Your job contains 1 sequence.
>psy16199
MSTAKVCLSKDPPDIEMSTAKVCLSKDLPDIERPVAALPDSSEIPQYRLPFDAVNFEVEL
VKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSK
TFLPRVATSSKKGLCGGCKKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRK
GCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQ
RIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL
SDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNP
FGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQG
SFLNIELISEKTAFIFFFLFQAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQ
INTPVETILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQA
ITFHPETHQAHVTDECTGCTLCLSILIASIMCTYNKDDWLELSKKTEKAGADALELNLSC
PHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADG
VSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPIL
GIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQTLLYLKSTQLKGWDGQ
SPPTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPRQ
LK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16199
(842 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|621218 - symbol:Dpyd "dihydropyrimidine dehydrogenase... 1297 1.1e-229 3
UNIPROTKB|O89000 - symbol:Dpyd "Dihydropyrimidine dehydro... 1297 1.1e-229 3
UNIPROTKB|Q28943 - symbol:DPYD "Dihydropyrimidine dehydro... 1271 5.9e-229 3
MGI|MGI:2139667 - symbol:Dpyd "dihydropyrimidine dehydrog... 1295 1.6e-228 3
UNIPROTKB|F1S550 - symbol:DPYD "Dihydropyrimidine dehydro... 1271 1.0e-226 2
UNIPROTKB|F1N549 - symbol:DPYD "Dihydropyrimidine dehydro... 1264 2.6e-226 3
ZFIN|ZDB-GENE-040426-2459 - symbol:dpydb "dihydropyrimidi... 1274 7.8e-225 3
UNIPROTKB|Q28007 - symbol:DPYD "Dihydropyrimidine dehydro... 1249 6.9e-224 3
UNIPROTKB|Q12882 - symbol:DPYD "Dihydropyrimidine dehydro... 1268 1.2e-223 2
UNIPROTKB|Q5R895 - symbol:DPYD "Dihydropyrimidine dehydro... 1269 3.1e-223 2
UNIPROTKB|E2RSQ9 - symbol:DPYD "Uncharacterized protein" ... 1238 2.5e-221 2
FB|FBgn0086450 - symbol:su(r) "suppressor of rudimentary"... 1202 9.2e-218 3
UNIPROTKB|E1BRA0 - symbol:DPYD "Uncharacterized protein" ... 1162 3.1e-214 2
UNIPROTKB|E1C4J1 - symbol:DPYD "Uncharacterized protein" ... 1142 4.0e-212 2
WB|WBGene00016103 - symbol:dpyd-1 species:6239 "Caenorhab... 1206 4.6e-212 3
UNIPROTKB|Q18164 - symbol:dpyd-1 "Dihydropyrimidine dehyd... 1206 4.6e-212 3
UNIPROTKB|F1M412 - symbol:F1M412 "Uncharacterized protein... 1148 8.3e-212 2
DICTYBASE|DDB_G0267966 - symbol:pyd1 "dihydropyrimidine d... 1126 4.1e-199 2
TIGR_CMR|SPO_1777 - symbol:SPO_1777 "dihydroorotate dehyd... 383 2.9e-49 3
UNIPROTKB|Q4KDN0 - symbol:PFL_2546 "Dihydroorotate dehydr... 392 5.2e-49 2
TAIR|locus:2088570 - symbol:PYD1 "pyrimidine 1" species:3... 370 1.3e-48 2
UNIPROTKB|Q8ZNL7 - symbol:preA "NAD-dependent dihydropyri... 335 1.0e-40 2
UNIPROTKB|P25889 - symbol:preA "NADH-dependent dihydropyr... 326 7.5e-40 2
UNIPROTKB|Q8X643 - symbol:preA "NAD-dependent dihydropyri... 326 7.5e-40 2
TIGR_CMR|BA_4023 - symbol:BA_4023 "dihydroorotate oxidase... 272 1.5e-22 1
TIGR_CMR|CHY_1497 - symbol:CHY_1497 "dihydroorotate dehyd... 269 3.2e-22 1
TIGR_CMR|GSU_3057 - symbol:GSU_3057 "glutamate synthase (... 283 8.6e-22 1
TIGR_CMR|DET_1372 - symbol:DET_1372 "dihydroorotate dehyd... 255 1.0e-20 1
UNIPROTKB|P54322 - symbol:pyrDB "Dihydroorotate dehydroge... 247 7.3e-20 1
TIGR_CMR|GSU_1755 - symbol:GSU_1755 "dihydroorotate dehyd... 239 5.2e-19 1
TIGR_CMR|CHY_1991 - symbol:CHY_1991 "glutamate synthase (... 254 1.5e-18 1
UNIPROTKB|P09832 - symbol:gltD "glutamate synthase, small... 250 4.6e-18 1
TIGR_CMR|DET_0038 - symbol:DET_0038 "glutamate synthase (... 245 1.6e-17 1
UNIPROTKB|Q9KPJ0 - symbol:VC_2377 "Glutamate synthase, sm... 226 2.1e-15 1
TIGR_CMR|VC_2377 - symbol:VC_2377 "glutamate synthase, sm... 226 2.1e-15 1
TIGR_CMR|SO_1324 - symbol:SO_1324 "glutamate synthase, sm... 224 3.5e-15 1
UNIPROTKB|P37127 - symbol:aegA species:83333 "Escherichia... 218 3.4e-14 1
UNIPROTKB|Q4KJI5 - symbol:gltD "Glutamate synthase, small... 214 4.5e-14 1
TIGR_CMR|CPS_4502 - symbol:CPS_4502 "glutamate synthase, ... 214 4.6e-14 1
UNIPROTKB|Q0C617 - symbol:gltD "Glutamate synthase, small... 211 1.0e-13 1
UNIPROTKB|Q46811 - symbol:ygfK "predicted oxidoreductase,... 173 3.2e-12 3
TIGR_CMR|CPS_2800 - symbol:CPS_2800 "dihydroorotate dehyd... 166 2.6e-11 2
UNIPROTKB|Q46820 - symbol:ygfT "fused predicted oxidoredu... 180 4.3e-10 1
TIGR_CMR|SPO_1776 - symbol:SPO_1776 "pyridine nucleotide-... 169 3.5e-09 1
TIGR_CMR|SO_2592 - symbol:SO_2592 "dihydroorotate dehydro... 152 1.2e-08 2
ZFIN|ZDB-GENE-030131-3157 - symbol:dhodh "dihydroorotate ... 145 2.3e-08 2
TIGR_CMR|DET_0123 - symbol:DET_0123 "pyridine nucleotide-... 166 6.4e-08 2
POMBASE|SPAC57A10.12c - symbol:ura3 "dihydroorotate dehyd... 148 9.9e-08 2
UNIPROTKB|Q9KT87 - symbol:rnfB "Electron transport comple... 138 2.4e-07 1
TIGR_CMR|VC_1016 - symbol:VC_1016 "RnfB-related protein" ... 138 2.4e-07 1
TIGR_CMR|SPO_3770 - symbol:SPO_3770 "glutamate synthase, ... 151 3.7e-07 1
TIGR_CMR|CJE_0895 - symbol:CJE_0895 "dihydroorotate dehyd... 109 4.4e-07 2
TIGR_CMR|SO_0988 - symbol:SO_0988 "formate dehydrogenase,... 139 4.7e-07 2
UNIPROTKB|P96219 - symbol:gltD "Glutamate synthase [NADPH... 149 6.4e-07 1
UNIPROTKB|P65908 - symbol:pyrD "Dihydroorotate dehydrogen... 138 6.9e-07 2
TIGR_CMR|SPO_2907 - symbol:SPO_2907 "dihydroorotate dehyd... 129 7.7e-07 2
UNIPROTKB|Q5ZHY0 - symbol:DHODH "Uncharacterized protein"... 125 1.9e-06 2
MGI|MGI:1928378 - symbol:Dhodh "dihydroorotate dehydrogen... 136 2.2e-06 2
TIGR_CMR|CPS_0762 - symbol:CPS_0762 "glutamate synthase, ... 99 2.2e-06 2
UNIPROTKB|Q74FU5 - symbol:sfrB "NADPH oxidoreductase, bet... 137 2.7e-06 2
TIGR_CMR|GSU_0510 - symbol:GSU_0510 "Fe(III) reductase, b... 137 2.7e-06 2
TIGR_CMR|CBU_0971 - symbol:CBU_0971 "dihydroorotate dehyd... 125 3.3e-06 2
SGD|S000001699 - symbol:URA1 "Dihydroorotate dehydrogenas... 138 4.2e-06 1
TIGR_CMR|NSE_0179 - symbol:NSE_0179 "dihydroorotate dehyd... 104 6.1e-06 2
UNIPROTKB|P0A7E1 - symbol:pyrD "dihydroorotate dehydrogen... 136 7.5e-06 2
WB|WBGene00020932 - symbol:dhod-1 species:6239 "Caenorhab... 122 7.9e-06 2
CGD|CAL0005359 - symbol:URA1 species:5476 "Candida albica... 138 1.0e-05 2
UNIPROTKB|Q874I4 - symbol:URA9 "Dihydroorotate dehydrogen... 138 1.0e-05 2
RGD|68352 - symbol:Dhodh "dihydroorotate dehydrogenase (q... 126 1.3e-05 2
UNIPROTKB|Q9KRZ2 - symbol:pyrD "Dihydroorotate dehydrogen... 123 2.0e-05 2
TIGR_CMR|VC_1491 - symbol:VC_1491 "dihydroorotate dehydro... 123 2.0e-05 2
TIGR_CMR|CHY_0746 - symbol:CHY_0746 "putative thiamine-ph... 132 2.7e-05 1
UNIPROTKB|Q5E9W3 - symbol:DHODH "Dihydroorotate dehydroge... 126 4.3e-05 2
TIGR_CMR|APH_1013 - symbol:APH_1013 "dihydroorotate dehyd... 127 8.9e-05 1
UNIPROTKB|Q83B23 - symbol:rnfB "Electron transport comple... 121 0.00011 1
TIGR_CMR|CBU_1696 - symbol:CBU_1696 "4Fe-4S binding domai... 121 0.00011 1
UNIPROTKB|I3NI32 - symbol:DHODH "Dihydroorotate dehydroge... 118 0.00012 2
UNIPROTKB|Q02127 - symbol:DHODH "Dihydroorotate dehydroge... 116 0.00020 2
UNIPROTKB|P76440 - symbol:preT "NADH-dependent dihydropyr... 100 0.00023 2
UNIPROTKB|E2RPD0 - symbol:DHODH "Uncharacterized protein"... 118 0.00023 2
FB|FBgn0000447 - symbol:Dhod "Dihydroorotate dehydrogenas... 123 0.00032 1
UNIPROTKB|Q60AS6 - symbol:MCA0768 "Putative uncharacteriz... 106 0.00035 2
UNIPROTKB|G8JKZ0 - symbol:G8JKZ0 "Uncharacterized protein... 120 0.00066 1
UNIPROTKB|Q8Z5A6 - symbol:preT "NAD-dependent dihydropyri... 88 0.00069 2
>RGD|621218 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0002058 "uracil binding" evidence=IDA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006145 "purine nucleobase catabolic process"
evidence=ISO] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISO;IDA;TAS] [GO:0006210 "thymine catabolic process"
evidence=ISO] [GO:0006212 "uracil catabolic process"
evidence=ISO;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISO;ISS] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IDA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;ISS;IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0019860
"uracil metabolic process" evidence=IDA] [GO:0042493 "response to
drug" evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=IDA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 1297 (461.6 bits), Expect = 1.1e-229, Sum P(3) = 1.1e-229
Identities = 262/435 (60%), Positives = 320/435 (73%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 187 SAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +S+ST ++T+ L+++GY A FIGIG P IFQGLT+ GFYT
Sbjct: 246 ELMKDLGVKIICGKSISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKGSKPGMCACHSPL--PSVRGAVIVLGAGDTAFDCATSALRCGARRVFIVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD KI GMQF RTEQ+E G WVEDE
Sbjct: 364 RKGFANIRAVPEEMELAKEEKCEFLPFLSPRKVIVKDGKIVGMQFVRTEQDETGNWVEDE 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
EQ ++LKA+ +IS FGS L D V+EA+ P+K +++G PEVN TM TS P VF GGD
Sbjct: 424 EQIVRLKADVVISPFGSVLDDPKVIEALSPIKFNRWGLPEVNPETMQTSEPWVFAGGDVV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVESVNDGK A+W+IH+YIQ + VP +P LP F + +DLVDISVE+ GL+FP
Sbjct: 484 GMANTTVESVNDGKQASWYIHEYIQAQYGALVPSQPTLPLFYTPVDLVDISVEMAGLRFP 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS LYGP
Sbjct: 544 NPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPLYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 918 (328.2 bits), Expect = 1.1e-229, Sum P(3) = 1.1e-229
Identities = 168/263 (63%), Positives = 209/263 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR SV++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 695 CRWVRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGSPWPSV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G+ K TTYGGVSG RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GSGKRTTYGGVSGTTIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L WDGQSPPT HQKGKP + G+
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQSPPTMSHQKGKPVPHIAELMGQ 874
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ ++ +++
Sbjct: 875 KLPSFGPYLERRKKILAASKIRE 897
Score = 310 (114.2 bits), Expect = 1.5e-165, Sum P(3) = 1.5e-165
Identities = 59/125 (47%), Positives = 88/125 (70%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q +P+FG Y + R+ ++ +++ +D + L ++ N+ + I ++KDVIG+++Q
Sbjct: 874 QKLPSFGPYLERRKKILAASKIRE--NDQNRACSPLQRKHFNSQ-KPIPAIKDVIGKSLQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CTGCT
Sbjct: 931 YLGTFGELNIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
Score = 41 (19.5 bits), Expect = 1.1e-229, Sum P(3) = 1.1e-229
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LS+D PDIE +A P
Sbjct: 5 LSRDAPDIESILALNP 20
Score = 37 (18.1 bits), Expect = 2.9e-229, Sum P(3) = 2.9e-229
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 8 LSKDPPDIE 16
LS+D PDIE
Sbjct: 5 LSRDAPDIE 13
>UNIPROTKB|O89000 [details] [associations]
symbol:Dpyd "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:10116 "Rattus norvegicus" [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 1297 (461.6 bits), Expect = 1.1e-229, Sum P(3) = 1.1e-229
Identities = 262/435 (60%), Positives = 320/435 (73%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 187 SAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +S+ST ++T+ L+++GY A FIGIG P IFQGLT+ GFYT
Sbjct: 246 ELMKDLGVKIICGKSISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKGSKPGMCACHSPL--PSVRGAVIVLGAGDTAFDCATSALRCGARRVFIVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD KI GMQF RTEQ+E G WVEDE
Sbjct: 364 RKGFANIRAVPEEMELAKEEKCEFLPFLSPRKVIVKDGKIVGMQFVRTEQDETGNWVEDE 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
EQ ++LKA+ +IS FGS L D V+EA+ P+K +++G PEVN TM TS P VF GGD
Sbjct: 424 EQIVRLKADVVISPFGSVLDDPKVIEALSPIKFNRWGLPEVNPETMQTSEPWVFAGGDVV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVESVNDGK A+W+IH+YIQ + VP +P LP F + +DLVDISVE+ GL+FP
Sbjct: 484 GMANTTVESVNDGKQASWYIHEYIQAQYGALVPSQPTLPLFYTPVDLVDISVEMAGLRFP 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS LYGP
Sbjct: 544 NPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPLYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 918 (328.2 bits), Expect = 1.1e-229, Sum P(3) = 1.1e-229
Identities = 168/263 (63%), Positives = 209/263 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR SV++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 695 CRWVRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGSPWPSV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G+ K TTYGGVSG RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GSGKRTTYGGVSGTTIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L WDGQSPPT HQKGKP + G+
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQSPPTMSHQKGKPVPHIAELMGQ 874
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ ++ +++
Sbjct: 875 KLPSFGPYLERRKKILAASKIRE 897
Score = 310 (114.2 bits), Expect = 1.5e-165, Sum P(3) = 1.5e-165
Identities = 59/125 (47%), Positives = 88/125 (70%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q +P+FG Y + R+ ++ +++ +D + L ++ N+ + I ++KDVIG+++Q
Sbjct: 874 QKLPSFGPYLERRKKILAASKIRE--NDQNRACSPLQRKHFNSQ-KPIPAIKDVIGKSLQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CTGCT
Sbjct: 931 YLGTFGELNIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
Score = 41 (19.5 bits), Expect = 1.1e-229, Sum P(3) = 1.1e-229
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LS+D PDIE +A P
Sbjct: 5 LSRDAPDIESILALNP 20
Score = 37 (18.1 bits), Expect = 2.9e-229, Sum P(3) = 2.9e-229
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 8 LSKDPPDIE 16
LS+D PDIE
Sbjct: 5 LSRDAPDIE 13
>UNIPROTKB|Q28943 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0010181 "FMN binding" evidence=IDA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IDA] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0050661 "NADP binding"
evidence=IDA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019483 "beta-alanine biosynthetic process"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0019483 GO:GO:0010181 GO:GO:0006222 DrugBank:DB00544
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 eggNOG:COG0167
EMBL:U09179 PIR:B54718 RefSeq:NP_999209.1 UniGene:Ssc.153 PDB:1GT8
PDB:1GTE PDB:1GTH PDB:1H7W PDB:1H7X PDBsum:1GT8 PDBsum:1GTE
PDBsum:1GTH PDBsum:1H7W PDBsum:1H7X ProteinModelPortal:Q28943
SMR:Q28943 STRING:Q28943 GeneID:397109 KEGG:ssc:397109
EvolutionaryTrace:Q28943 Uniprot:Q28943
Length = 1025
Score = 1271 (452.5 bits), Expect = 5.9e-229, Sum P(3) = 5.9e-229
Identities = 261/435 (60%), Positives = 317/435 (72%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P IFQGLT++ GFYT
Sbjct: 246 ELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKSSKAGMCACHSPL--PSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I +QF RTEQ+E G+W EDE
Sbjct: 364 RKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDE 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+ TM TS P VF GGD
Sbjct: 424 DQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVESVNDGK A+W+IHKYIQ + +V KP LP F + +DLVDISVE+ GLKF
Sbjct: 484 GMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGLKFI 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA PTT+SSM+RRAFE GWGFA+TKTFSL KD+VTNVSPRIV+GTTS +YGP
Sbjct: 544 NPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 940 (336.0 bits), Expect = 5.9e-229, Sum P(3) = 5.9e-229
Identities = 177/268 (66%), Positives = 214/268 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS + L+GWDGQSP T HQKGKP + + GK
Sbjct: 815 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+PNFG Y + R+ +I E + LK+ N+
Sbjct: 875 KLPNFGPYLEQRKKIIAEEKMRLKEQNA 902
Score = 328 (120.5 bits), Expect = 2.2e-164, Sum P(3) = 2.2e-164
Identities = 66/125 (52%), Positives = 88/125 (70%)
Query: 443 IPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+PNFG Y + R+ +I E + LK+ N+ L+ R+ P + I ++KDVIG+A+Q
Sbjct: 876 LPNFGPYLEQRKKIIAEEKMRLKEQNAAFPPLE-----RKPFIPKKPIPAIKDVIGKALQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 931 YLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
Score = 38 (18.4 bits), Expect = 5.9e-229, Sum P(3) = 5.9e-229
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LSKD+ DIE +A P
Sbjct: 5 LSKDVADIESILALNP 20
>MGI|MGI:2139667 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0002058 "uracil binding" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004152 "dihydroorotate dehydrogenase
activity" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006145 "purine
nucleobase catabolic process" evidence=ISO] [GO:0006208 "pyrimidine
nucleobase catabolic process" evidence=ISO;IDA] [GO:0006210
"thymine catabolic process" evidence=ISO] [GO:0006212 "uracil
catabolic process" evidence=ISO] [GO:0006214 "thymidine catabolic
process" evidence=ISO] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=ISO] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;IDA] [GO:0019860
"uracil metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=ISO] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO;IDA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 MGI:MGI:2139667 GO:GO:0005829 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI HSSP:Q28943 eggNOG:COG0167
GO:GO:0006210 EMBL:BC039699 IPI:IPI00229705 RefSeq:NP_740748.1
UniGene:Mm.27907 ProteinModelPortal:Q8CHR6 SMR:Q8CHR6 STRING:Q8CHR6
PhosphoSite:Q8CHR6 PaxDb:Q8CHR6 PRIDE:Q8CHR6
Ensembl:ENSMUST00000039177 GeneID:99586 KEGG:mmu:99586
