN 219 (545)
T ss_dssp -CCCCBTCEEEEECCSHHHHHHHHHHTTTBS-EEEEEESSCC
T ss_pred -ccccCCCeEEEECCCccHHHHHHHHHhhCC-EEEEEEcCCC
Confidence 012233459999999999999999999864 6999999874
No 134
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.45 E-value=4e-13 Score=156.83 Aligned_cols=140 Identities=11% Similarity=0.142 Sum_probs=96.1
Q ss_pred eecceeEeecC-CCCccccc--------cCCC--------------------CCCCHHHHHHHHHHHHhcCc--EEEece
Q psy16199 24 LSKDLPDIERP-VAALPDSS--------EIPQ--------------------YRLPFDAVNFEVELVKDLGV--KIECER 72 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~--------~iP~--------------------~~~~~~~v~~~~~~l~~~gV--~i~~~~ 72 (842)
.|++|+|+|+. .+||.+.. .+|. +....++.++..+.++++++ ++++++
T Consensus 43 ~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~ 122 (549)
T 4ap3_A 43 QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDT 122 (549)
T ss_dssp TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSC
T ss_pred CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECC
Confidence 58999999996 88986531 1221 11123667777777888887 788887
Q ss_pred eecc-----c----cceeccccccCCCEEEEccC--CCCCCCCCCCCCCccccC-ceehhcchHHHhhcccCCccCCCCC
Q psy16199 73 SLST-----R----DITIEKLRKDGYTAIFIGIG--KPNANVIPIFQGLTEEMG-FYTSKTFLPRVATSSKKGLCGGCKK 140 (842)
Q Consensus 73 ~v~~-----~----~v~~~~~~~~~yd~lVlAtG--s~~~~~~~i~~G~~~~~g-v~~~~~~l~~~~~~~~~~~c~~c~~ 140 (842)
.|.. . .|+++++..+.||+||+||| +. |+.+++| |++...+ ++++..+.. . .
T Consensus 123 ~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~-p~~p~ip-G~~~f~g~~~~~~~~~~---~-----------~ 186 (549)
T 4ap3_A 123 RVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSN-ANTPAFD-GLDRFTGDIVHTARWPH---D-----------G 186 (549)
T ss_dssp CEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEE-CCCCCCT-TGGGCCSEEEEGGGCCT---T-----------C
T ss_pred EEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCC-CCCCCCC-CcccCCCceEEeccccc---c-----------c
Confidence 6642 1 34445555567999999999 55 7788888 7655554 333322220 0 0
Q ss_pred CCCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 141 ESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 141 ~~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
....+++|+|||+|.+|+|+|..|++.+. +||++.|.+.
T Consensus 187 --~~~~~krV~VIG~G~sgve~a~~l~~~~~-~Vtv~~r~~~ 225 (549)
T 4ap3_A 187 --VDFTGKRVGVIGTGSSGIQSIPIIAEQAE-QLFVFQRSAN 225 (549)
T ss_dssp --CCCBTCEEEEECCSHHHHHHHHHHHHHBS-EEEEEESSCC
T ss_pred --cccCCCEEEEECCCchHHHHHHHHHhhCC-EEEEEECCCC
Confidence 01223459999999999999999999975 5999999874
No 135
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=1.9e-12 Score=144.73 Aligned_cols=176 Identities=18% Similarity=0.135 Sum_probs=116.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.++++++. + ..+.+.++.+.++|+|+|+++.+ |.. .. ++ .++...+-+.++++.+++||++|-..+
T Consensus 156 ~~v~~~v~-~---~~~~e~a~~~~~agad~i~i~~~-~~~-~~--~~-----~~~~~~~~i~~l~~~~~~pvi~ggi~t- 221 (393)
T 2qr6_A 156 EIVAVRVS-P---QNVREIAPIVIKAGADLLVIQGT-LIS-AE--HV-----NTGGEALNLKEFIGSLDVPVIAGGVND- 221 (393)
T ss_dssp SCCEEEEC-T---TTHHHHHHHHHHTTCSEEEEECS-SCC-SS--CC-----CC-----CHHHHHHHCSSCEEEECCCS-
T ss_pred CeEEEEeC-C---ccHHHHHHHHHHCCCCEEEEeCC-ccc-cc--cC-----CCcccHHHHHHHHHhcCCCEEECCcCC-
Confidence 46677774 2 24455666776789999999843 211 11 11 122122336788888999999985443
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh-------CC-
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM-------FP- 715 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~-------~~- 715 (842)
.+.|+.+.++|+|+|+++|.... ++...+ .|. ..+..+.++++. ++
T Consensus 222 ---~e~a~~~~~~Gad~i~vg~Gg~~-----------------~~~~~~--~g~----~~~~~l~~v~~~~~~~~~~~~~ 275 (393)
T 2qr6_A 222 ---YTTALHMMRTGAVGIIVGGGENT-----------------NSLALG--MEV----SMATAIADVAAARRDYLDETGG 275 (393)
T ss_dssp ---HHHHHHHHTTTCSEEEESCCSCC-----------------HHHHTS--CCC----CHHHHHHHHHHHHHHHHHHHTS
T ss_pred ---HHHHHHHHHcCCCEEEECCCccc-----------------ccccCC--CCC----ChHHHHHHHHHHHHHhHhhcCC
Confidence 24488889999999999652100 000001 122 246666666655 43
Q ss_pred -CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc----------cC-----------c------------hhHH----
Q psy16199 716 -NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN----------QD-----------F------------TVVD---- 757 (842)
Q Consensus 716 -~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~----------~g-----------p------------~~~~---- 757 (842)
++|||++|||+++.|+.+++++||++|++||+++. +| . .+..
T Consensus 276 ~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g 355 (393)
T 2qr6_A 276 RYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHG 355 (393)
T ss_dssp CCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHC
T ss_pred cceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHhcc
Confidence 29999999999999999999999999999999731 11 0 1222
Q ss_pred ---------HHHHHHHHHHHhcCC-CccccCC
Q psy16199 758 ---------DYITGLQTLLYLKST-QLKGWDG 779 (842)
Q Consensus 758 ---------~i~~~l~~~m~~~g~-~i~~~~~ 779 (842)
.+.++|+..|...|+ +++|+..
T Consensus 356 ~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~ 387 (393)
T 2qr6_A 356 PSTMPWGVENFEGGLKRALAKCGYTDLKSFQK 387 (393)
T ss_dssp CCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTT
T ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCHHHHhh
Confidence 346999999999999 9999864
No 136
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.43 E-value=3.8e-12 Score=148.71 Aligned_cols=141 Identities=13% Similarity=0.164 Sum_probs=89.8
Q ss_pred eecceeEeecC-CCCccccc-cCCC---------------------------CCCCHHHHHHHHHHHHhcC--cEEEece
Q psy16199 24 LSKDLPDIERP-VAALPDSS-EIPQ---------------------------YRLPFDAVNFEVELVKDLG--VKIECER 72 (842)
Q Consensus 24 ~g~~V~l~Ek~-~~GG~~~~-~iP~---------------------------~~~~~~~v~~~~~~l~~~g--V~i~~~~ 72 (842)
.|++|+|+|+. .+||.+.. ..|. +....++.++....+++++ +++++++
T Consensus 38 ~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~ 117 (542)
T 1w4x_A 38 LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHT 117 (542)
T ss_dssp TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSC
T ss_pred CCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCc
Confidence 38999999996 78886521 1110 0111245555555566665 5678887
Q ss_pred eecc---------ccceeccccccCCCEEEEccCCC-CCCCCCCCCCCccccC-ceehhcchHHHhhcccCCccCCCCCC
Q psy16199 73 SLST---------RDITIEKLRKDGYTAIFIGIGKP-NANVIPIFQGLTEEMG-FYTSKTFLPRVATSSKKGLCGGCKKE 141 (842)
Q Consensus 73 ~v~~---------~~v~~~~~~~~~yd~lVlAtGs~-~~~~~~i~~G~~~~~g-v~~~~~~l~~~~~~~~~~~c~~c~~~ 141 (842)
.|.. ..|+.+++..+.+|+||+|||.. .|+.+++| |++...| ++++..+.. +
T Consensus 118 ~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~-G~~~f~G~~~hs~~~~~--------------~-- 180 (542)
T 1w4x_A 118 TVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFP-GLKDFAGNLYHTGNWPH--------------E-- 180 (542)
T ss_dssp CEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCT-TGGGCCSEEEEGGGCCS--------------S--
T ss_pred EEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCC-CcccCCCceEECCCCCC--------------c--
Confidence 6542 12334444456799999999963 36667787 7655555 233222210 0
Q ss_pred CCCCCCCcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 142 SLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 142 ~~~~~~~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
.....+++|+|||+|.+|+|+|..+.+.+. +|+++.|.+.
T Consensus 181 ~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~-~vtv~~r~~~ 220 (542)
T 1w4x_A 181 PVDFSGQRVGVIGTGSSGIQVSPQIAKQAA-ELFVFQRTPH 220 (542)
T ss_dssp CCCCBTCEEEEECCSHHHHHHHHHHHHHBS-EEEEEESSCC
T ss_pred hhccCCCEEEEECCCccHHHHHHHHhhcCc-eEEEEEcCCc
Confidence 011223459999999999999999999975 5999998763
No 137
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.39 E-value=1.8e-12 Score=133.35 Aligned_cols=123 Identities=23% Similarity=0.262 Sum_probs=97.6
Q ss_pred HHHHhhcCcCEEE--EeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe---cCChh--cHHHHHHHHHH
Q psy16199 583 SKKTEKAGADALE--LNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL---TPNIT--NITDIAKAAYE 655 (842)
Q Consensus 583 a~~~~~agaD~ie--lN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl---~p~~~--~~~~~a~~~~~ 655 (842)
++++.+.|||.|+ +|++|-. . .+.+.+.+.++++++.++ |+++|+ +++++ ++.++++.+.+
T Consensus 76 ~~~A~~~Gad~Id~viN~g~~~-----~------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~e 143 (225)
T 1mzh_A 76 AVEAVRDGAQELDIVWNLSAFK-----S------EKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIE 143 (225)
T ss_dssp HHHHHHTTCSEEEEECCHHHHH-----T------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEecHHHHh-----c------CChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4566667999999 7998831 1 345677788999999988 999999 77665 48899999999
Q ss_pred CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHH
Q psy16199 656 GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQF 734 (842)
Q Consensus 656 ~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~ 734 (842)
+|+|+| .+||-. ..|| .+++.++.+++.++ ++||+++|||+|++|+.++
T Consensus 144 aGad~I-~tstg~---------------------~~gg--------a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~ 193 (225)
T 1mzh_A 144 AGADFI-KTSTGF---------------------APRG--------TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISM 193 (225)
T ss_dssp HTCSEE-ECCCSC---------------------SSSC--------CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHH
T ss_pred hCCCEE-EECCCC---------------------CCCC--------CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHH
Confidence 999999 666511 0122 23788888888763 6999999999999999999
Q ss_pred HHhCCCEEEEehh
Q psy16199 735 IQAGAHAVQICSA 747 (842)
Q Consensus 735 l~~GA~~Vqv~ta 747 (842)
+++||+.|+++++
T Consensus 194 l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 194 IEAGADRIGTSSG 206 (225)
T ss_dssp HHTTCSEEEESCH
T ss_pred HHhCchHHHHccH
Confidence 9999998877754
No 138
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.37 E-value=1.9e-11 Score=132.84 Aligned_cols=165 Identities=18% Similarity=0.185 Sum_probs=121.4
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHH
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAY 654 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~ 654 (842)
.++..+.++++.++|+|.|+++.++.+ ++.+.++++++++.. ++||++|-..+ .+.|+.+.
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G~--------------~~~~~e~I~~ir~~~~~~~Vi~G~V~T----~e~A~~a~ 159 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHAH--------------AKYVGKTLKSLRQLLGSRCIMAGNVAT----YAGADYLA 159 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCCS--------------SHHHHHHHHHHHHHHTTCEEEEEEECS----HHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCCC--------------cHhHHHHHHHHHHhcCCCeEEEcCcCC----HHHHHHHH
Confidence 456677888888899999999875432 246678999999986 79999984333 34589999
Q ss_pred HCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHH
Q psy16199 655 EGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQF 734 (842)
Q Consensus 655 ~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~ 734 (842)
++|+|+|.++|.-+.. .. .+... |. | .| .+..|.++++.. . |||+.|||.++.|+.++
T Consensus 160 ~aGaD~I~Vg~g~G~~------------~~--tr~~~-g~-g---~p-~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kA 217 (361)
T 3r2g_A 160 SCGADIIKAGIGGGSV------------CS--TRIKT-GF-G---VP-MLTCIQDCSRAD-R-SIVADGGIKTSGDIVKA 217 (361)
T ss_dssp HTTCSEEEECCSSSSC------------HH--HHHHH-CC-C---CC-HHHHHHHHTTSS-S-EEEEESCCCSHHHHHHH
T ss_pred HcCCCEEEEcCCCCcC------------cc--ccccC-Cc-c---HH-HHHHHHHHHHhC-C-CEEEECCCCCHHHHHHH
Confidence 9999999995431110 00 00000 11 1 22 467777776665 3 99999999999999999
Q ss_pred HHhCCCEEEEehhhhcc---------------------------------------------------C--chhHHHHHH
Q psy16199 735 IQAGAHAVQICSAVQNQ---------------------------------------------------D--FTVVDDYIT 761 (842)
Q Consensus 735 l~~GA~~Vqv~ta~l~~---------------------------------------------------g--p~~~~~i~~ 761 (842)
|++||++|||||+|+.. | -.++..|..
T Consensus 218 La~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~ 297 (361)
T 3r2g_A 218 LAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIG 297 (361)
T ss_dssp HHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHH
T ss_pred HHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhccccccccCCcceeecCCCCCHHHHHHHHHH
Confidence 99999999999998721 1 145778889
Q ss_pred HHHHHHHhcCC-CccccCCC
Q psy16199 762 GLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 762 ~l~~~m~~~g~-~i~~~~~~ 780 (842)
+|+.-|...|+ +|++++.+
T Consensus 298 glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 298 GLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp HHHHHHHHTTCSSHHHHHHT
T ss_pred HHHHHhhhcCcccHHHHHhC
Confidence 99999999999 99999544
No 139
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.36 E-value=8.9e-12 Score=144.27 Aligned_cols=171 Identities=16% Similarity=0.146 Sum_probs=126.7
Q ss_pred CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHH
Q psy16199 573 TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAK 651 (842)
Q Consensus 573 g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~ 651 (842)
|.+.+ +.+.++.+.++|+|+|++|.+|- +++...++++++++.+ ++||++|-..+ .+.|+
T Consensus 251 G~~~~-~~~~a~~~~~aG~d~v~i~~~~G--------------~~~~~~~~i~~i~~~~~~~pvi~~~v~t----~~~a~ 311 (514)
T 1jcn_A 251 GTRED-DKYRLDLLTQAGVDVIVLDSSQG--------------NSVYQIAMVHYIKQKYPHLQVIGGNVVT----AAQAK 311 (514)
T ss_dssp CSSTT-HHHHHHHHHHTTCSEEEECCSCC--------------CSHHHHHHHHHHHHHCTTCEEEEEEECS----HHHHH
T ss_pred cCchh-hHHHHHHHHHcCCCEEEeeccCC--------------cchhHHHHHHHHHHhCCCCceEecccch----HHHHH
Confidence 43444 45556667778999999998652 2356789999999998 89999974332 45689
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHH
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVA 731 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da 731 (842)
.+.++|+|+|++++..++. ..+ +.. .+ .|.+ .+.++..+.++++.+ ++|||++|||.++.|+
T Consensus 312 ~l~~aGad~I~vg~~~G~~-----~~t---------~~~-~~-~g~~-~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di 373 (514)
T 1jcn_A 312 NLIDAGVDGLRVGMGCGSI-----CIT---------QEV-MA-CGRP-QGTAVYKVAEYARRF-GVPIIADGGIQTVGHV 373 (514)
T ss_dssp HHHHHTCSEEEECSSCSCC-----BTT---------BCC-CS-CCCC-HHHHHHHHHHHHGGG-TCCEEEESCCCSHHHH
T ss_pred HHHHcCCCEEEECCCCCcc-----ccc---------ccc-cC-CCcc-chhHHHHHHHHHhhC-CCCEEEECCCCCHHHH
Confidence 9999999999994422211 000 000 00 1111 355688888998887 7999999999999999
Q ss_pred HHHHHhCCCEEEEehhhhcc------------------------------------------------C-----------
Q psy16199 732 LQFIQAGAHAVQICSAVQNQ------------------------------------------------D----------- 752 (842)
Q Consensus 732 ~~~l~~GA~~Vqv~ta~l~~------------------------------------------------g----------- 752 (842)
.+++++||++|++||+++.. |
T Consensus 374 ~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~g~~ 453 (514)
T 1jcn_A 374 VKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSI 453 (514)
T ss_dssp HHHHHTTCSEEEESTTTTTSTTSSCC--------------------------------------------------CCCH
T ss_pred HHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccccccceecccceecCCCcccH
Confidence 99999999999999988631 1
Q ss_pred chhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 753 FTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 753 p~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
..++..|..+|+..|...|+ ++++++..
T Consensus 454 ~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 454 QKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 25567889999999999999 99998753
No 140
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.35 E-value=2.1e-11 Score=133.46 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=123.5
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhh-cCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEK-AGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN 642 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~-agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~ 642 (842)
++.+.+ +.+.+++..+...++. +|+|+|+++++- .++..+.+.++++++.+ ++||++|...+
T Consensus 108 ~v~~~~--g~~~~~~~~~~~l~~~~~g~~~i~i~~~~--------------g~~~~~~~~i~~lr~~~~~~~vi~g~v~t 171 (351)
T 2c6q_A 108 HLAASS--GTGSSDFEQLEQILEAIPQVKYICLDVAN--------------GYSEHFVEFVKDVRKRFPQHTIMAGNVVT 171 (351)
T ss_dssp TEEEEE--CSSHHHHHHHHHHHHHCTTCCEEEEECSC--------------TTBHHHHHHHHHHHHHCTTSEEEEEEECS
T ss_pred eeEeec--CCChHHHHHHHHHHhccCCCCEEEEEecC--------------CCcHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 355555 4556666554444432 389999997531 13466789999999998 89999986543
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
.+.|+.+.++|+|+|+++|.-+.. .. .+...| . |.+ ...++..+.+..+.. ++|||+.
T Consensus 172 ----~e~A~~a~~aGaD~I~v~~g~G~~-----~~---------~r~~~g-~-~~p-~~~~l~~v~~~~~~~-~ipvIa~ 229 (351)
T 2c6q_A 172 ----GEMVEELILSGADIIKVGIGPGSV-----CT---------TRKKTG-V-GYP-QLSAVMECADAAHGL-KGHIISD 229 (351)
T ss_dssp ----HHHHHHHHHTTCSEEEECSSCSTT-----BC---------HHHHHC-B-CCC-HHHHHHHHHHHHHHT-TCEEEEE
T ss_pred ----HHHHHHHHHhCCCEEEECCCCCcC-----cC---------ccccCC-C-Ccc-HHHHHHHHHHHHhhc-CCcEEEe
Confidence 356899999999999997642210 00 000011 1 111 112333344444444 6999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhc-----------------------------------------cC---------
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQN-----------------------------------------QD--------- 752 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~-----------------------------------------~g--------- 752 (842)
|||.++.|+.++|++||++|+|||+|+. +|
T Consensus 230 GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g 309 (351)
T 2c6q_A 230 GGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKG 309 (351)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCB
T ss_pred CCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccccccceEEEeeccC
Confidence 9999999999999999999999999972 23
Q ss_pred --chhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 753 --FTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 753 --p~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
-.++..|..+|+.-|...|+ +++|++..
T Consensus 310 ~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~ 340 (351)
T 2c6q_A 310 DVEHTIRDILGGIRSTCTYVGAAKLKELSRR 340 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCSBGGGHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCCHHHHhhC
Confidence 25677889999999999999 99998643
No 141
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.33 E-value=2.7e-12 Score=133.01 Aligned_cols=155 Identities=16% Similarity=0.159 Sum_probs=102.3
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc----------------cc--------c---CCHHHH-HHHHhc-C
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT----------------NI--------R---AVPEEV-QLAWEE-K 199 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~----------------~~--------~---~~~~~~-~~~~~~-g 199 (842)
.|+|||||.+|+++|..|++.|.+ |+++++.... .. + .....+ +.+.+. |
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g~~-v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKGVR-VGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 499999999999999999999975 9999986210 00 0 001111 234454 9
Q ss_pred cEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcC-------------------Ch
Q psy16199 200 CEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL-------------------DN 260 (842)
Q Consensus 200 V~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~-------------------~~ 260 (842)
++++ ++.++++..+++++..|.+.+ |+ ++.+|.||+|+|..+. ..
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~~-------------g~--~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~ 147 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTWE-------------GP--PARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYP 147 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEETT-------------SC--CEECSEEEECCTTCSSCEEEETTEEESEEETTEECCS
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEECC-------------CC--EEECCEEEECCCCChhhceecCCccCCCCCCcccchh
Confidence 9998 568888875566665565432 22 6899999999998421 11
Q ss_pred hHHh---hcCCcccCCCC--------C-------eeeC-----CCC-CCCCCCCeEEeccCCCCchhHHHHHHHHHHHHH
Q psy16199 261 DVLE---AIKPVKLDKYG--------Y-------PEVN-----YTT-MATSVPGVFCGGDTANLSDTTVESVNDGKTAAW 316 (842)
Q Consensus 261 ~l~~---~l~gl~~~~~G--------~-------i~vd-----~~~-~~Ts~~gVfa~GD~~~~~~~~~~A~~~G~~aA~ 316 (842)
.+.+ .. |+++++.. . .... ... ..|++|+||++|||+ ...+...|+.||+.+|.
T Consensus 148 ~l~~~l~~~-g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~ 225 (232)
T 2cul_A 148 DLLEDLSRL-GFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAE 225 (232)
T ss_dssp HHHHHHHHT-TCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHH
T ss_pred hhCHHHHhC-CCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHH
Confidence 2222 22 33333111 0 0000 001 137999999999999 77788889999999999
Q ss_pred HHHHHH
Q psy16199 317 HIHKYI 322 (842)
Q Consensus 317 ~I~~~L 322 (842)
+|.+.|
T Consensus 226 ~i~~~l 231 (232)
T 2cul_A 226 HLLHEL 231 (232)
T ss_dssp HHHHHC
T ss_pred HHHhhc
Confidence 998764
No 142
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.30 E-value=1.2e-11 Score=136.07 Aligned_cols=159 Identities=17% Similarity=0.211 Sum_probs=120.8
Q ss_pred HhHHHHHHHHHhhcCcCEEEEec---------cCCCCCC-CCCCcccCCCCHHHHHHHHHHHHhhCC-ccEEEEecCCh-
Q psy16199 576 KDDWLELSKKTEKAGADALELNL---------SCPHGMG-ERGMGLACGQDPEMVRNISLWVRSSVK-IPFFVKLTPNI- 643 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~---------scP~~~~-~~~~G~~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~p~~- 643 (842)
.++|.++|+++.++|+|+||||. -||.+.. ...||+++..+.+++.|++++||+.+. -+|.||++++-
T Consensus 151 i~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~ 230 (358)
T 4a3u_A 151 LDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGE 230 (358)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSC
T ss_pred HHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcc
Confidence 57899999999999999999985 3895443 445999999999999999999999873 46999998741
Q ss_pred ----------hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 644 ----------TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 644 ----------~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.....+++.+.+.|++.+.++...... .. ++...+ .+..++++.
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~----~~~~~~---~~a~~ik~~ 284 (358)
T 4a3u_A 231 IQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDG-------------------TF----GKTDQP---KLSPEIRKV 284 (358)
T ss_dssp BTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTC-------------------SS----SBCSSC---CCHHHHHHH
T ss_pred cCCCcccchHHHHHHHHHhhhccCccccccccccccC-------------------cc----cccccH---HHHHHHHHh
Confidence 134567888899999999986532110 00 001111 123456666
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
. ..||+ +||+.+++++.++|+.| ||+|.++|+++. +|+|+++++++.
T Consensus 285 ~-~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la-dPdlp~k~~~g~ 332 (358)
T 4a3u_A 285 F-KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIG-NPDLPRRFFEKA 332 (358)
T ss_dssp C-CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH-CTTHHHHHHHTC
T ss_pred c-CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh-ChhHHHHHHhCC
Confidence 6 46665 67789999999999998 999999999995 599999998875
No 143
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.27 E-value=4.4e-11 Score=130.54 Aligned_cols=134 Identities=19% Similarity=0.195 Sum_probs=106.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+.++++. .+ .++.+.++.+.++|+|+|++|.++|. ++++++++ .++||++|+..
T Consensus 64 ~p~gvnl~~-~~-~~~~~~~~~a~~~g~d~V~~~~g~p~-------------------~~i~~l~~-~g~~v~~~v~~-- 119 (332)
T 2z6i_A 64 KPFGVNIML-LS-PFVEDIVDLVIEEGVKVVTTGAGNPS-------------------KYMERFHE-AGIIVIPVVPS-- 119 (332)
T ss_dssp SCEEEEECT-TS-TTHHHHHHHHHHTTCSEEEECSSCGG-------------------GTHHHHHH-TTCEEEEEESS--
T ss_pred CCEEEEecC-CC-CCHHHHHHHHHHCCCCEEEECCCChH-------------------HHHHHHHH-cCCeEEEEeCC--
Confidence 688888864 23 34777888888889999999998872 34666665 48999999843
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+.++.+.+.|+|+|++.+. ..||++| .+..+.++.++++.+ ++|||++|
T Consensus 120 ---~~~a~~~~~~GaD~i~v~g~-----------------------~~GG~~g---~~~~~~ll~~i~~~~-~iPViaaG 169 (332)
T 2z6i_A 120 ---VALAKRMEKIGADAVIAEGM-----------------------EAGGHIG---KLTTMTLVRQVATAI-SIPVIAAG 169 (332)
T ss_dssp ---HHHHHHHHHTTCSCEEEECT-----------------------TSSEECC---SSCHHHHHHHHHHHC-SSCEEEES
T ss_pred ---HHHHHHHHHcCCCEEEEECC-----------------------CCCCCCC---CccHHHHHHHHHHhc-CCCEEEEC
Confidence 35678899999999999542 1244444 234578899999988 79999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
||.+++++.+++++||++|+|+|+++..
T Consensus 170 GI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 170 GIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred CCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 9999999999999999999999999954
No 144
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.27 E-value=3.1e-11 Score=131.52 Aligned_cols=255 Identities=14% Similarity=0.075 Sum_probs=154.1
Q ss_pred ccccccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcc
Q psy16199 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGS 421 (842)
Q Consensus 342 ~i~~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 421 (842)
..+..+|+++++|++|+||+++||++.+.+.+.++.....|||++++||++.+|.. +|++||+.+. ..+
T Consensus 31 ~~~~~~L~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~-GNp~PR~~~~----------~~~ 99 (354)
T 4ef8_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALRE-GNPTPRYQAL----------PLG 99 (354)
T ss_dssp ---CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBC-CSCSCCEEEE----------TTE
T ss_pred CCCCCCcceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccC-CCCCCcEEec----------chh
Confidence 35667899999999999999999999999999999999999999999999998875 8999999864 257
Q ss_pred eeeeEeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhccccccCCccccc-CCCCCCCCCChhHHHHhhhhh--hCcc
Q psy16199 422 FLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQ-NGLPKRQINTPVETILSVKDV--IGQA 498 (842)
Q Consensus 422 ~~n~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~dk~~~~~~~~~~~~l~~~--~G~~ 498 (842)
++|..-++...++.|+ +. ++.++ +....||+++ .|.++..+ .++.+.+.+. .|+
T Consensus 100 ~iN~~G~~n~G~~~~~---~~--------------l~~~~--~~~~~pvivsI~G~~~~d~---~~~a~~l~~~~~~g~- 156 (354)
T 4ef8_A 100 SINSMGLPNNGFDFYL---AY--------------AAEQH--DYGKKPLFLSMSGLSMREN---VEMCKRLAAVATEKG- 156 (354)
T ss_dssp EEECCCCCBCCHHHHH---HH--------------HHHTC--CTTTCCEEEEECCSSHHHH---HHHHHHHHHHHHHHC-
T ss_pred hhccCCCCCcCHHHHH---HH--------------HHHHh--hcCCCcEEEEeccCCHHHH---HHHHHHHhhhhhcCC-
Confidence 8999666666666665 32 33332 2234677775 45554311 2223333311 011
Q ss_pred ccccccCccCCCcceeEeeccCCccccCCccccCCCcc-chhhhhcCcccccccccccccccc-ccccceEEEeccCCCH
Q psy16199 499 VQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDS-GYQAITFHPETHQAHVTDECTGCT-LCLSILIASIMCTYNK 576 (842)
Q Consensus 499 ~g~vt~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~-G~dai~~~~~~~~~~~~~~~~~~~-~~~~pvi~si~~g~~~ 576 (842)
|-=-+| ++|.|. |-.++..-++. ..+..+..+ ..+.||++=+.-+.+.
T Consensus 157 ---------------------d~ielN-----isCPn~~gg~~l~~~~e~----~~~il~av~~~~~~PV~vKi~p~~d~ 206 (354)
T 4ef8_A 157 ---------------------VILELN-----LSCPNVPGKPQVAYDFDA----MRQCLTAVSEVYPHSFGVKMPPYFDF 206 (354)
T ss_dssp ---------------------CEEEEE-----CSSCCSTTSCCGGGSHHH----HHHHHHHHHHHCCSCEEEEECCCCSH
T ss_pred ---------------------CEEEEe-----CCCCCCCCchhhccCHHH----HHHHHHHHHHhhCCCeEEEecCCCCH
Confidence 000133 234332 10000000110 000001111 2347999998766678
Q ss_pred hHHHHHHHHHhhcC-cCEEEE-ecc------CCCCCC-----CCCCcccCCC-CHHHHHHHHHHHHhhC-CccEEEEecC
Q psy16199 577 DDWLELSKKTEKAG-ADALEL-NLS------CPHGMG-----ERGMGLACGQ-DPEMVRNISLWVRSSV-KIPFFVKLTP 641 (842)
Q Consensus 577 e~~~~~a~~~~~ag-aD~iel-N~s------cP~~~~-----~~~~G~~~~~-~~~~~~~ii~~v~~~~-~~Pv~vKl~p 641 (842)
+++.++++.++++| +|+|.+ |-- .++... ...+|.--+. -...-.+++..+++.. ++||+. ..
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~--~G 284 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFG--CG 284 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEE--ES
T ss_pred HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEE--EC
Confidence 88999999988898 999975 210 011110 1111211111 1245567888888876 689875 34
Q ss_pred ChhcHHHHHHHHHHCCCCEEEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v 663 (842)
++.+..+..+.+ .+|||+|-+
T Consensus 285 GI~s~~da~~~l-~aGAd~V~v 305 (354)
T 4ef8_A 285 GVYTGEDAFLHV-LAGASMVQV 305 (354)
T ss_dssp CCCSHHHHHHHH-HHTEEEEEE
T ss_pred CcCCHHHHHHHH-HcCCCEEEE
Confidence 455666666666 589999988
No 145
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.26 E-value=9e-11 Score=128.87 Aligned_cols=263 Identities=16% Similarity=0.227 Sum_probs=154.6
Q ss_pred ccccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCccee
Q psy16199 344 DLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFL 423 (842)
Q Consensus 344 ~~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 423 (842)
+..+|+++++|++|+||+++||+ +..+++++....+.|||++++||+++.|.. +|++||+.+.. ...+++
T Consensus 46 ~~~~L~~~~~Gl~~~NPvglAaG-~~~~~~~~~~~~~~g~G~v~~ktvt~~pq~-GNp~PR~~~~~--------~~~~~i 115 (367)
T 3zwt_A 46 DSDMLEVRVLGHKFRNPVGIAAG-FDKHGEAVDGLYKMGFGFVEIGSVTPKPQE-GNPRPRVFRLP--------EDQAVI 115 (367)
T ss_dssp CCGGGCEEETTEEESSSEEECTT-SSTTSSSHHHHHHTTCSEEEEEEECSSCBC-CSCSCCEEEEG--------GGTEEE
T ss_pred CCCCCcEEECCEEcCCCCEeCCC-cCCCHHHHHHHHhcCcCeEEeCCccCCCCC-CCCCCeEEEec--------Ccccee
Confidence 44678999999999999999999 567789999999999999999999998876 89999998752 245799
Q ss_pred eeEeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhccc---cccCCcccccCCCCCCCCCChhHHHHhhhhhhCcccc
Q psy16199 424 NIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLK---KLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500 (842)
Q Consensus 424 n~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~~G~~~g 500 (842)
|. ++++|+|-- ...+++...++-. .....|++++=|-.|.+-.-+.+....+..+ + +.
T Consensus 116 N~---------------~G~~N~G~~-~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~-~-~~- 176 (367)
T 3zwt_A 116 NR---------------YGFNSHGLS-VVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVL-G-PL- 176 (367)
T ss_dssp EC---------------CCCCBCCHH-HHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHH-G-GG-
T ss_pred ec---------------cCCCCccHH-HHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHH-h-hh-
Confidence 99 788888721 1122222211100 0123577776444433212223333322222 1 00
Q ss_pred ccccCccCCCcceeEeeccCCccccCCccccCCCcc-chhhhhcCccccccccccccccc-----cccccceEEEeccCC
Q psy16199 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDS-GYQAITFHPETHQAHVTDECTGC-----TLCLSILIASIMCTY 574 (842)
Q Consensus 501 ~vt~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~-G~dai~~~~~~~~~~~~~~~~~~-----~~~~~pvi~si~~g~ 574 (842)
.|-=-+|. +|.|. |...+.. ++... ..-+..+.+ +..+.||++-+..+.
T Consensus 177 ------------------ad~ielNi-----sCPn~~G~~~l~~-~~~l~-~ll~av~~~~~~~~~~~~~Pv~vKi~p~~ 231 (367)
T 3zwt_A 177 ------------------ADYLVVNV-----SSPNTAGLRSLQG-KAELR-RLLTKVLQERDGLRRVHRPAVLVKIAPDL 231 (367)
T ss_dssp ------------------CSEEEEEC-----CCTTSTTGGGGGS-HHHHH-HHHHHHHHHHHTSCGGGCCEEEEEECSCC
T ss_pred ------------------CCEEEEEC-----CCCCCCCccccCC-HHHHH-HHHHHHHHHHhhccccCCceEEEEeCCCC
Confidence 01111342 44442 2111100 11000 000000000 013579999997666
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEec---cCCCCCC---CCCCcccCC-CCHHHHHHHHHHHHhhC--CccEEEEecCChhc
Q psy16199 575 NKDDWLELSKKTEKAGADALELNL---SCPHGMG---ERGMGLACG-QDPEMVRNISLWVRSSV--KIPFFVKLTPNITN 645 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~---scP~~~~---~~~~G~~~~-~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~~ 645 (842)
+.+++.++++.++++|+|+|.++= +.+.... ....|.--+ .......+++..+++.+ ++||+. ..++.+
T Consensus 232 ~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~--~GGI~s 309 (367)
T 3zwt_A 232 TSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG--VGGVSS 309 (367)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE--ESSCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE--ECCCCC
Confidence 778999999999999999999852 1221100 011111111 12345568899999988 789875 344555
Q ss_pred HHHHHHHHHHCCCCEEEE
Q psy16199 646 ITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 646 ~~~~a~~~~~~G~d~i~v 663 (842)
..+..+.+ ++|||+|-+
T Consensus 310 ~~da~~~l-~~GAd~V~v 326 (367)
T 3zwt_A 310 GQDALEKI-RAGASLVQL 326 (367)
T ss_dssp HHHHHHHH-HHTCSEEEE
T ss_pred HHHHHHHH-HcCCCEEEE
Confidence 55555555 489999988
No 146
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.26 E-value=1.7e-10 Score=126.57 Aligned_cols=146 Identities=23% Similarity=0.227 Sum_probs=101.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+.+++.. +. .+.++.+.++|+|.|+||.+. .+++.+.+.++++++..++||+++...+
T Consensus 96 ~pvga~ig~--~~---~e~a~~l~eaGad~I~ld~a~--------------G~~~~~~~~i~~i~~~~~~~Vivg~v~t- 155 (361)
T 3khj_A 96 LRVGAAIGV--NE---IERAKLLVEAGVDVIVLDSAH--------------GHSLNIIRTLKEIKSKMNIDVIVGNVVT- 155 (361)
T ss_dssp CCCEEEECT--TC---HHHHHHHHHTTCSEEEECCSC--------------CSBHHHHHHHHHHHHHCCCEEEEEEECS-
T ss_pred ceEEEEeCC--CH---HHHHHHHHHcCcCeEEEeCCC--------------CCcHHHHHHHHHHHHhcCCcEEEccCCC-
Confidence 577788743 22 555666677899999998532 2356778889999998899999976543
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+.++.+.++|+|+|.+....++ +.. .+. .-| .|.+ ...++..+.++++.+ ++|||++|
T Consensus 156 ---~e~A~~l~~aGaD~I~VG~~~Gs-----~~~---------tr~-~~g-~g~p-~~~~i~~v~~~~~~~-~iPVIA~G 214 (361)
T 3khj_A 156 ---EEATKELIENGADGIKVGIGPGS-----ICT---------TRI-VAG-VGVP-QITAIEKCSSVASKF-GIPIIADG 214 (361)
T ss_dssp ---HHHHHHHHHTTCSEEEECSSCCT-----TCC---------HHH-HTC-BCCC-HHHHHHHHHHHHHHH-TCCEEEES
T ss_pred ---HHHHHHHHHcCcCEEEEecCCCc-----CCC---------ccc-ccC-CCCC-cHHHHHHHHHHHhhc-CCeEEEEC
Confidence 45688999999999999432211 000 000 001 1111 112334444444455 69999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
||.+++|+.+++++||++||++|+|+.
T Consensus 215 GI~~~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 215 GIRYSGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp CCCSHHHHHHHHHHTCSEEEESTTTTT
T ss_pred CCCCHHHHHHHHHcCCCEEEEChhhhc
Confidence 999999999999999999999999993
No 147
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.23 E-value=8.6e-11 Score=135.45 Aligned_cols=168 Identities=18% Similarity=0.239 Sum_probs=121.5
Q ss_pred hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHH
Q psy16199 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYE 655 (842)
Q Consensus 577 e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~ 655 (842)
+++.+.++++.++|+|+|++|+.. .++....+.++++++.+ ++||+++-..+ .+.++.+.+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~--------------G~~~~~~e~i~~i~~~~p~~pvi~g~~~t----~e~a~~l~~ 297 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH--------------GHSRRVIETLEMIKADYPDLPVVAGNVAT----PEGTEALIK 297 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC--------------CSSHHHHHHHHHHHHHCTTSCEEEEEECS----HHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC--------------CchHHHHHHHHHHHHHCCCceEEeCCcCC----HHHHHHHHH
Confidence 567778888888999999997631 13467789999999998 79999975433 344688899
Q ss_pred CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHH
Q psy16199 656 GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFI 735 (842)
Q Consensus 656 ~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l 735 (842)
+|+|+|+++|..++. .. .+ ...+.+.+. ..++..+.+..+.. ++|||++|||.++.|+.+++
T Consensus 298 ~G~d~I~v~~~~G~~-----~~---------~~-~~~~~g~p~--~~~l~~v~~~~~~~-~ipvia~GGI~~~~di~kal 359 (494)
T 1vrd_A 298 AGADAVKVGVGPGSI-----CT---------TR-VVAGVGVPQ--LTAVMECSEVARKY-DVPIIADGGIRYSGDIVKAL 359 (494)
T ss_dssp TTCSEEEECSSCSTT-----CH---------HH-HHHCCCCCH--HHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHH
T ss_pred cCCCEEEEcCCCCcc-----cc---------cc-ccCCCCccH--HHHHHHHHHHHhhc-CCCEEEECCcCCHHHHHHHH
Confidence 999999996642210 00 00 011222121 12344444444445 79999999999999999999
Q ss_pred HhCCCEEEEehhhhc----------------------------------------------cC-----------chhHHH
Q psy16199 736 QAGAHAVQICSAVQN----------------------------------------------QD-----------FTVVDD 758 (842)
Q Consensus 736 ~~GA~~Vqv~ta~l~----------------------------------------------~g-----------p~~~~~ 758 (842)
++||++|++||+++. +| ..++..
T Consensus 360 a~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~ 439 (494)
T 1vrd_A 360 AAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGMVPYKGTVKDVVHQ 439 (494)
T ss_dssp HTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------CBCCEECCBCHHHHHHH
T ss_pred HcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcceEccCcCCCHHHHHHH
Confidence 999999999999961 22 266888
Q ss_pred HHHHHHHHHHhcCC-CccccCCC
Q psy16199 759 YITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 759 i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
+..+|+..|...|+ +++++...
T Consensus 440 l~~~l~~~~~~~G~~~~~~l~~~ 462 (494)
T 1vrd_A 440 LVGGLRSGMGYIGARTIKELQEK 462 (494)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCHHHHHhh
Confidence 89999999999999 99998643
No 148
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.22 E-value=6.7e-11 Score=135.48 Aligned_cols=174 Identities=20% Similarity=0.199 Sum_probs=123.9
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCCh
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNI 643 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~ 643 (842)
.+.+++ |...+ ..+.++.+.++|+|.|+||.+||+ .+.+.+.++++++.. ++||++.-..+
T Consensus 221 ~v~aav--G~~~d-~~~~a~~l~~aG~d~I~id~a~g~--------------~~~~~~~i~~ir~~~p~~~Vi~g~v~t- 282 (496)
T 4fxs_A 221 RVGAAV--GAAPG-NEERVKALVEAGVDVLLIDSSHGH--------------SEGVLQRIRETRAAYPHLEIIGGNVAT- 282 (496)
T ss_dssp CCEEEC--CSSSC-CHHHHHHHHHTTCSEEEEECSCTT--------------SHHHHHHHHHHHHHCTTCCEEEEEECS-
T ss_pred eeeeee--ccccc-hHHHHHHHHhccCceEEecccccc--------------chHHHHHHHHHHHHCCCceEEEcccCc-
Confidence 345555 44433 444455566679999999998874 256778999999987 89999964333
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh---hCCCCcEE
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK---MFPNFPIL 720 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~---~~~~ipIi 720 (842)
.+.|+.+.++|+|+|++.++-++.. ..+. ..|. |.+ .+..+.++++ .. ++|||
T Consensus 283 ---~e~a~~l~~aGaD~I~Vg~g~Gs~~--------------~tr~-~~g~-g~p----~~~~i~~v~~~~~~~-~iPVI 338 (496)
T 4fxs_A 283 ---AEGARALIEAGVSAVKVGIGPGSIC--------------TTRI-VTGV-GVP----QITAIADAAGVANEY-GIPVI 338 (496)
T ss_dssp ---HHHHHHHHHHTCSEEEECSSCCTTB--------------CHHH-HHCC-CCC----HHHHHHHHHHHHGGG-TCCEE
T ss_pred ---HHHHHHHHHhCCCEEEECCCCCcCc--------------cccc-ccCC-Ccc----HHHHHHHHHHHhccC-CCeEE
Confidence 3568899999999999865422210 0000 1111 222 2445555554 44 69999
Q ss_pred EecCcCCHHHHHHHHHhCCCEEEEehhhhcc-------------------------------------------------
Q psy16199 721 GIGGIDSADVALQFIQAGAHAVQICSAVQNQ------------------------------------------------- 751 (842)
Q Consensus 721 ~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~------------------------------------------------- 751 (842)
++|||.+++|+.+++++||++||+||+|+..
T Consensus 339 a~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg 418 (496)
T 4fxs_A 339 ADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEG 418 (496)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSB
T ss_pred EeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCc
Confidence 9999999999999999999999999998620
Q ss_pred --------C--chhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 752 --------D--FTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 752 --------g--p~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
| -.++..+..+|+.-|-..|+ +|++++.+
T Consensus 419 ~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 419 IEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 0 15688899999999999999 99998753
No 149
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.22 E-value=7.5e-11 Score=145.98 Aligned_cols=147 Identities=16% Similarity=0.093 Sum_probs=108.9
Q ss_pred CCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCC
Q psy16199 615 QDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693 (842)
Q Consensus 615 ~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG 693 (842)
.+++.+.++++++++.. ++||+||+.++ ..+...|+.+.++|+|+|++.|.-++.- ..|.. . ....
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~-~gi~~~A~~a~kAGAD~IvVsG~eGGTg-------asp~~---~-~~~~- 1076 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAE-IGIGTIAAGVAKANADIIQISGHDGGTG-------ASPLS---S-IKHA- 1076 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECS-TTHHHHHHHHHHTTCSEEEEECTTCCCS-------SEEHH---H-HHHB-
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCC-CChHHHHHHHHHcCCCEEEEeCCCCccC-------CCcch---h-hcCC-
Confidence 45788889999999998 89999999986 3556788999999999999976532210 00000 0 0011
Q ss_pred CCCCccccchHHHHHHHHhhC------CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc----------------
Q psy16199 694 VSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ---------------- 751 (842)
Q Consensus 694 ~sG~~~~p~al~~v~~i~~~~------~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~---------------- 751 (842)
|. | +...+.++++.+ .++|||++|||.|+.|+.+++++||++||+||++|..
T Consensus 1077 --Gl---P-t~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~ 1150 (1520)
T 1ofd_A 1077 --GS---P-WELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPV 1150 (1520)
T ss_dssp --CC---C-HHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTT
T ss_pred --ch---h-HHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCc
Confidence 11 1 123344443322 1599999999999999999999999999999999752
Q ss_pred -----Cc--------------hhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 752 -----DF--------------TVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 752 -----gp--------------~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
+| .++..+.++|+.+|...|+ ++++++|+
T Consensus 1151 Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr 1199 (1520)
T 1ofd_A 1151 GVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGR 1199 (1520)
T ss_dssp SSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTC
T ss_pred eeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCc
Confidence 11 2688999999999999999 99999865
No 150
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.22 E-value=1.1e-10 Score=133.73 Aligned_cols=174 Identities=20% Similarity=0.246 Sum_probs=124.1
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChh
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNIT 644 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~ 644 (842)
+.+.+ |.+.+ ..+.++.+.++|+|.|+||.++++ +..+.+.++++++.. ++||+++-..+
T Consensus 220 v~aav--G~~~~-~~~~a~~l~~aG~d~I~id~a~g~--------------~~~~~~~v~~i~~~~p~~~Vi~g~v~t-- 280 (490)
T 4avf_A 220 VGAAV--GTGAD-TGERVAALVAAGVDVVVVDTAHGH--------------SKGVIERVRWVKQTFPDVQVIGGNIAT-- 280 (490)
T ss_dssp CEEEE--CSSTT-HHHHHHHHHHTTCSEEEEECSCCS--------------BHHHHHHHHHHHHHCTTSEEEEEEECS--
T ss_pred eeeee--ccccc-hHHHHHHHhhcccceEEecccCCc--------------chhHHHHHHHHHHHCCCceEEEeeeCc--
Confidence 34444 44444 445566666789999999988764 356778999999987 78999963332
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC--CCcEEEe
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--NFPILGI 722 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~--~ipIi~~ 722 (842)
.+.|+.+.++|+|+|.+.++-++. .. .+ ...|. |.+ .+..+.++++.+. ++|||++
T Consensus 281 --~e~a~~l~~aGaD~I~vg~g~Gs~------------~~--t~-~~~g~-g~p----~~~~l~~v~~~~~~~~iPVIa~ 338 (490)
T 4avf_A 281 --AEAAKALAEAGADAVKVGIGPGSI------------CT--TR-IVAGV-GVP----QISAIANVAAALEGTGVPLIAD 338 (490)
T ss_dssp --HHHHHHHHHTTCSEEEECSSCSTT------------CH--HH-HHTCB-CCC----HHHHHHHHHHHHTTTTCCEEEE
T ss_pred --HHHHHHHHHcCCCEEEECCCCCcC------------CC--cc-ccCCC-Ccc----HHHHHHHHHHHhccCCCcEEEe
Confidence 356899999999999995432110 00 00 01111 111 3566666665431 6999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhcc-------------------C-------------------------------
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQ-------------------D------------------------------- 752 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~-------------------g------------------------------- 752 (842)
|||.+++|+.+++++||++||+||+|+.. |
T Consensus 339 GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~~e 418 (490)
T 4avf_A 339 GGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLVPE 418 (490)
T ss_dssp SCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC----------------------------------
T ss_pred CCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhcccccccccccCC
Confidence 99999999999999999999999998630 0
Q ss_pred ------------chhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 753 ------------FTVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 753 ------------p~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
-.++.++..+|+.-|...|+ +|++++.+
T Consensus 419 g~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 419 GIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp -----CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred CcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 14677888999999999999 99999764
No 151
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.22 E-value=1.4e-10 Score=125.96 Aligned_cols=134 Identities=17% Similarity=0.180 Sum_probs=105.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+.++++. .+ .++.+.++.+.++|+|+|.++.++|. ++++++++ .++||+++++.
T Consensus 78 ~p~gVnl~~-~~-~~~~~~~~~~~~~g~d~V~l~~g~p~-------------------~~~~~l~~-~g~~v~~~v~s-- 133 (326)
T 3bo9_A 78 KPFGVNIIL-VS-PWADDLVKVCIEEKVPVVTFGAGNPT-------------------KYIRELKE-NGTKVIPVVAS-- 133 (326)
T ss_dssp SCEEEEEET-TS-TTHHHHHHHHHHTTCSEEEEESSCCH-------------------HHHHHHHH-TTCEEEEEESS--
T ss_pred CCEEEEEec-cC-CCHHHHHHHHHHCCCCEEEECCCCcH-------------------HHHHHHHH-cCCcEEEEcCC--
Confidence 688888864 22 34666777777789999999987762 34566665 47899988753
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+.++.+.+.|+|+|++.+. ..||++|. ...++++.++++.+ ++|||++|
T Consensus 134 ---~~~a~~a~~~GaD~i~v~g~-----------------------~~GG~~G~---~~~~~ll~~i~~~~-~iPviaaG 183 (326)
T 3bo9_A 134 ---DSLARMVERAGADAVIAEGM-----------------------ESGGHIGE---VTTFVLVNKVSRSV-NIPVIAAG 183 (326)
T ss_dssp ---HHHHHHHHHTTCSCEEEECT-----------------------TSSEECCS---SCHHHHHHHHHHHC-SSCEEEES
T ss_pred ---HHHHHHHHHcCCCEEEEECC-----------------------CCCccCCC---ccHHHHHHHHHHHc-CCCEEEEC
Confidence 35578889999999999653 13555552 34688999999888 79999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
||.+++|+.+++++||++|+|+|+++..
T Consensus 184 GI~~~~dv~~al~~GA~gV~vGs~~~~~ 211 (326)
T 3bo9_A 184 GIADGRGMAAAFALGAEAVQMGTRFVAS 211 (326)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESHHHHTB
T ss_pred CCCCHHHHHHHHHhCCCEEEechHHHcC
Confidence 9999999999999999999999999954
No 152
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.21 E-value=1.3e-10 Score=143.59 Aligned_cols=148 Identities=16% Similarity=0.146 Sum_probs=110.0
Q ss_pred CCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCC
Q psy16199 615 QDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693 (842)
Q Consensus 615 ~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG 693 (842)
.+++.+.++++++++.+ ++||+||+.++ ..+...|+.+.++|+|+|++.|.-+++-. .|.. . ....|
T Consensus 975 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~-~gi~~~A~~a~~AGAD~IvVsG~eGGTga-------sp~~---~-~~~~G 1042 (1479)
T 1ea0_A 975 YSIEDLAQLIYDLKQINPDAKVTVKLVSR-SGIGTIAAGVAKANADIILISGNSGGTGA-------SPQT---S-IKFAG 1042 (1479)
T ss_dssp SSHHHHHHHHHHHHHHCTTCEEEEEEECC-TTHHHHHHHHHHTTCSEEEEECTTCCCSS-------EETT---H-HHHSC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEcCC-CChHHHHHHHHHcCCcEEEEcCCCCCCCC-------Cchh---h-hcCCc
Confidence 34677889999999998 89999999986 35566789999999999999775332100 0000 0 00111
Q ss_pred CCCCccccchHHHHHHHHhhC------CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc----------------
Q psy16199 694 VSGNATRPMGLKAVSSIAKMF------PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ---------------- 751 (842)
Q Consensus 694 ~sG~~~~p~al~~v~~i~~~~------~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~---------------- 751 (842)
+ | +...+.++++.+ .++|||++|||.|+.|+.+++++||++||+||++|..
T Consensus 1043 ~------P-t~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~ 1115 (1479)
T 1ea0_A 1043 L------P-WEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPV 1115 (1479)
T ss_dssp C------C-HHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTT
T ss_pred h------h-HHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCc
Confidence 1 2 123444444432 2699999999999999999999999999999999741
Q ss_pred -----Cc--------------hhHHHHHHHHHHHHHhcCC-CccccCCCC
Q psy16199 752 -----DF--------------TVVDDYITGLQTLLYLKST-QLKGWDGQS 781 (842)
Q Consensus 752 -----gp--------------~~~~~i~~~l~~~m~~~g~-~i~~~~~~~ 781 (842)
+| .++..+.++|+.+|...|+ +++++++..
T Consensus 1116 Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~ 1165 (1479)
T 1ea0_A 1116 GVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRT 1165 (1479)
T ss_dssp SSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCG
T ss_pred eeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCch
Confidence 12 3788999999999999999 999997763
No 153
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.19 E-value=1.4e-10 Score=121.24 Aligned_cols=201 Identities=15% Similarity=0.144 Sum_probs=130.3
Q ss_pred cceEEEeccCCCH-hHHHHHHHHHhhcCcCEEEEe--ccCCCCCCCCC-----CcccCCCCHHHHHHHHHHHHhhCCccE
Q psy16199 564 SILIASIMCTYNK-DDWLELSKKTEKAGADALELN--LSCPHGMGERG-----MGLACGQDPEMVRNISLWVRSSVKIPF 635 (842)
Q Consensus 564 ~pvi~si~~g~~~-e~~~~~a~~~~~agaD~ielN--~scP~~~~~~~-----~G~~~~~~~~~~~~ii~~v~~~~~~Pv 635 (842)
.++++|++++... +++.+.++.++++ +|.||++ +|+|...+..- ....-+.+.....++++.+++.+++||
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv 83 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPI 83 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCE
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCE
Confidence 5789999987432 7999999999998 9999999 67885321000 000012366778899999999999999
Q ss_pred EEEecCCh---hcHHHHHHHHHHCCCCEEEEecCCCc----------------cccCCCCCCCCCc---c-c-CCCc---
Q psy16199 636 FVKLTPNI---TNITDIAKAAYEGKADGVSAINTVSG----------------LMSLSADGNPWPA---V-G-TKKL--- 688 (842)
Q Consensus 636 ~vKl~p~~---~~~~~~a~~~~~~G~d~i~v~nt~~~----------------~~~~~~~~~~~p~---~-~-~~~~--- 688 (842)
.+....+. ..+.+.++.+.++|+|+|++.+.... ...+... +.... + . ..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~-t~~e~~~~~~~~~d~~i~~ 162 (248)
T 1geq_A 84 VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPN-TPDERLKVIDDMTTGFVYL 162 (248)
T ss_dssp EEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTT-CCHHHHHHHHHHCSSEEEE
T ss_pred EEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCC-CHHHHHHHHHhcCCCeEEE
Confidence 98763221 13468899999999999999642210 0001110 00000 0 0 0000
Q ss_pred cccCCCCCCc--cccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc---CchhHHHHHHHH
Q psy16199 689 TTYGGVSGNA--TRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ---DFTVVDDYITGL 763 (842)
Q Consensus 689 ~~~gG~sG~~--~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~---gp~~~~~i~~~l 763 (842)
-...|+.|.. ..|..++.++++++.. ++||++.|||++++++.+++.+||++|.+||+++.. ++..++++.+.+
T Consensus 163 ~~~~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~~~~~~~~~~~~ 241 (248)
T 1geq_A 163 VSLYGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKK 241 (248)
T ss_dssp ECCC-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHGGGCHHHHHHH
T ss_pred EECCccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhChHHHHHHHHHH
Confidence 0112333332 3356788999999988 799999999999999999999999999999999853 224445555555
Q ss_pred HHHH
Q psy16199 764 QTLL 767 (842)
Q Consensus 764 ~~~m 767 (842)
+..|
T Consensus 242 ~~~~ 245 (248)
T 1geq_A 242 VEEL 245 (248)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 154
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.17 E-value=3.5e-10 Score=129.97 Aligned_cols=176 Identities=19% Similarity=0.186 Sum_probs=121.2
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCCh
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNI 643 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~ 643 (842)
++.+.+ +.+.+. .+.++.+.++|+|.|++|..+|+ ...+.++++++++.. ++||+++-..+
T Consensus 246 ~V~aav--g~~~d~-~era~aLveaGvd~I~Id~a~g~--------------~~~v~~~i~~i~~~~~~~~vi~g~v~t- 307 (511)
T 3usb_A 246 LVGAAV--GVTADA-MTRIDALVKASVDAIVLDTAHGH--------------SQGVIDKVKEVRAKYPSLNIIAGNVAT- 307 (511)
T ss_dssp CCEEEE--CSSTTH-HHHHHHHHHTTCSEEEEECSCTT--------------SHHHHHHHHHHHHHCTTSEEEEEEECS-
T ss_pred eeeeee--eeccch-HHHHHHHHhhccceEEecccccc--------------hhhhhhHHHHHHHhCCCceEEeeeecc-
Confidence 455555 334444 44455666789999999987654 356778999999887 48999876443
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+.|+.+.++|+|+|.+.+.-++. . ..+ ...|+..+.+ .++..+.+..+.+ ++|||++|
T Consensus 308 ---~e~a~~~~~aGad~i~vg~g~gsi-----~---------~~~-~~~g~g~p~~--~~l~~v~~~~~~~-~iPVIa~G 366 (511)
T 3usb_A 308 ---AEATKALIEAGANVVKVGIGPGSI-----C---------TTR-VVAGVGVPQL--TAVYDCATEARKH-GIPVIADG 366 (511)
T ss_dssp ---HHHHHHHHHHTCSEEEECSSCSTT-----C---------CHH-HHHCCCCCHH--HHHHHHHHHHHTT-TCCEEEES
T ss_pred ---HHHHHHHHHhCCCEEEECCCCccc-----c---------ccc-cccCCCCCcH--HHHHHHHHHHHhC-CCcEEEeC
Confidence 356899999999999984332110 0 000 0112222211 1233333334444 69999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhcc----------------------------------------------------
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQ---------------------------------------------------- 751 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~---------------------------------------------------- 751 (842)
||.++.|+.+++++||++|++||+|+..
T Consensus 367 GI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~~~~ 446 (511)
T 3usb_A 367 GIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIEGRV 446 (511)
T ss_dssp CCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC----------------------------------C
T ss_pred CCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcEEeC
Confidence 9999999999999999999999998410
Q ss_pred ---C--chhHHHHHHHHHHHHHhcCC-CccccCC
Q psy16199 752 ---D--FTVVDDYITGLQTLLYLKST-QLKGWDG 779 (842)
Q Consensus 752 ---g--p~~~~~i~~~l~~~m~~~g~-~i~~~~~ 779 (842)
| ..++..+..+|+.-|...|+ ++++++.
T Consensus 447 ~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~ 480 (511)
T 3usb_A 447 PYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRE 480 (511)
T ss_dssp BCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHh
Confidence 0 14577888999999999999 9998864
No 155
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.17 E-value=2.2e-10 Score=124.50 Aligned_cols=85 Identities=16% Similarity=0.076 Sum_probs=70.8
Q ss_pred ccccccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcc
Q psy16199 342 HIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGS 421 (842)
Q Consensus 342 ~i~~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 421 (842)
.-+|.+|+++++|++|+||+++||++.+.+.+.++.....|||++++||++.+|.. +|++||+.+. ..+
T Consensus 32 ~~~m~~L~~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~-gnp~PR~~~~----------~~~ 100 (345)
T 3oix_A 32 RGSMVSTHTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERA-GNPQPRYADT----------KLG 100 (345)
T ss_dssp ----CCCCEEETTEEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBC-CSCSCCEEEC----------SSE
T ss_pred ccccCCcCeEECCEECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCC-CCCCCcEEec----------ccc
Confidence 34567899999999999999999999999999999999999999999999998875 8999999864 257
Q ss_pred eeeeEeecccchhhHH
Q psy16199 422 FLNIELISEKTAFIFF 437 (842)
Q Consensus 422 ~~n~e~~s~~~~~~~~ 437 (842)
++|..-++...++.|+
T Consensus 101 ~iN~~G~~n~G~~~~~ 116 (345)
T 3oix_A 101 SINSMGLPNLGINYYL 116 (345)
T ss_dssp EEECCCCCBSCHHHHH
T ss_pred hhccCCCCChhHHHHH
Confidence 8999555555555555
No 156
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.16 E-value=3.8e-10 Score=123.06 Aligned_cols=138 Identities=18% Similarity=0.149 Sum_probs=105.5
Q ss_pred cceEEEeccCC--CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC
Q psy16199 564 SILIASIMCTY--NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~--~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p 641 (842)
.|+.++++... ...++.+.++.+.++|+|+|.+|+++| .++++++++. ++|+++++..
T Consensus 68 ~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~p-------------------~~~~~~l~~~-gi~vi~~v~t 127 (328)
T 2gjl_A 68 RPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDP-------------------GEHIAEFRRH-GVKVIHKCTA 127 (328)
T ss_dssp SCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESCC-------------------HHHHHHHHHT-TCEEEEEESS
T ss_pred CCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCCc-------------------HHHHHHHHHc-CCCEEeeCCC
Confidence 57777776420 034567777777788999999998765 1456677765 7899987642
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
.+.++.+.+.|+|+|++.+. ..||++|.. .+..++++.++++.+ ++|||+
T Consensus 128 -----~~~a~~~~~~GaD~i~v~g~-----------------------~~GG~~G~~-~~~~~~~l~~v~~~~-~iPvia 177 (328)
T 2gjl_A 128 -----VRHALKAERLGVDAVSIDGF-----------------------ECAGHPGED-DIPGLVLLPAAANRL-RVPIIA 177 (328)
T ss_dssp -----HHHHHHHHHTTCSEEEEECT-----------------------TCSBCCCSS-CCCHHHHHHHHHTTC-CSCEEE
T ss_pred -----HHHHHHHHHcCCCEEEEECC-----------------------CCCcCCCCc-cccHHHHHHHHHHhc-CCCEEE
Confidence 34577889999999998543 124454432 235688999999887 799999
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
.|||.+++|+.+++++||++|+|+|+++..
T Consensus 178 aGGI~~~~~v~~al~~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 178 SGGFADGRGLVAALALGADAINMGTRFLAT 207 (328)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEESHHHHTS
T ss_pred ECCCCCHHHHHHHHHcCCCEEEECHHHHcC
Confidence 999999999999999999999999999954
No 157
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.13 E-value=4.9e-10 Score=123.60 Aligned_cols=261 Identities=18% Similarity=0.195 Sum_probs=147.5
Q ss_pred ccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcceeee
Q psy16199 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNI 425 (842)
Q Consensus 346 ~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~n~ 425 (842)
..++++++|++|+||+++||++ ..+++++....+.|||++++||+++.|.. +|++||+.+..+ ..+++|.
T Consensus 82 ~~l~v~~~Gl~f~NPvglAAG~-dk~~~~~~~l~~lGfG~vevgtvT~~pq~-GNp~PRlfrl~e--------~~aiiN~ 151 (415)
T 3i65_A 82 IYACTNIKHLDFINPFGVAAGF-DKNGVCIDSILKLGFSFIEIGTITPRGQT-GNAKPRIFRDVE--------SRSIINS 151 (415)
T ss_dssp GGGCEEETTEEESSSEEECTTS-STTCSSHHHHHTTTCSEEEEEEECSSCBC-CSCSCCEEEEGG--------GTEEEEC
T ss_pred ccccEEECCEECCCCCEECCCC-CCCHHHHHHHHHcCCCeEEeCcccCCcCC-CCCCCeEEeccC--------CCceeec
Confidence 4478999999999999999998 56778899999999999999999999876 899999987522 3478999
Q ss_pred EeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhc---ccc-ccCCcccccCCCCCCCCCChhHHHHhhhhhhCccccc
Q psy16199 426 ELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN---LKK-LNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQR 501 (842)
Q Consensus 426 e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~g~~~g~dk~~~~~~~~~~~~l~~~~G~~~g~ 501 (842)
++++|+|- ....+++.+..+ ... ....|+|++=|-.|.+-+...+-...+..+-..
T Consensus 152 ---------------~GfnN~G~-d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~---- 211 (415)
T 3i65_A 152 ---------------CGFNNMGC-DKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRY---- 211 (415)
T ss_dssp ---------------CCSCBCCH-HHHHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGG----
T ss_pred ---------------CCCCchhH-HHHHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhh----
Confidence 77777761 112222222111 000 023567766444443111112222222221000
Q ss_pred cccCccCCCcceeEeeccCCccccCCccccCCCcc-chhhhhcCccccccccccccccc------------------ccc
Q psy16199 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDS-GYQAITFHPETHQAHVTDECTGC------------------TLC 562 (842)
Q Consensus 502 vt~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~-G~dai~~~~~~~~~~~~~~~~~~------------------~~~ 562 (842)
.|---|| ++|.|. |...... ++... ..-+..+.. ...
T Consensus 212 -----------------ad~ieiN-----iScPNt~Gl~~lq~-~~~l~-~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~ 267 (415)
T 3i65_A 212 -----------------ADYIAIN-----VSSPNTPGLRDNQE-AGKLK-NIILSVKEEIDNLEKNNIMNDEFLWFNTTK 267 (415)
T ss_dssp -----------------CSEEEEE-----CCCCC--------C-CHHHH-HHHHHHHHHHHHHHHHCCSCHHHHCCSSSS
T ss_pred -----------------CCEEEEE-----CCCCCCCCcccccC-HHHHH-HHHHHHHHHHHhhcccccccccccccccCC
Confidence 0111133 244432 2110000 00000 000000000 002
Q ss_pred ccc-eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCC----CCCCcccCC-CCHHHHHHHHHHHHhhC--Ccc
Q psy16199 563 LSI-LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMG----ERGMGLACG-QDPEMVRNISLWVRSSV--KIP 634 (842)
Q Consensus 563 ~~p-vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~----~~~~G~~~~-~~~~~~~~ii~~v~~~~--~~P 634 (842)
+.| |++=|..+.+.+++.++++.++++|+|+|.+.=....... ....|.--+ .......+++..+++.+ ++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 478 8998866566778999999999999999988521110000 001111111 12345668888888888 799
Q ss_pred EEEEecCChhcHHHHHHHHHHCCCCEEEE
Q psy16199 635 FFVKLTPNITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 635 v~vKl~p~~~~~~~~a~~~~~~G~d~i~v 663 (842)
|+. ..++.+..+..+.+. +|||+|-+
T Consensus 348 IIg--~GGI~s~eDa~e~l~-aGAd~VqI 373 (415)
T 3i65_A 348 IIA--SGGIFSGLDALEKIE-AGASVCQL 373 (415)
T ss_dssp EEE--CSSCCSHHHHHHHHH-HTEEEEEE
T ss_pred EEE--ECCCCCHHHHHHHHH-cCCCEEEE
Confidence 875 444556666666655 89999988
No 158
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.13 E-value=2.5e-10 Score=123.06 Aligned_cols=200 Identities=21% Similarity=0.230 Sum_probs=123.6
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEE-EEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADAL-ELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~i-elN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
.++|.+. ++ .++++.++++|+|+| ++| -+|... ....|.....+++.+.++ ++.+++||++|+...
T Consensus 22 ~g~i~~~----~~---~~~a~~~~~~Ga~~I~~l~-p~~~~~-~~~~G~~~~~~~~~i~~I----~~~~~iPv~~k~r~g 88 (305)
T 2nv1_A 22 GGVIMDV----IN---AEQAKIAEEAGAVAVMALE-RVPADI-RAAGGVARMADPTIVEEV----MNAVSIPVMAKARIG 88 (305)
T ss_dssp TCEEEEE----SS---HHHHHHHHHTTCSEEEECC-C--------CCCCCCCCCHHHHHHH----HHHCSSCEEEEECTT
T ss_pred CCeeecC----CH---HHHHHHHHHcCCCEEEEcC-CCcchh-hhccCcccCCCHHHHHHH----HHhCCCCEEeccccc
Confidence 4567654 23 356667777899999 555 233222 223344556677666554 556789999999764
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCC-CC--CCCCCcc-cCCC--------------ccccC------------
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLS-AD--GNPWPAV-GTKK--------------LTTYG------------ 692 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~-~~--~~~~p~~-~~~~--------------~~~~g------------ 692 (842)
. .+.++.+.+.|+|+|+.+..+....... ++ ..+.+.+ +.+. -...|
T Consensus 89 ~---~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~ 165 (305)
T 2nv1_A 89 H---IVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVR 165 (305)
T ss_dssp C---HHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHH
T ss_pred c---hHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHh
Confidence 3 3456777889999997432221100000 00 0000000 0000 00000
Q ss_pred -------------CCCCCcc------ccchHHHHHHHHhhCCCCcEE--EecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 693 -------------GVSGNAT------RPMGLKAVSSIAKMFPNFPIL--GIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 693 -------------G~sG~~~------~p~al~~v~~i~~~~~~ipIi--~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
|+++... .+..+++++++++.. ++||+ ++|||.|++|+.+++.+||++|+|+|+++..
T Consensus 166 h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~-~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~ 244 (305)
T 2nv1_A 166 HMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG-KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS 244 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT-SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS
T ss_pred hhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc-CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC
Confidence 1111111 345688899998886 79998 9999999999999999999999999999964
Q ss_pred -Cc-hhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 752 -DF-TVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 752 -gp-~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
+| ..++++.+.+..|+..+++ +++++.|.
T Consensus 245 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~g~ 276 (305)
T 2nv1_A 245 DNPAKFAKAIVEATTHFTDYKLIAELSKELGT 276 (305)
T ss_dssp SCHHHHHHHHHHHHHTTTCHHHHHHHTSCC--
T ss_pred CCHHHHHHHHHHHHHHhcChhhHHHHHHHhhh
Confidence 35 5788999999988888777 77777654
No 159
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.11 E-value=3.7e-10 Score=126.02 Aligned_cols=164 Identities=13% Similarity=0.131 Sum_probs=113.9
Q ss_pred HhHHHHHHHHHhhcCcCEEEEec---------cCCCCCCC-CCCcccCCCCHHHHHHHHHHHHhhCC-ccEEEEecCCh-
Q psy16199 576 KDDWLELSKKTEKAGADALELNL---------SCPHGMGE-RGMGLACGQDPEMVRNISLWVRSSVK-IPFFVKLTPNI- 643 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~---------scP~~~~~-~~~G~~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~p~~- 643 (842)
.++|.++|+++.+||+|+||||. -+|.+..+ ..||.++..+.+++.|++++||+++. -||.+|+++.-
T Consensus 171 i~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~ 250 (400)
T 4gbu_A 171 IKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGV 250 (400)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccc
Confidence 57899999999999999999984 48955444 45999998899999999999999873 49999998631
Q ss_pred -------------hcHHHHHHHHHHCC-----CCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHH
Q psy16199 644 -------------TNITDIAKAAYEGK-----ADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLK 705 (842)
Q Consensus 644 -------------~~~~~~a~~~~~~G-----~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~ 705 (842)
.+..+++..+...+ .+.+.++..-.. .|.. ....+.+.... .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~----~~~~~~~~~~~-----~- 310 (400)
T 4gbu_A 251 FNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVT----------NPFL----TEGEGEYEGGS-----N- 310 (400)
T ss_dssp TTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCS----------STTS----CTTTTCCCSCC-----S-
T ss_pred cCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCC----------Cccc----ccccchhhhHH-----H-
Confidence 12334555555433 334444321110 0000 00112222211 1
Q ss_pred HHHHHHhhCCCCcEEEecCcCCHHHHHHHHH-hCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 706 AVSSIAKMFPNFPILGIGGIDSADVALQFIQ-AGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 706 ~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~-~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
..+++.+ ++|||++|||.+..++.+.+. -+||+|.++|+++. +|.++++++++.
T Consensus 311 --~~ir~~~-~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia-dPdl~~k~~~G~ 365 (400)
T 4gbu_A 311 --DFVYSIW-KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS-NPDLVDRLEKGL 365 (400)
T ss_dssp --THHHHHC-CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH-CTTHHHHHHHTC
T ss_pred --HHHHHHh-CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH-CcHHHHHHHcCC
Confidence 2355666 799999999998888877776 46999999999995 599999998774
No 160
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.10 E-value=4.8e-10 Score=118.20 Aligned_cols=185 Identities=19% Similarity=0.162 Sum_probs=119.6
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCC-------cccCCCCHHHHHHHHHHHHhhCCccE
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNLSCPHGMGERGM-------GLACGQDPEMVRNISLWVRSSVKIPF 635 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~-------G~~~~~~~~~~~~ii~~v~~~~~~Pv 635 (842)
+.++.++.++. +.+++.+.++.++++|+|+||+++.+..-+..+.. ...-+.+++...++++.+++.+++||
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv 97 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPV 97 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCE
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCE
Confidence 56788887653 35899999999999999999999755311100000 00002477888899999999999999
Q ss_pred EEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccc----------c------CCCCCC--CCCcccC--C---CccccC
Q psy16199 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLM----------S------LSADGN--PWPAVGT--K---KLTTYG 692 (842)
Q Consensus 636 ~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~----------~------~~~~~~--~~p~~~~--~---~~~~~g 692 (842)
++....+... ....+.+.++|+|+|++.+...... + +...+. ....+.. . ......
T Consensus 98 ~~m~~~~~~~-~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~ 176 (262)
T 1rd5_A 98 VLLSYYKPIM-FRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVN 176 (262)
T ss_dssp EEECCSHHHH-SCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSS
T ss_pred EEEecCcHHH-HHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCC
Confidence 8854232110 0112337889999998865321000 0 000000 0000000 0 000134
Q ss_pred CCCCC--ccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 693 GVSGN--ATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 693 G~sG~--~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
|++|. ...+..+++++++++.. ++||++.|||.|++++.+++.+||++|.|||+++.
T Consensus 177 G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 177 GVTGPRANVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp CCBCTTSCBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCCCCCcCCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 55565 44466778999999987 79999999999999999999999999999999984
No 161
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.09 E-value=3.2e-10 Score=121.83 Aligned_cols=201 Identities=17% Similarity=0.145 Sum_probs=128.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+|+++.. .++++.+.++|+++|+++.+.|...... .|......++ .++.+++.+++|++++.....
T Consensus 22 ~~~i~~~~~-------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~-~G~~~~~~~~----~i~~i~~~~~~Pvi~~~~~~~ 89 (297)
T 2zbt_A 22 GGVIMDVTT-------PEQAVIAEEAGAVAVMALERVPADIRAQ-GGVARMSDPK----IIKEIMAAVSIPVMAKVRIGH 89 (297)
T ss_dssp TEEEEEESS-------HHHHHHHHHHTCSEEEECSSCHHHHHHT-TCCCCCCCHH----HHHHHHTTCSSCEEEEEETTC
T ss_pred CCeeeeech-------HHHHHHHHHCCCcEEEeccccchHHHhh-cCCccCCCHH----HHHHHHHhcCCCeEEEeccCC
Confidence 689998842 5677777788999999976555211101 1323345554 455677788999999887653
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCC-CCCC--CCCcc-cCCC--------------cccc--------------
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLS-ADGN--PWPAV-GTKK--------------LTTY-------------- 691 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~-~~~~--~~p~~-~~~~--------------~~~~-------------- 691 (842)
.+.++.+.++|+|+|..+........+. +... ..+.+ +.+. -...
T Consensus 90 ---~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~ 166 (297)
T 2zbt_A 90 ---FVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRH 166 (297)
T ss_dssp ---HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHH
T ss_pred ---HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhh
Confidence 5678888999999995543211000000 0000 01111 0000 0000
Q ss_pred -----------CCCCCCc------cccchHHHHHHHHhhCCCCcEE--EecCcCCHHHHHHHHHhCCCEEEEehhhhcc-
Q psy16199 692 -----------GGVSGNA------TRPMGLKAVSSIAKMFPNFPIL--GIGGIDSADVALQFIQAGAHAVQICSAVQNQ- 751 (842)
Q Consensus 692 -----------gG~sG~~------~~p~al~~v~~i~~~~~~ipIi--~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~- 751 (842)
+|+.+.. ..+..++.++++++.. ++|++ +.|||.+++|+.+++.+||++|++||+++..
T Consensus 167 ~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~ 245 (297)
T 2zbt_A 167 ARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSG 245 (297)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSS
T ss_pred HHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCC
Confidence 1121111 1345678899998887 78988 9999999999999999999999999999954
Q ss_pred Cc-hhHHHHHHHHHHHHHhcCC-CccccCCC
Q psy16199 752 DF-TVVDDYITGLQTLLYLKST-QLKGWDGQ 780 (842)
Q Consensus 752 gp-~~~~~i~~~l~~~m~~~g~-~i~~~~~~ 780 (842)
+| ..++++++.++.++...++ +++++.|.
T Consensus 246 dp~~~~~~l~~~i~~~~~~~~~~~~~~~~g~ 276 (297)
T 2zbt_A 246 DPRKRARAIVRAVAHYNDPEVLAEVSEDLGE 276 (297)
T ss_dssp CHHHHHHHHHHHHHTTTCHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHhchHhhhHHHHhcCc
Confidence 34 5677787888777777766 67776665
No 162
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.06 E-value=3.5e-09 Score=122.31 Aligned_cols=243 Identities=12% Similarity=0.165 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHhcCcEEEeceeecc---------------ccceeccc-----cccCCCEEEEccCCCCCCCCCCCCCCc
Q psy16199 52 DAVNFEVELVKDLGVKIECERSLST---------------RDITIEKL-----RKDGYTAIFIGIGKPNANVIPIFQGLT 111 (842)
Q Consensus 52 ~~v~~~~~~l~~~gV~i~~~~~v~~---------------~~v~~~~~-----~~~~yd~lVlAtGs~~~~~~~i~~G~~ 111 (842)
++.+|....+++++..+++++.|.. ..|+..++ ....++.||+|||.. |..++.+ .
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~-P~iP~~~---~ 221 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT-AKMPSGL---P 221 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE-ECCCTTS---C
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC-CCCCCCC---C
Confidence 6777777777788877888887642 01222221 124589999999976 6655443 2
Q ss_pred cccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCc-EEEEcCChhHHHHHHHHHHc-CCcEEEEEEeecCccccCC-
Q psy16199 112 EEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDCATSALRC-GANKVLVVFRKGCTNIRAV- 188 (842)
Q Consensus 112 ~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~k-VvVIGgG~~g~e~A~~l~~~-G~~~Vtlv~r~~~~~~~~~- 188 (842)
....++++.+|........ .....+| |+|||+|.||+|++.+|++. ...+|+++.|++. ..|..
T Consensus 222 ~~g~v~Hss~y~~~~~~~~------------~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~-~~p~~~ 288 (501)
T 4b63_A 222 QDPRIIHSSKYCTTLPALL------------KDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA-MRPSDD 288 (501)
T ss_dssp CCTTEEEGGGHHHHHHHHS------------CCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS-CCBCCC
T ss_pred CCcceeeccccccchhhcc------------ccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc-cccccc
Confidence 3356888888887654321 1234455 99999999999999999875 2346999999862 11110
Q ss_pred ---------H-----------HHHHH------------------------HHhc----------CcEEecCCCceEEEc-
Q psy16199 189 ---------P-----------EEVQL------------------------AWEE----------KCEFLPFMSPVQVDV- 213 (842)
Q Consensus 189 ---------~-----------~~~~~------------------------~~~~----------gV~i~~~~~v~~v~~- 213 (842)
+ ..... +.++ ...+..+..+..+..
T Consensus 289 s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~ 368 (501)
T 4b63_A 289 SPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHH 368 (501)
T ss_dssp CTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECC
T ss_pred cccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeec
Confidence 0 00000 0000 123444444444432
Q ss_pred -cCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhh-cCCcccCCCCCeeeCCCCC-C-----
Q psy16199 214 -KDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEA-IKPVKLDKYGYPEVNYTTM-A----- 285 (842)
Q Consensus 214 -~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~-l~gl~~~~~G~i~vd~~~~-~----- 285 (842)
..+++. +.........+|. ..+...++++|.||+|||+++....++.. +..+..+.+|.+.|+.++. .
T Consensus 369 ~~~~~~~-v~~~~~~~~~~~v---~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~ 444 (501)
T 4b63_A 369 GPQSRMR-IHLKSSKPESEGA---ANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSK 444 (501)
T ss_dssp SSSSCEE-EEEEESCC-----------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTT
T ss_pred CCCCeEE-EEeeeeEEeCCee---EeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCc
Confidence 122332 3333222222221 11222478999999999999544444332 2235567778888774432 1
Q ss_pred -CCCCCeEEeccCC-----CCchhHHHHHHHHHHHH
Q psy16199 286 -TSVPGVFCGGDTA-----NLSDTTVESVNDGKTAA 315 (842)
Q Consensus 286 -Ts~~gVfa~GD~~-----~~~~~~~~A~~~G~~aA 315 (842)
...++||+-|-+. +.+.+...|...|+++.
T Consensus 445 ~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~~ 480 (501)
T 4b63_A 445 VSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQ 480 (501)
T ss_dssp BCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHHH
T ss_pred cCCCceEEecCCCcccCCcchhhHHHHHHHHHHHHH
Confidence 1346799998542 11233345666665443
No 163
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.05 E-value=3.8e-09 Score=115.58 Aligned_cols=133 Identities=22% Similarity=0.205 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHHC
Q psy16199 578 DWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYEG 656 (842)
Q Consensus 578 ~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~~ 656 (842)
++.+.++.+.++|+|.|+||.+ + .+++.+.+.++++++.. ++||++.-..+ .+.|+.+.++
T Consensus 108 ~~~~~~~~lieaGvd~I~idta--~------------G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t----~e~A~~a~~a 169 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSS--H------------GHSEGVLQRIRETRAAYPHLEIIGGNVAT----AEGARALIEA 169 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECS--C------------TTSHHHHHHHHHHHHHCTTCEEEEEEECS----HHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCEEEEeCC--C------------CCCHHHHHHHHHHHHhcCCCceEeeeeCC----HHHHHHHHHc
Confidence 4556677777789999999842 2 12456778899999887 78998864333 3558889999
Q ss_pred CCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh---hCCCCcEEEecCcCCHHHHHH
Q psy16199 657 KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK---MFPNFPILGIGGIDSADVALQ 733 (842)
Q Consensus 657 G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~---~~~~ipIi~~GGI~t~~da~~ 733 (842)
|+|+|.+...-++. . ..+...+ .|.+ .+..+.++++ .. ++|||+.|||.++.|+.+
T Consensus 170 GAD~I~vG~gpGs~------------~--~tr~~~g--~g~p----~~~~l~~v~~~~~~~-~iPVIA~GGI~~~~di~k 228 (366)
T 4fo4_A 170 GVSAVKVGIGPGSI------------C--TTRIVTG--VGVP----QITAIADAAGVANEY-GIPVIADGGIRFSGDISK 228 (366)
T ss_dssp TCSEEEECSSCSTT------------B--CHHHHHC--CCCC----HHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHH
T ss_pred CCCEEEEecCCCCC------------C--CcccccC--cccc----hHHHHHHHHHHHhhc-CCeEEEeCCCCCHHHHHH
Confidence 99999992110000 0 0000000 1111 2445555544 44 699999999999999999
Q ss_pred HHHhCCCEEEEehhhh
Q psy16199 734 FIQAGAHAVQICSAVQ 749 (842)
Q Consensus 734 ~l~~GA~~Vqv~ta~l 749 (842)
++++||++|||+|+|+
T Consensus 229 ala~GAd~V~vGs~f~ 244 (366)
T 4fo4_A 229 AIAAGASCVMVGSMFA 244 (366)
T ss_dssp HHHTTCSEEEESTTTT
T ss_pred HHHcCCCEEEEChHhh
Confidence 9999999999999998
No 164
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.03 E-value=6.9e-10 Score=113.34 Aligned_cols=184 Identities=20% Similarity=0.232 Sum_probs=119.9
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT 644 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~ 644 (842)
-+|-.+. ++ +.|+.++++||.+|-...+||......| |.+=+++|+.+ ++|++.+++||+.|..-.
T Consensus 13 ~vimdv~---~~----eqa~iae~aGa~av~~l~~~p~d~r~~g-Gv~Rm~dp~~I----~~I~~aVsIPVm~k~rig-- 78 (291)
T 3o07_A 13 GVIMDVV---TP----EQAKIAEKSGACAVMALESIPADMRKSG-KVCRMSDPKMI----KDIMNSVSIPVMAKVRIG-- 78 (291)
T ss_dssp CEEEEES---SH----HHHHHHHHHTCSEEEECSSCHHHHHTTT-CCCCCCCHHHH----HHHHTTCSSCEEEEEETT--
T ss_pred CeeeecC---CH----HHHHHHHHhCchhhhhccCCCchhhhcC-CccccCCHHHH----HHHHHhCCCCeEEEEecC--
Confidence 4666662 33 4566778889999999999995444343 55556788665 556778899999999753
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccC-CCCC--CCCCcc-cCCCcc--------------cc---------------
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSL-SADG--NPWPAV-GTKKLT--------------TY--------------- 691 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~-~~~~--~~~p~~-~~~~~~--------------~~--------------- 691 (842)
++ .=|+.+++.|+|.|..+..+.....+ .++. ...|.+ +-.... ..
T Consensus 79 h~-~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~ 157 (291)
T 3o07_A 79 HF-VEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHI 157 (291)
T ss_dssp CH-HHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHH
T ss_pred cH-HHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHH
Confidence 23 33789999999999998643322111 1111 122433 110000 00
Q ss_pred ----------CCC-CCCc------cccchHHHHHHHHhhCCCCcE--EEecCcCCHHHHHHHHHhCCCEEEEehhhhccC
Q psy16199 692 ----------GGV-SGNA------TRPMGLKAVSSIAKMFPNFPI--LGIGGIDSADVALQFIQAGAHAVQICSAVQNQD 752 (842)
Q Consensus 692 ----------gG~-sG~~------~~p~al~~v~~i~~~~~~ipI--i~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~g 752 (842)
.|| +..- .....+++++++++.. ++|| |++|||.|++|+.+++.+||++|+|+|+++..+
T Consensus 158 r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~-~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~ 236 (291)
T 3o07_A 158 RRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG-KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSS 236 (291)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT-SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSS
T ss_pred HHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc-CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCC
Confidence 012 1100 0134588999999986 7898 569999999999999999999999999999533
Q ss_pred -ch-hHHHHHHHHH
Q psy16199 753 -FT-VVDDYITGLQ 764 (842)
Q Consensus 753 -p~-~~~~i~~~l~ 764 (842)
|. ..+.+.+.+.
T Consensus 237 DP~~~Akafv~Av~ 250 (291)
T 3o07_A 237 NPVRLATAVVEATT 250 (291)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 43 3444554444
No 165
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.01 E-value=3.1e-09 Score=117.23 Aligned_cols=132 Identities=20% Similarity=0.219 Sum_probs=93.0
Q ss_pred HHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCC
Q psy16199 580 LELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKAD 659 (842)
Q Consensus 580 ~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d 659 (842)
.+.++.+.++|+|.|.++.+. .+++.+.++++++++..++||+++...+ .+.|+.+.++|+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~--------------G~~~~~~e~I~~ik~~~~i~Vi~g~V~t----~e~A~~a~~aGAD 207 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH--------------GHSLNIIRTLKEIKSKMNIDVIVGNVVT----EEATKELIENGAD 207 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC--------------CSBHHHHHHHHHHHTTCCCEEEEEEECS----HHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEeCCC--------------CCcccHHHHHHHHHhcCCCeEEEeecCC----HHHHHHHHHcCCC
Confidence 456666777899999997431 1346778899999998899999975443 4568899999999
Q ss_pred EEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC--CCCcEEEecCcCCHHHHHHHHHh
Q psy16199 660 GVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF--PNFPILGIGGIDSADVALQFIQA 737 (842)
Q Consensus 660 ~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~--~~ipIi~~GGI~t~~da~~~l~~ 737 (842)
+|++.++-++ + ..+ +. ..+ .|.+ .+..+.++++.. .++|||+.|||.+++|+.+++++
T Consensus 208 ~I~vG~g~Gs---~--~~t---------r~-~~g-~g~p----~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal 267 (400)
T 3ffs_A 208 GIKVGIGPGS---I--CTT---------RI-VAG-VGVP----QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV 267 (400)
T ss_dssp EEEECC-----------------------C-CSC-BCCC----HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT
T ss_pred EEEEeCCCCc---C--ccc---------cc-ccc-cchh----HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc
Confidence 9999443111 0 000 00 001 1111 245556665432 26999999999999999999999
Q ss_pred CCCEEEEehhhh
Q psy16199 738 GAHAVQICSAVQ 749 (842)
Q Consensus 738 GA~~Vqv~ta~l 749 (842)
||++|||||+|+
T Consensus 268 GAd~V~vGt~f~ 279 (400)
T 3ffs_A 268 GASSVMIGSILA 279 (400)
T ss_dssp TCSEEEECGGGT
T ss_pred CCCEEEEChHHh
Confidence 999999999998
No 166
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.00 E-value=9.6e-09 Score=108.45 Aligned_cols=181 Identities=19% Similarity=0.170 Sum_probs=119.1
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEec--cCCCCCCCCCCcccC----------CCCHHHHHHHHHHHHhh
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNL--SCPHGMGERGMGLAC----------GQDPEMVRNISLWVRSS 630 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~--scP~~~~~~~~G~~~----------~~~~~~~~~ii~~v~~~ 630 (842)
+.+|.+|.+|. +.+.+.+.++.++++|+|+||+++ |.|.. . |..+ |-+.+...++++++++.
T Consensus 17 ~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~---D--G~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 17 GAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLA---D--GPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT---C--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccC---C--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 56788887764 358999999999999999999986 23321 0 1000 12345566899999999
Q ss_pred -CCccEEE--EecCCh-hcHHHHHHHHHHCCCCEEEEecCCCccc----------cCC----CC-CCCCCccc-----CC
Q psy16199 631 -VKIPFFV--KLTPNI-TNITDIAKAAYEGKADGVSAINTVSGLM----------SLS----AD-GNPWPAVG-----TK 686 (842)
Q Consensus 631 -~~~Pv~v--Kl~p~~-~~~~~~a~~~~~~G~d~i~v~nt~~~~~----------~~~----~~-~~~~p~~~-----~~ 686 (842)
+++||++ +..|-+ ....++++.+.++|+|+|++..-..... +++ +. .+....+. ..
T Consensus 92 ~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~ 171 (268)
T 1qop_A 92 HPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGR 171 (268)
T ss_dssp CSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred CCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCC
Confidence 8999877 233211 1457889999999999999853221100 000 00 00000000 00
Q ss_pred ---CccccCCCCCC--ccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 687 ---KLTTYGGVSGN--ATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 687 ---~~~~~gG~sG~--~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
..-..-|++|. ...+...++++++++.. ++||+..|||+|++++.+++.+|||+|.+||+++.
T Consensus 172 g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 172 GYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp SCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CcEEEEecCCcCCCccCCCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 00011245554 33355689999999987 79999999999999999999999999999999984
No 167
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.99 E-value=7.3e-09 Score=114.67 Aligned_cols=128 Identities=20% Similarity=0.273 Sum_probs=96.6
Q ss_pred HHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCC
Q psy16199 579 WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKA 658 (842)
Q Consensus 579 ~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~ 658 (842)
+.+.++.+.+.|+|.|.++++||. .++++++++ .++||++++.. .+.++.+++.|+
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~~------------------~~~i~~~~~-~g~~v~~~v~t-----~~~a~~a~~~Ga 166 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVPD------------------REVIARLRR-AGTLTLVTATT-----PEEARAVEAAGA 166 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCCC------------------HHHHHHHHH-TTCEEEEEESS-----HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCc------------------HHHHHHHHH-CCCeEEEECCC-----HHHHHHHHHcCC
Confidence 566677777789999999998873 145666665 47899998742 234788999999
Q ss_pred CEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCc-------cccch-HHHHHHHHhhCCCCcEEEecCcCCHHH
Q psy16199 659 DGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNA-------TRPMG-LKAVSSIAKMFPNFPILGIGGIDSADV 730 (842)
Q Consensus 659 d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~-------~~p~a-l~~v~~i~~~~~~ipIi~~GGI~t~~d 730 (842)
|+|++.+... ||+.|.. ..|.. +.++.++++.+ ++|||+.|||.++++
T Consensus 167 D~i~v~g~~~-----------------------GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaaGGI~~~~~ 222 (369)
T 3bw2_A 167 DAVIAQGVEA-----------------------GGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVAAGGIMRGGQ 222 (369)
T ss_dssp SEEEEECTTC-----------------------SEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEESSCCSHHH
T ss_pred CEEEEeCCCc-----------------------CCcCCCcccccccccccccHHHHHHHHHHhc-CceEEEECCCCCHHH
Confidence 9999966421 2222211 01123 88899998887 799999999999999
Q ss_pred HHHHHHhCCCEEEEehhhhccCchh
Q psy16199 731 ALQFIQAGAHAVQICSAVQNQDFTV 755 (842)
Q Consensus 731 a~~~l~~GA~~Vqv~ta~l~~gp~~ 755 (842)
+.+++++||++|+|+|+++.. ++.
T Consensus 223 ~~~~l~~GAd~V~vGs~~~~~-~e~ 246 (369)
T 3bw2_A 223 IAAVLAAGADAAQLGTAFLAT-DES 246 (369)
T ss_dssp HHHHHHTTCSEEEESHHHHTS-TTC
T ss_pred HHHHHHcCCCEEEEChHHhCC-ccc
Confidence 999999999999999999954 443
No 168
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.98 E-value=2.4e-09 Score=111.56 Aligned_cols=152 Identities=11% Similarity=0.128 Sum_probs=108.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccE--------
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF-------- 635 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv-------- 635 (842)
.|+++.-+. .++++ ++.+.++|||.|.++.. ...+|+.+.++++.+....-+.+
T Consensus 75 ipv~v~ggi-~~~~~----~~~~l~~Gad~V~lg~~-------------~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~ 136 (244)
T 2y88_A 75 VQVELSGGI-RDDES----LAAALATGCARVNVGTA-------------ALENPQWCARVIGEHGDQVAVGLDVQIIDGE 136 (244)
T ss_dssp SEEEEESSC-CSHHH----HHHHHHTTCSEEEECHH-------------HHHCHHHHHHHHHHHGGGEEEEEEEEEETTE
T ss_pred CcEEEECCC-CCHHH----HHHHHHcCCCEEEECch-------------HhhChHHHHHHHHHcCCCEEEEEeccccCCC
Confidence 688887653 35555 33334469999998532 23567888888887654322222
Q ss_pred -EEEecCChh----cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHH
Q psy16199 636 -FVKLTPNIT----NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSI 710 (842)
Q Consensus 636 -~vKl~p~~~----~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i 710 (842)
.||+. +.. +..+.++.+++.|++.|.++++.. -|.++|. .++.++++
T Consensus 137 ~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~----------------------~~~~~g~-----~~~~~~~l 188 (244)
T 2y88_A 137 HRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITK----------------------DGTLGGP-----NLDLLAGV 188 (244)
T ss_dssp EEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTT----------------------TTTTSCC-----CHHHHHHH
T ss_pred CEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCC----------------------ccccCCC-----CHHHHHHH
Confidence 34444 221 568889999999999999976422 1223332 27888899
Q ss_pred HhhCCCCcEEEecCcCCHHHHHHHHHh---CCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 711 AKMFPNFPILGIGGIDSADVALQFIQA---GAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 711 ~~~~~~ipIi~~GGI~t~~da~~~l~~---GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
++.+ ++|||++|||.+++|+.+++++ ||++|+++|+++ .+|+.+.++++.+
T Consensus 189 ~~~~-~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~-~~~~~~~~~~~~~ 242 (244)
T 2y88_A 189 ADRT-DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALY-ARRFTLPQALAAV 242 (244)
T ss_dssp HTTC-SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHH-TTSSCHHHHHHHT
T ss_pred HHhC-CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHH-CCCcCHHHHHHHh
Confidence 8887 7999999999999999999998 999999999999 4688887776654
No 169
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.96 E-value=3.5e-08 Score=103.71 Aligned_cols=157 Identities=12% Similarity=0.085 Sum_probs=97.8
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhc-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
+++.+...-++.++....++.+.++ +++.|++++- |... ...+...++++.+++.. ++.++.-..+
T Consensus 67 ~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~-~d~~----------~~~~e~~~~~~~a~~~~~~g~~vi~~~~~ 135 (264)
T 1xm3_A 67 TLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVI-GCSR----------SLLPDPVETLKASEQLLEEGFIVLPYTSD 135 (264)
T ss_dssp EEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCB-CCTT----------TCCBCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred eEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeec-CCCc----------ccccchHHHHHHHHHHHCCCeEEEEEcCC
Confidence 3444553336788877777777766 5788888762 1110 00122345555555542 4555544555
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
+. +.++.+.+.|+|.|.......+. .. +.++ .+.++++++.. ++||++
T Consensus 136 ~~----~~a~~~~~~gad~v~~~~~~~Gt-------------------~~-~~~~-------~~~l~~i~~~~-~iPviv 183 (264)
T 1xm3_A 136 DV----VLARKLEELGVHAIMPGASPIGS-------------------GQ-GILN-------PLNLSFIIEQA-KVPVIV 183 (264)
T ss_dssp CH----HHHHHHHHHTCSCBEECSSSTTC-------------------CC-CCSC-------HHHHHHHHHHC-SSCBEE
T ss_pred CH----HHHHHHHHhCCCEEEECCcccCC-------------------CC-CCCC-------HHHHHHHHhcC-CCCEEE
Confidence 43 35778888999998431211100 00 1221 45677777766 799999
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEehhhhccC-c-hhHHHHHHHHH
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQICSAVQNQD-F-TVVDDYITGLQ 764 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~g-p-~~~~~i~~~l~ 764 (842)
.|||.+++|+.+++++||++|.|+|+++... | ..++++.+.++
T Consensus 184 ~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~ 228 (264)
T 1xm3_A 184 DAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVE 228 (264)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999532 2 34555555443
No 170
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.95 E-value=1.6e-12 Score=141.86 Aligned_cols=235 Identities=11% Similarity=-0.072 Sum_probs=135.2
Q ss_pred cccccCceeeecceeEeecC-CCCccccccCCCCCCCHHHHHHH-HHHHHhcCcEEEeceeeccccceeccccccCCCEE
Q psy16199 15 IEMSTAKVCLSKDLPDIERP-VAALPDSSEIPQYRLPFDAVNFE-VELVKDLGVKIECERSLSTRDITIEKLRKDGYTAI 92 (842)
Q Consensus 15 ~~~~~~~~~~g~~V~l~Ek~-~~GG~~~~~iP~~~~~~~~v~~~-~~~l~~~gV~i~~~~~v~~~~v~~~~~~~~~yd~l 92 (842)
+|...++...|++|+||||. .+||++.++ .++++..+++.. ..+++++|++|..+.... .. .+.+
T Consensus 80 AA~~la~~r~G~~V~viEk~~~~GG~~~~~--~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~----------~~-~~~~ 146 (326)
T 3fpz_A 80 AAYVIAKNRPDLKVCIIESSVAPGGGSWLG--GQLFSAMVMRKPAHLFLQELEIPYEDEGDYV----------VV-KHAA 146 (326)
T ss_dssp HHHHHHHHCTTSCEEEECSSSSCCTTTTCC--STTCCCEEEETTTHHHHHHTTCCCEECSSEE----------EE-SCHH
T ss_pred HHHHHHHhCCCCeEEEEECCCCCCceEEeC--CccCCHHHHHHHHHHHHHHcCCEEEECCcce----------ec-ceeE
Confidence 44444555679999999996 899998764 344444333332 345677899887654221 11 2334
Q ss_pred EEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcccCCccCCCCCCCCCCCCCc-EEEEcCChhHHHHHHHHHHcCC
Q psy16199 93 FIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGCKKESLPILKGT-VIVLGAGDTAFDCATSALRCGA 171 (842)
Q Consensus 93 VlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~~~~~c~~c~~~~~~~~~~k-VvVIGgG~~g~e~A~~l~~~G~ 171 (842)
+++++.. ++.++++ |. ......... .|..|+. ....++ ++|+|+|+++++.|..+.+.+.
T Consensus 147 ~~~~~~~-~~~~~~~-g~-~~~~~~~~~-------------~~~~~~~---~~~~~~~v~viggg~~av~~a~~~~~~~~ 207 (326)
T 3fpz_A 147 LFISTVL-SKVLQLP-NV-KLFNATCVE-------------DLVTRPP---TEKGEVTVAGVVTNWTLVTQAHGTQCAMD 207 (326)
T ss_dssp HHHHHHH-HHHHTST-TE-EEETTEEEE-------------EEEEESS---CSSSSCEEEEEEEEEHHHHTCTTSSSCCC
T ss_pred EEEcchh-hhccccc-cc-eeecccccc-------------eeeccCC---cccCCCEEEEEccCceeeehhhhhhhccC
Confidence 4455554 5555665 42 211111111 2334444 333444 9999999999999999988876
Q ss_pred cEEEEEEeecCccccCCHHHHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEE
Q psy16199 172 NKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIIS 251 (842)
Q Consensus 172 ~~Vtlv~r~~~~~~~~~~~~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~ 251 (842)
+ ++++.+....... +.........+. ..+ .++.. ...+....+.+|.++.
T Consensus 208 ~-v~i~~~~~~~~~~--------------~~~~~~~~~~~~-~~g-------------~~~~~-~~~~~~~~~~~~~~~~ 257 (326)
T 3fpz_A 208 P-NVIELAGYKNDGT--------------RDLSQKHGVILS-TTG-------------HDGPF-GAFCAKRIVDIDQNQK 257 (326)
T ss_dssp C-EEEEESCBCTTSS--------------BCTTSCCCEEEE-CCC-------------SCSSS-CSHHHHHHHHHCTTCC
T ss_pred c-EEEEeeccccccc--------------ccceeecceEEE-Eec-------------ceeeE-eecceeEEEecCceee
Confidence 5 8888766421110 000000000011 000 00000 0011223456777788
Q ss_pred ccccCcCChhHHhhcCCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC--------CchhHHHHHHHHHHHHHHHHHHHH
Q psy16199 252 AFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN--------LSDTTVESVNDGKTAAWHIHKYIQ 323 (842)
Q Consensus 252 a~G~~~~~~~l~~~l~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~--------~~~~~~~A~~~G~~aA~~I~~~L~ 323 (842)
+.|.++....+.+ +.++++ ..++|++|||||+||++. +| +...++.+|++||..|+++|+
T Consensus 258 ~~g~~~~~~~~~e----------~~iv~~-~~~~t~vpGv~aaGDaa~~v~g~~rmGp-~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 258 LGGMKGLDMNHAE----------HDVVIH-SGAYAGVDNMYFAGMEVAELDGLNRMGP-TFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CCCCCCBCHHHHH----------HHHHHH-CEECTTSBTEEECTHHHHHHHTCCBCCS-CCHHHHHHHHHHHHHHHHHHH
T ss_pred ecceecccccccC----------CeEEEC-CCeEECCCCEEEEchHhccccCCCcCch-HHHHHHHHHHHHHHHHHHHhc
Confidence 8888743333322 345556 678999999999999853 22 344567899999999999986
No 171
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.95 E-value=1.1e-08 Score=117.89 Aligned_cols=167 Identities=17% Similarity=0.199 Sum_probs=116.5
Q ss_pred hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHH
Q psy16199 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYE 655 (842)
Q Consensus 577 e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~ 655 (842)
..+.+.++++.++|+|+|.+... . .+++.+.+.++++++.+ ++|++.+-..+ .+.++.+.+
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a-----~---------g~~~~~~~~i~~l~~~~p~~pvi~G~v~t----~~~a~~~~~ 293 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTA-----H---------GHSAGVLRKIAEIRAHFPNRTLIAGNIAT----AEGARALYD 293 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCS-----C---------TTCHHHHHHHHHHHHHCSSSCEEEEEECS----HHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCeEEEeee-----c---------CcchhHHHHHHHHHHHCCCCcEeCCCccC----HHHHHHHHH
Confidence 34556677777889999999741 0 13445678899999988 89999664433 366788899
Q ss_pred CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHH
Q psy16199 656 GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFI 735 (842)
Q Consensus 656 ~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l 735 (842)
+|+|+|.++|..++... .+ ...|+.++. ..++..+...++.. ++|||++|||+++.|+.+++
T Consensus 294 ~Gad~I~vg~g~g~~~~--------------tr-~~~~~~~p~--~~~l~~~~~~~~~~-~ipvia~GGi~~~~di~kal 355 (491)
T 1zfj_A 294 AGVDVVKVGIGPGSICT--------------TR-VVAGVGVPQ--VTAIYDAAAVAREY-GKTIIADGGIKYSGDIVKAL 355 (491)
T ss_dssp TTCSEEEECSSCCTTBC--------------HH-HHTCCCCCH--HHHHHHHHHHHHHT-TCEEEEESCCCSHHHHHHHH
T ss_pred cCCCEEEECccCCcceE--------------Ee-eecCCCCCc--HHHHHHHHHHHhhc-CCCEEeeCCCCCHHHHHHHH
Confidence 99999999653221000 00 011222221 22233333333345 79999999999999999999
Q ss_pred HhCCCEEEEehhhhc-------------------c------------------------------C-----------chh
Q psy16199 736 QAGAHAVQICSAVQN-------------------Q------------------------------D-----------FTV 755 (842)
Q Consensus 736 ~~GA~~Vqv~ta~l~-------------------~------------------------------g-----------p~~ 755 (842)
++||++|++||+++. . | ..+
T Consensus 356 ~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~ 435 (491)
T 1zfj_A 356 AAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDI 435 (491)
T ss_dssp HTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHH
T ss_pred HcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCcCcceEecCcCCCHHHH
Confidence 999999999999972 1 1 136
Q ss_pred HHHHHHHHHHHHHhcCC-CccccCC
Q psy16199 756 VDDYITGLQTLLYLKST-QLKGWDG 779 (842)
Q Consensus 756 ~~~i~~~l~~~m~~~g~-~i~~~~~ 779 (842)
+..+..+|+.-|...|+ ++.++..
T Consensus 436 ~~~l~~~l~~~~~~~G~~~~~~l~~ 460 (491)
T 1zfj_A 436 VFQMLGGIRSGMGYVGAGDIQELHE 460 (491)
T ss_dssp HHHHHHHHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcccHHHHHh
Confidence 77788999999999999 9988864
No 172
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.94 E-value=1.2e-08 Score=106.80 Aligned_cols=186 Identities=23% Similarity=0.222 Sum_probs=119.3
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEec--cCCCCCCC--CCC---cccCCCCHHHHHHHHHHHHhh-CCcc
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNL--SCPHGMGE--RGM---GLACGQDPEMVRNISLWVRSS-VKIP 634 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~--scP~~~~~--~~~---G~~~~~~~~~~~~ii~~v~~~-~~~P 634 (842)
+.+|..+++|+ +.+.+.+.++.++++|||+|||.+ |-|-..+. ... -..-|.+.+.+.++++.+|+. +++|
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~P 97 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMP 97 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 57899999875 358999999999999999999994 55632110 000 000134566788999999987 8999
Q ss_pred EEEEecCCh---hcHHHHHHHHHHCCCCEEEEecCCCc----------cccCC-----CCCCC---CCccc--CC---Cc
Q psy16199 635 FFVKLTPNI---TNITDIAKAAYEGKADGVSAINTVSG----------LMSLS-----ADGNP---WPAVG--TK---KL 688 (842)
Q Consensus 635 v~vKl~p~~---~~~~~~a~~~~~~G~d~i~v~nt~~~----------~~~~~-----~~~~~---~p~~~--~~---~~ 688 (842)
+++-.-.|. ..+.++++.+.++|+|++++..-... ..+++ ..++. ...+. .. ..
T Consensus 98 ivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 98 IGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYL 177 (267)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred EEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 888542221 14578899999999999887432100 00000 00000 00000 00 00
Q ss_pred cccCCCCCCc--cccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 689 TTYGGVSGNA--TRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 689 ~~~gG~sG~~--~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
-..-|..|.. ..+...+.++++++.. ++||+..|||++++++.+.+.+|||+|-|||+++.
T Consensus 178 vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp SCCCCCC--------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred EecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0011122322 2344578899999887 79999999999999999999999999999999983
No 173
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.93 E-value=9.7e-09 Score=105.43 Aligned_cols=131 Identities=15% Similarity=0.146 Sum_probs=93.0
Q ss_pred HHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEe
Q psy16199 585 KTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAI 664 (842)
Q Consensus 585 ~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~ 664 (842)
.+.++|+|+|-++...- .+|+.+.++++.+++. ++++++.+.. .+.++.+.+.|+|.|.++
T Consensus 96 ~~~~aGad~I~l~~~~~-------------~~p~~l~~~i~~~~~~-g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 96 ALAQAGADIIAFDASFR-------------SRPVDIDSLLTRIRLH-GLLAMADCST-----VNEGISCHQKGIEFIGTT 156 (229)
T ss_dssp HHHHHTCSEEEEECCSS-------------CCSSCHHHHHHHHHHT-TCEEEEECSS-----HHHHHHHHHTTCSEEECT
T ss_pred HHHHcCCCEEEECcccc-------------CChHHHHHHHHHHHHC-CCEEEEecCC-----HHHHHHHHhCCCCEEEec
Confidence 34557999999975431 2345677888888764 7888887643 456788999999999653
Q ss_pred cCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEE
Q psy16199 665 NTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 665 nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv 744 (842)
|.-. +..+ .. ....++.++++++. ++|||+.|||.|++|+.+++.+||++|+|
T Consensus 157 ~~g~--------------------t~~~-~~----~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 157 LSGY--------------------TGPI-TP----VEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp TTTS--------------------SSSC-CC----SSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CccC--------------------CCCC-cC----CCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 3211 0000 11 12247888888876 79999999999999999999999999999
Q ss_pred ehhhhccCchhHHHHHHH
Q psy16199 745 CSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 745 ~ta~l~~gp~~~~~i~~~ 762 (842)
|++++. ...+.+++.+.
T Consensus 210 Gsai~~-p~~~~~~f~~~ 226 (229)
T 3q58_A 210 GSAITR-IEHICQWFSHA 226 (229)
T ss_dssp CHHHHC-HHHHHHHHHHH
T ss_pred chHhcC-hHHHHHHHHHH
Confidence 999993 23344444443
No 174
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.92 E-value=1.5e-08 Score=104.26 Aligned_cols=134 Identities=19% Similarity=0.179 Sum_probs=95.1
Q ss_pred HHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEE
Q psy16199 584 KKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 584 ~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v 663 (842)
+.+.++|+|+|-++...- .+|+.+.++++.+++. ++++++.+.. .+.++.+++.|+|.|.+
T Consensus 95 ~~~~~~Gad~V~l~~~~~-------------~~p~~l~~~i~~~~~~-g~~v~~~v~t-----~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 95 DALAQAGAAIIAVDGTAR-------------QRPVAVEALLARIHHH-HLLTMADCSS-----VDDGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHHHTCSEEEEECCSS-------------CCSSCHHHHHHHHHHT-TCEEEEECCS-----HHHHHHHHHTTCSEEEC
T ss_pred HHHHHcCCCEEEECcccc-------------CCHHHHHHHHHHHHHC-CCEEEEeCCC-----HHHHHHHHhCCCCEEEE
Confidence 334557999999975431 2345677888888764 7888886643 45678899999999865
Q ss_pred ecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEE
Q psy16199 664 INTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743 (842)
Q Consensus 664 ~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vq 743 (842)
+|.-. +..+.. ....++.++++++. ++|||+.|||.|++|+.+++.+||++|+
T Consensus 156 ~~~g~--------------------t~~~~~-----~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~ 208 (232)
T 3igs_A 156 TMSGY--------------------TTPDTP-----EEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVT 208 (232)
T ss_dssp TTTTS--------------------SSSSCC-----SSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred cCccC--------------------CCCCCC-----CCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 33211 000001 12247888888876 7999999999999999999999999999
Q ss_pred EehhhhccCchhHHHHHHHHH
Q psy16199 744 ICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 744 v~ta~l~~gp~~~~~i~~~l~ 764 (842)
||++++ +.....+++.+.++
T Consensus 209 VGsal~-~p~~~~~~~~~~i~ 228 (232)
T 3igs_A 209 VGSAIT-RLEHICGWYNDALK 228 (232)
T ss_dssp ECHHHH-CHHHHHHHHHHHHH
T ss_pred EehHhc-CHHHHHHHHHHHHH
Confidence 999999 32344555555544
No 175
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.89 E-value=1.7e-08 Score=102.15 Aligned_cols=164 Identities=16% Similarity=0.161 Sum_probs=103.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+|+++. +.+.+++.++++.+.++|+|+|++++.+|+. .+.++.+|+.....+.+.... .
T Consensus 10 ~~~i~~~~-~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~-----------------~~~i~~ir~~~~~~~~ig~~~-v 70 (205)
T 1wa3_A 10 HKIVAVLR-ANSVEEAKEKALAVFEGGVHLIEITFTVPDA-----------------DTVIKELSFLKEKGAIIGAGT-V 70 (205)
T ss_dssp HCEEEEEC-CSSHHHHHHHHHHHHHTTCCEEEEETTSTTH-----------------HHHHHHTHHHHHTTCEEEEES-C
T ss_pred CCEEEEEe-cCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-----------------HHHHHHHHHHCCCCcEEEecc-c
Confidence 68999996 5789999999999999999999999987631 245666776542123333321 1
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCC-CCCCCCcccC-CCcc-----ccCCCCCCcccc---chHHHHHHHHhh
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSA-DGNPWPAVGT-KKLT-----TYGGVSGNATRP---MGLKAVSSIAKM 713 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~-~~~~~p~~~~-~~~~-----~~gG~sG~~~~p---~al~~v~~i~~~ 713 (842)
.+.. -++.+.+.|+|+| ++..+.. ..++. .....|.+.. +..+ ..-|.+.-.+.| ..++.++++++.
T Consensus 71 ~~~~-~~~~a~~~Gad~i-v~~~~~~-~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~ 147 (205)
T 1wa3_A 71 TSVE-QCRKAVESGAEFI-VSPHLDE-EISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGP 147 (205)
T ss_dssp CSHH-HHHHHHHHTCSEE-ECSSCCH-HHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTT
T ss_pred CCHH-HHHHHHHcCCCEE-EcCCCCH-HHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHh
Confidence 2333 3677888999999 5443320 00000 0000111100 0000 000111101122 346778888887
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
++++||++.|||. .+++.+++.+||++|.++|+++.
T Consensus 148 ~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 148 FPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp CTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 7679999999996 89999999999999999999996
No 176
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.89 E-value=1.4e-08 Score=106.34 Aligned_cols=186 Identities=22% Similarity=0.218 Sum_probs=118.6
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEec--cCCCCCCC--CC-Ccc--cCCCCHHHHHHHHHHHHhh-CCcc
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNL--SCPHGMGE--RG-MGL--ACGQDPEMVRNISLWVRSS-VKIP 634 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~--scP~~~~~--~~-~G~--~~~~~~~~~~~ii~~v~~~-~~~P 634 (842)
+.+|..+++|+ +.+.+.++++.++++|||.|||.+ |-|...+. .. .-. .-|.+.+.+.++++.+|+. .++|
T Consensus 20 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~P 99 (271)
T 3nav_A 20 GAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETP 99 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 57888898886 478999999999999999999995 55521100 00 000 0024566778899999987 7999
Q ss_pred EEEEecCC--h-hcHHHHHHHHHHCCCCEEEEecCCCcc----------ccCC-----CCCCC---CCcccCC-----Cc
Q psy16199 635 FFVKLTPN--I-TNITDIAKAAYEGKADGVSAINTVSGL----------MSLS-----ADGNP---WPAVGTK-----KL 688 (842)
Q Consensus 635 v~vKl~p~--~-~~~~~~a~~~~~~G~d~i~v~nt~~~~----------~~~~-----~~~~~---~p~~~~~-----~~ 688 (842)
+++-.-.| + ..+.++++.+.++|+|++++..-.... .+++ ..++. ...+... ..
T Consensus 100 ivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~ 179 (271)
T 3nav_A 100 IGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYL 179 (271)
T ss_dssp EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred EEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEE
Confidence 99854222 1 156789999999999998873211000 0000 00000 0000000 00
Q ss_pred cccCCCCCCc--cccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 689 TTYGGVSGNA--TRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 689 ~~~gG~sG~~--~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
-..-|+.|.. +.+...++++++++.. ++||+..+||++++++.+.+.+|||+|-|||+++.
T Consensus 180 vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 180 LSRAGVTGAETKANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp CCCC--------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred EeccCCCCcccCCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0011223322 2233467889998887 79999999999999999999999999999999983
No 177
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.88 E-value=7e-08 Score=101.35 Aligned_cols=183 Identities=22% Similarity=0.264 Sum_probs=113.8
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEec--cCCCCCCCCCC------cccCCCCHHHHHHHHHHHHhhC-Cc
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNL--SCPHGMGERGM------GLACGQDPEMVRNISLWVRSSV-KI 633 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~--scP~~~~~~~~------G~~~~~~~~~~~~ii~~v~~~~-~~ 633 (842)
+.+|.-+..|+ +.+++.++++.++++|+|+|||++ |.|...+.. . -..-|.+.+.+.++++.+++.+ ++
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~-i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPT-IQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHH-HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHH-HHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 45676676664 458999999999999999999986 333210000 0 0000234566778899999988 89
Q ss_pred cEEEEecCChh-----cHHHHHHHHHHCCCCEEEEecCCCcc----------ccCC-CC--CCCCC--c---cc--CCC-
Q psy16199 634 PFFVKLTPNIT-----NITDIAKAAYEGKADGVSAINTVSGL----------MSLS-AD--GNPWP--A---VG--TKK- 687 (842)
Q Consensus 634 Pv~vKl~p~~~-----~~~~~a~~~~~~G~d~i~v~nt~~~~----------~~~~-~~--~~~~p--~---~~--~~~- 687 (842)
|+++ ++ +.. .+..+++.+.++|+||+++..-.... .+++ +. ...-+ . +. ..+
T Consensus 96 Pi~~-m~-y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gf 173 (262)
T 2ekc_A 96 PFLL-MT-YYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEM 173 (262)
T ss_dssp CEEE-EC-CHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSC
T ss_pred CEEE-Ee-cCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCC
Confidence 9988 32 222 34788999999999999884321100 0000 00 00000 0 00 000
Q ss_pred --ccccCCCCCCcc--c-cchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 688 --LTTYGGVSGNAT--R-PMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 688 --~~~~gG~sG~~~--~-p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
....-|..|... . +...++++++++.. ++||+..+||++++++.+ +.+|||+|.|||+++..
T Consensus 174 iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 174 TYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKL 240 (262)
T ss_dssp EEEESSCC---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHH
T ss_pred EEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhh
Confidence 001113333331 1 22358899999988 899999999999999999 88999999999999954
No 178
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.88 E-value=3.6e-09 Score=110.82 Aligned_cols=153 Identities=11% Similarity=0.005 Sum_probs=108.6
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCC-----HHHHHHHHHHHH-hhCCccEEE
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQD-----PEMVRNISLWVR-SSVKIPFFV 637 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~-----~~~~~~ii~~v~-~~~~~Pv~v 637 (842)
.|+. +.+|.. . . ++.+.+ +|||.|-+|- .+..+ |+.+.++++.+. +.+-+++-+
T Consensus 77 ~pv~--vgGGir-~-~-~~~~~l--~Ga~~Viigs-------------~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~ 136 (260)
T 2agk_A 77 QFLQ--VGGGIN-D-T-NCLEWL--KWASKVIVTS-------------WLFTKEGHFQLKRLERLTELCGKDRIVVDLSC 136 (260)
T ss_dssp TTSE--EESSCC-T-T-THHHHT--TTCSCEEECG-------------GGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred ceEE--EeCCCC-H-H-HHHHHh--cCCCEEEECc-------------HHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEe
Confidence 4555 455544 2 2 555555 7999888753 33355 999999999997 443344444
Q ss_pred E----------ecCCh----hcHH-HHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccc
Q psy16199 638 K----------LTPNI----TNIT-DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702 (842)
Q Consensus 638 K----------l~p~~----~~~~-~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~ 702 (842)
| +..-- .++. ++++.+++. ++.|+++.. +.-|.++|+
T Consensus 137 k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i----------------------~~dG~~~G~----- 188 (260)
T 2agk_A 137 RKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAA----------------------DVEGLCGGI----- 188 (260)
T ss_dssp EEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-----------------------------CCC-----
T ss_pred eecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEee----------------------ccccCcCCC-----
Confidence 4 22110 1445 999999999 999999543 223445664
Q ss_pred hHHHHHHHHhhCC---CCcEEEecCcCCHHHHHHHHHh--CCCEEEEehhh-hccCc-hhHHHHHHHHH
Q psy16199 703 GLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQA--GAHAVQICSAV-QNQDF-TVVDDYITGLQ 764 (842)
Q Consensus 703 al~~v~~i~~~~~---~ipIi~~GGI~t~~da~~~l~~--GA~~Vqv~ta~-l~~gp-~~~~~i~~~l~ 764 (842)
.+++++++++.++ ++|||++|||.|.+|+.+++.+ ||++|++++++ ++.|+ +.+.++++.++
T Consensus 189 d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 189 DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHHH
Confidence 2899999999874 6999999999999999999987 99999999998 66788 98988877654
No 179
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.86 E-value=9.7e-09 Score=108.33 Aligned_cols=185 Identities=19% Similarity=0.194 Sum_probs=113.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.-+|.+.. + .+.|+.++++||++|-.....|.. .+...|.+.+.+|+.+.++. +.+++||+.|..-..
T Consensus 18 gGvI~d~~---~----~e~A~~ae~aGA~aI~~l~~v~~d-~~~~~G~arm~~p~~i~~I~----~av~iPV~~K~rig~ 85 (330)
T 2yzr_A 18 HGVVMDVT---N----VEQAQIAEEAGAVAVMALERVPAD-IRAAGGVARMSDPALIEEIM----DAVSIPVMAKCRIGH 85 (330)
T ss_dssp TSEEEEES---S----HHHHHHHHHHTCSEEEECSSCHHH-HC--CCCCCCCCHHHHHHHH----HHCSSCEEEEEETTC
T ss_pred CCceeeCC---H----HHHHHHHHHcCCCEEEecCCcccc-ccCCcchhhcCCHHHHHHHH----HhcCCCeEEEEeecc
Confidence 34666652 2 457777788899999443333322 23445778889999887775 467899999998654
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCcccc-CCCCC--CCCCccc--------------------CCC-------------
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMS-LSADG--NPWPAVG--------------------TKK------------- 687 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~-~~~~~--~~~p~~~--------------------~~~------------- 687 (842)
..-++.+++.|+|.|..+..+..... ..+.. -..|.+. .++
T Consensus 86 ---~~e~qilea~GaD~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~v~H 162 (330)
T 2yzr_A 86 ---TTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRH 162 (330)
T ss_dssp ---HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHH
T ss_pred ---hHHHHHHHHcCCCEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhHHHH
Confidence 24478888899999987654433211 00100 0000000 000
Q ss_pred -cc-------------------------cc----------CCC-----CCCccc---------cchHHHHHHHHhhCCCC
Q psy16199 688 -LT-------------------------TY----------GGV-----SGNATR---------PMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 688 -~~-------------------------~~----------gG~-----sG~~~~---------p~al~~v~~i~~~~~~i 717 (842)
|+ .+ =|+ ..-+++ +..+++++++++.. ++
T Consensus 163 ~r~~~~~~~~~s~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~-~I 241 (330)
T 2yzr_A 163 MRLMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG-RL 241 (330)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT-SC
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC-CC
Confidence 00 00 011 000001 23448888888876 68
Q ss_pred cE--EEecCcCCHHHHHHHHHhCCCEEEEehhhhccC-c-hhHHHHHHHHH
Q psy16199 718 PI--LGIGGIDSADVALQFIQAGAHAVQICSAVQNQD-F-TVVDDYITGLQ 764 (842)
Q Consensus 718 pI--i~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~g-p-~~~~~i~~~l~ 764 (842)
|| ++.|||.|++|+.+++.+||++|+|+|+++..+ | ...+.+.+.++
T Consensus 242 PVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~ 292 (330)
T 2yzr_A 242 PVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATY 292 (330)
T ss_dssp SSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHH
Confidence 98 699999999999999999999999999999542 3 33444444433
No 180
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.86 E-value=3.8e-08 Score=104.26 Aligned_cols=188 Identities=20% Similarity=0.190 Sum_probs=115.7
Q ss_pred HHHHHHhhcCcCEEEE--eccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCC
Q psy16199 581 ELSKKTEKAGADALEL--NLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKA 658 (842)
Q Consensus 581 ~~a~~~~~agaD~iel--N~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~ 658 (842)
+.|+..+++|||+|-+ |++|..... . |...+.+++ .++.+++.+++||++|...++ .+.++.++++||
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~-~--g~~R~~~~~----~i~~i~~~v~iPvl~k~~i~~---ide~qil~aaGA 101 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNT-D--GVARSVDPL----KIEEIRKCISINVLAKVRIGH---FVEAQILEELKV 101 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----C-C--CCCCCCCHH----HHHHHHTTCCSEEEEEEETTC---HHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhc-C--CcccCCCHH----HHHHHHHhcCCCEEEeccCCc---HHHHHHHHHcCC
Confidence 4466677789998754 566763211 1 112234554 456678888999999986654 556788889999
Q ss_pred CEEEEecCCCccccCC-CCC--CCCCcc-cCCCcc-------------ccCCC--CCC----------------------
Q psy16199 659 DGVSAINTVSGLMSLS-ADG--NPWPAV-GTKKLT-------------TYGGV--SGN---------------------- 697 (842)
Q Consensus 659 d~i~v~nt~~~~~~~~-~~~--~~~p~~-~~~~~~-------------~~gG~--sG~---------------------- 697 (842)
|.|..+.-......+. +.. ...+.+ +.+... ...|. +|.
T Consensus 102 D~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~ 181 (297)
T 4adt_A 102 DMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLD 181 (297)
T ss_dssp SEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhcccc
Confidence 9994432111100111 111 012211 100000 01111 221
Q ss_pred --cc------ccchHHHHHHHHhhCCCCcEE--EecCcCCHHHHHHHHHhCCCEEEEehhhhccC-c-hhHHHHHHHHHH
Q psy16199 698 --AT------RPMGLKAVSSIAKMFPNFPIL--GIGGIDSADVALQFIQAGAHAVQICSAVQNQD-F-TVVDDYITGLQT 765 (842)
Q Consensus 698 --~~------~p~al~~v~~i~~~~~~ipIi--~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~g-p-~~~~~i~~~l~~ 765 (842)
.+ ....++.++++++.+ ++||+ +.|||.+++|+.+++.+||++|.|||+++..+ | ..++++.+.++.
T Consensus 182 ~d~L~t~~~~~~~~~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~ 260 (297)
T 4adt_A 182 ESEVYNFAKKLRAPIDLILLTRKLK-RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN 260 (297)
T ss_dssp TTTHHHHHHHHTCCHHHHHHHHHHT-SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh
Confidence 00 134578888888887 58876 99999999999999999999999999999643 3 567788888888
Q ss_pred HHHhcCC-CccccCC
Q psy16199 766 LLYLKST-QLKGWDG 779 (842)
Q Consensus 766 ~m~~~g~-~i~~~~~ 779 (842)
|+....+ +++.-.|
T Consensus 261 ~~~~~~~~~i~~~~~ 275 (297)
T 4adt_A 261 FNNPKILLNVSLGLG 275 (297)
T ss_dssp TTCHHHHHHTTTTCC
T ss_pred hCCHHHHHHHHhhcc
Confidence 8877776 6665544
No 181
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.86 E-value=3.3e-08 Score=103.14 Aligned_cols=158 Identities=17% Similarity=0.170 Sum_probs=107.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhh-----CCc-----
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS-----VKI----- 633 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~-----~~~----- 633 (842)
.|++++-+. .+++++.+ +.++|||+|.++.. +..+++.+.++++..... .+.
T Consensus 78 ipvi~~g~i-~~~~~~~~----~~~~Gad~V~i~~~-------------~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g 139 (253)
T 1h5y_A 78 IPVLVGGGV-RSLEDATT----LFRAGADKVSVNTA-------------AVRNPQLVALLAREFGSQSTVVAIDAKWNGE 139 (253)
T ss_dssp SCEEEESSC-CSHHHHHH----HHHHTCSEEEESHH-------------HHHCTHHHHHHHHHHCGGGEEEEEEEEECSS
T ss_pred CCEEEECCC-CCHHHHHH----HHHcCCCEEEEChH-------------HhhCcHHHHHHHHHcCCCcEEEEEEeecCCC
Confidence 688877643 45665433 33469999999731 124566666666654311 111
Q ss_pred cEEEEecCCh----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 634 PFFVKLTPNI----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 634 Pv~vKl~p~~----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
++.|++.... .+..+.++.+.+.|+|.|.+++... .|..+|. .++.+++
T Consensus 140 ~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~----------------------~g~~~~~-----~~~~i~~ 192 (253)
T 1h5y_A 140 YYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDR----------------------DGTGLGY-----DVELIRR 192 (253)
T ss_dssp SEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTT----------------------TTTCSCC-----CHHHHHH
T ss_pred cEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccC----------------------CCCcCcC-----CHHHHHH
Confidence 1456654432 3567889999999999999965321 1111221 3788889
Q ss_pred HHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcCC
Q psy16199 710 IAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKST 772 (842)
Q Consensus 710 i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~ 772 (842)
+++.. ++||+++|||.+.+|+.+++++||++|+++|+++.. ..-+ +++.++|...|+
T Consensus 193 l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~-~~~~----~~~~~~l~~~g~ 249 (253)
T 1h5y_A 193 VADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFR-VLSI----AQVKRYLKERGV 249 (253)
T ss_dssp HHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT-SSCH----HHHHHHHHHTTC
T ss_pred HHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcC-CCCH----HHHHHHHHHcCC
Confidence 98887 799999999999999999999999999999999954 3333 445556666665
No 182
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.83 E-value=5.5e-08 Score=101.77 Aligned_cols=153 Identities=19% Similarity=0.157 Sum_probs=103.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHh-hCCccE-------
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRS-SVKIPF------- 635 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~-~~~~Pv------- 635 (842)
.|+++.-+. .++++..++ .++|||++-+.- ....+|+.+.++++.... ..-+.+
T Consensus 75 ipvi~~ggI-~~~~~~~~~----~~~Gad~V~lg~-------------~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g 136 (253)
T 1thf_D 75 IPFTVGGGI-HDFETASEL----ILRGADKVSINT-------------AAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 136 (253)
T ss_dssp SCEEEESSC-CSHHHHHHH----HHTTCSEEEESH-------------HHHHCTHHHHHHHHHHCGGGEEEEEEEEEETT
T ss_pred CCEEEeCCC-CCHHHHHHH----HHcCCCEEEECh-------------HHHhChHHHHHHHHHcCCCcEEEEEEEEccCC
Confidence 688876543 355553333 346999998742 223556777777776632 111222
Q ss_pred --EEEecCCh----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 636 --FVKLTPNI----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 636 --~vKl~p~~----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
.|++.... .+..+.++.+++.|++.|.++++.. .|..+|. .++.+++
T Consensus 137 ~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~----------------------~g~~~g~-----~~~~~~~ 189 (253)
T 1thf_D 137 EFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDR----------------------DGTKSGY-----DTEMIRF 189 (253)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTT----------------------TTSCSCC-----CHHHHHH
T ss_pred cEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccC----------------------CCCCCCC-----CHHHHHH
Confidence 33332211 1477889999999999999864311 1223332 2788899
Q ss_pred HHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 710 IAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 710 i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+++.+ ++|||++|||.+++|+.+++.+||++|+++|+++. +++-+.+.++.|
T Consensus 190 l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~-~~~~~~~~~~~l 241 (253)
T 1thf_D 190 VRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF-REIDVRELKEYL 241 (253)
T ss_dssp HGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT-TCSCHHHHHHHH
T ss_pred HHHhc-CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc-CCCCHHHHHHHH
Confidence 98887 79999999999999999999999999999999994 465555554443
No 183
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.83 E-value=3.4e-08 Score=102.86 Aligned_cols=153 Identities=12% Similarity=0.121 Sum_probs=103.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEE-----
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK----- 638 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vK----- 638 (842)
.|+++.-+. .++++ ++.+.++|||.|.++.. ...+|+.+.++++..-....+.+-+|
T Consensus 76 ipv~v~ggI-~~~~~----~~~~l~~Gad~V~lg~~-------------~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~ 137 (244)
T 1vzw_A 76 IKVELSGGI-RDDDT----LAAALATGCTRVNLGTA-------------ALETPEWVAKVIAEHGDKIAVGLDVRGTTLR 137 (244)
T ss_dssp SEEEEESSC-CSHHH----HHHHHHTTCSEEEECHH-------------HHHCHHHHHHHHHHHGGGEEEEEEEETTEEC
T ss_pred CcEEEECCc-CCHHH----HHHHHHcCCCEEEECch-------------HhhCHHHHHHHHHHcCCcEEEEEEccCCEEE
Confidence 688887653 35555 33334469999988532 23567777777776543322233332
Q ss_pred ecCC---hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC
Q psy16199 639 LTPN---ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP 715 (842)
Q Consensus 639 l~p~---~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~ 715 (842)
.... ..+..++++.+++.|++.|.++++..+ |..+|. .++.++++++.+
T Consensus 138 ~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~----------------------~~~~g~-----~~~~~~~i~~~~- 189 (244)
T 1vzw_A 138 GRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKD----------------------GTLQGP-----NLELLKNVCAAT- 189 (244)
T ss_dssp CSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-----------------------------CC-----CHHHHHHHHHTC-
T ss_pred EcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcc----------------------cccCCC-----CHHHHHHHHHhc-
Confidence 1110 015678899999999999999764221 112221 388889999887
Q ss_pred CCcEEEecCcCCHHHHHHHHHh---CCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 716 NFPILGIGGIDSADVALQFIQA---GAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 716 ~ipIi~~GGI~t~~da~~~l~~---GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
++|||++|||.+++|+.+++++ ||++|+++|+++. +++.+.++++.+
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~-~~~~~~~~~~~~ 239 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYA-KAFTLEEALEAT 239 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHT-TSSCHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHc-CCCCHHHHHHHh
Confidence 7999999999999999999998 9999999999994 566666665544
No 184
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.82 E-value=3.8e-08 Score=106.34 Aligned_cols=246 Identities=13% Similarity=0.050 Sum_probs=140.3
Q ss_pred ceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcceeeeEe
Q psy16199 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIEL 427 (842)
Q Consensus 348 L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~n~e~ 427 (842)
|++++.|++++||+++|+++++.+.+.++.+.+.|+|++++||++.++.. +|++||+.+. ..+++|...
T Consensus 2 l~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~-gn~~pr~~~~----------~~~~in~~g 70 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKRE-GNPLPRYVDL----------ELGSINSMG 70 (311)
T ss_dssp CCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBC-CSCSCCEEEE----------TTEEEECCC
T ss_pred CceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccC-CCCCCcEEec----------ccceeecCC
Confidence 56789999999999999998888999999999999999999999998764 7899998764 146788844
Q ss_pred ecccchhhHHhhhhcCCCCcchhhhHHHHHHhhcccccc--CCccccc-CCCCCCCCCChhHHHHhhhhhhCc----ccc
Q psy16199 428 ISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLN--SDGVSLQ-NGLPKRQINTPVETILSVKDVIGQ----AVQ 500 (842)
Q Consensus 428 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~-~g~dk~~~~~~~~~~~~l~~~~G~----~~g 500 (842)
++....+.|+ + + +...+ +.. ..|++.+ .|.+.. -=.++.+.+.+. |+ ++.
T Consensus 71 ~~~~g~~~~~---~-------------~-~~~~~--~~~~~~~p~~~~i~g~~~~---~~~~~a~~~~~~-g~d~~iein 127 (311)
T 1jub_A 71 LPNLGFDYYL---D-------------Y-VLKNQ--KENAQEGPIFFSIAGMSAA---ENIAMLKKIQES-DFSGITELN 127 (311)
T ss_dssp CCBSCHHHHH---H-------------H-HHHHH--HHTCSSSCCEEEECCSSHH---HHHHHHHHHHHS-CCCSEEEEE
T ss_pred CCCccHHHHH---H-------------H-HHHHH--HhcCCCCCEEEEcCCCCHH---HHHHHHHHHHhc-CCCeEEEEe
Confidence 4444344333 1 1 11111 011 2454442 122211 002222222221 21 221
Q ss_pred ccccCccCCCcceeEeeccCCccccCCccccCCCccchhhhhcCcccccccccccccccc-ccccceEEEeccCCCHhHH
Q psy16199 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT-LCLSILIASIMCTYNKDDW 579 (842)
Q Consensus 501 ~vt~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~~G~dai~~~~~~~~~~~~~~~~~~~-~~~~pvi~si~~g~~~e~~ 579 (842)
=-+|.. .+ ++ .+|.+-+....+. ..++ .++.|+++-+..+.+.+++
T Consensus 128 ~~~P~~-~g-----------------~~-~~g~~~e~~~~iv--------------~~vr~~~~~Pv~vKi~~~~~~~~~ 174 (311)
T 1jub_A 128 LSCPNV-PG-----------------EP-QLAYDFEATEKLL--------------KEVFTFFTKPLGVKLPPYFDLVHF 174 (311)
T ss_dssp SCCCCS-SS-----------------CC-CGGGCHHHHHHHH--------------HHHTTTCCSCEEEEECCCCSHHHH
T ss_pred ccCCCC-CC-----------------cc-cccCCHHHHHHHH--------------HHHHHhcCCCEEEEECCCCCHHHH
Confidence 001100 00 00 0111111111111 1111 1247999988755677889
Q ss_pred HHHHHHHhhcCcCEEEEeccC-------CCCC--CC---CCCcccCCC-CHHHHHHHHHHHHhhC--CccEEEEecCChh
Q psy16199 580 LELSKKTEKAGADALELNLSC-------PHGM--GE---RGMGLACGQ-DPEMVRNISLWVRSSV--KIPFFVKLTPNIT 644 (842)
Q Consensus 580 ~~~a~~~~~agaD~ielN~sc-------P~~~--~~---~~~G~~~~~-~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~ 644 (842)
.++++.++++|+|+|.+.-.. +... .. ...|.--+. ......+.++.+++.+ ++||+. ..++.
T Consensus 175 ~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~--~GGI~ 252 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIG--TGGIE 252 (311)
T ss_dssp HHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEE--ESSCC
T ss_pred HHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEE--ECCCC
Confidence 999999999999999884221 0000 00 011110011 1234467889999988 899875 45566
Q ss_pred cHHHHHHHHHHCCCCEEEE
Q psy16199 645 NITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v 663 (842)
+..+..+.+ ..|||+|.+
T Consensus 253 ~~~da~~~l-~~GAd~V~v 270 (311)
T 1jub_A 253 TGQDAFEHL-LCGATMLQI 270 (311)
T ss_dssp SHHHHHHHH-HHTCSEEEE
T ss_pred CHHHHHHHH-HcCCCEEEE
Confidence 666666666 579999988
No 185
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.81 E-value=1.1e-09 Score=114.33 Aligned_cols=153 Identities=19% Similarity=0.227 Sum_probs=28.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHH-Hhh----CCcc----
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV-RSS----VKIP---- 634 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v-~~~----~~~P---- 634 (842)
.|++++=.. .++++..++. +.|||++.+. ..+..+|+.+.++.+.. .+. ++.+
T Consensus 80 ipvi~~Ggi-~~~~~~~~~l----~~Gad~V~ig-------------~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~ 141 (247)
T 3tdn_A 80 LPIIASGGA-GKMEHFLEAF----LRGADKVSIN-------------TAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 141 (247)
T ss_dssp SCEEEESCC-CSHHHHHHHH----HTTCSEECCS-------------HHHHHCTHHHHHHHHHHC---------------
T ss_pred CCEEEeCCC-CCHHHHHHHH----HcCCCeeehh-------------hHHhhChHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 688876322 3566654443 4589998763 33346777777777665 221 1222
Q ss_pred -EEEEecC----ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 635 -FFVKLTP----NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 635 -v~vKl~p----~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
..|++.. .-.+..++++.+++.|++.|.++++.. .|.++|. .++.+++
T Consensus 142 ~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~----------------------~g~~~g~-----~~~~~~~ 194 (247)
T 3tdn_A 142 EFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDR----------------------DGTKSGY-----DTEMIRF 194 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccC----------------------CCCcCCC-----CHHHHHH
Confidence 1233321 012566789999999999999865411 1222332 2567788
Q ss_pred HHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 710 IAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 710 i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+++.+ ++|||++|||.|++|+.+++.+||++|+|+|+++ .+|+++.++.+.+
T Consensus 195 i~~~~-~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~-~~p~~~~~~~~~~ 246 (247)
T 3tdn_A 195 VRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAV-ENPSLITQIAQTF 246 (247)
T ss_dssp ------------------------------------------------------
T ss_pred HHHhC-CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHH-cCcHHHHHHHHhc
Confidence 88887 7999999999999999999999999999999999 5799999887654
No 186
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.80 E-value=4.9e-08 Score=112.29 Aligned_cols=165 Identities=15% Similarity=0.076 Sum_probs=113.9
Q ss_pred hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-C-ccEEEEecCChhcHHHHHHHHH
Q psy16199 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-K-IPFFVKLTPNITNITDIAKAAY 654 (842)
Q Consensus 577 e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~-~Pv~vKl~p~~~~~~~~a~~~~ 654 (842)
++..+.++.+.++|++.+.++.+. .++..+.+.++++++.. + +||+++-..+ .+.++.+.
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~--------------g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t----~~~a~~l~ 302 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSD--------------GFSEWQKITIGWIREKYGDKVKVGAGNIVD----GEGFRYLA 302 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSC--------------CCSHHHHHHHHHHHHHHGGGSCEEEEEECS----HHHHHHHH
T ss_pred hhHHHHHHHHHhhhccceEEeccc--------------CcccchhhHHHHHHHhCCCCceEeeccccC----HHHHHHHH
Confidence 333444666666799999986531 12244667778888876 5 8999876654 34578889
Q ss_pred HCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC--------CCcEEEecCcC
Q psy16199 655 EGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP--------NFPILGIGGID 726 (842)
Q Consensus 655 ~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~--------~ipIi~~GGI~ 726 (842)
++|+|+|.+.+.-++. ..+ +...| . |. | .+..+.++.+... ++|||+.|||.
T Consensus 303 ~aGad~I~Vg~~~g~~-----~~~---------r~~~~-~-g~---p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~ 362 (503)
T 1me8_A 303 DAGADFIKIGIGGGSI-----CIT---------REQKG-I-GR---G-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV 362 (503)
T ss_dssp HHTCSEEEECSSCSTT-----CCS---------TTTTC-C-CC---C-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC
T ss_pred HhCCCeEEecccCCcC-----ccc---------ccccC-C-CC---c-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC
Confidence 9999999994422210 000 00011 0 11 2 2344444433321 49999999999
Q ss_pred CHHHHHHHHHhCCCEEEEehhhhc-------------------cC-----------------------------------
Q psy16199 727 SADVALQFIQAGAHAVQICSAVQN-------------------QD----------------------------------- 752 (842)
Q Consensus 727 t~~da~~~l~~GA~~Vqv~ta~l~-------------------~g----------------------------------- 752 (842)
++.|+.++|++||++|||||.|+. .|
T Consensus 363 ~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~ 442 (503)
T 1me8_A 363 YDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGK 442 (503)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC--------------CCCEEEEECCBC
T ss_pred CHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceecccceeEecCCCCc
Confidence 999999999999999999999961 11
Q ss_pred -chhHHHHHHHHHHHHHhcCC-CccccCC
Q psy16199 753 -FTVVDDYITGLQTLLYLKST-QLKGWDG 779 (842)
Q Consensus 753 -p~~~~~i~~~l~~~m~~~g~-~i~~~~~ 779 (842)
..++..|..+|+.-|...|+ +|++++.
T Consensus 443 v~~~~~~~~~~l~~~m~~~G~~~i~~l~~ 471 (503)
T 1me8_A 443 LKDNVEASLNKVKSTMCNCGALTIPQLQS 471 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcchHHHHHh
Confidence 15688999999999999999 9999975
No 187
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.79 E-value=6.6e-09 Score=110.86 Aligned_cols=171 Identities=15% Similarity=0.119 Sum_probs=108.2
Q ss_pred cEEEEcCChhHHHHHHHHHHc-CCcEEEEEEeecCccc---------------------------c----------CCHH
Q psy16199 149 TVIVLGAGDTAFDCATSALRC-GANKVLVVFRKGCTNI---------------------------R----------AVPE 190 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~-G~~~Vtlv~r~~~~~~---------------------------~----------~~~~ 190 (842)
.|+|||||.+|+.+|..|++. |.+ |+|+++.+.... + ....
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G~~-V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPNVQ-VAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSC-EEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred CEEEECccHHHHHHHHHHHHcCCCe-EEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 399999999999999999997 875 999998753200 0 0112
Q ss_pred H-----HHHHHh-cCcEEecCCCceEEEccCCcEEEEEEEee--ccc-CCCCeeccCCceEEEECCEEEEccccCcCChh
Q psy16199 191 E-----VQLAWE-EKCEFLPFMSPVQVDVKDNKIAGMQFNRT--EQN-EKGEWVEDEEQRIKLKANYIISAFGSTLLDND 261 (842)
Q Consensus 191 ~-----~~~~~~-~gV~i~~~~~v~~v~~~~~~v~~V~~~~~--~~~-~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~ 261 (842)
+ .+.+.+ .|+++++++.++++..+++++.+|.+... ..+ .+| ..++..++.+|.||+|+|..+.-..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g----~~g~~~~i~ad~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQ----SCMDPNVMEAKIVVSSCGHDGPFGA 195 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTS----SCCCCEEEEEEEEEECCCSSSTTTT
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCcc----ccCceEEEECCEEEECCCCchHHHH
Confidence 1 223434 59999999999999766677777776531 000 011 0133467999999999998632222
Q ss_pred HHhhcC---Ccc--cCCCCCeeeCC------CCCCCCCCCeEEeccCCC----Cc---hhHHHHHHHHHHHHHHHHHHHH
Q psy16199 262 VLEAIK---PVK--LDKYGYPEVNY------TTMATSVPGVFCGGDTAN----LS---DTTVESVNDGKTAAWHIHKYIQ 323 (842)
Q Consensus 262 l~~~l~---gl~--~~~~G~i~vd~------~~~~Ts~~gVfa~GD~~~----~~---~~~~~A~~~G~~aA~~I~~~L~ 323 (842)
+...+. ++. +.....+.++. +..+|+.|++|++||++. .+ .+...|+.+|+.+|.+|.++|.
T Consensus 196 ~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 196 TGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp HHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 221110 111 11111122220 123567899999999852 11 2356788999999999999885
Q ss_pred h
Q psy16199 324 E 324 (842)
Q Consensus 324 ~ 324 (842)
.
T Consensus 276 ~ 276 (284)
T 1rp0_A 276 L 276 (284)
T ss_dssp C
T ss_pred h
Confidence 4
No 188
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.78 E-value=5.3e-08 Score=102.72 Aligned_cols=165 Identities=18% Similarity=0.100 Sum_probs=93.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHH--h-h--CCccE---
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVR--S-S--VKIPF--- 635 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~--~-~--~~~Pv--- 635 (842)
.|++++=.. .+.+++.++. +.|||++-+.-.... . ..+++.+.++++... . . ..+++
T Consensus 75 iPvi~~ggi-~~~~~i~~~~----~~Gad~v~lg~~~~~----~------~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~ 139 (266)
T 2w6r_A 75 LPIIASGGA-GKMEHFLEAF----LAGADKALAASVFHF----R------EIDMRELKEYLKKHGGSGQAVVVAIDAKRV 139 (266)
T ss_dssp SCEEEESCC-CSTHHHHHHH----HHTCSEEECCCCC----------------CHHHHHHCC----CCCEEEEEEEEEEE
T ss_pred CCEEEECCC-CCHHHHHHHH----HcCCcHhhhhHHHHh----C------CCCHHHHHHHHHHcCCCCCEEEEEEEEEec
Confidence 688886422 3556655443 359999888421110 0 015677777665543 1 1 11222
Q ss_pred ----EEEecCCh-----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHH
Q psy16199 636 ----FVKLTPNI-----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKA 706 (842)
Q Consensus 636 ----~vKl~p~~-----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~ 706 (842)
.|++. +. .+..++++.+++.|++.|.++++.. .|.++|. .++.
T Consensus 140 ~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~----------------------~g~~~g~-----~~~~ 191 (266)
T 2w6r_A 140 DGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDR----------------------DGTKSGY-----DTEM 191 (266)
T ss_dssp TTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTT----------------------TTTCSCC-----CHHH
T ss_pred CCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEEEEeecC----------------------CCCcCCC-----CHHH
Confidence 23332 12 2567889999999999999965421 1223332 2788
Q ss_pred HHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHHhcCCCcccc
Q psy16199 707 VSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGW 777 (842)
Q Consensus 707 v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~~~g~~i~~~ 777 (842)
++++++.+ ++|||++|||.+++|+.+++.+||++|+++|+++. +++.+.++ .++|...|+++..|
T Consensus 192 i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~-~~~~~~~~----~~~l~~~g~~~~~~ 256 (266)
T 2w6r_A 192 IRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF-REIDMREL----KEYLKKHGVNVRLE 256 (266)
T ss_dssp HHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC----------------------------
T ss_pred HHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc-CCCCHHHH----HHHHHHCCCccccc
Confidence 99999987 79999999999999999999999999999999994 46655544 44555565544433
No 189
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.77 E-value=2.1e-07 Score=104.19 Aligned_cols=288 Identities=16% Similarity=0.168 Sum_probs=143.7
Q ss_pred ccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcceeee
Q psy16199 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNI 425 (842)
Q Consensus 346 ~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~n~ 425 (842)
..+.+++.|++|+||+++|++. ..+++.+....+.|||++++||++..|.. +|+.||+.+..+ ..+++|.
T Consensus 80 ~~l~~~i~Gl~~~NPvglAAG~-dk~~~~~~~l~~~GfG~v~~gtvT~~pq~-GNp~PR~~rl~e--------~~~iiN~ 149 (443)
T 1tv5_A 80 IYACTNIKHLDFINPFGVAAGF-DKNGVCIDSILKLGFSFIEIGTITPRGQT-GNAKPRIFRDVE--------SRSIINS 149 (443)
T ss_dssp GGGCEEETTEEESSSEEECTTT-TTTCSSHHHHHTTTCSEEEEEEECSSCBC-CSCSCCEEEETT--------TTEEEEC
T ss_pred ccCCeEECCEEeCCCcEECCcc-cCccHHHHHHHhcCCCEEEEeeeecCCCC-CCCCccEEeccc--------cceeeec
Confidence 4568999999999999999887 44556677788999999999999998875 899999986422 3478888
Q ss_pred EeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhc---cccc-cCCcccccCCCCCCCCCChhHHHHhhhhh---h-Cc
Q psy16199 426 ELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELN---LKKL-NSDGVSLQNGLPKRQINTPVETILSVKDV---I-GQ 497 (842)
Q Consensus 426 e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~g~~~g~dk~~~~~~~~~~~~l~~~---~-G~ 497 (842)
++++|++- +...+++.+.-. ..+. ...|+|++-+-.|..-+...+.......+ . ++
T Consensus 150 ---------------~GfnN~G~-~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~i 213 (443)
T 1tv5_A 150 ---------------CGFNNMGC-DKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYI 213 (443)
T ss_dssp ---------------CCSCBSCH-HHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEE
T ss_pred ---------------cccCChhH-HHHHHHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEE
Confidence 78888772 222233321110 0011 13577776555443212222222222222 0 11
Q ss_pred cccccccCcc----CCCcceeEeeccC--Ccc--ccC-CccccCCCccchhhhhcC----cccccccccccccc----cc
Q psy16199 498 AVQRVTNYTE----LDNKKQVVALIND--DMC--INC-GKCYMACNDSGYQAITFH----PETHQAHVTDECTG----CT 560 (842)
Q Consensus 498 ~~g~vt~~~~----~~n~~~~~~~~~~--~~~--in~-~~c~~Gfn~~G~dai~~~----~~~~~~~~~~~~~~----~~ 560 (842)
|+-==+|... ..++..+..++.. +++ +.. +.--+|..-.++..+... +.. ..+..+.+.. .+
T Consensus 214 eiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~-~~~~~~~~~~~~~~~~ 292 (443)
T 1tv5_A 214 AINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKN-NSHMMKDAKDNFLWFN 292 (443)
T ss_dssp EEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC---------------------------------------CCCCS
T ss_pred EEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhccccc-chhhhhhhhhcchhcc
Confidence 2210001000 0000000000000 000 000 000000000000000000 000 0000000000 00
Q ss_pred -ccccc-eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCC----CCCcccCCC-CHHHHHHHHHHHHhhC--
Q psy16199 561 -LCLSI-LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGE----RGMGLACGQ-DPEMVRNISLWVRSSV-- 631 (842)
Q Consensus 561 -~~~~p-vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~----~~~G~~~~~-~~~~~~~ii~~v~~~~-- 631 (842)
..+.| |++-|....+.+++.++|+.++++|+|+|.+.-........ ...|.--+. ......+++..+++.+
T Consensus 293 ~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~ 372 (443)
T 1tv5_A 293 TTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK 372 (443)
T ss_dssp SSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCC
Confidence 12468 89998655667799999999999999999986332210000 011111111 1223468889999988
Q ss_pred CccEEEEecCChhcHHHHHHHHHHCCCCEEEE
Q psy16199 632 KIPFFVKLTPNITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 632 ~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v 663 (842)
++||+. ...+.+..+..+.+ .+|||+|-+
T Consensus 373 ~iPVIg--~GGI~s~~DA~e~l-~aGAd~Vqi 401 (443)
T 1tv5_A 373 QIPIIA--SGGIFSGLDALEKI-EAGASVCQL 401 (443)
T ss_dssp CSCEEE--ESSCCSHHHHHHHH-HTTEEEEEE
T ss_pred CCcEEE--ECCCCCHHHHHHHH-HcCCCEEEE
Confidence 899886 33455555555555 589999987
No 190
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.76 E-value=8.5e-07 Score=90.21 Aligned_cols=158 Identities=14% Similarity=0.156 Sum_probs=112.6
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhh-c-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEK-A-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~-a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
.+..+-.+-++.+|....++++.+ + |-+.|-|-+..-+.. +..|+....+..+.+.+. ++.++.-+.++
T Consensus 75 ~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~--------llpD~~~tv~aa~~L~~~-Gf~Vlpy~~dd 145 (265)
T 1wv2_A 75 TILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKT--------LFPNVVETLKAAEQLVKD-GFDVMVYTSDD 145 (265)
T ss_dssp EEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTT--------CCBCHHHHHHHHHHHHTT-TCEEEEEECSC
T ss_pred EECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccc--------cCcCHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 345555545789999999999887 5 578999976432211 236777777777777654 56666556665
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccC-CCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYG-GVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~g-G~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
..+++++++.|++.|....... + .| |++ ..++|+.+++.. ++|||.
T Consensus 146 ----~~~akrl~~~G~~aVmPlg~pI---------------G------sG~Gi~-------~~~lI~~I~e~~-~vPVI~ 192 (265)
T 1wv2_A 146 ----PIIARQLAEIGCIAVMPLAGLI---------------G------SGLGIC-------NPYNLRIILEEA-KVPVLV 192 (265)
T ss_dssp ----HHHHHHHHHSCCSEEEECSSST---------------T------CCCCCS-------CHHHHHHHHHHC-SSCBEE
T ss_pred ----HHHHHHHHHhCCCEEEeCCccC---------------C------CCCCcC-------CHHHHHHHHhcC-CCCEEE
Confidence 5779999999999996622211 0 11 222 267788888875 799999
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHH
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQ 764 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~ 764 (842)
.|||.|++|+.+++++||++|+|+|++... .| .+.+.+++.++
T Consensus 193 eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 193 DAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIV 237 (265)
T ss_dssp ESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999842 23 34445554443
No 191
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.74 E-value=1.7e-07 Score=98.03 Aligned_cols=153 Identities=20% Similarity=0.191 Sum_probs=103.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhh-CCccE-------
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS-VKIPF------- 635 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~-~~~Pv------- 635 (842)
.|+++.=.. .+.++..++. ++|||++-+. ..+..+|+.+.++.+..... ..+.+
T Consensus 76 iPvi~~Ggi-~~~~~~~~~~----~~Gad~V~lg-------------~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g 137 (252)
T 1ka9_F 76 IPLTVGGGV-RSLEDARKLL----LSGADKVSVN-------------SAAVRRPELIRELADHFGAQAVVLAIDARWRGD 137 (252)
T ss_dssp SCEEEESSC-CSHHHHHHHH----HHTCSEEEEC-------------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETT
T ss_pred CCEEEECCc-CCHHHHHHHH----HcCCCEEEEC-------------hHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCC
Confidence 688875422 2454443333 3599999883 22235667777777766421 11222
Q ss_pred --EEEecCC----hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 636 --FVKLTPN----ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 636 --~vKl~p~----~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
.|++... ..+..+.++.+.+.|++.|+++++.. .|..+|. .++.+++
T Consensus 138 ~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~----------------------~g~~~g~-----~~~~i~~ 190 (252)
T 1ka9_F 138 FPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDR----------------------DGTKEGY-----DLRLTRM 190 (252)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTT----------------------TTTCSCC-----CHHHHHH
T ss_pred CEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccC----------------------CCCcCCC-----CHHHHHH
Confidence 2333211 12567889999999999999864311 1222332 2888999
Q ss_pred HHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 710 IAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 710 i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+++.+ ++|||++|||.+++|+.+++.+||++|+++|+++ .+++-+.++++.+
T Consensus 191 l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~-~~~~~~~~~~~~l 242 (252)
T 1ka9_F 191 VAEAV-GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFH-FGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH-TTSSCHHHHHHHH
T ss_pred HHHHc-CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHH-cCCCCHHHHHHHH
Confidence 99988 7999999999999999999999999999999999 4566676665544
No 192
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.73 E-value=3.1e-07 Score=94.85 Aligned_cols=171 Identities=12% Similarity=0.093 Sum_probs=108.0
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCC--HHHHHHHHHHHHhhCCccEEEEecC---Ch------
Q psy16199 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQD--PEMVRNISLWVRSSVKIPFFVKLTP---NI------ 643 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~--~~~~~~ii~~v~~~~~~Pv~vKl~p---~~------ 643 (842)
..++..+.++.+.+.|.|+|.+- | .+-. .+.+.++++++|+.+++|+++|..| +.
T Consensus 51 ~~~~~~~~~~~~~~sGtDai~VG-S-------------~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i~~~ 116 (286)
T 3vk5_A 51 PVTEAVEKAAELTRLGFAAVLLA-S-------------TDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVVRG 116 (286)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE-C-------------SCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCCCTT
T ss_pred CcHHHHHHHHHHHhcCCCEEEEc-c-------------CCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccccccC
Confidence 35677778888888899999995 2 2245 6889999999999999999999983 21
Q ss_pred ------------hcHHHHHHH---------H----HHCCCC----EEEEecCC-CccccCCCCCCCCCccc----CCCcc
Q psy16199 644 ------------TNITDIAKA---------A----YEGKAD----GVSAINTV-SGLMSLSADGNPWPAVG----TKKLT 689 (842)
Q Consensus 644 ------------~~~~~~a~~---------~----~~~G~d----~i~v~nt~-~~~~~~~~~~~~~p~~~----~~~~~ 689 (842)
.+..-+... + ++.| . |-.+.|.- .+..++......-|.+. .....
T Consensus 117 aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~g 195 (286)
T 3vk5_A 117 ADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVA 195 (286)
T ss_dssp CSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHH
Confidence 122222222 3 4555 2 11122221 11111110000111110 00000
Q ss_pred ccCC-----CCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccC-chhHHHHHH
Q psy16199 690 TYGG-----VSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQD-FTVVDDYIT 761 (842)
Q Consensus 690 ~~gG-----~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~g-p~~~~~i~~ 761 (842)
..-| +.+.. ++...++|+++++.++ ++||+..|||+|.+|+.+++.+|||.|.|+|+++.++ |.+++++.+
T Consensus 196 ad~G~~lV~LD~~~-~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~e~a~ 273 (286)
T 3vk5_A 196 RAFGFHMVYLYSRN-EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEIAG 273 (286)
T ss_dssp HHTTCSEEEEECSS-SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHHHHHC
T ss_pred HHcCCCEEEEcCCC-CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHHHHHH
Confidence 0101 12222 7778899999999984 6999999999999999999999999999999999543 566666653
No 193
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.71 E-value=1.9e-07 Score=98.21 Aligned_cols=195 Identities=20% Similarity=0.170 Sum_probs=120.3
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEec--cCCCCCCCCCCcccC----------CCCHHHHHHHHHHHHhh
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNL--SCPHGMGERGMGLAC----------GQDPEMVRNISLWVRSS 630 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~--scP~~~~~~~~G~~~----------~~~~~~~~~ii~~v~~~ 630 (842)
+.+|.-++.|+ +.+.+.+.++.++++ +|+|||.+ |-|-. + |..+ |-+.+.+.++++++|+.
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~a----d-Gp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~ 89 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLG----D-GPVIQRASELALRKGMSVQGALELVREVRAL 89 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC---------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCccc----c-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 45777787775 467899999999998 99999975 33311 0 1000 24556678999999999
Q ss_pred CCccEEEE--ecC-ChhcHHHHHHHHHHCCCCEEEEecCCCccc----------cCC----C-CCCC---CCcccC--CC
Q psy16199 631 VKIPFFVK--LTP-NITNITDIAKAAYEGKADGVSAINTVSGLM----------SLS----A-DGNP---WPAVGT--KK 687 (842)
Q Consensus 631 ~~~Pv~vK--l~p-~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~----------~~~----~-~~~~---~p~~~~--~~ 687 (842)
+++||++= ..| .......+++.+.++|+||+++-.-..... +++ + .++. ...+.. .+
T Consensus 90 ~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~g 169 (271)
T 1ujp_A 90 TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATG 169 (271)
T ss_dssp CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCS
T ss_pred CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCC
Confidence 99999982 121 111567889999999999988743211100 000 0 0000 000000 00
Q ss_pred ---ccccCCCCCCc--cccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCc--hhHHHHH
Q psy16199 688 ---LTTYGGVSGNA--TRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF--TVVDDYI 760 (842)
Q Consensus 688 ---~~~~gG~sG~~--~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp--~~~~~i~ 760 (842)
....-|+.|.. ..+...++++++++.. ++||+..|||+|++++.++ .|||+|.|||++....- ..+.++.
T Consensus 170 fiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~~~~~~~fv 246 (271)
T 1ujp_A 170 FVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRALEEGRSLAPLL 246 (271)
T ss_dssp CEEEECC------------CCHHHHHHHHTTC-CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHHHTTCCHHHHH
T ss_pred CEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcccchHHHHHHHH
Confidence 00112233332 1223367899999987 7999999999999999996 99999999999995321 1567777
Q ss_pred HHHHHHH
Q psy16199 761 TGLQTLL 767 (842)
Q Consensus 761 ~~l~~~m 767 (842)
+.|+..+
T Consensus 247 ~~l~~~~ 253 (271)
T 1ujp_A 247 QEIRQGL 253 (271)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776655
No 194
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.71 E-value=1.2e-07 Score=97.20 Aligned_cols=125 Identities=13% Similarity=0.231 Sum_probs=87.9
Q ss_pred HHhhcCcCEEEEeccCCCCCCCCCCcccCCCCH-HHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHHCCCCEEE
Q psy16199 585 KTEKAGADALELNLSCPHGMGERGMGLACGQDP-EMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYEGKADGVS 662 (842)
Q Consensus 585 ~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~-~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~ 662 (842)
.+.++|+|.|.++...- .+| +.+.++++++++.. ++++++.+. ...+ +..+.+.|+|.|.
T Consensus 83 ~~~~~Gad~v~l~~~~~-------------~~p~~~~~~~i~~~~~~~~~~~v~~~~~----t~~e-~~~~~~~G~d~i~ 144 (223)
T 1y0e_A 83 ELIESQCEVIALDATLQ-------------QRPKETLDELVSYIRTHAPNVEIMADIA----TVEE-AKNAARLGFDYIG 144 (223)
T ss_dssp HHHHHTCSEEEEECSCS-------------CCSSSCHHHHHHHHHHHCTTSEEEEECS----SHHH-HHHHHHTTCSEEE
T ss_pred HHHhCCCCEEEEeeecc-------------cCcccCHHHHHHHHHHhCCCceEEecCC----CHHH-HHHHHHcCCCEEE
Confidence 34457999999975431 112 34567888888875 677877553 2233 6678999999987
Q ss_pred EecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEE
Q psy16199 663 AINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742 (842)
Q Consensus 663 v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~V 742 (842)
++|..... ...+.. ..+..++.++++++.+ ++||++.|||.|++|+.+++++||++|
T Consensus 145 ~~~~g~t~------------------~~~~~~----~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v 201 (223)
T 1y0e_A 145 TTLHGYTS------------------YTQGQL----LYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCS 201 (223)
T ss_dssp CTTTTSST------------------TSTTCC----TTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred eCCCcCcC------------------CCCCCC----CCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEE
Confidence 64421100 000100 0233478889999888 799999999999999999999999999
Q ss_pred EEehhhhc
Q psy16199 743 QICSAVQN 750 (842)
Q Consensus 743 qv~ta~l~ 750 (842)
+++|+++.
T Consensus 202 ~vG~al~~ 209 (223)
T 1y0e_A 202 VVGGAITR 209 (223)
T ss_dssp EECHHHHC
T ss_pred EEChHHcC
Confidence 99999873
No 195
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.69 E-value=4.1e-08 Score=114.07 Aligned_cols=156 Identities=15% Similarity=0.105 Sum_probs=106.7
Q ss_pred HHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEec------------------
Q psy16199 579 WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLT------------------ 640 (842)
Q Consensus 579 ~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~------------------ 640 (842)
..+.++.+.++|||.|.||..|-..+.+..-+.....+++++.++.+..-+. .+-+.+...
T Consensus 349 ~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~-~ivv~iD~~~~~~~~~~~~~~~~~~~~ 427 (555)
T 1jvn_A 349 ALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQ-AVVISVDPKRVYVNSQADTKNKVFETE 427 (555)
T ss_dssp HHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGG-GEEEEECEEEEEESSGGGCSSCCEECS
T ss_pred HHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCC-cEEEEEEcccccccccccccccccccc
Confidence 4455566666799999999876310000000001136788888888765321 122222111
Q ss_pred ---CC-------------h-----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcc
Q psy16199 641 ---PN-------------I-----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT 699 (842)
Q Consensus 641 ---p~-------------~-----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~ 699 (842)
++ + .+..++++.+++.|++.|+++.. +.-|-++|.