UCSC:uc008rdh.1 InParanoid:Q8CHR6 NextBio:354029 Bgee:Q8CHR6
Genevestigator:Q8CHR6 Uniprot:Q8CHR6
Length = 1025
Score = 1295 (460.9 bits), Expect = 1.6e-228, Sum P(3) = 1.6e-228
Identities = 252/393 (64%), Positives = 304/393 (77%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE+EL+KDLGVKI C +SLST ++T+ L+++GY A FIGIG P
Sbjct: 228 TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSTDEMTLSSLKENGYRAAFIGIGLPE 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
IFQGLT+ GFYTSK FLP VA P ++G VIVLGAGDTAF
Sbjct: 288 PKKDHIFQGLTQVQGFYTSKDFLPLVAKSSKTGMCACHSPL--PSIRGAVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFLPF+SP +V VKD KI
Sbjct: 346 DCATSALRCGALRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKDGKIVA 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
MQF RTEQ+E G WVEDEEQ ++LKA+ +ISAFGS L D V EA+ P+K +++G PEVN
Sbjct: 406 MQFVRTEQDETGNWVEDEEQTVRLKADVVISAFGSVLEDPKVKEALSPIKFNRWGLPEVN 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM TS P VF GGD +++TTVESVNDGK A+W+IHK+IQ + +VP +P +P F
Sbjct: 466 PETMQTSEPWVFAGGDVVGMANTTVESVNDGKQASWYIHKHIQAQYGTSVPSQPTMPLFY 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ +DLVDISVE+ GL+FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTN
Sbjct: 526 TPVDLVDISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRI++GTTS LYGP Q SFLNIELISEKTA
Sbjct: 586 VSPRIIRGTTSGPLYGPGQSSFLNIELISEKTA 618
Score = 909 (325.0 bits), Expect = 1.6e-228, Sum P(3) = 1.6e-228
Identities = 168/263 (63%), Positives = 207/263 (78%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NILIASIMCSYNKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G + TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIGRRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L WDGQSPP HQKGKP + + G+
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELADWDGQSPPIISHQKGKPVPRVAELMGQ 874
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I +++
Sbjct: 875 KLPSFGPYLEQRKKIIAASKIRQ 897
Score = 310 (114.2 bits), Expect = 2.5e-165, Sum P(3) = 2.5e-165
Identities = 59/125 (47%), Positives = 87/125 (69%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q +P+FG Y + R+ +I +++ D + + L ++ N+ + I ++KDVIG+++Q
Sbjct: 874 QKLPSFGPYLEQRKKIIAASKIRQ--KDQNTACSPLQRKHFNSQ-KPIPAIKDVIGKSLQ 930
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + E+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CTGCT
Sbjct: 931 YLGTFGEMSIMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCTGCT 990
Query: 561 LCLSI 565
LCLS+
Sbjct: 991 LCLSV 995
Score = 46 (21.3 bits), Expect = 7.0e-97, Sum P(3) = 7.0e-97
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
+ + GAG + CA+ R G + + +F K
Sbjct: 190 IALFGAGPASISCASFLARLGYSNI-TIFEK 219
Score = 41 (19.5 bits), Expect = 1.6e-228, Sum P(3) = 1.6e-228
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LS+D PDIE +A P
Sbjct: 5 LSRDAPDIESILALNP 20
Score = 40 (19.1 bits), Expect = 7.9e-96, Sum P(3) = 7.9e-96
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 37 ALPDSSEIPQYRLPFDAVNFEVEL 60
++P +P + P D V+ VE+
Sbjct: 514 SVPSQPTMPLFYTPVDLVDISVEM 537
Score = 37 (18.1 bits), Expect = 4.1e-228, Sum P(3) = 4.1e-228
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 8 LSKDPPDIE 16
LS+D PDIE
Sbjct: 5 LSRDAPDIE 13
>UNIPROTKB|F1S550 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:CU138571 EMBL:CU151845 EMBL:CU179627 EMBL:CU179674
EMBL:CU179711 EMBL:CU207270 EMBL:FP017306
Ensembl:ENSSSCT00000007532 Uniprot:F1S550
Length = 949
Score = 1271 (452.5 bits), Expect = 1.0e-226, Sum P(2) = 1.0e-226
Identities = 261/435 (60%), Positives = 317/435 (72%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 111 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 169
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P IFQGLT++ GFYT
Sbjct: 170 ELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYT 229
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 230 SKDFLPLVAKSSKAGMCACHSPL--PSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVF 287
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I +QF RTEQ+E G+W EDE
Sbjct: 288 RKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDE 347
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+ TM TS P VF GGD
Sbjct: 348 DQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIV 407
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVESVNDGK A+W+IHKYIQ + +V KP LP F + +DLVDISVE+ GLKF
Sbjct: 408 GMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGLKFI 467
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA PTT+SSM+RRAFE GWGFA+TKTFSL KD+VTNVSPRIV+GTTS +YGP
Sbjct: 468 NPFGLASATPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPG 527
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 528 QSSFLNIELISEKTA 542
Score = 940 (336.0 bits), Expect = 1.0e-226, Sum P(2) = 1.0e-226
Identities = 177/268 (66%), Positives = 214/268 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 559 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 618
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 619 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 678
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 679 GAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 738
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS + L+GWDGQSP T HQKGKP + + GK
Sbjct: 739 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGK 798
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNS 828
+PNFG Y + R+ +I E + LK+ N+
Sbjct: 799 KLPNFGPYLEQRKKIIAEEKMRLKEQNA 826
Score = 328 (120.5 bits), Expect = 5.2e-162, Sum P(2) = 5.2e-162
Identities = 66/125 (52%), Positives = 88/125 (70%)
Query: 443 IPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+PNFG Y + R+ +I E + LK+ N+ L+ R+ P + I ++KDVIG+A+Q
Sbjct: 800 LPNFGPYLEQRKKIIAEEKMRLKEQNAAFPPLE-----RKPFIPKKPIPAIKDVIGKALQ 854
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 855 YLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCT 914
Query: 561 LCLSI 565
LCLS+
Sbjct: 915 LCLSV 919
>UNIPROTKB|F1N549 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 IPI:IPI00707298 UniGene:Bt.2424 GO:GO:0004158
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:DAAA02007797 EMBL:DAAA02007798 EMBL:DAAA02007799
EMBL:DAAA02007800 EMBL:DAAA02007801 EMBL:DAAA02007802
EMBL:DAAA02007803 EMBL:DAAA02007804 EMBL:DAAA02007805
EMBL:DAAA02007806 EMBL:DAAA02007807 EMBL:DAAA02007808
EMBL:DAAA02007809 ProteinModelPortal:F1N549
Ensembl:ENSBTAT00000007139 ArrayExpress:F1N549 Uniprot:F1N549
Length = 1025
Score = 1264 (450.0 bits), Expect = 2.6e-226, Sum P(3) = 2.6e-226
Identities = 261/435 (60%), Positives = 315/435 (72%)
Query: 3 TAK-VCLSKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK V L P I ++ L D+ E+ V L +SEIPQ+RLP D VNFE+
Sbjct: 187 SAKIVLLGAGPASISCASFLARLGYNDITIFEKQEYVGGL-STSEIPQFRLPHDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P IFQGLT++ GFYT
Sbjct: 246 ELMKDLGVKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPEPKKDHIFQGLTQDQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA ++GTVIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKSSKAGMCACHSPLLS--IRGTVIVLGAGDTAFDCATSALRCGARRVFIVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I MQF RTEQ+E G+W EDE
Sbjct: 364 RKGFVNIRAVPEEVELAREEKCEFLPFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDE 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
+Q + LKA+ +ISAFGS L D V EA+ P+K +++ PEV+ TM TS P VF GGD
Sbjct: 424 DQIVCLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDVV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVE+VNDGK A+W+IH+YIQ + +V KP LP F + IDLVDISVE+ GLKF
Sbjct: 484 GIANTTVEAVNDGKQASWYIHRYIQSQYGASVSAKPELPLFYTPIDLVDISVEMAGLKFT 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA PTT+SSM+RRAFE GW FA+TKTFSL KD+VTNVSPRI++GTTS +YGP
Sbjct: 544 NPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRIIRGTTSGPMYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 922 (329.6 bits), Expect = 2.6e-226, Sum P(3) = 2.6e-226
Identities = 175/282 (62%), Positives = 218/282 (77%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN++DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ GA +Q
Sbjct: 755 GREKRTTYGGVSGTAIRPIALRAVTTIARALPEFPILATGGIDSAESGLQFLHGGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFT++ DY TGL+ LLYLKS + L+ WDGQSP T HQKGKP + GK
Sbjct: 815 VCSAIQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQSPATKSHQKGKPVPCIAELVGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNG--LPRQ 840
+P+FG Y + R+ +I E L LKK N + L+ +P++
Sbjct: 875 KLPSFGPYLEKRKKIIAEEKLRLKKENVTVLPLERNHFIPKK 916
Score = 342 (125.4 bits), Expect = 4.1e-165, Sum P(3) = 4.1e-165
Identities = 69/124 (55%), Positives = 90/124 (72%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP-KRQINTPVETILSVKDVIGQAVQR 501
+P+FG Y + R+ +I E L+ L + V++ LP +R P + I SVKDVIG+A+Q
Sbjct: 876 LPSFGPYLEKRKKIIAEEKLR-LKKENVTV---LPLERNHFIPKKPIPSVKDVIGKALQY 931
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+ Y EL+N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCTL
Sbjct: 932 LGTYGELNNTEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCTL 991
Query: 562 CLSI 565
CLS+
Sbjct: 992 CLSV 995
Score = 38 (18.4 bits), Expect = 2.6e-226, Sum P(3) = 2.6e-226
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LSKD+ DIE +A P
Sbjct: 5 LSKDVADIESILALNP 20
Score = 38 (18.4 bits), Expect = 4.3e-97, Sum P(3) = 4.3e-97
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 574 YNKDDWLELSKKTEKAG 590
Y D+L L K+ KAG
Sbjct: 304 YTSKDFLPLVAKSSKAG 320
Score = 37 (18.1 bits), Expect = 5.7e-133, Sum P(3) = 5.7e-133
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 791 KPAYQFRDKEGKAIPNFGEYKKI 813
KP +D GKA+ G Y ++
Sbjct: 916 KPIPSVKDVIGKALQYLGTYGEL 938
>ZFIN|ZDB-GENE-040426-2459 [details] [associations]
symbol:dpydb "dihydropyrimidine dehydrogenase b"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0017113 "dihydropyrimidine dehydrogenase (NADP+)
activity" evidence=IEA;ISS] [GO:0006212 "uracil catabolic process"
evidence=ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF01180 Pfam:PF07992 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 ZFIN:ZDB-GENE-040426-2459 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 GO:GO:0009055 GO:GO:0046872
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 HOVERGEN:HBG004351 KO:K00207
OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:BC066602 IPI:IPI00502639
RefSeq:NP_998058.1 UniGene:Dr.161770 HSSP:Q28943
ProteinModelPortal:Q6NYG8 SMR:Q6NYG8 STRING:Q6NYG8 PRIDE:Q6NYG8
GeneID:405829 KEGG:dre:405829 CTD:405829 eggNOG:COG0167
InParanoid:Q6NYG8 NextBio:20817792 ArrayExpress:Q6NYG8
Uniprot:Q6NYG8
Length = 1022
Score = 1274 (453.5 bits), Expect = 7.8e-225, Sum P(3) = 7.8e-225
Identities = 245/393 (62%), Positives = 301/393 (76%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP++ V FE++L+KDLGVK+ E+ L +T+ L+++GY ++IGIG P
Sbjct: 228 TSEIPQFRLPYEVVQFEIDLMKDLGVKVVLEKGLGQNGLTLTSLKEEGYQVVYIGIGLPQ 287
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
AN IF+GLT E GFYTSK FLP VA P L G VIVLGAGDTAF
Sbjct: 288 ANRDKIFEGLTTEQGFYTSKDFLPLVAKASKIGMCNCRSQL--PKLHGNVIVLGAGDTAF 345
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA +V VVFRKG TNIRAVPEE++ A EEKCEFLPF+SP +V K+ +++G
Sbjct: 346 DCATSALRCGARRVFVVFRKGFTNIRAVPEEMEAAKEEKCEFLPFLSPHEVIKKNGRVSG 405
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++F RTEQ + G W+ DEEQ + LKA++IISAFGS L D V +A+ P+KL+++G PEVN
Sbjct: 406 LRFCRTEQQDDGTWIVDEEQIVHLKADFIISAFGSMLNDPAVTKALDPIKLNRWGTPEVN 465
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TM T+ P VF GGD A ++TTVESVNDGK A+WHIHKYIQ + T+ P LP F
Sbjct: 466 SETMQTTEPWVFAGGDIAGFANTTVESVNDGKQASWHIHKYIQSLHGNTISATPRLPLFH 525
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
ID VDISVE+CG+KFPNPFGLASAPPTT+++M+RRAFE GWGFA+TKTF L KD+VTN
Sbjct: 526 CSIDTVDISVEMCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFALTKTFGLDKDLVTN 585
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
VSPRIV+GTTS H++GP QGSFLNIELISEKTA
Sbjct: 586 VSPRIVRGTTSGHIFGPGQGSFLNIELISEKTA 618
Score = 899 (321.5 bits), Expect = 7.8e-225, Sum P(3) = 7.8e-225
Identities = 172/277 (62%), Positives = 207/277 (74%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN+ DW EL+K +++ ADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIIIASIMCSYNQADWTELAKMAQESQADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR + IPFF KLTPN+TNI DIA AAYEG ADGV+A NTVSGLM+L AD PWP +
Sbjct: 695 CRWVRKATSIPFFAKLTPNVTNIVDIATAAYEGGADGVTATNTVSGLMALKADATPWPGI 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ AGA +Q
Sbjct: 755 GRGARTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHAGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV++DY GL+ LLYLKS + L WDGQSPPT HQKGKP + GK
Sbjct: 815 VCSAVQNQDFTVIEDYCLGLKALLYLKSIEELHDWDGQSPPTIRHQKGKPVPHVSELIGK 874
Query: 803 AIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPR 839
++P+FG Y + + + + KK S V + G R
Sbjct: 875 SLPSFGPYLQTKTQALAKY--KKDASGDVIMDTGAAR 909
Score = 326 (119.8 bits), Expect = 2.2e-164, Sum P(3) = 2.2e-164
Identities = 62/125 (49%), Positives = 85/125 (68%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+++P+FG Y + + + + KK S V + G + +N P + I +VKDVI +A++
Sbjct: 874 KSLPSFGPYLQTKTQALAKY--KKDASGDVIMDTGAAR--VNIPKKPIPNVKDVIARALK 929
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ Y ELDN +QV AL++ +MCINCGKCYM CNDSGYQAI F PETH +TD CTGCT
Sbjct: 930 HIGAYQELDNTEQVQALVDPEMCINCGKCYMTCNDSGYQAIKFDPETHLPVITDSCTGCT 989
Query: 561 LCLSI 565
LCLS+
Sbjct: 990 LCLSV 994
Score = 44 (20.5 bits), Expect = 3.4e-95, Sum P(3) = 3.4e-95
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
+ ++G G + CA+ R G + + +F K
Sbjct: 190 IALIGCGPASISCASFLARLGYDNI-TIFEK 219
Score = 37 (18.1 bits), Expect = 7.8e-225, Sum P(3) = 7.8e-225
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LSK+L DIE +A P
Sbjct: 5 LSKELQDIESILALNP 20
>UNIPROTKB|Q28007 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;IDA] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0006212 "uracil
catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0050661 "NADP binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
EMBL:U20981 IPI:IPI00707298 PIR:A44626 RefSeq:NP_776466.1
UniGene:Bt.2424 ProteinModelPortal:Q28007 SMR:Q28007 STRING:Q28007
PRIDE:Q28007 GeneID:281124 KEGG:bta:281124 CTD:1806
HOGENOM:HOG000007797 HOVERGEN:HBG004351 InParanoid:Q28007 KO:K00207
OrthoDB:EOG44J2H8 NextBio:20805192 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 Uniprot:Q28007
Length = 1025
Score = 1249 (444.7 bits), Expect = 6.9e-224, Sum P(3) = 6.9e-224
Identities = 257/435 (59%), Positives = 313/435 (71%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V + +SEIPQ+RLP+D VNFE+
Sbjct: 187 SAKIALLGAGPASISCASFLARLGYNDITIFEKQEYVGGI-STSEIPQFRLPYDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS DIT+ L+++GY A FIGIG P IFQGLT++ GFYT
Sbjct: 246 ELMKDLGVKIICGKSLSVNDITLSTLKEEGYKAAFIGIGLPEPKKDHIFQGLTQDQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA ++GTVIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKSSKAGMCACHSPLLS--IRGTVIVLGAGDTAFDCATSALRCGARRVFIVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEEV+LA EEKCEFLPF+SP +V VK +I MQF RTEQ+E G+W ED
Sbjct: 364 RKGFVNIRAVPEEVELAREEKCEFLPFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDG 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
+Q LKA+ +ISAFGS L D V EA+ P+K +++ PEV+ TM TS P VF GGD
Sbjct: 424 DQIACLKADVVISAFGSVLSDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDVV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVE+VNDGK A+W+IH+YIQ + +V KP LP F + IDLVDISVE+ LKF
Sbjct: 484 GIANTTVEAVNDGKQASWYIHRYIQSQYGASVSAKPELPLFYTPIDLVDISVEMAALKFT 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA PTT+SSM+RRAFE GW FA+TKTFSL KD+VTNVSPRI++GTTS +YGP
Sbjct: 544 NPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRIIRGTTSGPMYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 914 (326.8 bits), Expect = 6.9e-224, Sum P(3) = 6.9e-224
Identities = 174/282 (61%), Positives = 217/282 (76%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YN++DW+ELS+K E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L ADG PWPAV
Sbjct: 695 CRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ GA +Q
Sbjct: 755 GREKRTTYGGVSGTAIRPIALRAVTTIARALPEFPILATGGIDSAESGLQFLHGGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFT++ DY TGL+ LLYLKS + L+ WDGQSP T HQKGKP + GK
Sbjct: 815 VCSAIQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQSPATKSHQKGKPVPCIAELVGK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLNSDGVSLQNG--LPRQ 840
+P+FG Y + + +I E L LKK N + L+ +P++
Sbjct: 875 KLPSFGPYLEKCKKIIAEEKLRLKKENVTVLPLERNHFIPKK 916
Score = 334 (122.6 bits), Expect = 1.1e-162, Sum P(3) = 1.1e-162
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP-KRQINTPVETILSVKDVIGQAVQR 501
+P+FG Y + + +I E L+ L + V++ LP +R P + I SVKDVIG+A+Q
Sbjct: 876 LPSFGPYLEKCKKIIAEEKLR-LKKENVTV---LPLERNHFIPKKPIPSVKDVIGKALQY 931
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+ Y EL+N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCTL
Sbjct: 932 LGTYGELNNTEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCTL 991
Query: 562 CLSI 565
CLS+
Sbjct: 992 CLSV 995
Score = 38 (18.4 bits), Expect = 6.9e-224, Sum P(3) = 6.9e-224
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 24 LSKDLPDIERPVAALP 39
LSKD+ DIE +A P
Sbjct: 5 LSKDVADIESILALNP 20
Score = 38 (18.4 bits), Expect = 3.0e-96, Sum P(3) = 3.0e-96
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 574 YNKDDWLELSKKTEKAG 590
Y D+L L K+ KAG
Sbjct: 304 YTSKDFLPLVAKSSKAG 320
Score = 37 (18.1 bits), Expect = 2.2e-131, Sum P(3) = 2.2e-131
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 791 KPAYQFRDKEGKAIPNFGEYKKI 813
KP +D GKA+ G Y ++
Sbjct: 916 KPIPSVKDVIGKALQYLGTYGEL 938
>UNIPROTKB|Q12882 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9606 "Homo sapiens" [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0019483 "beta-alanine biosynthetic process" evidence=IEA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IMP;IDA;TAS] [GO:0006212 "uracil catabolic process"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0042803 "protein homodimerization
activity" evidence=ISS;IDA] [GO:0006145 "purine nucleobase
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS;IMP] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] [GO:0050661 "NADP binding"
evidence=ISS] [GO:0006210 "thymine catabolic process" evidence=IDA]
[GO:0006214 "thymidine catabolic process" evidence=IDA] [GO:0006206
"pyrimidine nucleobase metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0046135
"pyrimidine nucleoside catabolic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005829 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0016491 GO:GO:0051539
EMBL:CH471097 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006145 DrugBank:DB01101 GO:GO:0006222 SUPFAM:SSF46548
CTD:1806 HOVERGEN:HBG004351 KO:K00207 OrthoDB:EOG44J2H8
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 eggNOG:COG0167 EMBL:U09178 EMBL:U20938
EMBL:AB003063 EMBL:BT006740 EMBL:AK291217 EMBL:AL356457
EMBL:AC091608 EMBL:AC093576 EMBL:AC099787 EMBL:AC114878
EMBL:AC138135 EMBL:BX908805 EMBL:BC008379 EMBL:BC064027
EMBL:BC108742 EMBL:BC131777 EMBL:BC131778 EMBL:X95670 EMBL:U57655
IPI:IPI00029772 IPI:IPI00095889 PIR:A54718 RefSeq:NP_000101.2
RefSeq:NP_001153773.1 UniGene:Hs.335034 ProteinModelPortal:Q12882
SMR:Q12882 IntAct:Q12882 STRING:Q12882 PhosphoSite:Q12882
DMDM:160332325 PaxDb:Q12882 PRIDE:Q12882 DNASU:1806
Ensembl:ENST00000306031 Ensembl:ENST00000370192 GeneID:1806
KEGG:hsa:1806 UCSC:uc001drv.3 GeneCards:GC01M097543
H-InvDB:HIX0000804 HGNC:HGNC:3012 HPA:CAB033241 MIM:274270
MIM:612779 neXtProt:NX_Q12882 Orphanet:240839 Orphanet:240855
Orphanet:1675 Orphanet:240955 Orphanet:240963 PharmGKB:PA145
InParanoid:Q12882 BindingDB:Q12882 ChEMBL:CHEMBL3172 ChiTaRS:DPYD
DrugBank:DB00109 GenomeRNAi:1806 NextBio:7361 ArrayExpress:Q12882
Bgee:Q12882 CleanEx:HS_DPYD Genevestigator:Q12882
GermOnline:ENSG00000188641 GO:GO:0006210 Uniprot:Q12882
Length = 1025
Score = 1268 (451.4 bits), Expect = 1.2e-223, Sum P(2) = 1.2e-223
Identities = 259/435 (59%), Positives = 316/435 (72%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 187 SAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P N IFQGLT++ GFYT
Sbjct: 246 ELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAIFQGLTQDQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKGSKAGMCACHSPL--PSIRGVVIVLGAGDTAFDCATSALRCGARRVFIVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I MQF RTEQ+E G+W EDE
Sbjct: 364 RKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDE 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+ TM TS VF GGD
Sbjct: 424 DQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQTSEAWVFAGGDVV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
L++TTVESVNDGK A+W+IHKY+Q + +V KP LP F + IDLVDISVE+ GLKF
Sbjct: 484 GLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDISVEMAGLKFI 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS +YGP
Sbjct: 544 NPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPMYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 914 (326.8 bits), Expect = 1.2e-223, Sum P(2) = 1.2e-223
Identities = 172/267 (64%), Positives = 212/267 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 330 (121.2 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
Identities = 65/124 (52%), Positives = 85/124 (68%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP-KRQINTPVETILSVKDVIGQAVQR 501
+P+FG Y + R+ +I E N +L V+ P KR P I ++KDVIG+A+Q
Sbjct: 876 LPSFGPYLEQRKKIIAE-NKIRLKEQNVAFS---PLKRNCFIPKRPIPTIKDVIGKALQY 931
Query: 502 VTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTL 561
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCTL
Sbjct: 932 LGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCTL 991
Query: 562 CLSI 565
CLS+
Sbjct: 992 CLSV 995
>UNIPROTKB|Q5R895 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9601 "Pongo abelii" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006212 "uracil catabolic process" evidence=ISS] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0046872 GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797
HOVERGEN:HBG004351 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 HSSP:Q28943
EMBL:CR859859 RefSeq:NP_001126169.1 UniGene:Pab.11422
ProteinModelPortal:Q5R895 SMR:Q5R895 PRIDE:Q5R895 GeneID:100173131
KEGG:pon:100173131 InParanoid:Q5R895 Uniprot:Q5R895
Length = 1025
Score = 1269 (451.8 bits), Expect = 3.1e-223, Sum P(2) = 3.1e-223
Identities = 261/435 (60%), Positives = 316/435 (72%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 187 SAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 245
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS ++T+ L++ GY A FIGIG P N IFQGLT++ GFYT
Sbjct: 246 ELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAIFQGLTQDQGFYT 305
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 306 SKDFLPLVAKGSKAGMCACHSPL--PSIRGVVIVLGAGDTAFDCATSALRCGARRVFIVF 363
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEE++LA EEKCEFLPF+SP +V VK +I MQF RTEQ+E G+W EDE
Sbjct: 364 RKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDE 423
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
+Q + LKA+ +ISAFGS L D V EA+ P+K +++G PEV+ TM TS VF GGD
Sbjct: 424 DQMVHLKADVVISAFGSVLSDPKVKEAMSPIKFNRWGLPEVDPETMQTSEAWVFAGGDVV 483
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
L++TTVESVNDGK A+W+IHKYIQ + +V KP LP F + IDLVDISVE+ GLKF
Sbjct: 484 GLANTTVESVNDGKQASWYIHKYIQSQYGASVSAKPELPLFYTAIDLVDISVEMAGLKFI 543
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNVSPRIV+GTTS +YGP
Sbjct: 544 NPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPG 603
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 604 QSSFLNIELISEKTA 618
Score = 909 (325.0 bits), Expect = 3.1e-223, Sum P(2) = 3.1e-223
Identities = 171/267 (64%), Positives = 211/267 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+YNK+DW EL+KK+E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 635 NIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG A+GV+A NTVSGLM L +DG PWPAV
Sbjct: 695 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAV 754
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K TTYGGVSG A RP+ L+AV+S A+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 755 GIAKRTTYGGVSGTAIRPIALRAVTSTARALPGFPILATGGIDSAESGLQFLHSGASVLQ 814
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L+ WDGQSP T HQKGKP + + K
Sbjct: 815 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQSPATVSHQKGKPVPRIAELMDK 874
Query: 803 AIPNFGEYKKIRENLITE--LNLKKLN 827
+P+FG Y + R+ +I E + LK+ N
Sbjct: 875 KLPSFGPYLEQRKKIIAENKIRLKEQN 901
Score = 328 (120.5 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y + R+ +I E N +L ++ + KR P + ++KDVIG+A+Q +
Sbjct: 876 LPSFGPYLEQRKKIIAE-NKIRLKEQNIA--SSPHKRNCFIPKRPVPTIKDVIGKALQYL 932
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
+ EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH +TD CTGCTLC
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDTCTGCTLC 992
Query: 563 LSI 565
LS+
Sbjct: 993 LSV 995
>UNIPROTKB|E2RSQ9 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158
TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896 OMA:PWPAVGI
EMBL:AAEX03004787 EMBL:AAEX03004786 Ensembl:ENSCAFT00000031930
Uniprot:E2RSQ9
Length = 1029
Score = 1238 (440.9 bits), Expect = 2.5e-221, Sum P(2) = 2.5e-221
Identities = 254/435 (58%), Positives = 315/435 (72%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L SEIPQ+RLP+DAVNFE+
Sbjct: 161 SAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGL-SISEIPQFRLPYDAVNFEI 219
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +SLS +IT+ L+++GY A FIGIG P+ N IF+ LT+ GFYT
Sbjct: 220 ELMKDLGVKIICGKSLSVNEITLSTLKEEGYKAAFIGIGLPDPNKNSIFKDLTQNHGFYT 279
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSAL CGA +V +VF
Sbjct: 280 SKDFLPLVAKSSKAGMCACHSPL--PSIRGVVIVLGAGDTAFDCATSALCCGARRVFIVF 337
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDE 238
RKG NIRAVPEEV+LA E+KCEFLPF+SP +V++K +I +QF RTEQ+E G W E E
Sbjct: 338 RKGFVNIRAVPEEVELAKEKKCEFLPFLSPRKVELKGGRIVAVQFVRTEQDEAGNWHEHE 397
Query: 239 EQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTA 298
++ ++LKA+ +ISAFGS L D V EA+ P+K +++ PEV+ TM TS P VF GGD
Sbjct: 398 DETVRLKADVVISAFGSVLSDPTVKEALSPLKFNRWNLPEVDPETMQTSEPWVFAGGDIV 457
Query: 299 NLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFP 358
+++TTVESVNDGK A+W+IHKYIQ + +V KP LP F + IDLVDISVE+ GLKF
Sbjct: 458 GVANTTVESVNDGKQASWYIHKYIQSQYGASVCAKPELPLFYTPIDLVDISVEMAGLKFL 517
Query: 359 NPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPE 418
NPFGLASA P T++SM+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS +YGP
Sbjct: 518 NPFGLASATPATSASMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPMYGPG 577
Query: 419 QGSFLNIELISEKTA 433
Q SFLNIELISEKTA
Sbjct: 578 QSSFLNIELISEKTA 592
Score = 922 (329.6 bits), Expect = 2.5e-221, Sum P(2) = 2.5e-221
Identities = 172/263 (65%), Positives = 210/263 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+I+IASIMC+Y+K+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 609 NIVIASIMCSYSKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 668
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR +V+IPFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG PWPAV
Sbjct: 669 CRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAV 728
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G +K TTYGGVSG A RP+ L+AV+SIA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 729 GIEKRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 788
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSAVQNQDFTV+ DY TGL+ LLYLKS + L+ WDGQSP T HQKGKP + + GK
Sbjct: 789 VCSAVQNQDFTVIQDYCTGLKALLYLKSIEELRDWDGQSPATVSHQKGKPVPRIAELMGK 848
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ +I E +++
Sbjct: 849 KLPSFGPYLEQRKEIIAENKIRQ 871
Score = 324 (119.1 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 63/125 (50%), Positives = 87/125 (69%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLP--KRQINTPVETILSVKDVIGQAVQ 500
+P+FG Y + R+ +I E +++ + G P +R+ P + I ++KDVIG+A+Q
Sbjct: 850 LPSFGPYLEQRKEIIAENKIRQKEQNA-----GFPPLERKHFIPKKPIPTIKDVIGKALQ 904
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL N +QVVA+I+++MCINCGKCYM CNDSGYQAI F PETH VTD CTGCT
Sbjct: 905 YLGAFGELSNLEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDSCTGCT 964
Query: 561 LCLSI 565
LCLS+
Sbjct: 965 LCLSV 969
>FB|FBgn0086450 [details] [associations]
symbol:su(r) "suppressor of rudimentary" species:7227
"Drosophila melanogaster" [GO:0004159 "dihydrouracil dehydrogenase
(NAD+) activity" evidence=TAS] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;NAS] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IGI] InterPro:IPR001295 InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS00912 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006207
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
eggNOG:COG0167 EMBL:DQ027826 ProteinModelPortal:Q4TWT4 SMR:Q4TWT4
STRING:Q4TWT4 PaxDb:Q4TWT4 PRIDE:Q4TWT4 FlyBase:FBgn0086450
InParanoid:Q4TWT4 OrthoDB:EOG451C5K ArrayExpress:Q4TWT4 Bgee:Q4TWT4
Uniprot:Q4TWT4
Length = 1031
Score = 1202 (428.2 bits), Expect = 9.2e-218, Sum P(3) = 9.2e-218
Identities = 249/433 (57%), Positives = 305/433 (70%)
Query: 5 KVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEVEL 60
K+ L +P + +T L +D+ ER + L ++EIPQYRLP DAVNFE++L
Sbjct: 186 KIALVGGEPASLSCATFLARLGYRDVTIYERRSYLGGL-SAAEIPQYRLPIDAVNFEIDL 244
Query: 61 VKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSK 120
V+DLGV+IE RSL T+D+TI+ L G+ A+F+GIG P + PIF GL GFYTSK
Sbjct: 245 VRDLGVRIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPEPKLNPIFAGLQPSNGFYTSK 304
Query: 121 TFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
FLP V+ P L G VIVLGAGDTAFDCATSALRCGA +V VVFRK
Sbjct: 305 NFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAFDCATSALRCGARRVFVVFRK 364
Query: 181 GCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQ 240
G + IRAVPEEV+LA +E+CE LP++SP +V VKD I M+F RTEQNE EWVEDEEQ
Sbjct: 365 GSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDGLITAMEFCRTEQNENDEWVEDEEQ 424
Query: 241 RIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANL 300
+LKAN++ISAFGS L D DV A+ P++ + P V+ TM +SV VF GGD A +
Sbjct: 425 TQRLKANFVISAFGSGLEDQDVKAALAPLQF-RGELPVVDRVTMQSSVKQVFLGGDLAGV 483
Query: 301 SDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLKFPNP 360
++TTVESVNDGK AAW IH +Q L + LP F + ID VDISVE+CG++F NP
Sbjct: 484 ANTTVESVNDGKVAAWSIHCQLQ---GLPLDTPAALPLFYTDIDAVDISVEMCGIRFENP 540
Query: 361 FGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYGPEQG 420
FGLASAPPTT+++M+RRAFE GWGF VTKTF L KD+VTNVSPRIV+GTTS + YGP+QG
Sbjct: 541 FGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTNVSPRIVRGTTSGYKYGPQQG 600
Query: 421 SFLNIELISEKTA 433
FLNIELISEK A
Sbjct: 601 CFLNIELISEKRA 613
Score = 901 (322.2 bits), Expect = 9.2e-218, Sum P(3) = 9.2e-218
Identities = 176/266 (66%), Positives = 208/266 (78%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC++N++DW EL+ K E++GADALELNLSCPHGMGERGMGLACGQDPE+V IS
Sbjct: 631 IVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQIS 690
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +VK+PFF+KLTPNIT+I IA AA G ADG SAINTV GLM L AD WPA+G
Sbjct: 691 RWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG 750
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
++ TTYGGVSGNATRPM LKA+S IA P FPILGIGGIDS +VALQFI AGA +QI
Sbjct: 751 KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQFIHAGATVLQI 810
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ--LKG--WDGQSPPTPVHQKGKPAYQFRDKE 800
CS+VQNQDFTV++DY T L+ LLYLK+ + G WDGQSPPTPVHQKGKP + E
Sbjct: 811 CSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQSPPTPVHQKGKPVVRLTG-E 869
Query: 801 GKA-IPNFGEYKKIRENLITELNLKK 825
GKA + FG Y++ R+ + EL +K
Sbjct: 870 GKATLGFFGPYQRQRDIKMAELRSQK 895
Score = 305 (112.4 bits), Expect = 6.9e-155, Sum P(3) = 6.9e-155
Identities = 59/120 (49%), Positives = 76/120 (63%)
Query: 446 FGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRVTNY 505
FG Y++ R+ + EL +K P P +KDVIG A+ ++ +Y
Sbjct: 877 FGPYQRQRDIKMAELRSQKGALWDAEQVKATPPASNGAP-NPAPRIKDVIGAALDKIGSY 935
Query: 506 TELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSI 565
+LDNK+Q VALI+DDMCINCGKCYM C DSGYQAI F +TH HV D+CTGCTLC+S+
Sbjct: 936 NKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSV 995
Score = 55 (24.4 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 769 LKSTQLKGWDG-QSPPTPVHQKG--KPAYQFRDKEGKAIPNFGEYKKI 813
L+S + WD Q TP G PA + +D G A+ G Y K+
Sbjct: 891 LRSQKGALWDAEQVKATPPASNGAPNPAPRIKDVIGAALDKIGSYNKL 938
Score = 40 (19.1 bits), Expect = 9.2e-218, Sum P(3) = 9.2e-218
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 8 LSKDPPDIE 16
LSKD PDIE
Sbjct: 7 LSKDSPDIE 15
Score = 39 (18.8 bits), Expect = 1.2e-217, Sum P(3) = 1.2e-217
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 24 LSKDLPDIE 32
LSKD PDIE
Sbjct: 7 LSKDSPDIE 15
Score = 39 (18.8 bits), Expect = 3.4e-95, Sum P(3) = 3.4e-95
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 146 LKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
L + ++G + CAT R G V + R+
Sbjct: 183 LSQKIALVGGEPASLSCATFLARLGYRDVTIYERR 217
>UNIPROTKB|E1BRA0 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006145 "purine nucleobase catabolic process"
evidence=IEA] [GO:0006210 "thymine catabolic process" evidence=IEA]
[GO:0006212 "uracil catabolic process" evidence=IEA] [GO:0006214
"thymidine catabolic process" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005829
Gene3D:3.20.20.70 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
OMA:PWPAVGI GO:GO:0006210 EMBL:AADN02012893 EMBL:AADN02012894
EMBL:AADN02012895 IPI:IPI00822678 ProteinModelPortal:E1BRA0
Ensembl:ENSGALT00000039100 ArrayExpress:E1BRA0 Uniprot:E1BRA0
Length = 951
Score = 1162 (414.1 bits), Expect = 3.1e-214, Sum P(2) = 3.1e-214
Identities = 235/395 (59%), Positives = 288/395 (72%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE EL+KDLGVKI + L+ +T+ L++DGY A+FIGIG P
Sbjct: 152 ASEIPQFRLPYDVVNFEAELMKDLGVKIIYSKGLAVDGMTLRTLKEDGYEAVFIGIGLPE 211
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
N +FQGL + GFYTSK FLP VA P + GTVIVLGAGDTAF
Sbjct: 212 PNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGMCACQSPL--PSIHGTVIVLGAGDTAF 269
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKC-EFLPFMSPVQVDVKDNKIA 219
DCATSALRCGA +V VVFRKG TNIRAVPEEV+L +++ + L + Q ++ I
Sbjct: 270 DCATSALRCGARRVFVVFRKGFTNIRAVPEEVKLKKQKQTNKVLKILEAPQRSIRHLSII 329
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
GM+F RTEQ G W EDE+Q ++LKA+ +ISAFGS L D+ V+EA+ P+K +++G PEV