T Consensus 428 ~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~----------------------~~dG~~~G~-- 483 (555)
T 1jvn_A 428 YPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCI----------------------DKDGSNSGY-- 483 (555)
T ss_dssp SCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCG----------------------GGTTTCSCC--
T ss_pred ccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCC----------------------CCCCCCCCC--
Confidence 00 1 14779999999999999988432 223445553
Q ss_pred ccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHH-hCCCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 700 RPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQ-AGAHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 700 ~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~-~GA~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
.+++++++++.+ ++|||++|||.|.+|+.++++ +||++|+++|+++ .+++.+.++++.++
T Consensus 484 ---d~~li~~l~~~~-~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~-~~~~~~~e~~~~l~ 544 (555)
T 1jvn_A 484 ---DLELIEHVKDAV-KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFH-RGEFTVNDVKEYLL 544 (555)
T ss_dssp ---CHHHHHHHHHHC-SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHH-TTSCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHhC-CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHH-cCCCCHHHHHHHHH
Confidence 289999999998 799999999999999999998 8999999999998 56888888766443
No 196
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.67 E-value=2.1e-07 Score=94.70 Aligned_cols=166 Identities=17% Similarity=0.199 Sum_probs=107.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+++||. +.+.+++.+.++.+.+.|+|+|++...+|.. .+.++.+++..++|+++......
T Consensus 7 ~~i~~~i~-~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~-----------------~~~i~~i~~~~~~~l~vg~g~~~ 68 (212)
T 2v82_A 7 LPLIAILR-GITPDEALAHVGAVIDAGFDAVEIPLNSPQW-----------------EQSIPAIVDAYGDKALIGAGTVL 68 (212)
T ss_dssp SCEEEECT-TCCHHHHHHHHHHHHHHTCCEEEEETTSTTH-----------------HHHHHHHHHHHTTTSEEEEECCC
T ss_pred CCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-----------------HHHHHHHHHhCCCCeEEEecccc
Confidence 68999997 5789999999999999999999998765421 13455555556778888543322
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCc-ccCCCc-----cccCCCCCCccc---cchHHHHHHHHhhC
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPA-VGTKKL-----TTYGGVSGNATR---PMGLKAVSSIAKMF 714 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~-~~~~~~-----~~~gG~sG~~~~---p~al~~v~~i~~~~ 714 (842)
+ .+.++.+.++|+|+|.+.++...... .....+.+. ++.+.. ....|.+.-.++ +..++.++++++.+
T Consensus 69 -~-~~~i~~a~~~Gad~V~~~~~~~~~~~-~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~ 145 (212)
T 2v82_A 69 -K-PEQVDALARMGCQLIVTPNIHSEVIR-RAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVL 145 (212)
T ss_dssp -S-HHHHHHHHHTTCCEEECSSCCHHHHH-HHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTS
T ss_pred -C-HHHHHHHHHcCCCEEEeCCCCHHHHH-HHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhc
Confidence 2 23578888999999975432110000 000000000 000000 001121111112 34578888888887
Q ss_pred C-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 715 P-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 715 ~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+ ++||++.|||. .+++.+++.+||++|.++|+++..
T Consensus 146 ~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 146 PSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp CTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred cCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 5 59999999996 999999999999999999999853
No 197
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.58 E-value=3.9e-07 Score=96.44 Aligned_cols=156 Identities=15% Similarity=0.137 Sum_probs=102.8
Q ss_pred cceEEEeccCCC----H--hHHHHHHHHHhhcCcCEE--EEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccE
Q psy16199 564 SILIASIMCTYN----K--DDWLELSKKTEKAGADAL--ELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635 (842)
Q Consensus 564 ~pvi~si~~g~~----~--e~~~~~a~~~~~agaD~i--elN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv 635 (842)
.|+++++..+.+ . +.+.+.++.+.++|+|.| .+|.+|+.. ....+.+.++++..++ .++|+
T Consensus 80 ~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~----------~~~~~~~~~v~~~~~~-~g~~v 148 (273)
T 2qjg_A 80 VGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDED----------WEAYRDLGMIAETCEY-WGMPL 148 (273)
T ss_dssp CEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEETSTTH----------HHHHHHHHHHHHHHHH-HTCCE
T ss_pred CCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecCCCCH----------HHHHHHHHHHHHHHHH-cCCCE
Confidence 578888765432 1 223444555666799999 777776521 0112334444444443 47999
Q ss_pred EEEecC---------ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHH
Q psy16199 636 FVKLTP---------NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKA 706 (842)
Q Consensus 636 ~vKl~p---------~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~ 706 (842)
++.+.+ +..++.+.++.+.+.|+|.|.+++ +..++.
T Consensus 149 iv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~-----------------------------------~~~~~~ 193 (273)
T 2qjg_A 149 IAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY-----------------------------------TGDIDS 193 (273)
T ss_dssp EEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC-----------------------------------CSSHHH
T ss_pred EEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC-----------------------------------CCCHHH
Confidence 998621 123456677999999999888731 012778
Q ss_pred HHHHHhhCCCCcEEEecCcCC--HHHH----HHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHHH
Q psy16199 707 VSSIAKMFPNFPILGIGGIDS--ADVA----LQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLY 768 (842)
Q Consensus 707 v~~i~~~~~~ipIi~~GGI~t--~~da----~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m~ 768 (842)
++++++.+ ++||++.|||.+ .+|+ .+++.+||++|.++|+++.. ++. .+..+.+.+.+.
T Consensus 194 l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~-~~~-~~~~~~l~~~~~ 258 (273)
T 2qjg_A 194 FRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQH-DDV-VGITRAVCKIVH 258 (273)
T ss_dssp HHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTS-SSH-HHHHHHHHHHHH
T ss_pred HHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCC-CCH-HHHHHHHHHHHh
Confidence 88888887 799999999995 8884 44557999999999999954 543 344445554443
No 198
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.57 E-value=5.3e-07 Score=93.13 Aligned_cols=124 Identities=10% Similarity=0.115 Sum_probs=86.3
Q ss_pred HHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChhcHHHHHHHHHHCCCCEE
Q psy16199 583 SKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNITNITDIAKAAYEGKADGV 661 (842)
Q Consensus 583 a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i 661 (842)
++.+.++|||.|.++...-..+ .+ +.+.++++.+++.. ++++++.+.. . +-++.+.+.|+|.|
T Consensus 94 i~~~~~~Gad~V~l~~~~~~~~--~~---------~~~~~~i~~i~~~~~~~~v~~~~~t----~-~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 94 VDQLAALNIAVIAMDCTKRDRH--DG---------LDIASFIRQVKEKYPNQLLMADIST----F-DEGLVAHQAGIDFV 157 (234)
T ss_dssp HHHHHTTTCSEEEEECCSSCCT--TC---------CCHHHHHHHHHHHCTTCEEEEECSS----H-HHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEEcccccCCC--CC---------ccHHHHHHHHHHhCCCCeEEEeCCC----H-HHHHHHHHcCCCEE
Confidence 4455667999999986431100 00 13467888888776 6788876542 2 23788899999998
Q ss_pred --EEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCC
Q psy16199 662 --SAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGA 739 (842)
Q Consensus 662 --~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA 739 (842)
.+.....+ ..++. +..++.++++++. ++||+++|||.|.+|+.+++.+||
T Consensus 158 ~~~v~g~~~~---------------------~~~~~-----~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Ga 209 (234)
T 1yxy_A 158 GTTLSGYTPY---------------------SRQEA-----GPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGV 209 (234)
T ss_dssp ECTTTTSSTT---------------------SCCSS-----SCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCC
T ss_pred eeeccccCCC---------------------CcCCC-----CCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCC
Confidence 33211000 00111 2237778888776 699999999999999999999999
Q ss_pred CEEEEehhhhc
Q psy16199 740 HAVQICSAVQN 750 (842)
Q Consensus 740 ~~Vqv~ta~l~ 750 (842)
++|++||+++.
T Consensus 210 d~v~vGsal~~ 220 (234)
T 1yxy_A 210 AGIVVGGAITR 220 (234)
T ss_dssp SEEEECHHHHC
T ss_pred CEEEEchHHhC
Confidence 99999999984
No 199
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.56 E-value=2.5e-07 Score=96.08 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=97.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccE-----EEE
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF-----FVK 638 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv-----~vK 638 (842)
.|++++=.. .+.++..++. +.|||.+-+. ..+..+|+.+.++ +...+..-+.+ .|+
T Consensus 74 ipvi~~Ggi-~~~~~~~~~~----~~Gad~V~lg-------------~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~ 134 (241)
T 1qo2_A 74 EHIQIGGGI-RSLDYAEKLR----KLGYRRQIVS-------------SKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVA 134 (241)
T ss_dssp GGEEEESSC-CSHHHHHHHH----HTTCCEEEEC-------------HHHHHCTTHHHHH-HTTTCEEEEEEEEETTEEC
T ss_pred CcEEEECCC-CCHHHHHHHH----HCCCCEEEEC-------------chHhhChHHHHHH-HHcCCcEEEEEEecCCEEE
Confidence 687765321 3445444433 3599999773 2223455555555 44321111112 222
Q ss_pred ecCCh----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 639 LTPNI----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 639 l~p~~----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
+..-. .+..++++.+++.|++.|.++++.. .|.++|. .++.++++++.+
T Consensus 135 ~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~----------------------~g~~~g~-----~~~~i~~l~~~~ 187 (241)
T 1qo2_A 135 FKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEK----------------------DGTLQEH-----DFSLTKKIAIEA 187 (241)
T ss_dssp CTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTH----------------------HHHTCCC-----CHHHHHHHHHHH
T ss_pred ECCceecCCCCHHHHHHHHHhCCCCEEEEEeecc----------------------cccCCcC-----CHHHHHHHHHhc
Confidence 21100 1567889999999999999976521 1222332 288899999987
Q ss_pred CCCcEEEecCcCCHHHHHHHHHh-----C-CCEEEEehhhhccCchhHHHHHH
Q psy16199 715 PNFPILGIGGIDSADVALQFIQA-----G-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~-----G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
++|||++|||.+++|+.+++.+ | |++|+|+|+++. ++.-+.++++
T Consensus 188 -~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~-~~~~~~~~~~ 238 (241)
T 1qo2_A 188 -EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLE-GILTVEVMKR 238 (241)
T ss_dssp -TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHT-TSSCHHHHHH
T ss_pred -CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHc-CCCCHHHHHH
Confidence 7999999999999999999998 9 999999999994 4554555443
No 200
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.56 E-value=3.5e-07 Score=104.90 Aligned_cols=162 Identities=17% Similarity=0.190 Sum_probs=112.5
Q ss_pred HHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCC
Q psy16199 580 LELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKAD 659 (842)
Q Consensus 580 ~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d 659 (842)
.+.+.++.++|+|.+.+.- . . .....+.+.++++++..++|+++|-..+. +-++.+. |+|
T Consensus 230 ~~~a~~l~~~gvd~lvvdt-----a--~-------G~~~~~L~~I~~l~~~~~vpvi~k~v~~~----~~a~~l~--G~d 289 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDT-----A--H-------AHNLKAIKSMKEMRQKVDADFIVGNIANP----KAVDDLT--FAD 289 (486)
T ss_dssp HHHHHHHHHTTCSEEEEEC-----S--C-------CCCHHHHHHHHHHHHTCCSEEEEEEECCH----HHHTTCT--TSS
T ss_pred HHHHHHHHHhcCCceEEEe-----c--C-------CcEeehhhHHHHHHHHhCCccccCCcCCH----HHHHHhh--CCC
Confidence 4456667778999987752 1 1 12244567788899988999999976642 3345555 999
Q ss_pred EEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCC
Q psy16199 660 GVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGA 739 (842)
Q Consensus 660 ~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA 739 (842)
+|.+ +. ++.. +-. .+ ...|...+ ...++..+.++.+.+ ++|||+.|||.++.|+.++|++||
T Consensus 290 ~v~v-g~-g~g~-~~~-----------~r-~~~~~g~~--~~~~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA 351 (486)
T 2cu0_A 290 AVKV-GI-GPGS-ICT-----------TR-IVAGVGVP--QITAVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGA 351 (486)
T ss_dssp EEEE-CS-SCST-TBC-----------HH-HHTCCCCC--HHHHHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTC
T ss_pred eEEE-ee-eecc-cee-----------ee-EEeecCcc--hHHHHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCC
Confidence 9999 32 2110 000 00 01122222 224566667777766 799999999999999999999999
Q ss_pred CEEEEehhhhc-------------------------------------------------cC-----------chhHHHH
Q psy16199 740 HAVQICSAVQN-------------------------------------------------QD-----------FTVVDDY 759 (842)
Q Consensus 740 ~~Vqv~ta~l~-------------------------------------------------~g-----------p~~~~~i 759 (842)
++||+||.|+. +| ..++..+
T Consensus 352 ~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 431 (486)
T 2cu0_A 352 DAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQL 431 (486)
T ss_dssp SEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHH
T ss_pred CceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccceEEeecccCCHHHHHHHH
Confidence 99999999982 12 1367788
Q ss_pred HHHHHHHHHhcCC-CccccCC
Q psy16199 760 ITGLQTLLYLKST-QLKGWDG 779 (842)
Q Consensus 760 ~~~l~~~m~~~g~-~i~~~~~ 779 (842)
..+|+.-|...|+ ++.++..
T Consensus 432 ~~~lr~~m~~~G~~~~~~l~~ 452 (486)
T 2cu0_A 432 VGGLKAGMGYVGARNIRELKE 452 (486)
T ss_dssp HHHHHHHHHHTTCSBHHHHHH
T ss_pred HHHHHHhcccCCcCCHHHHHh
Confidence 8999999999999 9988864
No 201
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.55 E-value=2.1e-06 Score=87.08 Aligned_cols=155 Identities=22% Similarity=0.219 Sum_probs=100.9
Q ss_pred HHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh------------------
Q psy16199 583 SKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT------------------ 644 (842)
Q Consensus 583 a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~------------------ 644 (842)
++.+.+.|+|+|++-. +.+-..+.+.++++.+++ +++|+++ .+.+.+
T Consensus 24 ~~~~~~~GtD~i~vGG-------------s~gvt~~~~~~~v~~ik~-~~~Pvvl-fp~~~~~v~~gaD~~l~pslln~~ 88 (228)
T 3vzx_A 24 LEILCESGTDAVIIGG-------------SDGVTEDNVLRMMSKVRR-FLVPCVL-EVSAIEAIVPGFDLYFIPSVLNSK 88 (228)
T ss_dssp HHHHHTSSCSEEEECC-------------CSCCCHHHHHHHHHHHTT-SSSCEEE-ECSCGGGCCSCCSEEEEEEETTBS
T ss_pred HHHHHHcCCCEEEECC-------------cCCCCHHHHHHHHHHhhc-cCCCEEE-eCCCHHHccccCCEEEEeeecCCC
Confidence 3344577999999942 334568999999999998 8999998 432221
Q ss_pred c----HHHHHHHHHHCCC-----CEEE----EecCCCccccCC-CCCC----------------CCCcccCCCccccCCC
Q psy16199 645 N----ITDIAKAAYEGKA-----DGVS----AINTVSGLMSLS-ADGN----------------PWPAVGTKKLTTYGGV 694 (842)
Q Consensus 645 ~----~~~~a~~~~~~G~-----d~i~----v~nt~~~~~~~~-~~~~----------------~~p~~~~~~~~~~gG~ 694 (842)
+ +....+.+++.|. .-|. +.|.......+. .+.. +.+.+. .-+
T Consensus 89 ~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VY------ld~- 161 (228)
T 3vzx_A 89 NADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFY------LEY- 161 (228)
T ss_dssp SGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEE------EEC-
T ss_pred CcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEE------ecC-
Confidence 1 1222344555554 3333 344322110000 0000 011111 011
Q ss_pred CCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 695 SGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 695 sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
||.. ...++++++++.+.++||+..|||+|++++.+++ .|||.|.+||++.. +|.++.++.+.++
T Consensus 162 sG~~---~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~-~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 162 SGVL---GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE-DFDRALKTVAAVK 226 (228)
T ss_dssp TTSC---CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH-CHHHHHHHHHHHH
T ss_pred CCCc---CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc-CHHHHHHHHHHHh
Confidence 4532 2589999999987459999999999999999988 79999999999994 6999999988765
No 202
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.51 E-value=4.8e-07 Score=118.03 Aligned_cols=174 Identities=11% Similarity=0.132 Sum_probs=118.7
Q ss_pred cceEEEeccCCCHhH---HHHHHHHHhhcCcCE--EEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEE
Q psy16199 564 SILIASIMCTYNKDD---WLELSKKTEKAGADA--LELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK 638 (842)
Q Consensus 564 ~pvi~si~~g~~~e~---~~~~a~~~~~agaD~--ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vK 638 (842)
.|+.++++. .++.. +.++.+.+.+.|++. |.+..+.|. .+ ++++.+++ .+++++ +
T Consensus 638 ~p~gvN~~~-~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~--------------~e---~~~~~l~~-~gi~~i-~ 697 (2060)
T 2uva_G 638 RGITVNLIY-VNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS--------------IE---VANEYIQT-LGIRHI-S 697 (2060)
T ss_dssp CCEEEEEET-TCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC--------------HH---HHHHHHHH-SCCSEE-E
T ss_pred CCeEecccc-cCcccchhHHHHHHHHHHcCCCcceEeecCCCCC--------------HH---HHHHHHHH-cCCeEE-E
Confidence 799999975 34432 457777777889998 888776652 22 23444443 388888 4
Q ss_pred ecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCC-CccccchHHHHHHHHhhCCCC
Q psy16199 639 LTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG-NATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 639 l~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG-~~~~p~al~~v~~i~~~~~~i 717 (842)
+.++..+..+.+.++.++|+|+|++.|-.+. ..||+.| ..+....+..+.++++.+ ++
T Consensus 698 ~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~--------------------eaGGH~g~~d~~~~~l~lv~~i~~~~-~i 756 (2060)
T 2uva_G 698 FKPGSVDAIQQVINIAKANPTFPIILQWTGG--------------------RGGGHHSFEDFHQPILLMYSRIRKCS-NI 756 (2060)
T ss_dssp ECCCSHHHHHHHHHHHHHCTTSCEEEEECCT--------------------TSSSSCCSCCSHHHHHHHHHHHHTST-TE
T ss_pred ecCCHHHHHHHHHHHHHcCCCEEEEeeeEcc--------------------cCCCCCCcccccchHHHHHHHHHHHc-CC
Confidence 5555667677777789999999995443221 2455555 223345578999999988 79
Q ss_pred cEEEecCcCCHHHHHHHH-----------HhCCCEEEEehhhhccC-chhHHHHHHHHHHHHHhcCCCccccCCCC
Q psy16199 718 PILGIGGIDSADVALQFI-----------QAGAHAVQICSAVQNQD-FTVVDDYITGLQTLLYLKSTQLKGWDGQS 781 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l-----------~~GA~~Vqv~ta~l~~g-p~~~~~i~~~l~~~m~~~g~~i~~~~~~~ 781 (842)
|||+.|||.+++|+.++| ++||++|||||.|+.-- -..-...++. ++...+.+.++|.+.+
T Consensus 757 pviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~K~~---lv~a~~~dt~~w~~~~ 829 (2060)
T 2uva_G 757 VLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQAKQA---IVDAPGVDDDQWENTY 829 (2060)
T ss_dssp EEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHHHHH---HHTSCCCCSTTSGGGG
T ss_pred CEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHHHHH---HHhCCcccccchhccc
Confidence 999999999999999999 99999999999999432 1111222222 2233333667787654
No 203
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.51 E-value=3.1e-07 Score=94.23 Aligned_cols=157 Identities=25% Similarity=0.235 Sum_probs=102.9
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe--------------cC
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL--------------TP 641 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl--------------~p 641 (842)
.+.-.++++.+.++|+|+||+..| .+-+.+.+.++++++|+ .++|+++=. .|
T Consensus 19 ~~~t~~~~~~l~~~GaD~ielG~S-------------~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiP 84 (240)
T 1viz_A 19 KDLPDEQLEILCESGTDAVIIGGS-------------DGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIP 84 (240)
T ss_dssp SCCCHHHHHHHHTSCCSEEEECC-----------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEE
T ss_pred ccccHHHHHHHHHcCCCEEEECCC-------------CCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEc
Confidence 334455577788889999999773 23678889999999998 899999721 12
Q ss_pred Chh--cHHHH-----HHHHHHCC-----CCEEE----EecCCCccccC---CCCCC--------------CCCcccCCCc
Q psy16199 642 NIT--NITDI-----AKAAYEGK-----ADGVS----AINTVSGLMSL---SADGN--------------PWPAVGTKKL 688 (842)
Q Consensus 642 ~~~--~~~~~-----a~~~~~~G-----~d~i~----v~nt~~~~~~~---~~~~~--------------~~p~~~~~~~ 688 (842)
++. +-.++ ..++.+.| .+-|- +.|.......+ +.+.+ ....+.
T Consensus 85 dLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VY---- 160 (240)
T 1viz_A 85 SVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFY---- 160 (240)
T ss_dssp EETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEE----
T ss_pred ccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEE----
Confidence 221 12233 46678888 77665 65432210000 00000 000110
Q ss_pred cccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCch-hHHH
Q psy16199 689 TTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFT-VVDD 758 (842)
Q Consensus 689 ~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~-~~~~ 758 (842)
.-+ +|. +...++++++++.+.++|++..|||+|++++.+++. |||.|.|||+++. .|. ++++
T Consensus 161 --l~s-~G~---~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~-~~~~~~~~ 223 (240)
T 1viz_A 161 --LEY-SGV---LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE-DFDRALKT 223 (240)
T ss_dssp --EEC-TTS---CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH-CHHHHHTH
T ss_pred --EeC-CCc---cChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh-CHHHHHHH
Confidence 011 342 446889999999874699999999999999999888 9999999999995 477 7777
No 204
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.50 E-value=3.4e-07 Score=94.37 Aligned_cols=183 Identities=16% Similarity=0.143 Sum_probs=110.5
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEec--cCCCCCCCC---CCc--ccCCCCHHHHHHHHHHHHhhCCccE
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNL--SCPHGMGER---GMG--LACGQDPEMVRNISLWVRSSVKIPF 635 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~--scP~~~~~~---~~G--~~~~~~~~~~~~ii~~v~~~~~~Pv 635 (842)
+.+|.-+++|+ +.+.+.++++.++++|||.|||.+ |-|-.-+.- ..- ..-+.+.+.+.++++.+|+. +|+
T Consensus 14 ~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~Pi 91 (252)
T 3tha_A 14 NANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KAL 91 (252)
T ss_dssp SEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SEE
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CCE
Confidence 56888888875 478999999999999999999986 455221100 000 00024567777777777754 798
Q ss_pred EEEe--cCChh-cHHHHHHHHHHCCCCEEEEecCCCcc----------ccCC-----CCCC---CCCcccCCC-----cc
Q psy16199 636 FVKL--TPNIT-NITDIAKAAYEGKADGVSAINTVSGL----------MSLS-----ADGN---PWPAVGTKK-----LT 689 (842)
Q Consensus 636 ~vKl--~p~~~-~~~~~a~~~~~~G~d~i~v~nt~~~~----------~~~~-----~~~~---~~p~~~~~~-----~~ 689 (842)
++=. +|-+. .+.++++.+.++|+||+++-.-.... .+++ ..++ +...+.... ..
T Consensus 92 vlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~V 171 (252)
T 3tha_A 92 VFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLL 171 (252)
T ss_dssp EEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEE
T ss_pred EEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 7733 33112 46778888888888887763210000 0000 0000 000000000 00
Q ss_pred ccCCCCCCcc--ccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 690 TYGGVSGNAT--RPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 690 ~~gG~sG~~~--~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
..-|..|... .+...++++++++.. ++||+..+||++++++.++.. +||+|-|||+++.
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 0112334321 112356788888886 799999999999999987765 6999999999983
No 205
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.50 E-value=1.6e-06 Score=87.94 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=97.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe-cCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL-TPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl-~p~ 642 (842)
.|+.+.++.....+. .++.+.++|+|+|-++... ..+.+.++++++++. ++++++-+ ++
T Consensus 54 ~~i~~~~~~~~~~~~---~~~~~~~~Gad~v~v~~~~---------------~~~~~~~~~~~~~~~-g~~~~v~~~~~- 113 (211)
T 3f4w_A 54 KEVLADAKIMDGGHF---ESQLLFDAGADYVTVLGVT---------------DVLTIQSCIRAAKEA-GKQVVVDMICV- 113 (211)
T ss_dssp SEEEEEEEECSCHHH---HHHHHHHTTCSEEEEETTS---------------CHHHHHHHHHHHHHH-TCEEEEECTTC-
T ss_pred CEEEEEEEeccchHH---HHHHHHhcCCCEEEEeCCC---------------ChhHHHHHHHHHHHc-CCeEEEEecCC-
Confidence 688888765333332 3566667899999996321 135567777777765 66777643 33
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
.+..+.++.+.+.|+|.|.+.+.+.+. .. .+..++.++++++.++++||++.
T Consensus 114 -~t~~~~~~~~~~~g~d~i~v~~g~~g~-------------------~~--------~~~~~~~i~~l~~~~~~~~i~~~ 165 (211)
T 3f4w_A 114 -DDLPARVRLLEEAGADMLAVHTGTDQQ-------------------AA--------GRKPIDDLITMLKVRRKARIAVA 165 (211)
T ss_dssp -SSHHHHHHHHHHHTCCEEEEECCHHHH-------------------HT--------TCCSHHHHHHHHHHCSSCEEEEE
T ss_pred -CCHHHHHHHHHHcCCCEEEEcCCCccc-------------------cc--------CCCCHHHHHHHHHHcCCCcEEEE
Confidence 355677888999999998763211100 00 11237788899888767999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
|||+ ++++.+++.+||+.|.+||+++..
T Consensus 166 gGI~-~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 166 GGIS-SQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp SSCC-TTTHHHHHTTCCSEEEECHHHHTC
T ss_pred CCCC-HHHHHHHHHcCCCEEEECHHHcCC
Confidence 9995 999999999999999999999943
No 206
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.48 E-value=1.5e-07 Score=103.36 Aligned_cols=82 Identities=18% Similarity=0.147 Sum_probs=69.5
Q ss_pred cccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcceee
Q psy16199 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLN 424 (842)
Q Consensus 345 ~~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~n 424 (842)
..+|+++++|++|+||+++||++++.+++.+......|||++++||++.++.. +|++||+.+. ..+++|
T Consensus 34 ~~~L~v~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq~-GNp~PR~~~l----------~~~~iN 102 (354)
T 3tjx_A 34 SMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALRE-GNPTPRYQAL----------PLGSIN 102 (354)
T ss_dssp CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBC-CSCSCCEEEE----------TTEEEE
T ss_pred CCceeEEECCEEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCccccc-CCCCCeEEEc----------cccccc
Confidence 35799999999999999999999999999999999999999999999998876 8999999865 246788
Q ss_pred eEeecccchhhHH
Q psy16199 425 IELISEKTAFIFF 437 (842)
Q Consensus 425 ~e~~s~~~~~~~~ 437 (842)
..-++....+.|+
T Consensus 103 ~~G~~n~G~~~~~ 115 (354)
T 3tjx_A 103 SMGLPNNGFDFYL 115 (354)
T ss_dssp CCCCCBCCHHHHH
T ss_pred ccccCCHHHHHHH
Confidence 8444444444444
No 207
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.47 E-value=6.4e-06 Score=84.35 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=121.7
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEecc----CCCCCCCCCCcccCCCCHHHHHHHHHHHHhh--CCccEEEEe
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLS----CPHGMGERGMGLACGQDPEMVRNISLWVRSS--VKIPFFVKL 639 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~s----cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~--~~~Pv~vKl 639 (842)
+-.||.+ .+...+.+.+++++++|+|.+.+.+- .||.. + -+ ++++++|+. .++|+-+++
T Consensus 7 i~psil~-~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~----~------G~----~~v~~ir~~~~~~~~~dvhL 71 (228)
T 3ovp_A 7 IGPSILN-SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT----F------GH----PVVESLRKQLGQDPFFDMHM 71 (228)
T ss_dssp EEEBCTT-SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC----B------CH----HHHHHHHHHHCSSSCEEEEE
T ss_pred eeeehee-CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc----c------CH----HHHHHHHHhhCCCCcEEEEE
Confidence 5667764 57888889999999999999999542 56531 1 12 467777877 588999988
Q ss_pred cCChhcHHHHHHHHHHCCCCEEEEecCCCc--------------cccCCCCC-CCC----Cc---ccCC-CccccCCCCC
Q psy16199 640 TPNITNITDIAKAAYEGKADGVSAINTVSG--------------LMSLSADG-NPW----PA---VGTK-KLTTYGGVSG 696 (842)
Q Consensus 640 ~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~--------------~~~~~~~~-~~~----p~---~~~~-~~~~~gG~sG 696 (842)
..+ +...+++.+.++|+|.|+++--... ..++.+.. ++. +. ++.- -.+...|+.|
T Consensus 72 mv~--~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 72 MVS--KPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp ECS--CGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCS
T ss_pred EeC--CHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCC
Confidence 542 2223444455555555555431100 00111110 000 01 1000 0123457788
Q ss_pred CccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHHHHHHhc
Q psy16199 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQTLLYLK 770 (842)
Q Consensus 697 ~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~~~m~~~ 770 (842)
..-.|..++.++++++..++++|...||| +.+.+.+++.+|||.+-+||++... +| ..++++++.++.++...
T Consensus 150 q~f~~~~l~ki~~lr~~~~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 150 QKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp CCCCGGGHHHHHHHHHHCTTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHhcCCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHHHhhc
Confidence 77778889999999998767999999999 5899999999999999999999853 23 44677777777776543
No 208
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.43 E-value=3.3e-07 Score=92.59 Aligned_cols=161 Identities=17% Similarity=0.288 Sum_probs=103.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCC----------CCCCc---------------ccCCCCHH
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMG----------ERGMG---------------LACGQDPE 618 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~----------~~~~G---------------~~~~~~~~ 618 (842)
.|+|+.+- +.+.+++.+.++.+.+.|++.||+++.+|+... ..++| +.+...+.
T Consensus 13 ~~ii~vi~-~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~ 91 (207)
T 2yw3_A 13 SRLLPLLT-VRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAALEAGAAFLVSPG 91 (207)
T ss_dssp HCEEEEEC-CCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHHHHTCSEEEESS
T ss_pred CCEEEEEe-CCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC
Confidence 68888885 578899999999998889999999998884311 00111 11111111
Q ss_pred HHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCc
Q psy16199 619 MVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNA 698 (842)
Q Consensus 619 ~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~ 698 (842)
.-.+++++.++ .++|+++-+ .+..+ +..+.+.|+|.|.++ +. ...|
T Consensus 92 ~d~~v~~~~~~-~g~~~i~G~----~t~~e-~~~A~~~Gad~v~~f---pa-------------------~~~g------ 137 (207)
T 2yw3_A 92 LLEEVAALAQA-RGVPYLPGV----LTPTE-VERALALGLSALKFF---PA-------------------EPFQ------ 137 (207)
T ss_dssp CCHHHHHHHHH-HTCCEEEEE----CSHHH-HHHHHHTTCCEEEET---TT-------------------TTTT------
T ss_pred CCHHHHHHHHH-hCCCEEecC----CCHHH-HHHHHHCCCCEEEEe---cC-------------------cccc------
Confidence 11233333333 356655532 23334 355667889988771 10 0111
Q ss_pred cccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 699 TRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 699 ~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
.+..++.++..++++|+++.|||. .+++.+++.+||++|.++|+++..++ .++.+..++++
T Consensus 138 ----G~~~lk~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~~d~---~~i~~~a~~~~ 198 (207)
T 2yw3_A 138 ----GVRVLRAYAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQGNL---EAVRAKVRAAK 198 (207)
T ss_dssp ----HHHHHHHHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGSSCH---HHHHHHHHHHH
T ss_pred ----CHHHHHHHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhCCCH---HHHHHHHHHHH
Confidence 256788888888789999999996 79999999999999999999985223 33444444444
No 209
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.42 E-value=1.2e-06 Score=89.31 Aligned_cols=50 Identities=18% Similarity=0.253 Sum_probs=44.9
Q ss_pred cchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 701 PMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 701 p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+...++++++++.+.++|++..|||+|++++.+++. |||.|.+||+++..
T Consensus 175 ~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~ 224 (234)
T 2f6u_A 175 YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEK 224 (234)
T ss_dssp CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHH
T ss_pred cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhC
Confidence 446889999999875699999999999999999988 99999999999943
No 210
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.41 E-value=3.8e-06 Score=91.60 Aligned_cols=251 Identities=14% Similarity=0.146 Sum_probs=138.5
Q ss_pred ccceeeecccccCCCcccccCCCCCcHHHHHHhhhcCCceEEEEeeccCCCcccccCcceecccccccccCCCCcceeee
Q psy16199 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQGSFLNI 425 (842)
Q Consensus 346 ~~L~~~~~G~~~~nP~~~As~p~~~~~~~~~~a~~~G~g~vv~kt~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~n~ 425 (842)
.++++++.|++++||++.|++ +..+++..+.+.+.|+|.++++|++.++.. +++.||+.... ...+++|.
T Consensus 43 ~~l~~~i~g~~l~npi~~aag-~~~~~~~~~~~a~~G~g~i~~~~~~~~~~~-g~~~pr~~~~~--------~d~~~in~ 112 (336)
T 1f76_A 43 PAKPVNCMGLTFKNPLGLAAG-LDKDGECIDALGAMGFGSIEIGTVTPRPQP-GNDKPRLFRLV--------DAEGLINR 112 (336)
T ss_dssp CCCCEEETTEEESSSEEECTT-SSTTCCCHHHHHHTTCSEEEEEEECSSCBC-CSCSCCEEEET--------TTTEEEEC
T ss_pred CCCCeEECCEEcCCCcEeCcc-cCCcHHHHHHHHHcCccEEEeCCCCCCCCC-CCCCcceeecc--------ccceeeec
Confidence 578999999999999999975 566677778888999999999999987653 67889887542 24567777
Q ss_pred EeecccchhhHHhhhhcCCCCcchhhhHHHHHHhhccccccCCcccccCCCCCCCCC---ChhHHHHhhhhh-hCccccc
Q psy16199 426 ELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQIN---TPVETILSVKDV-IGQAVQR 501 (842)
Q Consensus 426 e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~dk~~~~---~~~~~~~~l~~~-~G~~~g~ 501 (842)
..++....+.++ +. +...+ ...|++++-+-.+. .+ ...+...+...+ -||.
T Consensus 113 ~g~~~~g~~~~~----------------~~-~~~~~----~~~~~~v~i~~~~~-~~i~~~~~~~~~aa~~~~~g~d--- 167 (336)
T 1f76_A 113 MGFNNLGVDNLV----------------EN-VKKAH----YDGVLGINIGKNKD-TPVEQGKDDYLICMEKIYAYAG--- 167 (336)
T ss_dssp CCCCBCCHHHHH----------------HH-HHHCC----CCSEEEEEECCCTT-SCGGGTHHHHHHHHHHHGGGCS---
T ss_pred CCCCCcCHHHHH----------------HH-HHhcc----cCCcEEEEecCCCC-CcccccHHHHHHHHHHHhccCC---
Confidence 333333333222 11 22222 12367765433331 11 112222222211 0220
Q ss_pred cccCccCCCcceeEeeccCCccccCCccccCCCc-cchhhhhcCcccccccccccccccc-cc---------ccceEEEe
Q psy16199 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACND-SGYQAITFHPETHQAHVTDECTGCT-LC---------LSILIASI 570 (842)
Q Consensus 502 vt~~~~~~n~~~~~~~~~~~~~in~~~c~~Gfn~-~G~dai~~~~~~~~~~~~~~~~~~~-~~---------~~pvi~si 570 (842)
--.+|. ++.+ .|.... ..++. ..+....++ .+ +.||++-+
T Consensus 168 -------------------~iein~-----~sP~~~g~~~~-~~~~~----~~~il~~vr~~~~~~~~~~g~~~Pv~vKi 218 (336)
T 1f76_A 168 -------------------YIAINI-----SSPNTPGLRTL-QYGEA----LDDLLTAIKNKQNDLQAMHHKYVPIAVKI 218 (336)
T ss_dssp -------------------EEEEEC-----CCSSSTTGGGG-GSHHH----HHHHHHHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred -------------------EEEEEc-----cCCCCCCcccc-cCHHH----HHHHHHHHHHHHHhhhhcccccCceEEEe
Confidence 000121 1111 010000 00000 000001111 11 47999998
Q ss_pred ccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCC------CCCCcccCCC-CHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 571 MCTYNKDDWLELSKKTEKAGADALELNLSCPHGMG------ERGMGLACGQ-DPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 571 ~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~------~~~~G~~~~~-~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
..+.+.++..++++.++++|+|+|.+.-....... ....|.--+. ......+.++.+++.+ ++||+. ..
T Consensus 219 ~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~--~G 296 (336)
T 1f76_A 219 APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIG--VG 296 (336)
T ss_dssp CSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEE--ES
T ss_pred cCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEE--EC
Confidence 76667789999999999999999998532110000 0011110011 1223457788888877 799875 45
Q ss_pred ChhcHHHHHHHHHHCCCCEEEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v 663 (842)
.+.+..+..+++. .|||+|-+
T Consensus 297 GI~~~~da~~~l~-~GAd~V~i 317 (336)
T 1f76_A 297 GIDSVIAAREKIA-AGASLVQI 317 (336)
T ss_dssp SCCSHHHHHHHHH-HTCSEEEE
T ss_pred CCCCHHHHHHHHH-CCCCEEEe
Confidence 5666666666665 68999988
No 211
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.40 E-value=8e-06 Score=91.49 Aligned_cols=145 Identities=21% Similarity=0.218 Sum_probs=95.4
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCChh
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPNIT 644 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~~~ 644 (842)
+-+.+ |.+.+++.++ +.+.++|+|.|-|... | -..+.+.+.++++++.. ++||++==..
T Consensus 272 VgAAV--gv~~d~~eR~-~aLv~AGvD~iviD~a--h------------Ghs~~v~~~i~~ik~~~p~~~viaGNVa--- 331 (556)
T 4af0_A 272 CGAAI--GTRPGDKDRL-KLLAEAGLDVVVLDSS--Q------------GNSVYQIEFIKWIKQTYPKIDVIAGNVV--- 331 (556)
T ss_dssp CEEEE--CSSHHHHHHH-HHHHHTTCCEEEECCS--C------------CCSHHHHHHHHHHHHHCTTSEEEEEEEC---
T ss_pred eEEEe--ccCccHHHHH-HHHHhcCCcEEEEecc--c------------cccHHHHHHHHHHHhhCCcceEEecccc---
Confidence 45555 4556655554 4555689999999642 2 12366789999999876 6788763322
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
. .+-++.|.++|||+|.+.=..++. =++ +-. .+. |.+ .-.|+.-+++.++.+ ++|||+-||
T Consensus 332 T-~e~a~~Li~aGAD~vkVGiGpGSi-----CtT-r~v------~Gv----G~P-Q~tAi~~~a~~a~~~-~vpvIADGG 392 (556)
T 4af0_A 332 T-REQAAQLIAAGADGLRIGMGSGSI-----CIT-QEV------MAV----GRP-QGTAVYAVAEFASRF-GIPCIADGG 392 (556)
T ss_dssp S-HHHHHHHHHHTCSEEEECSSCSTT-----BCC-TTT------CCS----CCC-HHHHHHHHHHHHGGG-TCCEEEESC
T ss_pred C-HHHHHHHHHcCCCEEeecCCCCcc-----ccc-ccc------cCC----CCc-HHHHHHHHHHHHHHc-CCCEEecCC
Confidence 2 466888999999999983111110 000 000 111 111 112344445555666 699999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhh
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQ 749 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l 749 (842)
|.+.-|+.++|++|||+||+|+.|-
T Consensus 393 I~~sGDi~KAlaaGAd~VMlGsllA 417 (556)
T 4af0_A 393 IGNIGHIAKALALGASAVMMGGLLA 417 (556)
T ss_dssp CCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred cCcchHHHHHhhcCCCEEEEchhhc
Confidence 9999999999999999999999775
No 212
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.39 E-value=1.1e-05 Score=82.33 Aligned_cols=160 Identities=13% Similarity=0.154 Sum_probs=103.4
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhc-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
++..+..+-++.+|....++...+. |-+.|-|-+-. +..+ +.-|+..+.+-.+.+.+. ++-|+..+++|+
T Consensus 65 ~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi~-----d~~~---l~pD~~~tv~aa~~L~k~-Gf~Vlpy~~~D~ 135 (268)
T 2htm_A 65 RLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVIP-----DPTY---LLPDPLETLKAAERLIEE-DFLVLPYMGPDL 135 (268)
T ss_dssp EEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCS-----CTTT---TCCCHHHHHHHHHHHHHT-TCEECCEECSCH
T ss_pred hccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeecc-----Cccc---cCcCHHHHHHHHHHHHHC-CCEEeeccCCCH
Confidence 4444544336889998888876553 56776664422 1111 346777776777766554 334433345543
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCC-CcEEEe
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-FPILGI 722 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~-ipIi~~ 722 (842)
.+++++++.|++.|.-.... .|. |..+. ...+++.+++..++ +|||..
T Consensus 136 ----~~ak~l~~~G~~aVmPlg~p-----------------------IGs--G~Gi~--~~~~L~~i~~~~~~~vPVI~~ 184 (268)
T 2htm_A 136 ----VLAKRLAALGTATVMPLAAP-----------------------IGS--GWGVR--TRALLELFAREKASLPPVVVD 184 (268)
T ss_dssp ----HHHHHHHHHTCSCBEEBSSS-----------------------TTT--CCCST--THHHHHHHHHTTTTSSCBEEE
T ss_pred ----HHHHHHHhcCCCEEEecCcc-----------------------CcC--CcccC--CHHHHHHHHHhcCCCCeEEEe
Confidence 78999999999998542221 111 11111 14557788773347 999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhccC-c-hhHHHHHHHHH
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQD-F-TVVDDYITGLQ 764 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~g-p-~~~~~i~~~l~ 764 (842)
|||.|++|+.+++++||++|+|+|++.... | ...+.+++.++
T Consensus 185 GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 185 AGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp SCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999422 3 34555555443
No 213
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.34 E-value=8e-06 Score=85.09 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=88.4
Q ss_pred HHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC-----ChhcHHHHHHHHHHC
Q psy16199 582 LSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP-----NITNITDIAKAAYEG 656 (842)
Q Consensus 582 ~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p-----~~~~~~~~a~~~~~~ 656 (842)
-++.+.+.|||.|++-++. |.....+.+.+.+-+++|++..+-| .+|+.- +.+++...++.+.++
T Consensus 131 Ea~~Ai~~GAdEIDmVINi---------g~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~ea 200 (288)
T 3oa3_A 131 EAKRAMQNGASELDMVMNY---------PWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLA 200 (288)
T ss_dssp HHHHHHHTTCSEEEEECCH---------HHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEeeh---------hhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHc
Confidence 3444455699999965421 2222356788999999999988766 477632 223566778889999
Q ss_pred CCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC-CCCcEEEecCcCCHHHHHHHH
Q psy16199 657 KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADVALQFI 735 (842)
Q Consensus 657 G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~-~~ipIi~~GGI~t~~da~~~l 735 (842)
|+|+|-.+ |- ++ .+.+ .+-..++++++.+.. ++++|.++|||+|.+|+.+++
T Consensus 201 GADfVKTS-TG-----------------------f~--~~GA-T~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi 253 (288)
T 3oa3_A 201 GADYVKTS-TG-----------------------FN--GPGA-SIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMV 253 (288)
T ss_dssp TCSEEECC-CS-----------------------SS--SCCC-CHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHH
T ss_pred CCCEEEcC-CC-----------------------CC--CCCC-CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence 99999763 20 10 1111 233456666665532 369999999999999999999
Q ss_pred HhCCCEEEEehh
Q psy16199 736 QAGAHAVQICSA 747 (842)
Q Consensus 736 ~~GA~~Vqv~ta 747 (842)
++||+-+...++
T Consensus 254 ~aGA~RiGtS~g 265 (288)
T 3oa3_A 254 RAGAERLGASAG 265 (288)
T ss_dssp HTTCSEEEESCH
T ss_pred HcCCceeehhhH
Confidence 999997765544
No 214
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.33 E-value=5.4e-06 Score=85.27 Aligned_cols=168 Identities=23% Similarity=0.222 Sum_probs=110.9
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEecc----CCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLS----CPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP 641 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~s----cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p 641 (842)
++.+|.++ +.+++.+.++.+.+.|+|+|++.+- .|+. + .. .++++.+++.++.|+.+-+.-
T Consensus 13 i~p~i~a~-d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~---~-------~~----~~~i~~l~~~~~~~~~v~l~v 77 (230)
T 1rpx_A 13 VSPSILSA-NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI---T-------IG----PLVVDSLRPITDLPLDVHLMI 77 (230)
T ss_dssp EEEBGGGS-CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB---C-------CC----HHHHHHHGGGCCSCEEEEEES
T ss_pred EEEEeecC-CHHHHHHHHHHHHHCCCCEEEEeeccCCccccc---c-------cC----HHHHHHHHhccCCcEEEEEEe
Confidence 67777754 6888899999998899999999751 2321 1 11 266777787777777665533
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecC--CCcc--------------ccCCCC-CCCCCccc-----CCCc---cccCCCCC
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINT--VSGL--------------MSLSAD-GNPWPAVG-----TKKL---TTYGGVSG 696 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt--~~~~--------------~~~~~~-~~~~p~~~-----~~~~---~~~gG~sG 696 (842)
+ +..+.++.+.++|+|+|+++-. .... .++.+. .+....+. ...- +..+|+.|
T Consensus 78 n--d~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g 155 (230)
T 1rpx_A 78 V--EPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGG 155 (230)
T ss_dssp S--SHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSS
T ss_pred c--CHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCC
Confidence 2 3456778888899999988776 2111 011111 00000000 0001 22246667
Q ss_pred CccccchHHHHHHHHhhCC----CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 697 NATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 697 ~~~~p~al~~v~~i~~~~~----~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
....+..++.++++++..+ ++||++.|||+ ++++.+++.+||++|-++|++...
T Consensus 156 ~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a 213 (230)
T 1rpx_A 156 QSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 213 (230)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred ccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCC
Confidence 6555667777777777653 69999999997 899999999999999999999953
No 215
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.33 E-value=5.5e-06 Score=85.10 Aligned_cols=172 Identities=20% Similarity=0.150 Sum_probs=110.0
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhc
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITN 645 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~ 645 (842)
++.||+++ +..++.+.++.++++|+|.|++.+--=+.. ++...-.++++.+++.+++|+.+-+--+ +
T Consensus 7 i~psila~-D~~~l~~~i~~~~~~Gad~ihldi~DG~fv----------p~~~~g~~~v~~lr~~~~~~~~vhlmv~--d 73 (230)
T 1tqj_A 7 VAPSILSA-DFSRLGEEIKAVDEAGADWIHVDVMDGRFV----------PNITIGPLIVDAIRPLTKKTLDVHLMIV--E 73 (230)
T ss_dssp EEEBGGGS-CGGGHHHHHHHHHHTTCSEEEEEEEBSSSS----------SCBCBCHHHHHHHGGGCCSEEEEEEESS--S
T ss_pred EEEEeeec-CHhHHHHHHHHHHHcCCCEEEEEEEecCCC----------cchhhhHHHHHHHHhhcCCcEEEEEEcc--C
Confidence 68899875 688889999999888999999987210100 0111112778888888888888655332 2
Q ss_pred HHHHHHHHHHCCCCEEEEecC--CCc--------------cccCCCCC-CC----CCcccC-CC---ccccCCCCCCccc
Q psy16199 646 ITDIAKAAYEGKADGVSAINT--VSG--------------LMSLSADG-NP----WPAVGT-KK---LTTYGGVSGNATR 700 (842)
Q Consensus 646 ~~~~a~~~~~~G~d~i~v~nt--~~~--------------~~~~~~~~-~~----~p~~~~-~~---~~~~gG~sG~~~~ 700 (842)
..++++.+.++|+|+|+++-- ... ..++.+.. ++ .+.... .. .+..+|..|....
T Consensus 74 p~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~~ 153 (230)
T 1tqj_A 74 PEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFI 153 (230)
T ss_dssp GGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----CCCC
T ss_pred HHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCccCc
Confidence 234556677777777777644 110 01122210 10 000000 00 1234556666666
Q ss_pred cchHHHHHHHHhhCC----CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 701 PMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 701 p~al~~v~~i~~~~~----~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
|..++.++++++..+ ++||.+.|||.. +++.+++.+|||.+-++|+++..
T Consensus 154 ~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a 207 (230)
T 1tqj_A 154 PEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNA 207 (230)
T ss_dssp GGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTS
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 788999999888753 699999999987 99999999999999999999954
No 216
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.31 E-value=2.8e-06 Score=86.24 Aligned_cols=160 Identities=13% Similarity=0.076 Sum_probs=99.1
Q ss_pred HHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh------------------c
Q psy16199 584 KKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT------------------N 645 (842)
Q Consensus 584 ~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~------------------~ 645 (842)
+.+.+.|+|+|+|-. +.+-..+.+.++++.+|+ .++|+++ ++.+.+ +
T Consensus 30 ~~~~~~GtDaI~vGg-------------s~gvt~~~~~~~v~~ik~-~~~Piil-~p~~~~~~~~gaD~il~pslln~~~ 94 (235)
T 3w01_A 30 DAICMSQTDAIMIGG-------------TDDVTEDNVIHLMSKIRR-YPLPLVL-EISNIESVMPGFDFYFVPTVLNSTD 94 (235)
T ss_dssp HHHHTSSCSEEEECC-------------SSCCCHHHHHHHHHHHTT-SCSCEEE-ECCCSTTCCTTCSEEEEEEETTBSS
T ss_pred HHHHHcCCCEEEECC-------------cCCcCHHHHHHHHHHhcC-cCCCEEE-ecCCHHHhhcCCCEEEEccccCCCC
Confidence 335677999999943 334678999999999999 8999988 322221 1
Q ss_pred ----HHHHHHHHHHCCC-----CEEE----EecCCCccccCCCCCCCCCcccCCCcc-c-------cCC----CCCCccc
Q psy16199 646 ----ITDIAKAAYEGKA-----DGVS----AINTVSGLMSLSADGNPWPAVGTKKLT-T-------YGG----VSGNATR 700 (842)
Q Consensus 646 ----~~~~a~~~~~~G~-----d~i~----v~nt~~~~~~~~~~~~~~p~~~~~~~~-~-------~gG----~sG~~~~ 700 (842)
+....+.+++.|. +-|. +.|.......+. +....|....-... . .+- +||..
T Consensus 95 ~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~-~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~~-- 171 (235)
T 3w01_A 95 VAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHT-KANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIY-- 171 (235)
T ss_dssp GGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHT-TBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTSC--
T ss_pred cchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcc-cCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCCc--
Confidence 1122445666676 5444 445322111000 00000000000000 0 000 15532
Q ss_pred cchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 701 PMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 701 p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
-..++++++++.++++||+..|||+|++++.++.. |||+|-|||++.. +|..+.++.+.++
T Consensus 172 -g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~-~~~~~~e~v~~v~ 232 (235)
T 3w01_A 172 -GDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK-DIKKALKTVKIKE 232 (235)
T ss_dssp -CCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH-CHHHHHHTTCC--
T ss_pred -CCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec-CHHHHHHHHHHHh
Confidence 25889999999875799999999999999998777 9999999999995 6888777655443
No 217
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.31 E-value=2e-06 Score=89.55 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=74.2
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
++.++|+.+++.|++.|.++.-.. .+.. .+..++.++++++.+ ++||+++||
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~----------------------~~~~-----~~~~~~~i~~i~~~~-~ipvi~~Gg 87 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDR----------------------DGTK-----SGYDTEMIRFVRPLT-TLPIIASGG 87 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTT----------------------TTCS-----SCCCHHHHHHHGGGC-CSCEEEESC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCc----------------------ccCC-----CcccHHHHHHHHHhC-CCCEEEeCC
Confidence 688999999999999999854211 0111 122378899999998 799999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
|.+.+|+.+++++||+.|.++|+++. .|+++.++.+.+
T Consensus 88 i~~~~~~~~~l~~Gad~V~ig~~~l~-dp~~~~~~~~~~ 125 (247)
T 3tdn_A 88 AGKMEHFLEAFLRGADKVSINTAAVE-NPSLITQIAQTF 125 (247)
T ss_dssp CCSHHHHHHHHHTTCSEECCSHHHHH-CTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCeeehhhHHhh-ChHHHHHHHHHh
Confidence 99999999999999999999999994 599888887765
No 218
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.30 E-value=3.5e-06 Score=85.76 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=86.0
Q ss_pred hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe---cCCh--hcHHHHHH
Q psy16199 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL---TPNI--TNITDIAK 651 (842)
Q Consensus 577 e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl---~p~~--~~~~~~a~ 651 (842)
+.-..-++.+.+.|||.|++.++- |.-...+.+.+.+-++++++..+- ..+|+ +..+ +.+...++
T Consensus 95 ~~Kv~Ea~~Ai~~GAdEIDmViNi---------g~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ 164 (239)
T 3ngj_A 95 EVKAYETKVAVEQGAEEVDMVINI---------GMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCK 164 (239)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCH---------HHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeeh---------HHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHH
Confidence 333333444445699999987532 222235678888888888887651 24554 2222 35777788
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC-CCCcEEEecCcCCHHH
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADV 730 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~-~~ipIi~~GGI~t~~d 730 (842)
.+.++|+|+|..+..+ -.|.+ +++.++.+++.+ ++++|-++|||+|.+|
T Consensus 165 ia~~aGADfVKTSTGf--------------------------~~ggA----t~~dv~lmr~~vg~~v~VKasGGIrt~~d 214 (239)
T 3ngj_A 165 RCVAAGAEYVKTSTGF--------------------------GTHGA----TPEDVKLMKDTVGDKALVKAAGGIRTFDD 214 (239)
T ss_dssp HHHHHTCSEEECCCSS--------------------------SSCCC----CHHHHHHHHHHHGGGSEEEEESSCCSHHH
T ss_pred HHHHHCcCEEECCCCC--------------------------CCCCC----CHHHHHHHHHhhCCCceEEEeCCCCCHHH
Confidence 8899999999863211 01111 144455555544 2599999999999999
Q ss_pred HHHHHHhCCCEEEEehh
Q psy16199 731 ALQFIQAGAHAVQICSA 747 (842)
Q Consensus 731 a~~~l~~GA~~Vqv~ta 747 (842)
+.+++++||+-+...++
T Consensus 215 a~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 215 AMKMINNGASRIGASAG 231 (239)
T ss_dssp HHHHHHTTEEEEEESCH
T ss_pred HHHHHHhcccceecccH
Confidence 99999999998776654
No 219
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.29 E-value=1.6e-05 Score=81.55 Aligned_cols=141 Identities=19% Similarity=0.255 Sum_probs=99.6
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+.+-++. +++++|.+.+. ++|+|+|.++...+. +.+.+.++.+++. ++.+++-+.|+.
T Consensus 65 ~~~~v~lmv-~d~~~~i~~~~---~agad~v~vH~~~~~---------------~~~~~~~~~i~~~-g~~igv~~~p~t 124 (228)
T 1h1y_A 65 AYLDCHLMV-TNPSDYVEPLA---KAGASGFTFHIEVSR---------------DNWQELIQSIKAK-GMRPGVSLRPGT 124 (228)
T ss_dssp SEEEEEEES-SCGGGGHHHHH---HHTCSEEEEEGGGCT---------------TTHHHHHHHHHHT-TCEEEEEECTTS
T ss_pred CcEEEEEEe-cCHHHHHHHHH---HcCCCEEEECCCCcc---------------cHHHHHHHHHHHc-CCCEEEEEeCCC
Confidence 578888885 67777655544 369999999864321 1224566677654 678888886643
Q ss_pred hcHHHHHHHHHHC--CCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 644 TNITDIAKAAYEG--KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 644 ~~~~~~a~~~~~~--G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
. .+..+.+.+. ++|.|.+.. ..+|.+|....+..++.++++++..+++||+.
T Consensus 125 ~--~e~~~~~~~~~~~~d~vl~~s------------------------v~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v 178 (228)
T 1h1y_A 125 P--VEEVFPLVEAENPVELVLVMT------------------------VEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV 178 (228)
T ss_dssp C--GGGGHHHHHSSSCCSEEEEES------------------------SCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE
T ss_pred C--HHHHHHHHhcCCCCCEEEEEe------------------------ecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE
Confidence 2 2334455565 899887721 12233444445677888999988875799999
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
.|||.. +++.+++.+|||.+-++|+++..
T Consensus 179 ~GGI~~-~ni~~~~~aGaD~vvvGsai~~~ 207 (228)
T 1h1y_A 179 DGGLGP-STIDVAASAGANCIVAGSSIFGA 207 (228)
T ss_dssp ESSCST-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred ECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 999976 89999999999999999999954
No 220
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.25 E-value=1.7e-05 Score=83.17 Aligned_cols=115 Identities=17% Similarity=0.184 Sum_probs=83.5
Q ss_pred hcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCC
Q psy16199 588 KAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTV 667 (842)
Q Consensus 588 ~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~ 667 (842)
.+|||+|-|.... .+++.+.++++..++ .++.+++-+. +..+ ++.+.+.|+|.|.++|+-
T Consensus 133 ~~GAD~VlLi~a~--------------l~~~~l~~l~~~a~~-lGl~~lvev~----t~ee-~~~A~~~Gad~IGv~~r~ 192 (272)
T 3qja_A 133 AHGADMLLLIVAA--------------LEQSVLVSMLDRTES-LGMTALVEVH----TEQE-ADRALKAGAKVIGVNARD 192 (272)
T ss_dssp HTTCSEEEEEGGG--------------SCHHHHHHHHHHHHH-TTCEEEEEES----SHHH-HHHHHHHTCSEEEEESBC
T ss_pred HcCCCEEEEeccc--------------CCHHHHHHHHHHHHH-CCCcEEEEcC----CHHH-HHHHHHCCCCEEEECCCc
Confidence 4699999996432 234567777777765 5778777553 3344 345557899999997752
Q ss_pred CccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEeh
Q psy16199 668 SGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICS 746 (842)
Q Consensus 668 ~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~t 746 (842)
... .+..++.+.++.+.++ ++|+++.|||.|++|+.+++.+||++|.||+
T Consensus 193 l~~-----------------------------~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGs 243 (272)
T 3qja_A 193 LMT-----------------------------LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGE 243 (272)
T ss_dssp TTT-----------------------------CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred ccc-----------------------------cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 211 1111344567777775 6999999999999999999999999999999
Q ss_pred hhhcc
Q psy16199 747 AVQNQ 751 (842)
Q Consensus 747 a~l~~ 751 (842)
+++..
T Consensus 244 al~~a 248 (272)
T 3qja_A 244 GLVTS 248 (272)
T ss_dssp HHHTC
T ss_pred HHhCC
Confidence 99954
No 221
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.22 E-value=2.7e-05 Score=86.47 Aligned_cols=146 Identities=8% Similarity=0.055 Sum_probs=114.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~ 642 (842)
.|+..++. +.+++++.+.++++.++|++.|+++++| +++...+++++||+.+ ++|+.++....
T Consensus 137 v~~~~~~~-~~~~e~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~gd~~l~vD~n~~ 200 (384)
T 2pgw_A 137 VGYFYFLQ-GETAEELARDAAVGHAQGERVFYLKVGR---------------GEKLDLEITAAVRGEIGDARLRLDANEG 200 (384)
T ss_dssp EEBCEECC-CSSHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHHTTSTTCEEEEECTTC
T ss_pred eEEEEECC-CCCHHHHHHHHHHHHHcCCCEEEECcCC---------------CHHHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 34444443 3589999999999888999999999754 5677889999999988 68999987654
Q ss_pred h--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEE
Q psy16199 643 I--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPIL 720 (842)
Q Consensus 643 ~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi 720 (842)
+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||+
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~~~~~~~~l~~~~-~iPI~ 245 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIEQ-----------------P-----------------TVSWSIPAMAHVREKV-GIPIV 245 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEeC-----------------C-----------------CChhhHHHHHHHHhhC-CCCEE
Confidence 3 47788999999999987631 1 0122377888899888 79999
Q ss_pred EecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 721 GIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 721 ~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
+.+.+.+.+++.+++..| +|.|++-..-+ .|+.-..++.+
T Consensus 246 ~de~i~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~~ 286 (384)
T 2pgw_A 246 ADQAAFTLYDVYEICRQRAADMICIGPREI-GGIQPMMKAAA 286 (384)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHHHH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEcchhh-CCHHHHHHHHH
Confidence 999999999999999965 89999988777 45665555543
No 222
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.18 E-value=2.6e-05 Score=79.56 Aligned_cols=117 Identities=18% Similarity=0.193 Sum_probs=76.9
Q ss_pred HHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEE
Q psy16199 584 KKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 584 ~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v 663 (842)
+.+.++|+|+|.++... ...+.+ +.+.. ++.+.+-+. +..+ ++.+.+.|+|.|.+
T Consensus 82 ~~a~~~gad~v~l~~~~--------------~~~~~~----~~~~~--~~~ig~sv~----t~~~-~~~a~~~gaD~i~~ 136 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGS--------------FSPKQI----RARFP--HLHIGRSVH----SLEE-AVQAEKEDADYVLF 136 (221)
T ss_dssp HHHHTTTCCEEEECTTS--------------CCHHHH----HHHCT--TCEEEEEEC----SHHH-HHHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEeCCCc--------------cCHHHH----HHHCC--CCEEEEEcC----CHHH-HHHHHhCCCCEEEE
Confidence 33456799999886321 112222 22222 444554332 3333 56778899999988
Q ss_pred ecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEE
Q psy16199 664 INTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743 (842)
Q Consensus 664 ~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vq 743 (842)
.+.+... +..|+ .+..++.++++++.. ++||++.||| +++++.+++.+||++|.
T Consensus 137 ~~~f~~~------------------~~~g~------~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~ 190 (221)
T 1yad_A 137 GHVFETD------------------CKKGL------EGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIA 190 (221)
T ss_dssp ECCC----------------------------------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEE
T ss_pred CCccccC------------------CCCCC------CCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEE
Confidence 6532210 00111 255688899998887 7999999999 99999999999999999
Q ss_pred Eehhhhcc
Q psy16199 744 ICSAVQNQ 751 (842)
Q Consensus 744 v~ta~l~~ 751 (842)
++|+++..
T Consensus 191 vgs~i~~~ 198 (221)
T 1yad_A 191 VMSGIFSS 198 (221)
T ss_dssp ESHHHHTS
T ss_pred EhHHhhCC
Confidence 99999954
No 223
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.17 E-value=2.6e-05 Score=80.25 Aligned_cols=168 Identities=16% Similarity=0.132 Sum_probs=110.3
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEecc----CCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEe
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLS----CPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKL 639 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~s----cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl 639 (842)
.+-.||.+ .+...+.+.+++++++|+|.+.+.+- .||.. + -+ ++++++|+.+ ++|+-+.+
T Consensus 29 ~i~pSils-aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit----~------G~----~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 29 QINPSILS-ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLT----F------GP----MVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp EEEEBGGG-SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC----C------CH----HHHHHHHHHTCCSCEEEEE
T ss_pred eeehhhhc-CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchh----c------CH----HHHHHHHHhCCCCeEEEEE
Confidence 46778875 57778888888999899999999652 56531 1 12 6788888888 89999998
Q ss_pred cCChhcHHHHHHHHHHCCCCEEEEecCC--------------CccccCCCCC-CCC----CcccCC----CccccCCCCC
Q psy16199 640 TPNITNITDIAKAAYEGKADGVSAINTV--------------SGLMSLSADG-NPW----PAVGTK----KLTTYGGVSG 696 (842)
Q Consensus 640 ~p~~~~~~~~a~~~~~~G~d~i~v~nt~--------------~~~~~~~~~~-~~~----p~~~~~----~~~~~gG~sG 696 (842)
..+ +...+++.+.++|+|.|+++--. +-..++.+.. ++. +.+... -.+...|+.|
T Consensus 94 mv~--~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgG 171 (246)
T 3inp_A 94 MVK--PVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGG 171 (246)
T ss_dssp ECS--SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--
T ss_pred eeC--CHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCC
Confidence 642 33445556666666666654311 0001111110 111 111100 0123467788
Q ss_pred CccccchHHHHHHHHhhC----CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 697 NATRPMGLKAVSSIAKMF----PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 697 ~~~~p~al~~v~~i~~~~----~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
..-.|.+++.|+++++.. .+++|...|||. .+.+.++.++||+.+-+||++..
T Consensus 172 Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 172 QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFN 228 (246)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHT
T ss_pred cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhC
Confidence 777788899998888753 258999999996 78999999999999999999884
No 224
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.17 E-value=3e-05 Score=79.67 Aligned_cols=126 Identities=21% Similarity=0.184 Sum_probs=85.1
Q ss_pred HHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEec---CCh--hcHHHHHHHHHHC
Q psy16199 582 LSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLT---PNI--TNITDIAKAAYEG 656 (842)
Q Consensus 582 ~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~---p~~--~~~~~~a~~~~~~ 656 (842)
-++.+.+.|||.|++-++- |.....+.+.+.+-+.++++..+ ...+|+. ..+ +++...++.+.++
T Consensus 116 Ea~~Ai~~GAdEIDmViNi---------g~lk~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~ea 185 (260)
T 3r12_A 116 EAIFAVESGADEIDMVINV---------GMLKAKEWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLA 185 (260)
T ss_dssp HHHHHHHHTCSEEEEECCH---------HHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEeeh---------hhhccccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3444445699999986421 22223577888888889988865 3345763 222 3577788888999
Q ss_pred CCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC-CCCcEEEecCcCCHHHHHHHH
Q psy16199 657 KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADVALQFI 735 (842)
Q Consensus 657 G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~-~~ipIi~~GGI~t~~da~~~l 735 (842)
|+|+|-.+ | |...+.+ +++-++.+++.+ ++++|-++|||+|.+|+.+++
T Consensus 186 GADfVKTS-T-------------------------Gf~~~GA----T~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi 235 (260)
T 3r12_A 186 GAHFVKTS-T-------------------------GFGTGGA----TAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMI 235 (260)
T ss_dssp TCSEEECC-C-------------------------SSSSCCC----CHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH
T ss_pred CcCEEEcC-C-------------------------CCCCCCC----CHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence 99999763 2 1111111 244555555554 359999999999999999999
Q ss_pred HhCCCEEEEehh
Q psy16199 736 QAGAHAVQICSA 747 (842)
Q Consensus 736 ~~GA~~Vqv~ta 747 (842)
++||+-+...++
T Consensus 236 ~aGA~RiGtS~g 247 (260)
T 3r12_A 236 MYGADRIGTSSG 247 (260)
T ss_dssp HTTCSEEEESCH
T ss_pred HcCCceeecchH
Confidence 999997765543
No 225
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.16 E-value=6.6e-05 Score=78.54 Aligned_cols=136 Identities=18% Similarity=0.173 Sum_probs=92.7
Q ss_pred HHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhh---CCccEEEEecC---------ChhcHHHHH
Q psy16199 583 SKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS---VKIPFFVKLTP---------NITNITDIA 650 (842)
Q Consensus 583 a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~---~~~Pv~vKl~p---------~~~~~~~~a 650 (842)
++.+.+.|||+|.+.++--. .+.+.+.+.++.+++. .++|+++=..+ +...+...+
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~ 165 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGS------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAA 165 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTS------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCC------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHH
Confidence 34444569999998541110 2334455555555543 37898876544 333455567
Q ss_pred HHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcC--CH
Q psy16199 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGID--SA 728 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~--t~ 728 (842)
+.+.+.|+|.|.+. + . ...+.++++++..+.+||+++|||. +.
T Consensus 166 ~~a~~~GAD~vkt~-~-~---------------------------------~~~e~~~~~~~~~~~~pV~asGGi~~~~~ 210 (263)
T 1w8s_A 166 RIALELGADAMKIK-Y-T---------------------------------GDPKTFSWAVKVAGKVPVLMSGGPKTKTE 210 (263)
T ss_dssp HHHHHHTCSEEEEE-C-C---------------------------------SSHHHHHHHHHHTTTSCEEEECCSCCSSH
T ss_pred HHHHHcCCCEEEEc-C-C---------------------------------CCHHHHHHHHHhCCCCeEEEEeCCCCCCH
Confidence 88999999999883 1 0 0256677888777434999999999 99
Q ss_pred HHHHHHH----HhCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 729 DVALQFI----QAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 729 ~da~~~l----~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
+|+.+++ .+||+++.++|+++.. ++ +....+.|.+.+
T Consensus 211 ~~~l~~i~~~~~aGA~GvsvgraI~~~-~d-p~~~~~~l~~~v 251 (263)
T 1w8s_A 211 EDFLKQVEGVLEAGALGIAVGRNVWQR-RD-ALKFARALAELV 251 (263)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHHHHTS-TT-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEehhhcCC-cC-HHHHHHHHHHHH
Confidence 9999888 7999999999999954 44 455556665544
No 226
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.15 E-value=7e-05 Score=76.22 Aligned_cols=169 Identities=18% Similarity=0.211 Sum_probs=104.3
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEec--cC-CCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNL--SC-PHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~--sc-P~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
+..+|.+ .+..++.+.++.+.+.|+|++++-+ +. +... ...+ ++++.+++.++.|+.+-+.-+
T Consensus 6 ~~~~i~a-~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~---------~~g~----~~i~~i~~~~~~~~~v~l~v~ 71 (220)
T 2fli_A 6 IAPSILA-ADYANFASELARIEETDAEYVHIDIMDGQFVPNI---------SFGA----DVVASMRKHSKLVFDCHLMVV 71 (220)
T ss_dssp EEEBGGG-SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB---------CBCH----HHHHHHHTTCCSEEEEEEESS
T ss_pred EEEEEEe-CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCcc---------ccCH----HHHHHHHHhCCCCEEEEEeec
Confidence 5667765 4778899999999988999988875 32 2110 0113 556667777677777654321
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCcc--------------ccCCCCC-CCCCcc----cC-CCc---cccCCCCCCcc
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGL--------------MSLSADG-NPWPAV----GT-KKL---TTYGGVSGNAT 699 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~--------------~~~~~~~-~~~p~~----~~-~~~---~~~gG~sG~~~ 699 (842)
+..+.++.+.++|+|+|+++-..... .++.+.. +....+ .. ..- +...|+.|...
T Consensus 72 --d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~ 149 (220)
T 2fli_A 72 --DPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAF 149 (220)
T ss_dssp --SGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCC
T ss_pred --CHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccccc
Confidence 22223477777888888876432111 0111110 000000 00 001 12345666654
Q ss_pred ccchHHHHHHHHhhCC----CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 700 RPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 700 ~p~al~~v~~i~~~~~----~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
.+..++.++++++..+ ++||++.|||+ ++++.+++.+||++|-++|+++..
T Consensus 150 ~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 150 IPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp CGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred CHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 5666677777766542 68999999998 899999999999999999999953
No 227
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.13 E-value=3.3e-05 Score=78.32 Aligned_cols=126 Identities=25% Similarity=0.341 Sum_probs=85.8
Q ss_pred HHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEec---CCh------hcHHHHHHH
Q psy16199 582 LSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLT---PNI------TNITDIAKA 652 (842)
Q Consensus 582 ~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~---p~~------~~~~~~a~~ 652 (842)
-++.+.+.|||.|++.++- |.....+.+.+.+-+.++++..+ ...+|+. ..+ +.+...++.
T Consensus 85 E~~~Ai~~GAdEIDmVini---------g~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~i 154 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVIDV---------GAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRV 154 (231)
T ss_dssp HHHHHHHTTCSEEEEECCH---------HHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeeh---------HhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHH
Confidence 3444555699999986521 22233677888888999998875 3345752 222 356778888
Q ss_pred HHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCC-CCCccccchHHHHHHHHhhC-CCCcEEEecCcCCHHH
Q psy16199 653 AYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV-SGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADV 730 (842)
Q Consensus 653 ~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~-sG~~~~p~al~~v~~i~~~~-~~ipIi~~GGI~t~~d 730 (842)
+.++|+|+|-.+. |.. .|.+ +++-++.+++.+ ++++|-++|||+|.+|
T Consensus 155 a~~aGADfVKTST--------------------------Gf~~~~gA----t~edv~lm~~~v~~~v~VKaaGGIrt~~~ 204 (231)
T 3ndo_A 155 ARDAGADFVKTST--------------------------GFHPSGGA----SVQAVEIMARTVGERLGVKASGGIRTAEQ 204 (231)
T ss_dssp HHHTTCSEEECCC--------------------------SCCTTCSC----CHHHHHHHHHHHTTTSEEEEESSCCSHHH
T ss_pred HHHHCcCEEEcCC--------------------------CCCCCCCC----CHHHHHHHHHHhCCCceEEEeCCCCCHHH
Confidence 8999999997621 111 1112 145555555554 3599999999999999
Q ss_pred HHHHHHhCCCEEEEehh
Q psy16199 731 ALQFIQAGAHAVQICSA 747 (842)
Q Consensus 731 a~~~l~~GA~~Vqv~ta 747 (842)
+.+++++||+-+...++
T Consensus 205 a~~~i~aGa~RiGtS~g 221 (231)
T 3ndo_A 205 AAAMLDAGATRLGLSGS 221 (231)
T ss_dssp HHHHHHTTCSEEEESSH
T ss_pred HHHHHHhcchhcccchH
Confidence 99999999997665543
No 228
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.11 E-value=7e-05 Score=78.24 Aligned_cols=121 Identities=16% Similarity=0.211 Sum_probs=87.5
Q ss_pred HhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEec
Q psy16199 586 TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAIN 665 (842)
Q Consensus 586 ~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~n 665 (842)
+..+|||+|-|+..+ .+.+.+.++++..++ .++-++|-+. +..+ ++.+.+.|++.|-+.|
T Consensus 138 a~~~GAD~VlLi~a~--------------L~~~~l~~l~~~a~~-lGl~~lvevh----~~eE-l~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 138 ARSWGADCILIIMAS--------------VDDDLAKELEDTAFA-LGMDALIEVH----DEAE-MERALKLSSRLLGVNN 197 (272)
T ss_dssp HHHTTCSEEEEETTT--------------SCHHHHHHHHHHHHH-TTCEEEEEEC----SHHH-HHHHTTSCCSEEEEEC
T ss_pred HHHcCCCEEEEcccc--------------cCHHHHHHHHHHHHH-cCCeEEEEeC----CHHH-HHHHHhcCCCEEEECC
Confidence 345799999998542 245678888888776 4777777653 3334 4667789999888877
Q ss_pred CCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEE
Q psy16199 666 TVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 666 t~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv 744 (842)
+-... ....+....++.+.+| ++|+|+-|||.|++|+.++..+||++|-|
T Consensus 198 r~l~t-----------------------------~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 198 RNLRS-----------------------------FEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLI 248 (272)
T ss_dssp BCTTT-----------------------------CCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEE
T ss_pred CCCcc-----------------------------CCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 62211 1112444556666665 59999999999999999999999999999
Q ss_pred ehhhhccCchhH
Q psy16199 745 CSAVQNQDFTVV 756 (842)
Q Consensus 745 ~ta~l~~gp~~~ 756 (842)
|+++|.. ++.-
T Consensus 249 G~almr~-~d~~ 259 (272)
T 3tsm_A 249 GESLMRQ-HDVA 259 (272)
T ss_dssp CHHHHTS-SCHH
T ss_pred cHHHcCC-cCHH
Confidence 9999954 4433
No 229
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=98.07 E-value=0.00013 Score=74.34 Aligned_cols=168 Identities=18% Similarity=0.208 Sum_probs=116.9
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEec--c--CCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEec
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNL--S--CPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLT 640 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~--s--cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~ 640 (842)
+-.||.+ .+..++.+..+.++++|+|++.+.+ + .||. .+| + .+++++|+.+ +.|+-+-+.
T Consensus 8 i~pSila-~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~----t~G------~----~~v~~lr~~~p~~~~dvhLm 72 (227)
T 1tqx_A 8 IAPSVLA-SNISKLAEETQRMESLGAEWIHLDVMDMHFVPNL----SFG------P----PVINNLKKYTKSIFFDVHLM 72 (227)
T ss_dssp EEEBGGG-SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB----CCC------H----HHHHHHGGGCSSCEEEEEEE
T ss_pred EEeehhc-CChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcch----hcC------H----HHHHHHHHhCCCCcEEEEEE
Confidence 5678874 5778888888888888999988875 2 2542 111 2 6788889888 788887662
Q ss_pred ---CC------------------hh-cHHHHHH---HHHHCCCCEEEEecCCCccccCCCCCC--CCCcccCCCccccCC
Q psy16199 641 ---PN------------------IT-NITDIAK---AAYEGKADGVSAINTVSGLMSLSADGN--PWPAVGTKKLTTYGG 693 (842)
Q Consensus 641 ---p~------------------~~-~~~~~a~---~~~~~G~d~i~v~nt~~~~~~~~~~~~--~~p~~~~~~~~~~gG 693 (842)
|. .. ++.+.++ .+.+.|...-+..|.-.+...+..-.. ....+- -.+...|
T Consensus 73 v~dp~~~i~~~~~Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~Vl--vmsV~pG 150 (227)
T 1tqx_A 73 VEYPEKYVPLLKTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVL--VMTVEPG 150 (227)
T ss_dssp SSCGGGGGGGCTTSSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEE--EESSCTT
T ss_pred EcCHHHHHHHHHhCCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEE--EeeeccC
Confidence 11 11 4566777 889999887777674222111100000 000110 0134567
Q ss_pred CCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 694 ~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
++|..-.|..++.++++++..++++|...||| +.+.+.+++.+||+.+-+||+++..
T Consensus 151 f~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI-~~~ti~~~~~aGAd~~V~GsaIf~~ 207 (227)
T 1tqx_A 151 FGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGL-NIETTEISASHGANIIVAGTSIFNA 207 (227)
T ss_dssp CSSCCCCGGGHHHHHHHHHHCTTCEEEEESSC-CHHHHHHHHHHTCCEEEESHHHHTC
T ss_pred CCCcccchHHHHHHHHHHHhccCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 88887788999999999998767999999999 5899999999999999999999953
No 230
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.05 E-value=8.4e-05 Score=75.23 Aligned_cols=128 Identities=24% Similarity=0.260 Sum_probs=84.7
Q ss_pred hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe---c--CChhcHHHHHH
Q psy16199 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL---T--PNITNITDIAK 651 (842)
Q Consensus 577 e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl---~--p~~~~~~~~a~ 651 (842)
+.-..-++.+.+.|||.|++.++- |.....+.+.+.+-+.++++..+-+ .+|+ + .+-+.+...++
T Consensus 71 ~~k~~e~~~Ai~~GAdevd~vini---------g~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ 140 (220)
T 1ub3_A 71 EVKALEAALACARGADEVDMVLHL---------GRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAE 140 (220)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCH---------HHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecccc---------hhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHH
Confidence 333344455555799999986521 2222256788888888888887544 5663 1 13346778889
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC-CCCcEEEecCcCCHHH
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADV 730 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~-~~ipIi~~GGI~t~~d 730 (842)
.+.++|+|+|..+. |...|.+ . .+-++.+++.+ .++||-++|||+|.+|
T Consensus 141 ia~eaGADfVKTsT--------------------------Gf~~~ga-t---~~dv~~m~~~vg~~v~VkaaGGirt~~~ 190 (220)
T 1ub3_A 141 AAIRGGADFLKTST--------------------------GFGPRGA-S---LEDVALLVRVAQGRAQVKAAGGIRDRET 190 (220)
T ss_dssp HHHHHTCSEEECCC--------------------------SSSSCCC-C---HHHHHHHHHHHTTSSEEEEESSCCSHHH
T ss_pred HHHHhCCCEEEeCC--------------------------CCCCCCC-C---HHHHHHHHHhhCCCCeEEEECCCCCHHH
Confidence 99999999997621 1111222 1 34444455433 2599999999999999
Q ss_pred HHHHHHhCCCEEEE
Q psy16199 731 ALQFIQAGAHAVQI 744 (842)
Q Consensus 731 a~~~l~~GA~~Vqv 744 (842)
+.+++.+||+-+..
T Consensus 191 al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 191 ALRMLKAGASRLGT 204 (220)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHCCCcccch
Confidence 99999999994433
No 231
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.03 E-value=0.0001 Score=74.53 Aligned_cols=147 Identities=21% Similarity=0.312 Sum_probs=87.7
Q ss_pred HHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHh---hCCccEEEEecCChhcHHHHHHHHH
Q psy16199 578 DWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRS---SVKIPFFVKLTPNITNITDIAKAAY 654 (842)
Q Consensus 578 ~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~---~~~~Pv~vKl~p~~~~~~~~a~~~~ 654 (842)
++.+.++.+.++|+|+|++.. |+ .+++.+.++++.+++ ..++||++. . .++.+.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~--~~------------~~~~~~~~~~~~l~~~~~~~~v~v~v~--~-------~~~~a~ 83 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRI--KN------------APTREMYEIGKTLRQLTREYDALFFVD--D-------RVDVAL 83 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECC--CS------------CCHHHHHHHHHHHHHHHHHTTCEEEEE--S-------CHHHHH
T ss_pred hHHHHHHHHHHCCCCEEEECC--CC------------CCHHHHHHHHHHHHHHHHHcCCeEEEc--C-------hHHHHH
Confidence 666777778888999999864 32 123334444444443 357888884 1 135566
Q ss_pred HCCCCEEEEecCCCc-----------cccCCCCCC---------CCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 655 EGKADGVSAINTVSG-----------LMSLSADGN---------PWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 655 ~~G~d~i~v~nt~~~-----------~~~~~~~~~---------~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
++|+|+|.+...... ..++...+. +...+.... .+.+.+++...+..++.++++++..
T Consensus 84 ~~gad~v~l~~~~~~~~~~~~~~~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~--~~~~~~~~~~~~~~~~~l~~l~~~~ 161 (215)
T 1xi3_A 84 AVDADGVQLGPEDMPIEVAKEIAPNLIIGASVYSLEEALEAEKKGADYLGAGS--VFPTKTKEDARVIGLEGLRKIVESV 161 (215)
T ss_dssp HHTCSEEEECTTSCCHHHHHHHCTTSEEEEEESSHHHHHHHHHHTCSEEEEEC--SSCC----CCCCCHHHHHHHHHHHC
T ss_pred HcCCCEEEECCccCCHHHHHHhCCCCEEEEecCCHHHHHHHHhcCCCEEEEcC--CccCCCCCCCCCcCHHHHHHHHHhC
Confidence 778888876432111 000000000 000000000 0000011112456788899998887
Q ss_pred CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 715 PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
++||++.|||. ++++.+++.+||++|.++|+++..
T Consensus 162 -~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 196 (215)
T 1xi3_A 162 -KIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGA 196 (215)
T ss_dssp -SSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTS
T ss_pred -CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCC
Confidence 79999999998 999999999999999999999953
No 232
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.02 E-value=4.4e-05 Score=78.07 Aligned_cols=105 Identities=27% Similarity=0.352 Sum_probs=71.5
Q ss_pred EEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 635 FFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 635 v~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
+++.+++. +..+ +..+.+.|+|.|.++..+... ...++ ..+..++.++++++.+
T Consensus 117 ~~~~~s~~--t~~e-~~~a~~~g~d~v~~~~v~~t~-------------------~~~~~----~~~~~~~~l~~~~~~~ 170 (227)
T 2tps_A 117 MILGVSAH--TMSE-VKQAEEDGADYVGLGPIYPTE-------------------TKKDT----RAVQGVSLIEAVRRQG 170 (227)
T ss_dssp SEEEEEEC--SHHH-HHHHHHHTCSEEEECCSSCCC-------------------SSSSC----CCCCTTHHHHHHHHTT
T ss_pred cEEEEecC--CHHH-HHHHHhCCCCEEEECCCcCCC-------------------CCCCC----CCccCHHHHHHHHHhC
Confidence 45666543 3344 566778999999983211100 00110 1344578888888877
Q ss_pred CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHHHH
Q psy16199 715 PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQTL 766 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~~~ 766 (842)
+++||++.|||. ++++.+++.+||++|.++|+++.. +| ..++++.+.++.+
T Consensus 171 ~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 171 ISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTY 223 (227)
T ss_dssp CCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHHhc
Confidence 339999999998 999999999999999999999953 34 5566666666554
No 233
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.01 E-value=5.3e-07 Score=100.90 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=33.9
Q ss_pred eCCCCCCC-CCCCeEEeccCCC-----CchhHHHHHHHHHHHHHHHH
Q psy16199 279 VNYTTMAT-SVPGVFCGGDTAN-----LSDTTVESVNDGKTAAWHIH 319 (842)
Q Consensus 279 vd~~~~~T-s~~gVfa~GD~~~-----~~~~~~~A~~~G~~aA~~I~ 319 (842)
+|+.+|++ .+||+|++|++.. +.-..+.|...|+.|+.++.