Sbjct: 330 GMEFVRTEQGSDGNWKEDEDQVVRLKADVVISAFGSVLSDSKVIEAMTPIKFNRWGLPEV 389
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK-NNLTVPDKPCLPK 338
+ TM TS P VF GGD + ++TTVESVNDGK A+W++H+YIQ+ V P LP
Sbjct: 390 DPETMQTSEPWVFAGGDISGHANTTVESVNDGKQASWYMHRYIQQSLYGAVVSTTPELPL 449
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDISV + GLKFPNPFG+ASA P T+SSM+RRAFE GWGFAVTKTFSL KD+V
Sbjct: 450 FYTPIDLVDISVLMAGLKFPNPFGIASATPATSSSMIRRAFEAGWGFAVTKTFSLDKDIV 509
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
TNVSPRIV+G TS +YGP QGSFLNIELISEKTA
Sbjct: 510 TNVSPRIVRGVTSGPIYGPGQGSFLNIELISEKTA 544
Score = 931 (332.8 bits), Expect = 3.1e-214, Sum P(2) = 3.1e-214
Identities = 179/269 (66%), Positives = 209/269 (77%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+Y+KDDW ELSK E AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 562 ILIASIMCSYSKDDWTELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 621
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFF KLTPN+T+I +IA AA EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 622 RWVRQAVQIPFFAKLTPNVTDIVNIAVAAQEGGADGVTATNTVSGLMGLKADGTPWPAVG 681
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 682 AGLRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 741
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV+DDY TGL+ LLYLKS + L+ W+GQSP T HQKGKP D GK
Sbjct: 742 CSAIQNQDFTVIDDYCTGLRALLYLKSIEELEDWNGQSPTTMRHQKGKPVSGIADLIGKK 801
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVS 832
+P+FG Y + R+ +I E N KL G +
Sbjct: 802 LPSFGPYLEQRKKIIAE-NKMKLKEQGTA 829
Score = 342 (125.4 bits), Expect = 5.7e-152, Sum P(2) = 5.7e-152
Identities = 67/123 (54%), Positives = 87/123 (70%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y + R+ +I E N KL G + LP+++ P + I ++KDVIG+A+Q +
Sbjct: 802 LPSFGPYLEQRKKIIAE-NKMKLKEQGTAAV--LPEKKHFIPKKPIPAIKDVIGKALQYI 858
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y EL N +QVVALI+++MCINCGKCYM CNDSGYQAI F ETH VTD CTGCTLC
Sbjct: 859 GTYGELCNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDAETHLPTVTDSCTGCTLC 918
Query: 563 LSI 565
LS+
Sbjct: 919 LSV 921
Score = 50 (22.7 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
+ +LGAG + CA+ R G + + +F K
Sbjct: 114 IALLGAGPASLSCASFLARLGYSNI-TIFEK 143
Score = 37 (18.1 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 791 KPAYQFRDKEGKAIPNFGEYKKI 813
KP +D GKA+ G Y ++
Sbjct: 842 KPIPAIKDVIGKALQYIGTYGEL 864
>UNIPROTKB|E1C4J1 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
EMBL:AADN02012893 EMBL:AADN02012894 EMBL:AADN02012895
IPI:IPI00597341 Ensembl:ENSGALT00000008842 ArrayExpress:E1C4J1
Uniprot:E1C4J1
Length = 950
Score = 1142 (407.1 bits), Expect = 4.0e-212, Sum P(2) = 4.0e-212
Identities = 233/395 (58%), Positives = 288/395 (72%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
+SEIPQ+RLP+D VNFE EL+KDLGVKI + L+ +T+ L++DGY A+FIGIG P
Sbjct: 152 ASEIPQFRLPYDVVNFEAELMKDLGVKIIYSKGLAVDGMTLRTLKEDGYEAVFIGIGLPE 211
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
N +FQGL + GFYTSK FLP VA P + GTVIVLGAGDTAF
Sbjct: 212 PNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGMCACQSPL--PSIHGTVIVLGAGDTAF 269
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKC-EFLPFMSPVQVDVKDNKIA 219
DCATSALRCGA +V VVFRKG TNIRAVPEEV+L +++ + L + P ++ + +
Sbjct: 270 DCATSALRCGARRVFVVFRKGFTNIRAVPEEVKLKKQKQTNKHLSIIGP-RIILYGCCLX 328
Query: 220 GMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEV 279
M+F RTEQ G W EDE+Q ++LKA+ +ISAFGS L D+ V+EA+ P+K +++G PEV
Sbjct: 329 CMEFVRTEQGSDGNWKEDEDQVVRLKADVVISAFGSVLSDSKVIEAMTPIKFNRWGLPEV 388
Query: 280 NYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK-NNLTVPDKPCLPK 338
+ TM TS P VF GGD + ++TTVESVNDGK A+W++H+YIQ+ V P LP
Sbjct: 389 DPETMQTSEPWVFAGGDISGHANTTVESVNDGKQASWYMHRYIQQSLYGAVVSTTPELPL 448
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDISV + GLKFPNPFG+ASA P T+SSM+RRAFE GWGFAVTKTFSL KD+V
Sbjct: 449 FYTPIDLVDISVLMAGLKFPNPFGIASATPATSSSMIRRAFEAGWGFAVTKTFSLDKDIV 508
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTA 433
TNVSPRIV+G TS +YGP QGSFLNIELISEKTA
Sbjct: 509 TNVSPRIVRGVTSGPIYGPGQGSFLNIELISEKTA 543
Score = 931 (332.8 bits), Expect = 4.0e-212, Sum P(2) = 4.0e-212
Identities = 179/269 (66%), Positives = 209/269 (77%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIASIMC+Y+KDDW ELSK E AGADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 561 ILIASIMCSYSKDDWTELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNIC 620
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR +V+IPFF KLTPN+T+I +IA AA EG ADGV+A NTVSGLM L ADG PWPAVG
Sbjct: 621 RWVRQAVQIPFFAKLTPNVTDIVNIAVAAQEGGADGVTATNTVSGLMGLKADGTPWPAVG 680
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
TTYGGVSGNA RP+ L+AVS+IA+ P FPIL GGIDSA+ LQF+ +GA +Q+
Sbjct: 681 AGLRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 740
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSA+QNQDFTV+DDY TGL+ LLYLKS + L+ W+GQSP T HQKGKP D GK
Sbjct: 741 CSAIQNQDFTVIDDYCTGLRALLYLKSIEELEDWNGQSPTTMRHQKGKPVSGIADLIGKK 800
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVS 832
+P+FG Y + R+ +I E N KL G +
Sbjct: 801 LPSFGPYLEQRKKIIAE-NKMKLKEQGTA 828
Score = 342 (125.4 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
Identities = 67/123 (54%), Positives = 87/123 (70%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P+FG Y + R+ +I E N KL G + LP+++ P + I ++KDVIG+A+Q +
Sbjct: 801 LPSFGPYLEQRKKIIAE-NKMKLKEQGTAAV--LPEKKHFIPKKPIPAIKDVIGKALQYI 857
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
Y EL N +QVVALI+++MCINCGKCYM CNDSGYQAI F ETH VTD CTGCTLC
Sbjct: 858 GTYGELCNTEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDAETHLPTVTDSCTGCTLC 917
Query: 563 LSI 565
LS+
Sbjct: 918 LSV 920
Score = 50 (22.7 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
+ +LGAG + CA+ R G + + +F K
Sbjct: 114 IALLGAGPASLSCASFLARLGYSNI-TIFEK 143
Score = 37 (18.1 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 791 KPAYQFRDKEGKAIPNFGEYKKI 813
KP +D GKA+ G Y ++
Sbjct: 841 KPIPAIKDVIGKALQYIGTYGEL 863
>WB|WBGene00016103 [details] [associations]
symbol:dpyd-1 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158
GO:GO:0017113 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
EMBL:FO080672 PIR:T15616 RefSeq:NP_508927.2
ProteinModelPortal:Q18164 DIP:DIP-25332N MINT:MINT-1123364
STRING:Q18164 PaxDb:Q18164 EnsemblMetazoa:C25F6.3 GeneID:180818
KEGG:cel:CELE_C25F6.3 CTD:180818 WormBase:C25F6.3
GeneTree:ENSGT00500000044896 InParanoid:Q18164 OMA:PWPAVGI
NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 1206 (429.6 bits), Expect = 4.6e-212, Sum P(3) = 4.6e-212
Identities = 228/392 (58%), Positives = 297/392 (75%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V+FE++L +D+GV+IE R L +T+ KL++ G A+FIGIG P
Sbjct: 241 SAEIPQFRLPYDVVDFEIQLARDIGVQIETNRPLGKDGLTLAKLKEQGAAAVFIGIGNPE 300
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
+ P+F+GLT E GFYTSK +LP VA P ++G V+VLGAGDTA
Sbjct: 301 PKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCGCKRTPL-PTMRGRVVVLGAGDTAM 359
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P +++VKD +I
Sbjct: 360 DCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKINVKDGRIVS 419
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P +L+K+G EV+
Sbjct: 420 IEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQPCQLNKWGGIEVD 479
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TT TS VF GGD A +++TTVESVNDGK AAW++H+YIQ + V + P LP+F
Sbjct: 480 STTQQTSEKWVFAGGDVAGVAETTVESVNDGKIAAWNMHRYIQSLHGNQVSETPELPQFF 539
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT+ L KD+VTN
Sbjct: 540 TPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTN 599
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRIV+G+TS LYGP QGSF+NIELISEK+
Sbjct: 600 VSPRIVRGSTSGPLYGPNQGSFMNIELISEKS 631
Score = 843 (301.8 bits), Expect = 4.6e-212, Sum P(3) = 4.6e-212
Identities = 163/264 (61%), Positives = 200/264 (75%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC YNK DW+EL+ K+E+AGAD LELNLSCPHGMGE+GMGLACGQ PE+V+ I
Sbjct: 650 IVIASIMCVYNKADWIELATKSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEIC 709
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G
Sbjct: 710 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIG 769
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 770 STKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQV 829
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVVDDY TGL+ LLYL + LK WDGQSPP HQKGKP K+
Sbjct: 830 CSAVQNQDFTVVDDYCTGLKALLYLSGAESLKNWDGQSPPIEKHQKGKPILLQGQKK--- 886
Query: 804 IPNFGEYKKIRENL----ITELNL 823
+P FG+Y+ RE L ++E NL
Sbjct: 887 MPFFGKYRDEREKLEAIKLSESNL 910
Score = 333 (122.3 bits), Expect = 2.9e-158, Sum P(3) = 2.9e-158
Identities = 66/124 (53%), Positives = 87/124 (70%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P FG+Y+ RE L +K S+ + +N + +T V + +V+DVIG+A+ R+
Sbjct: 887 MPFFGKYRDEREKLEA---IKLSESNLLDTENYHFASRPDTQVSRVPTVEDVIGKALPRI 943
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DECTGCTL 561
Y LDN++Q VA+I+DDMCINCGKCYM CNDSGYQAITF P THQ HVT D+CTGCTL
Sbjct: 944 GPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDPVTHQPHVTEDDCTGCTL 1003
Query: 562 CLSI 565
C S+
Sbjct: 1004 CYSV 1007
Score = 51 (23.0 bits), Expect = 2.3e-90, Sum P(3) = 2.3e-90
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 40 DSSEIPQYRLPFDAVNFEVELVKDLGVKIE 69
++ E+PQ+ P D V+ V++ GVK E
Sbjct: 531 ETPELPQFFTPIDEVDISVDMC---GVKFE 557
Score = 49 (22.3 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
Identities = 22/66 (33%), Positives = 25/66 (37%)
Query: 360 PFGLASAPPTTASSMVRRAFENGW--GFAVTKTFSLQKDMVT--NVSPRIVKGTTSRHLY 415
PF P T + RA +G G T T S M N P I G+T R Y
Sbjct: 719 PFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAI--GSTKRTTY 776
Query: 416 GPEQGS 421
G GS
Sbjct: 777 GGMSGS 782
Score = 45 (20.9 bits), Expect = 6.4e-128, Sum P(3) = 6.4e-128
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 518 INDDMCINCGKCYMAC 533
+ +D C C CY C
Sbjct: 993 VTEDDCTGCTLCYSVC 1008
Score = 42 (19.8 bits), Expect = 2.0e-89, Sum P(3) = 2.0e-89
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 147 KGTVIVLGAGDTAFDCATSALRCGANKVLV 176
K V ++G G + CA+ R G + +
Sbjct: 200 KEQVALIGCGPASISCASFLARLGYTDITI 229
Score = 40 (19.1 bits), Expect = 4.6e-212, Sum P(3) = 4.6e-212
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 8 LSKDPPDIE 16
LSKD PDIE
Sbjct: 17 LSKDSPDIE 25
Score = 39 (18.8 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 24 LSKDLPDIE 32
LSKD PDIE
Sbjct: 17 LSKDSPDIE 25
Score = 37 (18.1 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 798 DKEGKAIPNFGEY 810
D GKA+P G Y
Sbjct: 934 DVIGKALPRIGPY 946
>UNIPROTKB|Q18164 [details] [associations]
symbol:dpyd-1 "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:6239 "Caenorhabditis elegans" [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
[GO:0006214 "thymidine catabolic process" evidence=ISS] [GO:0006212
"uracil catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0009055 GO:GO:0046872 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:FO080672
PIR:T15616 RefSeq:NP_508927.2 ProteinModelPortal:Q18164
DIP:DIP-25332N MINT:MINT-1123364 STRING:Q18164 PaxDb:Q18164
EnsemblMetazoa:C25F6.3 GeneID:180818 KEGG:cel:CELE_C25F6.3
CTD:180818 WormBase:C25F6.3 GeneTree:ENSGT00500000044896
InParanoid:Q18164 OMA:PWPAVGI NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 1206 (429.6 bits), Expect = 4.6e-212, Sum P(3) = 4.6e-212
Identities = 228/392 (58%), Positives = 297/392 (75%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
S+EIPQ+RLP+D V+FE++L +D+GV+IE R L +T+ KL++ G A+FIGIG P
Sbjct: 241 SAEIPQFRLPYDVVDFEIQLARDIGVQIETNRPLGKDGLTLAKLKEQGAAAVFIGIGNPE 300
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
+ P+F+GLT E GFYTSK +LP VA P ++G V+VLGAGDTA
Sbjct: 301 PKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCGCKRTPL-PTMRGRVVVLGAGDTAM 359
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEFLPF +P +++VKD +I
Sbjct: 360 DCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEFLPFSAPRKINVKDGRIVS 419
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++ VL A++P +L+K+G EV+
Sbjct: 420 IEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQPCQLNKWGGIEVD 479
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFM 340
TT TS VF GGD A +++TTVESVNDGK AAW++H+YIQ + V + P LP+F
Sbjct: 480 STTQQTSEKWVFAGGDVAGVAETTVESVNDGKIAAWNMHRYIQSLHGNQVSETPELPQFF 539
Query: 341 SHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTN 400
+ ID VDISV++CG+KF NPFGLASAPPTT+ M RRAFE GWGF +TKT+ L KD+VTN
Sbjct: 540 TPIDEVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTN 599
Query: 401 VSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
VSPRIV+G+TS LYGP QGSF+NIELISEK+
Sbjct: 600 VSPRIVRGSTSGPLYGPNQGSFMNIELISEKS 631
Score = 843 (301.8 bits), Expect = 4.6e-212, Sum P(3) = 4.6e-212
Identities = 163/264 (61%), Positives = 200/264 (75%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC YNK DW+EL+ K+E+AGAD LELNLSCPHGMGE+GMGLACGQ PE+V+ I
Sbjct: 650 IVIASIMCVYNKADWIELATKSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEIC 709
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR+ VKIPFF K+TPNIT++ +IA+AA +G A GV+A NTVS LM + ADGN WPA+G
Sbjct: 710 RWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIG 769
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+ K TTYGG+SG+A RP+ +KAVSSIA FPI+ GGI+SA+ L F+ AGA +Q+
Sbjct: 770 STKRTTYGGMSGSAIRPIAMKAVSSIANELDGFPIMATGGIESAETGLGFLMAGASVLQV 829
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CSAVQNQDFTVVDDY TGL+ LLYL + LK WDGQSPP HQKGKP K+
Sbjct: 830 CSAVQNQDFTVVDDYCTGLKALLYLSGAESLKNWDGQSPPIEKHQKGKPILLQGQKK--- 886
Query: 804 IPNFGEYKKIRENL----ITELNL 823
+P FG+Y+ RE L ++E NL
Sbjct: 887 MPFFGKYRDEREKLEAIKLSESNL 910
Score = 333 (122.3 bits), Expect = 2.9e-158, Sum P(3) = 2.9e-158
Identities = 66/124 (53%), Positives = 87/124 (70%)
Query: 443 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQRV 502
+P FG+Y+ RE L +K S+ + +N + +T V + +V+DVIG+A+ R+
Sbjct: 887 MPFFGKYRDEREKLEA---IKLSESNLLDTENYHFASRPDTQVSRVPTVEDVIGKALPRI 943
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVT-DECTGCTL 561
Y LDN++Q VA+I+DDMCINCGKCYM CNDSGYQAITF P THQ HVT D+CTGCTL
Sbjct: 944 GPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDPVTHQPHVTEDDCTGCTL 1003
Query: 562 CLSI 565
C S+
Sbjct: 1004 CYSV 1007
Score = 51 (23.0 bits), Expect = 2.3e-90, Sum P(3) = 2.3e-90
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 40 DSSEIPQYRLPFDAVNFEVELVKDLGVKIE 69
++ E+PQ+ P D V+ V++ GVK E
Sbjct: 531 ETPELPQFFTPIDEVDISVDMC---GVKFE 557
Score = 49 (22.3 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
Identities = 22/66 (33%), Positives = 25/66 (37%)
Query: 360 PFGLASAPPTTASSMVRRAFENGW--GFAVTKTFSLQKDMVT--NVSPRIVKGTTSRHLY 415
PF P T + RA +G G T T S M N P I G+T R Y
Sbjct: 719 PFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAI--GSTKRTTY 776
Query: 416 GPEQGS 421
G GS
Sbjct: 777 GGMSGS 782
Score = 45 (20.9 bits), Expect = 6.4e-128, Sum P(3) = 6.4e-128
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 518 INDDMCINCGKCYMAC 533
+ +D C C CY C
Sbjct: 993 VTEDDCTGCTLCYSVC 1008
Score = 42 (19.8 bits), Expect = 2.0e-89, Sum P(3) = 2.0e-89
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 147 KGTVIVLGAGDTAFDCATSALRCGANKVLV 176
K V ++G G + CA+ R G + +
Sbjct: 200 KEQVALIGCGPASISCASFLARLGYTDITI 229
Score = 40 (19.1 bits), Expect = 4.6e-212, Sum P(3) = 4.6e-212
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 8 LSKDPPDIE 16
LSKD PDIE
Sbjct: 17 LSKDSPDIE 25
Score = 39 (18.8 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 24 LSKDLPDIE 32
LSKD PDIE
Sbjct: 17 LSKDSPDIE 25
Score = 37 (18.1 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 798 DKEGKAIPNFGEY 810
D GKA+P G Y
Sbjct: 934 DVIGKALPRIGPY 946
>UNIPROTKB|F1M412 [details] [associations]
symbol:F1M412 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
IPI:IPI00209289 Ensembl:ENSRNOT00000023229 ArrayExpress:F1M412
Uniprot:F1M412
Length = 950
Score = 1148 (409.2 bits), Expect = 8.3e-212, Sum P(2) = 8.3e-212
Identities = 239/437 (54%), Positives = 301/437 (68%)
Query: 3 TAKVCL-SKDPPDIEMSTAKVCLS-KDLPDIERP--VAALPDSSEIPQYRLPFDAVNFEV 58
+AK+ L P I ++ L D+ E+ V L +SEIPQ+RLP+D VNFE+
Sbjct: 110 SAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRLPYDVVNFEI 168
Query: 59 ELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYT 118
EL+KDLGVKI C +S+ST ++T+ L+++GY A FIGIG P IFQGLT+ GFYT
Sbjct: 169 ELMKDLGVKIICGKSISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYT 228
Query: 119 SKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVF 178
SK FLP VA P ++G VIVLGAGDTAFDCATSALRCGA +V +VF
Sbjct: 229 SKDFLPLVAKGSKPGMCACHSPL--PSVRGAVIVLGAGDTAFDCATSALRCGARRVFIVF 286
Query: 179 RKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGE-WVED 237
RKG NIRAVPEEV +E++C FL F+SP + +D I+ + + RTE E G W+
Sbjct: 287 RKGFANIRAVPEEVNQKFEQRCAFLRFLSPRGLIQEDGVISSLAYKRTESYETGNPWMVS 346
Query: 238 EEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGD 296
Q L + I+ F S L ++ +L EA+ P+K +++G PEVN TM TS P VF GGD
Sbjct: 347 SHQSGTLNSICILLDFSSDLHEDPLLIEALSPIKFNRWGLPEVNPETMQTSEPWVFAGGD 406
Query: 297 TANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISVEICGLK 356
+++TTVESVNDGK A+W+IHKYIQ + VP +P LP F + +DLVDISVE+ GL+
Sbjct: 407 VVGMANTTVESVNDGKQASWYIHKYIQAQYGALVPSQPTLPLFYTPVDLVDISVEMAGLR 466
Query: 357 FPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTSRHLYG 416
FPNPFGLASA P T++ M+RRAFE GWGFA+TKTFSL KD+VTNVSPRI++GTTS LYG
Sbjct: 467 FPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRGTTSGPLYG 526
Query: 417 PEQGSFLNIELISEKTA 433
P Q SFLNIELISEKTA
Sbjct: 527 PGQSSFLNIELISEKTA 543
Score = 922 (329.6 bits), Expect = 8.3e-212, Sum P(2) = 8.3e-212
Identities = 169/263 (64%), Positives = 210/263 (79%)
Query: 564 SILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
+ILIASIMC+YNK+DW+ELSK E +GADALELNLSCPHGMGERGMGLACGQDPE+VRNI
Sbjct: 560 NILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 619
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
WVR SV++PFF KLTPN+T+I IA+AA EG ADGV+A NTVSGLM L ADG+PWP+V
Sbjct: 620 CRWVRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGSPWPSV 679
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G+ K TTYGGVSG A RP+ L+AV++IA+ P FPIL GGIDSA+ LQF+ +GA +Q
Sbjct: 680 GSGKRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQ 739
Query: 744 ICSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGK 802
+CSA+QNQDFTV++DY TGL+ LLYLKS + L WDGQSPPT HQKGKP + G+
Sbjct: 740 VCSAIQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQSPPTMSHQKGKPVPHIAELMGQ 799
Query: 803 AIPNFGEYKKIRENLITELNLKK 825
+P+FG Y + R+ ++ +++
Sbjct: 800 KLPSFGPYLERRKKILAASKIRE 822
Score = 310 (114.2 bits), Expect = 4.1e-147, Sum P(2) = 4.1e-147
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
Q +P+FG Y + R+ ++ +++ + + + L ++ N+ + I ++KDVIG+++Q
Sbjct: 799 QKLPSFGPYLERRKKILAASKIREKDQNRAC--SPLQRKHFNSQ-KPIPAIKDVIGKSLQ 855
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
+ + EL+ +QVVALI+++MCINCGKCYM CNDSGYQAI F PETH V+D CTGCT
Sbjct: 856 YLGTFGELNVMEQVVALIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVSDTCTGCT 915
Query: 561 LCLSI 565
LCLS+
Sbjct: 916 LCLSV 920
>DICTYBASE|DDB_G0267966 [details] [associations]
symbol:pyd1 "dihydropyrimidine dehydrogenase"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=IEA;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0019483 "beta-alanine
biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 dictyBase:DDB_G0267966 Prosite:PS00198
GO:GO:0005737 GenomeReviews:CM000150_GR Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 EMBL:AAFI02000003
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 KO:K00207 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 OMA:PWPAVGI HSSP:Q28943
eggNOG:COG0167 EMBL:AF545064 RefSeq:XP_647452.1
ProteinModelPortal:Q55FT1 SMR:Q55FT1 STRING:Q55FT1
EnsemblProtists:DDB0231100 GeneID:8616259 KEGG:ddi:DDB_G0267966
ProtClustDB:CLSZ2431542 Uniprot:Q55FT1
Length = 1009
Score = 1126 (401.4 bits), Expect = 4.1e-199, Sum P(2) = 4.1e-199
Identities = 216/394 (54%), Positives = 287/394 (72%)
Query: 41 SSEIPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPN 100
SSEIP YRL ++ V FE++L+KDLGVK+E + L T+E L+K GY AI++GIG P
Sbjct: 227 SSEIPNYRLNYEVVEFEIKLMKDLGVKVEYGKRLGENGFTVESLQKQGYEAIYLGIGMPE 286
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
+ P+F LT + GF++SK FLP+V+ P L G VIVLGAGDTAF
Sbjct: 287 PKIDPVFNELTSDQGFFSSKEFLPKVSKASKAGMCGCKSQL--PQLNGRVIVLGAGDTAF 344
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
DCATSA RCGA++V V FR+G +++RAVPEEV +A +E+CEFLP++ P QV +D K+
Sbjct: 345 DCATSAFRCGASRVTVCFRRGFSDMRAVPEEVDIAKDERCEFLPYVLPKQVIKRDGKVVA 404
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
M+F +TE+ + G + DE+Q ++K +YIISAFGS + V E+ P++ +K+G +++
Sbjct: 405 MEFYKTEKGDDGNYSVDEDQFFRVKCDYIISAFGSQI--GSVAESCSPLQFNKWGTADID 462
Query: 281 YTTMATS-VPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTVPD-KPCLPK 338
TM + +FCGGD + TTVE+VNDGKTA+W+IHKY+Q + + +PD P LP
Sbjct: 463 PMTMTSKHAEWLFCGGDLVG-NGTTVEAVNDGKTASWNIHKYLQSLHGIPIPDGPPQLPN 521
Query: 339 FMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
F + IDLVDISVE+CG+KFPNPFGLASA P T+++M+RR+FE GWGFAVTKTFSL KD+V
Sbjct: 522 FFTPIDLVDISVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLV 581
Query: 399 TNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKT 432
TNVSPRIV+GTTS H +GP QG+FLNIELISEKT
Sbjct: 582 TNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKT 615
Score = 824 (295.1 bits), Expect = 4.1e-199, Sum P(2) = 4.1e-199
Identities = 161/274 (58%), Positives = 201/274 (73%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
I+IASIMC +NK+DW +L+K E +GAD +ELNLSCPHGMGE+GMGLACGQD E+V +I
Sbjct: 634 IVIASIMCGFNKEDWTQLAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELVFHIC 693
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
WVR++ ++PFF KLTPN+T I +IAKAA++G ADGV+AINTVSGLM L D N WPA+G
Sbjct: 694 QWVRAATRLPFFAKLTPNVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIG 753
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
+K TTYGGVSGNATRP+ L+AVSSI K P++PI+ GG DSAD +QF+ GA VQI
Sbjct: 754 DEKRTTYGGVSGNATRPIALRAVSSIRKSLPDYPIMATGGADSADATIQFLHCGASVVQI 813
Query: 745 CSAVQNQDFTVVDDYITGLQTLLYLKSTQ-LKGWDGQSPPTPVHQKGKPAYQFRDKEGKA 803
CS+VQNQDFTVV DYITGL+T LY++S + L WDGQSPP + K P K
Sbjct: 814 CSSVQNQDFTVVQDYITGLKTYLYMQSREDLLQWDGQSPPNEIINKN-PKL-------KG 865
Query: 804 IPNFGEYKKIRENLITELNLKKLNSDGVSLQNGL 837
+P FG+Y R + TE +K N D ++N L
Sbjct: 866 LPKFGKYLLERNRIDTE---EKQNIDLQKVKNPL 896
Score = 286 (105.7 bits), Expect = 3.0e-142, Sum P(2) = 3.0e-142
Identities = 59/125 (47%), Positives = 78/125 (62%)
Query: 441 QAIPNFGEYKKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPVETILSVKDVIGQAVQ 500
+ +P FG+Y R + TE +K N D ++N L P + S+KD I +A+
Sbjct: 864 KGLPKFGKYLLERNRIDTE---EKQNIDLQKVKNPLVPSP--NPTHPVPSLKDQINRAIP 918
Query: 501 RVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCT 560
R+ + +L +QVVALI++D CINCGKCYM CNDSGYQAI F +TH VTD CTGC
Sbjct: 919 RIGRHDDLKRDQQVVALIDEDKCINCGKCYMTCNDSGYQAIKFDGKTHIPLVTDLCTGCD 978
Query: 561 LCLSI 565
LCLS+
Sbjct: 979 LCLSV 983
Score = 53 (23.7 bits), Expect = 2.0e-89, Sum P(3) = 2.0e-89
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 147 KGTVIVLGAGDTAFDCATSALRCGANKVLVVFRK 180
K + ++G G T+ CAT R G V +F K
Sbjct: 186 KAKIALIGCGPTSISCATFLGRLGYTDV-TIFEK 218
Score = 48 (22.0 bits), Expect = 2.0e-89, Sum P(3) = 2.0e-89
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 448 EY-KKIRENLITELNLKKLNSDGVSLQNGLPKRQINTPV 485
EY K++ EN T +L+K + + L G+P+ +I+ PV
Sbjct: 255 EYGKRLGENGFTVESLQKQGYEAIYLGIGMPEPKID-PV 292
Score = 45 (20.9 bits), Expect = 8.6e-117, Sum P(2) = 8.6e-117
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 783 PTPVHQKGKPAYQFRDKEGKAIPNFGEYKKIREN 816
P P H P +D+ +AIP G + ++ +
Sbjct: 900 PNPTH----PVPSLKDQINRAIPRIGRHDDLKRD 929
Score = 41 (19.5 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLV 176
++ G D+A D L CGA+ V +
Sbjct: 788 IMATGGADSA-DATIQFLHCGASVVQI 813
Score = 40 (19.1 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 507 ELDNKKQVVALINDDMCINCGKCYMAC 533
+ D K + L+ D +C C C C
Sbjct: 960 KFDGKTHI-PLVTD-LCTGCDLCLSVC 984
>TIGR_CMR|SPO_1777 [details] [associations]
symbol:SPO_1777 "dihydroorotate dehydrogenase family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016627 "oxidoreductase
activity, acting on the CH-CH group of donors" evidence=ISS]
InterPro:IPR001450 InterPro:IPR005720 InterPro:IPR012135
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0009055 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0051536 GO:GO:0006222 KO:K00207
GO:GO:0004158 TIGRFAMs:TIGR01037 HOGENOM:HOG000225106
ProtClustDB:PRK08318 OMA:THPNNPM RefSeq:YP_167014.1
ProteinModelPortal:Q5LSJ1 GeneID:3193314 KEGG:sil:SPO1777
PATRIC:23376879 Uniprot:Q5LSJ1
Length = 434
Score = 383 (139.9 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 84/222 (37%), Positives = 126/222 (56%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+I SIM + +W + + + GAD +ELN CPHGM ERGMG A GQ PE + ++
Sbjct: 105 VIVSIMVPCEEAEWKAILPRVAETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTR 164
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAVG 684
W ++ P VKLTPNIT+I A+AA G AD VS INT+S + S++ D +P P++
Sbjct: 165 WCKTYYDKPVIVKLTPNITDIRYPARAARNGGADAVSLINTISSITSVNLDNFSPEPSID 224
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
K ++GG G A +P+ + V+ I++ PI GIGG+ + A +F+ G V
Sbjct: 225 GKG--SHGGYCGPAVKPIAMNMVAEISRDPATQGLPISGIGGVTTWRDAAEFMSLGCGTV 282
Query: 743 QICSAVQNQDFTVVDDYITGLQTLLYLKS-TQLKGWDGQSPP 783
Q+C+A F VV++ TGL + K T + + G++ P
Sbjct: 283 QVCTAAMTYGFRVVEEMKTGLSQWMDEKGYTSVNDFIGRAVP 324
Score = 165 (63.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
SV D IG+AV VT++ L+ A I+ D CI CG+CY AC D+ +QAI+ +
Sbjct: 314 SVNDFIGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCGRCYAACEDTSHQAISMSEDRVF 373
Query: 550 AHVTDECTGCTLCLSI 565
+ DEC C LC+ +
Sbjct: 374 EVMDDECVACNLCVDV 389
Score = 149 (57.5 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 38/90 (42%), Positives = 50/90 (55%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVS-P 403
+ D+ G++ PNPF LASAPPT VRRAFE GWG V KT + V NV+ P
Sbjct: 1 MADLKTNFLGIESPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGP 60
Query: 404 RIVKGTTSRHLYGPEQG--SFLNIELISEK 431
R G +YG ++ NIELI+++
Sbjct: 61 RY--GA----IYGADRRLLGLNNIELITDR 84
Score = 49 (22.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 503 TNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTG 558
T++ + + V + DD C+ C C C G I+ P Q TD TG
Sbjct: 360 TSHQAISMSEDRVFEVMDDECVACNLCVDVCPIDG--CISMVPM--QPGETDPRTG 411
Score = 37 (18.1 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 5/23 (21%), Positives = 14/23 (60%)
Query: 801 GKAIPNFGEYKKIRENLITELNL 823
G+A+PN +++ + N + + +
Sbjct: 320 GRAVPNVTDWQYLNLNYVAKAKI 342
>UNIPROTKB|Q4KDN0 [details] [associations]
symbol:PFL_2546 "Dihydroorotate dehydrogenase family/4Fe-4S
binding domain protein" species:220664 "Pseudomonas protegens Pf-5"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016634
"oxidoreductase activity, acting on the CH-CH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR012135 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838 PIRSF:PIRSF000164
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0009055 GO:GO:0051536 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0006222 KO:K00207 GO:GO:0004158
TIGRFAMs:TIGR01037 eggNOG:COG0167 HOGENOM:HOG000225106
ProtClustDB:PRK08318 RefSeq:YP_259653.1 ProteinModelPortal:Q4KDN0
STRING:Q4KDN0 GeneID:3478243 KEGG:pfl:PFL_2546 PATRIC:19874371
OMA:THPNNPM BioCyc:PFLU220664:GIX8-2560-MONOMER GO:GO:0016634
Uniprot:Q4KDN0
Length = 424
Score = 392 (143.0 bits), Expect = 5.2e-49, Sum P(2) = 5.2e-49
Identities = 84/201 (41%), Positives = 118/201 (58%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
LI S+M ++ W + E GAD +ELN CPHGM ERGMG A GQ PE V ++
Sbjct: 103 LIVSLMVPCVEESWKAILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTR 162
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAVG 684
W ++ +P VKLTPNIT+I A+AA+ G AD VS INT++ + S+ + P VG
Sbjct: 163 WCKTYCSLPVIVKLTPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVAHPMVG 222
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAK--MFPNFPILGIGGIDSADVALQFIQAGAHAV 742
++ +T+GG G+A +P+ L V+ IA+ PI GIGGI S A +F+ G AV
Sbjct: 223 SQ--STHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVALGCGAV 280
Query: 743 QICSAVQNQDFTVVDDYITGL 763
Q+C+A F +V++ GL
Sbjct: 281 QVCTAAMLHGFRIVEEMKDGL 301
Score = 164 (62.8 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++D G+AV T++ LD QV+A I+ CI CG+C++AC D+ +QAI +
Sbjct: 312 SLQDFSGRAVGNTTDWKYLDINYQVIARIDQQACIGCGRCHIACEDTSHQAIASLRQADG 371
Query: 550 AHV----TDECTGCTLC 562
+HV DEC GC LC
Sbjct: 372 SHVYEVIDDECVGCNLC 388
Score = 154 (59.3 bits), Expect = 5.2e-49, Sum P(2) = 5.2e-49
Identities = 40/90 (44%), Positives = 51/90 (56%)
Query: 345 LVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR 404
+ D+S+ G+K PNPF LASAPPT + V RAFE GWG V KT + NVS R
Sbjct: 1 MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-EDPAAVNVSSR 59
Query: 405 IVKGTTSRHLYGP--EQGSFLNIELISEKT 432
S H +GP E NIELI++++
Sbjct: 60 Y-----SAH-FGPNREVMGINNIELITDRS 83
Score = 49 (22.3 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 500 QRVTNYTELDNKKQVVALINDDMCINCGKCYMAC 533
Q + + + D V +I DD C+ C C + C
Sbjct: 361 QAIASLRQADGS-HVYEVI-DDECVGCNLCQITC 392
>TAIR|locus:2088570 [details] [associations]
symbol:PYD1 "pyrimidine 1" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=ISS] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0016627 "oxidoreductase activity, acting
on the CH-CH group of donors" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006212 "uracil catabolic process"
evidence=IMP] [GO:0009536 "plastid" evidence=IDA] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=IMP]
[GO:0043562 "cellular response to nitrogen levels" evidence=IEP]
[GO:0009570 "chloroplast stroma" evidence=IDA] InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 GO:GO:0009570 EMBL:CP002686 Gene3D:3.20.20.70
GO:GO:0043562 GO:GO:0006222 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006212 TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:AB019230
HOGENOM:HOG000225106 OMA:VDALEIN EMBL:AY035029 EMBL:AY059103
EMBL:AF545062 IPI:IPI00522878 RefSeq:NP_188408.1 UniGene:At.24647
ProteinModelPortal:Q9LVI9 SMR:Q9LVI9 STRING:Q9LVI9 PRIDE:Q9LVI9
EnsemblPlants:AT3G17810.1 GeneID:821049 KEGG:ath:AT3G17810
TAIR:At3g17810 InParanoid:Q9LVI9 PhylomeDB:Q9LVI9
ProtClustDB:PLN02495 ArrayExpress:Q9LVI9 Genevestigator:Q9LVI9
Uniprot:Q9LVI9
Length = 426
Score = 370 (135.3 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 79/190 (41%), Positives = 116/190 (61%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
ILIAS+M YNK W EL + E+ G DALE+N SCPHGM ER MG A GQD ++ +
Sbjct: 156 ILIASVMEEYNKTAWEELIDRVEQTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVC 215
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADG-NPWPAV 683
W+ + +P + K+TPNIT+IT+ A+ + + +G++AINT+ +M + P P V
Sbjct: 216 GWINAKATVPVWAKMTPNITDITEPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCV 275
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-FP----ILGIGGIDSADVALQFIQAG 738
+ +T GG S A RP+ L V +IAKM + F + GIGG+++ A +FI G
Sbjct: 276 --EGYSTPGGYSYKAVRPIALAKVMNIAKMMKSEFSEDRSLSGIGGVETGYDAAEFILLG 333
Query: 739 AHAVQICSAV 748
++ VQ+C+ V
Sbjct: 334 SNTVQVCTGV 343
Score = 173 (66.0 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV + GLK PNPF + S PP T ++++RAF+ GWG + KT SL V NV+PR
Sbjct: 51 DLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYA 110
Query: 407 K-GTTSRHLYGPEQGSFLNIELISEK 431
+ T S + + NIELIS++
Sbjct: 111 RLRTGSNGSAKTDVIGWQNIELISDR 136
Score = 39 (18.8 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 64 LGVKIE-CERSLSTRDITIEKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKT 121
+G+KI S +T+ L+ IG G P N + + E G +KT
Sbjct: 38 VGLKISSAAESEPDLSVTVNGLKMPN--PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKT 94
>UNIPROTKB|Q8ZNL7 [details] [associations]
symbol:preA "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreA" species:99287 "Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS] InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872
EMBL:AE006468 GenomeReviews:AE006468_GR GO:GO:0051539 GO:GO:0003954
GO:GO:0006222 GO:GO:0006208 GO:GO:0004158 TIGRFAMs:TIGR01037
HSSP:Q28943 eggNOG:COG0167 HOGENOM:HOG000225106 OMA:VDALEIN
ProtClustDB:PRK08318 GO:GO:0004159 RefSeq:NP_461132.1
ProteinModelPortal:Q8ZNL7 PRIDE:Q8ZNL7 GeneID:1253709
KEGG:stm:STM2187 PATRIC:32382967 Uniprot:Q8ZNL7
Length = 411
Score = 335 (123.0 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 75/207 (36%), Positives = 117/207 (56%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ E+AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIMGE-NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++ INTV + ++ + P V
Sbjct: 161 RAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + +M P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQL-RMHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 148 (57.2 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S++++IG A + +LD V IN + C+ CG+CY++C D G+QA+ + +
Sbjct: 311 SLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 134 (52.2 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 34/86 (39%), Positives = 45/86 (52%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+SV CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLTKEDTGFIGFKNMEQIAE 82
Score = 40 (19.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 523 CINCGK-CYMACNDSG 537
C+ CG C +AC D G
Sbjct: 381 CLLCGHVCPVACIDLG 396
>UNIPROTKB|P25889 [details] [associations]
symbol:preA "NADH-dependent dihydropyrimidine dehydrogenase
subunit" species:83333 "Escherichia coli K-12" [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0004152 "dihydroorotate dehydrogenase activity"
evidence=IEA] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=IDA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA;IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004159 "dihydrouracil dehydrogenase
(NAD+) activity" evidence=IEA;ISS] [GO:0006928 "cellular component
movement" evidence=IMP] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR005720 InterPro:IPR012135
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0046872 GO:GO:0006928 GO:GO:0051539 GO:GO:0051536
GO:GO:0003954 GO:GO:0006222 EMBL:M59444 GO:GO:0006208 GO:GO:0004158
TIGRFAMs:TIGR01037 eggNOG:COG0167 HOGENOM:HOG000225106 OMA:VDALEIN
ProtClustDB:PRK08318 GO:GO:0004159 RefSeq:NP_416652.4
RefSeq:YP_490386.1 ProteinModelPortal:P25889 SMR:P25889
DIP:DIP-11915N IntAct:P25889 EnsemblBacteria:EBESCT00000001392