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 77778884 8999999998854 23578899999999999874
No 234
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.99 E-value=4.5e-05 Score=82.20 Aligned_cols=172 Identities=12% Similarity=0.076 Sum_probs=106.6
Q ss_pred ccccCCcccccCCC-CCCCCCChhHHHHhhhhh-hCc-cccccccCccCCCcc-eeEeeccCCccccCCccccCCCccch
Q psy16199 463 KKLNSDGVSLQNGL-PKRQINTPVETILSVKDV-IGQ-AVQRVTNYTELDNKK-QVVALINDDMCINCGKCYMACNDSGY 538 (842)
Q Consensus 463 ~~~~~~~~g~~~g~-dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~~n~~-~~~~~~~~~~~in~~~c~~Gfn~~G~ 538 (842)
+..+.|||++|+|+ +++ .+.++.+.+. +|+ .++++|+.|+.+||+ |+|++. +.++|+ +|
T Consensus 10 g~~l~nPi~~Aag~~~~~-----~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~--~~~in~----~g------ 72 (314)
T 2e6f_A 10 DHVFANPFMNAAGVLCST-----EEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFP--LGSINS----MG------ 72 (314)
T ss_dssp TEEESSSEEECTTSSCSS-----HHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEET--TEEEEC----CC------
T ss_pred CEecCCCcEECCCCCCCC-----HHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecc--cceeec----CC------
Confidence 45689999999999 888 7778887765 455 999999999999999 788776 344554 11
Q ss_pred hhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHH
Q psy16199 539 QAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPE 618 (842)
Q Consensus 539 dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~ 618 (842)
+. ....+.|.+..+..
T Consensus 73 -------------------------------~~-~~g~~~~~~~~~~~-------------------------------- 88 (314)
T 2e6f_A 73 -------------------------------LP-NLGFDFYLKYASDL-------------------------------- 88 (314)
T ss_dssp -------------------------------CC-BSCHHHHHHHHHHT--------------------------------
T ss_pred -------------------------------CC-CcCHHHHHHHHHHH--------------------------------
Confidence 00 01123332222111
Q ss_pred HHHHHHHHHHhhCCccEEEEecC-ChhcHHHHHHHHHHCCCC---EEEEecCCCccccCCCCCCCCCcccCCCccccCCC
Q psy16199 619 MVRNISLWVRSSVKIPFFVKLTP-NITNITDIAKAAYEGKAD---GVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV 694 (842)
Q Consensus 619 ~~~~ii~~v~~~~~~Pv~vKl~p-~~~~~~~~a~~~~~~G~d---~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~ 694 (842)
++..+.|+++-+.. +.+++.+.++.+.++|+| +|.+ |- .. |.. .+...+|
T Consensus 89 ---------~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iei-n~-~~-----------P~~--~g~~~~g-- 142 (314)
T 2e6f_A 89 ---------HDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLEL-NL-SC-----------PNV--PGKPQVA-- 142 (314)
T ss_dssp ---------CCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEE-EC-CC-----------CCS--TTCCCGG--
T ss_pred ---------hhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEE-Ec-CC-----------CCC--CCchhhc--
Confidence 01124677777754 456888999999999999 7777 31 11 111 0001111
Q ss_pred CCCccccchHHHHHHHHhhCCCCcEEE--ecCcCCHHHH----HHHHHhC-CCEEEEeh
Q psy16199 695 SGNATRPMGLKAVSSIAKMFPNFPILG--IGGIDSADVA----LQFIQAG-AHAVQICS 746 (842)
Q Consensus 695 sG~~~~p~al~~v~~i~~~~~~ipIi~--~GGI~t~~da----~~~l~~G-A~~Vqv~t 746 (842)
+. .....+.++.+++.+ ++||+. ..++ +.+++ ..+.++| +|+|.+..
T Consensus 143 -~~--~~~~~~ii~~vr~~~-~~Pv~vK~~~~~-~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 143 -YD--FEAMRTYLQQVSLAY-GLPFGVKMPPYF-DIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp -GS--HHHHHHHHHHHHHHH-CSCEEEEECCCC-CHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred -CC--HHHHHHHHHHHHHhc-CCCEEEEECCCC-CHHHHHHHHHHHHhcCCceEEEEeC
Confidence 11 123578888888887 688774 3444 66663 3444589 99987543
No 235
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=97.99 E-value=9.5e-05 Score=81.62 Aligned_cols=148 Identities=14% Similarity=0.088 Sum_probs=112.8
Q ss_pred cceEEEecc-CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMC-TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~-g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+..+... ..+++++.+.++++.+.|++.|.++++++ +++...+++++||+.+ ++|+.++..
T Consensus 134 v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~G~d~~l~vDan 199 (371)
T 2ovl_A 134 VPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRP--------------DLKEDVDRVSALREHLGDSFPLMVDAN 199 (371)
T ss_dssp EEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCS--------------SHHHHHHHHHHHHHHHCTTSCEEEECT
T ss_pred eeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCC--------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 455554321 13789999999988888999999998763 4577789999999986 699999987
Q ss_pred CCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 641 PNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 641 p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..+ .+..++++.+++.|++.|-= | +.+..++..+++++.+ ++|
T Consensus 200 ~~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iP 244 (371)
T 2ovl_A 200 MKWTVDGAIRAARALAPFDLHWIEE-----------------P-----------------TIPDDLVGNARIVRES-GHT 244 (371)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHH-CSC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCC
Confidence 644 47788999999999886621 1 0122377788888887 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
|++.+.+.+.+|+.+++..| +|.||+-..-+ .|+.-..++.+
T Consensus 245 I~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i~~ 287 (371)
T 2ovl_A 245 IAGGENLHTLYDFHNAVRAGSLTLPEPDVSNI-GGYTTFRKVAA 287 (371)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEECCCTTTT-TSHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEeeCcccc-CCHHHHHHHHH
Confidence 99999999999999999965 89999987766 45655555543
No 236
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.99 E-value=2.8e-05 Score=81.01 Aligned_cols=92 Identities=20% Similarity=0.239 Sum_probs=74.4
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
..++.++++.++++|+|.|.+++.... + .+ .+..++.++++++.+ ++||+..
T Consensus 29 ~~d~~~~a~~~~~~Gad~i~v~d~~~~----------------------~--~~---~~~~~~~i~~i~~~~-~ipvi~~ 80 (253)
T 1thf_D 29 SGDPVELGKFYSEIGIDELVFLDITAS----------------------V--EK---RKTMLELVEKVAEQI-DIPFTVG 80 (253)
T ss_dssp TTCHHHHHHHHHHTTCCEEEEEESSCS----------------------S--SH---HHHHHHHHHHHHTTC-CSCEEEE
T ss_pred ccCHHHHHHHHHHcCCCEEEEECCchh----------------------h--cC---CcccHHHHHHHHHhC-CCCEEEe
Confidence 347889999999999999999642110 0 01 334578889999887 7999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
|||.+++++.+++++|||.|.++++.+. .|.++.++.+.+
T Consensus 81 ggI~~~~~~~~~~~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 120 (253)
T 1thf_D 81 GGIHDFETASELILRGADKVSINTAAVE-NPSLITQIAQTF 120 (253)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEESHHHHH-CTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEChHHHh-ChHHHHHHHHHc
Confidence 9999999999999999999999999995 488777776654
No 237
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.98 E-value=5.6e-07 Score=102.98 Aligned_cols=215 Identities=11% Similarity=0.096 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHhcCcEEEeceeecc----cc---cee--ccccccCCCEEEEccCCCCCCCCCCCCCCccccCceehhcc
Q psy16199 52 DAVNFEVELVKDLGVKIECERSLST----RD---ITI--EKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTF 122 (842)
Q Consensus 52 ~~v~~~~~~l~~~gV~i~~~~~v~~----~~---v~~--~~~~~~~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~ 122 (842)
++.....+.+++.|++++.++.+.. .. +.+ +++ .+.+|+||+|||.. ++.++++.+ +...+....
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~-~~~~~~~~~----~~~~tGdgi 193 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGY-SYLYEYSST----QSTNIGDGM 193 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEEEEEEETTEEEEEEETTTEE-ECCCSEEEECCCCC-GGGSSSBSS----CTTCSCHHH
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCC-cccCccccC----CCCCchHHH
Confidence 5666777778888999999885521 11 122 122 34599999999998 554444311 111121111
Q ss_pred hHHHhhcccCCccCCCCCCCCCCCCCc--EEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccccCCHH--------HH
Q psy16199 123 LPRVATSSKKGLCGGCKKESLPILKGT--VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPE--------EV 192 (842)
Q Consensus 123 l~~~~~~~~~~~c~~c~~~~~~~~~~k--VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~~~~~--------~~ 192 (842)
....... +..++. .....+ ++++|+| +++++..+...|.. + +..+.. ..++..++ .+
T Consensus 194 ~~a~~aG-----a~~~d~---e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~-~-v~~~g~-rf~~~~~~~~el~~rd~v 260 (472)
T 2e5v_A 194 AIAFKAG-----TILADM---EFVQFHPTVTSLDGE--VFLLTETLRGEGAQ-I-INENGE-RFLFNYDKRGELAPRDIL 260 (472)
T ss_dssp HHHHHTT-----CCEECT---TCEEEEEEEECGGGC--CEECCTHHHHTTCE-E-EETTCC-CGGGGTCTTGGGSCHHHH
T ss_pred HHHHHcC-----CCEeCC---cceEEEeEEEccCCC--ceeeehhhcCCceE-E-ECCCCC-CCCccCCcccCcCchhHH
Confidence 1111100 001111 222222 4556776 88888888888854 5 444443 23322111 01
Q ss_pred H-----HHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEE-CCEEEEccccCcCChhHHhhc
Q psy16199 193 Q-----LAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLK-ANYIISAFGSTLLDNDVLEAI 266 (842)
Q Consensus 193 ~-----~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~-~D~Vi~a~G~~~~~~~l~~~l 266 (842)
. .+.+.+. ++++... + . . + ..+++ .|.+++++|.. |+ +++...
T Consensus 261 ~~~i~~~~~~~~~-v~ld~~~--~--~--~-----~-----------------~~~~~~~~~~~~~~G~d-p~-~~i~v~ 309 (472)
T 2e5v_A 261 SRAIYIEMLKGHK-VFIDLSK--I--E--D-----F-----------------ERKFPVVAKYLARHGHN-YK-VKIPIF 309 (472)
T ss_dssp HHHHHHHHHHTCC-EEEECTT--C--T--T-----H-----------------HHHCHHHHHHHHHTTCC-TT-SCEECE
T ss_pred HHHHHHHHHhCCc-EEEeccc--h--H--H-----H-----------------HHHhHHHHHHHHHhCcC-cc-cceEee
Confidence 1 1222231 2211110 0 0 0 0 00122 36678888988 44 433221
Q ss_pred CCcccCCCCCeeeCCCCCCCCCCCeEEeccCCC-Cc----hhHHHHHHHHHHHHHHH
Q psy16199 267 KPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN-LS----DTTVESVNDGKTAAWHI 318 (842)
Q Consensus 267 ~gl~~~~~G~i~vd~~~~~Ts~~gVfa~GD~~~-~~----~~~~~A~~~G~~aA~~I 318 (842)
+......|.|.|| +.++|++|||||+|||+. +. .....|..+|...++.+
T Consensus 310 -p~~~~~~GGI~vd-~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a 364 (472)
T 2e5v_A 310 -PAAHFVDGGIRVN-IRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINL 364 (472)
T ss_dssp -EEEEEESCEEECC-TTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHG
T ss_pred -hhhceeCCCeEEC-CCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHH
Confidence 1112235889999 689999999999999965 32 33444555544444444
No 238
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.97 E-value=4.1e-05 Score=79.62 Aligned_cols=166 Identities=16% Similarity=0.113 Sum_probs=100.9
Q ss_pred cceEEEeccCCCH-------hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEE
Q psy16199 564 SILIASIMCTYNK-------DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636 (842)
Q Consensus 564 ~pvi~si~~g~~~-------e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~ 636 (842)
.++|+.+... +| .+..++|+..+++||++|.+.- +.+ .+...+ +.++.+++.+++||.
T Consensus 46 ~~~IaE~k~a-SPskg~i~~~~p~~~A~~~~~~GA~~isvlt-------~~~---~f~G~~----~~l~~i~~~v~lPvl 110 (254)
T 1vc4_A 46 LSVIAEVKRQ-SPSEGLIREVDPVEAALAYARGGARAVSVLT-------EPH---RFGGSL----LDLKRVREAVDLPLL 110 (254)
T ss_dssp CEEEEEECSC-CTTTCCCCSCCHHHHHHHHHHTTCSEEEEEC-------CCS---SSCCCH----HHHHHHHHHCCSCEE
T ss_pred CcEEeeecCC-CcCCCcCCCCCHHHHHHHHHHcCCCEEEEec-------chh---hhccCH----HHHHHHHHhcCCCEE
Confidence 4688888642 22 3458889988999999998831 111 111233 356667778899999
Q ss_pred EEecCChhcHHHHHHHHHHCCCCEEEEecCCCc-----------cccCC----CCCC---------CCCcccCCCccccC
Q psy16199 637 VKLTPNITNITDIAKAAYEGKADGVSAINTVSG-----------LMSLS----ADGN---------PWPAVGTKKLTTYG 692 (842)
Q Consensus 637 vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~-----------~~~~~----~~~~---------~~p~~~~~~~~~~g 692 (842)
.|-- +.+..++ ..+.++|||+|.++.+... ..+++ +.+. .-..++...+.
T Consensus 111 ~kdf--I~d~~qi-~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~--- 184 (254)
T 1vc4_A 111 RKDF--VVDPFML-EEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRD--- 184 (254)
T ss_dssp EESC--CCSHHHH-HHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBC---
T ss_pred ECCc--CCCHHHH-HHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEcccc---
Confidence 8762 2233343 5578899999998765321 00111 0100 00001100000
Q ss_pred CCCCCccccchHHHHHHHHhhCC----CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhH
Q psy16199 693 GVSGNATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVV 756 (842)
Q Consensus 693 G~sG~~~~p~al~~v~~i~~~~~----~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~ 756 (842)
+. .....++...++++.++ ++|+|+.|||.|++|+.++.. ||++|.||++++. +++.-
T Consensus 185 -l~---~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~-~~d~~ 246 (254)
T 1vc4_A 185 -LA---TLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMR-APDLE 246 (254)
T ss_dssp -TT---TCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHT-SSCHH
T ss_pred -Cc---CCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcC-CCCHH
Confidence 11 11233445555555543 689999999999999999999 9999999999994 34433
No 239
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=97.96 E-value=0.00017 Score=80.42 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=114.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCH-HHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDP-EMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~-~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+.+++..+.+++++.+.++++.++|++.|.++. ||- | .++ +...+++++||+.+ ++|+.++..
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv-------G----~~~~~~~~e~v~avr~a~G~d~~l~vDan 201 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI-------G----RGTVAADADQIMAAREGLGPDGDLMVDVG 201 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT-------T----SSCHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC-------C----CCHHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 46666654346899999999998888999999997 552 1 245 77789999999986 699999987
Q ss_pred CCh----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh-hCC
Q psy16199 641 PNI----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK-MFP 715 (842)
Q Consensus 641 p~~----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~-~~~ 715 (842)
..+ .+..++++.+++.|++.|-- | +.+..++..+++++ .+
T Consensus 202 ~~~~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~~- 246 (401)
T 2hzg_A 202 QIFGEDVEAAAARLPTLDAAGVLWLEE-----------------P-----------------FDAGALAAHAALAGRGA- 246 (401)
T ss_dssp TTTTTCHHHHHTTHHHHHHTTCSEEEC-----------------C-----------------SCTTCHHHHHHHHTTCC-
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCccCHHHHHHHHhhCC-
Confidence 655 46788999999999986621 1 01223777888888 77
Q ss_pred CCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 716 NFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 716 ~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
++||++.+.+.+.+++.+++..| +|.|++-..-+ .|+.-..++.+
T Consensus 247 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~~ 292 (401)
T 2hzg_A 247 RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRI-GGLGPAKRVAD 292 (401)
T ss_dssp SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHH-TSHHHHHHHHH
T ss_pred CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchh-CCHHHHHHHHH
Confidence 69999999999999999999866 89999977766 45555544443
No 240
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.96 E-value=0.00022 Score=72.92 Aligned_cols=167 Identities=16% Similarity=0.152 Sum_probs=107.2
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEecc----CCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLS----CPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP 641 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~s----cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p 641 (842)
+-.||.+ .+..++.+.++.+ ++|+|++++.+- .||. .. | ..+++++|+.+++|+-+-+.-
T Consensus 3 i~pSila-~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~-t~-G------------~~~v~~lr~~~~~~~dvhLmv 66 (231)
T 3ctl_A 3 ISPSLMC-MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNL-TL-S------------PFFVSQVKKLATKPLDCHLMV 66 (231)
T ss_dssp EEEBGGG-SCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCC-CB-C------------HHHHHHHHTTCCSCEEEEEES
T ss_pred EEeehhh-CChhhHHHHHHHH-HcCCCEEEEEEEeCccCccc-hh-c------------HHHHHHHHhccCCcEEEEEEe
Confidence 4567764 5777888888888 789999888752 2542 11 1 257888888888888877632
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCC-C--------------ccccCCCCC-CC----C---CcccCC-CccccCCCCCC
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTV-S--------------GLMSLSADG-NP----W---PAVGTK-KLTTYGGVSGN 697 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~-~--------------~~~~~~~~~-~~----~---p~~~~~-~~~~~gG~sG~ 697 (842)
. +...+++.+.++|+|+|+++--. . -..++.++. ++ . +.++.- -.+...|+.|.
T Consensus 67 ~--dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ 144 (231)
T 3ctl_A 67 T--RPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQ 144 (231)
T ss_dssp S--CGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSC
T ss_pred c--CHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCc
Confidence 2 22334455666666666554211 0 001111110 11 0 011100 12345678888
Q ss_pred ccccchHHHHHHHHhhCC----CCcEEEecCcCCHHHHHHHHHhCCCEEEEe-hhhhcc
Q psy16199 698 ATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQIC-SAVQNQ 751 (842)
Q Consensus 698 ~~~p~al~~v~~i~~~~~----~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~-ta~l~~ 751 (842)
.-.|..++.++++++..+ +++|...|||. .+.+.+++.+||+.+-+| |+++..
T Consensus 145 ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~ 202 (231)
T 3ctl_A 145 PFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNH 202 (231)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGG
T ss_pred cccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCC
Confidence 778888998888887652 58999999995 789999999999999999 888853
No 241
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.95 E-value=1.7e-06 Score=99.67 Aligned_cols=154 Identities=13% Similarity=0.029 Sum_probs=88.9
Q ss_pred CCCEEEEccCCCCCCCCCCCCCCccccCceehhcchHHHhhcc-cCCccCCCCCCCCCCCCCcEEEEcCChhHHHHHHHH
Q psy16199 88 GYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSS-KKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSA 166 (842)
Q Consensus 88 ~yd~lVlAtGs~~~~~~~i~~G~~~~~gv~~~~~~l~~~~~~~-~~~~c~~c~~~~~~~~~~kVvVIGgG~~g~e~A~~l 166 (842)
.||.+++++|++ ++.++++ + .+.+++++............ +....+... .......+|+|||||.+|+.+|..|
T Consensus 37 ~~~~l~~~~g~~-~~~~~i~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dVvIVGgG~aGl~aA~~L 111 (497)
T 2bry_A 37 SFQGLCRALGVE-SGGGLSQ-Y-HKIKAQLNYWSAKSLWAKLDKRASQPVYQQ--GQACTNTKCLVVGAGPCGLRAAVEL 111 (497)
T ss_dssp HHHHHHHHHTCC-TTCHHHH-H-HHHHHTCCSTTTHHHHHHHHHHHTSGGGGG--GTTTTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CCCCcEe-e-hhhHHHHHHHHHHHhhhhhhhhhccccccC--ccccCCCCEEEECccHHHHHHHHHH
Confidence 388999999999 7666664 2 23344444322222111100 000000000 0011233499999999999999999
Q ss_pred HHcCCcEEEEEEeecCcc----ccCCH----------------------------HH-----HHHHHhcCcEEecCCCce
Q psy16199 167 LRCGANKVLVVFRKGCTN----IRAVP----------------------------EE-----VQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 167 ~~~G~~~Vtlv~r~~~~~----~~~~~----------------------------~~-----~~~~~~~gV~i~~~~~v~ 209 (842)
++.|.+ |+|+++.+... ....+ .. .+.+.+.|+++++++.++
T Consensus 112 a~~G~~-V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~ 190 (497)
T 2bry_A 112 ALLGAR-VVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFT 190 (497)
T ss_dssp HHTTCE-EEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEE
T ss_pred HHCCCe-EEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 999975 99999875310 00011 11 123445699999999999
Q ss_pred EEEcc--CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVK--DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~--~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
++... ++....|.+.+. .+|+..++.+|.||.|+|..+
T Consensus 191 ~i~~~~~~~~~~~v~~~~~----------~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 191 GLQPPPRKGSGWRAQLQPN----------PPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp EEECCCSTTCCBEEEEESC----------CCHHHHTCCBSEEEECCCTTC
T ss_pred EEEEecCCCCEEEEEEEEC----------CCCCEEEEEcCEEEECCCCCc
Confidence 98742 233334554310 012223588999999999883
No 242
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=97.92 E-value=0.00012 Score=80.40 Aligned_cols=146 Identities=11% Similarity=0.023 Sum_probs=111.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+.+++. ..+++++.+.++++.++|++.|.++++++ +++...+++++||+.+ ++|+.++...
T Consensus 134 vp~~~~~g-~~~~~~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 198 (359)
T 1mdl_A 134 VQAYDSHS-LDGVKLATERAVTAAELGFRAVKTRIGYP--------------ALDQDLAVVRSIRQAVGDDFGIMVDYNQ 198 (359)
T ss_dssp EEEEEECC-SCHHHHHHHHHHHHHHTTCSEEEEECCCS--------------SHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeeecC-CCCHHHHHHHHHHHHHcCCCEEEEecCCC--------------CHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 45655542 24688899999988888999999998652 4677789999999986 6899999876
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~iPI 243 (359)
T 1mdl_A 199 SLDVPAAIKRSQALQQEGVTWIEE-----------------P-----------------TLQHDYEGHQRIQSKL-NVPV 243 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCEEC-----------------C-----------------SCTTCHHHHHHHHHTC-SSCE
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEC-----------------C-----------------CChhhHHHHHHHHHhC-CCCE
Confidence 44 47788999999999886521 1 0122377788888888 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
++.+.+.+.+++.+++..| +|.||+-..-+ .|+.-..++.
T Consensus 244 ~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i~ 284 (359)
T 1mdl_A 244 QMGENWLGPEEMFKALSIGACRLAMPDAMKI-GGVTGWIRAS 284 (359)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCBTTTT-THHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEeecchhh-CCHHHHHHHH
Confidence 9999999999999999965 89999876665 3444444443
No 243
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.91 E-value=3.6e-05 Score=80.11 Aligned_cols=91 Identities=21% Similarity=0.260 Sum_probs=73.8
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+..++++.+.++|+|.|.++.... .+. + .+..++.++++++.+ ++||++.|
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~-----------------------~~~-~---~~~~~~~i~~i~~~~-~iPvi~~G 82 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISA-----------------------THE-E---RAILLDVVARVAERV-FIPLTVGG 82 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCS-----------------------STT-C---HHHHHHHHHHHHTTC-CSCEEEES
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCc-----------------------ccc-C---ccccHHHHHHHHHhC-CCCEEEEC
Confidence 4788999999999999998853210 000 1 334578889999887 79999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
||.+.+++.+++++||+.|.++++++ .+|.++.++.+.+
T Consensus 83 gi~~~~~~~~~~~~Gad~V~lg~~~l-~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 83 GVRSLEDARKLLLSGADKVSVNSAAV-RRPELIRELADHF 121 (252)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHH-HCTHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHcCCCEEEEChHHH-hCcHHHHHHHHHc
Confidence 99999999999999999999999999 4588887776654
No 244
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=97.91 E-value=0.00042 Score=76.72 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=111.3
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~~ 649 (842)
.+++++.+.++++.++|+++|.++++++.. | ...+++...+++++||+.+ ++++.++....+ .+..++
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~------~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~ 219 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPV------S--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALAL 219 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTS------T--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCcc------c--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 578999999998888899999999987531 1 2357888899999999976 689999986544 477889
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCC-H
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDS-A 728 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t-~ 728 (842)
++.+++.|++.|-- | +.+..++..+++++.+ ++||++.+.+.+ .
T Consensus 220 ~~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~ 264 (382)
T 1rvk_A 220 GRGLEKLGFDWIEE-----------------P-----------------MDEQSLSSYKWLSDNL-DIPVVGPESAAGKH 264 (382)
T ss_dssp HHHHHTTTCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCEEECSSCSSHH
T ss_pred HHHHHhcCCCEEeC-----------------C-----------------CChhhHHHHHHHHhhC-CCCEEEeCCccCcH
Confidence 99999999886521 1 1122377788888888 799999999999 9
Q ss_pred HHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 729 DVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 729 ~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
+++.+++..| ++.||+--.-+ -|..-..++.
T Consensus 265 ~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~ 296 (382)
T 1rvk_A 265 WHRAEWIKAGACDILRTGVNDV-GGITPALKTM 296 (382)
T ss_dssp HHHHHHHHTTCCSEEEECHHHH-TSHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEeeCchhc-CCHHHHHHHH
Confidence 9999999976 89999876665 3454444443
No 245
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=97.87 E-value=0.00013 Score=81.11 Aligned_cols=147 Identities=12% Similarity=-0.056 Sum_probs=110.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+.+++....+++++.+.++++.++|++.|+++++++ +++. .+++++||+.+ ++||.++...
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~--------------~~~~-~e~v~avr~a~g~d~~l~vDan~ 217 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPVA--------------DDGP-AAEIANLRQVLGPQAKIAADMHW 217 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGC--------------TTCH-HHHHHHHHHHHCTTSEEEEECCS
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCC--------------ChHH-HHHHHHHHHHhCCCCEEEEECCC
Confidence 46666552124799999999998889999999998752 2356 78899999876 6999999865
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||
T Consensus 218 ~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iPI 262 (388)
T 2nql_A 218 NQTPERALELIAEMQPFDPWFAEA-----------------P-----------------VWTEDIAGLEKVSKNT-DVPI 262 (388)
T ss_dssp CSCHHHHHHHHHHHGGGCCSCEEC-----------------C-----------------SCTTCHHHHHHHHTSC-CSCE
T ss_pred CCCHHHHHHHHHHHhhcCCCEEEC-----------------C-----------------CChhhHHHHHHHHhhC-CCCE
Confidence 44 47788999999999886521 1 1122377788898888 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
++.+.+.+.+++.+++..| +|.||+-..- .|+.-..++.+-
T Consensus 263 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~--GGit~~~~i~~~ 304 (388)
T 2nql_A 263 AVGEEWRTHWDMRARIERCRIAIVQPEMGH--KGITNFIRIGAL 304 (388)
T ss_dssp EECTTCCSHHHHHHHHTTSCCSEECCCHHH--HCHHHHHHHHHH
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEecCCC--CCHHHHHHHHHH
Confidence 9999999999999999876 8999986555 355555555433
No 246
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=97.87 E-value=0.00027 Score=78.25 Aligned_cols=143 Identities=7% Similarity=-0.015 Sum_probs=110.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+..++.. .+++++.+.++++.++|++.|++++++ +++...+++++||+.+ ++|+.++...
T Consensus 135 v~~~~~~~~-~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 135 APMYRVAPQ-RSEAETRAELARHRAAGYRQFQIKVGA---------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EEBCEECCC-SCSHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eeEEEEecC-CCHHHHHHHHHHHHHcCCCEEEEeccC---------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 355555532 478999999999888999999998754 4677889999999987 5899999865
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|+ .|- .| .+ .++..+++++.+ ++||
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE-----------------~P------------------~~-~~~~~~~l~~~~-~iPI 240 (379)
T 2rdx_A 199 GWRVDNAIRLARATRDLDY-ILE-----------------QP------------------CR-SYEECQQVRRVA-DQPM 240 (379)
T ss_dssp CSCHHHHHHHHHHTTTSCC-EEE-----------------CC------------------SS-SHHHHHHHHTTC-CSCE
T ss_pred CCCHHHHHHHHHHHHhCCe-EEe-----------------CC------------------cC-CHHHHHHHHhhC-CCCE
Confidence 44 467788888988887 541 01 01 377788898888 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
++.+.+.+.+++.+++..| +|.|++-..-+ .|+.-..++.+
T Consensus 241 ~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~~ 282 (379)
T 2rdx_A 241 KLDECVTGLHMAQRIVADRGAEICCLKISNL-GGLSKARRTRD 282 (379)
T ss_dssp EECTTCCSHHHHHHHHHHTCCSEEEEETTTT-TSHHHHHHHHH
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHH
Confidence 9999999999999999976 99999987776 45555555543
No 247
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.87 E-value=4.2e-05 Score=99.32 Aligned_cols=173 Identities=13% Similarity=0.046 Sum_probs=111.7
Q ss_pred cceEEEeccCCCHhH---HHHHHHHHhhcCcCE--EEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEE
Q psy16199 564 SILIASIMCTYNKDD---WLELSKKTEKAGADA--LELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK 638 (842)
Q Consensus 564 ~pvi~si~~g~~~e~---~~~~a~~~~~agaD~--ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vK 638 (842)
+|+-++++. .++.. ..++++.+.+.|+.. +.+..+.|. ++...++++.+ +++++..
T Consensus 645 ~~~gvN~~~-~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~--------------~~~~~~~i~~l----G~~vi~~ 705 (2051)
T 2uv8_G 645 STFGINLIY-VNPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPS--------------LEVASEYIETL----GLKYLGL 705 (2051)
T ss_dssp CCEEEEEET-TCTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCC--------------HHHHHHHHHHS----CCSCEEE
T ss_pred CceEEEEee-cChhhhhhhHHHHHHHHHcCCCcceEEecCCCCc--------------hhhHHHHHHHc----CCEEEEe
Confidence 588888764 23321 136667666778766 888765553 23333444433 8888875
Q ss_pred ecCChhcHHHHHHHHHHCCCCEE-EEecCCCccccCCCCCCCCCcccCCCccccCCCCCC-ccccchHHHHHHHHhhCCC
Q psy16199 639 LTPNITNITDIAKAAYEGKADGV-SAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGN-ATRPMGLKAVSSIAKMFPN 716 (842)
Q Consensus 639 l~p~~~~~~~~a~~~~~~G~d~i-~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~-~~~p~al~~v~~i~~~~~~ 716 (842)
.... ......+..+.++|+|++ ++.=+ -.+.||+-|. .+....+..+.++++.+ +
T Consensus 706 ~~~~-~~a~~~~~~~~~~g~d~~ii~~~~---------------------G~eaGGH~g~~d~~~~~l~l~~~v~~~~-~ 762 (2051)
T 2uv8_G 706 KPGS-IDAISQVINIAKAHPNFPIALQWT---------------------GGRGGGHHSFEDAHTPMLQMYSKIRRHP-N 762 (2051)
T ss_dssp CCCS-HHHHHHHHHHHHHSTTSCEEEEEC---------------------CSSCSEECCSCCSSHHHHHHHHHHTTCT-T
T ss_pred cCch-HHHHHHHHHHHHhCCCceeEEEEE---------------------ccCcCCCCCcccccccHHHHHHHHHhcC-C
Confidence 5543 344556677888999994 33111 1245676554 33344567788998887 8
Q ss_pred CcEEEecCcCCHHHHHHHH-----------HhCCCEEEEehhhhccCc-hhHHHHHHHHHHHHHhcCCCccccCCCC
Q psy16199 717 FPILGIGGIDSADVALQFI-----------QAGAHAVQICSAVQNQDF-TVVDDYITGLQTLLYLKSTQLKGWDGQS 781 (842)
Q Consensus 717 ipIi~~GGI~t~~da~~~l-----------~~GA~~Vqv~ta~l~~gp-~~~~~i~~~l~~~m~~~g~~i~~~~~~~ 781 (842)
+|||+.|||.+++++..+| ++||++|||||.||.--- ..-..+++ .+++..+.+-++|.+.+
T Consensus 763 ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~K~---~iv~a~~~d~~~w~~~~ 836 (2051)
T 2uv8_G 763 IMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDAKK---CIAACTGVPDDKWEQTY 836 (2051)
T ss_dssp BCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHHHH---HHHTCCCCCGGGGGGGG
T ss_pred ceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCHHHHH---HHHhCCCCcccchhhcc
Confidence 9999999999999999999 899999999999994321 11122222 23444555446787664
No 248
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.86 E-value=0.00026 Score=71.23 Aligned_cols=138 Identities=17% Similarity=0.112 Sum_probs=90.0
Q ss_pred cceEEEeccCCC-HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC
Q psy16199 564 SILIASIMCTYN-KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~-~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~ 642 (842)
.|+++-++. ++ ++.+. +.+.++|||+|.+|... ..+.+.++++.+++. ++++.+=+. +
T Consensus 54 ~~i~~~l~~-~di~~~~~---~~a~~~Gad~v~vh~~~---------------~~~~~~~~~~~~~~~-g~~~gv~~~-s 112 (207)
T 3ajx_A 54 KIVFADMKT-MDAGELEA---DIAFKAGADLVTVLGSA---------------DDSTIAGAVKAAQAH-NKGVVVDLI-G 112 (207)
T ss_dssp SEEEEEEEE-CSCHHHHH---HHHHHTTCSEEEEETTS---------------CHHHHHHHHHHHHHH-TCEEEEECT-T
T ss_pred CeEEEEEEe-cCccHHHH---HHHHhCCCCEEEEeccC---------------ChHHHHHHHHHHHHc-CCceEEEEe-c
Confidence 688888874 46 66644 45556799999997522 234555666666653 556655442 2
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
.++..+.++.+.+.|+|.|.+.-+.. ++..|. .+.. +.++++++. ++||++.
T Consensus 113 ~~~p~~~~~~~~~~g~d~v~~~~~~~-----------------------~~~~g~--~~~~-~~i~~~~~~--~~pi~v~ 164 (207)
T 3ajx_A 113 IEDKATRAQEVRALGAKFVEMHAGLD-----------------------EQAKPG--FDLN-GLLAAGEKA--RVPFSVA 164 (207)
T ss_dssp CSSHHHHHHHHHHTTCSEEEEECCHH-----------------------HHTSTT--CCTH-HHHHHHHHH--TSCEEEE
T ss_pred CCChHHHHHHHHHhCCCEEEEEeccc-----------------------ccccCC--CchH-HHHHHhhCC--CCCEEEE
Confidence 23444556677788999985522110 111221 1333 556665553 5899999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
|||+ ++++.+++.+||+.|-++|+++..
T Consensus 165 GGI~-~~~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 165 GGVK-VATIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp SSCC-GGGHHHHHHTTCSEEEESHHHHTS
T ss_pred CCcC-HHHHHHHHHcCCCEEEEeeeccCC
Confidence 9997 889999999999999999999953
No 249
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.82 E-value=2e-05 Score=81.61 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=71.2
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+..++++.+++.|+|.|.+++... .+.. .+..++.+++++ .+ ++||+.+|
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~----------------------~~~~-----~~~~~~~i~~i~-~~-~ipvi~~G 80 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSN----------------------AIEN-----SGENLPVLEKLS-EF-AEHIQIGG 80 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHH----------------------HHHC-----CCTTHHHHHHGG-GG-GGGEEEES
T ss_pred cCHHHHHHHHHHcCCCEEEEecccc----------------------cccC-----CchhHHHHHHHH-hc-CCcEEEEC
Confidence 4788999999999999999964211 0111 123378888888 76 79999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
||.+.+++.+++.+||+.|.++++++. .|+++.++ +.+
T Consensus 81 gi~~~~~~~~~~~~Gad~V~lg~~~l~-~p~~~~~~-~~~ 118 (241)
T 1qo2_A 81 GIRSLDYAEKLRKLGYRRQIVSSKVLE-DPSFLKSL-REI 118 (241)
T ss_dssp SCCSHHHHHHHHHTTCCEEEECHHHHH-CTTHHHHH-HTT
T ss_pred CCCCHHHHHHHHHCCCCEEEECchHhh-ChHHHHHH-HHc
Confidence 999999999999999999999999995 58888777 543
No 250
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.76 E-value=0.0001 Score=76.33 Aligned_cols=91 Identities=21% Similarity=0.279 Sum_probs=73.5
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+..++++.+.+.|+|+|.+++.... +. -.+..++.++++++.+ ++||+++|
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~-----------------------~~----~~~~~~~~i~~i~~~~-~ipvi~~g 84 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAA-----------------------PE----GRATFIDSVKRVAEAV-SIPVLVGG 84 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCC-----------------------TT----THHHHHHHHHHHHHHC-SSCEEEES
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcc-----------------------cc----CCcccHHHHHHHHHhc-CCCEEEEC
Confidence 47889999999999999999653110 00 1234578889999988 79999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
||.+.+++.+++++||+.|.+++.++ .+|.++.++.+.+
T Consensus 85 ~i~~~~~~~~~~~~Gad~V~i~~~~~-~~~~~~~~~~~~~ 123 (253)
T 1h5y_A 85 GVRSLEDATTLFRAGADKVSVNTAAV-RNPQLVALLAREF 123 (253)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESHHHH-HCTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEChHHh-hCcHHHHHHHHHc
Confidence 99999999999999999999999998 4588887776553
No 251
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.75 E-value=7.3e-05 Score=76.08 Aligned_cols=146 Identities=16% Similarity=0.150 Sum_probs=95.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCC----------CCCCCcccCCCCHHHHHH-----------
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGM----------GERGMGLACGQDPEMVRN----------- 622 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~----------~~~~~G~~~~~~~~~~~~----------- 622 (842)
.++|+-+- +.++++..++++.+.+.|++.||+.+..|+.. ..--.|..--.+.+.++.
T Consensus 34 ~~vv~Vir-~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 34 LKVIPVIA-IDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp HCEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC
T ss_pred CCEEEEEE-cCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe
Confidence 46777665 57899999999999999999999988766410 000011111122333322
Q ss_pred ------HHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCC
Q psy16199 623 ------ISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG 696 (842)
Q Consensus 623 ------ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG 696 (842)
++++.++. ++|++.=+ ....+ +..+.++|+|.|.++-+ ...|
T Consensus 113 P~~~~~vi~~~~~~-gi~~ipGv----~TptE-i~~A~~~Gad~vK~FPa----------------------~~~g---- 160 (232)
T 4e38_A 113 PGFNPNTVRACQEI-GIDIVPGV----NNPST-VEAALEMGLTTLKFFPA----------------------EASG---- 160 (232)
T ss_dssp SSCCHHHHHHHHHH-TCEEECEE----CSHHH-HHHHHHTTCCEEEECST----------------------TTTT----
T ss_pred CCCCHHHHHHHHHc-CCCEEcCC----CCHHH-HHHHHHcCCCEEEECcC----------------------cccc----
Confidence 22222222 44444322 23333 34557788888877210 0011
Q ss_pred CccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhh
Q psy16199 697 NATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQ 749 (842)
Q Consensus 697 ~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l 749 (842)
...+++.++..++++|++..||| +.+++.+++++||.++.+||.+.
T Consensus 161 ------G~~~lkal~~p~p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 161 ------GISMVKSLVGPYGDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp ------HHHHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGG
T ss_pred ------CHHHHHHHHHHhcCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchhc
Confidence 26888999998888999999999 58999999999999998898887
No 252
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=97.75 E-value=0.00054 Score=75.95 Aligned_cols=145 Identities=11% Similarity=0.029 Sum_probs=111.6
Q ss_pred ceEEEecc-CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 565 ILIASIMC-TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 565 pvi~si~~-g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
|+.+++.. ..+++++.+.++.+.+.|++.|.++++| +++.-.+++++||+.+ ++|+.++...
T Consensus 140 ~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~---------------~~~~d~~~v~avR~a~g~d~~l~vDan~ 204 (389)
T 3ozy_A 140 RAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR---------------APRKDAANLRAMRQRVGADVEILVDANQ 204 (389)
T ss_dssp EEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC---------------CHHHHHHHHHHHHHHcCCCceEEEECCC
Confidence 55666522 4689999999998888899999999765 4677788999999986 6899999866
Q ss_pred Chh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHH-hhCCCCc
Q psy16199 642 NIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIA-KMFPNFP 718 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~-~~~~~ip 718 (842)
.++ +..++++.+++.|++.|-= | +.|..++..++++ +.+ ++|
T Consensus 205 ~~~~~~A~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~~-~iP 249 (389)
T 3ozy_A 205 SLGRHDALAMLRILDEAGCYWFEE-----------------P-----------------LSIDDIEGHRILRAQGT-PVR 249 (389)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEES-----------------C-----------------SCTTCHHHHHHHHTTCC-SSE
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHhcCC-CCC
Confidence 544 6778999999999887731 1 1122367778888 877 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
|++.+.+.+.+|+.+++..| +|.||+--.-. -|..-..++.
T Consensus 250 Ia~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~ia 291 (389)
T 3ozy_A 250 IATGENLYTRNAFNDYIRNDAIDVLQADASRA-GGITEALAIS 291 (389)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCTTTS-SCHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc-CCHHHHHHHH
Confidence 99999999999999999965 89999877666 3454444443
No 253
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.75 E-value=0.00032 Score=72.23 Aligned_cols=50 Identities=28% Similarity=0.407 Sum_probs=43.0
Q ss_pred cchHHHHHHHHhhC-CCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 701 PMGLKAVSSIAKMF-PNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 701 p~al~~v~~i~~~~-~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+..++.++++++.. .++||++.||| +.+++.+.+.+||++|.|+++++..
T Consensus 175 ~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a 225 (243)
T 3o63_A 175 APGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSA 225 (243)
T ss_dssp CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTC
T ss_pred hhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 45688888888763 27999999999 9999999999999999999999953
No 254
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=97.75 E-value=0.00044 Score=76.77 Aligned_cols=147 Identities=11% Similarity=0.049 Sum_probs=110.6
Q ss_pred cceEE--EeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEe
Q psy16199 564 SILIA--SIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKL 639 (842)
Q Consensus 564 ~pvi~--si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl 639 (842)
.|+.+ .+..+.+++++.+.++++.++|++.|+|+++. ..++...+++++||+.+ ++||.++.
T Consensus 136 vp~~~~g~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~--------------~~~~~~~e~v~avR~a~G~d~~l~vDa 201 (391)
T 2qgy_A 136 VPIYATCWSDLKKDTNDYLRQIEKFYGKKYGGIKIYPML--------------DSLSISIQFVEKVREIVGDELPLMLDL 201 (391)
T ss_dssp EEEEEECCCSSCCCHHHHHHHHHHHHHTTCSCEEECCCC--------------SSHHHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred cceEEecccCCCCCHHHHHHHHHHHHHcCCCEEEEccCC--------------ChHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 35554 23213578999999999888899999998541 11577889999999976 69999998
Q ss_pred cCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 640 TPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 640 ~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
...+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++
T Consensus 202 n~~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~i 246 (391)
T 2qgy_A 202 AVPEDLDQTKSFLKEVSSFNPYWIEE-----------------P-----------------VDGENISLLTEIKNTF-NM 246 (391)
T ss_dssp CCCSCHHHHHHHHHHHGGGCCSEEEC-----------------S-----------------SCTTCHHHHHHHHHHC-SS
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEeC-----------------C-----------------CChhhHHHHHHHHhhC-CC
Confidence 6644 47788999999999886621 1 1122377788888888 79
Q ss_pred cEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 718 PILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
||++.+.+.+.+++.+++..| ++.|++-..-+ .|+.-..++.
T Consensus 247 PIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~ 289 (391)
T 2qgy_A 247 KVVTGEKQSGLVHFRELISRNAADIFNPDISGM-GGLIDIIEIS 289 (391)
T ss_dssp CEEECTTCCSHHHHHHHHHTTCCSEECCBTTTS-SCHHHHHHHH
T ss_pred CEEEcCCcCCHHHHHHHHHcCCCCEEEECcchh-CCHHHHHHHH
Confidence 999999999999999999976 89999876655 4555444443
No 255
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.72 E-value=9.3e-05 Score=76.58 Aligned_cols=89 Identities=11% Similarity=0.102 Sum_probs=71.4
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
++.++++.++++|++.|.+..-- +...+ .+.. +.++++++.+ ++|++..||
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d------------------------~~~~~---~~~~-~~i~~i~~~~-~ipv~v~gg 82 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLD------------------------AAFGR---GSNH-ELLAEVVGKL-DVQVELSGG 82 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHH------------------------HHTTS---CCCH-HHHHHHHHHC-SSEEEEESS
T ss_pred CHHHHHHHHHHcCCCEEEEEcCc------------------------ccccC---CChH-HHHHHHHHhc-CCcEEEECC
Confidence 78899999999999999994310 00111 1223 7888999988 799999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
|.+++++.+++.+||+.|.++++++. .|+++.++.+.+
T Consensus 83 i~~~~~~~~~l~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 120 (244)
T 2y88_A 83 IRDDESLAAALATGCARVNVGTAALE-NPQWCARVIGEH 120 (244)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHH-CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECchHhh-ChHHHHHHHHHc
Confidence 99999999999999999999999995 488777776654
No 256
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.70 E-value=8.2e-05 Score=86.29 Aligned_cols=95 Identities=20% Similarity=0.217 Sum_probs=76.9
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.++.++|+.+.+.|+++|++.|- .+..+|+..++..++.++++++.+ .+||+..|
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl------------------------~~~~~~~~~~~~~~~~i~~i~~~~-~ipi~vgG 334 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNI------------------------TSFRDCPLKDTPMLEVLKQAAKTV-FVPLTVGG 334 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEE------------------------C---CCCGGGCHHHHHHHHHTTTC-CSCEEEES
T ss_pred CCHHHHHHHHHHcCCCEEEEEeC------------------------CccccccCCCchHHHHHHHHHhhC-CCcEEEeC
Confidence 48899999999999999999662 123445555777899999999988 79999999
Q ss_pred CcCCH-----------HHHHHHHHhCCCEEEEehhhhcc------------CchhHHHHHHHH
Q psy16199 724 GIDSA-----------DVALQFIQAGAHAVQICSAVQNQ------------DFTVVDDYITGL 763 (842)
Q Consensus 724 GI~t~-----------~da~~~l~~GA~~Vqv~ta~l~~------------gp~~~~~i~~~l 763 (842)
||++. +++.+++.+||+.|.|+|+.+.+ +|.+++++.+..
T Consensus 335 GIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 397 (555)
T 1jvn_A 335 GIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAY 397 (555)
T ss_dssp SCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHH
T ss_pred ccccchhcccccchHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHh
Confidence 99998 55999999999999999999753 367777776643
No 257
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.70 E-value=9.9e-05 Score=74.62 Aligned_cols=165 Identities=13% Similarity=0.085 Sum_probs=96.1
Q ss_pred HHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCE
Q psy16199 581 ELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADG 660 (842)
Q Consensus 581 ~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~ 660 (842)
+.++.+.+.|+++|++-. + + .+.+.+.++++.+.+..+++++|- . + ++.+.+.|+|+
T Consensus 17 ~~~~~a~~~Gv~~v~lr~--k------~------~~~~~~~~~i~~l~~~~~~~livn--d---~----~~~A~~~gadg 73 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRK--P------E------TPAMYSERLLTLIPEKYHRRIVTH--E---H----FYLKEEFNLMG 73 (210)
T ss_dssp HHHHHHHHTTCCEEEECC--S------S------CCHHHHHHHHHHSCGGGGGGEEES--S---C----TTHHHHTTCSE
T ss_pred HHHHHHHHCCCCEEEEcc--C------C------CCHHHHHHHHHHHHHHhCCeEEEe--C---C----HHHHHHcCCCE
Confidence 556666677999999962 1 1 345566667777776677898872 1 1 36677888999
Q ss_pred EEEecCCCcccc-------CCCCCC---CCCcccCCCccccCCC--CC-Cc--cccchHHHHHHHHhhC-CCCcEEEecC
Q psy16199 661 VSAINTVSGLMS-------LSADGN---PWPAVGTKKLTTYGGV--SG-NA--TRPMGLKAVSSIAKMF-PNFPILGIGG 724 (842)
Q Consensus 661 i~v~nt~~~~~~-------~~~~~~---~~p~~~~~~~~~~gG~--sG-~~--~~p~al~~v~~i~~~~-~~ipIi~~GG 724 (842)
|.+......... ....+. ..-..+- ..-..|.+ +. ++ -.+..+..++++++.+ .++||++.||
T Consensus 74 vhl~~~~~~~~~~~~~~ig~s~~t~~e~~~A~~Ga-Dyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGG 152 (210)
T 3ceu_A 74 IHLNARNPSEPHDYAGHVSCSCHSVEEVKNRKHFY-DYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGG 152 (210)
T ss_dssp EECCSSSCSCCTTCCSEEEEEECSHHHHHTTGGGS-SEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESS
T ss_pred EEECccccccccccCCEEEEecCCHHHHHHHhhCC-CEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECC
Confidence 877433211000 000000 0000000 00000110 00 00 0235578888888773 3799999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhhcc-CchhHHHHHHHHHHHHHhc
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQNQ-DFTVVDDYITGLQTLLYLK 770 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l~~-gp~~~~~i~~~l~~~m~~~ 770 (842)
|. ++++.+++.+||++|.++|+++.. +|.-.+++++.++.|...+
T Consensus 153 I~-~~nv~~~~~~Ga~gVav~s~i~~~~d~~~~~~~~~~v~~~~~~~ 198 (210)
T 3ceu_A 153 IN-EDNLLEIKDFGFGGAVVLGDLWNKFDACLDQNYLAVIEHFKKLK 198 (210)
T ss_dssp CC-TTTHHHHHHTTCSEEEESHHHHTTCCTTTSSCCHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHhCCCEEEEhHHhHcCCCHHHHHHHHHHHHHHHHHH
Confidence 96 999999999999999999999843 2433344555555544433
No 258
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.70 E-value=0.00052 Score=70.72 Aligned_cols=157 Identities=13% Similarity=0.054 Sum_probs=88.2
Q ss_pred cceEEEeccCCCH-hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccC---CCCHHHHHHHHHHHHhhCCccEEEEe
Q psy16199 564 SILIASIMCTYNK-DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLAC---GQDPEMVRNISLWVRSSVKIPFFVKL 639 (842)
Q Consensus 564 ~pvi~si~~g~~~-e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~---~~~~~~~~~ii~~v~~~~~~Pv~vKl 639 (842)
.||++++. +.+| -.+-...+.+.++|+.++ +|++.--... +.+...+ +...+...++++..++. ++-.++ +
T Consensus 95 iPV~Agv~-~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglid-G~fr~~LEE~gm~~~~eve~I~~A~~~-gL~Ti~-~ 169 (286)
T 2p10_A 95 TPVLAGVN-GTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLID-GLFRQNLEETGMSYAQEVEMIAEAHKL-DLLTTP-Y 169 (286)
T ss_dssp SCEEEEEC-TTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCC-HHHHHHHHHTTCCHHHHHHHHHHHHHT-TCEECC-E
T ss_pred CCEEEEEC-CcCCCcCHHHHHHHHHHhCCceE-EECCCccccc-chhhhhHhhcCCCHHHHHHHHHHHHHC-CCeEEE-e
Confidence 79999975 5554 245555588888899999 9984221111 0011111 12344445555555543 322211 1
Q ss_pred cCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcc---cc----chHHHHHHHHh
Q psy16199 640 TPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT---RP----MGLKAVSSIAK 712 (842)
Q Consensus 640 ~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~---~p----~al~~v~~i~~ 712 (842)
..+ .+-|+++.++|+|.|.+.=. -..||+-|... .. ...+.+..+++
T Consensus 170 v~~----~eeA~amA~agpDiI~~h~g----------------------lT~gglIG~~~avs~~~~~e~i~~i~~a~~~ 223 (286)
T 2p10_A 170 VFS----PEDAVAMAKAGADILVCHMG----------------------LTTGGAIGARSGKSMDDCVSLINECIEAART 223 (286)
T ss_dssp ECS----HHHHHHHHHHTCSEEEEECS----------------------CC---------CCCHHHHHHHHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHcCCCEEEECCC----------------------CCCCCcccCCCcccHHHhHHHHHHHHHHHHH
Confidence 222 34467778999999998422 12233322211 11 12233333444
Q ss_pred hCCCCcEE-EecCcCCHHHHHHHHHh--CCCEEEEehhhhcc
Q psy16199 713 MFPNFPIL-GIGGIDSADVALQFIQA--GAHAVQICSAVQNQ 751 (842)
Q Consensus 713 ~~~~ipIi-~~GGI~t~~da~~~l~~--GA~~Vqv~ta~l~~ 751 (842)
.-|++.|+ +.|||.+++|+..++.. |++++-.+|++..-
T Consensus 224 vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~ 265 (286)
T 2p10_A 224 IRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERL 265 (286)
T ss_dssp HCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHH
T ss_pred hCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcC
Confidence 44665555 45599999999999998 99999999999954
No 259
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.70 E-value=0.00063 Score=68.53 Aligned_cols=132 Identities=19% Similarity=0.117 Sum_probs=85.1
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCC--
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN-- 642 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~-- 642 (842)
+++.-+-.+.-.+.-...++.+.++|||+|.+|.... . +.++.+++...+++...++..
T Consensus 53 ~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g---------------~----~~i~~~~~~~gv~vl~~t~~~~~ 113 (208)
T 2czd_A 53 EIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVG---------------R----DSVMAVKELGEIIMVVEMSHPGA 113 (208)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC---------------H----HHHHHHHTTSEEEEECCCCSGGG
T ss_pred EEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCC---------------H----HHHHHHHHhCCcEEEEecCCcch
Confidence 4444443221133334455556678999999985321 1 225555555455555554321
Q ss_pred ----hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 643 ----ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 643 ----~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
.+.+..+++++.+.|++|++++.+ ..+.++++++..+.-+
T Consensus 114 ~~~~~~~v~~~~~~a~~~G~~G~~~~~~------------------------------------~~~~i~~lr~~~~~~~ 157 (208)
T 2czd_A 114 LEFINPLTDRFIEVANEIEPFGVIAPGT------------------------------------RPERIGYIRDRLKEGI 157 (208)
T ss_dssp GTTTGGGHHHHHHHHHHHCCSEEECCCS------------------------------------STHHHHHHHHHSCTTC
T ss_pred hhHHHHHHHHHHHHHHHhCCcEEEECCC------------------------------------ChHHHHHHHHhCCCCe
Confidence 334667888999999999987432 1233456666664445
Q ss_pred EEEecCcCC-HHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 719 ILGIGGIDS-ADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 719 Ii~~GGI~t-~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
++..|||.. +.++.+++.+||+.+-+||+++..
T Consensus 158 ~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 158 KILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA 191 (208)
T ss_dssp EEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS
T ss_pred EEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC
Confidence 779999975 448999999999999999999954
No 260
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.69 E-value=9.3e-05 Score=76.62 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=71.3
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
++.++++.++++|+|.|.+..-- +...+ .+.. +.++++++.+ ++|++..||
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d------------------------~~~~~---~~~~-~~i~~i~~~~-~ipv~v~gg 83 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLD------------------------AAFGT---GDNR-ALIAEVAQAM-DIKVELSGG 83 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHH------------------------HHHTS---CCCH-HHHHHHHHHC-SSEEEEESS
T ss_pred CHHHHHHHHHHcCCCEEEEecCc------------------------hhhcC---CChH-HHHHHHHHhc-CCcEEEECC
Confidence 78899999999999999985310 00111 2233 7788899888 799999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
|.+++++.+++.+||+.|.+++..+. .|.++.++.+.+
T Consensus 84 I~~~~~~~~~l~~Gad~V~lg~~~l~-~p~~~~~~~~~~ 121 (244)
T 1vzw_A 84 IRDDDTLAAALATGCTRVNLGTAALE-TPEWVAKVIAEH 121 (244)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHH-CHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEECchHhh-CHHHHHHHHHHc
Confidence 99999999999999999999999995 488777776654
No 261
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.67 E-value=0.00062 Score=71.91 Aligned_cols=164 Identities=14% Similarity=0.021 Sum_probs=107.7
Q ss_pred ccceEEEeccCC--CHhHHHHHHHHHhhcCcCEEEEeccC-CCCCCCCCCcccCCCCHHHHHHHHHHHHhh-CCccEEEE
Q psy16199 563 LSILIASIMCTY--NKDDWLELSKKTEKAGADALELNLSC-PHGMGERGMGLACGQDPEMVRNISLWVRSS-VKIPFFVK 638 (842)
Q Consensus 563 ~~pvi~si~~g~--~~e~~~~~a~~~~~agaD~ielN~sc-P~~~~~~~~G~~~~~~~~~~~~ii~~v~~~-~~~Pv~vK 638 (842)
+.||++-+-.|+ +++...+.+++++++|+++|.|.=++ |..++..+ |..+ .+.+...+-+++++++ ...++.|.
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~-gk~L-~p~~~~~~~I~Aa~~a~~~~~~~i~ 155 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRP-NKAI-VSKEEMVDRIRAAVDAKTDPDFVIM 155 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSS-SCCB-CCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCC-CCcc-CCHHHHHHHHHHHHHhccCCCcEEE
Confidence 379999985554 68999999999999999999999775 33333332 3344 3444444444444444 34555554
Q ss_pred ecCC------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh
Q psy16199 639 LTPN------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK 712 (842)
Q Consensus 639 l~p~------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~ 712 (842)
-.-+ +++..+-|+++.++|||.|.+-. ....+.++++.+
T Consensus 156 aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~-----------------------------------~~~~~~~~~i~~ 200 (295)
T 1xg4_A 156 ARTDALAVEGLDAAIERAQAYVEAGAEMLFPEA-----------------------------------ITELAMYRQFAD 200 (295)
T ss_dssp EEECCHHHHCHHHHHHHHHHHHHTTCSEEEETT-----------------------------------CCSHHHHHHHHH
T ss_pred EecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeC-----------------------------------CCCHHHHHHHHH
Confidence 4322 35778889999999999999911 012677888888
Q ss_pred hCCCCcEEEecCc--CCH-HHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 713 MFPNFPILGIGGI--DSA-DVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 713 ~~~~ipIi~~GGI--~t~-~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
.+ ++|+++|.-+ .++ -...++-.+|.+.|.++.+++.. ...-+.+.++.+.
T Consensus 201 ~~-~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~a---a~~a~~~~~~~i~ 254 (295)
T 1xg4_A 201 AV-QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRA---MNRAAEHVYNVLR 254 (295)
T ss_dssp HH-CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHH---HHHHHHHHHHHHH
T ss_pred Hc-CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHHH---HHHHHHHHHHHHH
Confidence 88 6999886543 222 23445566999999999988843 3334444444433
No 262
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.64 E-value=0.0007 Score=69.90 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=96.3
Q ss_pred eEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC-
Q psy16199 566 LIASIMCTY-NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN- 642 (842)
Q Consensus 566 vi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~- 642 (842)
+-+++.+|. +.++..+ . .++|||-+-+|-. ...+|+++.++.+..-... -+-+=+|...+
T Consensus 76 ~pl~vGGGIrs~e~~~~---~-l~~GadkVii~t~-------------a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~ 138 (243)
T 4gj1_A 76 VNLQVGGGIRSKEEVKA---L-LDCGVKRVVIGSM-------------AIKDATLCLEILKEFGSEAIVLALDTILKEDY 138 (243)
T ss_dssp SEEEEESSCCCHHHHHH---H-HHTTCSEEEECTT-------------TTTCHHHHHHHHHHHCTTTEEEEEEEEESSSE
T ss_pred CCeEeccccccHHHHHH---H-HHcCCCEEEEccc-------------cccCCchHHHHHhcccCceEEEEEEEEeCCCC
Confidence 344555453 3444333 3 3469999999731 1378999888887664321 01111221111
Q ss_pred -----------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHH
Q psy16199 643 -----------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIA 711 (842)
Q Consensus 643 -----------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~ 711 (842)
-.++.++++.+.+.|+..|.+++ ++- -|-++|+. +++++.++
T Consensus 139 ~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~-------Id~---------------DGt~~G~d-----~~l~~~l~ 191 (243)
T 4gj1_A 139 VVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTD-------ISK---------------DGTMQGVN-----VRLYKLIH 191 (243)
T ss_dssp EEC--------CCBHHHHHHHHHTTTCCEEEEEE-------TTC--------------------CCC-----HHHHHHHH
T ss_pred EEEecCceecccchHHHHHHHHhhcCCcEEEeee-------ecc---------------cccccCCC-----HHHHHHHH
Confidence 12578999999999999999853 111 23344543 78888999
Q ss_pred hhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHH
Q psy16199 712 KMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 712 ~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
+.++++|||++||+.+.+|+.+ +..++++|.++++++ .|---+++.++
T Consensus 192 ~~~~~ipviasGGv~~~~Dl~~-l~~~~~gvivg~Al~-~g~i~l~ea~~ 239 (243)
T 4gj1_A 192 EIFPNICIQASGGVASLKDLEN-LKGICSGVIVGKALL-DGVFSVEEGIR 239 (243)
T ss_dssp HHCTTSEEEEESCCCSHHHHHH-TTTTCSEEEECHHHH-TTSSCHHHHHH
T ss_pred HhcCCCCEEEEcCCCCHHHHHH-HHccCchhehHHHHH-CCCCCHHHHHH
Confidence 8887799999999999999976 467899999999987 45433444443
No 263
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=97.63 E-value=0.001 Score=73.50 Aligned_cols=144 Identities=13% Similarity=0.077 Sum_probs=108.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+..++. ..+++++.+.++++.++|++.|.+++++| +++...+++++||+.+ ++|+.++...
T Consensus 135 v~~~~~~~-~~~~e~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 199 (378)
T 2qdd_A 135 VPINSSIS-TGTPDQMLGLIAEAAAQGYRTHSAKIGGS--------------DPAQDIARIEAISAGLPDGHRVTFDVNR 199 (378)
T ss_dssp EEBEEEEC-SCCHHHHHHHHHHHHHHTCCEEEEECCSS--------------CHHHHHHHHHHHHHSCCTTCEEEEECTT
T ss_pred CceEEEec-CCCHHHHHHHHHHHHHHhhhheeecCCCC--------------ChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45555553 25789999999988888999999998765 4677789999999987 6899999865
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.++ .|+ .| + .| .+ .++..+++++.+ ++||
T Consensus 200 ~~~~~~a~~~~~~l~-~~i-~i--------------E---qP------------------~~-d~~~~~~l~~~~-~iPI 240 (378)
T 2qdd_A 200 AWTPAIAVEVLNSVR-ARD-WI--------------E---QP------------------CQ-TLDQCAHVARRV-ANPI 240 (378)
T ss_dssp CCCHHHHHHHHTSCC-CCC-EE--------------E---CC------------------SS-SHHHHHHHHTTC-CSCE
T ss_pred CCCHHHHHHHHHHhC-CCc-EE--------------E---cC------------------CC-CHHHHHHHHHhC-CCCE
Confidence 44 35566666665 555 32 1 01 11 377788888887 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
++.+.+.+.+++.+++..| +|.||+-..-+ .|+.-..++.+-
T Consensus 241 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGi~~~~~i~~~ 283 (378)
T 2qdd_A 241 MLDECLHEFSDHLAAWSRGACEGVKIKPNRV-GGLTRARQIRDF 283 (378)
T ss_dssp EECTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHHHH
T ss_pred EECCCcCCHHHHHHHHHhCCCCEEEeccccc-CCHHHHHHHHHH
Confidence 9999999999999999865 89999987776 456655555443
No 264
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.62 E-value=0.00023 Score=72.40 Aligned_cols=139 Identities=14% Similarity=0.064 Sum_probs=87.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEE-ecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVK-LTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vK-l~p~ 642 (842)
.|++.-+.....++. .++.+.++|+|+|.++... ..+.+.++++.+++. +++..+. +.+.
T Consensus 60 ~~i~ld~~l~d~p~~---~~~~~~~aGad~i~vh~~~---------------~~~~~~~~~~~~~~~-g~~~~~d~l~~~ 120 (218)
T 3jr2_A 60 HILVCDMKTTDGGAI---LSRMAFEAGADWITVSAAA---------------HIATIAACKKVADEL-NGEIQIEIYGNW 120 (218)
T ss_dssp SEEEEEEEECSCHHH---HHHHHHHHTCSEEEEETTS---------------CHHHHHHHHHHHHHH-TCEEEEECCSSC
T ss_pred CcEEEEEeecccHHH---HHHHHHhcCCCEEEEecCC---------------CHHHHHHHHHHHHHh-CCccceeeeecC
Confidence 455544433234544 3466667899999997422 134567777877765 5665553 3331
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
.. +-++.+.+.|+|.+.+.-+. .++..|....+..++.+++++. .++||+..
T Consensus 121 --T~-~~~~~~~~~g~d~v~~~~~~-----------------------~~~~~g~~~~~~~l~~i~~~~~--~~~pi~v~ 172 (218)
T 3jr2_A 121 --TM-QDAKAWVDLGITQAIYHRSR-----------------------DAELAGIGWTTDDLDKMRQLSA--LGIELSIT 172 (218)
T ss_dssp --CH-HHHHHHHHTTCCEEEEECCH-----------------------HHHHHTCCSCHHHHHHHHHHHH--TTCEEEEE
T ss_pred --CH-HHHHHHHHcCccceeeeecc-----------------------ccccCCCcCCHHHHHHHHHHhC--CCCCEEEE
Confidence 23 33455567799988762110 0111222223344666666654 37999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
||| +++++.+++.+||+.|-+||++..
T Consensus 173 GGI-~~~~~~~~~~aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 173 GGI-VPEDIYLFEGIKTKTFIAGRALAG 199 (218)
T ss_dssp SSC-CGGGGGGGTTSCEEEEEESGGGSH
T ss_pred CCC-CHHHHHHHHHcCCCEEEEchhhcC
Confidence 999 699999999999999999999884
No 265
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=97.62 E-value=0.00077 Score=74.22 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=109.3
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN 642 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~ 642 (842)
|+-.++. +.+++++.+.++++.+.|++.|.++++ .+++...+++++||+.+ ++|+.++....
T Consensus 132 ~~~~~i~-~~~~~~~~~~a~~~~~~Gf~~iKik~g---------------~~~~~~~e~v~avr~a~g~~~~l~vDan~~ 195 (369)
T 2p8b_A 132 PVTHVLS-IADPENMAEEAASMIQKGYQSFKMKVG---------------TNVKEDVKRIEAVRERVGNDIAIRVDVNQG 195 (369)
T ss_dssp ECCEEEC-SCCHHHHHHHHHHHHHTTCCEEEEECC---------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred eeeEEec-CCChHHHHHHHHHHHHcCcCEEEEEeC---------------CCHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 3334454 347889999999888889999999864 24677889999999986 68999998654
Q ss_pred hh--cHH-HHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 643 IT--NIT-DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 643 ~~--~~~-~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
++ +.. ++++.+++.|++.|-= | +.+..++..+++++.+ ++||
T Consensus 196 ~~~~~a~~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iPI 240 (369)
T 2p8b_A 196 WKNSANTLTALRSLGHLNIDWIEQ-----------------P-----------------VIADDIDAMAHIRSKT-DLPL 240 (369)
T ss_dssp TBSHHHHHHHHHTSTTSCCSCEEC-----------------C-----------------BCTTCHHHHHHHHHTC-CSCE
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEC-----------------C-----------------CCcccHHHHHHHHHhC-CCCE
Confidence 43 666 7888888888875520 1 1122377788888888 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
++.+.+.+.+++.+++..| ++.||+--.-+ .|+.-..++.+
T Consensus 241 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~~ 282 (369)
T 2p8b_A 241 MIDEGLKSSREMRQIIKLEAADKVNIKLMKC-GGIYPAVKLAH 282 (369)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHhCCCCEEEeecchh-CCHHHHHHHHH
Confidence 9999999999999999965 89999977766 45555545433
No 266
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.61 E-value=0.00025 Score=72.11 Aligned_cols=163 Identities=18% Similarity=0.234 Sum_probs=100.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+++-+- +.+.+++.+.++.+.+.|++.||+.+..|. ..+.++.+++... .+.+...- +
T Consensus 17 ~~ii~vir-~~~~~~~~~~~~al~~gGv~~iel~~k~~~-----------------~~~~i~~l~~~~~-~l~vgaGt-v 76 (224)
T 1vhc_A 17 LKIVPVIA-LDNADDILPLADTLAKNGLSVAEITFRSEA-----------------AADAIRLLRANRP-DFLIAAGT-V 76 (224)
T ss_dssp HCEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEETTSTT-----------------HHHHHHHHHHHCT-TCEEEEES-C
T ss_pred CCeEEEEe-CCCHHHHHHHHHHHHHcCCCEEEEeccCch-----------------HHHHHHHHHHhCc-CcEEeeCc-E
Confidence 56776664 578999999999999999999999753332 1245666666542 23333221 1
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcc-cCCCccc-----cCCCCCCcccc---c-hHHHHHHHHhh
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV-GTKKLTT-----YGGVSGNATRP---M-GLKAVSSIAKM 713 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~-~~~~~~~-----~gG~sG~~~~p---~-al~~v~~i~~~ 713 (842)
. ..+-++.+.++|+|+|+.-++.......-.+ .+.+.+ +.+..+. .-|.+-=.++| . .+++++++++.
T Consensus 77 l-~~d~~~~A~~aGAd~v~~p~~d~~v~~~ar~-~g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l~~~ 154 (224)
T 1vhc_A 77 L-TAEQVVLAKSSGADFVVTPGLNPKIVKLCQD-LNFPITPGVNNPMAIEIALEMGISAVKFFPAEASGGVKMIKALLGP 154 (224)
T ss_dssp C-SHHHHHHHHHHTCSEEECSSCCHHHHHHHHH-TTCCEECEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTT
T ss_pred e-eHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-hCCCEEeccCCHHHHHHHHHCCCCEEEEeeCccccCHHHHHHHHhh
Confidence 1 2366888999999999765432210000000 001111 0000000 00111111123 3 37889999998
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHh-CCCEEEEehhhhc
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQA-GAHAVQICSAVQN 750 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~-GA~~Vqv~ta~l~ 750 (842)
++++|+++.||| +.+++.+++.+ |+++|. +|++..
T Consensus 155 ~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 155 YAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp TTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred CCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcC
Confidence 878999999999 67999999998 999999 999883
No 267
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=97.61 E-value=0.00054 Score=76.38 Aligned_cols=152 Identities=11% Similarity=-0.009 Sum_probs=113.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+.++.....+++++.+.++++.+.|++.|.+++++... . | +.+.+...+.+++||+.+ ++||.|....
T Consensus 168 v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~---d--g---~~~~~~die~v~avReavG~d~~L~vDaN~ 239 (412)
T 3stp_A 168 IPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK---D--G---MPGMRENLKRVEAVREVIGYDNDLMLECYM 239 (412)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG---G--H---HHHHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc---c--c---cchHHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 5666664334578999999999888999999999876411 1 1 134577788999999986 6899999876
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-- | +.|-.++..+++++.. ++||
T Consensus 240 ~~~~~~Ai~~~~~Le~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iPI 284 (412)
T 3stp_A 240 GWNLDYAKRMLPKLAPYEPRWLEE-----------------P-----------------VIADDVAGYAELNAMN-IVPI 284 (412)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHTC-SSCE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHhCC-CCCE
Confidence 44 47788999999999887731 1 1222367778898887 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
++.+.+.+..|+.+++..| +|.||+--.-. -|..-..++
T Consensus 285 a~dE~~~~~~~~~~li~~~a~D~v~ik~~~~-GGit~a~ki 324 (412)
T 3stp_A 285 SGGEHEFSVIGCAELINRKAVSVLQYDTNRV-GGITAAQKI 324 (412)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCHHHH-THHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEecChhhc-CCHHHHHHH
Confidence 9999999999999999976 89998876665 334444444
No 268
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=97.60 E-value=0.0015 Score=71.98 Aligned_cols=138 Identities=9% Similarity=0.048 Sum_probs=106.5
Q ss_pred CCHhHHHHHHHHHhh-cCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHH
Q psy16199 574 YNKDDWLELSKKTEK-AGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITD 648 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~-agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~ 648 (842)
.+++++.+.++++.+ +|++.|.++++++ +++...+++++||+.+ ++++.++....+ .+..+
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~ 206 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGAR--------------TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASI 206 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSS--------------CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCC--------------ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHH
Confidence 478889888888887 8999999998653 3566678899999876 588999886543 47788
Q ss_pred HHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCH
Q psy16199 649 IAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSA 728 (842)
Q Consensus 649 ~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~ 728 (842)
+++.+++.|++.|-= | +.+..++..+++++.+ ++||++.+.+.+.
T Consensus 207 ~~~~l~~~~i~~iEq-----------------P-----------------~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~ 251 (370)
T 1nu5_A 207 WIPRLEEAGVELVEQ-----------------P-----------------VPRANFGALRRLTEQN-GVAILADESLSSL 251 (370)
T ss_dssp HHHHHHHHTCCEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSEEEESTTCCSH
T ss_pred HHHHHHhcCcceEeC-----------------C-----------------CCcccHHHHHHHHHhC-CCCEEeCCCCCCH
Confidence 999999999886521 1 1122377788888888 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 729 DVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 729 ~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
+|+.+++..| ++.||+--.-+ .|..-..++.+
T Consensus 252 ~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~~ 284 (370)
T 1nu5_A 252 SSAFELARDHAVDAFSLKLCNM-GGIANTLKVAA 284 (370)
T ss_dssp HHHHHHHHTTCCSEEEECHHHH-TSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEchhhc-CCHHHHHHHHH
Confidence 9999999976 89999877666 45555555443
No 269
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.60 E-value=9.7e-05 Score=85.50 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=69.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc------------------------------------c-----cc
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT------------------------------------N-----IR 186 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~------------------------------------~-----~~ 186 (842)
.+|+|||||..|+.+|..|++.|.+ |+|+++.... . .+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~k-V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFN-PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCC-CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe-EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 3499999999999999999999986 9999987311 0 00
Q ss_pred CC-------------------------------HH----HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCC
Q psy16199 187 AV-------------------------------PE----EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEK 231 (842)
Q Consensus 187 ~~-------------------------------~~----~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~ 231 (842)
.. .. ..+.+.+.|+++++++.++++..+++++.+|++.+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~------ 260 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN------ 260 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETT------
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECC------
Confidence 00 00 11224457999999999999986677777776643
Q ss_pred CCeeccCCceEEEECCEEEEccccC
Q psy16199 232 GEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 232 G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
| .++.||.||+|+|..
T Consensus 261 -------G--~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 261 -------G--EEIKSRHVVLAVGHS 276 (549)
T ss_dssp -------S--CEEECSCEEECCCTT
T ss_pred -------C--CEEECCEEEECCCCC
Confidence 2 268999999999988
No 270
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=97.60 E-value=0.00038 Score=77.87 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=102.7
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEec------cC----CCCCCCCCCcccCC-CCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 575 NKDDWLELSKKTEKAGADALELNL------SC----PHGMGERGMGLACG-QDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~------sc----P~~~~~~~~G~~~~-~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
+++++.+.++++.++|+++|.+++ ++ |.+. ..+|.... .+.+...+++++||+.+ +++|.+....
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~--~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~ 227 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN--RNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHS 227 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC--GGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc--ccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 789999999988888999999996 33 2111 12444432 35677889999999976 6899999865
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||
T Consensus 228 ~~~~~~ai~~~~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~iPI 272 (410)
T 2gl5_A 228 LLGTNSAIQFAKAIEKYRIFLYEE-----------------P-----------------IHPLNSDNMQKVSRST-TIPI 272 (410)
T ss_dssp CSCHHHHHHHHHHHGGGCEEEEEC-----------------S-----------------SCSSCHHHHHHHHHHC-SSCE
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEC-----------------C-----------------CChhhHHHHHHHHhhC-CCCE
Confidence 44 47788999999888765421 1 1222377788899888 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhh
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAV 748 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~ 748 (842)
++.+.+.+.+++.+++..| +|.||+--.-
T Consensus 273 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 302 (410)
T 2gl5_A 273 ATGERSYTRWGYRELLEKQSIAVAQPDLCL 302 (410)
T ss_dssp EECTTCCTTHHHHHHHHTTCCSEECCCTTT
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEecCccc
Confidence 9999999999999999976 7999875433
No 271
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.58 E-value=0.00027 Score=71.43 Aligned_cols=180 Identities=15% Similarity=0.136 Sum_probs=107.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|+|+-+- +.+.+++.+.++.+.+.|++.||+.+..|. ..+.++.+++... .+.+.-.- +
T Consensus 16 ~~~i~v~r-~~~~~~~~~~~~al~~gGv~~iel~~k~~~-----------------~~~~i~~l~~~~~-~~~vgagt-v 75 (214)
T 1wbh_A 16 GPVVPVIV-VKKLEHAVPMAKALVAGGVRVLNVTLRTEC-----------------AVDAIRAIAKEVP-EAIVGAGT-V 75 (214)
T ss_dssp CSEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEESCSTT-----------------HHHHHHHHHHHCT-TSEEEEES-C
T ss_pred CCEEEEEE-CCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----------------HHHHHHHHHHHCc-CCEEeeCE-E
Confidence 57787775 578999999999999999999999864332 1245666665543 22222211 2
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcc-cCCCccc-----cCCCCCCcccc---c-hHHHHHHHHhh
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV-GTKKLTT-----YGGVSGNATRP---M-GLKAVSSIAKM 713 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~-~~~~~~~-----~gG~sG~~~~p---~-al~~v~~i~~~ 713 (842)
-+ .+-++.+.++|+|+|+..++.......... .+.+.+ +.+..+. .-|.+-=.++| . ..++++.+++.
T Consensus 76 i~-~d~~~~A~~aGAd~v~~p~~d~~v~~~~~~-~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~~ 153 (214)
T 1wbh_A 76 LN-PQQLAEVTEAGAQFAISPGLTEPLLKAATE-GTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGP 153 (214)
T ss_dssp CS-HHHHHHHHHHTCSCEEESSCCHHHHHHHHH-SSSCEEEEESSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTT
T ss_pred EE-HHHHHHHHHcCCCEEEcCCCCHHHHHHHHH-hCCCEEEecCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHhhh
Confidence 22 256788999999999875542211000000 001111 0000000 00111111122 2 37889999998
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHh-CCCEEEEehhhhccCch----hHHHHHHHHHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQA-GAHAVQICSAVQNQDFT----VVDDYITGLQTLLY 768 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~-GA~~Vqv~ta~l~~gp~----~~~~i~~~l~~~m~ 768 (842)
++++|+++.||| +.+++.+++.+ |+++|. +|++... +. -+.++.+..++++.
T Consensus 154 ~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~-~~~~~~~~~~i~~~a~~~~~ 210 (214)
T 1wbh_A 154 FSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVPA-DALEAGDYDRITKLAREAVE 210 (214)
T ss_dssp CTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCH-HHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccCh-hhhhcCCHHHHHHHHHHHHH
Confidence 888999999999 67999999998 999999 9998832 21 12344444455543
No 272
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.58 E-value=0.00036 Score=75.09 Aligned_cols=170 Identities=16% Similarity=0.112 Sum_probs=101.8
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCcccc---------------C----------------------CH
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTNIR---------------A----------------------VP 189 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~~~---------------~----------------------~~ 189 (842)
+|+|||||..|+.+|..|++. |.+ |+|+++.+..... . ..
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~-V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLK-VCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSC-EEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCe-EEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 499999999999999999998 875 9999985422100 0 01
Q ss_pred H-----HHHHHHh-cCcEEecCCCceEEEcc---C-C--cEEEEEEEeecccCCCCeeccCCceEEEEC-----------
Q psy16199 190 E-----EVQLAWE-EKCEFLPFMSPVQVDVK---D-N--KIAGMQFNRTEQNEKGEWVEDEEQRIKLKA----------- 246 (842)
Q Consensus 190 ~-----~~~~~~~-~gV~i~~~~~v~~v~~~---~-~--~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~----------- 246 (842)
. ..+.+.+ .|++++.++.++++..+ + + ++.+|.........+|.... ..+..++.|
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~-~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQC-CMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CC-CCCCEEEEESCCCSSSCCCS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeeccccccee-ccCceEEEEeeccccccccc
Confidence 1 1122334 39999999999998754 3 4 88888876432222221000 113357899
Q ss_pred ----CEEEEccccCcCChhHHhh-cCCcccCCCCCe--------------eeCCCCCC-CCCCCeEEeccCC----CCc-
Q psy16199 247 ----NYIISAFGSTLLDNDVLEA-IKPVKLDKYGYP--------------EVNYTTMA-TSVPGVFCGGDTA----NLS- 301 (842)
Q Consensus 247 ----D~Vi~a~G~~~~~~~l~~~-l~gl~~~~~G~i--------------~vd~~~~~-Ts~~gVfa~GD~~----~~~- 301 (842)
|.||.|+|...+-..+... + ..++..+.+ +|+ .+.. +-+|++|++|-.+ +.+
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~e~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~r 301 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRI--VDIDQNQKLGGMKGLDMNHAEHDVVI-HSGAYAGVDNMYFAGMEVAELDGLNR 301 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHH--HHHHSSCCCCCCCCBCHHHHHHHHHH-HCEECTTSTTEEECTHHHHHHHTCCB
T ss_pred cccCCEEEECcCCCchHHHHHHhhc--cccccccccCceeccccccchhheee-cCCCccccCCEEECChHHHHhcCCCC
Confidence 9999999987554444332 2 111111111 122 1222 2689999999764 111
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHH
Q psy16199 302 --DTTVESVNDGKTAAWHIHKYIQ 323 (842)
Q Consensus 302 --~~~~~A~~~G~~aA~~I~~~L~ 323 (842)
...-.-+-+|++||..|.+.|.
T Consensus 302 ~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 302 MGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhhhhhhHHHHHHHHHHhh
Confidence 1233446789999999987663
No 273
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=97.57 E-value=0.00078 Score=74.36 Aligned_cols=144 Identities=12% Similarity=0.019 Sum_probs=111.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+.+++. ..+++++.+.++.+.+.|++.|-++++| +++.-.+.+++||+.+ ++++.++...
T Consensus 135 v~~~~~~~-~~~~e~~~~~a~~~~~~G~~~iKiK~G~---------------~~~~d~~~v~avR~a~g~~~~l~vDan~ 198 (378)
T 3eez_A 135 RPIASSVG-AKSVEETRAVIDRYRQRGYVAHSVKIGG---------------DVERDIARIRDVEDIREPGEIVLYDVNR 198 (378)
T ss_dssp EEBBCCBC-SCCHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHTTSCCTTCEEEEECTT
T ss_pred EEEEEEec-CCCHHHHHHHHHHHHhCCCCEEEeccCC---------------CHHHHHHHHHHHHHHcCCCceEEEECCC
Confidence 45555664 4689999999988888899999999865 4666778999999987 6899999876
Q ss_pred Chh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.++ +..++++.+++.|+ .|- .| .+ .++..+++++.. ++||
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE-----------------qP------------------~~-~~~~~~~l~~~~-~iPI 240 (378)
T 3eez_A 199 GWTRQQALRVMRATEDLHV-MFE-----------------QP------------------GE-TLDDIAAIRPLH-SAPV 240 (378)
T ss_dssp CCCHHHHHHHHHHTGGGTC-CEE-----------------CC------------------SS-SHHHHHHTGGGC-CCCE
T ss_pred CCCHHHHHHHHHHhccCCe-EEe-----------------cC------------------CC-CHHHHHHHHhhC-CCCE
Confidence 554 67788888888876 441 01 01 266778888887 6999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITG 762 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~ 762 (842)
++.+.+.+.+|+.+++..| +|.||+-..-+ .|+.-..++.+-
T Consensus 241 a~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~-GGit~~~~ia~~ 283 (378)
T 3eez_A 241 SVDECLVTLQDAARVARDGLAEVFGIKLNRV-GGLTRAARMRDI 283 (378)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHcCCCCEEEeCchhc-CCHHHHHHHHHH
Confidence 9999999999999999965 89999998887 566666665443
No 274
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.56 E-value=0.00099 Score=70.34 Aligned_cols=152 Identities=13% Similarity=0.062 Sum_probs=91.2
Q ss_pred ccceEEEeccCCCH------hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhh---CCc
Q psy16199 563 LSILIASIMCTYNK------DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS---VKI 633 (842)
Q Consensus 563 ~~pvi~si~~g~~~------e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~---~~~ 633 (842)
+.|+|+.++++.+. +....-++.+.+.|||+|.+.+.- + . .+.....+-+..+++. .++
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~----G--s------~~~~~~l~~i~~v~~~a~~~Gl 172 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYI----G--S------EYEHQSIKNIIQLVDAGMKVGM 172 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECT----T--S------TTHHHHHHHHHHHHHHHHTTTC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEEC----C--C------CcHHHHHHHHHHHHHHHHHcCC
Confidence 36899988764321 112122444456799999886521 0 0 1222233333333322 368
Q ss_pred cEEEEecCC------hhc-HHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHH
Q psy16199 634 PFFVKLTPN------ITN-ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKA 706 (842)
Q Consensus 634 Pv~vKl~p~------~~~-~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~ 706 (842)
|+++= ++. -.+ +...++.+.+.|+|.|.+.-| + +.