EnsemblBacteria:EBESCT00000016623 GeneID:12930176 GeneID:949037
KEGG:ecj:Y75_p2109 KEGG:eco:b2147 PATRIC:32119637 EchoBASE:EB1266
EcoGene:EG11289 BioCyc:EcoCyc:EG11289-MONOMER
BioCyc:ECOL316407:JW2134-MONOMER BioCyc:MetaCyc:EG11289-MONOMER
Genevestigator:P25889 Uniprot:P25889
Length = 411
Score = 326 (119.8 bits), Expect = 7.5e-40, Sum P(2) = 7.5e-40
Identities = 74/207 (35%), Positives = 117/207 (56%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 103 VLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 161 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 220
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + + P +FPI GIGGI++ + A +F+ GA
Sbjct: 221 NGK--SSISGYSGKAVKPIALRFIQQM-RTHPELRDFPISGIGGIETWEDAAEFLLLGAA 277
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 278 TLQVTTGIMQYGYRIVEDMASGLSHYL 304
Score = 155 (59.6 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 311 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 370
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 371 PHCNTEKCVGCLLC 384
Score = 135 (52.6 bits), Expect = 7.5e-40, Sum P(2) = 7.5e-40
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 61
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 62 -----DHLVKEDTGFIGFKNMEQIAE 82
>UNIPROTKB|Q8X643 [details] [associations]
symbol:preA "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreA" species:83334 "Escherichia coli O157:H7" [GO:0003954
"NADH dehydrogenase activity" evidence=ISS] [GO:0006208 "pyrimidine
nucleobase catabolic process" evidence=ISS] InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872
GO:GO:0051539 EMBL:AE005174 EMBL:BA000007 GenomeReviews:AE005174_GR
GenomeReviews:BA000007_GR GO:GO:0003954 GO:GO:0006222 GO:GO:0006208
GO:GO:0004158 TIGRFAMs:TIGR01037 HSSP:Q28943 eggNOG:COG0167
PIR:A85853 PIR:B64983 PIR:G91008 RefSeq:NP_288730.2
RefSeq:NP_311066.2 ProteinModelPortal:Q8X643
EnsemblBacteria:EBESCT00000026652 EnsemblBacteria:EBESCT00000059351
GeneID:916743 GeneID:956984 KEGG:ece:Z3402 KEGG:ecs:ECs3039
PATRIC:18355442 HOGENOM:HOG000225106 OMA:VDALEIN
ProtClustDB:PRK08318 BioCyc:ECOL386585:GJFA-2988-MONOMER
GO:GO:0004159 Uniprot:Q8X643
Length = 413
Score = 326 (119.8 bits), Expect = 7.5e-40, Sum P(2) = 7.5e-40
Identities = 74/207 (35%), Positives = 117/207 (56%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+LIASIM N+ W EL++ ++AGAD +E N SCP M MG GQ PE+V
Sbjct: 105 VLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 162
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGN-PWPAV 683
V+ +P K+TPNI ++ ++A AA G ADG++AINTV + ++ + P V
Sbjct: 163 RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIV 222
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFP---NFPILGIGGIDSADVALQFIQAGAH 740
K ++ G SG A +P+ L+ + + + P +FPI GIGGI++ + A +F+ GA
Sbjct: 223 NGK--SSISGYSGKAVKPIALRFIQQM-RTHPELRDFPISGIGGIETWEDAAEFLLLGAA 279
Query: 741 AVQICSAVQNQDFTVVDDYITGLQTLL 767
+Q+ + + + +V+D +GL L
Sbjct: 280 TLQVTTGIMQYGYRIVEDMASGLSHYL 306
Score = 155 (59.6 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 490 SVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQ 549
S+++++G A + +LD V IN D C+ CG+CY++C D G+QA+ + +T
Sbjct: 313 SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT 372
Query: 550 AHV-TDECTGCTLC 562
H T++C GC LC
Sbjct: 373 PHCNTEKCVGCLLC 386
Score = 135 (52.6 bits), Expect = 7.5e-40, Sum P(2) = 7.5e-40
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIV 406
D+S+ CG+KFPNPF L+S+P M +A++ GWG V KT + VSPR
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRF- 63
Query: 407 KGTTSRHLYGPEQG--SFLNIELISE 430
HL + G F N+E I+E
Sbjct: 64 -----DHLVKEDTGFIGFKNMEQIAE 84
>TIGR_CMR|BA_4023 [details] [associations]
symbol:BA_4023 "dihydroorotate oxidase" species:198094
"Bacillus anthracis str. Ames" [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=ISS] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=ISS] HAMAP:MF_00224
InterPro:IPR001295 InterPro:IPR005720 InterPro:IPR012135
InterPro:IPR013785 InterPro:IPR024920 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044205
GO:GO:0006207 GO:GO:0004158 TIGRFAMs:TIGR01037 eggNOG:COG0167
KO:K00226 RefSeq:NP_846264.1 RefSeq:YP_020665.1 RefSeq:YP_029986.1
HSSP:P54322 ProteinModelPortal:Q81WF4 SMR:Q81WF4 IntAct:Q81WF4
DNASU:1086679 EnsemblBacteria:EBBACT00000012435
EnsemblBacteria:EBBACT00000014239 EnsemblBacteria:EBBACT00000023393
GeneID:1086679 GeneID:2815297 GeneID:2850825 KEGG:ban:BA_4023
KEGG:bar:GBAA_4023 KEGG:bat:BAS3735 HOGENOM:HOG000225105
OMA:KATTANP ProtClustDB:PRK07259
BioCyc:BANT260799:GJAJ-3793-MONOMER
BioCyc:BANT261594:GJ7F-3911-MONOMER GO:GO:0004589 Uniprot:Q81WF4
Length = 309
Score = 272 (100.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 65/183 (35%), Positives = 112/183 (61%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNIS 624
+IA++ + +D++ ++K+ KA ALELN+SCP+ + G G+A G +PE+ +++
Sbjct: 96 IIANVAGS-QAEDYVAVAKEISKAPNVHALELNISCPNV--KTG-GIAFGTNPEIAADLT 151
Query: 625 LWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVG 684
V+ ++P +VKL+PN+ NI +IAKA ADG++ INT+ G+ P A
Sbjct: 152 KRVKEVSEVPVYVKLSPNVANIVEIAKAIENAGADGLTMINTLLGMRLDLKTAKPILANR 211
Query: 685 TKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQI 744
T GG+SG A +P+ ++ V +++ N PI+G+GGI++A+ ++F AGA AV +
Sbjct: 212 T------GGLSGPAIKPVAIRMVHEVSQAV-NIPIIGMGGIETAEDVIEFFYAGASAVAV 264
Query: 745 CSA 747
+A
Sbjct: 265 GTA 267
>TIGR_CMR|CHY_1497 [details] [associations]
symbol:CHY_1497 "dihydroorotate dehydrogenase, catalytic
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=ISS]
[GO:0009220 "pyrimidine ribonucleotide biosynthetic process"
evidence=ISS] HAMAP:MF_00224 InterPro:IPR001295 InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR024920
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
TIGRFAMs:TIGR01037 eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225105
GO:GO:0004589 RefSeq:YP_360329.1 ProteinModelPortal:Q3AC05
STRING:Q3AC05 GeneID:3726491 KEGG:chy:CHY_1497 PATRIC:21276123
OMA:RNPVMTA BioCyc:CHYD246194:GJCN-1496-MONOMER Uniprot:Q3AC05
Length = 307
Score = 269 (99.8 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 73/183 (39%), Positives = 107/183 (58%)
Query: 565 ILIASIMCTYNKDDWLELSKKTEKAGA-DALELNLSCPHGMGERGMGLACGQDPEMVRNI 623
ILI +I + +++ L+++ ++ ALELN+SCP+ +G G+A G D E ++ I
Sbjct: 94 ILILNI-AGESVEEFQYLAREAQRFDEIKALELNVSCPNV--SKG-GIAFGTDLEALKQI 149
Query: 624 SLWVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAV 683
VR VKLTPN+T+IT AKAA AD ++ INT +G++ + P +
Sbjct: 150 VSSVRKIYSKTLIVKLTPNVTDITVYAKAAENAGADALTLINTFTGMV-IDVKSKK-PIL 207
Query: 684 GTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQ 743
G K +GGVSG A RPM +K V K + PI+G+GGIDS + AL+F AGA A+Q
Sbjct: 208 GNK----HGGVSGPAIRPMAVKMVYDCFKAV-SIPIIGVGGIDSKEAALEFFLAGATAIQ 262
Query: 744 ICS 746
+ S
Sbjct: 263 VGS 265
>TIGR_CMR|GSU_3057 [details] [associations]
symbol:GSU_3057 "glutamate synthase (NADPH),
homotetrameric" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000031439
Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
OMA:AYRRTIN InterPro:IPR006004 TIGRFAMs:TIGR01316
RefSeq:NP_954099.1 ProteinModelPortal:Q748E7 GeneID:2686900
KEGG:gsu:GSU3057 PATRIC:22028965
BioCyc:GSUL243231:GH27-2997-MONOMER Uniprot:Q748E7
Length = 470
Score = 283 (104.7 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 85/292 (29%), Positives = 146/292 (50%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP ++ EV + LGV +EC + + +T+ +LR++ + A+FI N
Sbjct: 192 IPEFRLPKTIIDAEVARLLALGVTVECNVIIG-KTLTLAQLREE-FDAVFIA----NGAG 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGT-VIVLGAGDTAF 160
+P+ + E G Y++ +L RV PI+ G V V+G G+TA
Sbjct: 246 LPVMLSIPGENLKGVYSANEYLTRV----NLMGAGRDPGSTTPIIAGKRVAVIGGGNTAM 301
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDV-KDNKIA 219
DC +A R GA + ++++R+ + A EE++ A EE EF+ +P+ + KD +A
Sbjct: 302 DCVRTARRLGAERAMIIYRRSEEQMPARVEEIKHAKEEGVEFVMLTAPIAIGGDKDGWVA 361
Query: 220 GMQFNRTE---QNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-VKLDK 273
++ R E + G V E + + +++A G+ N +L A P +KL++
Sbjct: 362 TLRCLRMELGAPDSSGRRSPVPVEGSAYDIAVDVVVNAVGTRA--NPLLTATAPELKLNR 419
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+G + ATSV GV+ GGD T + ++ DGK AA IH ++ +
Sbjct: 420 WGNIATD-DNGATSVAGVYAGGDIVRGGATVILAMGDGKQAAAAIHDWLNRR 470
>TIGR_CMR|DET_1372 [details] [associations]
symbol:DET_1372 "dihydroorotate dehydrogenase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00224 InterPro:IPR001295 InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR024920
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
TIGRFAMs:TIGR01037 eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225105
ProtClustDB:PRK07259 OMA:PILANKT RefSeq:YP_182083.1
ProteinModelPortal:Q3Z6R6 STRING:Q3Z6R6 GeneID:3229327
KEGG:det:DET1372 PATRIC:21609771
BioCyc:DETH243164:GJNF-1373-MONOMER Uniprot:Q3Z6R6
Length = 310
Score = 255 (94.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 62/172 (36%), Positives = 102/172 (59%)
Query: 577 DDWLELSKKTEKA-GADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+D+ EL+++ +K G +E+N+SCP+ + G + G PE ++ VR++ +P
Sbjct: 113 EDYAELARRLDKVPGVSGIEVNISCPNV--KCGC-IEFGSSPESAARVTDAVRNATTLPL 169
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
+KLTPN ++IT++A+A + AD +S INT+ G M + P +G GG+S
Sbjct: 170 IIKLTPNTSSITELARAVADAGADAISLINTLRG-MRIDIKKRR-PILGNHT----GGLS 223
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ + V ++ N P++G GGI +A+ AL+FI AGA AVQI +A
Sbjct: 224 GPAIKPVAVSMVYQVSGAV-NVPVIGGGGIMNAEDALEFIMAGATAVQIGTA 274
>UNIPROTKB|P54322 [details] [associations]
symbol:pyrDB "Dihydroorotate dehydrogenase B (NAD(+)),
catalytic subunit" species:416870 "Lactococcus lactis subsp.
cremoris MG1363" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_00224 InterPro:IPR001295 InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR024920
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AM406671
GenomeReviews:AM406671_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
TIGRFAMs:TIGR01037 eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225105
ProtClustDB:PRK07259 GO:GO:0004589 EMBL:X74207
RefSeq:YP_001032420.1 PDB:1EP1 PDB:1EP2 PDB:1EP3 PDBsum:1EP1
PDBsum:1EP2 PDBsum:1EP3 ProteinModelPortal:P54322 SMR:P54322
IntAct:P54322 MINT:MINT-159259 STRING:P54322 GeneID:4798332
KEGG:llm:llmg_1106 PATRIC:22283360 OMA:PILANKT
EvolutionaryTrace:P54322 Uniprot:P54322
Length = 311
Score = 247 (92.0 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 64/182 (35%), Positives = 103/182 (56%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IA++ + D +K + A A+ELN+SCP+ + G G A G DPE+ +
Sbjct: 101 IIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNV--KHG-GQAFGTDPEVAAALVK 157
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
++ K+P +VKL+PN+T+I IAKA ADG++ INT+ G+ P A
Sbjct: 158 ACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILA--- 214
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
+T GG+SG A +P+ LK + +A++ + PI+G+GG+ +A L+ AGA AV +
Sbjct: 215 -NIT--GGLSGPAIKPVALKLIHQVAQVV-DIPIIGMGGVANAQDVLEMYMAGASAVAVG 270
Query: 746 SA 747
+A
Sbjct: 271 TA 272
>TIGR_CMR|GSU_1755 [details] [associations]
symbol:GSU_1755 "dihydroorotate dehydrogenase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00224 InterPro:IPR001295 InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR024920
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
TIGRFAMs:TIGR01037 eggNOG:COG0167 KO:K00226 HSSP:P54322
HOGENOM:HOG000225105 ProtClustDB:PRK07259 GO:GO:0004589 OMA:RNPVMTA
RefSeq:NP_952805.1 ProteinModelPortal:Q74CB9 GeneID:2687066
KEGG:gsu:GSU1755 PATRIC:22026355
BioCyc:GSUL243231:GH27-1731-MONOMER Uniprot:Q74CB9
Length = 305
Score = 239 (89.2 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 61/172 (35%), Positives = 105/172 (61%)
Query: 577 DDWLELSKKTEKAG-ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
+++ EL+++ + A+E+N+SCP+ + G G+ G DP+ ++ VR + P
Sbjct: 108 EEYAELAERLDLIPEVAAVEINISCPNV--KHG-GIVFGTDPKAAYSVVKAVREATIKPV 164
Query: 636 FVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVS 695
VKL+PN+T+I ++A A + +AD +S INT++G M++ D P + +T GG+S
Sbjct: 165 IVKLSPNVTDIVEMAWACADAEADALSLINTLTG-MAIDLDKRR-PILAN--VT--GGLS 218
Query: 696 GNATRPMGLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSA 747
G A +P+ L+ V +A+ P++GIGGI + AL+F+ AGA AVQ+ +A
Sbjct: 219 GPAVKPIALRMVWQVARAV-KIPVIGIGGIMTGIDALEFMLAGATAVQVGTA 269
>TIGR_CMR|CHY_1991 [details] [associations]
symbol:CHY_1991 "glutamate synthase (NADPH),
homotetrameric" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0004355 "glutamate synthase (NADPH) activity"
evidence=ISS] [GO:0006537 "glutamate biosynthetic process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749 RefSeq:YP_360810.1
ProteinModelPortal:Q3AAM4 STRING:Q3AAM4 GeneID:3728589
KEGG:chy:CHY_1991 PATRIC:21277069 OMA:AYRRTIN
BioCyc:CHYD246194:GJCN-1990-MONOMER InterPro:IPR006004
TIGRFAMs:TIGR01316 Uniprot:Q3AAM4
Length = 464
Score = 254 (94.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 83/293 (28%), Positives = 143/293 (48%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLR-KDGYTAIFIGIGKPNAN 102
IP++RLP V E++ +K LGV+I+ + + +T+++L ++GY A+F+G G
Sbjct: 184 IPEFRLPKRIVQQEIDNLKKLGVEIKTNTVIG-KSLTVDELLDEEGYDAVFVGTGAG--- 239
Query: 103 VIPIFQGLTEEM--GFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGT-VIVLGAGDTA 159
+P F G+ E G Y++ FL R PI G V VLGAG+ A
Sbjct: 240 -LPNFMGIPGENLNGVYSANEFLTRT----NLMKAYLFPEYDTPIKVGEKVAVLGAGNVA 294
Query: 160 FDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK-I 218
D A +ALR GA +V +V+R+ + A EE+ A EE +F+ +P ++ +N +
Sbjct: 295 MDAARTALRLGAKEVYIVYRRSRNEMPARLEEIHHAEEEGVKFMLLTNPTRIIGDENGWV 354
Query: 219 AGMQ---FNRTEQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVL-EAIKPVKLD 272
M+ + E +E G V ++ + ++ A G + N ++ K +++
Sbjct: 355 KAMECLKYELGEPDESGRRSPVPIPGSEFIIEVDTVVVAIGQS--PNPLVPRTTKGLEVG 412
Query: 273 KYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEK 325
+ G + T GV+ GGD + T ++++ GK AA IH+Y+ K
Sbjct: 413 RKGNIIADENGKTTR-EGVWAGGDIVTGAATVIKAMGAGKKAARAIHEYLMSK 464
>UNIPROTKB|P09832 [details] [associations]
symbol:gltD "glutamate synthase, small subunit"
species:83333 "Escherichia coli K-12" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0097054 "L-glutamate
biosynthetic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA;IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 PROSITE:PS51379 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 EMBL:U18997 GO:GO:0051539
GO:GO:0006537 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 GO:GO:0097054 EMBL:M18747 BRENDA:1.4.1.13
PIR:G65112 RefSeq:NP_417680.1 RefSeq:YP_491398.1
ProteinModelPortal:P09832 SMR:P09832 DIP:DIP-9803N IntAct:P09832
MINT:MINT-1248739 SWISS-2DPAGE:P09832 PaxDb:P09832 PRIDE:P09832
EnsemblBacteria:EBESCT00000004091 EnsemblBacteria:EBESCT00000017797
GeneID:12933433 GeneID:947723 KEGG:ecj:Y75_p3133 KEGG:eco:b3213
PATRIC:32121848 EchoBASE:EB0399 EcoGene:EG10404 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 BioCyc:EcoCyc:GLUSYNSMALL-MONOMER
BioCyc:ECOL316407:JW3180-MONOMER BioCyc:MetaCyc:GLUSYNSMALL-MONOMER
BioCyc:MOB3B:GLUSYNSMALL-MONOMER Genevestigator:P09832
Uniprot:P09832
Length = 472
Score = 250 (93.1 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 87/294 (29%), Positives = 140/294 (47%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L + + E+ +G++ + + RD+ ++ L D Y A+F+G+G +
Sbjct: 189 IPAFKLEKEVMTRRREIFTGMGIEFKLNTEVG-RDVQLDDLLSD-YDAVFLGVGTYQS-- 244
Query: 104 IPIFQGLTEEM--GFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGT-VIVLGAGDTAF 160
+ GL E G Y + FL +A ++G V+VLG GDTA
Sbjct: 245 --MRGGLENEDADGVYAALPFL--IANTKQLMGFGETRDEPFVSMEGKRVVVLGGGDTAM 300
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
DC +++R GA V +R+ N+ EV+ A EE EF + P+ ++V N K++
Sbjct: 301 DCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVS 360
Query: 220 GMQFNRTEQNE---KG----EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLD 272
G++ RTE E KG E V E + A+ +I AFG + + L A V+LD
Sbjct: 361 GVKMVRTEMGEPDAKGRRRAEIVAGSEHIVP--ADAVIMAFGFRPHNMEWL-AKHSVELD 417
Query: 273 KYGY---PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
G PE + TS P +F GGD SD V ++ +G+ AA I +++
Sbjct: 418 SQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLE 471
>TIGR_CMR|DET_0038 [details] [associations]
symbol:DET_0038 "glutamate synthase (NADPH),
homotetrameric" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
InterPro:IPR006004 TIGRFAMs:TIGR01316 RefSeq:YP_180793.1
ProteinModelPortal:Q3ZAF6 STRING:Q3ZAF6 GeneID:3229074
KEGG:det:DET0038 PATRIC:21607179 OMA:CSANEFL
BioCyc:DETH243164:GJNF-38-MONOMER Uniprot:Q3ZAF6
Length = 465
Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 83/289 (28%), Positives = 137/289 (47%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++RLP D V E+E VK LGV +E S++ R ++E L K G+ A+F+ G
Sbjct: 186 IPEFRLPKDIVQGEIEYVKSLGVTLELN-SVAGRLFSLEDLFKQGFQAVFLATGAG---- 240
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGT-VIVLGAGDTAF 160
+P+F + E G Y++ FL RV P+ KG V V+G G+ A
Sbjct: 241 LPLFLNVQGENLSGVYSANEFLTRV----NLMKAHNFPSSDTPVKKGRKVAVIGGGNVAM 296
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
D A ALR GA +V +V+R+ + A EEV A EE +F SPV+ + ++
Sbjct: 297 DAARCALRLGAEEVSIVYRRSELELPARKEEVDNAREEGIKFHFLTSPVRFLANEQGQVR 356
Query: 220 GMQFNRT---EQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