T Consensus 173 pvIie-~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t-----------------------------~--------e~ 214 (295)
T 3glc_A 173 PTMAV-TGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYV-----------------------------E--------KG 214 (295)
T ss_dssp CEEEE-ECC----CCSHHHHHHHHHHHHHTTCSEEEEECC-----------------------------T--------TT
T ss_pred EEEEE-CCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCC-----------------------------H--------HH
Confidence 99882 221 113 455788999999999887310 0 01
Q ss_pred HHHHHhhCCCCcEEEecCcCC-HHH----HHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 707 VSSIAKMFPNFPILGIGGIDS-ADV----ALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 707 v~~i~~~~~~ipIi~~GGI~t-~~d----a~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
++++.+.. .+||++.||+.+ .+| +.+++.+||++|-++|.+++. + -...+.+.|....
T Consensus 215 ~~~vv~~~-~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~-~-dp~~~~~al~~iv 277 (295)
T 3glc_A 215 FERIVAGC-PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS-D-HPVAMMKAVQAVV 277 (295)
T ss_dssp HHHHHHTC-SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS-S-SHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC-c-CHHHHHHHHHHHH
Confidence 35566665 599999999984 444 445558999999999999965 3 3455556555544
No 275
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=97.56 E-value=0.002 Score=70.97 Aligned_cols=142 Identities=12% Similarity=0.054 Sum_probs=109.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+..++. +.+++++.+.++++.++|++.|.++++. +++...+++++||+.+ ++|+.++...
T Consensus 136 vp~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 199 (371)
T 2ps2_A 136 LPLISSIY-VGEPEDMRARVAKYRAKGYKGQSVKISG---------------EPVTDAKRITAALANQQPDEFFIVDANG 199 (371)
T ss_dssp EEBEEEEC-SCCHHHHHHHHHHHHTTTCCEEEEECCS---------------CHHHHHHHHHHHTTTCCTTCEEEEECTT
T ss_pred eEEEEEeC-CCCHHHHHHHHHHHHHhChheEEeecCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 56777775 3589999999999888899999998642 4677889999999987 6899999865
Q ss_pred Ch--hcHHHHHHHH-HHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 642 NI--TNITDIAKAA-YEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 642 ~~--~~~~~~a~~~-~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
.+ .+..++++.+ ++.|+ .|- .| .+ .++..+++++.+ ++|
T Consensus 200 ~~~~~~a~~~~~~l~~~~~i-~iE-----------------~P------------------~~-~~~~~~~l~~~~-~iP 241 (371)
T 2ps2_A 200 KLSVETALRLLRLLPHGLDF-ALE-----------------AP------------------CA-TWRECISLRRKT-DIP 241 (371)
T ss_dssp BCCHHHHHHHHHHSCTTCCC-EEE-----------------CC------------------BS-SHHHHHHHHTTC-CSC
T ss_pred CcCHHHHHHHHHHHHhhcCC-cCc-----------------CC------------------cC-CHHHHHHHHhhC-CCC
Confidence 44 4677888888 88877 431 01 01 367788888887 799
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
|++.+.+.+.+++.+++..| +|.||+--.-+ .|..-..++.
T Consensus 242 I~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~ 283 (371)
T 2ps2_A 242 IIYDELATNEMSIVKILADDAAEGIDLKISKA-GGLTRGRRQR 283 (371)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEEEHHHH-TSHHHHHHHH
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEEechhhc-CCHHHHHHHH
Confidence 99999999999999999976 89999977666 4554444443
No 276
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=97.55 E-value=0.0037 Score=69.25 Aligned_cols=133 Identities=11% Similarity=0.027 Sum_probs=101.0
Q ss_pred cceEEEecc-CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMC-TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~-g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+..++.. ..+++++.+.++++.++|++.|.+++++ .+++...+++++||+.+ ++++.+...
T Consensus 133 vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~--------------~~~~~~~e~v~avR~a~G~~~~l~vDan 198 (389)
T 2oz8_A 133 VKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGH--------------RDFDRDLRRLELLKTCVPAGSKVMIDPN 198 (389)
T ss_dssp EEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCC--------------SSHHHHHHHHHHHHTTSCTTCEEEEECT
T ss_pred eEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCC--------------CCHHHHHHHHHHHHHhhCCCCeEEEECC
Confidence 355555421 1378999999998888899999999754 24567789999999987 689999886
Q ss_pred CCh--hcHHHHHHHHHH--CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCC
Q psy16199 641 PNI--TNITDIAKAAYE--GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN 716 (842)
Q Consensus 641 p~~--~~~~~~a~~~~~--~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ 716 (842)
..+ .+..++++.+++ .+++.|- .| +.+..++..+++++.+++
T Consensus 199 ~~~~~~~a~~~~~~l~~~g~~i~~iE-----------------qP-----------------~~~~~~~~~~~l~~~~~~ 244 (389)
T 2oz8_A 199 EAWTSKEALTKLVAIREAGHDLLWVE-----------------DP-----------------ILRHDHDGLRTLRHAVTW 244 (389)
T ss_dssp TCBCHHHHHHHHHHHHHTTCCCSEEE-----------------SC-----------------BCTTCHHHHHHHHHHCCS
T ss_pred CCCCHHHHHHHHHHHHhcCCCceEEe-----------------CC-----------------CCCcCHHHHHHHHhhCCC
Confidence 544 477889999999 5555431 01 112237777888888634
Q ss_pred CcEEEecCcCCHHHHHHHHHhC-CCEEEEe
Q psy16199 717 FPILGIGGIDSADVALQFIQAG-AHAVQIC 745 (842)
Q Consensus 717 ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ 745 (842)
+||++.+.+ +.+|+.+++..| +|.||+.
T Consensus 245 iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 245 TQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp SEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred CCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999999 999999999976 8999997
No 277
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.55 E-value=0.00019 Score=75.26 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=68.6
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
+..++++.+++.|++.|.+++... .+..+| ..++.++++++.+ ++||+..||
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~----------------------~~~~~g-----~~~~~i~~i~~~~-~iPvi~~gg 82 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDR----------------------DGTKSG-----YDTEMIRFVRPLT-TLPIIASGG 82 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTT----------------------SSCSSC-----CCHHHHHHHGGGC-CSCEEEESC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCc----------------------ccCCCc-----ccHHHHHHHHHhc-CCCEEEECC
Confidence 678999999999999999954211 111122 2378889999987 799999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhhcc--CchhHHHHHH
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQNQ--DFTVVDDYIT 761 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l~~--gp~~~~~i~~ 761 (842)
|.+.+++.+++.+||++|.++++++.. .|..+.++.+
T Consensus 83 i~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 83 AGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC
T ss_pred CCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHH
Confidence 999999999999999999999999943 4777766543
No 278
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.54 E-value=0.0019 Score=65.43 Aligned_cols=140 Identities=16% Similarity=0.085 Sum_probs=85.5
Q ss_pred HHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe-----cCChhcHHHHHHHH
Q psy16199 579 WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL-----TPNITNITDIAKAA 653 (842)
Q Consensus 579 ~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl-----~p~~~~~~~~a~~~ 653 (842)
..+..+ .+.|||.|++-++- |.....+.+.+.+-++++++..+- ..+|+ -++.+++...++.+
T Consensus 70 ~~E~~~--i~~GAdEID~Vini---------g~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia 137 (226)
T 1vcv_A 70 IALVSR--LAEVADEIDVVAPI---------GLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDII 137 (226)
T ss_dssp HHHHHH--HTTTCSEEEEECCH---------HHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHH--HHCCCCEEEEecch---------hhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHH
Confidence 344444 44699999986521 222235678888888889887642 25563 12334678889999
Q ss_pred HHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC-CCCcEEEecCcCCHHHHH
Q psy16199 654 YEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPILGIGGIDSADVAL 732 (842)
Q Consensus 654 ~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~-~~ipIi~~GGI~t~~da~ 732 (842)
.++|+|+|-.+..+... ......|..|.+ .+-..+.+++.-+.. ++++|-++|||+|.+|+.
T Consensus 138 ~eaGADfVKTSTGf~~~----------------~~~~~~~~~~gA-t~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al 200 (226)
T 1vcv_A 138 AEAGAHFIKSSTGFAEE----------------AYAARQGNPVHS-TPERAAAIARYIKEKGYRLGVKMAGGIRTREQAK 200 (226)
T ss_dssp HHHTCSEEECCCSCCCH----------------HHHHHTTCCSSC-CHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHH
T ss_pred HHcCCCEEEeCCCCCcc----------------ccccccCCCCCC-CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHH
Confidence 99999999763211100 000000112222 222334444432224 359999999999999999
Q ss_pred HHHHh---CCC----EEEEehh
Q psy16199 733 QFIQA---GAH----AVQICSA 747 (842)
Q Consensus 733 ~~l~~---GA~----~Vqv~ta 747 (842)
+++.+ ||+ -+...++
T Consensus 201 ~~i~a~~~Ga~~~~fRiGtS~~ 222 (226)
T 1vcv_A 201 AIVDAIGWGEDPARVRLGTSTP 222 (226)
T ss_dssp HHHHHHCSCSCTTTEEEEESCG
T ss_pred HHHHHHHCCCCcCCceEecCch
Confidence 99999 999 6655443
No 279
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=97.51 E-value=0.00079 Score=75.25 Aligned_cols=133 Identities=14% Similarity=0.142 Sum_probs=101.5
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEec----cCCCCCCCCCCcccCC--CCHHHHHHHHHHHHhhC--CccEEEEecCCh--h
Q psy16199 575 NKDDWLELSKKTEKAGADALELNL----SCPHGMGERGMGLACG--QDPEMVRNISLWVRSSV--KIPFFVKLTPNI--T 644 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~----scP~~~~~~~~G~~~~--~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~ 644 (842)
+++++.+.++++.++|+++|.+++ +..... +|.++. .+.+...+++++||+.+ ++++.+.....+ .
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~ 224 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRD----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIP 224 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSC----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHH
Confidence 688899999988888999999998 432111 344443 25677889999999976 689999886544 4
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||++.+.
T Consensus 225 ~a~~~~~~l~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~ 269 (410)
T 2qq6_A 225 SSIRFARAMEPFGLLWLEE-----------------P-----------------TPPENLDALAEVRRST-STPICAGEN 269 (410)
T ss_dssp HHHHHHHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHTTC-SSCEEECTT
T ss_pred HHHHHHHHHhhcCCCeEEC-----------------C-----------------CChhhHHHHHHHHhhC-CCCEEeCCC
Confidence 7788999999999886531 1 1122377788888887 799999999
Q ss_pred cCCHHHHHHHHHhC-CCEEEEeh
Q psy16199 725 IDSADVALQFIQAG-AHAVQICS 746 (842)
Q Consensus 725 I~t~~da~~~l~~G-A~~Vqv~t 746 (842)
+.+.+++.+++..| ++.||+=-
T Consensus 270 ~~~~~~~~~~i~~~~~d~v~ik~ 292 (410)
T 2qq6_A 270 VYTRFDFRELFAKRAVDYVMPDV 292 (410)
T ss_dssp CCSHHHHHHHHHTTCCSEECCBH
T ss_pred cCCHHHHHHHHHcCCCCEEecCc
Confidence 99999999999976 88888743
No 280
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.51 E-value=0.0013 Score=65.87 Aligned_cols=135 Identities=15% Similarity=0.146 Sum_probs=94.6
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccE-EEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF-FVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv-~vKl~p~ 642 (842)
.|+|+-+- +.++++...+++.+.+.|++.||+.+..|+. .+.++.+++...-++ .+ .+
T Consensus 13 ~~vi~Vir-~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a-----------------~~~I~~l~~~~p~~~IGA---GT 71 (217)
T 3lab_A 13 KPLIPVIV-IDDLVHAIPMAKALVAGGVHLLEVTLRTEAG-----------------LAAISAIKKAVPEAIVGA---GT 71 (217)
T ss_dssp CSEEEEEC-CSCGGGHHHHHHHHHHTTCCEEEEETTSTTH-----------------HHHHHHHHHHCTTSEEEE---EC
T ss_pred CCEEEEEE-cCCHHHHHHHHHHHHHcCCCEEEEeCCCccH-----------------HHHHHHHHHHCCCCeEee---cc
Confidence 57777775 6799999999999999999999998877642 366777777764333 22 22
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC-----
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF----- 717 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i----- 717 (842)
+.+ .+-++.+.++|+++|+.=+. . -+.++..++. ++
T Consensus 72 Vlt-~~~a~~ai~AGA~fivsP~~---------------------------------~---~evi~~~~~~--~v~~~~~ 112 (217)
T 3lab_A 72 VCT-ADDFQKAIDAGAQFIVSPGL---------------------------------T---PELIEKAKQV--KLDGQWQ 112 (217)
T ss_dssp CCS-HHHHHHHHHHTCSEEEESSC---------------------------------C---HHHHHHHHHH--HHHCSCC
T ss_pred ccC-HHHHHHHHHcCCCEEEeCCC---------------------------------c---HHHHHHHHHc--CCCccCC
Confidence 333 45588999999999976111 1 2334443332 46
Q ss_pred -cEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHH
Q psy16199 718 -PILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 718 -pIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
|++- |+.|+.++.+++++|+|.|.+.-+-...|+.+++.++
T Consensus 113 ~~~~P--G~~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~ 154 (217)
T 3lab_A 113 GVFLP--GVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWS 154 (217)
T ss_dssp CEEEE--EECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHH
T ss_pred CeEeC--CCCCHHHHHHHHHcCCCEEEECccccccCHHHHHHHH
Confidence 7776 8899999999999999999886543323455555543
No 281
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.51 E-value=0.00036 Score=81.61 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=45.6
Q ss_pred HHhcCcEEecCCCceEEEccC-CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhc
Q psy16199 195 AWEEKCEFLPFMSPVQVDVKD-NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI 266 (842)
Q Consensus 195 ~~~~gV~i~~~~~v~~v~~~~-~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l 266 (842)
+.+.||++++++.++++..++ +++.+|++.+. +|+..++.+|.||+|+|....+.++.+..
T Consensus 265 ~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~-----------~g~~~~i~a~~VVlAtGg~~~n~~~~~~~ 326 (571)
T 1y0p_A 265 AVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGM-----------YKGYYWVKADAVILATGGFAKNNERVAKL 326 (571)
T ss_dssp HHHTTCEEESSEEEEEEEECTTSCEEEEEEEET-----------TTEEEEEECSEEEECCCCCTTCHHHHHHH
T ss_pred HHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeC-----------CCcEEEEECCeEEEeCCCcccCHHHHHHh
Confidence 345689999999999987555 78888877641 34556799999999999875666666543
No 282
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.50 E-value=0.0011 Score=67.41 Aligned_cols=124 Identities=19% Similarity=0.134 Sum_probs=78.7
Q ss_pred HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC---CccEEEEec-----CChhcHH
Q psy16199 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV---KIPFFVKLT-----PNITNIT 647 (842)
Q Consensus 576 ~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~---~~Pv~vKl~-----p~~~~~~ 647 (842)
.+.-..-++.+.+.|||.|++.++- |.. .+.+.+-+.++++.. ++|+ |+- .+-+.+.
T Consensus 87 ~~~k~~e~~~Av~~GAdEID~vini---------g~~----~~~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~ 151 (234)
T 1n7k_A 87 LEVKLVEAQTVLEAGATELDVVPHL---------SLG----PEAVYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLS 151 (234)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCG---------GGC----HHHHHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccc---------hHH----HHHHHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHH
Confidence 3333344445555699999986421 111 115556666666653 3554 652 1234677
Q ss_pred HHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH--HHhhCCCCcEEEecCc
Q psy16199 648 DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS--IAKMFPNFPILGIGGI 725 (842)
Q Consensus 648 ~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~--i~~~~~~ipIi~~GGI 725 (842)
..++.+.++|+|+|..+.. +++..| + +.+-++. +++.+. +||-++|||
T Consensus 152 ~a~ria~eaGADfVKTsTG------------------------~~~~~g-A----t~~dv~l~~m~~~v~-v~VKaaGGi 201 (234)
T 1n7k_A 152 LLVDSSRRAGADIVKTSTG------------------------VYTKGG-D----PVTVFRLASLAKPLG-MGVKASGGI 201 (234)
T ss_dssp HHHHHHHHTTCSEEESCCS------------------------SSCCCC-S----HHHHHHHHHHHGGGT-CEEEEESSC
T ss_pred HHHHHHHHhCCCEEEeCCC------------------------CCCCCC-C----CHHHHHHHHHHHHHC-CCEEEecCC
Confidence 8888899999999976211 111011 1 2444555 777775 999999999
Q ss_pred CCHHHHHHHHHhCCCEEEE
Q psy16199 726 DSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 726 ~t~~da~~~l~~GA~~Vqv 744 (842)
++.+|+.+++.+||+-+..
T Consensus 202 rt~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 202 RSGIDAVLAVGAGADIIGT 220 (234)
T ss_dssp CSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHcCccccch
Confidence 9999999999999994443
No 283
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.48 E-value=0.00045 Score=76.76 Aligned_cols=101 Identities=20% Similarity=0.301 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCC
Q psy16199 616 DPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695 (842)
Q Consensus 616 ~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~s 695 (842)
+++.+.++++.+++. ++|+++++.+. +..+.++.+.+.|+|+|.+..+.. .+.+.
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~--~~~e~a~~~~~agad~i~i~~~~~----------------------~~~~~ 194 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ--NVREIAPIVIKAGADLLVIQGTLI----------------------SAEHV 194 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT--THHHHHHHHHHTTCSEEEEECSSC----------------------CSSCC
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc--cHHHHHHHHHHCCCCEEEEeCCcc----------------------ccccC
Confidence 678888999999886 89999999874 557788888899999998742210 00111
Q ss_pred CCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEeh
Q psy16199 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICS 746 (842)
Q Consensus 696 G~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~t 746 (842)
++. ..+..+.++++.. ++||++ |||.|++|+.+++++|||+|.+++
T Consensus 195 ~~~---~~~~~i~~l~~~~-~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 195 NTG---GEALNLKEFIGSL-DVPVIA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp CC--------CHHHHHHHC-SSCEEE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred CCc---ccHHHHHHHHHhc-CCCEEE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 111 1244467777887 799998 899999999999999999999976
No 284
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.47 E-value=0.00028 Score=71.88 Aligned_cols=180 Identities=13% Similarity=0.127 Sum_probs=107.7
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~ 642 (842)
.++++-+- +.+.+++.+.++.+.+.|++.||+-+..|. ..+.++.+++.. ++-+..-. .
T Consensus 26 ~~ii~V~r-~~~~~~~~~~~~al~~gGv~~iel~~k~~~-----------------~~~~i~~l~~~~~~~~igagt-v- 85 (225)
T 1mxs_A 26 ARILPVIT-IAREEDILPLADALAAGGIRTLEVTLRSQH-----------------GLKAIQVLREQRPELCVGAGT-V- 85 (225)
T ss_dssp HSEEEEEC-CSCGGGHHHHHHHHHHTTCCEEEEESSSTH-----------------HHHHHHHHHHHCTTSEEEEEC-C-
T ss_pred CCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEecCCcc-----------------HHHHHHHHHHhCcccEEeeCe-E-
Confidence 46666664 568999999999999999999999653221 234566666554 33333332 2
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcc-cCCCccc-----cCCCCCCcccc---c-hHHHHHHHHh
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV-GTKKLTT-----YGGVSGNATRP---M-GLKAVSSIAK 712 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~-~~~~~~~-----~gG~sG~~~~p---~-al~~v~~i~~ 712 (842)
+ ..+-++.+.++|+|+|+.-++.......... .+.+.+ +.+..+. .-|.+-=.++| . ..++++.++.
T Consensus 86 l--~~d~~~~A~~aGAd~v~~p~~d~~v~~~~~~-~g~~~i~G~~t~~e~~~A~~~Gad~vk~FPa~~~~G~~~lk~i~~ 162 (225)
T 1mxs_A 86 L--DRSMFAAVEAAGAQFVVTPGITEDILEAGVD-SEIPLLPGISTPSEIMMGYALGYRRFKLFPAEISGGVAAIKAFGG 162 (225)
T ss_dssp C--SHHHHHHHHHHTCSSEECSSCCHHHHHHHHH-CSSCEECEECSHHHHHHHHTTTCCEEEETTHHHHTHHHHHHHHHT
T ss_pred e--eHHHHHHHHHCCCCEEEeCCCCHHHHHHHHH-hCCCEEEeeCCHHHHHHHHHCCCCEEEEccCccccCHHHHHHHHh
Confidence 2 2366888999999999875432111000000 001111 0000000 01111111234 2 4688889988
Q ss_pred hCCCCcEEEecCcCCHHHHHHHHH-hCCCEEEEehhhhccC---chhHHHHHHHHHHHHH
Q psy16199 713 MFPNFPILGIGGIDSADVALQFIQ-AGAHAVQICSAVQNQD---FTVVDDYITGLQTLLY 768 (842)
Q Consensus 713 ~~~~ipIi~~GGI~t~~da~~~l~-~GA~~Vqv~ta~l~~g---p~~~~~i~~~l~~~m~ 768 (842)
.++++|+++.||| +.+++.+++. +||++|. +|+++... -.-+.++.+..++++.
T Consensus 163 ~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i~~~~~~~i~~~a~~~~~ 220 (225)
T 1mxs_A 163 PFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWIKNGDWARIEACSAEAIA 220 (225)
T ss_dssp TTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCchhhccCCHHHHHHHHHHHHH
Confidence 8888999999999 7899999999 7999999 99998421 0113445555555553
No 285
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=97.47 E-value=0.0033 Score=69.03 Aligned_cols=146 Identities=10% Similarity=0.071 Sum_probs=108.8
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN 642 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~ 642 (842)
|+-.++. ..+++++.+.++++.+.|++.|.++++++ +++...+++++||+.+ ++++.++....
T Consensus 131 ~~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~d~~~v~avr~a~g~~~~l~vDan~~ 195 (366)
T 1tkk_A 131 ETDYTVS-VNSPEEMAADAENYLKQGFQTLKIKVGKD--------------DIATDIARIQEIRKRVGSAVKLRLDANQG 195 (366)
T ss_dssp EBCEEEC-SCCHHHHHHHHHHHHHHTCCEEEEECCSS--------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeeEEec-CCCHHHHHHHHHHHHHcCCCeEEEEeCCC--------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 3334453 24788898888888888999999997652 4677788999999886 68999998664
Q ss_pred h--hcHHHHHHHHHH--CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 643 I--TNITDIAKAAYE--GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 643 ~--~~~~~~a~~~~~--~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
+ .+..++++.+++ .|++.|- .| +.|..++..+++++.+ ++|
T Consensus 196 ~~~~~a~~~~~~l~~~~~~i~~iE-----------------qP-----------------~~~~d~~~~~~l~~~~-~ip 240 (366)
T 1tkk_A 196 WRPKEAVTAIRKMEDAGLGIELVE-----------------QP-----------------VHKDDLAGLKKVTDAT-DTP 240 (366)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEE-----------------CC-----------------SCTTCHHHHHHHHHHC-SSC
T ss_pred CCHHHHHHHHHHHhhcCCCceEEE-----------------CC-----------------CCcccHHHHHHHHhhC-CCC
Confidence 4 467889999999 7665441 01 1122377788888888 799
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
|++.+.+.+.+|+.+++..| ++.||+--.-+ .|+.-..++.+
T Consensus 241 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~-GGit~~~~i~~ 283 (366)
T 1tkk_A 241 IMADESVFTPRQAFEVLQTRSADLINIKLMKA-GGISGAEKINA 283 (366)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHhCCCCEEEeehhhh-cCHHHHHHHHH
Confidence 99999999999999999865 89999877666 45554545443
No 286
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=97.45 E-value=0.0015 Score=72.52 Aligned_cols=126 Identities=13% Similarity=0.103 Sum_probs=101.0
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHHHH
Q psy16199 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITDIA 650 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~~a 650 (842)
+++++.+.++++.++|+++|+++++- .+++...+++++||+.+ ++||.+.....+ .+..+++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~--------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~ 227 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ--------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMC 227 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC--------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC--------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHH
Confidence 78999999999888999999998641 24678889999999985 689999986544 4778899
Q ss_pred HHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHH
Q psy16199 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV 730 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~d 730 (842)
+.+++.|++.|-- | +.+..++..+++++.+ ++||++.+.+.+.++
T Consensus 228 ~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~ 272 (393)
T 2og9_A 228 RIFEPFNLVWIEE-----------------P-----------------LDAYDHEGHAALALQF-DTPIATGEMLTSAAE 272 (393)
T ss_dssp HHHGGGCCSCEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHH
T ss_pred HHHHhhCCCEEEC-----------------C-----------------CCcccHHHHHHHHHhC-CCCEEeCCCcCCHHH
Confidence 9999999886521 1 1122377788888888 799999999999999
Q ss_pred HHHHHHhC-CCEEEEehhhh
Q psy16199 731 ALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 731 a~~~l~~G-A~~Vqv~ta~l 749 (842)
+.+++..| +|.|++--.-.
T Consensus 273 ~~~~i~~~~~d~v~ik~~~~ 292 (393)
T 2og9_A 273 HGDLIRHRAADYLMPDAPRV 292 (393)
T ss_dssp HHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHHCCCCCEEeeCcccc
Confidence 99999976 89998865444
No 287
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.44 E-value=0.0019 Score=66.56 Aligned_cols=116 Identities=11% Similarity=0.146 Sum_probs=84.8
Q ss_pred HhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHC-CCCEEEEe
Q psy16199 586 TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEG-KADGVSAI 664 (842)
Q Consensus 586 ~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~-G~d~i~v~ 664 (842)
+..+|||+|-|+.++ .+.+.+.++++..++ .++-++|=+. +..+ ++.+.+. |++.|-+.
T Consensus 119 a~~~GAD~ilLi~a~--------------l~~~~l~~l~~~a~~-lGl~~lvEv~----~~eE-~~~A~~l~g~~iIGin 178 (251)
T 1i4n_A 119 ASSVGADAILIIARI--------------LTAEQIKEIYEAAEE-LGMDSLVEVH----SRED-LEKVFSVIRPKIIGIN 178 (251)
T ss_dssp HHHTTCSEEEEEGGG--------------SCHHHHHHHHHHHHT-TTCEEEEEEC----SHHH-HHHHHTTCCCSEEEEE
T ss_pred HHHcCCCEEEEeccc--------------CCHHHHHHHHHHHHH-cCCeEEEEeC----CHHH-HHHHHhcCCCCEEEEe
Confidence 455799999999763 234678888888876 4777777654 2333 5677788 99988887
Q ss_pred cCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEE
Q psy16199 665 NTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQ 743 (842)
Q Consensus 665 nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vq 743 (842)
|+-... ....+....++.+..| ++++|+-|||.|++|+.++..+ |++|-
T Consensus 179 nr~l~t-----------------------------~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avL 228 (251)
T 1i4n_A 179 TRDLDT-----------------------------FEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVL 228 (251)
T ss_dssp CBCTTT-----------------------------CCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEE
T ss_pred Cccccc-----------------------------CCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEE
Confidence 752110 0111344455666665 4899999999999999999999 99999
Q ss_pred Eehhhhcc
Q psy16199 744 ICSAVQNQ 751 (842)
Q Consensus 744 v~ta~l~~ 751 (842)
||+++|..
T Consensus 229 VG~aimr~ 236 (251)
T 1i4n_A 229 VGTSIMKA 236 (251)
T ss_dssp ECHHHHHC
T ss_pred EcHHHcCC
Confidence 99999954
No 288
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.43 E-value=0.00051 Score=75.51 Aligned_cols=94 Identities=20% Similarity=0.267 Sum_probs=69.2
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcccc------------------CC-----------------------
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIR------------------AV----------------------- 188 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~~------------------~~----------------------- 188 (842)
|+|||||++|+-+|..|++.|.+ |+|++|++...-+ ..
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~-V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLK-TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred EEEECcCHHHHHHHHHHHHCCCc-EEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 99999999999999999999986 9999986421000 00
Q ss_pred ---------------HH-----HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCE
Q psy16199 189 ---------------PE-----EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANY 248 (842)
Q Consensus 189 ---------------~~-----~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~ 248 (842)
.. ..+.+.+.|++++.++.++.+..+++++..+.... +++..++.+|.
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~------------~~~~~~~~a~~ 153 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRH------------NNEIVDVRAKM 153 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEE------------TTEEEEEEEEE
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecc------------cccceEEEEeE
Confidence 00 12234567999999999988876677776655443 34566899999
Q ss_pred EEEccccC
Q psy16199 249 IISAFGST 256 (842)
Q Consensus 249 Vi~a~G~~ 256 (842)
||-|.|..
T Consensus 154 vIgAdG~~ 161 (397)
T 3oz2_A 154 VIAADGFE 161 (397)
T ss_dssp EEECCCTT
T ss_pred EEeCCccc
Confidence 99999976
No 289
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.43 E-value=0.00021 Score=79.30 Aligned_cols=91 Identities=18% Similarity=0.232 Sum_probs=64.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc--cCCHH--------------HHHHHHhcCcEEecCCCceEE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI--RAVPE--------------EVQLAWEEKCEFLPFMSPVQV 211 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~--~~~~~--------------~~~~~~~~gV~i~~~~~v~~v 211 (842)
-||+|||||..|+.+|..|.+.+.+ |+|+++.+.... +..+. ..+.+.+.||++++++.++.+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~-itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~i 88 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDD-ITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSI 88 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSC-EEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCE-EEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEE
Confidence 4599999999999999999666654 999998764211 11111 112345679999999999999
Q ss_pred EccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 212 ~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
..++.. |++. +| .++.+|.+|+|||.+|
T Consensus 89 d~~~~~---v~~~-------------~g--~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 89 DPNNKL---VTLK-------------SG--EKIKYEKLIIASGSIA 116 (385)
T ss_dssp ETTTTE---EEET-------------TS--CEEECSEEEECCCEEE
T ss_pred ECCCCE---EEEC-------------CC--CEEECCEEEEecCCCc
Confidence 743332 3332 22 2689999999999984
No 290
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.42 E-value=0.00081 Score=70.06 Aligned_cols=123 Identities=20% Similarity=0.242 Sum_probs=78.5
Q ss_pred HHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHH---HHHHHHHHHHhhCCccEEEEecCC---hh--c-HHHHHH
Q psy16199 581 ELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPE---MVRNISLWVRSSVKIPFFVKLTPN---IT--N-ITDIAK 651 (842)
Q Consensus 581 ~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~---~~~~ii~~v~~~~~~Pv~vKl~p~---~~--~-~~~~a~ 651 (842)
.-++.+.+.|||.|++-++- |.....+.+ .+.+-++++++..+ +..+|+--. ++ + +...++
T Consensus 110 ~E~~~Av~~GAdEIDmVini---------g~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ 179 (281)
T 2a4a_A 110 NDTEKALDDGADEIDLVINY---------KKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTL 179 (281)
T ss_dssp HHHHHHHHHTCSEEEEECCH---------HHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecch---------HhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHH
Confidence 33444445699999986521 222224556 78888888888774 345676321 22 3 567889
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh--------CCCCcEEEec
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM--------FPNFPILGIG 723 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~--------~~~ipIi~~G 723 (842)
.+.++|+|+|..+. |...|.+ .+...+.+++..+. -++++|-++|
T Consensus 180 ia~eaGADfVKTST--------------------------Gf~~~gA-T~edv~lm~~~v~~~~~~~~~tg~~vgVKaaG 232 (281)
T 2a4a_A 180 AVLNGNADFIKTST--------------------------GKVQINA-TPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSG 232 (281)
T ss_dssp HHHTTTCSEEECCC--------------------------SCSSCCC-CHHHHHHHHHHHHHHHHHCGGGTTCCEEEEES
T ss_pred HHHHhCCCEEEeCC--------------------------CCCCCCC-CHHHHHHHHHHHHHhhcccccCCCCceEEEeC
Confidence 99999999997621 1111222 22233444433221 2369999999
Q ss_pred CcCCHHHHHHHHHhCCC
Q psy16199 724 GIDSADVALQFIQAGAH 740 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~ 740 (842)
||+|.+|+.+++.+||+
T Consensus 233 GIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 233 GISDLNTASHYILLARR 249 (281)
T ss_dssp SCCSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhh
Confidence 99999999999999876
No 291
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=97.42 E-value=0.00099 Score=74.36 Aligned_cols=137 Identities=12% Similarity=0.102 Sum_probs=100.6
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEec------cCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--h
Q psy16199 575 NKDDWLELSKKTEKAGADALELNL------SCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--T 644 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~------scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~ 644 (842)
+++++.+.++++.++|+++|.+++ +.+....+.+ .....+.+...+++++||+.+ ++++.++....+ .
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~--~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~ 229 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNG--PLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTT 229 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCS--SCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccC--CCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHH
Confidence 789999999988888999999986 3221001111 010124567789999999976 689999986544 4
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||++.+.
T Consensus 230 ~a~~~~~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~ 274 (407)
T 2o56_A 230 SAIQFGRMIEELGIFYYEE-----------------P-----------------VMPLNPAQMKQVADKV-NIPLAAGER 274 (407)
T ss_dssp HHHHHHHHHGGGCCSCEEC-----------------S-----------------SCSSSHHHHHHHHHHC-CSCEEECTT
T ss_pred HHHHHHHHHHhcCCCEEeC-----------------C-----------------CChhhHHHHHHHHHhC-CCCEEeCCC
Confidence 7788999999998875521 1 1223377788898888 799999999
Q ss_pred cCCHHHHHHHHHhC-CCEEEEehhh
Q psy16199 725 IDSADVALQFIQAG-AHAVQICSAV 748 (842)
Q Consensus 725 I~t~~da~~~l~~G-A~~Vqv~ta~ 748 (842)
+.+.+++.+++..| ++.||+=-.-
T Consensus 275 ~~~~~~~~~~i~~~~~d~v~ik~~~ 299 (407)
T 2o56_A 275 IYWRWGYRPFLENGSLSVIQPDICT 299 (407)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred cCCHHHHHHHHHcCCCCEEecCccc
Confidence 99999999999976 8898875433
No 292
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.41 E-value=0.0045 Score=68.57 Aligned_cols=143 Identities=12% Similarity=0.046 Sum_probs=111.4
Q ss_pred cceEEEecc--CCCHhHHHHHH-HHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEE
Q psy16199 564 SILIASIMC--TYNKDDWLELS-KKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVK 638 (842)
Q Consensus 564 ~pvi~si~~--g~~~e~~~~~a-~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vK 638 (842)
.|+.+++.+ ..+++++.+.+ +.+.+.|+..+-+.++++... ...+++.-.+.+++||+.+ ++++.|.
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~--------~~~~~~~d~~~v~avR~a~g~~~~l~vD 197 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR--------CDVDIPGDIAKARAVRELLGPDAVIGFD 197 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC--------CSCCHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc--------cccCHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 577777621 25788888888 777777999999999886321 1357888889999999985 6899999
Q ss_pred ecCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCC
Q psy16199 639 LTPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN 716 (842)
Q Consensus 639 l~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ 716 (842)
....+ .+..++++.+++.|++.|-= | +.|-.++..+++++.. +
T Consensus 198 aN~~~~~~~A~~~~~~L~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~ 242 (393)
T 4dwd_A 198 ANNGYSVGGAIRVGRALEDLGYSWFEE-----------------P-----------------VQHYHVGAMGEVAQRL-D 242 (393)
T ss_dssp CTTCCCHHHHHHHHHHHHHTTCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-S
T ss_pred CCCCCCHHHHHHHHHHHHhhCCCEEEC-----------------C-----------------CCcccHHHHHHHHhhC-C
Confidence 87644 47788999999999887631 1 1122367778888887 7
Q ss_pred CcEEEecCcCCHHHHHHHHHhCCCEEEEehhhh
Q psy16199 717 FPILGIGGIDSADVALQFIQAGAHAVQICSAVQ 749 (842)
Q Consensus 717 ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l 749 (842)
+||++...+.+.+|+.+++..|+|.||+--.-.
T Consensus 243 iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~~~~ 275 (393)
T 4dwd_A 243 ITVSAGEQTYTLQALKDLILSGVRMVQPDIVKM 275 (393)
T ss_dssp SEEEBCTTCCSHHHHHHHHHHTCCEECCCTTTT
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCEEEeCcccc
Confidence 999999999999999999998899999866555
No 293
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.41 E-value=0.0021 Score=65.06 Aligned_cols=152 Identities=13% Similarity=0.081 Sum_probs=93.7
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT 644 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~ 644 (842)
+++.-+-....++.+.+ .+.++|||+|.+|... ..+.+.++++.+++. +.++++++...++
T Consensus 58 ~v~lD~kl~dip~t~~~---~~~~~Gad~itvh~~~---------------g~~~l~~~~~~~~~~-g~~~~~~ll~~~t 118 (216)
T 1q6o_A 58 IVLADAKIADAGKILSR---MCFEANADWVTVICCA---------------DINTAKGALDVAKEF-NGDVQIELTGYWT 118 (216)
T ss_dssp EEEEEEEECSCHHHHHH---HHHHTTCSEEEEETTS---------------CHHHHHHHHHHHHHT-TCEEEEEECSCCC
T ss_pred eEEEEEEecccHHHHHH---HHHhCCCCEEEEeccC---------------CHHHHHHHHHHHHHc-CCCceeeeeeCCC
Confidence 44444433345666655 4556799999998522 134466777777763 7787777751233
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEec
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIG 723 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~G 723 (842)
..-++.+.+.|.+-++++-. .+ +...|..| +.+-++++++..+ ++||+..|
T Consensus 119 --~~~~~~l~~~~~~~~vl~~a---~~-----------------~~~~G~~g------~~~~i~~lr~~~~~~~~i~v~G 170 (216)
T 1q6o_A 119 --WEQAQQWRDAGIGQVVYHRS---RD-----------------AQAAGVAW------GEADITAIKRLSDMGFKVTVTG 170 (216)
T ss_dssp --HHHHHHHHHTTCCEEEEECC---HH-----------------HHHTTCCC------CHHHHHHHHHHHHTTCEEEEES
T ss_pred --hhhHHHHHhcCcHHHHHHHH---HH-----------------HHhcCCCC------CHHHHHHHHHhcCCCCcEEEEC
Confidence 23345666778777666211 00 11123333 2444555555443 58899999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHH
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQ 764 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~ 764 (842)
||. ++.+.+++.+||+.+-+||++... +| ..++++++.++
T Consensus 171 GI~-~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 171 GLA-LEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIA 212 (216)
T ss_dssp SCC-GGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred CcC-hhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHH
Confidence 997 788999999999999999999953 33 34455544443
No 294
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.40 E-value=0.00021 Score=77.49 Aligned_cols=91 Identities=18% Similarity=0.205 Sum_probs=63.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc--------------------ccC-----C-------HHHH----
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN--------------------IRA-----V-------PEEV---- 192 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~--------------------~~~-----~-------~~~~---- 192 (842)
+|+|||||..|+.+|..|++.|.+ |+++++.+... ++. . ....
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g~~-v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSGLS-YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSCC-EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 499999999999999999999986 99999875210 000 0 1211
Q ss_pred HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 193 QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 193 ~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
+.+.+.|+++++++.++.+...++.+..|.+. ++ ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~-------------~g---~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARD-------------GR---QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETT-------------SC---EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeC-------------CC---EEEeCEEEECCCCC
Confidence 22345699999999999987544432212211 12 68999999999953
No 295
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.40 E-value=0.00068 Score=79.14 Aligned_cols=61 Identities=15% Similarity=0.149 Sum_probs=45.4
Q ss_pred HHhcCcEEecCCCceEEEccC-CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhc
Q psy16199 195 AWEEKCEFLPFMSPVQVDVKD-NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI 266 (842)
Q Consensus 195 ~~~~gV~i~~~~~v~~v~~~~-~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l 266 (842)
+.+.||++++++.++++..++ +++.+|++.+. +|+..++.+|.||+|+|....+.++.+..
T Consensus 260 ~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~-----------~g~~~~i~A~~VVlAtGg~s~~~~~~~~~ 321 (566)
T 1qo8_A 260 AKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGK-----------HTGYYMIGAKSVVLATGGYGMNKEMIAYY 321 (566)
T ss_dssp HHHTTCCEECSEEEEEEEECTTSBEEEEEEEET-----------TTEEEEEEEEEEEECCCCCTTCHHHHHHH
T ss_pred HHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeC-----------CCcEEEEEcCEEEEecCCcccCHHHHHHh
Confidence 345689999999999987666 78888877641 34555789999999999875565665543
No 296
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.40 E-value=0.00037 Score=77.47 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=61.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCccccCCHH--------------HHHHHHhcCcEEecCCCceEEE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIRAVPE--------------EVQLAWEEKCEFLPFMSPVQVD 212 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~~~~~--------------~~~~~~~~gV~i~~~~~v~~v~ 212 (842)
+||||||||+.|+.+|..|.+.+.. +||||++++......... ..+.+...||+++.+ .++.|.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~id 81 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGID 81 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEEE
Confidence 4599999999999999999887642 699999876422211111 123455679998765 677776
Q ss_pred ccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 213 VKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 213 ~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
.+...+ .+. +| .++.+|.+|+|+|.+
T Consensus 82 ~~~~~v---~~~-------------~g--~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 82 PDKKLV---KTA-------------GG--AEFAYDRCVVAPGID 107 (401)
T ss_dssp TTTTEE---EET-------------TS--CEEECSEEEECCCEE
T ss_pred ccCcEE---Eec-------------cc--ceeecceeeeccCCc
Confidence 433222 222 22 378999999999988
No 297
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.40 E-value=0.00034 Score=72.23 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=74.9
Q ss_pred hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe
Q psy16199 643 ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI 722 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~ 722 (842)
..++.++|+...+.|+|.+++.. ++. ...| ++...++++++++.. .+|+-..
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvD---------ld~---------------a~~~---~~~~~~~i~~i~~~~-~~pl~vG 81 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVD---------LTG---------------AKDP---SKRQFALIEKLAKEV-SVNLQVG 81 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEE---------HHH---------------HHCG---GGCCHHHHHHHHHHC-CSEEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEe---------cCc---------------cccc---chhHHHHHHHHHHhc-CCCeEec
Confidence 35789999999999999999843 210 0111 344588999999998 6999999
Q ss_pred cCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 723 GGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 723 GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
|||+|-+|+.+++.+||+-|.++|+++ ..|.++.++.+..
T Consensus 82 GGIrs~e~~~~~l~~GadkVii~t~a~-~~p~li~e~~~~~ 121 (243)
T 4gj1_A 82 GGIRSKEEVKALLDCGVKRVVIGSMAI-KDATLCLEILKEF 121 (243)
T ss_dssp SSCCCHHHHHHHHHTTCSEEEECTTTT-TCHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHcCCCEEEEccccc-cCCchHHHHHhcc
Confidence 999999999999999999999999999 4599988775543
No 298
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=97.39 E-value=0.0022 Score=71.92 Aligned_cols=139 Identities=14% Similarity=0.146 Sum_probs=106.1
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCChh--cHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNIT--NITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~~ 649 (842)
.+++++.+.++.+.+.|+.+|-+++++|.... .|. .....+.+...+++++||+.+ +++|.+.....++ +..++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~-~G~-~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~ 222 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR-GGH-MPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRL 222 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT-CCB-CCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc-cCC-CcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHH
Confidence 57899999999888889999999999984321 111 001124677788999999986 6899998866544 77889
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|++.|-- | +.|-.++..+++++.+ ++||++.+.+.+..
T Consensus 223 ~~~Le~~~i~~iEe-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~ 267 (433)
T 3rcy_A 223 GQAIEPYSPLWYEE-----------------P-----------------VPPDNVGAMAQVARAV-RIPVATGERLTTKA 267 (433)
T ss_dssp HHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHS-SSCEEECTTCCSHH
T ss_pred HHHhhhcCCCEEEC-----------------C-----------------CChhhHHHHHHHHhcc-CCCEEecCCCCCHH
Confidence 99999999887631 1 1222377788899988 79999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhh
Q psy16199 730 VALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l 749 (842)
|+.+++..| +|.||+--.-.
T Consensus 268 ~~~~~l~~g~~D~v~~d~~~~ 288 (433)
T 3rcy_A 268 EFAPVLREGAAAILQPALGRA 288 (433)
T ss_dssp HHHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHHHcCCCCEEEeCchhc
Confidence 999999976 89998766555
No 299
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.38 E-value=0.00074 Score=69.81 Aligned_cols=124 Identities=14% Similarity=0.225 Sum_probs=76.8
Q ss_pred HHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCC-ccEEEEecC---Chh--c-HHHHHHHH
Q psy16199 581 ELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVK-IPFFVKLTP---NIT--N-ITDIAKAA 653 (842)
Q Consensus 581 ~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~-~Pv~vKl~p---~~~--~-~~~~a~~~ 653 (842)
.-++.+.+.|||.|++-++- |.-...+.+.+.+-++++++..+ -+..+|+-- .++ + +...++.+
T Consensus 89 ~E~~~Av~~GAdEIDmVini---------g~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia 159 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPY---------RALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEIS 159 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCH---------HHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeccH---------HhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHH
Confidence 33444455699999986522 21122455777777888887653 134567632 122 3 56788999
Q ss_pred HHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh-h-C-CCCcEEEecCcCCHHH
Q psy16199 654 YEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK-M-F-PNFPILGIGGIDSADV 730 (842)
Q Consensus 654 ~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~-~-~-~~ipIi~~GGI~t~~d 730 (842)
.++|+|+|-.+. |...|.+ .+-..+.+++.-+ . + ++++|-++|||+|.+|
T Consensus 160 ~eaGADfVKTST--------------------------Gf~~~gA-t~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~ 212 (260)
T 1p1x_A 160 IKAGADFIKTST--------------------------GKVAVNA-TPESARIMMEVIRDMGVEKTVGFKPAGGVRTAED 212 (260)
T ss_dssp HHTTCSEEECCC--------------------------SCSSCCC-CHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHH
T ss_pred HHhCCCEEEeCC--------------------------CCCCCCC-CHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHH
Confidence 999999997621 1111222 1222223333211 1 2 3699999999999999
Q ss_pred HHHHHHhCCC
Q psy16199 731 ALQFIQAGAH 740 (842)
Q Consensus 731 a~~~l~~GA~ 740 (842)
+.+++.+||+
T Consensus 213 al~~i~aga~ 222 (260)
T 1p1x_A 213 AQKYLAIADE 222 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 9999999876
No 300
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.38 E-value=0.00081 Score=68.39 Aligned_cols=91 Identities=19% Similarity=0.179 Sum_probs=70.9
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
...++++.+...|+..+.++.. +..|..+|. .++.++++++.. ++|||++||
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~----------------------~~~g~~~g~-----~~~~i~~~~~~~-~~Pvia~~g 182 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSI----------------------DRDGTKSGY-----DTEMIRFVRPLT-TLPIIASGG 182 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEET----------------------TTTTCCSCC-----CHHHHHHHGGGC-CSCEEEESC
T ss_pred CHHHHHHHHhhcCCCeEEEEec----------------------CCCCccccc-----cHHHHHHHHHhc-CCCEEecCC
Confidence 5678888889999987877431 011222332 278889998887 799999999
Q ss_pred cCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 725 IDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 725 I~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
+.+++|+.+++.+||++|.++++++ .++.-+.++++.++
T Consensus 183 ~~~~~~~~~~~~~G~~~~~vg~a~~-~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 183 AGKMEHFLEAFLAGADAALAASVFH-FREIDVRELKEYLK 221 (237)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHH-TTSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCcHHHhhhHHHH-cCCCCHHHHHHHHH
Confidence 9999999999999999999999998 45777877766543
No 301
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.38 E-value=0.00039 Score=77.61 Aligned_cols=93 Identities=20% Similarity=0.252 Sum_probs=64.3
Q ss_pred cEEEEcCChhHHHHHHHHHH---cCCcEEEEEEeecCccc-cC---------C-----HHHHHHHHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALR---CGANKVLVVFRKGCTNI-RA---------V-----PEEVQLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~---~G~~~Vtlv~r~~~~~~-~~---------~-----~~~~~~~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||..|+.+|..|.+ .|. +|+|+++++.... +. . ....+.+.+.|++++.+ .++.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~-~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKA-DVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGS-EEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 59999999999999999999 776 4999998763211 00 0 00123345679999977 7888
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+..++.. |++.+. +++..++.+|.||+|+|.+|
T Consensus 81 i~~~~~~---V~~~~g-----------~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 81 IDAKSSM---VYYTKP-----------DGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp EETTTTE---EEEECT-----------TSCEEEEECSEEEECCCCEE
T ss_pred EeCCCCE---EEEccC-----------CcccceeeCCEEEECCCCCc
Confidence 8643332 444432 23345799999999999983
No 302
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.37 E-value=0.0011 Score=71.12 Aligned_cols=93 Identities=11% Similarity=0.189 Sum_probs=57.3
Q ss_pred CccEEEEecC-ChhcHHHHHHHHHH-CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 632 KIPFFVKLTP-NITNITDIAKAAYE-GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 632 ~~Pv~vKl~p-~~~~~~~~a~~~~~-~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
+.|+++-+.. +..++.+.++.+.+ .|+|+|.+. +.. |... ++...+|+ . .....+.+++
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~--~~~-----------p~~~-~g~~~~g~---~--~~~~~eii~~ 158 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELN--ISC-----------PNVK-HGGQAFGT---D--PEVAAALVKA 158 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEE--CCS-----------EEGG-GTTEEGGG---C--HHHHHHHHHH
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEe--CCC-----------CCCC-CchhhhcC---C--HHHHHHHHHH
Confidence 4566666644 35577788888888 999999883 111 1110 00011111 1 2344788888
Q ss_pred HHhhCCCCcEEE--ecCcCCHHHH-HHHHHhCCCEEEE
Q psy16199 710 IAKMFPNFPILG--IGGIDSADVA-LQFIQAGAHAVQI 744 (842)
Q Consensus 710 i~~~~~~ipIi~--~GGI~t~~da-~~~l~~GA~~Vqv 744 (842)
+++.+ ++||+. +.++.+..++ ..+..+|++.|.+
T Consensus 159 v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 159 CKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHC-SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHhc-CCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 88887 688775 3366676774 4555699999988
No 303
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=97.37 E-value=0.0031 Score=70.09 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=104.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+..++.. .+++++.+.++++.++|++.|.++++ .+++...+++++||+.+ ++++.+....
T Consensus 135 vp~~~~~g~-~~~e~~~~~a~~~~~~Gf~~vKik~g---------------~~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 135 IPLGLVLGA-GEPEAVAEEALAVLREGFHFVKLKAG---------------GPLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EEBCEECCC-SCHHHHHHHHHHHHHHTCSCEEEECC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred cceEEECCC-CCHHHHHHHHHHHHHhhhhheeeccc---------------CCHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 345555422 47899999999888889999999864 25677788999999985 6899999865
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~~~~~~~~l~~~~-~iPI 243 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIEQ-----------------P-----------------LPAWDLDGMARLRGKV-ATPI 243 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEEC-----------------C-----------------SCTTCHHHHHHHHTTC-SSCE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEC-----------------C-----------------CChhhHHHHHHHHhhC-CCCE
Confidence 44 47778999999998885521 1 1122377788888887 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
++.+.+.+.+++.+++..| ++.||+=-.-.
T Consensus 244 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 274 (397)
T 2qde_A 244 YADESAQELHDLLAIINKGAADGLMIKTQKA 274 (397)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 9999999999999999965 89999865544
No 304
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=97.37 E-value=0.0033 Score=69.76 Aligned_cols=126 Identities=12% Similarity=0.018 Sum_probs=100.6
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHHHH
Q psy16199 575 NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITDIA 650 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~~a 650 (842)
+++++.+.++++.+.|++.|.++++++ +++...+++++|++.+ ++++.+.....+ .+..+++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~--------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~ 230 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA--------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYA 230 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS--------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC--------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHH
Confidence 788999999888888999999997652 3567788999999876 689999886544 4778899
Q ss_pred HHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHH
Q psy16199 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV 730 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~d 730 (842)
+.+++.|++.|-= | +.+..++..+++++.+ ++||++.+.+.+.++
T Consensus 231 ~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 275 (392)
T 1tzz_A 231 KMLRDYPLFWYEE-----------------V-----------------GDPLDYALQAALAEFY-PGPMATGENLFSHQD 275 (392)
T ss_dssp HHHTTSCCSEEEC-----------------C-----------------SCTTCHHHHHHHTTTC-CSCEEECTTCCSHHH
T ss_pred HHHHHcCCCeecC-----------------C-----------------CChhhHHHHHHHHhhC-CCCEEECCCCCCHHH
Confidence 9999998886521 1 1122377788888887 699999999999999
Q ss_pred HHHHHHhC-----CCEEEEehhhh
Q psy16199 731 ALQFIQAG-----AHAVQICSAVQ 749 (842)
Q Consensus 731 a~~~l~~G-----A~~Vqv~ta~l 749 (842)
+.+++..| ++.||+--.-+
T Consensus 276 ~~~~i~~~~~~~~~d~v~ik~~~~ 299 (392)
T 1tzz_A 276 ARNLLRYGGMRPDRDWLQFDCALS 299 (392)
T ss_dssp HHHHHHHSCCCTTTCEECCCTTTT
T ss_pred HHHHHHcCCCccCCcEEEECcccc
Confidence 99999987 99999865544
No 305
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=97.36 E-value=0.0015 Score=72.70 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=100.2
Q ss_pred CHhHHHHHHHHHhhcCcCEEEEec------cCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--h
Q psy16199 575 NKDDWLELSKKTEKAGADALELNL------SCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--T 644 (842)
Q Consensus 575 ~~e~~~~~a~~~~~agaD~ielN~------scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~ 644 (842)
+++++.+.++++.++|+++|.+++ +++...... |.....+.+...+++++||+.+ ++++.+.....+ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~--g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~~ 223 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLE--GPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDLV 223 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCS--SSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCccc--CCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHH
Confidence 789999999988888999999996 432111111 1111124567789999999976 689999986544 4
Q ss_pred cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecC
Q psy16199 645 NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGG 724 (842)
Q Consensus 645 ~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GG 724 (842)
+..++++.+++.|++.|-- | +.+..++..+++++.+ ++||++.+.
T Consensus 224 ~ai~~~~~l~~~~i~~iE~-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~ 268 (403)
T 2ox4_A 224 SAIQFAKAIEEFNIFFYEE-----------------I-----------------NTPLNPRLLKEAKKKI-DIPLASGER 268 (403)
T ss_dssp HHHHHHHHHGGGCEEEEEC-----------------C-----------------SCTTSTHHHHHHHHTC-CSCEEECTT
T ss_pred HHHHHHHHHHhhCCCEEeC-----------------C-----------------CChhhHHHHHHHHHhC-CCCEEecCC
Confidence 7788999999888765421 1 1122366778888888 799999999
Q ss_pred cCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 725 IDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 725 I~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
+.+.+++.+++..| ++.||+--.-.
T Consensus 269 ~~~~~~~~~~i~~~~~d~v~ik~~~~ 294 (403)
T 2ox4_A 269 IYSRWGFLPFLEDRSIDVIQPDLGTC 294 (403)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCHHHH
T ss_pred cCCHHHHHHHHHcCCCCEEecCcccc
Confidence 99999999999976 88988754443
No 306
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=97.35 E-value=0.00085 Score=74.53 Aligned_cols=141 Identities=14% Similarity=0.077 Sum_probs=103.6
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCC---CCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGM---GERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNI 646 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~---~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~ 646 (842)
.+++++.+.++++.++|+++|.+++++.... ....+|.+...+++...+++++||+.+ ++++.+.....+ .+.
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a 215 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDET 215 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 5789999999988888999999998753100 001123232345677889999999976 689999986544 477
Q ss_pred HHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcC
Q psy16199 647 TDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGID 726 (842)
Q Consensus 647 ~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~ 726 (842)
.++++.+++.|++.|-- | +.+..++..+++++.+ ++||++.+.+.
T Consensus 216 ~~~~~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~ipIa~dE~~~ 260 (392)
T 2poz_A 216 IRFCRKIGELDICFVEE-----------------P-----------------CDPFDNGALKVISEQI-PLPIAVGERVY 260 (392)
T ss_dssp HHHHHHHGGGCEEEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCEEECTTCC
T ss_pred HHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCCEEecCCcC
Confidence 88999999888665421 1 1222377788888888 79999999999
Q ss_pred CHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 727 SADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 727 t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
+.+++.+++..| ++.||+--.-.
T Consensus 261 ~~~~~~~~i~~~~~d~v~ik~~~~ 284 (392)
T 2poz_A 261 TRFGFRKIFELQACGIIQPDIGTA 284 (392)
T ss_dssp HHHHHHHHHTTTCCSEECCCTTTS
T ss_pred CHHHHHHHHHcCCCCEEecCcccc
Confidence 999999999876 89998754433
No 307
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.34 E-value=0.0023 Score=65.51 Aligned_cols=166 Identities=17% Similarity=0.056 Sum_probs=110.0
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEecc----CCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLS----CPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP 641 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~s----cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p 641 (842)
+..||.+ .+...+.+.++.++++|+|++++.+- +||. .+| + ++++++|+.++. =+++.-
T Consensus 16 i~psila-~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~----t~G------~----~~v~~lr~~~~~--DvhLMv 78 (237)
T 3cu2_A 16 LSVGILS-ANWLQLNEEVTTLLENQINVLHFDIADGQFSSLF----TVG------A----IGIKYFPTHCFK--DVHLMV 78 (237)
T ss_dssp EEEEGGG-SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB----CBC------T----HHHHTSCTTSEE--EEEEEC
T ss_pred EEEeeee-CCcccHHHHHHHHHHcCCCEEEEEEecCccccch----hhh------H----HHHHHHhhhCCC--CeEEEE
Confidence 6788875 47778888889998889999888751 3532 111 1 566777766533 445532
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCCC-----------c------------cccCCCCC-CCC----C---cccCC-Ccc
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTVS-----------G------------LMSLSADG-NPW----P---AVGTK-KLT 689 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~~-----------~------------~~~~~~~~-~~~----p---~~~~~-~~~ 689 (842)
.+...+++.+.++|+|+|+++--.. . ..++.+.. ++. + .++.- -.+
T Consensus 79 --~~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMs 156 (237)
T 3cu2_A 79 --RNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLT 156 (237)
T ss_dssp --SCHHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEES
T ss_pred --ECHHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeee
Confidence 2556778888888888888874211 1 11222211 110 1 11100 012
Q ss_pred ccCCCCCCccccchHHHHHHHHhhCC----CCcEEEecCcCCHHHHHHHHH--hCCCEEEEehhhhcc
Q psy16199 690 TYGGVSGNATRPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQ--AGAHAVQICSAVQNQ 751 (842)
Q Consensus 690 ~~gG~sG~~~~p~al~~v~~i~~~~~----~ipIi~~GGI~t~~da~~~l~--~GA~~Vqv~ta~l~~ 751 (842)
...|+.|..-.|..++.++++++..+ +++|...||| +.+.+.+++. +||+.+-+||+++..
T Consensus 157 v~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 157 LDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSM-TLELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp EETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC-CHHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred eccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCc-CHHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 35667777767788888888887753 4899999999 5899999999 999999999999954
No 308
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.33 E-value=0.00037 Score=74.77 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=62.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc--------------ccCC----HHHH-----HHHHhcCcEEecC
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN--------------IRAV----PEEV-----QLAWEEKCEFLPF 205 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~--------------~~~~----~~~~-----~~~~~~gV~i~~~ 205 (842)
+|+|||||..|+.+|..|.+.|.+ |+++++.+... .+.. ..++ +.+.+.+++++++
T Consensus 9 ~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 9 DITIIGGGPVGLFTAFYGGMRQAS-VKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCC-EEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 499999999999999999999975 99999865210 1111 1221 2234568999999
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEcccc
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGS 255 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~ 255 (842)
+.++.+...++....|.+.+ + ++.+|.||+|+|.
T Consensus 88 ~~v~~i~~~~~~~~~v~~~~-------------g---~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTNE-------------E---THYSKTVIITAGN 121 (332)
T ss_dssp CCEEEEEECTTSCEEEEESS-------------E---EEEEEEEEECCTT
T ss_pred CEEEEEEECCCCcEEEEECC-------------C---EEEeCEEEECCCC
Confidence 99998874333122233322 2 3889999999998
No 309
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.32 E-value=0.00041 Score=77.77 Aligned_cols=32 Identities=34% Similarity=0.566 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||..|+.+|..|++.|.+ |+|+++.+
T Consensus 29 dViIIGgG~AGl~aA~~La~~G~~-V~llEk~~ 60 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRGRR-VLVIDHAR 60 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-EEEEeCCC
Confidence 499999999999999999999975 99999865
No 310
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.30 E-value=0.0023 Score=64.94 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=82.3
Q ss_pred HHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEE
Q psy16199 584 KKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSA 663 (842)
Q Consensus 584 ~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v 663 (842)
+++.++|||++-|. |. +|. ..++.+.+.++..++. ++-+++=+.+..+ .+.+.+.|.+.|.+
T Consensus 76 ~~~~~~Gad~Vll~----~s--er~------l~~~e~~~~~~~a~~~-Gl~~iv~v~~~~e-----~~~~~~~~~~~i~~ 137 (219)
T 2h6r_A 76 EAIKDCGCKGTLIN----HS--EKR------MLLADIEAVINKCKNL-GLETIVCTNNINT-----SKAVAALSPDCIAV 137 (219)
T ss_dssp HHHHHHTCCEEEES----BT--TBC------CBHHHHHHHHHHHHHH-TCEEEEEESSSHH-----HHHHTTTCCSEEEE
T ss_pred HHHHHcCCCEEEEC----Cc--ccc------CCHHHHHHHHHHHHHC-CCeEEEEeCCchH-----HHHHHhCCCCEEEE
Confidence 44556799999993 32 121 3345677888777765 6666666666422 34556667775655
Q ss_pred ecCCCccccCCCCCCCCCcccCCCccccCCCCC---Cccccc-hHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCC
Q psy16199 664 INTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG---NATRPM-GLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGA 739 (842)
Q Consensus 664 ~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG---~~~~p~-al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA 739 (842)
.|... . | .| ....|. ....++.+++...++||+..|||.+++++..+...||
T Consensus 138 ~~~~~----------------------i-G-tG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~ga 193 (219)
T 2h6r_A 138 EPPEL----------------------I-G-TGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGA 193 (219)
T ss_dssp CCCC--------------------------------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTC
T ss_pred Eeccc----------------------c-c-cCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCC
Confidence 33211 0 1 22 111111 2334444444433699999999999999999999999
Q ss_pred CEEEEehhhhccCchhHHHHHHHH
Q psy16199 740 HAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 740 ~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
|+|-||++++.. .+ +.++.++|
T Consensus 194 DgvlVGsAi~~~-~d-~~~~~~~l 215 (219)
T 2h6r_A 194 EGVLLASGVVKA-KN-VEEAIREL 215 (219)
T ss_dssp CCEEESHHHHTC-SS-HHHHHHHH
T ss_pred CEEEEcHHHhCc-cc-HHHHHHHH
Confidence 999999999943 33 34444443
No 311
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.30 E-value=0.0017 Score=72.64 Aligned_cols=123 Identities=18% Similarity=0.137 Sum_probs=88.3
Q ss_pred HhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEec
Q psy16199 586 TEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAIN 665 (842)
Q Consensus 586 ~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~n 665 (842)
+..+|||+|=|+.++ .+.+.+.++++..++ .+.-++|=+.- ..+ ++.+.+.|++.|-+.|
T Consensus 126 a~~~GAD~ILLi~a~--------------l~~~~l~~l~~~a~~-lgm~~LvEvh~----~eE-~~~A~~lga~iIGinn 185 (452)
T 1pii_A 126 ARYYQADACLLMLSV--------------LDDDQYRQLAAVAHS-LEMGVLTEVSN----EEE-QERAIALGAKVVGINN 185 (452)
T ss_dssp HHHTTCSEEEEETTT--------------CCHHHHHHHHHHHHH-TTCEEEEEECS----HHH-HHHHHHTTCSEEEEES
T ss_pred HHHcCCCEEEEEccc--------------CCHHHHHHHHHHHHH-cCCeEEEEeCC----HHH-HHHHHHCCCCEEEEeC
Confidence 455799999999753 234678888888886 47777775542 333 5667789999888877
Q ss_pred CCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEE
Q psy16199 666 TVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 666 t~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv 744 (842)
+-... ....++...++.+..| ++++|+-|||.|++|+.++..+ |++|-|
T Consensus 186 r~L~t-----------------------------~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLV 235 (452)
T 1pii_A 186 RDLRD-----------------------------LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLI 235 (452)
T ss_dssp EETTT-----------------------------TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEE
T ss_pred CCCCC-----------------------------CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEE
Confidence 52111 1122455556656554 5899999999999999999999 999999
Q ss_pred ehhhhccCchhHHHH
Q psy16199 745 CSAVQNQDFTVVDDY 759 (842)
Q Consensus 745 ~ta~l~~gp~~~~~i 759 (842)
|+++|.. +..-..+
T Consensus 236 Gealmr~-~d~~~~~ 249 (452)
T 1pii_A 236 GSALMAH-DDLHAAV 249 (452)
T ss_dssp CHHHHTC-SCHHHHH
T ss_pred cHHHcCC-cCHHHHH
Confidence 9999954 4443333
No 312
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.30 E-value=0.00072 Score=76.26 Aligned_cols=96 Identities=10% Similarity=0.211 Sum_probs=65.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCcccc--CCHH----------------HHHHHHhcCcEEecCCCce
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIR--AVPE----------------EVQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~--~~~~----------------~~~~~~~~gV~i~~~~~v~ 209 (842)
||||||||+.|+.+|..|++.|.+ +|+|+++++..... ..+. ......+.+++++.++.++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 599999999999999999998853 49999987532110 0010 0122346799999998888
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+......+ .+... .+++..++.+|.+|+|||.+|
T Consensus 82 ~id~~~~~~---~~~~~----------~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 82 AINDERQTV---SVLNR----------KTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp EEETTTTEE---EEEET----------TTTEEEEEECSEEEECCCEEE
T ss_pred EEEccCcEE---EEEec----------cCCceEEEEcCEEEECCCCcc
Confidence 887433322 22221 134556899999999999984
No 313
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.29 E-value=0.00037 Score=74.98 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=63.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec----C-----------ccccCC-----HHH-----HHHHHhcCcEEe
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG----C-----------TNIRAV-----PEE-----VQLAWEEKCEFL 203 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~----~-----------~~~~~~-----~~~-----~~~~~~~gV~i~ 203 (842)
+|+|||||..|+.+|..|++.|.+ |+|+++.+ . ...+.. ..+ .+.+.+.|++++
T Consensus 24 ~vvIIG~G~aGl~aA~~l~~~g~~-v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 102 (338)
T 3itj_A 24 KVTIIGSGPAAHTAAIYLARAEIK-PILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEII 102 (338)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-CEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEEE
Confidence 499999999999999999999986 99999843 0 001111 112 223456799999
Q ss_pred cCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 204 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 204 ~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.++ ++.+...++.+. +.... +++..++.+|.||+|+|..|
T Consensus 103 ~~~-v~~i~~~~~~~~-v~~~~------------~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 103 TET-VSKVDLSSKPFK-LWTEF------------NEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp CSC-EEEEECSSSSEE-EEETT------------CSSSCCEEEEEEEECCCEEE
T ss_pred EeE-EEEEEEcCCEEE-EEEEe------------cCCCcEEEeCEEEECcCCCc
Confidence 987 888875444432 32211 01223688999999999873
No 314
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.28 E-value=0.0058 Score=62.31 Aligned_cols=124 Identities=16% Similarity=0.182 Sum_probs=88.0
Q ss_pred cCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCC
Q psy16199 589 AGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVS 668 (842)
Q Consensus 589 agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~ 668 (842)
+|||+|=|-.++- +.+.+.++++..++ .++-++|-+. +..+ ++.+.+.|++-|-+-|+--
T Consensus 125 ~GADaILLI~a~L--------------~~~~l~~l~~~A~~-lGl~~LvEVh----~~~E-l~rAl~~~a~iIGINNRnL 184 (258)
T 4a29_A 125 LGADTVLLIVKIL--------------TERELESLLEYARS-YGMEPLILIN----DEND-LDIALRIGARFIGIMSRDF 184 (258)
T ss_dssp HTCSEEEEEGGGS--------------CHHHHHHHHHHHHH-TTCCCEEEES----SHHH-HHHHHHTTCSEEEECSBCT
T ss_pred cCCCeeehHHhhc--------------CHHHHHHHHHHHHH-HhHHHHHhcc----hHHH-HHHHhcCCCcEEEEeCCCc
Confidence 5999999976542 34667777776664 5666666543 3344 4566678999887766521
Q ss_pred ccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehh
Q psy16199 669 GLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSA 747 (842)
Q Consensus 669 ~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta 747 (842)
.+ ..+.+....+++...| ++.+|+-+||.|++|+.++..+|+++|-||++
T Consensus 185 ~t-----------------------------f~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGea 235 (258)
T 4a29_A 185 ET-----------------------------GEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSS 235 (258)
T ss_dssp TT-----------------------------CCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHH
T ss_pred cc-----------------------------cccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHH
Confidence 11 1223556667777775 48899999999999999999999999999999
Q ss_pred hhccCchhHHHHHHH
Q psy16199 748 VQNQDFTVVDDYITG 762 (842)
Q Consensus 748 ~l~~gp~~~~~i~~~ 762 (842)
+|.. ++-.+++.+|
T Consensus 236 lmr~-~d~~~~Li~G 249 (258)
T 4a29_A 236 LMRN-PEKIKELIEG 249 (258)
T ss_dssp HHHC-TTHHHHHHC-
T ss_pred HhCC-CcHHHHHHcC
Confidence 9965 6666666554
No 315
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=97.28 E-value=0.0037 Score=69.43 Aligned_cols=137 Identities=12% Similarity=0.056 Sum_probs=104.7
Q ss_pred cceEEEecc--CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEe
Q psy16199 564 SILIASIMC--TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKL 639 (842)
Q Consensus 564 ~pvi~si~~--g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl 639 (842)
.|+..++.. +.+++++.+.++++.++|++.|.++++. .+++...+++++||+.+ ++++.++.
T Consensus 162 vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~--------------~~~~~d~e~v~avR~avG~d~~l~vDa 227 (398)
T 2pp0_A 162 VQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQ--------------PNCAEDIRRLTAVREALGDEFPLMVDA 227 (398)
T ss_dssp EEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCC--------------SCHHHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred eeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCC--------------CCHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 455555421 1378999999998888899999998642 24677889999999985 68999998
Q ss_pred cCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 640 TPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 640 ~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
...+ .+..++++.+++.|++.|-- | +.+..++..+++++.+ ++
T Consensus 228 n~~~~~~~ai~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~i 272 (398)
T 2pp0_A 228 NQQWDRETAIRMGRKMEQFNLIWIEE-----------------P-----------------LDAYDIEGHAQLAAAL-DT 272 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGTCSCEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SS
T ss_pred CCCCCHHHHHHHHHHHHHcCCceeeC-----------------C-----------------CChhhHHHHHHHHhhC-CC
Confidence 6544 47788999999998875421 1 1122377778888888 79
Q ss_pred cEEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 718 PILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
||++.+.+.+.+++.+++..| ++.||+--.-.
T Consensus 273 PIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 305 (398)
T 2pp0_A 273 PIATGEMLTSFREHEQLILGNASDFVQPDAPRV 305 (398)
T ss_dssp CEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH
T ss_pred CEEecCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 999999999999999999976 89998755444
No 316
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.27 E-value=0.001 Score=73.44 Aligned_cols=95 Identities=20% Similarity=0.280 Sum_probs=69.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc------------------c-cC----------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN------------------I-RA---------------------- 187 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~------------------~-~~---------------------- 187 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++..... + +.
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~-V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLK-TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 399999999999999999999985 99999875210 0 00
Q ss_pred --CH-----------------H-HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECC
Q psy16199 188 --VP-----------------E-EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKAN 247 (842)
Q Consensus 188 --~~-----------------~-~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D 247 (842)
.. . ..+.+.+.|++++.++.++++...++++.+|.+.+ .++..++.+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~------------~~~~~~~~a~ 152 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRH------------NNEIVDVRAK 152 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEE------------TTEEEEEEEE
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEE------------CCeEEEEEcC
Confidence 00 0 01223456999999999999876677777777754 2344589999
Q ss_pred EEEEccccC
Q psy16199 248 YIISAFGST 256 (842)
Q Consensus 248 ~Vi~a~G~~ 256 (842)
.||.|.|..
T Consensus 153 ~vV~A~G~~ 161 (397)
T 3cgv_A 153 MVIAADGFE 161 (397)
T ss_dssp EEEECCCTT
T ss_pred EEEECCCcc
Confidence 999999976
No 317
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.25 E-value=0.0011 Score=76.47 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=70.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc-------cc-----------------------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN-------IR----------------------------------- 186 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~-------~~----------------------------------- 186 (842)
+|+|||||..|+-+|..|++.|.+ |+|+++.+... .+
T Consensus 9 dVvIVGgG~aGl~aA~~La~~G~~-V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 9 DLIVIGGGPGGSTLASFVAMRGHR-VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCC-EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 499999999999999999999975 99999775100 00
Q ss_pred --------------------CCHH-----HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCce
Q psy16199 187 --------------------AVPE-----EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQR 241 (842)
Q Consensus 187 --------------------~~~~-----~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~ 241 (842)
.... ..+.+.+.|++++.++.++++..+++++.+|.+... +|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~-----------dG~~ 156 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNT-----------EGVE 156 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECS-----------SSCE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeC-----------CCCE
Confidence 0000 112234569999999999998866777777776542 3444
Q ss_pred EEEECCEEEEccccC
Q psy16199 242 IKLKANYIISAFGST 256 (842)
Q Consensus 242 ~~i~~D~Vi~a~G~~ 256 (842)
.++.+|.||.|+|..
T Consensus 157 ~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 157 LMAHARFIVDASGNR 171 (512)
T ss_dssp EEEEEEEEEECCCTT
T ss_pred EEEEcCEEEECCCcc
Confidence 689999999999987
No 318
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=97.23 E-value=0.0033 Score=69.46 Aligned_cols=136 Identities=7% Similarity=0.002 Sum_probs=101.9
Q ss_pred cceEEEecc-CCCH---hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEE
Q psy16199 564 SILIASIMC-TYNK---DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFV 637 (842)
Q Consensus 564 ~pvi~si~~-g~~~---e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~v 637 (842)
.|+.+++.. ..++ +++.+.++++.++|++.|.+++++ .+++...+++++||+.+ ++++.+
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~--------------~~~~~d~e~v~avR~a~G~d~~l~v 189 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG--------------TSFKEDVRHINALQHTAGSSITMIL 189 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS--------------SCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC--------------CCHHHHHHHHHHHHHhhCCCCEEEE
Confidence 455554411 1467 889999988888899999998754 24677889999999886 689999
Q ss_pred EecCCh--hcHHHHHHHHHHC-CCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 638 KLTPNI--TNITDIAKAAYEG-KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 638 Kl~p~~--~~~~~~a~~~~~~-G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
.....+ .+..++++.+++. |++.|- .| +.+..++..+++++.+
T Consensus 190 Dan~~~~~~~a~~~~~~l~~~~~i~~iE-----------------qP-----------------~~~~d~~~~~~l~~~~ 235 (382)
T 2gdq_A 190 DANQSYDAAAAFKWERYFSEWTNIGWLE-----------------EP-----------------LPFDQPQDYAMLRSRL 235 (382)
T ss_dssp ECTTCCCHHHHHTTHHHHTTCSCEEEEE-----------------CC-----------------SCSSCHHHHHHHHTTC
T ss_pred ECCCCCCHHHHHHHHHHHhhccCCeEEE-----------------CC-----------------CCcccHHHHHHHHhhC
Confidence 986544 4677888888888 765442 01 1122377778888887
Q ss_pred CCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhh
Q psy16199 715 PNFPILGIGGIDSADVALQFIQAG-AHAVQICSAV 748 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~ 748 (842)
++||++.+.+.+.+++.+++..| ++.||+=-.-
T Consensus 236 -~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 269 (382)
T 2gdq_A 236 -SVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMH 269 (382)
T ss_dssp -SSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTT
T ss_pred -CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccc
Confidence 79999999999999999999976 8999875433
No 319
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.22 E-value=0.0016 Score=76.06 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=45.4
Q ss_pred HHhcCcEEecCCCceEEEccC-CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhc
Q psy16199 195 AWEEKCEFLPFMSPVQVDVKD-NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI 266 (842)
Q Consensus 195 ~~~~gV~i~~~~~v~~v~~~~-~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l 266 (842)
+.+.||++++++.++++..++ +++.+|++.+. +|+..++.+|.||+|+|..+.+.++++..
T Consensus 265 ~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~-----------~G~~~~i~A~~VVlAtGg~~~~~~~~~~~ 326 (572)
T 1d4d_A 265 AVKRGTDIRLNSRVVRILEDASGKVTGVLVKGE-----------YTGYYVIKADAVVIAAGGFAKNNERVSKY 326 (572)
T ss_dssp HHHTTCEEESSEEEEEEEEC--CCEEEEEEEET-----------TTEEEEEECSEEEECCCCCTTCHHHHHHH
T ss_pred HHHcCCeEEecCEEEEEEECCCCeEEEEEEEeC-----------CCcEEEEEcCEEEEeCCCCccCHHHHHHh
Confidence 345689999999999986555 78888877641 34556799999999999875666666554
No 320
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.22 E-value=0.00051 Score=77.30 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=60.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCC-cEEEEEEeecCccc-cCCHHH-------------HH-HHHhcCcEEecCCCceEE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGA-NKVLVVFRKGCTNI-RAVPEE-------------VQ-LAWEEKCEFLPFMSPVQV 211 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~-~~Vtlv~r~~~~~~-~~~~~~-------------~~-~~~~~gV~i~~~~~v~~v 211 (842)
++|||||||+.|+.+|..|.+.+. -+||||++++.... |..... ++ .+.+.||+++.+ .++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 469999999999999999998763 25999998864322 111110 11 123458888765 67777
Q ss_pred EccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 212 ~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
..++.. |++. +| .++++|.+|+|+|.+
T Consensus 82 d~~~~~---V~~~-------------~g--~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 82 DPDANT---VTTQ-------------SG--KKIEYDYLVIATGPK 108 (430)
T ss_dssp ETTTTE---EEET-------------TC--CEEECSEEEECCCCE
T ss_pred ECCCCE---EEEC-------------CC--CEEECCEEEEeCCCC
Confidence 643332 2332 22 268999999999986
No 321
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=97.21 E-value=0.0047 Score=68.62 Aligned_cols=160 Identities=9% Similarity=-0.023 Sum_probs=112.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCC-----CC--CCcccCC--CCHHHHHHHHHHHHhhC--C
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMG-----ER--GMGLACG--QDPEMVRNISLWVRSSV--K 632 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~-----~~--~~G~~~~--~~~~~~~~ii~~v~~~~--~ 632 (842)
.|+.+++. +.+++++.+.++...+.|+.++-+.++++.... .. .-|..+. ++.+...+++++||+.+ +
T Consensus 123 v~~y~~~~-~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d 201 (401)
T 3sbf_A 123 IPVYTHAT-SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQ 201 (401)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCC
Confidence 46666654 468999999998887789999999998752100 00 0111111 11466778899999986 6
Q ss_pred ccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHH
Q psy16199 633 IPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSI 710 (842)
Q Consensus 633 ~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i 710 (842)
++|.+.....++ +..++++.+++.|++.|-- |. .|..++..+++
T Consensus 202 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq-----------------P~-----------------~~~~~~~~~~l 247 (401)
T 3sbf_A 202 FHILHDVHERLFPNQAIQFAKEVEQYKPYFIED-----------------IL-----------------PPNQTEWLDNI 247 (401)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC-----------------SS-----------------CTTCGGGHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC-----------------CC-----------------ChhHHHHHHHH
Confidence 899999876544 7788999999998876631 10 11124456778
Q ss_pred HhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 711 AKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 711 ~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
++.+ ++||++.+.+.+.+|+.+++..| +|.||+--.-. .|..-..++.
T Consensus 248 ~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~kia 296 (401)
T 3sbf_A 248 RSQS-SVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQI-GGITPALKLG 296 (401)
T ss_dssp HTTC-CCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG-TSHHHHHHHH
T ss_pred HhhC-CCCEEeCCccCCHHHHHHHHhcCCCCEEecCcccc-CCHHHHHHHH
Confidence 8887 69999999999999999999976 89999877666 4554444443
No 322
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=97.21 E-value=0.0046 Score=68.03 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=105.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+.+++....+++++.+.++++.+.|++.|.++++++. .+++.-.+.+++||+.+ ++++.+....
T Consensus 135 v~~y~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~g------------~~~~~d~~~v~avR~a~g~~~~l~vDan~ 202 (374)
T 3sjn_A 135 IRCYGTFIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMG------------DDPDTDYAIVKAVREAAGPEMEVQIDLAS 202 (374)
T ss_dssp EEEEEEECCCSSGGGGHHHHHHHHTTTCSEEEEECTTTT------------SCHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEeccCCCC------------CCHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 344444421223488999898888889999999998751 45788889999999985 6899999876
Q ss_pred Chh---cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 642 NIT---NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 642 ~~~---~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
.++ +..++++.+++.|++.|-= | +.|-.++..+++++.. ++|
T Consensus 203 ~~~d~~~A~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~~~~~~~~l~~~~-~iP 247 (374)
T 3sjn_A 203 KWHTCGHSAMMAKRLEEFNLNWIEE-----------------P-----------------VLADSLISYEKLSRQV-SQK 247 (374)
T ss_dssp TTCSHHHHHHHHHHSGGGCCSEEEC-----------------S-----------------SCTTCHHHHHHHHHHC-SSE
T ss_pred CCCCHHHHHHHHHHhhhcCceEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCC
Confidence 554 5677888898988877631 1 1122367788898888 799
Q ss_pred EEEecCcCCHHHHHHHHHh-CCCEEEEehhhh
Q psy16199 719 ILGIGGIDSADVALQFIQA-GAHAVQICSAVQ 749 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~-GA~~Vqv~ta~l 749 (842)
|++.+.+.+.+|+.+++.. .+|.||+--...