M+ + E + G + ++ + + A G T + V+++ ++++
Sbjct: 357 AMECQKMALGEPDASGRRRPIPVGGSEFEMDIDLAVIALG-TRPNPLVMQSAPDLQVNSN 415
Query: 275 GYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
G + TS V+ GGD SDT + ++ K +A I +Y++
Sbjct: 416 GTVLADINGQ-TSHRAVWAGGDIVTGSDTVISAMGAAKRSAVVIDEYLR 463
>UNIPROTKB|Q9KPJ0 [details] [associations]
symbol:VC_2377 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 226 (84.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 80/292 (27%), Positives = 135/292 (46%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L + + ++G++ + +DIT+++L D Y A+F+G+G
Sbjct: 190 IPSFKLEKGVMENRRRIFSEMGIEFRLNVEVG-QDITLQQLL-DEYDAVFLGVGTYQY-- 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFD 161
+ GL E G Y + LP + + + V+VLG GDTA D
Sbjct: 246 --MRAGLANEDAPGVYDA---LPFLISNTYKVMELNNEAPFIDMAGKNVVVLGGGDTAMD 300
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVK-DNKIAG 220
C +++R GA++V+ +R+ N+ EV+ A EE EF+ + P+ ++V ++ G
Sbjct: 301 CVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTG 360
Query: 221 MQFNRTEQNE-------KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDK 273
++ +T E K E V E L A+ +I AFG LE V+LD+
Sbjct: 361 VKVVKTALGEPDAAGRRKPEPVAGSEH--VLPADAVIMAFGFQPHKMAWLEPFD-VELDQ 417
Query: 274 YGY---PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+G P T+ P +F GGD SD V ++++G+ AA I Y+
Sbjct: 418 WGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 469
>TIGR_CMR|VC_2377 [details] [associations]
symbol:VC_2377 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 226 (84.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 80/292 (27%), Positives = 135/292 (46%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L + + ++G++ + +DIT+++L D Y A+F+G+G
Sbjct: 190 IPSFKLEKGVMENRRRIFSEMGIEFRLNVEVG-QDITLQQLL-DEYDAVFLGVGTYQY-- 245
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFD 161
+ GL E G Y + LP + + + V+VLG GDTA D
Sbjct: 246 --MRAGLANEDAPGVYDA---LPFLISNTYKVMELNNEAPFIDMAGKNVVVLGGGDTAMD 300
Query: 162 CATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVK-DNKIAG 220
C +++R GA++V+ +R+ N+ EV+ A EE EF+ + P+ ++V ++ G
Sbjct: 301 CVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTG 360
Query: 221 MQFNRTEQNE-------KGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDK 273
++ +T E K E V E L A+ +I AFG LE V+LD+
Sbjct: 361 VKVVKTALGEPDAAGRRKPEPVAGSEH--VLPADAVIMAFGFQPHKMAWLEPFD-VELDQ 417
Query: 274 YGY---PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+G P T+ P +F GGD SD V ++++G+ AA I Y+
Sbjct: 418 WGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 469
>TIGR_CMR|SO_1324 [details] [associations]
symbol:SO_1324 "glutamate synthase, small subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
Pfam:PF00070 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006537
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK12810
OMA:NDFQFID RefSeq:NP_716944.1 ProteinModelPortal:Q8EHA5
GeneID:1169145 KEGG:son:SO_1324 PATRIC:23522304 Uniprot:Q8EHA5
Length = 468
Score = 224 (83.9 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 75/289 (25%), Positives = 134/289 (46%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L + +++ +G++ + ++ +D+ +L ++ Y A+F+G+G A
Sbjct: 188 IPAFKLDKAVMATRRTVLEGMGIEFKLGVTVG-KDVAFNQLLEE-YDAVFLGMGTYTAMK 245
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCA 163
+ +G + G Y + +L + + V+VLG GDTA DC
Sbjct: 246 AGL-EG-EDAQGVYQALPYL--IGNTHHLMGSTSPDMPYLNLAGKRVVVLGGGDTAMDCV 301
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQF 223
+A+R GA+ V+ +R+ N+ EVQ A EE FL PV + +D K+ G++
Sbjct: 302 RTAVRQGASSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQPVAIKTQDGKVLGVEC 361
Query: 224 NRTEQN-------EKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGY 276
T+ ++ E + EQ L+A+ +I AFG A ++LD++G
Sbjct: 362 VETQMGKADASGRQRAEAIVGSEQL--LEADAVIIAFGFQPSPAPWF-ADYGIELDQWGR 418
Query: 277 PEVNYTT---MATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
+ + T+ P VF GGD SD V ++ +G+ AA I Y+
Sbjct: 419 VKASKQADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILNYL 467
>UNIPROTKB|P37127 [details] [associations]
symbol:aegA species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009987 "cellular process"
evidence=ND] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR006006 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 InterPro:IPR017900
Prosite:PS00198 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 EMBL:L34011 PIR:C65022 RefSeq:NP_416963.1
RefSeq:YP_490695.1 ProteinModelPortal:P37127 SMR:P37127
DIP:DIP-9060N IntAct:P37127 PRIDE:P37127
EnsemblBacteria:EBESCT00000003403 EnsemblBacteria:EBESCT00000017287
GeneID:12931935 GeneID:947383 KEGG:ecj:Y75_p2420 KEGG:eco:b2468
PATRIC:32120319 EchoBASE:EB2308 EcoGene:EG12409
HOGENOM:HOG000031439 OMA:VESRYRY ProtClustDB:PRK12769
BioCyc:EcoCyc:EG12409-MONOMER BioCyc:ECOL316407:JW2452-MONOMER
Genevestigator:P37127 GO:GO:0016639 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 Uniprot:P37127
Length = 659
Score = 218 (81.8 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 82/296 (27%), Positives = 136/296 (45%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L + E+ +G+ E + +D++++ L + Y A+F+G+G +
Sbjct: 370 IPSFKLDKSLLARRREIFSAMGIHFELNCEVG-KDVSLDSLLEQ-YDAVFVGVGTYRS-- 425
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKG-TVIVLGAGDTAF 160
+ GL E G Y + FL +A G V+VLG GDTA
Sbjct: 426 --MKAGLPNEDAPGVYDALPFL--IANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAM 481
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDN-KIA 219
DC +ALR GA+ V +R+ N+ +EV+ A EE F + PV +++ + +
Sbjct: 482 DCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVC 541
Query: 220 GMQFNRT---EQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
G++F RT E + +G V E + A+ +I AFG LE+ V +DK+
Sbjct: 542 GIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLES-HGVTVDKW 600
Query: 275 GY----PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKN 326
G E Y T+ P +F GGD +D V ++ +G+ AA I ++ K+
Sbjct: 601 GRIIADVESQYRYQTTN-PKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKS 655
>UNIPROTKB|Q4KJI5 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK12810 RefSeq:YP_257598.1 ProteinModelPortal:Q4KJI5
STRING:Q4KJI5 GeneID:3481045 KEGG:pfl:PFL_0454 PATRIC:19870053
OMA:NDFQFID BioCyc:PFLU220664:GIX8-455-MONOMER Uniprot:Q4KJI5
Length = 472
Score = 214 (80.4 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 78/290 (26%), Positives = 135/290 (46%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+++L ++ E+ +G++ + +D+T+E+L + Y A+F+G+G +
Sbjct: 192 IPEFKLEKTVLSNRREVFSGMGIEFRLNTEVG-KDVTMEQLLAE-YDAVFMGMGT-YTYM 248
Query: 104 IPIFQGLTEEM-GFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDC 162
F G E++ G Y + FL +A + V+VLG GDTA DC
Sbjct: 249 KGGFAG--EDLPGVYDALDFL--IANVNRNLGFEKSPEDFVDMKGKKVVVLGGGDTAMDC 304
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQ 222
+++R GA V +R+ N+ +EV+ A EE +FL P+ + V ++++ G++
Sbjct: 305 NRTSIRQGAKSVTCAYRRDEANMPGSRKEVKNAKEEGVKFLYNRQPIAI-VGEDRVEGVK 363
Query: 223 FNRT---EQNEKG----EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYG 275
T E + +G E + E+ I A+ ++ AFG E ++ D G
Sbjct: 364 VVETRLGEPDARGRRSPEPIPGSEEIIP--ADAVVIAFGFRPSPAPWFEQFS-IQTDSQG 420
Query: 276 Y---PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYI 322
PE TS P +F GGD SD V ++ +G+ AA I Y+
Sbjct: 421 RVVAPEQGQFKHQTSNPKIFAGGDMVRGSDLVVTAIFEGRNAAEGILDYL 470
>TIGR_CMR|CPS_4502 [details] [associations]
symbol:CPS_4502 "glutamate synthase, small subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 RefSeq:YP_271150.1
ProteinModelPortal:Q47VM2 STRING:Q47VM2 GeneID:3522364
KEGG:cps:CPS_4502 PATRIC:21471827
BioCyc:CPSY167879:GI48-4511-MONOMER Uniprot:Q47VM2
Length = 475
Score = 214 (80.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 82/298 (27%), Positives = 135/298 (45%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L + E+++ +G++ ++ T DI+ + + D Y A+F+G+G
Sbjct: 189 IPSFKLEKSVIQTRREILEGMGIEFRLNINVGT-DISFKDI-SDEYDAVFLGLG----TY 242
Query: 104 IPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILK---GTVIVLGAGDT 158
+ G E G Y + FL T P + VIVLG GDT
Sbjct: 243 TDMSGGFDNEGAQGVYNALDFLIG-NTQNLMGFTKADNAQVKPYVNFKDKKVIVLGGGDT 301
Query: 159 AFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKI 218
A DC +++R A V +R+ N+ P EVQ A EE F + P+ + V + +
Sbjct: 302 AMDCVRTSIRQDATSVTCAYRRDEANMPGSPREVQNAKEEGVNFEFNLQPLDIAVNEQGV 361
Query: 219 A-GMQFNRTE---QNEKG----EWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKP-V 269
A G++F +T+ + G E + D E ++A+ ++ AFG L + + V
Sbjct: 362 AIGVKFVKTQLGSPDANGRRNPEPIADSE--FIMEADAVVIAFG--FLPSPPQWMVDAGV 417
Query: 270 KLDKYG-YPEVNYTTMA--TSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE 324
+LD G V+ + A TS VF GGD SD V +++ G+ AA I Y+ +
Sbjct: 418 ELDSRGRVVAVDSSDFALQTSKQNVFAGGDMVLGSDLVVTAIDQGQKAAMGILDYVTQ 475
>UNIPROTKB|Q0C617 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR006006 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 EMBL:CP000158 GenomeReviews:CP000158_GR
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_758826.1 ProteinModelPortal:Q0C617 STRING:Q0C617
GeneID:4289253 KEGG:hne:HNE_0092 PATRIC:32212968 OMA:ANIDNEN
BioCyc:HNEP228405:GI69-139-MONOMER Uniprot:Q0C617
Length = 481
Score = 211 (79.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 71/282 (25%), Positives = 122/282 (43%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L D V + ++ G+ + D+++ LR+ + + I G A
Sbjct: 190 IPGFKLEKDVVERRIHHLEASGISFRFNTRIGA-DMSLADLREQ-HDTVLIATGVYAAKD 247
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCA 163
+ G+ E G + +L V+V+G GDTA DC
Sbjct: 248 LKC-PGVGAE-GVLPALDYLTASNRVDLGDTVEAYDAGVLNAEGKRVVVIGGGDTAMDCV 305
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV-DVKDNKIAGMQ 222
+A+R GA V ++R+ N+ EVQ A EE F +P + D K K+ ++
Sbjct: 306 RTAIRQGAKSVTCLYRRDRVNMPGSQREVQNAEEEGVVFEWLANPEAIIDSKGGKVKAVR 365
Query: 223 FNRTEQNE---KGEWVEDEE-QRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPE 278
+R + E G + + +KA+ +I A G D L + ++++G
Sbjct: 366 ASRMKLGEPDASGRQSPVKTGETFDVKADMVIKALGFDPEDLPALFNETSLTVNRWGAVR 425
Query: 279 VNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHK 320
V+Y T+ TS+PGV+ GD + V ++ DG+ AA +HK
Sbjct: 426 VDYATLETSLPGVYAAGDIVRGASLVVWAIKDGRDAAEAMHK 467
>UNIPROTKB|Q46811 [details] [associations]
symbol:ygfK "predicted oxidoreductase, Fe-S subunit"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA;TAS] InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 Pfam:PF13187 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 Gene3D:3.20.20.70 GO:GO:0005506
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016491 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 EMBL:U28375 SUPFAM:SSF46548 PIR:F65071
RefSeq:NP_417354.1 RefSeq:YP_491080.1 ProteinModelPortal:Q46811
SMR:Q46811 DIP:DIP-28091N IntAct:Q46811 PRIDE:Q46811
EnsemblBacteria:EBESCT00000000821 EnsemblBacteria:EBESCT00000015587
GeneID:12933331 GeneID:949068 KEGG:ecj:Y75_p2811 KEGG:eco:b2878
PATRIC:32121166 EchoBASE:EB2873 EcoGene:EG13061
HOGENOM:HOG000277437 KO:K12527 OMA:CPNRANI ProtClustDB:PRK09853
BioCyc:EcoCyc:G7497-MONOMER BioCyc:ECOL316407:JW5923-MONOMER
Genevestigator:Q46811 InterPro:IPR017701 TIGRFAMs:TIGR03315
Uniprot:Q46811
Length = 1032
Score = 173 (66.0 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 55/168 (32%), Positives = 84/168 (50%)
Query: 150 VIVLGAGDTAFDCATSALRC-GANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSP 208
V+V+GAG+TA DCA +ALR G K +V+R+ + A EE + A + EF +P
Sbjct: 681 VVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNP 740
Query: 209 VQVDVKDNKIAGMQFNRTEQNEKGEW--VEDEEQRIKLKANYIISAFGSTLLDNDVLEAI 266
+ D D + + E +EKG VE E + L + +I+A G D + L A+
Sbjct: 741 ERFDA-DGTLTLRVMSLGEPDEKGRRRPVETNET-VTLLVDSLITAIGEQQ-DTEALNAM 797
Query: 267 KPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTA 314
V LDK G+P+V++ T + VF GD + V +V + A
Sbjct: 798 G-VPLDKNGWPDVDHNG-ETRLTDVFMIGDVQRGPSSIVAAVGTARRA 843
Score = 87 (35.7 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIG 97
IPQ+R+P + + +++ V GVK E S D+TIE+L+ G+ + I G
Sbjct: 593 IPQFRIPAELIQHDIDFVAAHGVKFEYGCS---PDLTIEQLKNQGFHYVLIATG 643
Score = 41 (19.5 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 510 NKKQVVALINDDMCINCGKCYMACNDSG 537
N+ Q + L D C CG C C +G
Sbjct: 927 NRFQTLHL--DAYCNECGNCAQFCPWNG 952
>TIGR_CMR|CPS_2800 [details] [associations]
symbol:CPS_2800 "dihydroorotate dehydrogenase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00225 InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005886 Gene3D:3.20.20.70 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225103 OMA:ALNRMGF
TIGRFAMs:TIGR01036 RefSeq:YP_269512.1 ProteinModelPortal:Q480K7
SMR:Q480K7 STRING:Q480K7 GeneID:3521813 KEGG:cps:CPS_2800
PATRIC:21468637 BioCyc:CPSY167879:GI48-2861-MONOMER Uniprot:Q480K7
Length = 336
Score = 166 (63.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 57/195 (29%), Positives = 95/195 (48%)
Query: 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGM--GLACGQDPEMVR--NISLWVRSSV 631
KDD+L +K A + +N+S P+ G R + G A + ++ L +
Sbjct: 152 KDDYLHCMRKVYDL-ATYITVNISSPNTPGLRSLQYGDALNELLAALKAEQTILTEKYGK 210
Query: 632 KIPFFVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689
IP VK+ P++T + IAK+ + DGV A NT +LS +G GT++
Sbjct: 211 YIPLAVKIAPDLTGDEVKSIAKSLIDNGIDGVIATNT-----TLSREGVEGLQFGTEQ-- 263
Query: 690 TYGGVSGNATRPMGLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
GG+SG + + +++ N PI+G+GGI S+D A + ++AGA VQ+ +
Sbjct: 264 --GGLSGQPVKEKSTLVIKLLSEALNNKLPIIGVGGIASSDDANEKLEAGASLVQVYTGF 321
Query: 749 QNQDFTVVDDYITGL 763
Q +V + + GL
Sbjct: 322 IYQGPPLVKEIVNGL 336
Score = 64 (27.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 347 DISVEICGLKFPNPFGLASAPPTTASSMVRRAFEN-GWGFAVTKTFSLQKDMVTNVSPRI 405
D + + G+ FPNP GLA+ + AF+ G+GF T + + N PRI
Sbjct: 44 DKPLTVMGINFPNPVGLAAGLDKNGECI--NAFDAMGFGFVEVGTVT-PRPQPGNDKPRI 100
Query: 406 VK 407
+
Sbjct: 101 FR 102
>UNIPROTKB|Q46820 [details] [associations]
symbol:ygfT "fused predicted oxidoreductase, Fe-S subunit
and nucleotide-binding subunit" species:83333 "Escherichia coli
K-12" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001327 InterPro:IPR001450 InterPro:IPR006006
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR023753
Pfam:PF00037 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 GO:GO:0016639
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 EMBL:U28375 PIR:G65072
RefSeq:NP_417363.2 RefSeq:YP_491088.1 ProteinModelPortal:Q46820
SMR:Q46820 DIP:DIP-12175N PRIDE:Q46820
EnsemblBacteria:EBESCT00000001813 EnsemblBacteria:EBESCT00000017804
GeneID:12933341 GeneID:949018 KEGG:ecj:Y75_p2819 KEGG:eco:b2887
PATRIC:32121182 EchoBASE:EB2881 EcoGene:EG13070 OMA:KVVPRIE
ProtClustDB:PRK12809 BioCyc:EcoCyc:G7506-MONOMER
BioCyc:ECOL316407:JW5469-MONOMER Genevestigator:Q46820
Uniprot:Q46820
Length = 639
Score = 180 (68.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 73/284 (25%), Positives = 121/284 (42%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP ++L ++ E+ +G+ + RDIT L + Y A+FIG+G +
Sbjct: 353 IPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG-RDITFSDLTSE-YDAVFIGVG--TYGM 408
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPI--LKGT-VIVLGAGDTAF 160
+ + G + FL T P+ ++G V+VLG GDT
Sbjct: 409 MRADLPHEDAPGVIQALPFL----TAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTM 464
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDV-KDNKIA 219
DC +++R A V +R+ ++ +EV A EE EF + P + +D ++
Sbjct: 465 DCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLT 524
Query: 220 GMQFNRTEQNEKGEWVEDEEQRI-----KLKANYIISAFGSTLLDNDVLEAIKPVKLDKY 274
+ RT E G + + +L A+ +I AFG L+ +KLDK+
Sbjct: 525 AVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQG-SGIKLDKW 583
Query: 275 GY---PEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA 315
G +V Y T + VF GGD + +D V ++ G+ AA
Sbjct: 584 GLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAA 627
>TIGR_CMR|SPO_1776 [details] [associations]
symbol:SPO_1776 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008152 "metabolic process" evidence=ISS] [GO:0015036
"disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR000103 InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 PRINTS:PR00469
InterPro:IPR016040 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK11749 RefSeq:YP_167013.1 ProteinModelPortal:Q5LSJ2
GeneID:3193113 KEGG:sil:SPO1776 PATRIC:23376877 OMA:PKPGGLN
Uniprot:Q5LSJ2
Length = 445
Score = 169 (64.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 78/292 (26%), Positives = 124/292 (42%)
Query: 33 RPVAALPDSSEIPQYRLPFDAVNFEVELVKDLG-VKIECERSLSTRDITIEKLRKDGYTA 91
RP A + I Y+ EV+ + +G + +E +L + +T++ LR GY A
Sbjct: 175 RPKAGGLNEFGIAAYKATGGFAGTEVDWLLQIGGITVEQGSALG-QGLTLDALRA-GYDA 232
Query: 92 IFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVI 151
+F+ IG N + G ++ G + F+ + P+ + V+
Sbjct: 233 VFLSIGLAGVNALRA-AGEDKD-GVRDAVDFIAELRQAGDLSAL--------PVGRN-VV 281
Query: 152 VLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQV 211
V+G G TA D A + GA V V +R+ + A E LA + + + PV V
Sbjct: 282 VIGGGMTAIDAAVQSKLLGAENVTVAYRRSRAEMGASGFEQDLAASKGVRLMFNVMPVAV 341
Query: 212 DVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL---DNDVLEAIKP 268
A ++ G V + ++L A+ + A G TL + LE K
Sbjct: 342 HGNG---AAVEIELEYTTSAGGSVTGTGETVRLAADQVFKAIGQTLEGVPEGLELEGRK- 397
Query: 269 VKLDKYGYPEVNYTTMATSVPGVFCGGDTANLS-DTTVESVNDGKTAAWHIH 319