T Consensus 248 Ia~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 279 (374)
T 3sjn_A 248 IAGGESLTTRYEFQEFITKSNADIVQPDITRC 279 (374)
T ss_dssp EEECTTCCHHHHHHHHHHHHCCSEECCBTTTS
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 9999999999999999985 589998766555
No 323
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.20 E-value=0.0042 Score=66.33 Aligned_cols=169 Identities=20% Similarity=0.224 Sum_probs=98.9
Q ss_pred HHHHhhcCcCEEEEeccC-CCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEec--C-Ch---hc----------
Q psy16199 583 SKKTEKAGADALELNLSC-PHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLT--P-NI---TN---------- 645 (842)
Q Consensus 583 a~~~~~agaD~ielN~sc-P~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~--p-~~---~~---------- 645 (842)
++.+.+.|||++-+.+.. |....+-. .+..+.+.++.++.+ ..++|+++=+- | .. .+
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~-----~~q~~~l~rv~~ec~-~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~ 189 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVN-----VQKQAYIERIGSECQ-AEDIPFFLEILTYDETISNNSSVEFAKVKVHK 189 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHH-----HHHHHHHHHHHHHHH-HHTCCEEEEEEECBTTBSCTTSHHHHTTHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHH-----HHHHHHHHHHHHHHH-HcCCceEEEEeccCCCCCCCcchhhhccCHHH
Confidence 445556799999887642 32100000 011234444444443 34899998551 2 11 11
Q ss_pred HHHHHHHH--HHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCC-CCCcc--ccchHHHHHHHHhhCCCCcEE
Q psy16199 646 ITDIAKAA--YEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGV-SGNAT--RPMGLKAVSSIAKMFPNFPIL 720 (842)
Q Consensus 646 ~~~~a~~~--~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~-sG~~~--~p~al~~v~~i~~~~~~ipIi 720 (842)
+...++.+ .+.|+|.+-+-=+.. + .-..|+ .|..+ +..+.+.++++.+.. .+|+|
T Consensus 190 V~~a~R~~~~~elGaDv~Kve~p~~------------~-------~~v~g~~~~~~~y~~~ea~~~f~~~~~a~-~~P~v 249 (332)
T 3iv3_A 190 VNDAMKVFSAERFGIDVLKVEVPVN------------M-------VYVEGFAEGEVVYSKEEAAQAFREQEAST-DLPYI 249 (332)
T ss_dssp HHHHHHHHTSGGGCCSEEEECCSSC------------G-------GGBTTTCSSCCCBCHHHHHHHHHHHHHTC-SSCEE
T ss_pred HHHHHHHHhhcCcCCcEEEEecCCC------------h-------hhhcccccccccccHHHHHHHHHHHHhcC-CCCEE
Confidence 55666777 577999998821110 0 000111 22222 233456677777776 69955
Q ss_pred -EecCcCCHHHHHHHH----HhCC--CEEEEehhhhccCchhHH-HHHHHHHHHHHhcCC-CccccC
Q psy16199 721 -GIGGIDSADVALQFI----QAGA--HAVQICSAVQNQDFTVVD-DYITGLQTLLYLKST-QLKGWD 778 (842)
Q Consensus 721 -~~GGI~t~~da~~~l----~~GA--~~Vqv~ta~l~~gp~~~~-~i~~~l~~~m~~~g~-~i~~~~ 778 (842)
.+||+ +.++..+.+ .+|| ++|.+||++.+++...+- +=.+.+++||+..|. +|+++.
T Consensus 250 ~lsgG~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~ 315 (332)
T 3iv3_A 250 YLSAGV-SAELFQETLVFAHKAGAKFNGVLCGRATWAGSVQVYMEEGKEAARQWLRTSGLQNINELN 315 (332)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHTCCCCEEEECHHHHTTHHHHHHHHCHHHHHHHHTTHHHHHHHHHH
T ss_pred EECCCC-CHHHHHHHHHHHHHcCCCcceEEeeHHHHHhhhhhhccccHHHHHHHHHHHhHHHHHHHH
Confidence 79998 566666555 4899 999999999977544333 225677899999888 887764
No 324
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=97.20 E-value=0.003 Score=70.25 Aligned_cols=144 Identities=13% Similarity=0.023 Sum_probs=108.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-+++. +.+++++.+.++.+.+.|+.+|-+ +++|..... ....+++.-.+++++||+.+ +++|.+....
T Consensus 115 v~~y~~~~-~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~-----~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~ 187 (405)
T 3rr1_A 115 MRTYSWVG-GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII-----DTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG 187 (405)
T ss_dssp EEEEEECC-CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB-----CSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS
T ss_pred eeeeEeCC-CCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc-----ccchhHHHHHHHHHHHHHHhCCCceEEEECCC
Confidence 56777774 568999999999888889999999 887632110 01134567788999999987 6899998866
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-- | +.|-.++..+++++.+ ++||
T Consensus 188 ~~~~~~A~~~~~~L~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iPI 232 (405)
T 3rr1_A 188 RVSAPMAKVLIKELEPYRPLFIEE-----------------P-----------------VLAEQAETYARLAAHT-HLPI 232 (405)
T ss_dssp CBCHHHHHHHHHHHGGGCCSCEEC-----------------S-----------------SCCSSTHHHHHHHTTC-SSCE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHhcC-CCCE
Confidence 44 47778899999998876631 1 1122256678888887 7999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
++.+.+.+..|+.+++..| +|.||+--.-.
T Consensus 233 a~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~ 263 (405)
T 3rr1_A 233 AAGERMFSRFDFKRVLEAGGVSILQPDLSHA 263 (405)
T ss_dssp EECTTCCSHHHHHHHHHHCCCSEECCBTTTT
T ss_pred EecCCcCCHHHHHHHHHHhCCCeEEEChhhc
Confidence 9999999999999999975 89998865544
No 325
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.19 E-value=0.0009 Score=74.95 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=28.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
+|+|||||.+|+-+|..|++.|.+ |+|++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~-V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKK-VLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCe-EEEEecC
Confidence 399999999999999999999975 9999874
No 326
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.16 E-value=0.0011 Score=72.87 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=63.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc-------------------------------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI------------------------------------------- 185 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~------------------------------------------- 185 (842)
+|+|||||.+|+.+|..|.+.|.+ |+|+++.+....
T Consensus 13 dVvIVGaG~aGl~~A~~L~~~G~~-v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 91 (379)
T 3alj_A 13 RAEVAGGGFAGLTAAIALKQNGWD-VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSV 91 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCC-EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCcee
Confidence 499999999999999999999975 999998753210
Q ss_pred ---cC--C----------HH-HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEE
Q psy16199 186 ---RA--V----------PE-EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYI 249 (842)
Q Consensus 186 ---~~--~----------~~-~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~V 249 (842)
+. . .. ..+.+.+.|++++.++.++++.. ++ .|++.+ |+ ++.+|.|
T Consensus 92 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~---~v~~~~-------------g~--~~~ad~v 152 (379)
T 3alj_A 92 SKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG---RLTLQT-------------GE--VLEADLI 152 (379)
T ss_dssp EEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT---EEEETT-------------SC--EEECSEE
T ss_pred eeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC---EEEECC-------------CC--EEEcCEE
Confidence 00 0 00 11234456899999999999874 33 344432 22 6899999
Q ss_pred EEccccC
Q psy16199 250 ISAFGST 256 (842)
Q Consensus 250 i~a~G~~ 256 (842)
|.|+|..
T Consensus 153 V~AdG~~ 159 (379)
T 3alj_A 153 VGADGVG 159 (379)
T ss_dssp EECCCTT
T ss_pred EECCCcc
Confidence 9999987
No 327
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.14 E-value=0.00082 Score=75.99 Aligned_cols=92 Identities=18% Similarity=0.242 Sum_probs=66.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc-------------------------ccCC---------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN-------------------------IRAV--------------- 188 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~-------------------------~~~~--------------- 188 (842)
.|+|||||.+|+.+|..|++.|.+ |+|+++.+... ++..
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G~~-V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEGAN-VLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CEEEECCcHHHHHHHHHHHHCCCC-EEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 499999999999999999999975 99999764210 0000
Q ss_pred --------------------------HH-----HHHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeecc
Q psy16199 189 --------------------------PE-----EVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVED 237 (842)
Q Consensus 189 --------------------------~~-----~~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~ 237 (842)
.. ..+.+.+.||++++++.++++..+++++.+|++.+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~------------ 174 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQT------------ 174 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT------------
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECC------------
Confidence 00 01223456999999999999875566666565432
Q ss_pred CCceEEEECCEEEEccccC
Q psy16199 238 EEQRIKLKANYIISAFGST 256 (842)
Q Consensus 238 ~g~~~~i~~D~Vi~a~G~~ 256 (842)
|+ ++.||.||+|+|..
T Consensus 175 -G~--~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 175 -GE--VLETNHVVIAVGGK 190 (447)
T ss_dssp -CC--EEECSCEEECCCCS
T ss_pred -CC--EEECCEEEECCCCC
Confidence 22 58999999999977
No 328
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.13 E-value=0.00091 Score=75.70 Aligned_cols=97 Identities=16% Similarity=0.237 Sum_probs=69.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc---------------------c---------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI---------------------R--------------------- 186 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~---------------------~--------------------- 186 (842)
.|+|||||..|+.+|..|++.|.+ |+|+++.+.... +
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G~~-V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRGLK-ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSSCC-EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 499999999999999999999986 999998652100 0
Q ss_pred ----------CCHHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEE
Q psy16199 187 ----------AVPEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIIS 251 (842)
Q Consensus 187 ----------~~~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~ 251 (842)
..... .+.+.+.|++++.++.++++..+++++.+|++.+.. +|+..++.+|.||.
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~----------~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRR----------TNEELTVYSKVVVE 156 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETT----------TTEEEEEECSEEEE
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcC----------CCceEEEEcCEEEE
Confidence 00001 122345689999999999887666677667665310 24445799999999
Q ss_pred ccccC
Q psy16199 252 AFGST 256 (842)
Q Consensus 252 a~G~~ 256 (842)
|.|..
T Consensus 157 AdG~~ 161 (453)
T 3atr_A 157 ATGYS 161 (453)
T ss_dssp CCGGG
T ss_pred CcCCc
Confidence 99987
No 329
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.12 E-value=0.00064 Score=91.82 Aligned_cols=143 Identities=15% Similarity=0.168 Sum_probs=92.4
Q ss_pred cceEEEeccCCCHhHH------HHHHHHHhhcC--cCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccE
Q psy16199 564 SILIASIMCTYNKDDW------LELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~------~~~a~~~~~ag--aD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv 635 (842)
+|+-++++. .++..| .++++.+.++| +|+|-+.++.|. .+...++++.+++. ++.+
T Consensus 483 ~p~~vNl~~-~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~--------------~ee~~~~i~~l~~~-Gi~~ 546 (3089)
T 3zen_D 483 RAIQFNTLF-LDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPD--------------LEEAVDIIDELNEV-GISH 546 (3089)
T ss_dssp CCCEEEEEC-SCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCC--------------HHHHHHHHTSTTHH-HHCS
T ss_pred Cceeechhh-cChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCc--------------hhHhHHHHHHHHHc-CCEE
Confidence 577777763 355332 35677777788 888999776663 35555666666654 4554
Q ss_pred EEEecCChhcHHHHHHHHHHCCCC------EEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCc-cccchHHHHH
Q psy16199 636 FVKLTPNITNITDIAKAAYEGKAD------GVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNA-TRPMGLKAVS 708 (842)
Q Consensus 636 ~vKl~p~~~~~~~~a~~~~~~G~d------~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~-~~p~al~~v~ 708 (842)
+.=..++..+ ++.+.+.|+| +|++.+. ..||+.|.. +....+....
T Consensus 547 i~~~~~t~~~----a~~~~~i~~d~~~~~y~vv~~G~-----------------------eaGGH~g~~~~~~ll~~~~~ 599 (3089)
T 3zen_D 547 VVFKPGTVEQ----IRSVIRIAAEVPTKPVIVHIEGG-----------------------RAGGHHSWEDLDDLLLATYS 599 (3089)
T ss_dssp EEECCCSHHH----HHHHHHHHTTSTTSCEEEEECCS-----------------------SSSEECCSCCHHHHHHHHHH
T ss_pred EEEeCCCHHH----HHHHHHhhhhcCCCcEEEEEeCC-----------------------CcCCCCCcccHHHHHHHHHH
Confidence 4422344433 4455555666 7777332 234443321 2111122236
Q ss_pred HHHhhCCCCcEEEecCcCCHHHHHHHH-----------HhCCCEEEEehhhhc
Q psy16199 709 SIAKMFPNFPILGIGGIDSADVALQFI-----------QAGAHAVQICSAVQN 750 (842)
Q Consensus 709 ~i~~~~~~ipIi~~GGI~t~~da~~~l-----------~~GA~~Vqv~ta~l~ 750 (842)
++++.. ++|||+.|||.+++++..++ .+||++|||||+|+.
T Consensus 600 ~ir~~~-~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~ 651 (3089)
T 3zen_D 600 ELRSRS-NITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMA 651 (3089)
T ss_dssp HHTTCT-TEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTT
T ss_pred HHhhcC-CCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHh
Confidence 666665 79999999999999999999 999999999999994
No 330
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.12 E-value=0.00086 Score=74.71 Aligned_cols=91 Identities=16% Similarity=0.252 Sum_probs=63.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCcccc---C---------CHH-----HHHHHHhcCcEEecCCCce
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIR---A---------VPE-----EVQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~---~---------~~~-----~~~~~~~~gV~i~~~~~v~ 209 (842)
.+|+|||||..|+.+|..|++.|.+ +|+++++.+..... . ... ....+.+.+++++. ..++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 3599999999999999999999873 59999987622110 0 000 12335567999998 8888
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+...... |.+.+ + .++.+|.+|+|||.+|
T Consensus 81 ~id~~~~~---v~~~~-------------g--~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 81 SIDREGRK---LLLAS-------------G--TAIEYGHLVLATGARN 110 (404)
T ss_dssp EEETTTTE---EEESS-------------S--CEEECSEEEECCCEEE
T ss_pred EEECCCCE---EEECC-------------C--CEEECCEEEEeeCCCc
Confidence 88743332 33322 2 2689999999999873
No 331
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=97.11 E-value=0.0029 Score=70.69 Aligned_cols=150 Identities=9% Similarity=-0.031 Sum_probs=107.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCC-----------c-------ccCCCCHHHHHHHHH
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGM-----------G-------LACGQDPEMVRNISL 625 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~-----------G-------~~~~~~~~~~~~ii~ 625 (842)
.|+.+++. +.+++++.+.++...+.|+.++-+.+++|......+. | .....+.+...++++
T Consensus 133 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~ 211 (418)
T 3r4e_A 133 IMVYGHAN-GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFE 211 (418)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 45666664 4689999999988888899999999998742110000 0 000012466778899
Q ss_pred HHHhhC--CccEEEEecCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcccc
Q psy16199 626 WVRSSV--KIPFFVKLTPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701 (842)
Q Consensus 626 ~v~~~~--~~Pv~vKl~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p 701 (842)
+||+.+ +++|.+.....+ .+..++++.+++.|++.|-- |. .|
T Consensus 212 avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq-----------------P~-----------------~~ 257 (418)
T 3r4e_A 212 ELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLED-----------------CT-----------------PA 257 (418)
T ss_dssp HHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEES-----------------CS-----------------CC
T ss_pred HHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC-----------------CC-----------------Cc
Confidence 999986 689999987644 47788999999999887731 10 11
Q ss_pred chHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 702 MGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 702 ~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
..++..+++++.+ ++||++.+.+.+.+|+.+++..| +|.||+--.-.
T Consensus 258 ~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~ 305 (418)
T 3r4e_A 258 ENQEAFRLVRQHT-VTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGA 305 (418)
T ss_dssp SSGGGGHHHHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred cCHHHHHHHHhcC-CCCEEEcCCcCCHHHHHHHHHcCCCCeEecCcccc
Confidence 1234456788887 69999999999999999999976 89998766555
No 332
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.11 E-value=0.0058 Score=67.94 Aligned_cols=150 Identities=13% Similarity=0.107 Sum_probs=109.9
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~~ 649 (842)
.+++++.+.++.+.+.|+.++-+++++|... ..+ +.....+++...+.+++||+.+ +++|.++....+ .+..++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~-~~g-~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~ 227 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTI-YDG-HQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRL 227 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBT-TCS-BCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcc-ccc-ccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHH
Confidence 3688888888887778999999999887321 111 0000123667788999999986 689999987654 477889
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|++.|-- | +.|-.++..+++++.+ ++||++.+.+.+.+
T Consensus 228 ~~~l~~~~i~~iEe-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~ 272 (404)
T 4e5t_A 228 ARRLEAYDPLWFEE-----------------P-----------------IPPEKPEDMAEVARYT-SIPVATGERLCTKY 272 (404)
T ss_dssp HHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCEEECTTCCHHH
T ss_pred HHHHhhcCCcEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCCEEeCCCcCCHH
Confidence 99999999887731 1 1122367788899988 79999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 730 VALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
|+.+++..| +|.||+--.-. -|..-..++.+
T Consensus 273 ~~~~~i~~~a~d~v~~d~~~~-GGit~~~~ia~ 304 (404)
T 4e5t_A 273 EFSRVLETGAASILQMNLGRV-GGLLEAKKIAA 304 (404)
T ss_dssp HHHHHHHHTCCSEECCCTTTS-SCHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEecCcccc-CCHHHHHHHHH
Confidence 999999976 79998876666 45554444433
No 333
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.11 E-value=0.0011 Score=70.63 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=61.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEee--cCc-------cccCC----HHH-H----HHHHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRK--GCT-------NIRAV----PEE-V----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~--~~~-------~~~~~----~~~-~----~~~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||..|+.+|..|.+.|.+ |+++++. ... ..+.. ..+ . +.+.+.|++++. ..++.
T Consensus 17 ~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 17 DVIIVGLGPAAYGAALYSARYMLK-TLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred CEEEECccHHHHHHHHHHHHCCCc-EEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 499999999999999999999976 9999985 100 01111 112 1 234456899988 78888
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+...++... +...+ + .++.+|.||+|+|..|
T Consensus 95 i~~~~~~~~-v~~~~-------------g--~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 95 IENRGDEFV-VKTKR-------------K--GEFKADSVILGIGVKR 125 (323)
T ss_dssp EEEC--CEE-EEESS-------------S--CEEEEEEEEECCCCEE
T ss_pred EEecCCEEE-EEECC-------------C--CEEEcCEEEECcCCCC
Confidence 864333321 33221 2 2689999999999883
No 334
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.10 E-value=0.0071 Score=61.85 Aligned_cols=128 Identities=16% Similarity=0.107 Sum_probs=89.2
Q ss_pred cceEEEeccCC-----CHh--HHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEE
Q psy16199 564 SILIASIMCTY-----NKD--DWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFF 636 (842)
Q Consensus 564 ~pvi~si~~g~-----~~e--~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~ 636 (842)
..+|+++-+.. +++ +..++++.++++|+++|+++ .+ +.++.+++.+++|++
T Consensus 16 ~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~------------------~~----~~i~~i~~~~~~p~i 73 (234)
T 1yxy_A 16 GGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN------------------SV----RDIKEIQAITDLPII 73 (234)
T ss_dssp TSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE------------------SH----HHHHHHHTTCCSCEE
T ss_pred CCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC------------------CH----HHHHHHHHhCCCCEE
Confidence 45666665322 167 88999999999999999986 12 457888888999985
Q ss_pred EEecCC-------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHH
Q psy16199 637 VKLTPN-------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSS 709 (842)
Q Consensus 637 vKl~p~-------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~ 709 (842)
--+..+ ++...+.++.+.++|+|.|.++..... .| .|. ...+.++.
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~----------~~-------------~~~----~~~~~i~~ 126 (234)
T 1yxy_A 74 GIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRD----------RH-------------DGL----DIASFIRQ 126 (234)
T ss_dssp EECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSC----------CT-------------TCC----CHHHHHHH
T ss_pred eeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccC----------CC-------------CCc----cHHHHHHH
Confidence 212111 123456688899999999988543210 00 011 22678888
Q ss_pred HHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEE
Q psy16199 710 IAKMFPNFPILGIGGIDSADVALQFIQAGAHAV 742 (842)
Q Consensus 710 i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~V 742 (842)
+++.+++++|+. ++.+.+++.++..+|||.|
T Consensus 127 i~~~~~~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 127 VKEKYPNQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp HHHHCTTCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred HHHhCCCCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 888876666554 6889999999999999999
No 335
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.10 E-value=0.0012 Score=73.64 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=29.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||..|+.+|..|++.|.+ |+|+++.+
T Consensus 6 dViIIGgG~aGl~aA~~la~~G~~-V~vlEk~~ 37 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLGKS-VTVFDNGK 37 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 399999999999999999999975 99999875
No 336
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.09 E-value=0.00093 Score=75.27 Aligned_cols=90 Identities=18% Similarity=0.326 Sum_probs=61.9
Q ss_pred CcEEEEcCChhHHHHHHHHHH---cCCcEEEEEEeecCccc-cC---------CHHH-----HHHHHhcCcEEecCCCce
Q psy16199 148 GTVIVLGAGDTAFDCATSALR---CGANKVLVVFRKGCTNI-RA---------VPEE-----VQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~---~G~~~Vtlv~r~~~~~~-~~---------~~~~-----~~~~~~~gV~i~~~~~v~ 209 (842)
.+|||||||..|+.+|..|.+ .|.+ |||+++++.... +. ..++ ...+.+.||+++. ..++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~-Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~ 82 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHE-VTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAE 82 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSE-EEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCE-EEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEE
Confidence 459999999999999999999 6764 999998863211 11 1111 1234457999975 5888
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+..++.. |++. ++ .++.+|.||+|+|.+|
T Consensus 83 ~id~~~~~---V~~~-------------~g--~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 83 QIDAEAQN---ITLA-------------DG--NTVHYDYLMIATGPKL 112 (437)
T ss_dssp EEETTTTE---EEET-------------TS--CEEECSEEEECCCCEE
T ss_pred EEEcCCCE---EEEC-------------CC--CEEECCEEEECCCCCc
Confidence 88643332 3332 12 2689999999999983
No 337
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=97.09 E-value=0.011 Score=64.36 Aligned_cols=130 Identities=11% Similarity=0.106 Sum_probs=98.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~ 642 (842)
.|+-.++. ..+++++.+.++++.+.|++.|.++++. +++.-.+++++||+.- ++++.+.....
T Consensus 129 v~~~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~d~~~v~avr~~g~~~~l~vDan~~ 192 (345)
T 2zad_A 129 IETDKTVG-IDTVENRVKEAKKIFEEGFRVIKIKVGE---------------NLKEDIEAVEEIAKVTRGAKYIVDANMG 192 (345)
T ss_dssp EEBCEEEC-SCCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHSTTCEEEEECTTC
T ss_pred eeeeEEec-CCCHHHHHHHHHHHHHcCcCEEEEeecC---------------CHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 34445554 3478899888888888899999998643 4566677889998872 47787766543
Q ss_pred --hhcHHHHHHHHHHCCCC--EEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 643 --ITNITDIAKAAYEGKAD--GVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 643 --~~~~~~~a~~~~~~G~d--~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..+..++++.+++.|++ .|- .| +.+..++..+++++.+ ++|
T Consensus 193 ~~~~~a~~~~~~l~~~~i~~~~iE-----------------~P-----------------~~~~~~~~~~~l~~~~-~ip 237 (345)
T 2zad_A 193 YTQKEAVEFARAVYQKGIDIAVYE-----------------QP-----------------VRREDIEGLKFVRFHS-PFP 237 (345)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEE-----------------CC-----------------SCTTCHHHHHHHHHHS-SSC
T ss_pred CCHHHHHHHHHHHHhcCCCeeeee-----------------CC-----------------CCcccHHHHHHHHHhC-CCC
Confidence 34777899999999988 542 01 1222377778888888 799
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEE
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQI 744 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv 744 (842)
|++.+.+.+.+++.+++..| ++.||+
T Consensus 238 ia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 238 VAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred EEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 99999999999999999977 889987
No 338
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.08 E-value=0.0014 Score=69.73 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=28.4
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
|+|||||+.|+.+|..|+|.|.+ |+|+++..
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~-v~lie~~~ 39 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQ-IALFDNNT 39 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEECSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 99999999999999999999975 99999753
No 339
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.08 E-value=0.0019 Score=74.26 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=44.2
Q ss_pred hcCcEEecCCCceEEEcc-CCcEEEEEEEeecccCCCCeeccCCceEEEECC-EEEEccccCcCChhHHhhc
Q psy16199 197 EEKCEFLPFMSPVQVDVK-DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKAN-YIISAFGSTLLDNDVLEAI 266 (842)
Q Consensus 197 ~~gV~i~~~~~v~~v~~~-~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D-~Vi~a~G~~~~~~~l~~~l 266 (842)
+.|+++++++.++++..+ ++++.+|++.+ +++..++.|| .||+|+|--..+.++.+..
T Consensus 214 ~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~------------~g~~~~i~A~k~VVlAtGG~~~n~~m~~~~ 273 (510)
T 4at0_A 214 KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ------------YGKEVAVRARRGVVLATGSFAYNDKMIEAH 273 (510)
T ss_dssp HTTCEEECSEEEEEEEECTTCCEEEEEEEE------------TTEEEEEEEEEEEEECCCCCTTCHHHHHHH
T ss_pred HcCCEEEecCEeEEEEECCCCcEEEEEEEE------------CCcEEEEEeCCeEEEeCCChhhCHHHHHHh
Confidence 458888888888888755 57888887764 3455679997 9999999875677776654
No 340
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.07 E-value=0.0011 Score=73.40 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=65.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc----ccc--------------------------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT----NIR-------------------------------------- 186 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~----~~~-------------------------------------- 186 (842)
+|+|||||.+|+.+|..|++.|.+ |+|+++.+.. ...
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~-v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGID-NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC-EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC-EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 499999999999999999999986 9999976520 000
Q ss_pred -----------C------CHHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEE
Q psy16199 187 -----------A------VPEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 187 -----------~------~~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
. .... .+.+.+.|++++.++.++++...++....|++.+ +|+..++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~------------~g~~~~~ 150 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFER------------DGERLRL 150 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEE------------TTEEEEE
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEec------------CCcEEEE
Confidence 0 0011 1223355899999999988874322222255522 3444579
Q ss_pred ECCEEEEccccC
Q psy16199 245 KANYIISAFGST 256 (842)
Q Consensus 245 ~~D~Vi~a~G~~ 256 (842)
.+|.||.|.|..
T Consensus 151 ~a~~vV~AdG~~ 162 (394)
T 1k0i_A 151 DCDYIAGCDGFH 162 (394)
T ss_dssp ECSEEEECCCTT
T ss_pred EeCEEEECCCCC
Confidence 999999999987
No 341
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.07 E-value=0.0021 Score=72.70 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=65.3
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCccc-cC---------C--HH-----HHHHHHhcCcEEecCCCce
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTNI-RA---------V--PE-----EVQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~~-~~---------~--~~-----~~~~~~~~gV~i~~~~~v~ 209 (842)
+|+|||||..|+.+|..|++. |. +|+|+++++.... +. . .. ..+.+.+.+++++.++.++
T Consensus 4 ~VvIIGgG~AGl~aA~~L~~~~~g~-~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 4 KIVIIGASFAGISAAIASRKKYPQA-EISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSS-EEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CEEEECCCHHHHHHHHHHHhhCcCC-cEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 599999999999999999998 76 4999998863211 10 0 00 1233456799999999999
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+...+..+. +. . .++..++.+|.+|+|+|.+|
T Consensus 83 ~id~~~~~v~-v~--~------------~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 83 AMDVENQLIA-WT--R------------KEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp EEETTTTEEE-EE--E------------TTEEEEEECSEEEECCCCCB
T ss_pred EEECCCCEEE-EE--e------------cCceEEEEcCEEEECCCccc
Confidence 8874433332 22 1 12345799999999999984
No 342
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.07 E-value=0.0014 Score=76.40 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=65.7
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCccccC--C----------HH-----HHHHH-HhcCcEEecCCCc
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTNIRA--V----------PE-----EVQLA-WEEKCEFLPFMSP 208 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~~~~--~----------~~-----~~~~~-~~~gV~i~~~~~v 208 (842)
+|+|||||+.|+.+|..|.+. +. +|+++++.+...+.. . .. ....+ .+.++++++++.+
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~-~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETA-EIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSS-EEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCC-CEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 599999999999999999998 55 599999886421110 0 00 01222 3479999999999
Q ss_pred eEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+......+ .+.+. .+|+..++.+|.||+|||.+|
T Consensus 82 ~~id~~~~~v---~~~~~----------~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 82 VAIDRAAKLV---TVRRL----------LDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp EEEETTTTEE---EEEET----------TTCCEEEEECSEEEECCCEEE
T ss_pred EEEECCCCEE---EEEec----------CCCCeEEEECCEEEECCCCCC
Confidence 9997433332 23321 124456799999999999984
No 343
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.07 E-value=0.0013 Score=69.29 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=59.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc--------cccCC----HHH-HH----HHHhc-CcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT--------NIRAV----PEE-VQ----LAWEE-KCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~--------~~~~~----~~~-~~----~~~~~-gV~i~~~~~v~~ 210 (842)
+|+|||||+.|+.+|..|.+.|.+ |+++++.... .++.. ..+ .. .+.+. +++++.. .++.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRARKN-ILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCC-EEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 499999999999999999999975 9999975311 11111 112 22 22333 6777654 7777
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+...++. ..|.+. ++ .++.+|.||+|+|..|
T Consensus 82 i~~~~~~-~~v~~~-------------~g--~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 82 AKGSFGE-FIVEID-------------GG--RRETAGRLILAMGVTD 112 (297)
T ss_dssp EEEETTE-EEEEET-------------TS--CEEEEEEEEECCCCEE
T ss_pred EEEcCCe-EEEEEC-------------CC--CEEEcCEEEECCCCCC
Confidence 7643332 223332 12 2689999999999884
No 344
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.06 E-value=0.01 Score=66.13 Aligned_cols=148 Identities=18% Similarity=0.122 Sum_probs=108.2
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCChh--cHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNIT--NITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~~ 649 (842)
.+++++.+.++.+.+.|+.++-+++++|... ..+. .....+++...+.+++||+.+ ++++.+.....++ +..++
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~-~~g~-~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~ 220 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTA-YSGH-QLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRL 220 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBT-TCCB-CCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcc-cccc-ccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 4788999888887778999999999876321 1110 000123667778899999986 6899999876554 67788
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|++.|-- | +.|-.++..+++++.+ ++||++...+.+.+
T Consensus 221 ~~~L~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 265 (412)
T 4e4u_A 221 AKRLEKYDPLWFEE-----------------P-----------------VPPGQEEAIAQVAKHT-SIPIATGERLTTKY 265 (412)
T ss_dssp HHHHGGGCCSEEEC-----------------C-----------------SCSSCHHHHHHHHHTC-SSCEEECTTCCHHH
T ss_pred HHHhhhcCCcEEEC-----------------C-----------------CChhhHHHHHHHHhhC-CCCEEecCccCCHH
Confidence 99999999877631 1 1222367788899888 79999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 730 VALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
++.+++..| +|.||+--.-. -|..-..++
T Consensus 266 ~~~~~i~~~a~d~v~~d~~~~-GGit~~~ki 295 (412)
T 4e4u_A 266 EFHKLLQAGGASILQLNVARV-GGLLEAKKI 295 (412)
T ss_dssp HHHHHHHTTCCSEECCCTTTT-TSHHHHHHH
T ss_pred HHHHHHHcCCCCEEEeCcccc-CCHHHHHHH
Confidence 999999976 89998866555 344444444
No 345
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.06 E-value=0.018 Score=63.52 Aligned_cols=146 Identities=11% Similarity=0.115 Sum_probs=108.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhc-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+-.++.. .++++..+.++...+. |+..+-+.+++ .+++.-.+.+++||+.+ ++++.++..
T Consensus 138 v~~~~t~~~-~~~~~~~~~a~~~~~~~G~~~~K~Kvg~--------------~~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALGV-LPLDVAVAEIEERIEEFGNRSFKLKMGA--------------GDPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEECS-CCHHHHHHHHHHHHHHHCCSEEEEECCS--------------SCHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEeeC-CCHHHHHHHHHHHHHhcCCcEEEEeeCC--------------CCHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 355555543 4677777777765555 99999999754 24667778999999987 589999987
Q ss_pred CChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 641 PNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 641 p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..++ +..++++.+++.|++.|-= | +.+..+...+++++.. ++|
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iP 247 (383)
T 3i4k_A 203 ARWDRRTALHYLPILAEAGVELFEQ-----------------P-----------------TPADDLETLREITRRT-NVS 247 (383)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEES-----------------C-----------------SCTTCHHHHHHHHHHH-CCE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CChhhHHHHHHHHhhC-CCC
Confidence 6554 6778999999999887631 1 1122366778888887 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
|++.+.+.+.+|+.+++..| ++.||+--.-+ .|..-..++.
T Consensus 248 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~ia 289 (383)
T 3i4k_A 248 VMADESVWTPAEALAVVKAQAADVIALKTTKH-GGLLESKKIA 289 (383)
T ss_dssp EEESTTCSSHHHHHHHHHHTCCSEEEECTTTT-TSHHHHHHHH
T ss_pred EEecCccCCHHHHHHHHHcCCCCEEEEccccc-CCHHHHHHHH
Confidence 99999999999999999976 89999977666 3454444443
No 346
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.05 E-value=0.0012 Score=74.25 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=64.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCcccc------CC------HHH-----HHHHHhcCcEEecCCCce
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIR------AV------PEE-----VQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~------~~------~~~-----~~~~~~~gV~i~~~~~v~ 209 (842)
.+|+|||||..|+.+|..|.+.|.+ +|+++++.+..... .. ... .+.+.+.|++++.++.++
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 84 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQVT 84 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCEE
T ss_pred CcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEEE
Confidence 3599999999999999999999873 69999977531110 00 000 134556799999999999
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+...+.. |.+. +| .++.+|.||+|+|.+|
T Consensus 85 ~i~~~~~~---v~~~-------------~g--~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 85 AINRDRQQ---VILS-------------DG--RALDYDRLVLATGGRP 114 (431)
T ss_dssp EEETTTTE---EEET-------------TS--CEEECSEEEECCCEEE
T ss_pred EEECCCCE---EEEC-------------CC--CEEECCEEEEcCCCCc
Confidence 88743322 3332 12 2689999999999984
No 347
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.05 E-value=0.0013 Score=73.36 Aligned_cols=92 Identities=17% Similarity=0.231 Sum_probs=64.5
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCcccc--CCHH-H-------------HHHHHhcCcEEecCCCceE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIR--AVPE-E-------------VQLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~--~~~~-~-------------~~~~~~~gV~i~~~~~v~~ 210 (842)
.+|+|||||..|+.+|..|.+.|.+ +|+++++.+..... .... . ...+.+.+++++.++.++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 3699999999999999999999864 59999987632211 1111 1 1224467999999999998
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+...... |.+. +| .++.+|.+|+|||.+|
T Consensus 83 id~~~~~---v~~~-------------~g--~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 83 LDVQTRT---ISLD-------------DG--TTLSADAIVIATGSRA 111 (410)
T ss_dssp EETTTTE---EEET-------------TS--CEEECSEEEECCCEEE
T ss_pred EECCCCE---EEEC-------------CC--CEEECCEEEEccCCcc
Confidence 8743322 2222 22 2689999999999884
No 348
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=97.05 E-value=0.0042 Score=69.61 Aligned_cols=126 Identities=15% Similarity=0.100 Sum_probs=98.5
Q ss_pred CCH-hHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHH
Q psy16199 574 YNK-DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITD 648 (842)
Q Consensus 574 ~~~-e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~ 648 (842)
.++ +++.+.++++.++|++.|.+++++ +++...+++++||+.+ ++++.+.....+ .+..+
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~ 247 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD---------------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARR 247 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHH
Confidence 467 889888888888899999998643 4677788999999975 689999886543 47788
Q ss_pred HHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCC-CcEEEecCcCC
Q psy16199 649 IAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-FPILGIGGIDS 727 (842)
Q Consensus 649 ~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~-ipIi~~GGI~t 727 (842)
+++.+++.|++.|-= | +.+..++..+++++.+ + +||++.+.+.+
T Consensus 248 ~~~~L~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~~iPIa~dE~~~~ 292 (428)
T 3bjs_A 248 VLPVLAEIQAGWLEE-----------------P-----------------FACNDFASYREVAKIT-PLVPIAAGENHYT 292 (428)
T ss_dssp HHHHHHHTTCSCEEC-----------------C-----------------SCTTCHHHHHHHTTTC-SSSCEEECTTCCS
T ss_pred HHHHHHhcCCCEEEC-----------------C-----------------CCccCHHHHHHHHHhC-CCCcEEcCCCcCC
Confidence 999999999885521 1 1122377778888887 6 99999999999
Q ss_pred HHHHHHHHHhC-CCEEEEehhhh
Q psy16199 728 ADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 728 ~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
.+++.+++..| +|.|++=-.-.
T Consensus 293 ~~~~~~~i~~~~~d~v~ik~~~~ 315 (428)
T 3bjs_A 293 RFEFGQMLDAGAVQVWQPDLSKC 315 (428)
T ss_dssp HHHHHHHHTTCCEEEECCBTTTS
T ss_pred HHHHHHHHHhCCCCEEEeCcccc
Confidence 99999999876 78887754443
No 349
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.03 E-value=0.0046 Score=64.08 Aligned_cols=117 Identities=22% Similarity=0.189 Sum_probs=74.2
Q ss_pred HHHHhhcCcCEEEEeccCCCCCCCCCCcccCC---CCHHHHHHHHHHHHhhCCccEEEEe---cCChh--c-HHHHHHHH
Q psy16199 583 SKKTEKAGADALELNLSCPHGMGERGMGLACG---QDPEMVRNISLWVRSSVKIPFFVKL---TPNIT--N-ITDIAKAA 653 (842)
Q Consensus 583 a~~~~~agaD~ielN~scP~~~~~~~~G~~~~---~~~~~~~~ii~~v~~~~~~Pv~vKl---~p~~~--~-~~~~a~~~ 653 (842)
++.+.+.|||.|++=++- |.-.. .+.+.+.+-+++|++..+ +..+|+ +..++ + +...++.+
T Consensus 106 a~~Av~~GAdEIDmVini---------g~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia 175 (297)
T 4eiv_A 106 AVGALKDGADEIECLIDW---------RRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAA 175 (297)
T ss_dssp HHHHHHTTCSEEEEECCT---------HHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeeeeH---------HHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHH
Confidence 334444699999974321 22222 456788888888888874 567887 33443 2 45778888
Q ss_pred HHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh-h-------------------
Q psy16199 654 YEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK-M------------------- 713 (842)
Q Consensus 654 ~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~-~------------------- 713 (842)
.++|+|+|--+- |.-.+.+ .+-..+++.+..+ .
T Consensus 176 ~~AGADFVKTST--------------------------Gf~~~gA-T~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~t 228 (297)
T 4eiv_A 176 LEGGADFLQTSS--------------------------GLGATHA-TMFTVHLISIALREYMVRENERIRVEGINREGAA 228 (297)
T ss_dssp HHHTCSEEECCC--------------------------SSSSCCC-CHHHHHHHHHHHHHHHCC----------------
T ss_pred HHhCCCEEEcCC--------------------------CCCCCCC-CHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 999999997632 1111112 2333444433332 1
Q ss_pred CCCCcEEEe-cCcCCHHHHHHHHH
Q psy16199 714 FPNFPILGI-GGIDSADVALQFIQ 736 (842)
Q Consensus 714 ~~~ipIi~~-GGI~t~~da~~~l~ 736 (842)
-+++-|=++ |||+|.+||.+++.
T Consensus 229 g~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 229 VRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp --CCEEEEECTTCCHHHHHHHHHH
T ss_pred CCceeEEecCCCCCCHHHHHHHHH
Confidence 135889999 99999999999999
No 350
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.03 E-value=0.0021 Score=71.64 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=29.3
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+-+|..|++.|.+ |+|+++..
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G~~-V~v~E~~~ 38 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSGFK-VKIVEKQK 38 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEECSSC
T ss_pred cEEEECCCHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 499999999999999999999985 99999864
No 351
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.02 E-value=0.0014 Score=76.77 Aligned_cols=96 Identities=11% Similarity=0.151 Sum_probs=66.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCccccC-------------CHH----HHHH-HHhcCcEEecCCC
Q psy16199 148 GTVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTNIRA-------------VPE----EVQL-AWEEKCEFLPFMS 207 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~~~~-------------~~~----~~~~-~~~~gV~i~~~~~ 207 (842)
.+|+|||||..|+.+|..|.+. |. +|+|+++++...... ... .... ..+.++++++++.
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~~~g~-~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRLSEED-EIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSS-EEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCC-CEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 4599999999999999999998 65 499999886421110 000 1222 3467999999999
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
++.+...+..+ .+.+. .+|+..++.+|.||+|+|.+|
T Consensus 116 V~~id~~~~~v---~v~~~----------~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 116 VVKINKEEKTI---TIKNV----------TTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp EEEEETTTTEE---EEEET----------TTCCEEEEECSEEEECCCEEE
T ss_pred EEEEECCCCEE---EEeec----------CCCCEEEEeCCEEEECCCCCC
Confidence 99987444332 23221 124455789999999999884
No 352
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.01 E-value=0.0014 Score=70.60 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=62.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc--------------cccCC----HHH-H----HHHHhcCcEEecC
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT--------------NIRAV----PEE-V----QLAWEEKCEFLPF 205 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~--------------~~~~~----~~~-~----~~~~~~gV~i~~~ 205 (842)
+|+|||||..|+.+|..|.+.|.+ |+++++.+.. ..+.. ..+ . +.+.+.+++++.+
T Consensus 7 ~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 7 DVLIVGAGPTGLFAGFYVGMRGLS-FRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHhCCCC-EEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 499999999999999999999875 9999987521 00110 111 1 2234568999989
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
+.++.+...++.. .|.+. ++ .++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~~~~~-~v~~~-------------~g--~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGDLF-KVTTS-------------QG--NAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETTEE-EEEET-------------TS--CEEEEEEEEECCTTS
T ss_pred CEEEEEEECCCEE-EEEEC-------------CC--CEEEeCEEEECCCCC
Confidence 8998886433322 23221 12 268899999999984
No 353
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.00 E-value=0.00082 Score=76.02 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=61.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCcc-----ccC-------CHHHH----HHH-HhcCcEEecCCCc
Q psy16199 148 GTVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTN-----IRA-------VPEEV----QLA-WEEKCEFLPFMSP 208 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~-----~~~-------~~~~~----~~~-~~~gV~i~~~~~v 208 (842)
.+|+|||||..|+.+|..|++. |. +|+++++.+... ++. .+... +.+ .+.|++++.++.+
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~-~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEW-DVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCC-CEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 3599999999999999999998 54 599999876321 110 00111 112 4679999999888
Q ss_pred eEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+.. + . ..+.. ++...++.+|.||+|||.+|
T Consensus 83 ~~i~~-~-~-~~v~~--------------~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 83 IEVDT-G-Y-VRVRE--------------NGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp EEECS-S-E-EEEEC--------------SSSEEEEECSEEEECCCEEE
T ss_pred EEEec-C-C-CEEEE--------------CCceEEEEcCEEEECCCCCC
Confidence 88852 2 1 11211 12234789999999999884
No 354
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.99 E-value=0.0016 Score=76.24 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=69.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc-------------------------------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI------------------------------------------- 185 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~------------------------------------------- 185 (842)
+|+|||||.+|+-+|..|++.|.+ |+|+++.+....
T Consensus 25 DVvIVGgG~AGl~aA~~Lar~G~~-V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~~ 103 (591)
T 3i3l_A 25 KVAIIGGGPAGSVAGLTLHKLGHD-VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQA 103 (591)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSCC
T ss_pred CEEEECcCHHHHHHHHHHHcCCCC-EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCCc
Confidence 499999999999999999999975 999998731000
Q ss_pred ----------------c----CCHHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCc
Q psy16199 186 ----------------R----AVPEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQ 240 (842)
Q Consensus 186 ----------------~----~~~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~ 240 (842)
+ ..... .+.+.+.|++++.++.++++...++.+..|++.+ +|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~------------~G~ 171 (591)
T 3i3l_A 104 PWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR------------GGE 171 (591)
T ss_dssp CEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE------------TTE
T ss_pred cceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec------------CCc
Confidence 0 00011 1234457999999999999875456666677653 244
Q ss_pred eEEEECCEEEEccccC
Q psy16199 241 RIKLKANYIISAFGST 256 (842)
Q Consensus 241 ~~~i~~D~Vi~a~G~~ 256 (842)
..++.||.||.|+|..
T Consensus 172 ~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSG 187 (591)
T ss_dssp EEEEEESEEEECCGGG
T ss_pred eEEEEcCEEEECCCCc
Confidence 4689999999999976
No 355
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.99 E-value=0.0012 Score=72.00 Aligned_cols=92 Identities=10% Similarity=0.032 Sum_probs=62.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc--------------cccCC----HHHH-----HHHHhcCcEEecC
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT--------------NIRAV----PEEV-----QLAWEEKCEFLPF 205 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~--------------~~~~~----~~~~-----~~~~~~gV~i~~~ 205 (842)
+|+|||||+.|+.+|..|.+.|.+ |+|+++.+.. ..+.. ..++ +.+.+.+++++.+
T Consensus 16 dvvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 16 DLTIIGGGPTGIFAAFQCGMNNIS-CRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCC-EEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 499999999999999999999975 9999986421 00111 1221 2334568999999
Q ss_pred CCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 206 MSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 206 ~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
+.++.+...+.....|.+. +| .++.+|.||+|+|..
T Consensus 95 ~~v~~i~~~~~~~~~v~~~-------------~g--~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 95 ETVTKYTKLDDGTFETRTN-------------TG--NVYRSRAVLIAAGLG 130 (360)
T ss_dssp CCEEEEEECTTSCEEEEET-------------TS--CEEEEEEEEECCTTC
T ss_pred CEEEEEEECCCceEEEEEC-------------CC--cEEEeeEEEEccCCC
Confidence 8998887433212223322 12 268999999999984
No 356
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.98 E-value=0.0068 Score=66.11 Aligned_cols=128 Identities=19% Similarity=0.181 Sum_probs=91.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|++.+=|.+.+..+++. ..+.+.|...|.- . .+++.+.+.++.+++..++|+.+-+..+-
T Consensus 46 ~Pii~apM~~vt~~~lA~--avA~~GGlgii~~-----------~------~s~e~~~~~I~~vk~~~~~pvga~ig~~~ 106 (361)
T 3khj_A 46 IPLISSAMDTVTEHLMAV--GMARLGGIGIIHK-----------N------MDMESQVNEVLKVKNSGGLRVGAAIGVNE 106 (361)
T ss_dssp SSEEECSSTTTCSHHHHH--HHHHTTCEEEECS-----------S------SCHHHHHHHHHHHHHTTCCCCEEEECTTC
T ss_pred CCEEeecCCCCCcHHHHH--HHHHcCCCeEEec-----------C------CCHHHHHHHHHHHHhccCceEEEEeCCCH
Confidence 688877776554443332 2333334555531 1 46788889999999888899999886542
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+.++.+.++|+|.|++ |+.. | . ....++.++++++.+ ++||++ |
T Consensus 107 ---~e~a~~l~eaGad~I~l-d~a~-----------------------G-~-----~~~~~~~i~~i~~~~-~~~Viv-g 151 (361)
T 3khj_A 107 ---IERAKLLVEAGVDVIVL-DSAH-----------------------G-H-----SLNIIRTLKEIKSKM-NIDVIV-G 151 (361)
T ss_dssp ---HHHHHHHHHTTCSEEEE-CCSC-----------------------C-S-----BHHHHHHHHHHHHHC-CCEEEE-E
T ss_pred ---HHHHHHHHHcCcCeEEE-eCCC-----------------------C-C-----cHHHHHHHHHHHHhc-CCcEEE-c
Confidence 77889999999998876 3210 1 1 122367788888888 789887 6
Q ss_pred CcCCHHHHHHHHHhCCCEEEEe
Q psy16199 724 GIDSADVALQFIQAGAHAVQIC 745 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ 745 (842)
++.|.+++.+++++|||.|-++
T Consensus 152 ~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 152 NVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp EECSHHHHHHHHHTTCSEEEEC
T ss_pred cCCCHHHHHHHHHcCcCEEEEe
Confidence 7899999999999999999984
No 357
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.98 E-value=0.0012 Score=72.03 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=61.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC---------------cc-----cc---------------------C
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC---------------TN-----IR---------------------A 187 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~---------------~~-----~~---------------------~ 187 (842)
+|+|||||..|+.+|..|.+.|..+|+|+++++. .. +. .
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 85 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHI 85 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSSC
T ss_pred cEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccCC
Confidence 4999999999999999999998724999998740 00 00 0
Q ss_pred CHHHH-----HHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 188 VPEEV-----QLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 188 ~~~~~-----~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
...++ ..+.+.|++++.++.++++...++... |... ++ ++.+|.||+|+|..
T Consensus 86 ~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~-------------~g---~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 86 SGETYAEYLQVVANHYELNIFENTVVTNISADDAYYT-IATT-------------TE---TYHADYIFVATGDY 142 (369)
T ss_dssp BHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE-EEES-------------SC---CEEEEEEEECCCST
T ss_pred CHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEE-EEeC-------------CC---EEEeCEEEECCCCC
Confidence 01111 123456999999999988874333221 3221 12 47899999999986
No 358
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.98 E-value=0.0023 Score=70.92 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=30.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC 182 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~ 182 (842)
.+|+|||||.+|+.+|..|++.|.+ |+|+++.+.
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~-v~v~E~~~~ 39 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVD-VDVYERSPQ 39 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC-EEEEecCCC
Confidence 3599999999999999999999975 999998753
No 359
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.97 E-value=0.0014 Score=73.36 Aligned_cols=91 Identities=20% Similarity=0.208 Sum_probs=64.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCccccC------------CHH-----HHHHHHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIRA------------VPE-----EVQLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~~------------~~~-----~~~~~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||..|+.+|..|++.|.+ +|+++++.+...... ... ....+.+.+++++.++.++.
T Consensus 11 ~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 90 (415)
T 3lxd_A 11 DVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVS 90 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEEE
T ss_pred cEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEEE
Confidence 499999999999999999999863 499999876321100 000 12334577999999999999
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+...... |.+. ++ .++.+|.+|+|+|.+|
T Consensus 91 id~~~~~---v~~~-------------~g--~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 91 LDPAAHT---VKLG-------------DG--SAIEYGKLIWATGGDP 119 (415)
T ss_dssp EETTTTE---EEET-------------TS--CEEEEEEEEECCCEEC
T ss_pred EECCCCE---EEEC-------------CC--CEEEeeEEEEccCCcc
Confidence 8743322 2222 12 2688999999999884
No 360
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=96.96 E-value=0.0076 Score=67.35 Aligned_cols=160 Identities=8% Similarity=-0.053 Sum_probs=111.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCC-----CCC--CCcccCC--CCHHHHHHHHHHHHhhC--C
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGM-----GER--GMGLACG--QDPEMVRNISLWVRSSV--K 632 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~-----~~~--~~G~~~~--~~~~~~~~ii~~v~~~~--~ 632 (842)
.|+.+++. +.+++++.+.++.+.+.|+.+|-+.++++... ... .-|..+. .+.+...+++++||+.+ +
T Consensus 144 v~~y~~~~-~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 144 IPAYSHAS-GETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEEeC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 45666554 46899999988888778999999999864210 000 0111110 11456778899999986 6
Q ss_pred ccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHH
Q psy16199 633 IPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSI 710 (842)
Q Consensus 633 ~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i 710 (842)
++|.+.....++ +..++++.+++.|++.|-= | +.|-.++..+++
T Consensus 223 ~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l 268 (422)
T 3tji_A 223 LHILHDVHERLFPQQAVQLAKQLEPFQPYFIED-----------------I-----------------LPPQQSAWLEQV 268 (422)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC-----------------C-----------------SCGGGGGGHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCeEEC-----------------C-----------------CChhhHHHHHHH
Confidence 899999876544 7788999999998876631 1 112224556778
Q ss_pred HhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 711 AKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 711 ~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
++.+ ++||++.+.+.+.+|+.+++..| +|.||+--.-. .|..-..++.
T Consensus 269 ~~~~-~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~-GGit~~~kia 317 (422)
T 3tji_A 269 RQQS-CVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQI-GGITPALKLA 317 (422)
T ss_dssp HHHC-CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGG-TSHHHHHHHH
T ss_pred HhhC-CCCEEEeCCcCCHHHHHHHHhcCCCCEEecCcccc-CCHHHHHHHH
Confidence 8887 69999999999999999999976 89999876665 3444444443
No 361
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.94 E-value=0.0014 Score=74.64 Aligned_cols=96 Identities=20% Similarity=0.183 Sum_probs=59.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCcc-----ccCC-------HHH-----------HHHHH-hcCcE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTN-----IRAV-------PEE-----------VQLAW-EEKCE 201 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~-----~~~~-------~~~-----------~~~~~-~~gV~ 201 (842)
.+|+|||||..|+.+|..|++. |. +|+|+++++... ++.. ... .+.+. ..+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~-~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEA-HVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTS-EEEEECCC-------------------------------------------CE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCC-CEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 3599999999999999999998 75 499999886421 1100 001 11122 36889
Q ss_pred EecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 202 FLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 202 i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
++.++.++.+......+ .+.+. .+|+..++.+|.+|+|+|.+|
T Consensus 83 ~~~~~~V~~id~~~~~v---~~~~~----------~~g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTV---EIENL----------RTGERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp EECSEEEEEEETTTTEE---EEEET----------TTCCEEEEECSEEEECCCEEE
T ss_pred EEECCEEEEEECCCCEE---EEeec----------CCCCEEEEECCEEEEeCCCCc
Confidence 88888888887433332 23221 124445799999999999874
No 362
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.92 E-value=0.021 Score=71.29 Aligned_cols=186 Identities=10% Similarity=0.052 Sum_probs=106.5
Q ss_pred cccccCCcccccCC-CCCCCCCChhHHHHhhhhh-hCc-cccccccCccC-CCcc-eeEeeccCCccccCCccccCCCcc
Q psy16199 462 LKKLNSDGVSLQNG-LPKRQINTPVETILSVKDV-IGQ-AVQRVTNYTEL-DNKK-QVVALINDDMCINCGKCYMACNDS 536 (842)
Q Consensus 462 ~~~~~~~~~g~~~g-~dk~~~~~~~~~~~~l~~~-~G~-~~g~vt~~~~~-~n~~-~~~~~~~~~~~in~~~c~~Gfn~~ 536 (842)
++..+.|||+++++ ++.+ .+.+...... +|| .+|+++..+.. +|++ |++|++..-.. +|.
T Consensus 538 ~G~~~~nPv~lAa~~~~~~-----~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~-------~~~--- 602 (1025)
T 1gte_A 538 AGLKFINPFGLASAAPTTS-----SSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPM-------YGP--- 602 (1025)
T ss_dssp TTEEESSSEEECSSGGGSS-----HHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSC-------CSS---
T ss_pred ccccccCcccccCCCCCCC-----HHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccc-------cCC---
Confidence 36789999999887 6777 5666655544 455 77999987654 9998 88886644110 110
Q ss_pred chhhhhcCccccccccccccccccccccceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCC
Q psy16199 537 GYQAITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQD 616 (842)
Q Consensus 537 G~dai~~~~~~~~~~~~~~~~~~~~~~~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~ 616 (842)
+.+++. |. +.... ..
T Consensus 603 -----------------------------------------------------~~~~~~-n~-----e~~~~------~~ 617 (1025)
T 1gte_A 603 -----------------------------------------------------GQSSFL-NI-----ELISE------KT 617 (1025)
T ss_dssp -----------------------------------------------------CCSCEE-EC-----CCSCS------SC
T ss_pred -----------------------------------------------------chhhee-ee-----ccccc------hh
Confidence 000000 00 00000 11
Q ss_pred HHHHHHHHHHHHhhC-CccEEEEe--cCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCC
Q psy16199 617 PEMVRNISLWVRSSV-KIPFFVKL--TPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693 (842)
Q Consensus 617 ~~~~~~ii~~v~~~~-~~Pv~vKl--~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG 693 (842)
.+.+.+-++.+++.. +.|+++=+ ..+.+++.+.++.+++.|+|+|.+.=. . |.. .....+|+
T Consensus 618 ~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~--~-----------P~~--~~~~~~G~ 682 (1025)
T 1gte_A 618 AAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLS--C-----------PHG--MGERGMGL 682 (1025)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC--C-----------BCC--CC-----S
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECC--C-----------CCC--CCCCCccc
Confidence 222233334444433 46777766 334567888899999999999998321 1 100 01112232
Q ss_pred CCCCccccchHHHHHHHHhhCCCCcEEE--ecCcCCHHHHHHHH-HhCCCEEEE
Q psy16199 694 VSGNATRPMGLKAVSSIAKMFPNFPILG--IGGIDSADVALQFI-QAGAHAVQI 744 (842)
Q Consensus 694 ~sG~~~~p~al~~v~~i~~~~~~ipIi~--~GGI~t~~da~~~l-~~GA~~Vqv 744 (842)
.-+. ......+.++.+++.+ ++||+. ..++.+..++.+.+ ++|+++|.+
T Consensus 683 ~~~~-~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 683 ACGQ-DPELVRNICRWVRQAV-QIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp BGGG-CHHHHHHHHHHHHHHC-SSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred cccc-CHHHHHHHHHHHHHhh-CCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 1111 1345678888898887 688884 55666666655554 599999998
No 363
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.92 E-value=0.0013 Score=72.35 Aligned_cols=89 Identities=13% Similarity=0.172 Sum_probs=62.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc--cCCH---------H-----HHHHHHhcCcEEecCCCceEE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI--RAVP---------E-----EVQLAWEEKCEFLPFMSPVQV 211 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~--~~~~---------~-----~~~~~~~~gV~i~~~~~v~~v 211 (842)
.+|+|||||+.|+.+|..|++.| +|+|+++.+.... +... + ....+.+.|++++.++.++.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g--~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY--EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS--EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CcEEEECCcHHHHHHHHHHhhcC--CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 44999999999999999999988 6999998763111 0000 0 112345679999999888888
Q ss_pred EccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 212 ~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
... .+. |. .+ + .++.+|.+|+|||.+|
T Consensus 87 d~~-~~~--V~-~~-------------g--~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 87 DRG-RKV--VI-TE-------------K--GEVPYDTLVLATGARA 113 (367)
T ss_dssp ETT-TTE--EE-ES-------------S--CEEECSEEEECCCEEE
T ss_pred ECC-CCE--EE-EC-------------C--cEEECCEEEECCCCCC
Confidence 632 221 22 21 2 2689999999999984
No 364
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=96.92 E-value=0.0083 Score=67.55 Aligned_cols=126 Identities=18% Similarity=0.210 Sum_probs=97.0
Q ss_pred CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh--hcHHH
Q psy16199 573 TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI--TNITD 648 (842)
Q Consensus 573 g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~--~~~~~ 648 (842)
+.+++++.+.++++.++|++.|.|++++ +++...+.+++||+.+ ++++.+.....+ .+..+
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~ 260 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA---------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAID 260 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHH
Confidence 3578999999998888899999998642 4677788999999876 689998876544 46778
Q ss_pred HHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCH
Q psy16199 649 IAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSA 728 (842)
Q Consensus 649 ~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~ 728 (842)
+++.+++.|++.|-- | +.+..+...+++++.+..+||++.+.+.+.
T Consensus 261 ~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~ 306 (441)
T 2hxt_A 261 WMRQLAEFDIAWIEE-----------------P-----------------TSPDDVLGHAAIRQGITPVPVSTGEHTQNR 306 (441)
T ss_dssp HHHTTGGGCCSCEEC-----------------C-----------------SCTTCHHHHHHHHHHHTTSCEEECTTCCSH
T ss_pred HHHHHHhcCCCeeeC-----------------C-----------------CCHHHHHHHHHHHhhCCCCCEEEeCCcCCH
Confidence 888888888775421 1 112236677788887634999999999999
Q ss_pred HHHHHHHHhC-CCEEEEehh
Q psy16199 729 DVALQFIQAG-AHAVQICSA 747 (842)
Q Consensus 729 ~da~~~l~~G-A~~Vqv~ta 747 (842)
+++.+++..| +|.||+--.
T Consensus 307 ~~~~~~i~~~~~d~v~ik~~ 326 (441)
T 2hxt_A 307 VVFKQLLQAGAVDLIQIDAA 326 (441)
T ss_dssp HHHHHHHHHTCCSEECCCTT
T ss_pred HHHHHHHHcCCCCEEEeCcc
Confidence 9999999976 799987543
No 365
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.90 E-value=0.0014 Score=73.74 Aligned_cols=90 Identities=19% Similarity=0.252 Sum_probs=59.4
Q ss_pred CcEEEEcCChhHHHHHHHHHH--cCCcEEEEEEeecCccccCC-HHH--------------HHHHHhcCcEEecCCCceE
Q psy16199 148 GTVIVLGAGDTAFDCATSALR--CGANKVLVVFRKGCTNIRAV-PEE--------------VQLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~--~G~~~Vtlv~r~~~~~~~~~-~~~--------------~~~~~~~gV~i~~~~~v~~ 210 (842)
.+|+|||||..|+.+|..|.+ .|. +|||+++++....... ... ...+.+.|++++.. .++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~-~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDL-KITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTC-EEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCC-eEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEE
Confidence 459999999999999999999 565 5999998763221111 110 01233468888764 7777
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+..++.. |.+. ++ .++.+|.+|+|+|.+|
T Consensus 81 id~~~~~---v~~~-------------~g--~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 81 IDPDANT---VTTQ-------------SG--KKIEYDYLVIATGPKL 109 (430)
T ss_dssp EETTTTE---EEET-------------TC--CEEECSEEEECCCCEE
T ss_pred EECCCCE---EEEC-------------CC--cEEECCEEEEcCCccc
Confidence 7633221 2222 12 2689999999999984
No 366
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.88 E-value=0.002 Score=69.98 Aligned_cols=32 Identities=31% Similarity=0.358 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.+
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G~~-V~vlE~~~ 37 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGGHE-VLVAEAAE 37 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCe-EEEEeCCC
Confidence 399999999999999999999985 99999874
No 367
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.87 E-value=0.0028 Score=69.52 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+.+|..|++.|.+ |+|+++..
T Consensus 7 dVvIIGgGi~Gl~~A~~La~~G~~-V~lle~~~ 38 (382)
T 1y56_B 7 EIVVIGGGIVGVTIAHELAKRGEE-VTVIEKRF 38 (382)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCC
Confidence 499999999999999999999976 99999763
No 368
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=96.86 E-value=0.011 Score=64.62 Aligned_cols=145 Identities=10% Similarity=-0.001 Sum_probs=108.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-+++. ..+++++.+.++.+.+.|+..+-+++++ +++.-.+.+++||+.+ ++++.+....
T Consensus 130 v~~~~~~~-~~~~~~~~~~a~~~~~~G~~~~K~K~G~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 193 (356)
T 3ro6_B 130 LPTSVTIG-IKPVEETLAEAREHLALGFRVLKVKLCG---------------DEEQDFERLRRLHETLAGRAVVRVDPNQ 193 (356)
T ss_dssp EEBCEEEC-SCCHHHHHHHHHHHHHTTCCEEEEECCS---------------CHHHHHHHHHHHHHHHTTSSEEEEECTT
T ss_pred eeeeEEEc-CCCHHHHHHHHHHHHHcCCCEEEEEeCC---------------CHHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34455554 3578888888888777899999999754 4566678889999885 6899999866
Q ss_pred Chh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.++ +..++++.+++.|++.|-= | +.|-.++..+++++.. ++||
T Consensus 194 ~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iPI 238 (356)
T 3ro6_B 194 SYDRDGLLRLDRLVQELGIEFIEQ-----------------P-----------------FPAGRTDWLRALPKAI-RRRI 238 (356)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCEEC-----------------C-----------------SCTTCHHHHHTSCHHH-HHTE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCCCcHHHHHHHHhcC-CCCE
Confidence 554 6778999999998877631 1 1122366677777776 6999
Q ss_pred EEecCcCCHHHHHHHHHhC--CCEEEEehhhhccCchhHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG--AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G--A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
++..-+.+.+|+.+++..| ++.||+--.-. .|..-..++.
T Consensus 239 a~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i~ 280 (356)
T 3ro6_B 239 AADESLLGPADAFALAAPPAACGIFNIKLMKC-GGLAPARRIA 280 (356)
T ss_dssp EESTTCCSHHHHHHHHSSSCSCSEEEECHHHH-CSHHHHHHHH
T ss_pred EeCCcCCCHHHHHHHHhcCCcCCEEEEccccc-CCHHHHHHHH
Confidence 9999999999999999965 99999987766 4554444443
No 369
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.85 E-value=0.021 Score=57.77 Aligned_cols=130 Identities=18% Similarity=0.147 Sum_probs=88.1
Q ss_pred ceEEEecc-CC----CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEe
Q psy16199 565 ILIASIMC-TY----NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKL 639 (842)
Q Consensus 565 pvi~si~~-g~----~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl 639 (842)
-+|+|.-+ +. +.+...++++.++++|+++|.++ .+ +.++.+++.+++|++..+
T Consensus 6 ~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~------------------~~----~~i~~i~~~~~~pv~~~~ 63 (223)
T 1y0e_A 6 GLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN------------------TK----EDILAIKETVDLPVIGIV 63 (223)
T ss_dssp EEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE------------------SH----HHHHHHHHHCCSCEEEEC
T ss_pred CeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC------------------CH----HHHHHHHHhcCCCEEeee
Confidence 45666543 11 45788999999999999999874 12 557888888899995322
Q ss_pred cCC-------hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh
Q psy16199 640 TPN-------ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK 712 (842)
Q Consensus 640 ~p~-------~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~ 712 (842)
..+ ++...+.++.+.++|+|.|+++-.... .| . ....++++.+++
T Consensus 64 ~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~----------~p----------------~--~~~~~~i~~~~~ 115 (223)
T 1y0e_A 64 KRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQ----------RP----------------K--ETLDELVSYIRT 115 (223)
T ss_dssp BCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC----------CS----------------S--SCHHHHHHHHHH
T ss_pred ccCCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc----------Cc----------------c--cCHHHHHHHHHH
Confidence 111 112234567788899999988432100 00 0 122577888888
Q ss_pred hCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEeh
Q psy16199 713 MFPNFPILGIGGIDSADVALQFIQAGAHAVQICS 746 (842)
Q Consensus 713 ~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~t 746 (842)
.+++++++. ++.+.+++.++..+|++.|+++.
T Consensus 116 ~~~~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 116 HAPNVEIMA--DIATVEEAKNAARLGFDYIGTTL 147 (223)
T ss_dssp HCTTSEEEE--ECSSHHHHHHHHHTTCSEEECTT
T ss_pred hCCCceEEe--cCCCHHHHHHHHHcCCCEEEeCC
Confidence 876666654 67899999999999999998754
No 370
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.85 E-value=0.0095 Score=64.95 Aligned_cols=131 Identities=18% Similarity=0.197 Sum_probs=88.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.|||..=|.+.+..+++. ..+..-|.-.|+.| .+++.+.+.++.+++...+++.+-+..+
T Consensus 47 ~Pii~apM~~vs~~~lA~--avA~aGGlg~i~~~-----------------~s~e~~~~~i~~vk~~~~l~vga~vg~~- 106 (366)
T 4fo4_A 47 IPMVSASMDTVTEARLAI--ALAQEGGIGFIHKN-----------------MSIEQQAAQVHQVKISGGLRVGAAVGAA- 106 (366)
T ss_dssp SSEEECCCTTTCSHHHHH--HHHHTTCEEEECSS-----------------SCHHHHHHHHHHHHTTTSCCCEEECCSC-
T ss_pred CCEEeCCCCCCChHHHHH--HHHHcCCceEeecC-----------------CCHHHHHHHHHHHHhcCceeEEEEeccC-
Confidence 688877775544333322 22333244444321 4678888999999986555555544322
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.+..+.++.+.++|+|.|++ |+.. |. .+..++.++++++.++++||++ |
T Consensus 107 ~~~~~~~~~lieaGvd~I~i-dta~------------------------G~-----~~~~~~~I~~ik~~~p~v~Vi~-G 155 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLI-DSSH------------------------GH-----SEGVLQRIRETRAAYPHLEIIG-G 155 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEE-ECSC------------------------TT-----SHHHHHHHHHHHHHCTTCEEEE-E
T ss_pred hhHHHHHHHHHhCCCCEEEE-eCCC------------------------CC-----CHHHHHHHHHHHHhcCCCceEe-e
Confidence 24567789999999998876 2211 11 1234678889999887788776 6
Q ss_pred CcCCHHHHHHHHHhCCCEEEEe
Q psy16199 724 GIDSADVALQFIQAGAHAVQIC 745 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ 745 (842)
.+.|.+++.++.++|||+|-++
T Consensus 156 ~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 156 NVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp EECSHHHHHHHHHHTCSEEEEC
T ss_pred eeCCHHHHHHHHHcCCCEEEEe
Confidence 7899999999999999999983
No 371
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.85 E-value=0.01 Score=63.08 Aligned_cols=128 Identities=19% Similarity=0.179 Sum_probs=76.3
Q ss_pred HHHHHhhcCcCEEEEeccC-CCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC---Ch-------hcHHHHH
Q psy16199 582 LSKKTEKAGADALELNLSC-PHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP---NI-------TNITDIA 650 (842)
Q Consensus 582 ~a~~~~~agaD~ielN~sc-P~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p---~~-------~~~~~~a 650 (842)
-++.+.+.|||++.+.+.. +.... .+..+.+.++.+..+ ..++|+++=+-+ .+ ..+.+.+
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d~~~--------~~~~~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa 183 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSDEDA--------QQRLNMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIIDAA 183 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCH--------HHHHHHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHHHH
T ss_pred hHHHHHHcCCCEEEEEEEcCCCccH--------HHHHHHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHHHH
Confidence 3455566799999964421 21100 011223333333332 358999987742 22 1245568
Q ss_pred HHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh----CCCCc-EEEecCc
Q psy16199 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM----FPNFP-ILGIGGI 725 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~----~~~ip-Ii~~GGI 725 (842)
+.+.+.|+|.|-+.-++. ..| .++.+.++.+. + .+| |+.+||+
T Consensus 184 ~~a~~lGaD~iKv~~~~~---------------------~~g----------~~~~~~~vv~~~~~~~-~~P~Vv~aGG~ 231 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLY---------------------GKG----------ARSDLLTASQRLNGHI-NMPWVILSSGV 231 (304)
T ss_dssp HHHTTSSCSEEEECCGGG---------------------GCS----------CHHHHHHHHHHHHHTC-CSCEEECCTTS
T ss_pred HHHHHcCCCEEEeCCCcC---------------------CCC----------CHHHHHHHHHhccccC-CCCeEEEecCC
Confidence 888999999888721100 011 13333343333 5 699 9999999
Q ss_pred CCHH----HHHHHHHhCCCEEEEehhhhcc
Q psy16199 726 DSAD----VALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 726 ~t~~----da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+.+ .+.+++.+||++|-+||++.+.
T Consensus 232 -~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 232 -DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp -CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred -CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 553 4777788999999999999955
No 372
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.84 E-value=0.0055 Score=66.26 Aligned_cols=172 Identities=16% Similarity=0.127 Sum_probs=101.4
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCcc---------------------------cc----------CCH
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTN---------------------------IR----------AVP 189 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~---------------------------~~----------~~~ 189 (842)
.|+|||||..|+.+|..|++. |.+ |+|+++..... .+ ...
T Consensus 81 DVvIVGgG~AGL~aA~~La~~~~G~~-V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 81 DIVIVGAGSCGLSAAYVLSTLRPDLR-ITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSC-EEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCE-EEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 399999999999999999997 875 99999875211 00 000
Q ss_pred H-----HHHHHHh-cCcEEecCCCceEEEccC-----------------C--cEEEEEEEeecccCCCCeeccCCceEEE
Q psy16199 190 E-----EVQLAWE-EKCEFLPFMSPVQVDVKD-----------------N--KIAGMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 190 ~-----~~~~~~~-~gV~i~~~~~v~~v~~~~-----------------~--~v~~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
. ..+.+.+ .|++++.++.++++..++ + ++.+|.........+|... ...+..++
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~-~~~d~~~i 238 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQ-SAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSS-SCCBCEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcc-cccCceEE
Confidence 0 1223344 499999999888886433 2 6777766543222222100 01234689
Q ss_pred ECCEEEEccccCcCC-hhHHhhcC--CcccCCCCC----------eeeCCCCCCCCCCCeEEeccCCC----Cc---hhH
Q psy16199 245 KANYIISAFGSTLLD-NDVLEAIK--PVKLDKYGY----------PEVNYTTMATSVPGVFCGGDTAN----LS---DTT 304 (842)
Q Consensus 245 ~~D~Vi~a~G~~~~~-~~l~~~l~--gl~~~~~G~----------i~vd~~~~~Ts~~gVfa~GD~~~----~~---~~~ 304 (842)
.++.||.|+|...+- ..+.+.+. |+.-.-.|. ..|+ .+.+ -+||+|++|=.+. .+ ...
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~-~t~~-v~~gl~~~gm~~~~~~g~~rmgp~f 316 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVN-NTRE-IVPGLIVGGMELSEIDGANRMGPTF 316 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHH-TCEE-EETTEEECGGGHHHHHTCEECCSCC
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcc-cCce-EcCCEEEechhhHhhcCCCCCCccc
Confidence 999999999977332 12222221 221000111 1122 2222 3799999996532 11 122
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy16199 305 VESVNDGKTAAWHIHKYIQE 324 (842)
Q Consensus 305 ~~A~~~G~~aA~~I~~~L~~ 324 (842)
-.=+..|++||..|.+.|..
T Consensus 317 g~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 317 GAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeecCHHHHHHHHHHHHh
Confidence 23457899999999888754
No 373
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.84 E-value=0.0034 Score=71.07 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=64.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcC-----CcEEEEEEeecCcc-----------c-------------cC------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCG-----ANKVLVVFRKGCTN-----------I-------------RA------------ 187 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G-----~~~Vtlv~r~~~~~-----------~-------------~~------------ 187 (842)
.|+|||||+.|+.+|..|.+.| .+ |+++++.+... + +.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~-v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~ 110 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALE-VLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKH 110 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCC-EEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCccc-EEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhc
Confidence 3999999999999999999998 65 99999876210 0 00
Q ss_pred --------------CHHHH-H---H-HHhcCcEEecCCCceEEEcc--CCcEE--EEEEEeecccCCCCeeccCCceEEE
Q psy16199 188 --------------VPEEV-Q---L-AWEEKCEFLPFMSPVQVDVK--DNKIA--GMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 188 --------------~~~~~-~---~-~~~~gV~i~~~~~v~~v~~~--~~~v~--~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
...++ . . +.+.++.+++++.++.+... +++.. .|...++ +|+..++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g-----------~g~~~~~ 179 (463)
T 3s5w_A 111 DRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA-----------DGEELVR 179 (463)
T ss_dssp TCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET-----------TSCEEEE
T ss_pred CceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC-----------CCceEEE
Confidence 01111 1 1 22347889999888888632 14443 2333332 2444579
Q ss_pred ECCEEEEccccCc
Q psy16199 245 KANYIISAFGSTL 257 (842)
Q Consensus 245 ~~D~Vi~a~G~~~ 257 (842)
.+|.||+|+|..|
T Consensus 180 ~~d~lVlAtG~~p 192 (463)
T 3s5w_A 180 TTRALVVSPGGTP 192 (463)
T ss_dssp EESEEEECCCCEE
T ss_pred EeCEEEECCCCCC
Confidence 9999999999874
No 374
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.83 E-value=0.0035 Score=71.22 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=64.5
Q ss_pred cEEEEcCChhHHHHHHHHHH---cCCc--EEEEEEeecCcc------------------------------------ccC
Q psy16199 149 TVIVLGAGDTAFDCATSALR---CGAN--KVLVVFRKGCTN------------------------------------IRA 187 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~---~G~~--~Vtlv~r~~~~~------------------------------------~~~ 187 (842)
+|+|||||..|+.+|..|++ .|.+ +|+++++.+... ++.
T Consensus 4 ~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~~ 83 (464)
T 2xve_A 4 RIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFAD 83 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBTT
T ss_pred cEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccCC
Confidence 59999999999999999999 8864 299999874210 000
Q ss_pred ---------------CHHHH-H----HHHhcCcE--EecCCCceEEEccCC-cEEEEEEEeecccCCCCeeccCCceEEE
Q psy16199 188 ---------------VPEEV-Q----LAWEEKCE--FLPFMSPVQVDVKDN-KIAGMQFNRTEQNEKGEWVEDEEQRIKL 244 (842)
Q Consensus 188 ---------------~~~~~-~----~~~~~gV~--i~~~~~v~~v~~~~~-~v~~V~~~~~~~~~~G~~~~~~g~~~~i 244 (842)
...++ + .+.+.|++ +++++.|+.+...++ ....|++.+.. +|+..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~----------~g~~~~~ 153 (464)
T 2xve_A 84 YTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHT----------TDTIYSE 153 (464)
T ss_dssp BCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETT----------TTEEEEE
T ss_pred CCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcC----------CCceEEE
Confidence 00111 1 23345887 888888988864332 13345554321 2344578
Q ss_pred ECCEEEEccc--cC
Q psy16199 245 KANYIISAFG--ST 256 (842)
Q Consensus 245 ~~D~Vi~a~G--~~ 256 (842)
.+|.||+|+| ..
T Consensus 154 ~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 154 EFDYVVCCTGHFST 167 (464)
T ss_dssp EESEEEECCCSSSS
T ss_pred EcCEEEECCCCCCC
Confidence 9999999999 56
No 375
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.83 E-value=0.00086 Score=65.78 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=45.1
Q ss_pred HHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCc
Q psy16199 704 LKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDF 753 (842)
Q Consensus 704 l~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp 753 (842)
-+.++++++.+ ++|||+.|+|+|.+|+.+++.+||++|..++..+++|.
T Consensus 139 p~iI~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~~ 187 (192)
T 3kts_A 139 PEQVQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH 187 (192)
T ss_dssp HHHHHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTTC
T ss_pred HHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCcc
Confidence 36888999988 79999999999999999999999999999999998774
No 376
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.83 E-value=0.0031 Score=67.57 Aligned_cols=92 Identities=16% Similarity=0.071 Sum_probs=60.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC----------ccccC-----CHHH-----HHHHHhcCcEEecCCCc
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC----------TNIRA-----VPEE-----VQLAWEEKCEFLPFMSP 208 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~----------~~~~~-----~~~~-----~~~~~~~gV~i~~~~~v 208 (842)
+|+|||||+.|+.+|..|.+.|.+ |+++++... ...+. ...+ .+.+.+.|++++. ..+
T Consensus 10 dvvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 10 DVVIIGGGPAGLTAAIYTGRAQLS-TLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CEEEECCCHHHHHHHHHHHHcCCc-EEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 499999999999999999999975 999998721 00111 1112 1234456899886 577
Q ss_pred eEEEcc--CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVK--DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~--~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+... +.....|.+. +| .++.+|.||+|+|..|
T Consensus 88 ~~i~~~~~~~~~~~v~~~-------------~g--~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRG-------------YN--GEYRAKAVILATGADP 123 (325)
T ss_dssp EEEEECTTSSSCCEEEEE-------------SS--CEEEEEEEEECCCEEE
T ss_pred EEEEeccCCCceEEEEEC-------------CC--CEEEeCEEEECcCCCc
Confidence 777533 2210113222 12 2689999999999873
No 377
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.81 E-value=0.004 Score=66.92 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+.+|..|++.|.+ |+|+++.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G~~-V~vlE~~~ 35 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-VHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCc-EEEEECCC
Confidence 499999999999999999999985 99999874
No 378
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=96.81 E-value=0.011 Score=66.09 Aligned_cols=148 Identities=12% Similarity=0.074 Sum_probs=107.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCccc-------------CC-------CCHHHHHHH
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLA-------------CG-------QDPEMVRNI 623 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~-------------~~-------~~~~~~~~i 623 (842)
.|+.+++. +.+++++.+.++.+.+.|+.++-+.++.|.... .+|.. -+ ++.+...++
T Consensus 139 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~--~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 215 (424)
T 3v3w_A 139 ILSYTHAN-GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAK--TYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDV 215 (424)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC--CTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeccCccccc--cccccccccccccccccccccccccchhHHHHHHHH
Confidence 45655554 468999999988888889999999998753111 01100 00 114567788
Q ss_pred HHHHHhhC--CccEEEEecCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcc
Q psy16199 624 SLWVRSSV--KIPFFVKLTPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT 699 (842)
Q Consensus 624 i~~v~~~~--~~Pv~vKl~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~ 699 (842)
+++||+.+ ++||.+.....+ .+..++++.+++.|++.|-- |.
T Consensus 216 v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq-----------------P~----------------- 261 (424)
T 3v3w_A 216 FAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMED-----------------AV----------------- 261 (424)
T ss_dssp HHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC-----------------CS-----------------
T ss_pred HHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC-----------------CC-----------------
Confidence 99999986 689999987644 47788999999999887731 10
Q ss_pred ccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 700 RPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 700 ~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
.+..++..+++++.+ ++||++.+.+.+.+++.+++..| ++.||+--.-.
T Consensus 262 ~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~ 311 (424)
T 3v3w_A 262 PAENQESFKLIRQHT-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHA 311 (424)
T ss_dssp CCSSTTHHHHHHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred ChHhHHHHHHHHhhC-CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhc
Confidence 111245567788887 69999999999999999999976 89998766555
No 379
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=96.80 E-value=0.029 Score=61.54 Aligned_cols=147 Identities=8% Similarity=0.021 Sum_probs=105.9
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-.++..+...+...++.+.+++.|+..+-+.+++. +++.-.+.+++||+.+ ++++.+....
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~--------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 197 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR--------------SPQDDLIHMEALSNSLGSKAYLRVDVNQ 197 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS--------------CSHHHHHHHHHHHHHSSTTCCEEEECTT
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC--------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 45555554344455677777777767999999987542 3455567889999987 4899999866
Q ss_pred Chh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.++ +..++++.+++.|++.|-= | +.+..+...+++++.. ++||
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~~~~~~~~l~~~~-~iPi 242 (370)
T 1chr_A 198 AWDEQVASVYIPELEALGVELIEQ-----------------P-----------------VGRENTQALRRLSDNN-RVAI 242 (370)
T ss_dssp CCCTTHHHHHTHHHHTTTEEEEEC-----------------C-----------------SCTTCHHHHHHHHHHS-CSEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCCE
Confidence 444 6778999999988665520 1 1222367778888888 6999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
++..-+.+.+|+.+++..| ++.||+--.-. .|..-..++.
T Consensus 243 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i~ 283 (370)
T 1chr_A 243 MADESLSTLASAFDLARDRSVDVFSLKLCNM-GGVSATQKIA 283 (370)
T ss_dssp EESSSCCSHHHHHHHHTTTSCSEEEECTTTS-CSHHHHHHHH
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEECcccc-CCHHHHHHHH
Confidence 9999999999999999865 89999876665 3444444443
No 380
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.80 E-value=0.0023 Score=70.21 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=29.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++..
T Consensus 19 dvvIIGgG~~Gl~~A~~La~~G~~-V~llE~~~ 50 (382)
T 1ryi_A 19 EAVVIGGGIIGSAIAYYLAKENKN-TALFESGT 50 (382)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 399999999999999999999975 99998753
No 381
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.80 E-value=0.0024 Score=73.24 Aligned_cols=107 Identities=13% Similarity=0.143 Sum_probs=64.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCccc-cC---------CHHH----HHHH---HhcCcEEecCCCceE
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNI-RA---------VPEE----VQLA---WEEKCEFLPFMSPVQ 210 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~~-~~---------~~~~----~~~~---~~~gV~i~~~~~v~~ 210 (842)
.||||||||+.|+.+|..|.+.+++ ||||++++...+ |. .+.. +..+ ...+++++.. .++.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~-VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ 120 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYN-VSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATS 120 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCE-EEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCc-EEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEE
Confidence 3599999999999999999888875 999998863211 10 0111 1222 2347888755 6777
Q ss_pred EEccCCcEEEEEEEeec---ccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTE---QNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~---~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
|..+...|+ +...+.. ...........++..++++|.+|+|+|.+|
T Consensus 121 ID~~~k~V~-l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~ 169 (502)
T 4g6h_A 121 INPDRNTVT-IKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP 169 (502)
T ss_dssp EEGGGTEEE-EEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEE
T ss_pred EEhhhCEEE-EeecccceeecccccccccccCCceEEeCCEEEEcCCccc
Confidence 764433332 2211110 001111111234456899999999999984
No 382
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.76 E-value=0.0022 Score=72.44 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=64.7
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCc-ccc---------C----CHHH-----HHHHHhcCcEEecCCC
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCT-NIR---------A----VPEE-----VQLAWEEKCEFLPFMS 207 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~-~~~---------~----~~~~-----~~~~~~~gV~i~~~~~ 207 (842)
+|+|||||..|+.+|..|++. |.+ |+|+++++.. ..+ . .... ...+.+.|++++.++.
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~-V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDAD-VTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCE-EEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCc-EEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 489999999999999999998 764 9999987631 000 0 1111 1334567999988888
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
++.+..++.. +.+.+. .+++..++.+|.+|+|+|.+|
T Consensus 81 v~~i~~~~~~---v~v~~~----------~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 81 VTNVDPETKT---IKVKDL----------ITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp EEEEEGGGTE---EEEEET----------TTCCEEEEECSEEEECCCEEE
T ss_pred EEEEEcCCCE---EEEEec----------CCCceEEEECCEEEEccCCCc
Confidence 8888643333 333321 022345799999999999884
No 383
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.76 E-value=0.0027 Score=67.48 Aligned_cols=92 Identities=14% Similarity=0.162 Sum_probs=60.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC----------ccccC-----CHHHH-----HHHHhcCcEEecCCCc
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC----------TNIRA-----VPEEV-----QLAWEEKCEFLPFMSP 208 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~----------~~~~~-----~~~~~-----~~~~~~gV~i~~~~~v 208 (842)
+|+|||||+.|+.+|..|.+.|..+|+++++... ...+. ...++ +.+.+.|++++. ..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 4999999999999999999999723999998531 00111 11221 223456899887 677
Q ss_pred eEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+...++.+ .|.+. ++ .++.+|.||+|+|..|
T Consensus 82 ~~i~~~~~~~-~v~~~-------------~g--~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 82 QRVSKKDSHF-VILAE-------------DG--KTFEAKSVIIATGGSP 114 (311)
T ss_dssp EEEEEETTEE-EEEET-------------TS--CEEEEEEEEECCCEEE
T ss_pred EEEEEcCCEE-EEEEc-------------CC--CEEECCEEEECCCCCC
Confidence 7776433322 13221 22 2689999999999873
No 384
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.76 E-value=0.0042 Score=72.46 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=28.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
.|+|||||..|+++|..+++.|.+ |.|+++.
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G~k-VlLIEk~ 59 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMGAK-TAMFVLN 59 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-EEEEEec
Confidence 399999999999999999999986 9999986
No 385
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.76 E-value=0.0028 Score=70.69 Aligned_cols=92 Identities=16% Similarity=0.200 Sum_probs=62.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCcccc--CCH-HHHH----------HHHhcCcEEecCCCceEEEc
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTNIR--AVP-EEVQ----------LAWEEKCEFLPFMSPVQVDV 213 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~~~--~~~-~~~~----------~~~~~gV~i~~~~~v~~v~~ 213 (842)
.+|+|||||..|+.+|..|.+.|.+ +|+++++.+..... ... ..+. .+.+.|++++.++.++.+..
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~ 87 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDP 87 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEET
T ss_pred CcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEEC
Confidence 3599999999999999999999864 59999987632111 111 1111 12345788888877877763
Q ss_pred cCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 214 KDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 214 ~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.... |.+. +| .++.+|.+|+|+|.+|
T Consensus 88 ~~~~---v~~~-------------~g--~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 88 QAHT---VALS-------------DG--RTLPYGTLVLATGAAP 113 (408)
T ss_dssp TTTE---EEET-------------TS--CEEECSEEEECCCEEE
T ss_pred CCCE---EEEC-------------CC--CEEECCEEEECCCCCC
Confidence 2222 2222 12 2689999999999984
No 386
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.74 E-value=0.0033 Score=67.00 Aligned_cols=89 Identities=19% Similarity=0.162 Sum_probs=55.7
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc----------cccCC----HHH-----HHHHHhcCcEEecCCCceE
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT----------NIRAV----PEE-----VQLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~----------~~~~~----~~~-----~~~~~~~gV~i~~~~~v~~ 210 (842)
|+|||||+.|+.+|..|++.|.+ |+|+++.... .+|.. ..+ .....+.+..+........
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~-V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLK-TVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 99999999999999999999975 9999875310 01111 111 1223345666665555544
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
........ + . .++ .++.+|.+|+|||.+|
T Consensus 88 ~~~~~~~~--~--~------------~~~--~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 88 EDKGEYKV--I--N------------FGN--KELTAKAVIIATGAEY 116 (312)
T ss_dssp EECSSCEE--E--E------------CSS--CEEEEEEEEECCCEEE
T ss_pred eeeeccee--e--c------------cCC--eEEEeceeEEcccCcc
Confidence 43221111 1 1 112 3689999999999884
No 387
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.74 E-value=0.0037 Score=73.15 Aligned_cols=30 Identities=30% Similarity=0.571 Sum_probs=28.5
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
|+|||||..|+++|..|++.|.+ |+|+++.
T Consensus 31 VIVIGgG~AGl~AAlaLAr~G~k-VlLIEk~ 60 (651)
T 3ces_A 31 VIIIGGGHAGTEAAMAAARMGQQ-TLLLTHN 60 (651)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred EEEECChHHHHHHHHHHHhCCCC-EEEEeec
Confidence 99999999999999999999986 9999986
No 388
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.74 E-value=0.0036 Score=69.26 Aligned_cols=32 Identities=28% Similarity=0.191 Sum_probs=29.3
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+.+|..|++.|.+ |+|+++++
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G~~-V~viE~~~ 39 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQGHR-VVVVEQAR 39 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 499999999999999999999986 99999764
No 389
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=96.74 E-value=0.01 Score=65.59 Aligned_cols=133 Identities=17% Similarity=0.135 Sum_probs=101.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+.++ |.+++++.+.++++.+.|+..+.+++++ +++.-.+.+++||+.+ ++++.|....
T Consensus 147 v~~y~~---g~~~e~~~~~a~~~~~~G~~~iKlK~g~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN~ 208 (392)
T 3ddm_A 147 IGVYAS---GINPENPEDVVARKAAEGYRAFKLKVGF---------------DDARDVRNALHVRELLGAATPLMADANQ 208 (392)
T ss_dssp EEEEEE---EECSSSHHHHHHHHHHHTCCCEEEECSS---------------CHHHHHHHHHHHHHHHCSSSCEEEECTT
T ss_pred eeEEee---cCCHHHHHHHHHHHHHcCCCEEEEecCC---------------CHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 455554 2347888888888888899999998753 4566778899999985 6899999866
Q ss_pred Chh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccch-HHHHHHHHhhCCCCc
Q psy16199 642 NIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMG-LKAVSSIAKMFPNFP 718 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~a-l~~v~~i~~~~~~ip 718 (842)
.++ +..++++.+++.|++.|-= | +.|-. ++..+++++.. ++|
T Consensus 209 ~~~~~~A~~~~~~L~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~~l~~~~-~iP 253 (392)
T 3ddm_A 209 GWDLPRARQMAQRLGPAQLDWLEE-----------------P-----------------LRADRPAAEWAELAQAA-PMP 253 (392)
T ss_dssp CCCHHHHHHHHHHHGGGCCSEEEC-----------------C-----------------SCTTSCHHHHHHHHHHC-SSC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEC-----------------C-----------------CCccchHHHHHHHHHhc-CCC
Confidence 544 6778899999998887631 1 11222 66778888888 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
|++...+.+.+|+.+++..| +|.||+--.-.
T Consensus 254 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 285 (392)
T 3ddm_A 254 LAGGENIAGVAAFETALAARSLRVMQPDLAKW 285 (392)
T ss_dssp EEECTTCCSHHHHHHHHHHTCEEEECCCTTTT
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCcchh
Confidence 99999999999999999876 78887754433
No 390
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.73 E-value=0.0028 Score=71.50 Aligned_cols=95 Identities=11% Similarity=0.101 Sum_probs=64.6
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCcc-cc-----------CCHHH-----HHHHHhcCcEEecCCCce
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTN-IR-----------AVPEE-----VQLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~-~~-----------~~~~~-----~~~~~~~gV~i~~~~~v~ 209 (842)
+|+|||||..|+.+|..|++. |. +|+|+++.+... .+ ...++ .+.+.+.|++++.++.++
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~-~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDA-EIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTS-EEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCC-eEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 499999999999999999998 75 599999876311 00 00111 233456799998888888
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+...+.. |.+.+. .+|+..++.+|.+|+|+|.+|
T Consensus 81 ~i~~~~~~---v~~~~~----------~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 81 AIQPKEHQ---VTVKDL----------VSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp EEETTTTE---EEEEET----------TTCCEEEEECSEEEECCCEEE
T ss_pred EEeCCCCE---EEEEec----------CCCceEEEeCCEEEEcCCCCc
Confidence 88643332 333321 023334689999999999884
No 391
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=96.71 E-value=0.019 Score=63.56 Aligned_cols=135 Identities=12% Similarity=0.016 Sum_probs=101.5
Q ss_pred HHHHHHHHHhhcCcCEEEEe-ccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh---hcHHHHHH
Q psy16199 578 DWLELSKKTEKAGADALELN-LSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI---TNITDIAK 651 (842)
Q Consensus 578 ~~~~~a~~~~~agaD~ielN-~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~---~~~~~~a~ 651 (842)
++.+.++...+.|+..+-++ ++.+ ..+++.-.+++++||+.+ ++||.+.....+ .+..++++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~------------~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~ 222 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND------------KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFR 222 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT------------TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC------------ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHH
Confidence 56667777777899999994 3211 145777889999999986 689999987755 46789999
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHH
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVA 731 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da 731 (842)
.+++.|++.|-- | +.|-.+...+++++.+ ++||++.+.+.+.+|+
T Consensus 223 ~L~~~~i~~iEe-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 267 (394)
T 3mqt_A 223 QLEDIDLYFIEA-----------------C-----------------LQHDDLIGHQKLAAAI-NTRLCGAEMSTTRFEA 267 (394)
T ss_dssp HTGGGCCSEEES-----------------C-----------------SCTTCHHHHHHHHHHS-SSEEEECTTCCHHHHH
T ss_pred HHhhcCCeEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHH
Confidence 999999887731 1 1122366778888988 6999999999999999
Q ss_pred HHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 732 LQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 732 ~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
.+++..| +|.||+--.-. .|..-..++.
T Consensus 268 ~~~l~~~~~d~v~~k~~~~-GGit~~~~ia 296 (394)
T 3mqt_A 268 QEWLEKTGISVVQSDYNRC-GGVTELLRIM 296 (394)
T ss_dssp HHHHHHHCCSEECCCTTTS-SCHHHHHHHH
T ss_pred HHHHHcCCCCeEecCcccc-CCHHHHHHHH
Confidence 9999865 89999877666 4554444443
No 392
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.69 E-value=0.0056 Score=65.36 Aligned_cols=90 Identities=21% Similarity=0.270 Sum_probs=60.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecC----------ccccC----CHHHH-----HHHHhcCcEEecCCCce
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGC----------TNIRA----VPEEV-----QLAWEEKCEFLPFMSPV 209 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~----------~~~~~----~~~~~-----~~~~~~gV~i~~~~~v~ 209 (842)
+|+|||||..|+.+|..|.+.|.+ |+++++... ...+. ...++ +.+.+.|++++. ..++
T Consensus 18 dvvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 18 DVVIVGAGAAGFSAAVYAARSGFS-VAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred cEEEECcCHHHHHHHHHHHhCCCc-EEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 499999999999999999999975 999998521 01121 11221 223456899887 6777
Q ss_pred EEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 210 ~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.+...++.+. |.. ++. ++.+|.||+|+|..|
T Consensus 96 ~i~~~~~~~~-v~~--------------~~~--~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 96 SIKKTQGGFD-IET--------------NDD--TYHAKYVIITTGTTH 126 (319)
T ss_dssp EEEEETTEEE-EEE--------------SSS--EEEEEEEEECCCEEE
T ss_pred EEEEeCCEEE-EEE--------------CCC--EEEeCEEEECCCCCc
Confidence 7763333222 322 122 688999999999873
No 393
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=96.68 E-value=0.013 Score=65.34 Aligned_cols=137 Identities=12% Similarity=0.054 Sum_probs=99.3
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCC----CCc----ccCCCC---HHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGER----GMG----LACGQD---PEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~----~~G----~~~~~~---~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.+++++.+.++.+.+.|+.++-+.+..+...... |.+ .....+ .+...+++++||+.+ +++|.+...
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3688999999888888999999988432110000 100 000112 345678899999885 689999987
Q ss_pred CCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 641 PNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 641 p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..+ .+..++++.+++.|++.|-. |. ..++..+++++.+ ++|
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~-----------------P~-------------------~d~~~~~~l~~~~-~iP 264 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEI-----------------DS-------------------YSPQGLAYVRNHS-PHP 264 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEEC-----------------CC-------------------SCHHHHHHHHHTC-SSC
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEe-----------------Cc-------------------CCHHHHHHHHhhC-CCC
Confidence 655 36778899999999887753 10 1266678888887 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehh
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSA 747 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta 747 (842)
|++.+.+.+.+++.+++..| +|.||+=-.
T Consensus 265 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 294 (409)
T 3go2_A 265 ISSCETLFGIREFKPFFDANAVDVAIVDTI 294 (409)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEEEECHH
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEEeCCC
Confidence 99999999999999999976 899998654
No 394
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.68 E-value=0.012 Score=59.53 Aligned_cols=155 Identities=14% Similarity=0.127 Sum_probs=93.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCC--ccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVK--IPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~--~Pv~vKl~p 641 (842)
.++++-+-....++.+.+. +.++|+|++.+|.... .+.+.+.++.+++.-. .-+.|-+.+
T Consensus 59 ~~iflDlKl~Dip~t~~~~---~~~~Gad~vtVH~~~g---------------~~~l~~a~~~~~~~g~~~~~~~Vt~lt 120 (221)
T 3exr_A 59 KIIVADTKCADAGGTVAKN---NAVRGADWMTCICSAT---------------IPTMKAARKAIEDINPDKGEIQVELYG 120 (221)
T ss_dssp SEEEEEEEECSCHHHHHHH---HHTTTCSEEEEETTSC---------------HHHHHHHHHHHHHHCTTTCEEEEECCS
T ss_pred CcEEEEEEeeccHHHHHHH---HHHcCCCEEEEeccCC---------------HHHHHHHHHHHHhcCCCcceEEEEEcC
Confidence 4566666554456666655 4567999999985322 3456677777776532 344555544
Q ss_pred ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC-CCCcEE
Q psy16199 642 NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF-PNFPIL 720 (842)
Q Consensus 642 ~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~-~~ipIi 720 (842)
.. +. +-++.+.+.|++-+++.=. . .....|. . .+..-++.+++.. .+++|.
T Consensus 121 s~-~~-~~~~~~~~~~~~~~v~~~a-~-------------------~~~~~Gv---v---~s~~e~~~ir~~~~~~~~i~ 172 (221)
T 3exr_A 121 DW-TY-DQAQQWLDAGISQAIYHQS-R-------------------DALLAGE---T---WGEKDLNKVKKLIEMGFRVS 172 (221)
T ss_dssp SC-CH-HHHHHHHHTTCCEEEEECC-H-------------------HHHHHTC---C---CCHHHHHHHHHHHHHTCEEE
T ss_pred CC-CH-HHHHHHHcCCHHHHHHHHH-H-------------------hcCCCcc---c---cCHHHHHHHHHhhcCCceEE
Confidence 32 22 2344557789988777211 0 0011121 1 1122344444433 258899
Q ss_pred EecCcCCHHHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHHH
Q psy16199 721 GIGGIDSADVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQT 765 (842)
Q Consensus 721 ~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~~ 765 (842)
..||| +++++.++..+|||.+-+||++... +| ..++++++.++.
T Consensus 173 v~gGI-~~~~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~~ 218 (221)
T 3exr_A 173 VTGGL-SVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKR 218 (221)
T ss_dssp EESSC-CGGGGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred EECCC-CHHHHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHHH
Confidence 99999 7788888889999999999998843 23 345566665554
No 395
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=96.68 E-value=0.028 Score=61.27 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=102.3
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCChh--cHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNIT--NITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~~ 649 (842)
.+++++.+.++.+.+.|+..+-+++++ +++.-.+.+++||+.+ ++++.+.....++ +..++
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~---------------~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~ 202 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGT---------------GIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKA 202 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCC---------------CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHH
Confidence 478888888887777899999998754 3455568889999875 6899999866543 66778
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|++.|-= | +.|-.++..+++++.. ++||++.+.+.+.+
T Consensus 203 ~~~L~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 247 (354)
T 3jva_A 203 IQALADYQIELVEQ-----------------P-----------------VKRRDLEGLKYVTSQV-NTTIMADESCFDAQ 247 (354)
T ss_dssp HHHTTTSCEEEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSEEEESTTCCSHH
T ss_pred HHHHHhcCCCEEEC-----------------C-----------------CChhhHHHHHHHHHhC-CCCEEEcCCcCCHH
Confidence 88888877655521 1 1222367778888888 69999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 730 VALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
|+.+++..| ++.||+--.-. .|..-..++.+
T Consensus 248 ~~~~~l~~~~~d~v~~k~~~~-GGit~~~~i~~ 279 (354)
T 3jva_A 248 DALELVKKGTVDVINIKLMKC-GGIHEALKINQ 279 (354)
T ss_dssp HHHHHHHHTCCSEEEECHHHH-TSHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECchhc-CCHHHHHHHHH
Confidence 999999865 79999887766 45554444433
No 396
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.67 E-value=0.031 Score=56.90 Aligned_cols=125 Identities=17% Similarity=0.111 Sum_probs=85.6
Q ss_pred cceEEEeccC-----CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEE-
Q psy16199 564 SILIASIMCT-----YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFV- 637 (842)
Q Consensus 564 ~pvi~si~~g-----~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~v- 637 (842)
.-+|+|.-+- +++++..++|+.++++|+.+|.++ + .+.++++|+.+++||+-
T Consensus 18 ~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~----~------------------~~~i~~ir~~v~~Pvig~ 75 (229)
T 3q58_A 18 GGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE----G------------------IENLRTVRPHLSVPIIGI 75 (229)
T ss_dssp CCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE----S------------------HHHHHHHGGGCCSCEEEE
T ss_pred CCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC----C------------------HHHHHHHHHhcCCCEEEE
Confidence 3577776531 237899999999999999999983 0 25688999999999973
Q ss_pred -Ee-cC----ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcccc-chHHHHHHH
Q psy16199 638 -KL-TP----NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP-MGLKAVSSI 710 (842)
Q Consensus 638 -Kl-~p----~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p-~al~~v~~i 710 (842)
|- .+ .++...+-++.+.++|+|.|.+.-+... .| ...++++.+
T Consensus 76 ~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~------------------------------~p~~l~~~i~~~ 125 (229)
T 3q58_A 76 IKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS------------------------------RPVDIDSLLTRI 125 (229)
T ss_dssp CBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC------------------------------CSSCHHHHHHHH
T ss_pred EeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC------------------------------ChHHHHHHHHHH
Confidence 32 11 1222233467788999998877433110 11 124566666
Q ss_pred HhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEE
Q psy16199 711 AKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 711 ~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv 744 (842)
++. ++++++ .+.|.+++.++..+||+.|.+
T Consensus 126 ~~~--g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 126 RLH--GLLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp HHT--TCEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred HHC--CCEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 553 455554 689999999999999999954
No 397
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.0023 Score=66.62 Aligned_cols=85 Identities=14% Similarity=0.057 Sum_probs=69.6
Q ss_pred hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEec
Q psy16199 644 TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIG 723 (842)
Q Consensus 644 ~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~G 723 (842)
.++.++|+.+.+.|++.+.+.. ++ + ...+.++++++.+ .+||...|
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvD---------L~-------------------~-----~n~~~i~~i~~~~-~~pv~vgG 83 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIK---------LG-------------------P-----NNDDAAREALQES-PQFLQVGG 83 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEE---------ES-------------------S-----SCHHHHHHHHHHS-TTTSEEES
T ss_pred CCHHHHHHHHHHcCCCEEEEEe---------CC-------------------C-----CCHHHHHHHHhcC-CceEEEeC
Confidence 5789999999999999998832 11 0 2277889999988 69999999
Q ss_pred CcCCHHHHHHHHHhCCCEEEEehhhhcc-C---chhHHHHHHHHH
Q psy16199 724 GIDSADVALQFIQAGAHAVQICSAVQNQ-D---FTVVDDYITGLQ 764 (842)
Q Consensus 724 GI~t~~da~~~l~~GA~~Vqv~ta~l~~-g---p~~~~~i~~~l~ 764 (842)
||++- |+.+++ +||+-|-++|+++.+ | |.++.++.+.+.
T Consensus 84 Gir~~-~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 84 GINDT-NCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp SCCTT-THHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHC
T ss_pred CCCHH-HHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhC
Confidence 99986 999999 999999999999943 2 888877776653
No 398
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.65 E-value=0.0036 Score=69.14 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=28.8
Q ss_pred cEEEEcCChhHHHHHHHHHH-cC-CcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALR-CG-ANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~-~G-~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+.+|..|++ .| .+ |+|+++..
T Consensus 23 dVvIIG~G~~Gl~~A~~La~~~G~~~-V~vlE~~~ 56 (405)
T 2gag_B 23 DAIIVGGGGHGLATAYFLAKNHGITN-VAVLEKGW 56 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCCC-EEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhcCCCc-EEEEeCCC
Confidence 39999999999999999999 88 65 99998764
No 399
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.64 E-value=0.002 Score=69.19 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=60.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEe----ecCc-----------cccCC-----HHHH-----HHHHhcCcEEe
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFR----KGCT-----------NIRAV-----PEEV-----QLAWEEKCEFL 203 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r----~~~~-----------~~~~~-----~~~~-----~~~~~~gV~i~ 203 (842)
+|+|||||..|+.+|..|.+.|.+ |+++++ .... ..+.. ..++ +.+.+.|++++
T Consensus 10 ~vvIIG~G~aGl~~A~~l~~~g~~-v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 10 RLCIVGSGPAAHTAAIYAARAELK-PLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-CEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCe-EEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 499999999999999999999976 999998 1110 01111 1111 23445699999
Q ss_pred cCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 204 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 204 ~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
.++ ++.+...++.+. |.+ + + .++.+|.||+|+|..|
T Consensus 89 ~~~-v~~i~~~~~~~~-v~~-~-------------~--~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 89 TET-VTKVDFSSKPFK-LFT-D-------------S--KAILADAVILAIGAVA 124 (333)
T ss_dssp CCC-CCEEECSSSSEE-EEC-S-------------S--EEEEEEEEEECCCEEE
T ss_pred EeE-EEEEEEcCCEEE-EEE-C-------------C--cEEEcCEEEECCCCCc
Confidence 886 888764333222 222 1 2 3689999999999884
No 400
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.64 E-value=0.0073 Score=70.28 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=39.9
Q ss_pred HHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 195 AWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 195 ~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
+.+.|+++++++.++++..+++++.+|++.+.. +|+..++.||.||.|+|.-
T Consensus 180 a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~----------tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 180 AVARGAVALNYMKVESFIYDQGKVVGVVAKDRL----------TDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHTTCEEEESEEEEEEEEETTEEEEEEEEETT----------TCCEEEEEEEEEEECCGGG
T ss_pred HHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcC----------CCceEEEECCEEEECCCcc
Confidence 345688999888998887667778778776531 3455689999999999954
No 401
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.61 E-value=0.033 Score=56.77 Aligned_cols=125 Identities=22% Similarity=0.165 Sum_probs=85.0
Q ss_pred cceEEEeccC-----CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEE-
Q psy16199 564 SILIASIMCT-----YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFV- 637 (842)
Q Consensus 564 ~pvi~si~~g-----~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~v- 637 (842)
.-+|+|.-+- +++++..++|+..+++|+.+|.+| + .+.++.+|+.+++||+-
T Consensus 18 ~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~----~------------------~~~i~~ir~~v~~Pvig~ 75 (232)
T 3igs_A 18 GGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE----G------------------IDNLRMTRSLVSVPIIGI 75 (232)
T ss_dssp CCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE----S------------------HHHHHHHHTTCCSCEEEE
T ss_pred CCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC----C------------------HHHHHHHHHhcCCCEEEE
Confidence 3577776531 237889999999999999999984 0 25688999999999973
Q ss_pred -Eec-C----ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcccc-chHHHHHHH
Q psy16199 638 -KLT-P----NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP-MGLKAVSSI 710 (842)
Q Consensus 638 -Kl~-p----~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p-~al~~v~~i 710 (842)
|-. + .++...+-++.+.++|+|.|.+.-+... .| ...++++.+
T Consensus 76 ~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~------------------------------~p~~l~~~i~~~ 125 (232)
T 3igs_A 76 IKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ------------------------------RPVAVEALLARI 125 (232)
T ss_dssp CBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC------------------------------CSSCHHHHHHHH
T ss_pred EeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC------------------------------CHHHHHHHHHHH
Confidence 321 1 1222233467788999999877432110 11 124556666
Q ss_pred HhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEE
Q psy16199 711 AKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 711 ~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv 744 (842)
++. +++++. .+.+.+++.++..+||+.|.+
T Consensus 126 ~~~--g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 126 HHH--HLLTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp HHT--TCEEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred HHC--CCEEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 543 455554 689999999999999999954
No 402
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.61 E-value=0.053 Score=57.25 Aligned_cols=163 Identities=12% Similarity=0.070 Sum_probs=107.2
Q ss_pred cceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEeccC-CCCCCCCCCcccCCCCHHHHHHHHHHHHhh-CCccEEEEec
Q psy16199 564 SILIASIMCTY-NKDDWLELSKKTEKAGADALELNLSC-PHGMGERGMGLACGQDPEMVRNISLWVRSS-VKIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~sc-P~~~~~~~~G~~~~~~~~~~~~ii~~v~~~-~~~Pv~vKl~ 640 (842)
.|||+-+-.|+ +++...+.+++++++|+++|.|-=.. |...+..+ |..+ .+.+...+-+++++++ .+.-|+.+..
T Consensus 90 ~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~-gk~l-~~~~e~~~rI~Aa~~A~~~~~I~ARtd 167 (305)
T 3ih1_A 90 LPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLN-GKKL-VTTEELVQKIKAIKEVAPSLYIVARTD 167 (305)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTT-CCCB-CCHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCC-CCcc-cCHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 68998876664 57788899999999999999885331 21111111 2222 5666666777777766 2344555654
Q ss_pred C----ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCC
Q psy16199 641 P----NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN 716 (842)
Q Consensus 641 p----~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ 716 (842)
. .+++..+-++++.++|||+|.+-. +.+.+.++++.+.+ +
T Consensus 168 a~~~~g~~~ai~Ra~ay~eAGAD~i~~e~-----------------------------------~~~~~~~~~i~~~~-~ 211 (305)
T 3ih1_A 168 ARGVEGLDEAIERANAYVKAGADAIFPEA-----------------------------------LQSEEEFRLFNSKV-N 211 (305)
T ss_dssp CHHHHCHHHHHHHHHHHHHHTCSEEEETT-----------------------------------CCSHHHHHHHHHHS-C
T ss_pred cccccCHHHHHHHHHHHHHcCCCEEEEcC-----------------------------------CCCHHHHHHHHHHc-C
Confidence 3 256777888999999999999810 11367788899998 6
Q ss_pred CcEEEe---cCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 717 FPILGI---GGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 717 ipIi~~---GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
+|++++ +|-.-.-.+.++-++|.+.|-++..++.. ...-+.+.++.++
T Consensus 212 ~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra---a~~a~~~~~~~i~ 262 (305)
T 3ih1_A 212 APLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV---AAKAYENVFTLIK 262 (305)
T ss_dssp SCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH---HHHHHHHHHHHHH
T ss_pred CCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH---HHHHHHHHHHHHH
Confidence 899865 44322234567777999999988887743 3444444444444
No 403
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=96.60 E-value=0.014 Score=65.29 Aligned_cols=150 Identities=10% Similarity=0.016 Sum_probs=105.4
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCc---ccCC-----------CC----HHHHHHHHH
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMG---LACG-----------QD----PEMVRNISL 625 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G---~~~~-----------~~----~~~~~~ii~ 625 (842)
.|+.+++. +.+++++.+.++.+.+.|+.+|-+.++.|......+.+ .... .+ .+...++++
T Consensus 140 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~ 218 (425)
T 3vcn_A 140 VTVYGHAN-GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFE 218 (425)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHH
Confidence 45655554 46899999999888888999999999875211100000 0000 01 234567888
Q ss_pred HHHhhC--CccEEEEecCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcccc
Q psy16199 626 WVRSSV--KIPFFVKLTPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701 (842)
Q Consensus 626 ~v~~~~--~~Pv~vKl~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p 701 (842)
+||+.+ +++|.+.....+ .+..++++.+++.|++.|-- |. .|
T Consensus 219 avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq-----------------P~-----------------~~ 264 (425)
T 3vcn_A 219 RAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLED-----------------SV-----------------PA 264 (425)
T ss_dssp HHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC-----------------CS-----------------CC
T ss_pred HHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC-----------------CC-----------------Ch
Confidence 999886 689999986544 47889999999999887731 10 11
Q ss_pred chHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 702 MGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 702 ~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
..++..+++++.+ ++||++.+.+.+.+++.+++..| +|.||+--.-.
T Consensus 265 ~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 312 (425)
T 3vcn_A 265 ENQAGFRLIRQHT-TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHA 312 (425)
T ss_dssp SSTTHHHHHHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred hhHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhc
Confidence 1244567788888 69999999999999999999976 88998766555
No 404
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.60 E-value=0.0044 Score=65.78 Aligned_cols=93 Identities=17% Similarity=0.134 Sum_probs=61.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc---------cccC----CHHHH-----HHHHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT---------NIRA----VPEEV-----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~---------~~~~----~~~~~-----~~~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||+.|+.+|..|.+.|.+ |++++++.-. .+.. ...++ +.+.+.|++++.++.++.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~-v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 81 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIR-TGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASK 81 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-EEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEE
Confidence 399999999999999999999975 9999653100 0100 01111 223456999999988888
Q ss_pred EEccC--CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKD--NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~--~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.... +....|.+. +| .++.+|.||+|+|..|
T Consensus 82 i~~~~~~~~~~~v~~~-------------~g--~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 82 LIPAAVEGGLHQIETA-------------SG--AVLKARSIIVATGAKW 115 (310)
T ss_dssp EECCSSTTCCEEEEET-------------TS--CEEEEEEEEECCCEEE
T ss_pred EEecccCCceEEEEEC-------------CC--CEEEeCEEEECcCCCc
Confidence 85321 112223332 12 2689999999999874
No 405
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.59 E-value=0.0073 Score=68.06 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=29.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeec
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKG 181 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~ 181 (842)
.+|+|||||.+|+.+|..|++.|.. +|+++++.+
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 41 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCC
Confidence 3599999999999999999999861 499999864
No 406
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.58 E-value=0.013 Score=58.53 Aligned_cols=76 Identities=28% Similarity=0.382 Sum_probs=62.9
Q ss_pred cEEEEecC-ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHh
Q psy16199 634 PFFVKLTP-NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAK 712 (842)
Q Consensus 634 Pv~vKl~p-~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~ 712 (842)
||+.=+.. +.++...++++|.+.|++.|-++.+ .|.+++.|+++++
T Consensus 14 ~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~---------------------------------t~~a~~~I~~l~~ 60 (217)
T 3lab_A 14 PLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLR---------------------------------TEAGLAAISAIKK 60 (217)
T ss_dssp SEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETT---------------------------------STTHHHHHHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCC---------------------------------CccHHHHHHHHHH
Confidence 44443432 3568999999999999999999644 3445899999999
Q ss_pred hCCCCcEEEecCcCCHHHHHHHHHhCCCEEE
Q psy16199 713 MFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743 (842)
Q Consensus 713 ~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vq 743 (842)
++|+ .+||.|-|.|.+++.+++++||+.+.
T Consensus 61 ~~p~-~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 61 AVPE-AIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp HCTT-SEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred HCCC-CeEeeccccCHHHHHHHHHcCCCEEE
Confidence 9965 79999999999999999999999984
No 407
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.56 E-value=0.0034 Score=71.77 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=64.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHcC---CcEEEEEEeecCcc-cc-----------CCHHH-----HHHHHhcCcEEecCCC
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCG---ANKVLVVFRKGCTN-IR-----------AVPEE-----VQLAWEEKCEFLPFMS 207 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G---~~~Vtlv~r~~~~~-~~-----------~~~~~-----~~~~~~~gV~i~~~~~ 207 (842)
.+|+|||||..|+.+|..|++.| . +|+|+++++... .+ ...+. .+.+.+.|++++.++.
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~-~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDAN-EIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGS-EEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCC-eEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 45999999999999999999987 5 499999876210 00 00111 2334567999999988
Q ss_pred ceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 208 PVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 208 v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
++.+...+..+ .+.. +++..++.+|.||+|+|.+|
T Consensus 115 v~~i~~~~~~v---~v~~------------~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 115 VQSIDYDAKTV---TALV------------DGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp EEEEETTTTEE---EEEE------------TTEEEEEECSEEEECCCEEE
T ss_pred EEEEECCCCEE---EEEe------------CCcEEEEECCEEEECCCCCc
Confidence 88886433332 2220 12235799999999999884
No 408
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=96.54 E-value=0.046 Score=60.39 Aligned_cols=144 Identities=10% Similarity=0.118 Sum_probs=106.0
Q ss_pred cceEEEecc---CCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEE-E
Q psy16199 564 SILIASIMC---TYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFF-V 637 (842)
Q Consensus 564 ~pvi~si~~---g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~-v 637 (842)
.|+-.++.. ..+++++.+.++.+.+.|+..+.+++++ +++.-.+.+++||+.+ ++++. +
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~---------------~~~~d~~~v~avR~a~g~~~~l~~v 192 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK---------------NLDADEEFLSRVKEEFGSRVRIKSY 192 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS---------------CHHHHHHHHHHHHHHHGGGCEEEEE
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC---------------CHHHHHHHHHHHHHHcCCCCcEEEe
Confidence 355555530 2468888888888877899999999754 3566678889999885 68899 8
Q ss_pred EecCCh--hcHHHHHHHHHHCCC--CEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 638 KLTPNI--TNITDIAKAAYEGKA--DGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 638 Kl~p~~--~~~~~~a~~~~~~G~--d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
.....+ .+..++++.+++.|+ +.|-= | +.+-.++..+++++.
T Consensus 193 Dan~~~~~~~A~~~~~~l~~~~i~~~~iEq-----------------P-----------------~~~~d~~~~~~l~~~ 238 (391)
T 3gd6_A 193 DFSHLLNWKDAHRAIKRLTKYDLGLEMIES-----------------P-----------------APRNDFDGLYQLRLK 238 (391)
T ss_dssp ECTTCSCHHHHHHHHHHHTTCCSSCCEEEC-----------------C-----------------SCTTCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHhcCCCcceecC-----------------C-----------------CChhhHHHHHHHHHH
Confidence 876544 467788999999887 55520 1 122236778889998
Q ss_pred CCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 714 FPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 714 ~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
+ ++|| ...+.+.+|+.+++..| ++.||+--.-+ .|..-..++.
T Consensus 239 ~-~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~ia 282 (391)
T 3gd6_A 239 T-DYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFI-GGLTSAKKAA 282 (391)
T ss_dssp C-SSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHHH
T ss_pred c-CCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhc-CCHHHHHHHH
Confidence 8 6999 78899999999999976 89999987776 4555444443
No 409
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=96.53 E-value=0.043 Score=60.60 Aligned_cols=137 Identities=12% Similarity=0.056 Sum_probs=103.8
Q ss_pred cceEEEecc--CCCHhHHHHHHHHHhhc---CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEE
Q psy16199 564 SILIASIMC--TYNKDDWLELSKKTEKA---GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFF 636 (842)
Q Consensus 564 ~pvi~si~~--g~~~e~~~~~a~~~~~a---gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~ 636 (842)
.|+.+++.. ..+++++.+.++...+. |+..+-+.++.+ +++.-.+.+++||+.+ ++++.
T Consensus 158 v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~--------------~~~~d~~~v~avR~a~G~~~~l~ 223 (390)
T 3ugv_A 158 VKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD--------------DPAVDIETAEAVWDAVGRDTALM 223 (390)
T ss_dssp EEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS--------------SHHHHHHHHHHHHHHHCTTSEEE
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC--------------CHHHHHHHHHHHHHHhCCCCEEE
Confidence 456665531 14788888888888778 999999987542 4566678889999885 68999
Q ss_pred EEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhC
Q psy16199 637 VKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMF 714 (842)
Q Consensus 637 vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~ 714 (842)
+.....++ +..++++.+++.|++.|-= | +.|-.++..+++++..
T Consensus 224 vDaN~~~~~~~A~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~ 269 (390)
T 3ugv_A 224 VDFNQGLDMAEAMHRTRQIDDLGLEWIEE-----------------P-----------------VVYDNFDGYAQLRHDL 269 (390)
T ss_dssp EECTTCCCHHHHHHHHHHHTTSCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCEEEC-----------------C-----------------CCcccHHHHHHHHHhc
Confidence 99876554 6778899999988876631 1 1222366778888888
Q ss_pred CCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 715 PNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 715 ~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
++||++...+.+..|+.+++..| ++.||+--.-.
T Consensus 270 -~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~ 304 (390)
T 3ugv_A 270 -KTPLMIGENFYGPREMHQALQAGACDLVMPDFMRI 304 (390)
T ss_dssp -SSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHH
T ss_pred -CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 69999999999999999999976 88988765555
No 410
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.53 E-value=0.0097 Score=69.33 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=70.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc------------------------------------cc------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN------------------------------------IR------ 186 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~------------------------------------~~------ 186 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.+... +.
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G~~-V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGGVG-ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 499999999999999999999986 99999754210 00
Q ss_pred ---------------CCHHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEEC
Q psy16199 187 ---------------AVPEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKA 246 (842)
Q Consensus 187 ---------------~~~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~ 246 (842)
..... .+.+.+.|++++.++.++.+..+++.+. |++... +|+ .++.+
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~-v~~~~~-----------~G~-~~~~a 196 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE-VTVAGP-----------SGP-YPVRA 196 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE-EEEEET-----------TEE-EEEEE
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE-EEEEeC-----------CCc-EEEEe
Confidence 00011 1223456899999999988875445544 555321 222 57999
Q ss_pred CEEEEccccCcCChhHHhhcCCccc
Q psy16199 247 NYIISAFGSTLLDNDVLEAIKPVKL 271 (842)
Q Consensus 247 D~Vi~a~G~~~~~~~l~~~l~gl~~ 271 (842)
|.||.|.|.. +.+.+.+ |+.+
T Consensus 197 ~~vV~ADG~~---S~vR~~l-Gi~~ 217 (570)
T 3fmw_A 197 RYGVGCDGGR---STVRRLA-ADRF 217 (570)
T ss_dssp SEEEECSCSS---CHHHHHT-TCCC
T ss_pred CEEEEcCCCC---chHHHHc-CCCC
Confidence 9999999976 2344444 5543
No 411
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=96.52 E-value=0.023 Score=62.87 Aligned_cols=134 Identities=12% Similarity=0.029 Sum_probs=99.4
Q ss_pred HHHHHHHHHhhcCcCEEEEe-ccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCCh---hcHHHHHH
Q psy16199 578 DWLELSKKTEKAGADALELN-LSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNI---TNITDIAK 651 (842)
Q Consensus 578 ~~~~~a~~~~~agaD~ielN-~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~---~~~~~~a~ 651 (842)
++.+.++.+.+.|+..+-++ ++.+ ..+++.-.+.+++||+.+ ++++.+.....+ .+..++++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~ 227 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLN 227 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHH
Confidence 56667777777899999994 3321 145777888999999986 689999987655 47788999
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHH
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVA 731 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da 731 (842)
.+++.|++.|-- | +.|-.++..+++++.+ ++||++.+.+.+.+|+
T Consensus 228 ~L~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 272 (394)
T 3mkc_A 228 SIEDLELYFAEA-----------------T-----------------LQHDDLSGHAKLVENT-RSRICGAEMSTTRFEA 272 (394)
T ss_dssp HTGGGCCSEEES-----------------C-----------------SCTTCHHHHHHHHHHC-SSCBEECTTCCHHHHH
T ss_pred HhhhcCCeEEEC-----------------C-----------------CCchhHHHHHHHHhhC-CCCEEeCCCCCCHHHH
Confidence 999999887631 1 1122367778888888 6999999999999999
Q ss_pred HHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 732 LQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 732 ~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
.+++..| +|.||+--.-. .|..-..++
T Consensus 273 ~~~l~~~~~d~v~~k~~~~-GGit~~~~i 300 (394)
T 3mkc_A 273 EEWITKGKVHLLQSDYNRC-GGLTELRRI 300 (394)
T ss_dssp HHHHHTTCCSEECCCTTTT-THHHHHHHH
T ss_pred HHHHHcCCCCeEecCcccc-CCHHHHHHH
Confidence 9999976 89998766555 333333333
No 412
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=96.51 E-value=0.025 Score=62.01 Aligned_cols=123 Identities=15% Similarity=0.073 Sum_probs=92.6
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCC--hhcHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPN--ITNITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~--~~~~~~~ 649 (842)
.+++++.+.++++.++|++.|.++++ | +...+++++||+.+ ++++.+..... ..+ .++
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~-~----------------~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~-~~~ 201 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE-P----------------GWDVEPVRAVRERFGDDVLLQVDANTAYTLGD-APQ 201 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB-T----------------TBSHHHHHHHHHHHCTTSEEEEECTTCCCGGG-HHH
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC-c----------------hhHHHHHHHHHHhcCCCceEEEeccCCCCHHH-HHH
Confidence 37889999998888889999999873 2 11236677777765 57888877543 457 889
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|++.|-= | +.+..+...+++++.+ ++||++.+.+.+.+
T Consensus 202 ~~~l~~~~i~~iE~-----------------P-----------------~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~ 246 (368)
T 1sjd_A 202 LARLDPFGLLLIEQ-----------------P-----------------LEEEDVLGHAELARRI-QTPICLDESIVSAR 246 (368)
T ss_dssp HHTTGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHTTC-SSCEEESTTCCSHH
T ss_pred HHHHHhcCCCeEeC-----------------C-----------------CChhhHHHHHHHHHhC-CCCEEECCCcCCHH
Confidence 99999998886521 1 1122367778888887 69999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhh
Q psy16199 730 VALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l 749 (842)
++.+++..| ++.|++=-.-.
T Consensus 247 ~~~~~i~~~~~d~v~ik~~~~ 267 (368)
T 1sjd_A 247 AAADAIKLGAVQIVNIKPGRV 267 (368)
T ss_dssp HHHHHHHTTCCSEEEECTTTT
T ss_pred HHHHHHHcCCCCEEEeccccc
Confidence 999999976 89999854433
No 413
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=96.50 E-value=0.057 Score=59.42 Aligned_cols=136 Identities=11% Similarity=0.005 Sum_probs=104.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhc-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+.+++.. .+++++.+.++.+.+. |+..+-+.++.+ +++.-.+.+++||+.+ ++++.+...
T Consensus 157 v~~y~s~g~-~~~e~~~~~a~~~~~~~G~~~~KlKvG~~--------------~~~~d~~~v~avR~a~G~~~~l~vDaN 221 (383)
T 3toy_A 157 IPAYDSYGV-LDARDDERTLRTACDEHGFRAIKSKGGHG--------------DLATDEAMIKGLRALLGPDIALMLDFN 221 (383)
T ss_dssp EEEEEECSS-CCHHHHHHHHHHHHHTSCCCEEEEECCSS--------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eEEeEecCC-CCHHHHHHHHHHHHHccCCcEEEEecCCC--------------CHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 466666532 5788988888888777 999999987542 4566678889999885 689999987
Q ss_pred CChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 641 PNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 641 p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..++ +..++++.+++.|++.|-= | +.|-.++..+++++.. ++|
T Consensus 222 ~~~~~~~A~~~~~~l~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iP 266 (383)
T 3toy_A 222 QSLDPAEATRRIARLADYDLTWIEE-----------------P-----------------VPQENLSGHAAVRERS-EIP 266 (383)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSC
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEEC-----------------C-----------------CCcchHHHHHHHHhhc-CCC
Confidence 6554 6778999999998876621 1 1222366778888888 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
|++...+.+..|+.+++..| ++.||+--.-.
T Consensus 267 Ia~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~ 298 (383)
T 3toy_A 267 IQAGENWWFPRGFAEAIAAGASDFIMPDLMKV 298 (383)
T ss_dssp EEECTTCCHHHHHHHHHHHTCCSEECCCTTTT
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 99999999999999999976 78888765544
No 414
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=96.49 E-value=0.066 Score=58.79 Aligned_cols=145 Identities=15% Similarity=0.102 Sum_probs=105.0
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-.++.. .++++..+.++...+.|+..+-+.++. .+++.-.+.+++||+.+ ++++.+....
T Consensus 136 v~~~~t~~~-~~~~~~~~~a~~~~~~G~~~~K~Kvg~--------------~~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIAD-PDFDADLERMRAMVPAGHTVFKMKTGV--------------KPHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEECC-SSHHHHHHHHHHHTTTTCCEEEEECSS--------------SCHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEccCC--------------CcHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 355556643 367777666666666699999998753 23455667888999875 6899999865
Q ss_pred Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.+ .+..++++.+++.|++.|-= | +.|-.++..+++++.. ++||
T Consensus 201 ~~~~~~A~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~ipI 245 (377)
T 3my9_A 201 ALTPFGAMKILRDVDAFRPTFIEQ-----------------P-----------------VPRRHLDAMAGFAAAL-DTPI 245 (377)
T ss_dssp CCCTTTHHHHHHHHHTTCCSCEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCE
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEC-----------------C-----------------CCccCHHHHHHHHHhC-CCCE
Confidence 44 47788999999998876621 1 1222367778888888 6999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
++..-+.+..|+.+++..| ++.||+--.-. .|..-..++
T Consensus 246 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-GGit~~~~i 285 (377)
T 3my9_A 246 LADESCFDAVDLMEVVRRQAADAISVKIMKC-GGLMKAQSL 285 (377)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEECCHHHH-TSHHHHHHH
T ss_pred EECCccCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHH
Confidence 9999999999999999865 89999866655 344434333
No 415
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.49 E-value=0.012 Score=68.00 Aligned_cols=32 Identities=41% Similarity=0.484 Sum_probs=29.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.+
T Consensus 7 dVlIVGaG~aGl~~A~~La~~G~~-v~viEr~~ 38 (535)
T 3ihg_A 7 DVLVVGAGLGGLSTAMFLARQGVR-VLVVERRP 38 (535)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEECSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 499999999999999999999986 99999764
No 416
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.47 E-value=0.01 Score=69.42 Aligned_cols=107 Identities=19% Similarity=0.213 Sum_probs=69.5
Q ss_pred cEEEEcCChhHHHHHHHHHHc------CCcEEEEEEeecCcc--------------------------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRC------GANKVLVVFRKGCTN-------------------------------------- 184 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~------G~~~Vtlv~r~~~~~-------------------------------------- 184 (842)
.|+|||||..|+-+|..|++. |.+ |+|+++.+...
T Consensus 37 DVvIVGaG~aGlaaA~~La~~~~~~~~G~~-V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 37 DVVIVGAGPAGLSAATRLKQLAAQHEKDLR-VCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCC-EEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCCc-EEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 499999999999999999998 876 99998764210
Q ss_pred ---------cc---C--C---------H-H----HHHHHHhcCcEEecCCCceEEEccC-CcEEEEEEEeecccCCCCee
Q psy16199 185 ---------IR---A--V---------P-E----EVQLAWEEKCEFLPFMSPVQVDVKD-NKIAGMQFNRTEQNEKGEWV 235 (842)
Q Consensus 185 ---------~~---~--~---------~-~----~~~~~~~~gV~i~~~~~v~~v~~~~-~~v~~V~~~~~~~~~~G~~~ 235 (842)
++ . . . . ..+.+.+.|+++++++.++++..++ +++.+|.+.+...+.+|...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 0 0 0 0 1123445699999999999987543 57777776532111222110
Q ss_pred ccCCceEEEECCEEEEccccC
Q psy16199 236 EDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 236 ~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
..-....++.+|.||.|.|..
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp EEEECCCEEECSEEEECCCTT
T ss_pred cccCCceEEECCEEEEeeCCC
Confidence 000001378999999999987
No 417
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=96.46 E-value=0.064 Score=58.69 Aligned_cols=144 Identities=8% Similarity=0.067 Sum_probs=103.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhc-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+-.++. ..+++++.+.++.+.+. |+..+-+.++... .+.-.+.+++||+.+ ++++.+...
T Consensus 129 v~~~~~~~-~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~--------------~~~d~~~v~avR~a~g~~~~l~vDan 193 (367)
T 3dg3_A 129 MRVSHMLG-FDDPVKMVAEAERIRETYGINTFKVKVGRRP--------------VQLDTAVVRALRERFGDAIELYVDGN 193 (367)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHHHHHHHCCCEEEEECCCSS--------------THHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEEec-CCCHHHHHHHHHHHHHhcCccEEEEeeCCCh--------------hhhHHHHHHHHHHHhCCCCEEEEECC
Confidence 45556664 34788888888877777 9999999875410 113356788888875 689999886
Q ss_pred CChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 641 PNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 641 p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..++ +..++++.+++.|++.|-= | +.+..+...+++++.. ++|
T Consensus 194 ~~~~~~~a~~~~~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iP 238 (367)
T 3dg3_A 194 RGWSAAESLRAMREMADLDLLFAEE-----------------L-----------------CPADDVLSRRRLVGQL-DMP 238 (367)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSCEES-----------------C-----------------SCTTSHHHHHHHHHHC-SSC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEC-----------------C-----------------CCcccHHHHHHHHHhC-CCC
Confidence 6554 6678888888888766530 1 1222366778888888 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
|++.+.+.+.+|+.+++..| ++.||+=-.-. |..-..++
T Consensus 239 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~--Git~~~~i 278 (367)
T 3dg3_A 239 FIADESVPTPADVTREVLGGSATAISIKTART--GFTGSTRV 278 (367)
T ss_dssp EEECTTCSSHHHHHHHHHHTSCSEEEECHHHH--TTHHHHHH
T ss_pred EEecCCcCCHHHHHHHHHcCCCCEEEeehhhh--hHHHHHHH
Confidence 99999999999999999976 89999865544 54444343
No 418
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.45 E-value=0.0062 Score=64.52 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=57.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEE-EEeecC----------ccccCCH-----HH-H----HHHHhcCcEEecCCC
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLV-VFRKGC----------TNIRAVP-----EE-V----QLAWEEKCEFLPFMS 207 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtl-v~r~~~----------~~~~~~~-----~~-~----~~~~~~gV~i~~~~~ 207 (842)
+|+|||||+.|+.+|..|.+.|.+ |++ +++... ...+..+ .+ . ..+.+.+++++.+ .
T Consensus 6 ~vvIIG~G~aGl~aA~~l~~~g~~-v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 83 (315)
T 3r9u_A 6 DVAIIGGGPAGLSAGLYATRGGLK-NVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV-G 83 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCS-CEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-C
T ss_pred eEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-E
Confidence 499999999999999999999976 999 886321 0011111 22 2 2234568888776 6
Q ss_pred ceEEEccC--CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 208 PVQVDVKD--NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 208 v~~v~~~~--~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+..+ .++ +... +.+ .++. ++.+|.||+|+|..|
T Consensus 84 v~~i-~~~~~~~~~-v~~-------------~~~~--~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 84 VEQI-LKNSDGSFT-IKL-------------EGGK--TELAKAVIVCTGSAP 118 (315)
T ss_dssp EEEE-EECTTSCEE-EEE-------------TTSC--EEEEEEEEECCCEEE
T ss_pred EEEE-ecCCCCcEE-EEE-------------ecCC--EEEeCEEEEeeCCCC
Confidence 6666 222 2221 111 1222 789999999999874
No 419
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=96.45 E-value=0.076 Score=59.49 Aligned_cols=160 Identities=11% Similarity=0.038 Sum_probs=110.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCC------------CCC-C-----------CcccC--CCCH
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGM------------GER-G-----------MGLAC--GQDP 617 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~------------~~~-~-----------~G~~~--~~~~ 617 (842)
.|+.+++. +.+++++.+.++.+.+.|+.++-+.++..... ... + -|..+ ..+.
T Consensus 145 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (440)
T 3t6c_A 145 IALYVHTD-GADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYA 223 (440)
T ss_dssp EEEEEEEC-CSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHH
T ss_pred eEEEEECC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhH
Confidence 45666664 46899999988888778999999988642100 000 0 00000 0014
Q ss_pred HHHHHHHHHHHhhC--CccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCC
Q psy16199 618 EMVRNISLWVRSSV--KIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693 (842)
Q Consensus 618 ~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG 693 (842)
+...+.+++||+.+ ++++.|.....++ +..++++.+++.|++.|-= |
T Consensus 224 ~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe-----------------P------------ 274 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLED-----------------P------------ 274 (440)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC-----------------S------------
T ss_pred HHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEEC-----------------C------------
Confidence 56678899999986 6899999876554 6778889999988877631 1
Q ss_pred CCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 694 VSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 694 ~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
+.|-.++..+++++.. ++||++...+.+..|+.+++..| ++.||+--.-. .|..-..++.
T Consensus 275 -----~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~-GGit~~~~ia 335 (440)
T 3t6c_A 275 -----VAPENTEWLKMLRQQS-STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSI-GGITPAKKIA 335 (440)
T ss_dssp -----SCGGGGGGHHHHHHHC-CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG-TSHHHHHHHH
T ss_pred -----CChhhHHHHHHHHhhc-CCCEEeCcccCCHHHHHHHHHcCCccceeechhhh-CCHHHHHHHH
Confidence 1122244567788887 69999999999999999999976 89999877666 4444444443
No 420
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.45 E-value=0.0011 Score=75.04 Aligned_cols=83 Identities=20% Similarity=0.175 Sum_probs=57.4
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc------cccC---CHH----HHHHHHhcCcEEecCCCceEEEcc
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT------NIRA---VPE----EVQLAWEEKCEFLPFMSPVQVDVK 214 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~------~~~~---~~~----~~~~~~~~gV~i~~~~~v~~v~~~ 214 (842)
.+|+|||||+.|+.+|..|.+.|.+ |+|+++.+.. .+|. ... ..+.+.+.||++++++.+..
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~---- 197 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAKGYE-VHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR---- 197 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCC-EEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT----
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCe-EEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc----
Confidence 3499999999999999999999986 9999987532 1222 122 22345677999998876520
Q ss_pred CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccC
Q psy16199 215 DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGST 256 (842)
Q Consensus 215 ~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~ 256 (842)
. +.+.+ ..+.+|.||+|+|..
T Consensus 198 --~---v~~~~----------------~~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 --D---ASLPE----------------LRRKHVAVLVATGVY 218 (456)
T ss_dssp --T---BCHHH----------------HHSSCSEEEECCCCC
T ss_pred --E---EEhhH----------------hHhhCCEEEEecCCC
Confidence 0 11111 124699999999986
No 421
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.43 E-value=0.0043 Score=66.12 Aligned_cols=90 Identities=16% Similarity=0.194 Sum_probs=60.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc----------cccC-----CHHH-H----HHHHhcCcEEecCCCc
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT----------NIRA-----VPEE-V----QLAWEEKCEFLPFMSP 208 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~----------~~~~-----~~~~-~----~~~~~~gV~i~~~~~v 208 (842)
+|+|||||+.|+.+|..|.+.|.+ |+++++.... ..+. ...+ . ..+.+.+++++.++ +
T Consensus 7 ~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 7 KLLILGSGPAGYTAAVYAARANLQ-PVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-CEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-EEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 499999999999999999999976 9999864210 0111 1112 1 22445689998875 7
Q ss_pred eEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+...++.+. + +. ++ .++.+|.||+|+|..|
T Consensus 85 ~~i~~~~~~~~-v-~~-------------~~--~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 85 NKVDLQNRPFR-L-NG-------------DN--GEYTCDALIIATGASA 116 (320)
T ss_dssp EEEECSSSSEE-E-EE-------------SS--CEEEEEEEEECCCEEE
T ss_pred eEEEecCCEEE-E-Ee-------------CC--CEEEcCEEEECCCCCc
Confidence 77764333332 2 22 12 2688999999999874
No 422
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.40 E-value=0.0045 Score=71.36 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=62.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc-c--------c---c-CCHHHH-----HHHHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT-N--------I---R-AVPEEV-----QLAWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~-~--------~---~-~~~~~~-----~~~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||+.|+.+|..|++.|.+ |++++++.-. . + + .....+ ..+.+.|++++.++.++.
T Consensus 214 dVvIIGgG~AGl~aA~~la~~G~~-v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~ 292 (521)
T 1hyu_A 214 DVLIVGSGPAGAAAAVYSARKGIR-TGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASK 292 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEE
T ss_pred cEEEECCcHHHHHHHHHHHhCCCe-EEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEE
Confidence 399999999999999999999975 9999753100 0 0 0 111121 224466999999999988
Q ss_pred EEcc--CCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVK--DNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~--~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+... ++....|.+. +| .++.+|.||+|+|..|
T Consensus 293 i~~~~~~~~~~~V~~~-------------~g--~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 293 LVPAATEGGLHQIETA-------------SG--AVLKARSIIIATGAKW 326 (521)
T ss_dssp EECCSSTTSCEEEEET-------------TS--CEEEEEEEEECCCEEE
T ss_pred EEeccCCCceEEEEEC-------------CC--CEEEcCEEEECCCCCc
Confidence 8631 1222224332 22 2689999999999874
No 423
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.39 E-value=0.027 Score=56.62 Aligned_cols=146 Identities=14% Similarity=0.180 Sum_probs=94.3
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCC-CCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEE--Eec
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCP-HGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFV--KLT 640 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP-~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~v--Kl~ 640 (842)
.+||.-+-.+.-+.-...+++.+.+. +|++.+|-... .. .++.. + ... -|++ .++
T Consensus 51 ~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~~~---------------~~~~~-~---~~~--~v~vLts~s 108 (215)
T 3ve9_A 51 GIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGVEG---------------SLASL-S---QRV--DLFLVLSMS 108 (215)
T ss_dssp SEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCTTT---------------THHHH-H---HHS--EEEEECCCS
T ss_pred CcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCcHH---------------HHHhH-h---cCC--CEEEEEecC
Confidence 57888777654455556666777788 99999985332 11 11111 1 111 1333 221
Q ss_pred -CC--hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 641 -PN--ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 641 -p~--~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
++ -+.+..+++.+.++|++|++++.| . ..-++.+++.+++
T Consensus 109 ~~~~~~~~v~~~a~~a~~~G~~GvV~sat---------------------------------~---~~e~~~ir~~~~~- 151 (215)
T 3ve9_A 109 HPGWNDAFYPYLREVARRVNPKGFVAPAT---------------------------------R---PSMISRVKGDFPD- 151 (215)
T ss_dssp STTCCGGGHHHHHHHHHHHCCSEEECCTT---------------------------------S---HHHHHHHHHHCTT-
T ss_pred CcchHHHHHHHHHHHHHHcCCCceeeCCC---------------------------------C---HHHHHHHHHhCCC-
Confidence 11 123678999999999999998433 1 2234567777777
Q ss_pred cEEEecCcCC-HHHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHHHHHH
Q psy16199 718 PILGIGGIDS-ADVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQTLLY 768 (842)
Q Consensus 718 pIi~~GGI~t-~~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~~~m~ 768 (842)
.++..+||.. +.+..+++.+||+.+-+||++... +| ..++++++++++++.
T Consensus 152 f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 152 KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVLS 205 (215)
T ss_dssp SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHC-
T ss_pred cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 7888999973 226778889999999999999954 24 456777777776543
No 424
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=96.37 E-value=0.047 Score=59.89 Aligned_cols=127 Identities=18% Similarity=0.130 Sum_probs=96.6
Q ss_pred CCHhHHHHHHHHHhhc-CcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCChh--cHHH
Q psy16199 574 YNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNIT--NITD 648 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~a-gaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~ 648 (842)
.+++++.+.++...+. |+..+-+.++++ +++.-.+.+++||+.+ ++++.+.....++ +..+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~ 215 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHD--------------DPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQR 215 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCS--------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCC--------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHH
Confidence 3788888888877777 999999998654 3455678899999987 6899999876544 6667
Q ss_pred HHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCH
Q psy16199 649 IAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSA 728 (842)
Q Consensus 649 ~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~ 728 (842)
+++.+++.|++.|- .| +.+-.++..+++++.. ++||++...+.+.
T Consensus 216 ~~~~l~~~~i~~iE-----------------qP-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~ 260 (372)
T 3tj4_A 216 FCAAAKDLDIYWFE-----------------EP-----------------LWYDDVTSHARLARNT-SIPIALGEQLYTV 260 (372)
T ss_dssp HHHHTTTSCEEEEE-----------------SC-----------------SCTTCHHHHHHHHHHC-SSCEEECTTCCSH
T ss_pred HHHHHhhcCCCEEE-----------------CC-----------------CCchhHHHHHHHHhhc-CCCEEeCCCccCH
Confidence 88888877655442 01 1222367778888888 6999999999999
Q ss_pred HHHHHHHHhC-CCEEEEehhhh
Q psy16199 729 DVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 729 ~da~~~l~~G-A~~Vqv~ta~l 749 (842)
+|+.+++..| ++.||+--.-.
T Consensus 261 ~~~~~~i~~~~~d~v~~k~~~~ 282 (372)
T 3tj4_A 261 DAFRSFIDAGAVAYVQPDVTRL 282 (372)
T ss_dssp HHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHHHcCCCCEEEeCcccc
Confidence 9999999976 78888754444
No 425
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.37 E-value=0.0085 Score=70.06 Aligned_cols=30 Identities=33% Similarity=0.551 Sum_probs=28.6
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
|+|||||..|+++|..|++.|.+ |+|+++.
T Consensus 24 VIVIGgG~AGl~AAlaLAr~G~k-VlLIEk~ 53 (641)
T 3cp8_A 24 VIVVGAGHAGCEAALAVARGGLH-CLLITSD 53 (641)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred EEEECccHHHHHHHHHHHHCCCc-EEEEEec
Confidence 99999999999999999999986 9999986
No 426
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.37 E-value=0.047 Score=59.00 Aligned_cols=129 Identities=11% Similarity=0.104 Sum_probs=85.7
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI 643 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~ 643 (842)
.||+.+=|.+.+.+++...+.. .-|+..+ ...+++.+.++++.+++ .++|+.+.+...
T Consensus 47 ~Pi~~a~mag~s~~~la~a~~~--~gg~g~~------------------~~~~~~~~~~~i~~~~~-~g~~v~v~~g~~- 104 (336)
T 1ypf_A 47 LPVVPANMQTIIDERIATYLAE--NNYFYIM------------------HRFQPEKRISFIRDMQS-RGLIASISVGVK- 104 (336)
T ss_dssp SSEEECSSTTTCCHHHHHHHHH--TTCCCCC------------------CCSSGGGHHHHHHHHHH-TTCCCEEEECCS-
T ss_pred CcEEECCCCCCChHHHHHHHHh--CCCEEEe------------------cCCCCHHHHHHHHHHHh-cCCeEEEeCCCC-
Confidence 6999888877777777653322 1122211 11233445666776664 367888886433
Q ss_pred hcHHHHHHHHHHCC--CCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE
Q psy16199 644 TNITDIAKAAYEGK--ADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG 721 (842)
Q Consensus 644 ~~~~~~a~~~~~~G--~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~ 721 (842)
.+..+.++.+.+.| ++.|.+ |.. .| ..+..++.++++++.++. |++.
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i-~~~-----------------------~G------~~~~~~~~i~~lr~~~~~-~~vi 153 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITI-DIA-----------------------HG------HSNAVINMIQHIKKHLPE-SFVI 153 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEE-ECS-----------------------SC------CSHHHHHHHHHHHHHCTT-SEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEE-ECC-----------------------CC------CcHHHHHHHHHHHHhCCC-CEEE
Confidence 34456788899999 898866 320 01 134568899999999854 4444
Q ss_pred ecCcCCHHHHHHHHHhCCCEEEEe
Q psy16199 722 IGGIDSADVALQFIQAGAHAVQIC 745 (842)
Q Consensus 722 ~GGI~t~~da~~~l~~GA~~Vqv~ 745 (842)
.|+|.+.++|.+++++|||+|.++
T Consensus 154 ~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 154 AGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ECCcCCHHHHHHHHHcCCCEEEEe
Confidence 577999999999999999999993
No 427
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.36 E-value=0.016 Score=66.35 Aligned_cols=94 Identities=18% Similarity=0.233 Sum_probs=64.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc------------------------c-------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN------------------------I------------------- 185 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~------------------------~------------------- 185 (842)
+|+|||||.+|+-+|..|++.|.+ |+|+++.+... +
T Consensus 14 dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 92 (499)
T 2qa2_A 14 SVIVVGAGPAGLMLAGELRLGGVD-VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFG 92 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecccc
Confidence 399999999999999999999986 99999764210 0
Q ss_pred --c-CC-------HHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEE
Q psy16199 186 --R-AV-------PEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYII 250 (842)
Q Consensus 186 --~-~~-------~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi 250 (842)
. .. ... .+.+.+.|++++.++.++.+..+++.++ |++.+. +| ..++.+|.||
T Consensus 93 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~-----------~g-~~~~~a~~vV 159 (499)
T 2qa2_A 93 VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVV-VEVEGP-----------DG-PRSLTTRYVV 159 (499)
T ss_dssp GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE-EEEECS-----------SC-EEEEEEEEEE
T ss_pred cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEEcC-----------CC-cEEEEeCEEE
Confidence 0 00 001 1223345888888888888865444444 555432 23 3579999999
Q ss_pred EccccC
Q psy16199 251 SAFGST 256 (842)
Q Consensus 251 ~a~G~~ 256 (842)
.|.|..
T Consensus 160 gADG~~ 165 (499)
T 2qa2_A 160 GCDGGR 165 (499)
T ss_dssp ECCCTT
T ss_pred EccCcc
Confidence 999976
No 428
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.36 E-value=0.034 Score=63.79 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=47.5
Q ss_pred cchHHHHHHHHhhC-----CCCcEEEecCcCCHHHHHHHHH--------hCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 701 PMGLKAVSSIAKMF-----PNFPILGIGGIDSADVALQFIQ--------AGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 701 p~al~~v~~i~~~~-----~~ipIi~~GGI~t~~da~~~l~--------~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
|..++.++++.+.+ .++|+++.||| +.+++.+.+. +||++|.|.|+++.. ++ +....+.|.+.+
T Consensus 153 ~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a-~d-p~~a~~~l~~~~ 229 (540)
T 3nl6_A 153 PMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIAS-LD-AAKSTKILRGLI 229 (540)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTC-TT-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcC-CC-HHHHHHHHHHHH
Confidence 34567777766542 36999999999 8899999998 799999999999953 33 233334444444
Q ss_pred Hh
Q psy16199 768 YL 769 (842)
Q Consensus 768 ~~ 769 (842)
..
T Consensus 230 ~~ 231 (540)
T 3nl6_A 230 DK 231 (540)
T ss_dssp HC
T ss_pred Hh
Confidence 33
No 429
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.35 E-value=0.0063 Score=64.61 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=28.4
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
|+|||||+.|+.+|..|++.|.+ |+++++..
T Consensus 7 vvIIG~GpAGl~AA~~la~~g~~-v~liE~~~ 37 (314)
T 4a5l_A 7 VVIIGSGPAAHTAAIYLGRSSLK-PVMYEGFM 37 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-CEEECCSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEecCC
Confidence 99999999999999999999975 99998753
No 430
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.32 E-value=0.0071 Score=65.99 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=29.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+.+|..|++.|.+ |+|+++..
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~-V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLN-VLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCC-EEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEecCC
Confidence 399999999999999999999975 99999764
No 431
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.31 E-value=0.0084 Score=69.46 Aligned_cols=32 Identities=28% Similarity=0.259 Sum_probs=29.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+.+|..|.+.|.+ |+|+++++
T Consensus 11 dVvIIGaG~aGl~aA~~L~~~g~~-v~iiE~~~ 42 (545)
T 3uox_A 11 DAVVIGAGVTGIYQAFLINQAGMK-VLGIEAGE 42 (545)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 499999999999999999999985 99999874
No 432
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.30 E-value=0.053 Score=55.09 Aligned_cols=135 Identities=14% Similarity=0.079 Sum_probs=81.8
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecC-
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTP- 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p- 641 (842)
.+++.-+-....++.....++.+.++|+|++.+|..+ ..+.+...++.+++.- .+.++..++.
T Consensus 65 ~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~---------------G~~~l~~~~~~~~~~g~~v~vLt~~s~~ 129 (228)
T 3m47_A 65 CRIIADFKVADIPETNEKICRATFKAGADAIIVHGFP---------------GADSVRACLNVAEEMGREVFLLTEMSHP 129 (228)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT---------------CHHHHHHHHHHHHHHTCEEEEECCCCSG
T ss_pred CeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccC---------------CHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 4566666554345555566666677899999998422 1345666667666532 2333334433
Q ss_pred Ch-----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCC
Q psy16199 642 NI-----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN 716 (842)
Q Consensus 642 ~~-----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ 716 (842)
+. +....+++.+.+.|++|++++.| . .+.++++++.+++
T Consensus 130 ~~~~~~~~~~~~~a~~a~~~G~~GvV~~at---------------------------------~---~~e~~~ir~~~~~ 173 (228)
T 3m47_A 130 GAEMFIQGAADEIARMGVDLGVKNYVGPST---------------------------------R---PERLSRLREIIGQ 173 (228)
T ss_dssp GGGTTHHHHHHHHHHHHHHTTCCEEECCSS---------------------------------C---HHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHHHHHHHHhCCcEEEECCC---------------------------------C---hHHHHHHHHhcCC
Confidence 11 12357888999999999887322 1 2345567776654
Q ss_pred -CcEEEecCcCCH-HHHHHHHHhCCCEEEEehhhhcc
Q psy16199 717 -FPILGIGGIDSA-DVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 717 -ipIi~~GGI~t~-~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+++ .++||.-. .+. +++.+||+.+.+||+++..
T Consensus 174 ~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a 208 (228)
T 3m47_A 174 DSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA 208 (228)
T ss_dssp SSEE-EECC----------CGGGTCSEEEECHHHHTS
T ss_pred CCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC
Confidence 544 78888532 267 8889999999999998843
No 433
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.29 E-value=0.016 Score=66.31 Aligned_cols=94 Identities=19% Similarity=0.186 Sum_probs=65.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc------------------------cc------------------
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN------------------------IR------------------ 186 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~------------------------~~------------------ 186 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.+... +.
T Consensus 13 dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 91 (500)
T 2qa1_A 13 AVIVVGAGPAGMMLAGELRLAGVE-VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFG 91 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccc
Confidence 399999999999999999999986 99999764210 00
Q ss_pred --C--C-------HHH-----HHHHHhcCcEEecCCCceEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEE
Q psy16199 187 --A--V-------PEE-----VQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYII 250 (842)
Q Consensus 187 --~--~-------~~~-----~~~~~~~gV~i~~~~~v~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi 250 (842)
. . ... .+.+.+.|++++.++.++.+..+++.++ |++.+. +| ..++.+|.||
T Consensus 92 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~-----------~g-~~~~~a~~vV 158 (500)
T 2qa1_A 92 VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVRGP-----------EG-KHTLRAAYLV 158 (500)
T ss_dssp GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEEET-----------TE-EEEEEESEEE
T ss_pred cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEE-EEEEcC-----------CC-CEEEEeCEEE
Confidence 0 0 001 1223455899999999988875555554 555542 23 3578999999
Q ss_pred EccccC
Q psy16199 251 SAFGST 256 (842)
Q Consensus 251 ~a~G~~ 256 (842)
.|.|..
T Consensus 159 gADG~~ 164 (500)
T 2qa1_A 159 GCDGGR 164 (500)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999976
No 434
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.29 E-value=0.007 Score=68.96 Aligned_cols=95 Identities=14% Similarity=0.171 Sum_probs=63.6
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeecCcc-----cc-------CCHHH-----HHHHHh-cCcEEecCCCc
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKGCTN-----IR-------AVPEE-----VQLAWE-EKCEFLPFMSP 208 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~~~~-----~~-------~~~~~-----~~~~~~-~gV~i~~~~~v 208 (842)
+|+|||||..|+.+|..|.+. |. +|+|+++.+... ++ ..... .+.+.+ .|++++.++.+
T Consensus 38 dvvIIG~G~aGl~aA~~l~~~~~g~-~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 38 NYVIIGGDAAGMSAAMQIVRNDENA-NVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCC-cEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 599999999999999999987 65 599999875321 10 00111 223333 48999988888
Q ss_pred eEEEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+..++.. +.+.+. .+|+..++.+|.+|+|+|.+|
T Consensus 117 ~~i~~~~~~---v~v~~~----------~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 117 TKVDTEKKI---VYAEHT----------KTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp EEEETTTTE---EEEEET----------TTCCEEEEECSEEEECCCEEE
T ss_pred EEEECCCCE---EEEEEc----------CCCceEEEEcCEEEECCCCcc
Confidence 888643332 233321 023334789999999999884
No 435
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.28 E-value=0.0097 Score=69.01 Aligned_cols=90 Identities=14% Similarity=0.127 Sum_probs=60.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc--------------cc----------------------CCHHHH
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN--------------IR----------------------AVPEEV 192 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~--------------~~----------------------~~~~~~ 192 (842)
+|+|||||.+|+.+|..|.+.|.+ |+|+++.+... .+ ....++
T Consensus 23 dVvIIGaG~aGl~aA~~L~~~G~~-v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 23 DVVVVGAGIAGLYAIHRFRSQGLT-VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CEEEECchHHHHHHHHHHHhCCCC-EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 499999999999999999999985 99999854110 00 001121
Q ss_pred -H----HHHhcCc--EEecCCCceEEEccC-CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccc
Q psy16199 193 -Q----LAWEEKC--EFLPFMSPVQVDVKD-NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFG 254 (842)
Q Consensus 193 -~----~~~~~gV--~i~~~~~v~~v~~~~-~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G 254 (842)
. .+.+.++ .+++++.|+++...+ .....|++. +|+ ++.+|.||+|+|
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~-------------~G~--~i~ad~lV~AtG 156 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD-------------RGD--EVSARFLVVAAG 156 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEET-------------TCC--EEEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEEC-------------CCC--EEEeCEEEECcC
Confidence 1 1334566 788888888886322 223334433 222 689999999999
No 436
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.27 E-value=0.0097 Score=65.84 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=29.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+.+|..|++.|.+ |+|+++.+
T Consensus 28 dV~IVGaG~aGl~~A~~L~~~G~~-v~v~E~~~ 59 (398)
T 2xdo_A 28 NVAIIGGGPVGLTMAKLLQQNGID-VSVYERDN 59 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCE-EEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 499999999999999999999975 99999875
No 437
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.26 E-value=0.16 Score=51.29 Aligned_cols=137 Identities=20% Similarity=0.215 Sum_probs=78.8
Q ss_pred HHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEe
Q psy16199 585 KTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAI 664 (842)
Q Consensus 585 ~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~ 664 (842)
++.+.|||++-|+.|.- . ..+..+.+.++...+. ++-+++=+. +..+. +.+...+.+ |+..
T Consensus 80 ~l~~~Ga~~VllghseR------R------~~~~e~~~k~~~A~~~-GL~~ivcVg----e~~e~-~~~~~~~~~-iIay 140 (226)
T 1w0m_A 80 NIKEAGGSGVILNHSEA------P------LKLNDLARLVAKAKSL-GLDVVVCAP----DPRTS-LAAAALGPH-AVAV 140 (226)
T ss_dssp HHHHHTCCEEEECCTTS------C------CBHHHHHHHHHHHHHT-TCEEEEEES----SHHHH-HHHHHTCCS-EEEE
T ss_pred HHHHcCCCEEEEeeeec------c------CCHHHHHHHHHHHHHC-CCEEEEEeC----CHHHH-HHHhcCCCC-EEEE
Confidence 34556999999985442 1 2334456666665543 443334332 22333 344556665 4444
Q ss_pred cCCCccccCCCCCCCCCcccCCCccccCCCCCCcc---ccc-hHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCC
Q psy16199 665 NTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT---RPM-GLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAH 740 (842)
Q Consensus 665 nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~---~p~-al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~ 740 (842)
|. +...| +|.++ .|- .-+..+.+++..++++|+.-|||.+.+|+..+...|+|
T Consensus 141 ep---------------------~waiG--tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giD 197 (226)
T 1w0m_A 141 EP---------------------PELIG--TGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTR 197 (226)
T ss_dssp CC---------------------GGGTT--TSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred cC---------------------hhhhc--cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCC
Confidence 42 11112 23111 222 23333334444446999999999999999999999999
Q ss_pred EEEEehhhhccCchhHHHHHHHHHH
Q psy16199 741 AVQICSAVQNQDFTVVDDYITGLQT 765 (842)
Q Consensus 741 ~Vqv~ta~l~~gp~~~~~i~~~l~~ 765 (842)
++-||+++|.. .+ +.++.++|..
T Consensus 198 G~LVG~a~l~a-~~-~~~~i~~l~~ 220 (226)
T 1w0m_A 198 GVLLASAAVKA-KD-PYAKIVELAK 220 (226)
T ss_dssp EEEECHHHHTC-SS-HHHHHHHHHH
T ss_pred EEEECHHHHCC-cC-HHHHHHHHHH
Confidence 99999999953 33 3344444433
No 438
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=96.25 E-value=0.073 Score=58.23 Aligned_cols=136 Identities=11% Similarity=0.079 Sum_probs=102.2
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCChh--cHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNIT--NITDI 649 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~~ 649 (842)
.+++++.+.++...+.|+..+-+.+++ +++.-.+.+++||+.+ ++++.+.....++ +..++
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~---------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~ 203 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGG---------------SKELDVERIRMIREAAGDSITLRIDANQGWSVETAIET 203 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHH
Confidence 478888888887777899999998743 3566678899999886 6899999866554 67788
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|++.|-= | +.+..++..+++++.. ++||++...+.+.+
T Consensus 204 ~~~l~~~~i~~iEq-----------------P-----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~ 248 (368)
T 3q45_A 204 LTLLEPYNIQHCEE-----------------P-----------------VSRNLYTALPKIRQAC-RIPIMADESCCNSF 248 (368)
T ss_dssp HHHHGGGCCSCEEC-----------------C-----------------BCGGGGGGHHHHHHTC-SSCEEESTTCCSHH
T ss_pred HHHHhhcCCCEEEC-----------------C-----------------CChhHHHHHHHHHhhC-CCCEEEcCCcCCHH
Confidence 99999988776631 1 1222245566788887 69999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 730 VALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
|+.+++..| ++.||+--... .|..-..++.
T Consensus 249 ~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i~ 279 (368)
T 3q45_A 249 DAERLIQIQACDSFNLKLSKS-AGITNALNII 279 (368)
T ss_dssp HHHHHHHTTCCSEEEECTTTT-TSHHHHHHHH
T ss_pred HHHHHHHcCCCCeEEechhhc-CCHHHHHHHH
Confidence 999999965 89999877666 4554444443
No 439
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.24 E-value=0.011 Score=67.60 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=29.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.+
T Consensus 5 DVvIIGgGi~G~~~A~~La~~G~~-V~llE~~~ 36 (501)
T 2qcu_A 5 DLIVIGGGINGAGIAADAAGRGLS-VLMLEAQD 36 (501)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCC-EEEEECCC
Confidence 399999999999999999999986 99998753
No 440
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.23 E-value=0.0077 Score=65.10 Aligned_cols=31 Identities=29% Similarity=0.280 Sum_probs=28.0
Q ss_pred cEEEEcCChhHHHHHHHHHH---cCCcEEEEEEee
Q psy16199 149 TVIVLGAGDTAFDCATSALR---CGANKVLVVFRK 180 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~---~G~~~Vtlv~r~ 180 (842)
+|+|||||.+|+-+|..|.+ .|. +|+|++++
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~-~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCE-EEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCc-eEEEEECC
Confidence 49999999999999999999 886 59999875
No 441
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.21 E-value=0.007 Score=70.02 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=60.6
Q ss_pred cEEEEcCChhHHHHHHHHH-HcCCcEEEEEEeecCcc-------ccC--------------C---------------HHH
Q psy16199 149 TVIVLGAGDTAFDCATSAL-RCGANKVLVVFRKGCTN-------IRA--------------V---------------PEE 191 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~-~~G~~~Vtlv~r~~~~~-------~~~--------------~---------------~~~ 191 (842)
+|+|||||.+|+.+|..|. +.|.+ |+|+++.+... .|. . ..+
T Consensus 10 dVvIIGaG~aGl~aA~~L~~~~G~~-v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 10 DAVVIGAGFGGIYAVHKLHHELGLT-TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCC-EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCC-EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 4999999999999999999 88874 99999864110 000 0 111
Q ss_pred H-----HHHHhcCc--EEecCCCceEEEccCC-cEEEEEEEeecccCCCCeeccCCceEEEECCEEEEcccc
Q psy16199 192 V-----QLAWEEKC--EFLPFMSPVQVDVKDN-KIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGS 255 (842)
Q Consensus 192 ~-----~~~~~~gV--~i~~~~~v~~v~~~~~-~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~ 255 (842)
+ ..+.+.|+ .+++++.|+++...+. ....|++. +|+ ++.+|.||+|+|.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~-------------~G~--~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTD-------------HGE--VYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEET-------------TSC--EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEc-------------CCC--EEEeCEEEECCcc
Confidence 1 12334577 7888888888864222 23334433 222 6899999999995
No 442
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.20 E-value=0.079 Score=55.95 Aligned_cols=151 Identities=16% Similarity=0.152 Sum_probs=94.0
Q ss_pred HHHHHhhcCcCEEEEec-------cCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh---cHHHHHH
Q psy16199 582 LSKKTEKAGADALELNL-------SCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT---NITDIAK 651 (842)
Q Consensus 582 ~a~~~~~agaD~ielN~-------scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~---~~~~~a~ 651 (842)
.|+.++++|+|+|=+.= +-|.+ ..-..+.+...++.|.+.+++||++-+.-.+. ++.+.++
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~---------~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~ 111 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDL---------GIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAV 111 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSS---------SCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCC---------CcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHH
Confidence 45666778999998852 23321 12457778888888888889999999864443 5667788
Q ss_pred HHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccch--HHHHHHHHhhCCCCcEEEecCcC---
Q psy16199 652 AAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMG--LKAVSSIAKMFPNFPILGIGGID--- 726 (842)
Q Consensus 652 ~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~a--l~~v~~i~~~~~~ipIi~~GGI~--- 726 (842)
.+.++|+++|.+=.... ....|-+.|+.+.|.. .+.|+.++++-+++.|++=-.-.
T Consensus 112 ~l~~aGaagv~iED~~~-------------------~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~ 172 (305)
T 3ih1_A 112 EMVEAKVAAVQIEDQQL-------------------PKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVE 172 (305)
T ss_dssp HHHHTTCSEEEEECBCS-------------------SCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHH
T ss_pred HHHHhCCcEEEECCCCC-------------------CcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeecccccc
Confidence 89999999999833211 1124445677777754 45555555663334455433321
Q ss_pred ----CHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 727 ----SADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 727 ----t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
.-+++..+.++|||+|.+=.. ..+..++++.+.+
T Consensus 173 g~~~ai~Ra~ay~eAGAD~i~~e~~---~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 173 GLDEAIERANAYVKAGADAIFPEAL---QSEEEFRLFNSKV 210 (305)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEETTC---CSHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC---CCHHHHHHHHHHc
Confidence 124455666799999976331 2244555554443
No 443
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=96.17 E-value=0.16 Score=55.72 Aligned_cols=144 Identities=15% Similarity=0.141 Sum_probs=104.6
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-+++.. .+++++.+.++...+.|+..+-+.++ .+++.-.+.+++||+.+ ++++.+....
T Consensus 132 v~~y~t~g~-~~~e~~~~~a~~~~~~Gf~~~KlK~g---------------~~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 132 IVTDVSISC-GNVAETIQNIQNGVEANFTAIKVKTG---------------ADFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EEBCEEECC-CCHHHHHHHHHHHHHTTCCEEEEECS---------------SCHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEEecC-CCHHHHHHHHHHHHHcCCCEEeeecC---------------CCHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 455566643 47888888888777779999999864 24666778899999987 5899998766
Q ss_pred Chh--cHHHHHHHHHH--CCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 642 NIT--NITDIAKAAYE--GKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~--~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
.++ +..++++.+++ .++..|- .| +.+..++..+++++.. ++
T Consensus 196 ~w~~~~A~~~~~~l~~~~~~l~~iE-----------------eP-----------------~~~~d~~~~~~l~~~~-~i 240 (379)
T 3r0u_A 196 GWNLAQTKQFIEEINKYSLNVEIIE-----------------QP-----------------VKYYDIKAMAEITKFS-NI 240 (379)
T ss_dssp CCCHHHHHHHHHHHHTSCCCEEEEE-----------------CC-----------------SCTTCHHHHHHHHHHC-SS
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEE-----------------CC-----------------CCcccHHHHHHHHhcC-CC
Confidence 444 77788999998 4444331 01 1222367788888888 69
Q ss_pred cEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 718 PILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
||++..-+.+..|+.+++..| ++.||+--... .|..-..++
T Consensus 241 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~-GGi~~~~~i 282 (379)
T 3r0u_A 241 PVVADESVFDAKDAERVIDEQACNMINIKLAKT-GGILEAQKI 282 (379)
T ss_dssp CEEESTTCSSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHH
T ss_pred CEEeCCccCCHHHHHHHHHcCCCCEEEECcccc-CCHHHHHHH
Confidence 999999999999999999976 79999866655 344333333
No 444
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=96.16 E-value=0.21 Score=54.97 Aligned_cols=145 Identities=12% Similarity=0.121 Sum_probs=104.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~ 642 (842)
.|+-+++.. .++++..+.++...+.|+..+-+.++. .+++.-.+.+++||+.+ ++++.+.....
T Consensus 138 v~~~~t~~~-~~~~~~~~~a~~~~~~G~~~~K~Kvg~--------------~~~~~d~~~v~avR~a~~~~~l~vDan~~ 202 (385)
T 3i6e_A 138 IPLSCSIAN-PDFDADIALMERLRADGVGLIKLKTGF--------------RDHAFDIMRLELIARDFPEFRVRVDYNQG 202 (385)
T ss_dssp EEBEEEECC-SSHHHHHHHHHHHHHHTCCEEEEECSS--------------SCHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eEEEEEcCC-CCHHHHHHHHHHHHHcCCCEEEEecCC--------------CCHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 466666643 367776666666556699999998753 23455567888888886 67899988664
Q ss_pred h--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEE
Q psy16199 643 I--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPIL 720 (842)
Q Consensus 643 ~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi 720 (842)
+ .+..++++.+++.|++.|-= | +.|..+...+++++.. ++||+
T Consensus 203 ~~~~~A~~~~~~L~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa 247 (385)
T 3i6e_A 203 LEIDEAVPRVLDVAQFQPDFIEQ-----------------P-----------------VRAHHFELMARLRGLT-DVPLL 247 (385)
T ss_dssp CCGGGHHHHHHHHHTTCCSCEEC-----------------C-----------------SCTTCHHHHHHHHTTC-SSCEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEC-----------------C-----------------CCcccHHHHHHHHHhC-CCCEE
Confidence 4 47788999999988776521 1 1222367778888887 69999
Q ss_pred EecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 721 GIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 721 ~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
+..-+.+..|+.+++..| ++.||+--.-. .|..-..++
T Consensus 248 ~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i 286 (385)
T 3i6e_A 248 ADESVYGPEDMVRAAHEGICDGVSIKIMKS-GGLTRAQTV 286 (385)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHH
Confidence 999999999999999865 89999876665 344433333
No 445
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=96.16 E-value=0.04 Score=56.69 Aligned_cols=133 Identities=14% Similarity=0.108 Sum_probs=79.2
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCC-cc-EE-EEecC
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVK-IP-FF-VKLTP 641 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~-~P-v~-vKl~p 641 (842)
+++.-+-.+..++....+++.+.++|||+|.+|.... .+.+...++.+++.-. .| ++ |...+
T Consensus 67 ~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~g---------------~~~l~~~~~~~~~~G~~~~~~l~v~~~t 131 (245)
T 1eix_A 67 DIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGG---------------ARMMTAAREALVPFGKDAPLLIAVTVLT 131 (245)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGGC---------------HHHHHHHHHTTGGGGGGCCEEEEECSCT
T ss_pred cEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccCC---------------HHHHHHHHHHHHHcCCCCCcEEEEEecC
Confidence 4555554444455555567677778999999985321 2345566666665422 45 33 33222
Q ss_pred Ch--hc-------------HHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHH
Q psy16199 642 NI--TN-------------ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKA 706 (842)
Q Consensus 642 ~~--~~-------------~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~ 706 (842)
.. .+ +..++....+.|.++++.+ +++
T Consensus 132 s~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~--------------------------------------~~e- 172 (245)
T 1eix_A 132 SMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCS--------------------------------------AQE- 172 (245)
T ss_dssp TCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECC--------------------------------------GGG-
T ss_pred CCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeC--------------------------------------HHH-
Confidence 21 11 1122222455677775441 123
Q ss_pred HHHHHhhCCCCcEEEecCcCCHH----------HHHHHHHhCCCEEEEehhhhcc
Q psy16199 707 VSSIAKMFPNFPILGIGGIDSAD----------VALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 707 v~~i~~~~~~ipIi~~GGI~t~~----------da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
++++++..++.+|+..|||..-- .+.+++.+||+.+-+||+++..
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 227 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQS 227 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCC
Confidence 55566655457899999997320 4777889999999999999954
No 446
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.14 E-value=0.013 Score=68.63 Aligned_cols=31 Identities=19% Similarity=0.384 Sum_probs=28.5
Q ss_pred EEEEcCChhHHHHHHHHHHcC--CcEEEEEEeec
Q psy16199 150 VIVLGAGDTAFDCATSALRCG--ANKVLVVFRKG 181 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G--~~~Vtlv~r~~ 181 (842)
|+|||+|..|+-+|..|++.| .+ |+|+++..
T Consensus 8 VvIVG~G~AGl~aAl~la~~G~~~~-V~vlEk~~ 40 (602)
T 1kf6_A 8 LAIVGAGGAGLRAAIAAAQANPNAK-IALISKVY 40 (602)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTCC-EEEEESSC
T ss_pred EEEECCCHHHHHHHHHHHhcCCCCc-EEEEeCCC
Confidence 999999999999999999998 76 99999763
No 447
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.14 E-value=0.15 Score=53.62 Aligned_cols=154 Identities=13% Similarity=0.044 Sum_probs=97.2
Q ss_pred ccceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEeccC-CCCCCCCCC-cccCCCCHHHHHHHHHHHHhhC---CccEE
Q psy16199 563 LSILIASIMCTY-NKDDWLELSKKTEKAGADALELNLSC-PHGMGERGM-GLACGQDPEMVRNISLWVRSSV---KIPFF 636 (842)
Q Consensus 563 ~~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~sc-P~~~~~~~~-G~~~~~~~~~~~~ii~~v~~~~---~~Pv~ 636 (842)
+.|||+-+-.|+ +++...+.+++++++|+++|.|-=.. |..++.-+. +..+ .+.+...+-+++++++. +.-|.
T Consensus 79 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l-~p~~e~~~rI~Aa~~a~~~~~~~i~ 157 (295)
T 1s2w_A 79 DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPL-ADIEEFALKIKACKDSQTDPDFCIV 157 (295)
T ss_dssp SSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCB-CCHHHHHHHHHHHHHHCSSTTCEEE
T ss_pred CCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcc-cCHHHHHHHHHHHHHhcccCCcEEE
Confidence 479998886554 57788889999999999999885332 322222221 1222 45555566666666653 34566
Q ss_pred EEecCC-----hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHH
Q psy16199 637 VKLTPN-----ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIA 711 (842)
Q Consensus 637 vKl~p~-----~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~ 711 (842)
.+.... +++..+-++++.++|||.|.+-.. . ...+.++++.
T Consensus 158 aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~---------------------------~-------~~~~~~~~i~ 203 (295)
T 1s2w_A 158 ARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSK---------------------------K-------ADPSDIEAFM 203 (295)
T ss_dssp EEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC---------------------------S-------SSSHHHHHHH
T ss_pred EeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCC---------------------------C-------CCHHHHHHHH
Confidence 676443 367788899999999999999110 0 0134556666
Q ss_pred hhCC-CCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhcc
Q psy16199 712 KMFP-NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 712 ~~~~-~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+.++ .+|++.+-+-...-++.++-++|.+.|-++..++..
T Consensus 204 ~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 204 KAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 6662 289998733111123667777999999988887743
No 448
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.14 E-value=0.017 Score=64.06 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=29.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+.+|..|++.|.++|+|+++.+
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 499999999999999999999974499999875
No 449
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.12 E-value=0.011 Score=65.21 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=29.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
||+|||||.+|+-+|..|.+.|.+ |+|++|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~-v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIK-VTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-EEEEecCC
Confidence 599999999999999999999985 99999865
No 450
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.12 E-value=0.19 Score=52.83 Aligned_cols=156 Identities=15% Similarity=0.220 Sum_probs=93.7
Q ss_pred HHHHhhcCcCEEEEec-cCC-CCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChh---cHHHHHHHHHHCC
Q psy16199 583 SKKTEKAGADALELNL-SCP-HGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNIT---NITDIAKAAYEGK 657 (842)
Q Consensus 583 a~~~~~agaD~ielN~-scP-~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~---~~~~~a~~~~~~G 657 (842)
|+.++++|+|+|=+.= +.- ...+..+. ..-..+.+...++.|.+.+++||++-+.-.+. ++.+.++.+.++|
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~---~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aG 111 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDL---GISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAG 111 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSS---SCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCC---CCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 4556678999998852 211 11111221 12467888888999999999999999855443 5677788899999
Q ss_pred CCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccch--HHHHHHHHhhC--CCCcEEEecCcCC---H--
Q psy16199 658 ADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMG--LKAVSSIAKMF--PNFPILGIGGIDS---A-- 728 (842)
Q Consensus 658 ~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~a--l~~v~~i~~~~--~~ipIi~~GGI~t---~-- 728 (842)
+++|.+=.... ....|-+.|+.+.|.. .+.|+..+++- +++-|++=-.-.. .
T Consensus 112 aagv~iEDq~~-------------------~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~glde 172 (298)
T 3eoo_A 112 VGAVHLEDQVG-------------------QKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDA 172 (298)
T ss_dssp CSEEEEECBCC-------------------CCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHH
T ss_pred CeEEEECCCCC-------------------CcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHH
Confidence 99999833211 1123445677777754 44444444443 2344554332221 1
Q ss_pred --HHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHH
Q psy16199 729 --DVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 729 --~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
+.+..+.++|||+|.+-.. ..+..++++.+.+
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~---~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAM---KTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCC---CSHHHHHHHHHHH
T ss_pred HHHHHHhhHhcCCCEEEeCCC---CCHHHHHHHHHHc
Confidence 3344566799999976442 2455566665554
No 451
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.12 E-value=0.19 Score=51.96 Aligned_cols=176 Identities=17% Similarity=0.184 Sum_probs=104.1
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCC--CCCCCc---------------ccC---CCC---HHHHH
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGM--GERGMG---------------LAC---GQD---PEMVR 621 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~--~~~~~G---------------~~~---~~~---~~~~~ 621 (842)
-+|+..+...+.+...++++++.++|+|++-...--|.+. ..+|+| ..+ ..| .+.+.
T Consensus 25 ~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~ 104 (262)
T 1zco_A 25 TIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVELVA 104 (262)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHH
Confidence 3677775445788999999999999999988876666332 112221 000 001 11121
Q ss_pred HH----------------HHHHHhhCCccEEEEecC--ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcc
Q psy16199 622 NI----------------SLWVRSSVKIPFFVKLTP--NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683 (842)
Q Consensus 622 ~i----------------i~~v~~~~~~Pv~vKl~p--~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~ 683 (842)
++ ++++.+ +++||++|-.. ++.++...++.+...|..-+++.-+-..
T Consensus 105 ~~vd~~kIga~~~~n~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~-------------- 169 (262)
T 1zco_A 105 KYSDILQIGARNSQNFELLKEVGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIR-------------- 169 (262)
T ss_dssp HHCSEEEECGGGTTCHHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBC--------------
T ss_pred hhCCEEEECcccccCHHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCC--------------
Confidence 11 111111 46899999754 5778888888888889876766443100
Q ss_pred cCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEe----cCcCC--HHHHHHHHHhCCCEEEEehhhh-----ccC
Q psy16199 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGI----GGIDS--ADVALQFIQAGAHAVQICSAVQ-----NQD 752 (842)
Q Consensus 684 ~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~----GGI~t--~~da~~~l~~GA~~Vqv~ta~l-----~~g 752 (842)
...+| +.....++.+..+++.+ ++|||+. +|... ..-+..++++||++++|=+-+- ..+
T Consensus 170 ------~~~~y---~~~~v~L~ai~~lk~~~-~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~ 239 (262)
T 1zco_A 170 ------TFETA---TRFTLDISAVPVVKELS-HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDS 239 (262)
T ss_dssp ------CSCCS---SSSBCCTTHHHHHHHHB-SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCT
T ss_pred ------CCCCc---ChhhcCHHHHHHHHhhh-CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChh
Confidence 00112 12334467788888887 6898764 33322 1235667789999888877642 122
Q ss_pred -----chhHHHHHHHHHH
Q psy16199 753 -----FTVVDDYITGLQT 765 (842)
Q Consensus 753 -----p~~~~~i~~~l~~ 765 (842)
|.-+++|.+.++.
T Consensus 240 ~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 240 QQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp TTCBCHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHH
Confidence 6667777776654
No 452
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.10 E-value=0.14 Score=53.85 Aligned_cols=167 Identities=13% Similarity=0.055 Sum_probs=104.6
Q ss_pred ccceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEeccC-CCCCCCCC-CcccCCCCHHHHHHHHHHHHhhC---CccEE
Q psy16199 563 LSILIASIMCTY-NKDDWLELSKKTEKAGADALELNLSC-PHGMGERG-MGLACGQDPEMVRNISLWVRSSV---KIPFF 636 (842)
Q Consensus 563 ~~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~sc-P~~~~~~~-~G~~~~~~~~~~~~ii~~v~~~~---~~Pv~ 636 (842)
+.|||+-+-.|+ +++...+.++++.++|+++|.|-=+. |..++..+ .|..+ .+.+...+-++++++.. +.-|.
T Consensus 75 ~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l-~p~~e~~~kI~Aa~~a~~~~~~~i~ 153 (290)
T 2hjp_A 75 SIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQEL-VRIEEFQGKIAAATAARADRDFVVI 153 (290)
T ss_dssp SSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCB-CCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcc-cCHHHHHHHHHHHHHhcccCCcEEE
Confidence 378988886664 68889999999999999999885332 32222221 01222 45555566666666653 45577
Q ss_pred EEecCC-----hhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHH
Q psy16199 637 VKLTPN-----ITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIA 711 (842)
Q Consensus 637 vKl~p~-----~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~ 711 (842)
.+.... +++..+-++++.++|||.|.+-.. ..+.+.++++.
T Consensus 154 aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~----------------------------------~~~~~~~~~i~ 199 (290)
T 2hjp_A 154 ARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSR----------------------------------QKTPDEILAFV 199 (290)
T ss_dssp EEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC----------------------------------CSSSHHHHHHH
T ss_pred EeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCC----------------------------------CCCHHHHHHHH
Confidence 776544 467888889999999999999211 11134567788
Q ss_pred hhCCC-CcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 712 KMFPN-FPILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 712 ~~~~~-ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
+.++. +|++++-.-...-+..++-++| .+.|-++..++.. ...-+.+-++.++
T Consensus 200 ~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~ra---a~~a~~~~~~~i~ 254 (290)
T 2hjp_A 200 KSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRA---AVGAVREVFARIR 254 (290)
T ss_dssp HHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHH---HHHHHHHHHHHHH
T ss_pred HHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHH---HHHHHHHHHHHHH
Confidence 88732 9999863201122455666799 9999888777733 3333444444433
No 453
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=96.06 E-value=0.15 Score=56.23 Aligned_cols=143 Identities=11% Similarity=0.077 Sum_probs=101.5
Q ss_pred CHhHHHH-HHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecCChh--cHHHH
Q psy16199 575 NKDDWLE-LSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNIT--NITDI 649 (842)
Q Consensus 575 ~~e~~~~-~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p~~~--~~~~~ 649 (842)
++++..+ +++...+.|+.++-+.++.+... .....++...+.+++||+.+ ++++.+.....++ +..++
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~-------d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~ 218 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVGR-------NRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEV 218 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTCT-------TCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCccc-------ccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHH
Confidence 5555444 34444456999999999876321 11133556778899999986 6899999876554 67889
Q ss_pred HHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHH
Q psy16199 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSAD 729 (842)
Q Consensus 650 a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~ 729 (842)
++.+++.|+..|-= | +.+-.++..+++++.+ ++||++..-+.+..
T Consensus 219 ~~~l~~~~i~~iEe-----------------P-----------------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 263 (388)
T 3tcs_A 219 GHMLQDHGFCHFEE-----------------P-----------------CPYWELAQTKQVTDAL-DIDVTGGEQDCDLP 263 (388)
T ss_dssp HHHHHHTTCCEEEC-----------------C-----------------SCTTCHHHHHHHHHHC-SSCEEECTTCCCHH
T ss_pred HHHHhhcCCeEEEC-----------------C-----------------CCccCHHHHHHHHHhc-CCCEEcCCccCCHH
Confidence 99999998876521 1 1122366778888888 69999999999999
Q ss_pred HHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 730 VALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 730 da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
|+.+++..| ++.||+--.-. .|..-..++.
T Consensus 264 ~~~~~i~~~a~d~v~~d~~~~-GGit~a~kia 294 (388)
T 3tcs_A 264 TWQRMIDMRAVDIVQPDILYL-GGICRTLRVV 294 (388)
T ss_dssp HHHHHHHHTCCSEECCCHHHH-TSHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEeCcccc-CCHHHHHHHH
Confidence 999999975 88998776655 4554444443
No 454
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.04 E-value=0.013 Score=64.27 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=29.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++..
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~-V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVK-TLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCe-EEEEeCCC
Confidence 499999999999999999999975 99998764
No 455
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.04 E-value=0.033 Score=56.53 Aligned_cols=89 Identities=20% Similarity=0.225 Sum_probs=68.7
Q ss_pred HHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcc
Q psy16199 620 VRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT 699 (842)
Q Consensus 620 ~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~ 699 (842)
+.++++.+++.-=+||+.-. +.++..++++++.+.|++.|-++.+
T Consensus 24 m~~~~~~l~~~~vv~Vir~~--~~~~a~~~a~al~~gGi~~iEvt~~--------------------------------- 68 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAID--NAEDIIPLGKVLAENGLPAAEITFR--------------------------------- 68 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCS--SGGGHHHHHHHHHHTTCCEEEEETT---------------------------------
T ss_pred HHHHHHHHHhCCEEEEEEcC--CHHHHHHHHHHHHHCCCCEEEEeCC---------------------------------
Confidence 33566666654224554322 3468999999999999999999543
Q ss_pred ccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEE
Q psy16199 700 RPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744 (842)
Q Consensus 700 ~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv 744 (842)
.|.+++.++++++++++ .+++.|.|.+.+++..++++||+.|..
T Consensus 69 t~~a~e~I~~l~~~~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 69 SDAAVEAIRLLRQAQPE-MLIGAGTILNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp STTHHHHHHHHHHHCTT-CEEEEECCCSHHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHHHHHHHhCCC-CEEeECCcCCHHHHHHHHHcCCCEEEe
Confidence 23458999999999864 799999999999999999999999953
No 456
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.03 E-value=0.058 Score=55.72 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=72.6
Q ss_pred CccEEEEe---cCCh-----hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccch
Q psy16199 632 KIPFFVKL---TPNI-----TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMG 703 (842)
Q Consensus 632 ~~Pv~vKl---~p~~-----~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~a 703 (842)
+++|+.=+ +|.- .++.++|+..+++||++|.+- |. .+.+.| .
T Consensus 45 ~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvl-t~-----------------------~~~f~G------~ 94 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVL-TE-----------------------PHRFGG------S 94 (254)
T ss_dssp SCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEE-CC-----------------------CSSSCC------C
T ss_pred CCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEe-cc-----------------------hhhhcc------C
Confidence 46777633 4431 367899999999999999982 10 111222 2
Q ss_pred HHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHH
Q psy16199 704 LKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 704 l~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
.+.+..+++.+ ++||..-++|.+..++.+++.+|||+|-++.+.+. ..++++.+
T Consensus 95 ~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~---~~l~~l~~ 148 (254)
T 1vc4_A 95 LLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG---ELTGAYLE 148 (254)
T ss_dssp HHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG---GGHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH---HHHHHHHH
Confidence 56788888888 79999999999999999999999999999999883 45555544
No 457
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=96.02 E-value=0.029 Score=62.69 Aligned_cols=150 Identities=14% Similarity=0.096 Sum_probs=99.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCC----CCCcccC--------C--------CCHHHHHHH
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGE----RGMGLAC--------G--------QDPEMVRNI 623 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~----~~~G~~~--------~--------~~~~~~~~i 623 (842)
.|+-++.. +.++++..+.++...+.|+.+|-+.++.|..... .+.+... . ...+...++
T Consensus 139 v~~y~~~~-~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 139 VMVYCHTT-GHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp EEEEEEEC-CSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred eeEeEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 45666653 5678887777776666799999999887632100 0000000 0 002345688
Q ss_pred HHHHHhhC--CccEEEEecCChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcc
Q psy16199 624 SLWVRSSV--KIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT 699 (842)
Q Consensus 624 i~~v~~~~--~~Pv~vKl~p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~ 699 (842)
+++||+.+ +++|.+.....++ +..++++.+++.|++.|-- |.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe-----------------P~----------------- 263 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMED-----------------PT----------------- 263 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC-----------------CS-----------------
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC-----------------CC-----------------
Confidence 99999986 6899999866443 7788899999999887631 10
Q ss_pred ccchHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhC-CCEEEEehhhh
Q psy16199 700 RPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 700 ~p~al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l 749 (842)
.|..++..+++++.+ ++||++...+.+.+++.+++..| ++.||+--.-.
T Consensus 264 ~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~ 313 (426)
T 4e4f_A 264 PAENQACFRLIRQHT-VTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHA 313 (426)
T ss_dssp CCSSGGGGHHHHTTC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred ChHHHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 111244456778887 69999999999999999999976 78998755544
No 458
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.01 E-value=0.023 Score=65.45 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=29.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||..|+.+|..|++.|.+ |+|++++.
T Consensus 45 dVvIIGgG~aGl~aA~~l~~~G~~-V~liE~~~ 76 (523)
T 1mo9_A 45 DAIFIGGGAAGRFGSAYLRAMGGR-QLIVDRWP 76 (523)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 499999999999999999999975 99999876
No 459
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.01 E-value=0.37 Score=51.83 Aligned_cols=176 Identities=17% Similarity=0.188 Sum_probs=107.7
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCC--CCCCcccCCCCHHHHHHHHHHHHh-------------
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMG--ERGMGLACGQDPEMVRNISLWVRS------------- 629 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~--~~~~G~~~~~~~~~~~~ii~~v~~------------- 629 (842)
-+|+....-.+.+...++++.+.++|+|++-..+--|.+.. -.++| .+.+..+.+..++
T Consensus 108 ~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg------~egl~~l~~~~~e~Gl~~~te~~d~~ 181 (350)
T 1vr6_A 108 TIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLG------EKGLEYLREAADKYGMYVVTEALGED 181 (350)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCT------HHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCC------HHHHHHHHHHHHHcCCcEEEEeCCHH
Confidence 36666643347888999999999999999888877774421 12222 1222111111111
Q ss_pred -----------------------------hCCccEEEEecC--ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCC
Q psy16199 630 -----------------------------SVKIPFFVKLTP--NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN 678 (842)
Q Consensus 630 -----------------------------~~~~Pv~vKl~p--~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~ 678 (842)
.+++||++|-.. ++.++...++.+...|-.-+++.-+-..
T Consensus 182 ~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~--------- 252 (350)
T 1vr6_A 182 DLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIR--------- 252 (350)
T ss_dssp GHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBC---------
T ss_pred HHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCC---------
Confidence 246899999754 5668888888888999876777421000
Q ss_pred CCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEE-e---cCcCC--HHHHHHHHHhCCCEEEEehhhh---
Q psy16199 679 PWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILG-I---GGIDS--ADVALQFIQAGAHAVQICSAVQ--- 749 (842)
Q Consensus 679 ~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~-~---GGI~t--~~da~~~l~~GA~~Vqv~ta~l--- 749 (842)
.+.++ ......++.+..+++.+ ++||++ + +|-.. ..-+..++++||++++|=+-+-
T Consensus 253 -----------typ~~---~~~~vdl~ai~~lk~~~-~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~ 317 (350)
T 1vr6_A 253 -----------TFEKA---TRNTLDISAVPIIRKES-HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEK 317 (350)
T ss_dssp -----------CSCCS---SSSBCCTTHHHHHHHHB-SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGG
T ss_pred -----------CCCCc---ChhhhhHHHHHHHHHhh-CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCccc
Confidence 00011 11223366777788887 799877 2 24332 4556777889999888876532
Q ss_pred --cc-----CchhHHHHHHHHHHHHHhc
Q psy16199 750 --NQ-----DFTVVDDYITGLQTLLYLK 770 (842)
Q Consensus 750 --~~-----gp~~~~~i~~~l~~~m~~~ 770 (842)
.. .|.-+.+|.+.++..-...
T Consensus 318 al~D~~~sL~p~e~~~lv~~ir~i~~al 345 (350)
T 1vr6_A 318 ALSDGKQSLDFELFKELVQEMKKLADAL 345 (350)
T ss_dssp CSSCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhcCCHHHHHHHHHHHHHHHHHh
Confidence 11 2777888888887655443
No 460
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=96.01 E-value=0.11 Score=57.57 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=103.3
Q ss_pred cceEEEeccCCC--HhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEe
Q psy16199 564 SILIASIMCTYN--KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKL 639 (842)
Q Consensus 564 ~pvi~si~~g~~--~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl 639 (842)
.|+-+++....+ ++++.+.++.+.+.|+..+.++++ |. .| .+.+++||+.+ ++++.|..
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~~------------~d----~~~v~avR~a~G~~~~L~vDa 212 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-PG------------WD----VEPLQETRRAVGDHFPLWTDA 212 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-TT------------BS----HHHHHHHHHHHCTTSCEEEEC
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-cc------------hH----HHHHHHHHHhcCCCCEEEEeC
Confidence 455566632235 888888888877789999999983 21 23 35677788775 68999988
Q ss_pred cCCh--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCC
Q psy16199 640 TPNI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNF 717 (842)
Q Consensus 640 ~p~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~i 717 (842)
...+ .+ .++++.+++.|++.|- .| +.|-.++..+++++.. ++
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iE-----------------qP-----------------~~~~d~~~~~~l~~~~-~i 256 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHE-----------------QP-----------------LHYEALLDLKELGERI-ET 256 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEE-----------------SC-----------------SCTTCHHHHHHHHHHS-SS
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEe-----------------CC-----------------CChhhHHHHHHHHhhC-CC
Confidence 6544 46 7889999998877652 01 1222367778888888 69
Q ss_pred cEEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHH
Q psy16199 718 PILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYI 760 (842)
Q Consensus 718 pIi~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~ 760 (842)
||++...+.+..|+.+++..| ++.||+--.-. .|..-..++.
T Consensus 257 PIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~ia 299 (400)
T 3mwc_A 257 PICLDESLISSRVAEFVAKLGISNIWNIKIQRV-GGLLEAIKIY 299 (400)
T ss_dssp CEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSHHHHHHHH
T ss_pred CEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhh-CCHHHHHHHH
Confidence 999999999999999999976 89999877666 3444444443
No 461
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.99 E-value=0.18 Score=53.13 Aligned_cols=134 Identities=10% Similarity=0.101 Sum_probs=86.6
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEE----Ee
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFV----KL 639 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~v----Kl 639 (842)
.++|+-+-.+.-+.....+++.+.++|+|++.+|... .++.++..++..++.-+.|.++ ..
T Consensus 77 ~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~~---------------G~~~m~aa~e~a~~~~~~~~llaVtvLT 141 (303)
T 3ru6_A 77 FKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASA---------------GKIAIQEVMTRLSKFSKRPLVLAVSALT 141 (303)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG---------------CHHHHHHHHHHHTTSSSCCEEEEECSCT
T ss_pred CCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEeccC---------------CHHHHHHHHHHHHhcCCCceEEEEEEec
Confidence 5677777654445555556667777899999998421 2455666666665443334332 22
Q ss_pred cCChh------------cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHH
Q psy16199 640 TPNIT------------NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAV 707 (842)
Q Consensus 640 ~p~~~------------~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v 707 (842)
+.+-. .+..+|+.+.+.|++|++.+.+ + +
T Consensus 142 S~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~--------------------------------------E-~ 182 (303)
T 3ru6_A 142 SFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF--------------------------------------E-S 182 (303)
T ss_dssp TCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT--------------------------------------T-H
T ss_pred CCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH--------------------------------------H-H
Confidence 32211 1346788889999999887211 1 3
Q ss_pred HHHHhhCCCCcEEEecCcCCHH----------HHHHHHHhCCCEEEEehhhhcc
Q psy16199 708 SSIAKMFPNFPILGIGGIDSAD----------VALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 708 ~~i~~~~~~ipIi~~GGI~t~~----------da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
..+++.+++-.++.++||+-.. .+.+++.+|||.+-+||++...
T Consensus 183 ~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a 236 (303)
T 3ru6_A 183 KKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKN 236 (303)
T ss_dssp HHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 4667777656789999997221 3567788999999999999853
No 462
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.99 E-value=0.0052 Score=66.23 Aligned_cols=90 Identities=20% Similarity=0.185 Sum_probs=58.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCc----------cccC-----CHHH-H----HHHHhcCcEEecCCCc
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCT----------NIRA-----VPEE-V----QLAWEEKCEFLPFMSP 208 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~----------~~~~-----~~~~-~----~~~~~~gV~i~~~~~v 208 (842)
+|+|||||..|+.+|..|.+.|.+ |+++++.... ..+. ...+ . +.+.+.|++++.++ +
T Consensus 16 ~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v 93 (335)
T 2a87_A 16 DVIVIGSGPAGYTAALYAARAQLA-PLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED-V 93 (335)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCC-CEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CEEEECCCHHHHHHHHHHHhCCCe-EEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-E
Confidence 499999999999999999999975 9999864210 0111 1122 1 22345689998875 7
Q ss_pred eEEEccCCcEEEE-EEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 209 VQVDVKDNKIAGM-QFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 209 ~~v~~~~~~v~~V-~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+.+.. ++.. .| .+. ++ .++.+|.||+|+|..|
T Consensus 94 ~~i~~-~~~~-~v~~~~-------------~g--~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 94 ESVSL-HGPL-KSVVTA-------------DG--QTHRARAVILAMGAAA 126 (335)
T ss_dssp EEEEC-SSSS-EEEEET-------------TS--CEEEEEEEEECCCEEE
T ss_pred EEEEe-CCcE-EEEEeC-------------CC--CEEEeCEEEECCCCCc
Confidence 77753 2211 12 211 12 2689999999999874
No 463
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.98 E-value=0.19 Score=52.80 Aligned_cols=164 Identities=15% Similarity=0.088 Sum_probs=103.2
Q ss_pred ccceEEEeccCC-CHhHHHHHHHHHhhcCcCEEEEecc-CCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC---CccEEE
Q psy16199 563 LSILIASIMCTY-NKDDWLELSKKTEKAGADALELNLS-CPHGMGERGMGLACGQDPEMVRNISLWVRSSV---KIPFFV 637 (842)
Q Consensus 563 ~~pvi~si~~g~-~~e~~~~~a~~~~~agaD~ielN~s-cP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~---~~Pv~v 637 (842)
+.|||+-+-.|+ +++...+.+++++++|+++|.|-=. .|...+..+ |..+ .+.+...+-+++.+++. ++=|+.
T Consensus 83 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~-gk~l-~~~~e~~~ri~Aa~~A~~~~~~~I~A 160 (298)
T 3eoo_A 83 NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRP-GKEC-VPAGEMVDRIKAAVDARTDETFVIMA 160 (298)
T ss_dssp CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCC-CCCB-CCHHHHHHHHHHHHHHCSSTTSEEEE
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCC-CCee-cCHHHHHHHHHHHHHhccCCCeEEEE
Confidence 379998887665 6888899999999999999988532 122111111 2223 45555445555555443 334555
Q ss_pred EecC----ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhh
Q psy16199 638 KLTP----NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKM 713 (842)
Q Consensus 638 Kl~p----~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~ 713 (842)
+... .+++..+=+++..++|||.|.+-. +...+.++++.++
T Consensus 161 RTDa~~~~gldeai~Ra~ay~~AGAD~if~~~-----------------------------------~~~~ee~~~~~~~ 205 (298)
T 3eoo_A 161 RTDAAAAEGIDAAIERAIAYVEAGADMIFPEA-----------------------------------MKTLDDYRRFKEA 205 (298)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHTTCSEEEECC-----------------------------------CCSHHHHHHHHHH
T ss_pred eehhhhhcCHHHHHHHHHhhHhcCCCEEEeCC-----------------------------------CCCHHHHHHHHHH
Confidence 5532 234566777888999999999811 0126778888888
Q ss_pred CCCCcEEEe---cCcCCHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHHHHH
Q psy16199 714 FPNFPILGI---GGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLL 767 (842)
Q Consensus 714 ~~~ipIi~~---GGI~t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~~~m 767 (842)
+ ++|+.+| +|-.-.-+..++-++|.+.|-++..++.. ...-+.+.++.++
T Consensus 206 ~-~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra---a~~a~~~~~~~i~ 258 (298)
T 3eoo_A 206 V-KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRA---MNKAALNFYETVR 258 (298)
T ss_dssp H-CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHH---HHHHHHHHHHHHH
T ss_pred c-CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH---HHHHHHHHHHHHH
Confidence 8 5898775 44322234667777999999988888743 3344444444444
No 464
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.98 E-value=0.029 Score=65.37 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=29.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.+
T Consensus 34 DVvVIGgGi~G~~~A~~La~rG~~-V~LlE~~~ 65 (571)
T 2rgh_A 34 DLLIIGGGITGAGVAVQAAASGIK-TGLIEMQD 65 (571)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-EEEEeCCC
Confidence 499999999999999999999986 99998653
No 465
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=95.97 E-value=0.2 Score=55.07 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=102.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-.++..+...+...++.+.+++.|+..+-+.++. .+++.-.+.+++||+.+ ++++.+....
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~--------------~~~~~d~~~v~avR~a~g~~~~l~vDaN~ 203 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGA--------------GEVDRDLAHVIAIKKALGDSASVRVDVNQ 203 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCS--------------SCHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCC--------------CCHHHHHHHHHHHHHHcCCCCeEEEeCCC
Confidence 3555555434333445555566655699999998743 23556667888999876 4789998866
Q ss_pred Chh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcE
Q psy16199 642 NIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI 719 (842)
Q Consensus 642 ~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipI 719 (842)
.++ +..++++.+++.|+..|- .| +.|-.++..+++++.. ++||
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iE-----------------qP-----------------~~~~d~~~~~~l~~~~-~ipI 248 (382)
T 3dgb_A 204 AWDEAVALRACRILGGNGIDLIE-----------------QP-----------------ISRNNRAGMVRLNASS-PAPI 248 (382)
T ss_dssp CBCHHHHHHHHHHHHTTTCCCEE-----------------CC-----------------BCTTCHHHHHHHHHHC-SSCE
T ss_pred CCCHHHHHHHHHHHhhcCcCeee-----------------CC-----------------CCccCHHHHHHHHHhC-CCCE
Confidence 554 677889999998876552 11 1223377788888888 6999
Q ss_pred EEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 720 LGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 720 i~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
++..-+.+..|+.+++..| ++.||+--.-. .|..-..++
T Consensus 249 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~-GGit~~~~i 288 (382)
T 3dgb_A 249 MADESIECVEDAFNLAREGAASVFALKIAKN-GGPRATLRT 288 (382)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEEECHHHH-TSHHHHHHH
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHH
Confidence 9999999999999999865 89999876665 344444444
No 466
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=95.97 E-value=0.28 Score=49.40 Aligned_cols=135 Identities=20% Similarity=0.149 Sum_probs=77.7
Q ss_pred HHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCChhcHHHHHHHHHHCCCCEEEEe
Q psy16199 585 KTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAI 664 (842)
Q Consensus 585 ~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~~~~~~~a~~~~~~G~d~i~v~ 664 (842)
++.+.|||++-|+.|.- . .....+.+.++...+. ++-+++=+. +..+. +.+...+.+ |+..
T Consensus 83 ~l~~~Ga~~VllghseR------R------~~~~e~~~k~~~A~~~-GL~~ivcVg----e~~e~-~~~~~~~~~-iIay 143 (225)
T 1hg3_A 83 AVKEAGAVGTLLNHSEN------R------MILADLEAAIRRAEEV-GLMTMVCSN----NPAVS-AAVAALNPD-YVAV 143 (225)
T ss_dssp HHHHTTCCEEEESCGGG------C------CBHHHHHHHHHHHHHH-TCEEEEEES----SHHHH-HHHHTTCCS-EEEE
T ss_pred HHHHcCCCEEEECcchh------c------CCHHHHHHHHHHHHHC-CCEEEEEeC----CHHHH-HHHhcCCCC-EEEE
Confidence 44567999999985542 1 2233456666655544 443333232 22333 344555665 4444
Q ss_pred cCCCccccCCCCCCCCCcccCCCccccCCCCC---Cccccc-hHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCC
Q psy16199 665 NTVSGLMSLSADGNPWPAVGTKKLTTYGGVSG---NATRPM-GLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAH 740 (842)
Q Consensus 665 nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG---~~~~p~-al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~ 740 (842)
|..- ..| +| ....|- .-+..+.+++..++++|+.-|||.+.+|+..+...|+|
T Consensus 144 ep~w---------------------aiG--tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vD 200 (225)
T 1hg3_A 144 EPPE---------------------LIG--TGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTV 200 (225)
T ss_dssp CCTT---------------------TTT--TSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred eChh---------------------hhc--cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCC
Confidence 4211 111 22 111222 23333344444446999999999999999999999999
Q ss_pred EEEEehhhhccCchhHHHHHHHH
Q psy16199 741 AVQICSAVQNQDFTVVDDYITGL 763 (842)
Q Consensus 741 ~Vqv~ta~l~~gp~~~~~i~~~l 763 (842)
++-||+++|.. .+ +.++.++|
T Consensus 201 G~LVG~a~l~a-~~-~~~~i~~l 221 (225)
T 1hg3_A 201 GVLLASGVTKA-KD-PEKAIWDL 221 (225)
T ss_dssp EEEESHHHHTC-SS-HHHHHHHH
T ss_pred EEEeCHHHHCC-cC-HHHHHHHH
Confidence 99999999953 33 33444443
No 467
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.97 E-value=0.014 Score=64.68 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+-+|..|++.|.+ |+|+++.+
T Consensus 25 dV~IVGaG~aGl~~A~~La~~G~~-V~v~E~~~ 56 (407)
T 3rp8_A 25 KAIVIGAGIGGLSAAVALKQSGID-CDVYEAVK 56 (407)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 399999999999999999999975 99999875
No 468
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.96 E-value=0.18 Score=51.58 Aligned_cols=133 Identities=14% Similarity=0.095 Sum_probs=80.7
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--Cc--c--EEEE
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KI--P--FFVK 638 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~--P--v~vK 638 (842)
+++.-+-.+..++....+++.+.++|||+|.+|.... .+.+...++.+++.. +. | +.|-
T Consensus 56 ~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~g---------------~~~l~~~~~~~~~~~~~g~~~~~~~~V~ 120 (239)
T 1dbt_A 56 ELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGG---------------KKMMQAALEGLEEGTPAGKKRPSLIAVT 120 (239)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGC---------------HHHHHHHHHHHHHHSCTTSCCCEEEEEC
T ss_pred cEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcCC---------------HHHHHHHHHHHHhhhccCCCCccEEEEE
Confidence 4555554444456555567777788999999985321 234566777777651 32 5 4444
Q ss_pred ecCCh--hcH--------------HHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccc
Q psy16199 639 LTPNI--TNI--------------TDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702 (842)
Q Consensus 639 l~p~~--~~~--------------~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~ 702 (842)
+.+.. .++ ..++....+.|.++++..
T Consensus 121 ~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~-------------------------------------- 162 (239)
T 1dbt_A 121 QLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCS-------------------------------------- 162 (239)
T ss_dssp SCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECC--------------------------------------
T ss_pred EcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEEC--------------------------------------
Confidence 42222 111 122222355666665441
Q ss_pred hHHHHHHHHhhCCCCcEEEecCcCCHHH----------HHHHHHhCCCEEEEehhhhcc
Q psy16199 703 GLKAVSSIAKMFPNFPILGIGGIDSADV----------ALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 703 al~~v~~i~~~~~~ipIi~~GGI~t~~d----------a~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+ .-++++++..++.+|+..|||.--.. ..+++.+||+.+-+||+++..
T Consensus 163 ~-~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a 220 (239)
T 1dbt_A 163 V-HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKA 220 (239)
T ss_dssp G-GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred H-HHHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCC
Confidence 0 22445666654578999999974332 267889999999999999954
No 469
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=95.96 E-value=0.19 Score=55.28 Aligned_cols=146 Identities=10% Similarity=0.040 Sum_probs=106.5
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP 641 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p 641 (842)
.|+-+++. ..+++++.+.++.+.+.|+..+-+.++++.. ..+++.-.+.+++||+.+ ++++.+....
T Consensus 135 v~~y~s~~-~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~----------~~~~~~d~~~v~avR~a~G~~~~L~vDaN~ 203 (386)
T 3fv9_G 135 VPVISSIG-GDTPEAMRAKVARHRAQGFKGHSIKIGASEA----------EGGPALDAERITACLADRQPGEWYLADANN 203 (386)
T ss_dssp BCEEEEEC-SCCHHHHHHHHHHHHHTTCCEEEEECCCCTT----------TTHHHHHHHHHHHHTTTCCTTCEEEEECTT
T ss_pred eeeeEecC-CCCHHHHHHHHHHHHHCCCCEEEEeccCCCC----------CCCHHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 57777775 4688999988888877899999999988632 135677778899999986 6899999876
Q ss_pred Chh--cHHHHHHHH-HHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 642 NIT--NITDIAKAA-YEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 642 ~~~--~~~~~a~~~-~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
.++ +..++++.+ .+.++ .| | .| + + .++..+++++.. ++|
T Consensus 204 ~~~~~~A~~~~~~l~~~~~i-~i--------------E---eP-----------------~-~-~~~~~~~l~~~~-~iP 245 (386)
T 3fv9_G 204 GLTVEHALRMLSLLPPGLDI-VL--------------E---AP-----------------C-A-SWAETKSLRARC-ALP 245 (386)
T ss_dssp CCCHHHHHHHHHHSCSSCCC-EE--------------E---CC-----------------C-S-SHHHHHHHHTTC-CSC
T ss_pred CCCHHHHHHHHHHhhccCCc-EE--------------e---cC-----------------C-C-CHHHHHHHHhhC-CCC
Confidence 554 555666666 44443 22 1 11 1 1 266678888887 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDY 759 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i 759 (842)
|.+..-+.+..|+.+++..| ++.||+--... .|..-..++
T Consensus 246 Ia~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~-GGit~~~~i 286 (386)
T 3fv9_G 246 LLLDELIQTETDLIAAIRDDLCDGVGLKVSKQ-GGITPMLRQ 286 (386)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEEEHHHH-TSHHHHHHH
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEEECcccc-CCHHHHHHH
Confidence 99999999999999999965 89999876666 344444333
No 470
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.95 E-value=0.21 Score=52.08 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=98.6
Q ss_pred cceEEEeccCC--CHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC---CccEEE-
Q psy16199 564 SILIASIMCTY--NKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV---KIPFFV- 637 (842)
Q Consensus 564 ~pvi~si~~g~--~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~---~~Pv~v- 637 (842)
.||++-+-.|+ +++...+.++++.++|+++|.|-=...| . |.. ..+.+...+.++++++.. ++|+.|
T Consensus 77 ~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~--~----~k~-l~~~~e~~~~I~aa~~a~~~~g~~~~i~ 149 (275)
T 2ze3_A 77 IPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGL--T----PTE-LYDLDSQLRRIEAARAAIDASGVPVFLN 149 (275)
T ss_dssp SCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSS--S----SSC-BCCHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCC--C----CCc-cCCHHHHHHHHHHHHHhHhhcCCCeEEE
Confidence 69999887775 5889999999999999999988533322 1 112 256777777788777762 466544
Q ss_pred -EecC-----------ChhcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHH
Q psy16199 638 -KLTP-----------NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLK 705 (842)
Q Consensus 638 -Kl~p-----------~~~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~ 705 (842)
|... .+++..+-++++.++|||.|.+-. ....+
T Consensus 150 aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~-----------------------------------~~~~~ 194 (275)
T 2ze3_A 150 ARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPL-----------------------------------ALQSQ 194 (275)
T ss_dssp EECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTT-----------------------------------CCCHH
T ss_pred EechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECC-----------------------------------CCCHH
Confidence 4422 245667778889999999998811 01256
Q ss_pred HHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhhc
Q psy16199 706 AVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQN 750 (842)
Q Consensus 706 ~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l~ 750 (842)
.++++.+.+ ++|+-.+.+ ...-+..++-++|.+.|-.+..++.
T Consensus 195 ~~~~i~~~~-~~P~n~~~~-~~~~~~~eL~~lGv~~v~~~~~~~r 237 (275)
T 2ze3_A 195 DIRALADAL-RVPLNVMAF-PGSPVPRALLDAGAARVSFGQSLML 237 (275)
T ss_dssp HHHHHHHHC-SSCEEEECC-TTSCCHHHHHHTTCSEEECTTHHHH
T ss_pred HHHHHHHhc-CCCEEEecC-CCCCCHHHHHHcCCcEEEEChHHHH
Confidence 778888888 588866643 1222345777799999987777663
No 471
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=95.95 E-value=0.009 Score=67.76 Aligned_cols=32 Identities=34% Similarity=0.499 Sum_probs=28.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||..|+.+|..|++.|.+ |+++++++
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~-V~liEk~~ 37 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYN-VLMADPKG 37 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCe-EEEEECCC
Confidence 399999999999999999999975 99999654
No 472
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.94 E-value=0.016 Score=65.63 Aligned_cols=31 Identities=35% Similarity=0.523 Sum_probs=28.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
+|+|||||..|+.+|..|++.|. +|+|++++
T Consensus 6 dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~ 36 (467)
T 1zk7_A 6 QVAVIGSGGAAMAAALKAVEQGA-QVTLIERG 36 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 49999999999999999999997 59999987
No 473
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.92 E-value=0.0059 Score=69.87 Aligned_cols=32 Identities=34% Similarity=0.544 Sum_probs=28.2
Q ss_pred cEEEEcCChhHHHHHHHHHHc--CCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRC--GANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~~ 181 (842)
+|+|||||..|+.+|..|.+. |. +|+|+++.+
T Consensus 13 ~vvIIGgG~AGl~aA~~L~~~~~g~-~V~lie~~~ 46 (493)
T 1m6i_A 13 PFLLIGGGTAAFAAARSIRARDPGA-RVLIVSEDP 46 (493)
T ss_dssp EEEEESCSHHHHHHHHHHHHHSTTC-EEEEEESSS
T ss_pred CEEEECChHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence 399999999999999999887 65 599999875
No 474
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.90 E-value=0.014 Score=69.64 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=28.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
.|+|||||.+|+-+|..|++.|.+ |+|+++.
T Consensus 274 DVvIIGgGiaGlsaA~~La~~G~~-V~vlEk~ 304 (676)
T 3ps9_A 274 EAAIIGGGIASALLSLALLRRGWQ-VTLYCAD 304 (676)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCE-EEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEeCC
Confidence 399999999999999999999974 9999985
No 475
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=95.90 E-value=0.063 Score=58.91 Aligned_cols=123 Identities=15% Similarity=0.167 Sum_probs=91.0
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC--hhcHHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN--ITNITDIA 650 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~--~~~~~~~a 650 (842)
.+++++.+.++++.+.|++.+.++++ | ..+. +.+++||+.+ ++++.+..... ..+ .+++
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~-~------------~~d~----~~v~avr~a~~~~~l~vDan~~~~~~~-~~~~ 208 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK-P------------GWDV----QPVRATREAFPDIRLTVDANSAYTLAD-AGRL 208 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-T------------TBSH----HHHHHHHHHCTTSCEEEECTTCCCGGG-HHHH
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC-h------------HHHH----HHHHHHHHHcCCCeEEEeCCCCCCHHH-HHHH
Confidence 37888988888888889999999873 2 1233 4566677665 68899987553 457 8888
Q ss_pred HHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHH
Q psy16199 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV 730 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~d 730 (842)
+.+++.|++.|-= | +.|..+...+++++.+ ++||++...+.+.+|
T Consensus 209 ~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 253 (375)
T 1r0m_A 209 RQLDEYDLTYIEQ-----------------P-----------------LAWDDLVDHAELARRI-RTPLCLDESVASASD 253 (375)
T ss_dssp HTTGGGCCSCEEC-----------------C-----------------SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHH
T ss_pred HHHHhCCCcEEEC-----------------C-----------------CCcccHHHHHHHHHhC-CCCEEecCccCCHHH
Confidence 8888888776631 1 1122255667788887 699999999999999
Q ss_pred HHHHHHhC-CCEEEEehhhh
Q psy16199 731 ALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 731 a~~~l~~G-A~~Vqv~ta~l 749 (842)
+.+++..| ++.||+=-.-.
T Consensus 254 ~~~~i~~~~~d~v~ik~~~~ 273 (375)
T 1r0m_A 254 ARKALALGAGGVINLKVARV 273 (375)
T ss_dssp HHHHHHHTSCSEEEECTTTT
T ss_pred HHHHHHhCCCCEEEECcchh
Confidence 99999976 89999854443
No 476
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.89 E-value=0.046 Score=56.91 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=67.6
Q ss_pred CccEEEEe---cCCh------hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccc
Q psy16199 632 KIPFFVKL---TPNI------TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702 (842)
Q Consensus 632 ~~Pv~vKl---~p~~------~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~ 702 (842)
...|+.=+ +|.- .++.++|+..+++||++|.+.- ..+.+.|
T Consensus 58 ~~~vIaE~KraSPSkG~i~~~~dp~~~A~~y~~~GA~~IsVlt------------------------d~~~f~G------ 107 (272)
T 3tsm_A 58 QFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVLT------------------------DTPSFQG------ 107 (272)
T ss_dssp CCEEEEEECSEETTTEESCSSCCHHHHHHHHHHTTCSEEEEEC------------------------CSTTTCC------
T ss_pred CceEEEEeccCCCCCCccCCCCCHHHHHHHHHHCCCCEEEEec------------------------cccccCC------
Confidence 35677543 5542 2789999999999999998821 0111112
Q ss_pred hHHHHHHHHhhCCCCcEEEecCcCCHHHHHHHHHhCCCEEEEehhhh
Q psy16199 703 GLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQ 749 (842)
Q Consensus 703 al~~v~~i~~~~~~ipIi~~GGI~t~~da~~~l~~GA~~Vqv~ta~l 749 (842)
..+.+.++++.+ ++||+--..|.+..++.++..+|||+|-+..+.+
T Consensus 108 s~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 108 APEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp CHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred CHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 266788888888 7999999999999999999999999999999988
No 477
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=95.89 E-value=0.072 Score=58.32 Aligned_cols=123 Identities=18% Similarity=0.196 Sum_probs=90.9
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC--hhcHHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN--ITNITDIA 650 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~--~~~~~~~a 650 (842)
.+++++.+.++++.+.|++.+.++++ | ..+. +.+++||+.+ ++++.+..... ..+ .+++
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~-~------------~~d~----~~v~avr~a~~~~~l~vDan~~~~~~~-~~~~ 201 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIK-P------------GWDY----EVLKAVREAFPEATLTADANSAYSLAN-LAQL 201 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-T------------TBSH----HHHHHHHHHCTTSCEEEECTTCCCGGG-HHHH
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecC-h------------hHHH----HHHHHHHHHcCCCeEEEecCCCCCHHH-HHHH
Confidence 37888988888887889999999873 2 1233 4566677665 67899887543 457 8888
Q ss_pred HHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEEEecCcCCHHH
Q psy16199 651 KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADV 730 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi~~GGI~t~~d 730 (842)
+.+++.|++.|-= | +.|..+...+++++.. ++||++..-+.+..|
T Consensus 202 ~~l~~~~i~~iEq-----------------P-----------------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 246 (369)
T 2zc8_A 202 KRLDELRLDYIEQ-----------------P-----------------LAYDDLLDHAKLQREL-STPICLDESLTGAEK 246 (369)
T ss_dssp HGGGGGCCSCEEC-----------------C-----------------SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHH
T ss_pred HHHHhCCCcEEEC-----------------C-----------------CCcccHHHHHHHHhhC-CCCEEEcCccCCHHH
Confidence 8888888776541 1 1122255667788887 699999999999999
Q ss_pred HHHHHHhC-CCEEEEehhhh
Q psy16199 731 ALQFIQAG-AHAVQICSAVQ 749 (842)
Q Consensus 731 a~~~l~~G-A~~Vqv~ta~l 749 (842)
+.+++..| ++.||+=-.-.
T Consensus 247 ~~~~i~~~~~d~v~ik~~~~ 266 (369)
T 2zc8_A 247 ARKAIELGAGRVFNVKPARL 266 (369)
T ss_dssp HHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHhCCCCEEEEchhhh
Confidence 99999977 89999854444
No 478
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=95.88 E-value=0.29 Score=53.66 Aligned_cols=147 Identities=12% Similarity=0.047 Sum_probs=101.2
Q ss_pred cceEEEeccCCCHhH-HHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEec
Q psy16199 564 SILIASIMCTYNKDD-WLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLT 640 (842)
Q Consensus 564 ~pvi~si~~g~~~e~-~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~ 640 (842)
.|+-.++..+ ++++ ..++.+.+++.|+..+-+.++. .+++.-.+.+++||+.+ ++++.+...
T Consensus 137 v~~~~t~~~~-~~~~~~~~~~~~~~~~G~~~~KiKvg~--------------~~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLASG-DTAKDIAEGEKLLAEGRHRAFKLKIGA--------------RELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECSS-CHHHHHHHHHHHTC----CEEEEECCS--------------SCHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecCC-ChHHHHHHHHHHHHhCCCCEEEEecCC--------------CChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 4555555434 4444 5555555554689999998743 23566678899999987 478888886
Q ss_pred CChh--cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 641 PNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 641 p~~~--~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
..++ +..++++.+++.++..|= .| +.|-.++..+++++.. ++|
T Consensus 202 ~~~~~~~A~~~~~~l~~~~i~~iE-----------------eP-----------------~~~~d~~~~~~l~~~~-~ip 246 (381)
T 3fcp_A 202 QAWDAATGAKGCRELAAMGVDLIE-----------------QP-----------------VSAHDNAALVRLSQQI-ETA 246 (381)
T ss_dssp TCBCHHHHHHHHHHHHHTTCSEEE-----------------CC-----------------BCTTCHHHHHHHHHHS-SSE
T ss_pred CCCCHHHHHHHHHHHhhcCcccee-----------------CC-----------------CCcccHHHHHHHHHhC-CCC
Confidence 6554 677889999998877652 11 1223367788888888 699
Q ss_pred EEEecCcCCHHHHHHHHHhC-CCEEEEehhhhccCchhHHHHHH
Q psy16199 719 ILGIGGIDSADVALQFIQAG-AHAVQICSAVQNQDFTVVDDYIT 761 (842)
Q Consensus 719 Ii~~GGI~t~~da~~~l~~G-A~~Vqv~ta~l~~gp~~~~~i~~ 761 (842)
|++.--+.+..|+.+++..| ++.||+--.-. .|..-..++.+
T Consensus 247 Ia~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~-GGit~~~~ia~ 289 (381)
T 3fcp_A 247 ILADEAVATAYDGYQLAQQGFTGAYALKIAKA-GGPNSVLALAR 289 (381)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECHHHH-TSTTHHHHHHH
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEeccccc-CCHHHHHHHHH
Confidence 99999999999999999964 89999876666 45554544433
No 479
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.85 E-value=0.016 Score=63.90 Aligned_cols=90 Identities=12% Similarity=0.235 Sum_probs=61.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCc-EEEEEEeecCcc-----cc------CCHHHH-----HH-HHhcCcEEecCCCceE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGAN-KVLVVFRKGCTN-----IR------AVPEEV-----QL-AWEEKCEFLPFMSPVQ 210 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~-~Vtlv~r~~~~~-----~~------~~~~~~-----~~-~~~~gV~i~~~~~v~~ 210 (842)
+|+|||||..|+.+|..|.+.|.+ +|+++++..... ++ .....+ .. +.+.+++++.++.++.
T Consensus 6 dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 85 (384)
T 2v3a_A 6 PLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVTG 85 (384)
T ss_dssp CEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCCCE
T ss_pred cEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEEEE
Confidence 499999999999999999998853 489998754110 10 111111 22 3467999999988888
Q ss_pred EEccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 211 VDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 211 v~~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
+......+ .+. + .++.+|.+|+|+|.+|
T Consensus 86 i~~~~~~v---~~~--------------~--~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 86 IDPGHQRI---WIG--------------E--EEVRYRDLVLAWGAEP 113 (384)
T ss_dssp EEGGGTEE---EET--------------T--EEEECSEEEECCCEEE
T ss_pred EECCCCEE---EEC--------------C--cEEECCEEEEeCCCCc
Confidence 86433222 221 1 2689999999999984
No 480
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.83 E-value=0.032 Score=63.56 Aligned_cols=32 Identities=34% Similarity=0.619 Sum_probs=29.3
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||+.|+.+|..|++.|.+ |+|+++++
T Consensus 27 dVvVIGgG~aGl~aA~~la~~G~~-V~liEk~~ 58 (491)
T 3urh_A 27 DLIVIGSGPGGYVCAIKAAQLGMK-VAVVEKRS 58 (491)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEecCC
Confidence 499999999999999999999976 99999764
No 481
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.83 E-value=0.016 Score=70.71 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+-+|..|++.|..+|+|++++.
T Consensus 6 dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 6 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 499999999999999999999973499999764
No 482
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.80 E-value=0.21 Score=51.52 Aligned_cols=148 Identities=14% Similarity=0.132 Sum_probs=92.2
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhh----CCccEEE--
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS----VKIPFFV-- 637 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~----~~~Pv~v-- 637 (842)
.+||+-+-.+.-+.-....++.+.+.|+|++.+|-.. ..+.++..++.+++. ...|.++
T Consensus 57 ~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~---------------G~~~~~aa~~~~~~~~~~g~~~~~li~V 121 (259)
T 3tfx_A 57 YKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALG---------------GSQMIKSAKDGLIAGTPAGHSVPKLLAV 121 (259)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG---------------CHHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred CcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCC---------------CHHHHHHHHHHHHHhcccCCCCceEEEE
Confidence 5778777765445555666777778899999998421 135566666666543 1234232
Q ss_pred -Eec-CC---h----------h-cHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCcccc
Q psy16199 638 -KLT-PN---I----------T-NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701 (842)
Q Consensus 638 -Kl~-p~---~----------~-~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p 701 (842)
.++ ++ + . .+.++|+.+.++|++|++++ |
T Consensus 122 t~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s------------------------------------~ 165 (259)
T 3tfx_A 122 TELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICS------------------------------------P 165 (259)
T ss_dssp CSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECC------------------------------------G
T ss_pred EEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEEC------------------------------------H
Confidence 332 22 1 1 23478888899999999982 1
Q ss_pred chHHHHHHHHhhCCCCcEEEecCcCCHH----H------HHHHHHhCCCEEEEehhhhccC-c-hhHHHHHHHHHH
Q psy16199 702 MGLKAVSSIAKMFPNFPILGIGGIDSAD----V------ALQFIQAGAHAVQICSAVQNQD-F-TVVDDYITGLQT 765 (842)
Q Consensus 702 ~al~~v~~i~~~~~~ipIi~~GGI~t~~----d------a~~~l~~GA~~Vqv~ta~l~~g-p-~~~~~i~~~l~~ 765 (842)
.-+ ..+++.+++-.++.+.||+-.- | +.+++.+|||.+-+||++.... | ..++++++++++
T Consensus 166 ~e~---~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~ 238 (259)
T 3tfx_A 166 LEV---KKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNA 238 (259)
T ss_dssp GGH---HHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTC
T ss_pred HHH---HHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHH
Confidence 112 3445555445578889987431 2 6788899999999999998532 3 344555555443
No 483
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.79 E-value=0.1 Score=53.57 Aligned_cols=133 Identities=16% Similarity=0.095 Sum_probs=80.1
Q ss_pred ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhh--C--Ccc-EE-EE
Q psy16199 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSS--V--KIP-FF-VK 638 (842)
Q Consensus 565 pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~--~--~~P-v~-vK 638 (842)
+++.-+-.+..++....+++.+.++|||+|.+|.... .+.+...++.+++. . +.| ++ +.
T Consensus 57 ~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~g---------------~~~l~~~~~~~~~~~~~G~~~~~~lav~ 121 (246)
T 2yyu_A 57 AVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAGG---------------RRMMEAAIEGLDAGTPSGRMRPRCIAVT 121 (246)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGC---------------HHHHHHHHHHHHHHSCSSSCCCEEEEES
T ss_pred eEEEEeecccchHHHHHHHHHHHhcCCCEEEEECCCC---------------HHHHHHHHHHHHhhcccCCcCCCEEEEE
Confidence 4555554444456655567777778999999985321 34456777888762 2 346 33 33
Q ss_pred e-cCC-hhcH-----------H---HHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccc
Q psy16199 639 L-TPN-ITNI-----------T---DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702 (842)
Q Consensus 639 l-~p~-~~~~-----------~---~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~ 702 (842)
. ++. ..++ . .++....+.|.++++. .
T Consensus 122 ~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~--------------------------------------~ 163 (246)
T 2yyu_A 122 QLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVC--------------------------------------S 163 (246)
T ss_dssp SCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEEC--------------------------------------C
T ss_pred eCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEe--------------------------------------C
Confidence 2 221 1111 1 1122234566666543 1
Q ss_pred hHHHHHHHHhhCCCCcEEEecCcCCH-H---------HHHHHHHhCCCEEEEehhhhcc
Q psy16199 703 GLKAVSSIAKMFPNFPILGIGGIDSA-D---------VALQFIQAGAHAVQICSAVQNQ 751 (842)
Q Consensus 703 al~~v~~i~~~~~~ipIi~~GGI~t~-~---------da~~~l~~GA~~Vqv~ta~l~~ 751 (842)
+++ ++++++..+..+|+..|||.-- . .+.+++.+||+.+-+||+++..
T Consensus 164 ~~e-i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 221 (246)
T 2yyu_A 164 ANE-AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRA 221 (246)
T ss_dssp HHH-HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTS
T ss_pred HHH-HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCC
Confidence 244 6667666544569999999632 1 3777889999999999999954
No 484
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=95.74 E-value=0.29 Score=52.54 Aligned_cols=154 Identities=10% Similarity=0.118 Sum_probs=100.1
Q ss_pred cceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecC-C
Q psy16199 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTP-N 642 (842)
Q Consensus 564 ~pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p-~ 642 (842)
.+++.+.+ +.+. ++.+++.++|++.|- + ++ .++..+++++- .+++||++|... +
T Consensus 92 i~~~st~f---D~~s----vd~l~~~~v~~~KI~--S------~~-----~~N~pLL~~va-----~~gKPviLstGmst 146 (350)
T 3g8r_A 92 FKAICTPF---DEES----VDLIEAHGIEIIKIA--S------CS-----FTDWPLLERIA-----RSDKPVVASTAGAR 146 (350)
T ss_dssp CEEEEEEC---SHHH----HHHHHHTTCCEEEEC--S------SS-----TTCHHHHHHHH-----TSCSCEEEECTTCC
T ss_pred CcEEeccC---CHHH----HHHHHHcCCCEEEEC--c------cc-----ccCHHHHHHHH-----hhCCcEEEECCCCC
Confidence 56777774 4443 334455579999982 1 22 37777766554 368999999743 5
Q ss_pred hhcHHHHHHHHHHCCCCEEEE--ecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCcEE
Q psy16199 643 ITNITDIAKAAYEGKADGVSA--INTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPIL 720 (842)
Q Consensus 643 ~~~~~~~a~~~~~~G~d~i~v--~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ipIi 720 (842)
+.++...++.+.+.|.+ |++ .++.++. +....-++.|..+++.+|++||-
T Consensus 147 l~Ei~~Ave~i~~~g~~-viLlhC~s~YPt---------------------------~~~~~nL~aI~~Lk~~fp~lpVG 198 (350)
T 3g8r_A 147 REDIDKVVSFMLHRGKD-LTIMHCVAEYPT---------------------------PDDHLHLARIKTLRQQYAGVRIG 198 (350)
T ss_dssp HHHHHHHHHHHHTTTCC-EEEEECCCCSSC---------------------------CGGGCCTTHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHHHHHcCCC-EEEEecCCCCCC---------------------------CcccCCHHHHHHHHHHCCCCCEE
Confidence 66778888888888877 555 3332211 01223478888999998779987
Q ss_pred Ee----cCcCCHHHHHHHHHhCCCEEEEehhhhc-c--------CchhHHHHHHHHHHHHHhcCC
Q psy16199 721 GI----GGIDSADVALQFIQAGAHAVQICSAVQN-Q--------DFTVVDDYITGLQTLLYLKST 772 (842)
Q Consensus 721 ~~----GGI~t~~da~~~l~~GA~~Vqv~ta~l~-~--------gp~~~~~i~~~l~~~m~~~g~ 772 (842)
.+ |+.. .-+..++++||+.|-.--.+=. . .|.-+.+|.+.++..-...|.
T Consensus 199 ~SdHt~g~~~--~~~~AAvAlGA~vIEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~ 261 (350)
T 3g8r_A 199 YSTHEDPDLM--EPIMLAVAQGATVFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGD 261 (350)
T ss_dssp EEECCCSSCC--HHHHHHHHTTCCEEEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCcc--HHHHHHHHcCCCEEEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 66 3331 3456888999998876433322 1 277788888888876666654
No 485
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.73 E-value=0.032 Score=62.39 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=29.3
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||||..|+-+|..|++.|.++|+|+++..
T Consensus 8 dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 8 SLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 499999999999999999999973499998764
No 486
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.67 E-value=0.019 Score=65.01 Aligned_cols=32 Identities=25% Similarity=0.486 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||..|+.+|..|++.|.+ |+|+++.+
T Consensus 4 dvvIIGgG~aGl~aA~~l~~~g~~-V~lie~~~ 35 (468)
T 2qae_A 4 DVVVIGGGPGGYVASIKAAQLGMK-TACVEKRG 35 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCC
Confidence 499999999999999999999975 99999874
No 487
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.67 E-value=0.009 Score=66.36 Aligned_cols=30 Identities=30% Similarity=0.497 Sum_probs=28.2
Q ss_pred EEEEcCChhHHHHHHHHHHc--CCcEEEEEEee
Q psy16199 150 VIVLGAGDTAFDCATSALRC--GANKVLVVFRK 180 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~--G~~~Vtlv~r~ 180 (842)
|+|||||.+|+-+|..|++. |.+ |+|+++.
T Consensus 39 VvIIGaGi~Gls~A~~La~~~pG~~-V~vlE~~ 70 (405)
T 3c4n_A 39 IVVIGAGRMGAACAFYLRQLAPGRS-LLLVEEG 70 (405)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSC-EEEECSS
T ss_pred EEEECCcHHHHHHHHHHHhcCCCCe-EEEEeCC
Confidence 99999999999999999999 986 9999875
No 488
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.66 E-value=0.028 Score=63.82 Aligned_cols=30 Identities=17% Similarity=0.478 Sum_probs=27.9
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEee
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~ 180 (842)
|+|||+|..|+-+|..|++.|.+ |+|+++.
T Consensus 2 VvVIG~G~AGl~aA~~la~~G~~-V~viek~ 31 (472)
T 2e5v_A 2 IYIIGSGIAGLSAGVALRRAGKK-VTLISKR 31 (472)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEeCC
Confidence 89999999999999999999975 9999876
No 489
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=95.66 E-value=0.034 Score=65.37 Aligned_cols=57 Identities=14% Similarity=0.266 Sum_probs=42.3
Q ss_pred CcEEecCCCceEEEccC--CcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCcCChhHHhhc
Q psy16199 199 KCEFLPFMSPVQVDVKD--NKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAI 266 (842)
Q Consensus 199 gV~i~~~~~v~~v~~~~--~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~~~~~l~~~l 266 (842)
|+++++++.++++..++ +++.+|++.+.. +|+..++.+|.||+|+|.. ++..++...
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~----------~g~~~~i~A~~VIlaaG~~-~s~~lL~~s 332 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLI----------SGDRFEIKADVYVLTAGAV-HNTQLLVNS 332 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETT----------TCCEEEECEEEEEECSCTT-HHHHHHHTT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcC----------CCcEEEEECCEEEEcCCCc-CCHHHHHhc
Confidence 67888888888887433 378888877521 3566789999999999998 676666543
No 490
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.64 E-value=0.42 Score=49.82 Aligned_cols=87 Identities=18% Similarity=0.183 Sum_probs=67.2
Q ss_pred eEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecCC--
Q psy16199 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTPN-- 642 (842)
Q Consensus 566 vi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p~-- 642 (842)
+++++. +.+.++....++.+...|+|+||+-+..=.. ..+.+.+.+.++.+|+.. ++|+++=+.+.
T Consensus 42 i~v~l~-~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~----------~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~e 110 (276)
T 3o1n_A 42 IIVSLM-GKTITDVKSEALAYREADFDILEWRVDHFAN----------VTTAESVLEAAGAIREIITDKPLLFTFRSAKE 110 (276)
T ss_dssp EEEEEC-CSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT----------TTCHHHHHHHHHHHHHHCCSSCEEEECCBGGG
T ss_pred EEEEeC-CCCHHHHHHHHHHHhhCCCCEEEEEeccccc----------cCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhh
Confidence 677886 6789999999998887799999997754211 134578999999999987 79999977531
Q ss_pred -------hhcHHHHHHHHHHCC-CCEEEE
Q psy16199 643 -------ITNITDIAKAAYEGK-ADGVSA 663 (842)
Q Consensus 643 -------~~~~~~~a~~~~~~G-~d~i~v 663 (842)
-....++.+.+.+.| +|.|++
T Consensus 111 GG~~~~~~~~~~~ll~~~l~~g~~dyIDv 139 (276)
T 3o1n_A 111 GGEQALTTGQYIDLNRAAVDSGLVDMIDL 139 (276)
T ss_dssp TCSBCCCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 224567788888888 999998
No 491
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=95.62 E-value=0.18 Score=50.86 Aligned_cols=153 Identities=10% Similarity=0.026 Sum_probs=96.1
Q ss_pred c-ceEEEeccCCCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC-CccEEEEecC
Q psy16199 564 S-ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV-KIPFFVKLTP 641 (842)
Q Consensus 564 ~-pvi~si~~g~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~-~~Pv~vKl~p 641 (842)
. +||+-+-.+.-+.-...+++.+.+. |++.+|-...+ .+.++..++...+.- .+=++..++.
T Consensus 53 ~~~VflDlK~~DI~nTv~~~~~~~~~~--d~vTVh~~~G~--------------~~~~~~a~~~~~~~~~~v~vLts~s~ 116 (222)
T 4dbe_A 53 VEEIIVDFKLADIGYIMKSIVERLSFA--NSFIAHSFIGV--------------KGSLDELKRYLDANSKNLYLVAVMSH 116 (222)
T ss_dssp CSEEEEEEEECSCHHHHHHHHTTCTTC--SEEEEESTTCT--------------TTTHHHHHHHHHHTTCEEEEEEECSS
T ss_pred CCeEEEEeeecchHHHHHHHHHHHHhC--CEEEEEcCcCc--------------HHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 5 7777776543344445555555543 99999843220 123444455444321 2223334432
Q ss_pred -Ch--hcHHHHHHHHHHCCCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchHHHHHHHHhhCCCCc
Q psy16199 642 -NI--TNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFP 718 (842)
Q Consensus 642 -~~--~~~~~~a~~~~~~G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al~~v~~i~~~~~~ip 718 (842)
+. .....+++.+.++|++|++++.| .| .-++.+++.+++ .
T Consensus 117 ~~~~~~~~~~~a~~a~~~g~~GvV~sat---------------------------------~p---~e~~~ir~~~~~-~ 159 (222)
T 4dbe_A 117 EGWSTLFADYIKNVIREISPKGIVVGGT---------------------------------KL---DHITQYRRDFEK-M 159 (222)
T ss_dssp TTCCCTTHHHHHHHHHHHCCSEEEECTT---------------------------------CH---HHHHHHHHHCTT-C
T ss_pred cchHHHHHHHHHHHHHHhCCCEEEECCC---------------------------------CH---HHHHHHHHhCCC-C
Confidence 22 12378999999999999998432 12 335567777766 7
Q ss_pred EEEecCcCCH-HHHHHHHHhCCCEEEEehhhhcc-Cc-hhHHHHHHHHHHHHHh
Q psy16199 719 ILGIGGIDSA-DVALQFIQAGAHAVQICSAVQNQ-DF-TVVDDYITGLQTLLYL 769 (842)
Q Consensus 719 Ii~~GGI~t~-~da~~~l~~GA~~Vqv~ta~l~~-gp-~~~~~i~~~l~~~m~~ 769 (842)
++.++||.-. .+..+++.+|||.+-|||++... +| ...++++++++.++..
T Consensus 160 ~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 160 TIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDKVMK 213 (222)
T ss_dssp EEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 8889999642 15667788999999999999953 24 4577888888876654
No 492
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.62 E-value=0.026 Score=65.30 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=29.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||.+|+.+|..|.+.|.+ |+|+++++
T Consensus 18 dVvIIGaG~aGl~aA~~L~~~G~~-v~iiE~~~ 49 (542)
T 1w4x_A 18 DVLVVGAGFSGLYALYRLRELGRS-VHVIETAG 49 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 399999999999999999999985 99999864
No 493
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.62 E-value=0.035 Score=64.16 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=28.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
.|+|||+|..|+-+|..|++ |.+ |+|+++..
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G~~-V~vlEk~~ 40 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-QHQ-VIVLSKGP 40 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-TSC-EEEECSSC
T ss_pred CEEEECccHHHHHHHHHHhc-CCc-EEEEECCC
Confidence 39999999999999999999 875 99998765
No 494
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.60 E-value=0.024 Score=61.71 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=28.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 148 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 148 ~kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
..|+|||||.+|+-+|..|+ .|.+ |+|+++.+
T Consensus 10 ~dv~IIGaGi~Gls~A~~La-~G~~-V~vlE~~~ 41 (381)
T 3nyc_A 10 ADYLVIGAGIAGASTGYWLS-AHGR-VVVLEREA 41 (381)
T ss_dssp CSEEEECCSHHHHHHHHHHT-TTSC-EEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHh-CCCC-EEEEECCC
Confidence 34999999999999999999 5875 99999874
No 495
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.57 E-value=0.0089 Score=68.35 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=61.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc---------c---cCCHHH-HHHHH---hcCcEEecCCCceEEE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN---------I---RAVPEE-VQLAW---EEKCEFLPFMSPVQVD 212 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~---------~---~~~~~~-~~~~~---~~gV~i~~~~~v~~v~ 212 (842)
+|+|||||..|+.+|..|.+. . +|+|+++.+... . +....+ ...+. +.+++++.++.+..+.
T Consensus 110 dVvIIGgG~aGl~aA~~L~~~-~-~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i~ 187 (493)
T 1y56_A 110 DVAIIGGGPAGIGAALELQQY-L-TVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGVF 187 (493)
T ss_dssp SCCEECCSHHHHHHHHHHTTT-C-CEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCCE
T ss_pred CEEEECccHHHHHHHHHHHhc-C-CEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEEE
Confidence 499999999999999999988 5 599999875320 0 101111 22222 4588988888777765
Q ss_pred ccCCcEEEEEEEeecccCCCCeeccCCceEEEECCEEEEccccCc
Q psy16199 213 VKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 213 ~~~~~v~~V~~~~~~~~~~G~~~~~~g~~~~i~~D~Vi~a~G~~~ 257 (842)
..+..+. +...+ +++..++.+|.+|+|+|..|
T Consensus 188 ~~~~~~~-~~~~~------------~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 188 DKGEYFL-VPVVR------------GDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp ECSSSEE-EEEEE------------TTEEEEEEESCEEECCCEEE
T ss_pred cCCcEEE-EEEec------------CCeEEEEECCEEEECCCCCc
Confidence 3333332 11111 23445789999999999873
No 496
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.56 E-value=0.37 Score=50.67 Aligned_cols=157 Identities=15% Similarity=0.193 Sum_probs=96.2
Q ss_pred HHHHhhcCcCEEEEecc-CC-CCCCCCCCcccCCCCHHHHHHHHHHHHhhCCccEEEEecCCh----hcHHHHHHHHHHC
Q psy16199 583 SKKTEKAGADALELNLS-CP-HGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNI----TNITDIAKAAYEG 656 (842)
Q Consensus 583 a~~~~~agaD~ielN~s-cP-~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~~~Pv~vKl~p~~----~~~~~~a~~~~~~ 656 (842)
|+.++++|+|+|=+.=+ .- ...+..+. ..-..+.+...++.|.+.+++||++-+.-.+ .++.+.++.+.++
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~---~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~a 106 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDL---GISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKA 106 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSS---SCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCC---CCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHc
Confidence 56667789999988522 11 11122221 1356788889999999999999999994433 3677888889999
Q ss_pred CCCEEEEecCCCccccCCCCCCCCCcccCCCccccCCCCCCccccchH--HHHHHHHhhC--CCCcEEEecCcC------
Q psy16199 657 KADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGL--KAVSSIAKMF--PNFPILGIGGID------ 726 (842)
Q Consensus 657 G~d~i~v~nt~~~~~~~~~~~~~~p~~~~~~~~~~gG~sG~~~~p~al--~~v~~i~~~~--~~ipIi~~GGI~------ 726 (842)
|+++|.+=.... ....|-+.|+.+.|... +.|+.+++.- +++-|++=-.-.
T Consensus 107 Ga~gv~iEd~~~-------------------~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~ 167 (295)
T 1xg4_A 107 GAAGLHIEDQVG-------------------AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLD 167 (295)
T ss_dssp TCSEEEEECBCS-------------------SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHH
T ss_pred CCeEEEECCCCC-------------------CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHH
Confidence 999999833211 11234455676766543 3555555543 234455533311
Q ss_pred -CHHHHHHHHHhCCCEEEEehhhhccCchhHHHHHHHHH
Q psy16199 727 -SADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQ 764 (842)
Q Consensus 727 -t~~da~~~l~~GA~~Vqv~ta~l~~gp~~~~~i~~~l~ 764 (842)
.-+++..+.++||++|.+-. + ..+..++++.+.+.
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~-~--~~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEA-I--TELAMYRQFADAVQ 203 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETT-C--CSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEeC-C--CCHHHHHHHHHHcC
Confidence 12345566679999997753 2 23456666666554
No 497
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.56 E-value=0.047 Score=63.72 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=28.6
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 150 VvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
|+|||+|..|+-+|..|++.|.+ |+|+++..
T Consensus 10 VvVVGaG~AGl~AA~~la~~G~~-V~vlEK~~ 40 (588)
T 2wdq_A 10 AVVIGAGGAGMRAALQISQSGQT-CALLSKVF 40 (588)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESSC
T ss_pred EEEECcCHHHHHHHHHHHHCCCc-EEEEecCC
Confidence 99999999999999999999985 99999763
No 498
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.54 E-value=0.14 Score=54.16 Aligned_cols=84 Identities=13% Similarity=0.134 Sum_probs=67.6
Q ss_pred CCHhHHHHHHHHHhhcCcCEEEEeccCCCCCCCCCCcccCCCCHHHHHHHHHHHHhhC--CccEEEEecC-ChhcHHHHH
Q psy16199 574 YNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTP-NITNITDIA 650 (842)
Q Consensus 574 ~~~e~~~~~a~~~~~agaD~ielN~scP~~~~~~~~G~~~~~~~~~~~~ii~~v~~~~--~~Pv~vKl~p-~~~~~~~~a 650 (842)
.+.+.+.++++.+.+.|+|+|-++=+ .|.....+.+.-.++++.+++.+ ++||++=+.. +..+..+++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la 91 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGT---------TGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQS 91 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST---------TTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHH
Confidence 46788999999998899999998621 23444467788889999998876 4899999876 456889999
Q ss_pred HHHHHCCCCEEEEecC
Q psy16199 651 KAAYEGKADGVSAINT 666 (842)
Q Consensus 651 ~~~~~~G~d~i~v~nt 666 (842)
+.+++.|+|++.+...
T Consensus 92 ~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 92 AEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhcCCCEEEEcCC
Confidence 9999999999999643
No 499
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.51 E-value=0.027 Score=63.79 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=29.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeec
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKG 181 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~ 181 (842)
+|+|||||..|+.+|..|++.|.+ |+|+++.+
T Consensus 8 dvvIIGaG~aGl~aA~~l~~~g~~-V~liE~~~ 39 (470)
T 1dxl_A 8 DVVIIGGGPGGYVAAIKAAQLGFK-TTCIEKRG 39 (470)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCC-EEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCC
Confidence 499999999999999999999975 99999874
No 500
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.50 E-value=0.03 Score=69.31 Aligned_cols=102 Identities=20% Similarity=0.200 Sum_probs=65.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCcEEEEEEeecCcc---c-------cCC-HHH-----HHHHHh-cCcEEecCCCceEE
Q psy16199 149 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTN---I-------RAV-PEE-----VQLAWE-EKCEFLPFMSPVQV 211 (842)
Q Consensus 149 kVvVIGgG~~g~e~A~~l~~~G~~~Vtlv~r~~~~~---~-------~~~-~~~-----~~~~~~-~gV~i~~~~~v~~v 211 (842)
+|+|||+|+.|+.+|..|.+.|.+ |+|+++.+... . +.. ..+ .+.+.+ .+++++.++.+..+
T Consensus 130 dVvVIGaGpAGl~AA~~la~~G~~-V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 130 DVLVVGAGPAGLAAAREASRSGAR-VMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCc-EEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 399999999999999999999975 99999865221 1 100 111 223344 39999999888888
Q ss_pred EccCCcEEEEEEEeecccCCCCeecc-----CCceEEEECCEEEEccccCc
Q psy16199 212 DVKDNKIAGMQFNRTEQNEKGEWVED-----EEQRIKLKANYIISAFGSTL 257 (842)
Q Consensus 212 ~~~~~~v~~V~~~~~~~~~~G~~~~~-----~g~~~~i~~D~Vi~a~G~~~ 257 (842)
. ..+.+..+.... +...+.. .+...++.+|.||+|||..|
T Consensus 209 ~-~~~~~~~v~~~~-----~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 209 Y-DANYLIAAQRRT-----VHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp E-TTTEEEEEEECS-----TTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred e-cCCceeeeEeec-----ccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 6 444443332111 0000100 12334789999999999873
Done!