+K+D G TSVPGV+ GGD A+ D TV +V +G+ AA IH
Sbjct: 398 IKVDGSG---------RTSVPGVWAGGDCASGGEDLTVTAVAEGRDAAMDIH 440
>TIGR_CMR|SO_2592 [details] [associations]
symbol:SO_2592 "dihydroorotate dehydrogenase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00225 InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005886 Gene3D:3.20.20.70 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225103 OMA:ALNRMGF
TIGRFAMs:TIGR01036 ProtClustDB:PRK05286 RefSeq:NP_718178.1
ProteinModelPortal:Q8EDZ8 SMR:Q8EDZ8 GeneID:1170294
KEGG:son:SO_2592 PATRIC:23524811 Uniprot:Q8EDZ8
Length = 339
Score = 152 (58.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEM----VRNISLWVRSSV 631
KDD+L K A + +N+S P+ G R + D + + + L +
Sbjct: 152 KDDYLICMDKVYLHAA-YIAVNISSPNTPGLRSLQYGDLLDELLSAIKAKQLELADKHKK 210
Query: 632 KIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689
+P +K+ P++T I +IA+A + + DG A NT +L+ DG G
Sbjct: 211 YVPIALKIAPDLTIEEIENIAQALIKNQFDGAIATNT-----TLTRDG----VSGLANAN 261
Query: 690 TYGGVSGNATRPMGLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICS 746
GG+SG + K + +A PI+G+GGI+SA+ AL AGA VQI S
Sbjct: 262 ESGGLSGKPLTELSTKVIKQLATCLQGQIPIIGVGGINSAEDALAKFDAGATMVQIYS 319
Score = 54 (24.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 350 VEICGLKFPNPFGLASAPPTTASSMVRRAFEN-GWGFAVTKTFSLQKDMVTNVSPRIVK 407
V GL FPNP GLA+ S+ AF G+G T + + N PR+ +
Sbjct: 47 VSFMGLTFPNPVGLAAGMDKDGESI--DAFHAMGFGHVEVGTVT-PRPQPGNDLPRLFR 102
>ZFIN|ZDB-GENE-030131-3157 [details] [associations]
symbol:dhodh "dihydroorotate dehydrogenase"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] HAMAP:MF_00225
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 ZFIN:ZDB-GENE-030131-3157 GO:GO:0016020
Gene3D:3.20.20.70 GO:GO:0006207 GO:GO:0006222 GO:GO:0004158
eggNOG:COG0167 HOGENOM:HOG000225103 KO:K00254 TIGRFAMs:TIGR01036
CTD:1723 HOVERGEN:HBG006898 OrthoDB:EOG47WNNW EMBL:BC086819
IPI:IPI00493178 RefSeq:NP_001008608.1 UniGene:Dr.78743
ProteinModelPortal:Q5PR57 SMR:Q5PR57 STRING:Q5PR57 GeneID:494065
KEGG:dre:494065 InParanoid:Q5PR57 NextBio:20865576
ArrayExpress:Q5PR57 Uniprot:Q5PR57
Length = 407
Score = 145 (56.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 76/268 (28%), Positives = 118/268 (44%)
Query: 511 KKQVVALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLCLSILIASI 570
K +V L +D IN Y N G A+ + + HV E T L I +
Sbjct: 129 KPRVFRLESDQAVINR---Y-GFNSCGLSAVHERLKARE-HVQSELTKAGKPLGINLGKN 183
Query: 571 MCTYNK-DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV-- 627
+ + D++E +T AD L +N+S P+ G R + Q E +R++ V
Sbjct: 184 KLSPDAVSDYVE-GVRTLGPLADYLVVNVSSPNTPGLRDL-----QGKEELRHLLDKVVK 237
Query: 628 -RSSVKI----PFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPW 680
R S++I P VK+ P++T + DIA+ E DGV NT D N
Sbjct: 238 ERDSLRIENRPPVLVKIAPDLTTQDKQDIAEVIMEVGVDGVMVSNTTVSRPDTLKDPN-- 295
Query: 681 PAVGTKKLTTYGGVSGNATRPMGLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGA 739
++ T GG+SG + + + V + + PI+G+GG+ S A+ I+AGA
Sbjct: 296 ------RVET-GGLSGQPLKELSTQTVREMYTLTQGKLPIVGVGGVASGQDAMDKIRAGA 348
Query: 740 HAVQICSAVQNQDFTVVDDYITGLQTLL 767
VQ+ +A+ Q VV+ L LL
Sbjct: 349 SLVQLYTALVYQGPPVVNKIKRELDDLL 376
Score = 62 (26.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 344 DLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSP 403
D + V + G KF NP G+A+ + V + G+GF T + K N P
Sbjct: 73 DPTSLEVHVMGRKFQNPVGMAAGFDKHGEA-VDGLYRLGFGFVEVGTVT-PKPQDGNPKP 130
Query: 404 RIVK 407
R+ +
Sbjct: 131 RVFR 134
>TIGR_CMR|DET_0123 [details] [associations]
symbol:DET_0123 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008152 "metabolic process" evidence=ISS]
[GO:0015036 "disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR001450 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0046872 GO:GO:0016491 GO:GO:0051539 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0493 Gene3D:1.10.1060.10
SUPFAM:SSF46548 RefSeq:YP_180873.1 ProteinModelPortal:Q3ZA76
STRING:Q3ZA76 GeneID:3230519 KEGG:det:DET0123 PATRIC:21607333
HOGENOM:HOG000275479 OMA:HEATIFE ProtClustDB:CLSK837616
BioCyc:DETH243164:GJNF-123-MONOMER Uniprot:Q3ZA76
Length = 643
Score = 166 (63.5 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 67/288 (23%), Positives = 128/288 (44%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIG---IGKPN 100
IP+++LP D +N E++ + DLGV I + + ++ L K GY ++ + +G
Sbjct: 248 IPEHQLPKDILNKEIKAITDLGVTIHTSCQVQS----VQTLLKQGYDSVLLSTGVLGLDE 303
Query: 101 ANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAF 160
++P + T E FL + + L V+++G G A+
Sbjct: 304 GLLLPCDE--TVESDLMQGSDFLKNIKSSTKES------------LGDKVVIIGGGSEAY 349
Query: 161 DCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNKIAG 220
+ A +A G ++V +V + + A PEEV A + P + ++ D KI G
Sbjct: 350 NSAFAAKSLGVSEVHLVCSRHAGSKEASPEEVDRAIDAGVTVHPSLDFAKLVRLDGKIEG 409
Query: 221 MQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVN 280
++ R + D+E ++ + II+ + + V+ + P +K P +
Sbjct: 410 VELFRIRS-----YGYDKENKLHYE---IINDTRRFIAADTVITTVTPN--EK---PGAD 456
Query: 281 YTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNL 328
Y ++ PGVF GD + + + +E++ G++ A I KY+ + NL
Sbjct: 457 YLSVVQ--PGVFAAGDGISGARSVIEAMAAGRSVAGLIDKYLGGEGNL 502
Score = 42 (19.8 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 518 INDDMCINCGKCYMAC 533
++ C CG+C AC
Sbjct: 572 LDTSSCTYCGRCVDAC 587
>POMBASE|SPAC57A10.12c [details] [associations]
symbol:ura3 "dihydroorotate dehydrogenase Ura3"
species:4896 "Schizosaccharomyces pombe" [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0006207 "'de novo' pyrimidine
nucleobase biosynthetic process" evidence=IDA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0052888 "dihydroorotate oxidase
(fumarate) activity" evidence=IDA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PROSITE:PS00911 PROSITE:PS00912 UniPathway:UPA00070
PomBase:SPAC57A10.12c GO:GO:0016021 GO:GO:0005739 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:3.20.20.70 GO:GO:0005743
GO:GO:0044205 GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167 KO:K00226
GO:GO:0052888 HOGENOM:HOG000225103 OMA:ALNRMGF TIGRFAMs:TIGR01036
EMBL:X65114 PIR:A46248 RefSeq:NP_593317.1 ProteinModelPortal:P32747
STRING:P32747 PRIDE:P32747 EnsemblFungi:SPAC57A10.12c.1
GeneID:2542781 KEGG:spo:SPAC57A10.12c OrthoDB:EOG4NS6M1
NextBio:20803825 GO:GO:1901004 Uniprot:P32747
Length = 443
Score = 148 (57.2 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 50/176 (28%), Positives = 84/176 (47%)
Query: 577 DDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVR-SSVKIPF 635
+D++E +T AD L +N+S P+ G R + + +S + +S P
Sbjct: 245 EDYVE-GVRTFGNFADILVINVSSPNTPGLRNLQKKSALSTLLTAVVSERNKLNSPHPPV 303
Query: 636 FVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
VK+ P++ +TDIA + K DGV NT P T + GG
Sbjct: 304 LVKIAPDLNEEELTDIADVLKKCKIDGVIVGNTTVQ--------RPKTLKSTSHVEETGG 355
Query: 694 VSGNATRPMGLKAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
+SG +P+ L + ++ K + + PI+G GGI S A+++ +AGA VQ+ +A+
Sbjct: 356 LSGPPLKPIALNTLRTLRKHLSSDIPIIGCGGISSGKDAIEYARAGATMVQVYTAL 411
Score = 54 (24.1 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQ-KDMVTNVSPR 404
++VE+ G KF NP GLA+ A ++ N +GF+ + S+ K N PR
Sbjct: 105 LAVEVWGKKFCNPIGLAAGFDKQADAI--SGLLN-FGFSYLEIGSVTPKPQPGNPKPR 159
>UNIPROTKB|Q9KT87 [details] [associations]
symbol:rnfB "Electron transport complex protein RnfB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=ISS] HAMAP:MF_00463 InterPro:IPR007202 InterPro:IPR010207
InterPro:IPR012285 InterPro:IPR016463 InterPro:IPR017896
Pfam:PF04060 Pfam:PF13237 PIRSF:PIRSF005784 PROSITE:PS51379
PROSITE:PS51656 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886
GO:GO:0005737 GO:GO:0009055 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051539 GO:GO:0022900 GO:GO:0051537
Gene3D:1.10.1060.10 GO:GO:0016651 eggNOG:COG2878 KO:K03616
OMA:NGEMINK ProtClustDB:PRK05113 TIGRFAMs:TIGR01944 PIR:F82252
RefSeq:NP_230662.1 ProteinModelPortal:Q9KT87 DNASU:2614287
GeneID:2614287 KEGG:vch:VC1016 PATRIC:20081132 Uniprot:Q9KT87
Length = 195
Score = 138 (53.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 487 TILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE 546
TI + D++G VQ + +LDNK ++VA I++DMCI C KC AC AI +
Sbjct: 80 TIEKLADLMGVEVQDSAH--DLDNKVKMVAFIHEDMCIGCTKCIQACP---VDAIVGGNK 134
Query: 547 THQAHVTDECTGCTLCLS 564
+ +ECTGC LC++
Sbjct: 135 AVHTVIKNECTGCDLCVA 152
>TIGR_CMR|VC_1016 [details] [associations]
symbol:VC_1016 "RnfB-related protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0016651 "oxidoreductase activity,
acting on NAD(P)H" evidence=ISS] HAMAP:MF_00463 InterPro:IPR007202
InterPro:IPR010207 InterPro:IPR012285 InterPro:IPR016463
InterPro:IPR017896 Pfam:PF04060 Pfam:PF13237 PIRSF:PIRSF005784
PROSITE:PS51379 PROSITE:PS51656 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005886 GO:GO:0005737 GO:GO:0009055 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051539 GO:GO:0022900
GO:GO:0051537 Gene3D:1.10.1060.10 GO:GO:0016651 eggNOG:COG2878
KO:K03616 OMA:NGEMINK ProtClustDB:PRK05113 TIGRFAMs:TIGR01944
PIR:F82252 RefSeq:NP_230662.1 ProteinModelPortal:Q9KT87
DNASU:2614287 GeneID:2614287 KEGG:vch:VC1016 PATRIC:20081132
Uniprot:Q9KT87
Length = 195
Score = 138 (53.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 487 TILSVKDVIGQAVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITFHPE 546
TI + D++G VQ + +LDNK ++VA I++DMCI C KC AC AI +
Sbjct: 80 TIEKLADLMGVEVQDSAH--DLDNKVKMVAFIHEDMCIGCTKCIQACP---VDAIVGGNK 134
Query: 547 THQAHVTDECTGCTLCLS 564
+ +ECTGC LC++
Sbjct: 135 AVHTVIKNECTGCDLCVA 152
>TIGR_CMR|SPO_3770 [details] [associations]
symbol:SPO_3770 "glutamate synthase, small subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_168965.1 ProteinModelPortal:Q5LLZ4 GeneID:3196508
KEGG:sil:SPO3770 PATRIC:23381037 OMA:EFRIPIY Uniprot:Q5LLZ4
Length = 477
Score = 151 (58.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 45/171 (26%), Positives = 78/171 (45%)
Query: 150 VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPV 209
V+V+G GDTA DC +A+R GA V +R+ N+ E Q A EE F ++S
Sbjct: 292 VVVIGGGDTAMDCVRTAIRQGAVSVKCFYRRDRANMPGSQRETQNAEEEGVVF-EWLSAP 350
Query: 210 QVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIK-----LKANYIISAFGSTLLDNDVLE 264
+ D+K+AG+ + + + I+ +A+ +I A G D L
Sbjct: 351 KGFTGDDKVAGVMVQKMRLGQPDASGRQSPEVIEGADYVEEADLVIKALGFEPEDLPTLF 410
Query: 265 AIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAA 315
+ + ++G + + T AT + G++ GD + V ++ DG+ A
Sbjct: 411 GQPDLPVTRWGTVKAAFRTGATEMEGIYAVGDIVRGASLVVWAIRDGRDCA 461
>TIGR_CMR|CJE_0895 [details] [associations]
symbol:CJE_0895 "dihydroorotate dehydrogenase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 GO:GO:0016020 Gene3D:3.20.20.70
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044205 GO:GO:0006207
GO:GO:0004158 eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225103
OMA:ALNRMGF TIGRFAMs:TIGR01036 ProtClustDB:PRK05286
RefSeq:YP_178897.1 ProteinModelPortal:Q5HUY8 STRING:Q5HUY8
GeneID:3231408 KEGG:cjr:CJE0895 PATRIC:20043557
BioCyc:CJEJ195099:GJC0-915-MONOMER Uniprot:Q5HUY8
Length = 352
Score = 109 (43.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 592 DALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPN--ITNITDI 649
D +N+S P+ R + Q+ + + + + P +K+ P+ I + ++
Sbjct: 174 DYFIVNISSPNTKNLREL-----QNDDFLNTLLEEAKKITSKPILIKIAPDMKIDDALNL 228
Query: 650 AKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNA-TRPMGLKAVS 708
+ A + ADG NT S SL D N T+GG+SG T G+
Sbjct: 229 CENAIKKGADGFILANT-SVDYSL-LDNN----------RTFGGISGRLITEKSGI-FFK 275
Query: 709 SIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
+AK +F ++ GGIDSAD+A + I+ GA+ VQ+ +A+
Sbjct: 276 EVAKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTAL 316
Score = 86 (35.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 27/94 (28%), Positives = 41/94 (43%)
Query: 317 HIHKYIQEKNNLTVPDKPCLPKFMSHIDLVD---ISVEICGLKFPNPFGLASAPPTTASS 373
H+H ++ P F++H +VD + + GL F NP GLA A+
Sbjct: 17 HVHTLVEYSLRALSASFPGSLSFLAHKYIVDDESLRQNLLGLDFNNPVGLAGGFDKNAT- 75
Query: 374 MVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
M+R G+GF TF+ K N PR+ +
Sbjct: 76 MIRPLSALGFGFLEVGTFT-PKPQEGNEKPRLFR 108
>TIGR_CMR|SO_0988 [details] [associations]
symbol:SO_0988 "formate dehydrogenase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR001041 InterPro:IPR001327
InterPro:IPR001450 InterPro:IPR006478 InterPro:IPR006656
InterPro:IPR006657 InterPro:IPR006963 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 Pfam:PF00384 Pfam:PF01568
Pfam:PF04879 Pfam:PF12838 PROSITE:PS51085 PROSITE:PS51379
SMART:SM00926 InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198
Gene3D:3.40.50.720 GO:GO:0009055 GO:GO:0050660 GO:GO:0051536
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0030151 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0015942 GO:GO:0008863 GO:GO:0009326 HOGENOM:HOG000031440
KO:K00123 TIGRFAMs:TIGR01591 HSSP:P07658 RefSeq:NP_716617.1
ProteinModelPortal:Q8EI61 GeneID:1168830 KEGG:son:SO_0988
PATRIC:23521625 OMA:MTNDIPS ProtClustDB:CLSK906042 Uniprot:Q8EI61
Length = 1428
Score = 139 (54.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 72/290 (24%), Positives = 123/290 (42%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP+YRLP ++ E+EL+ G+ I + L +I + +L D + A+ + IG A
Sbjct: 249 IPEYRLPKAILDKEIELLCRNGLTIHTQMRLG-HEIHLNQLITD-FDAVCLAIGAQKA-- 304
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCA 163
+P+ +E G Y FL L V V+G G+TA DCA
Sbjct: 305 VPMHYKGSELAGCYLGVDFLKDHCLDKQLK------------LGKKVAVIGGGNTAIDCA 352
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVK-DNKIAGMQ 222
+A+R G + V +++R+ + A EV A E +F +P++ D ++ +
Sbjct: 353 RTAVREGCD-VTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPLENHSDADGRVQSVT 411
Query: 223 FNRT---EQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIK------PVKLDK 273
F++ E + G + +A + A S D ++ K + L +
Sbjct: 412 FSKMTLGEADASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPKGQLSHGELALSR 471
Query: 274 YGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQ 323
+ TM++ V +F GD T V ++ DG+ AA I K +Q
Sbjct: 472 WNTLMGCEQTMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAKAIDKMLQ 521
Score = 70 (29.7 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 505 YTELDNKKQVVALINDDMCINCGKCYMACND-SGYQAITFHPETHQ 549
Y +D + + + CI+CGKC C SG+ AI F +++Q
Sbjct: 634 YFSVDKSSPFIQF-DANRCISCGKCVDVCQQQSGHCAIQFAKDSYQ 678
Score = 61 (26.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 516 ALINDDMCINCGKCYMACNDSGYQAITFHPETHQAHVTDECTGCTLC 562
A + D C+ CG C C +G A+ + Q T+ T T+C
Sbjct: 699 ASMADSHCVQCGNCVQVC-PTG--ALVDARDKRQGDCTELTTASTIC 742
Score = 39 (18.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 498 AVQRVTNYTELDNKKQVVALINDDM-CINC 526
A+QR+ NY+E++ A + + C+ C
Sbjct: 574 ALQRLLNYSEVELGFPADAAMQEAARCLEC 603
>UNIPROTKB|P96219 [details] [associations]
symbol:gltD "Glutamate synthase [NADPH] small chain"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
UniPathway:UPA00634 InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0046872 EMBL:BX842584 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 GO:GO:0097054 TIGRFAMs:TIGR01317
KO:K00266 ProtClustDB:PRK12810 PIR:G70655 RefSeq:NP_218375.1
RefSeq:NP_338527.1 RefSeq:YP_006517358.1 HSSP:Q39243
ProteinModelPortal:P96219 SMR:P96219 PRIDE:P96219
EnsemblBacteria:EBMYCT00000002545 EnsemblBacteria:EBMYCT00000069396
GeneID:13317485 GeneID:886196 GeneID:922550 KEGG:mtc:MT3973
KEGG:mtu:Rv3858c KEGG:mtv:RVBD_3858c PATRIC:18130493
TubercuList:Rv3858c HOGENOM:HOG000031443 OMA:QIMPKEP Uniprot:P96219
Length = 488
Score = 149 (57.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 74/304 (24%), Positives = 130/304 (42%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP++++ ++ ++ ++ G + ++ DI+ EKLR D + A+ + G
Sbjct: 187 IPEFKMEKRHLDRRLDQMRSEGTEFRPGVNVGV-DISAEKLRAD-FDAVVLAGGATAWRE 244
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPIL-KGT-VIVLGAGDTAFD 161
+PI G E G + + FLP A PI KG V+++G GDT D
Sbjct: 245 LPI-PGRELE-GVHQAMEFLPW-ANRVQEGDDVLDEDGQPPITAKGKKVVIIGGGDTGAD 301
Query: 162 CATSALRCGA---NKVLVVFRKGCTNIRAVP-------EEVQLAWEEKCEFLPFMSPVQV 211
C + R GA ++ ++ R + P V A EE E + F +
Sbjct: 302 CLGTVHRQGAIAVHQFEIMPRPPDARAESTPWPTYPLMYRVSAAHEEGGERV-FSVNTEA 360
Query: 212 DV-KDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDNDVLEAIKPVK 270
V D +++ ++ + + G++V+ E +L+A+ ++ A G + L VK
Sbjct: 361 FVGTDGRVSALRAHEVTMLD-GKFVKVEGSDFELEADLVLLAMGFVGPERAGLLTDLGVK 419
Query: 271 LDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQEKNNLTV 330
+ G TSVPGVF GD V ++ +G+ AA + +Y+ + L
Sbjct: 420 FTERGNV-ARGDDFDTSVPGVFVAGDMGRGQSLIVWAIAEGRAAAAAVDRYLMGSSALPA 478
Query: 331 PDKP 334
P KP
Sbjct: 479 PVKP 482
>UNIPROTKB|P65908 [details] [associations]
symbol:pyrD "Dihydroorotate dehydrogenase (quinone)"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_00225 InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005886 Gene3D:3.20.20.70 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842578
GO:GO:0044205 GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167 KO:K00226
HOGENOM:HOG000225103 OMA:ALNRMGF TIGRFAMs:TIGR01036
ProtClustDB:PRK05286 PIR:G70577 RefSeq:NP_216655.1
RefSeq:NP_336667.1 RefSeq:YP_006515557.1 ProteinModelPortal:P65908
SMR:P65908 PRIDE:P65908 EnsemblBacteria:EBMYCT00000000837
EnsemblBacteria:EBMYCT00000071854 GeneID:13316948 GeneID:887326
GeneID:924276 KEGG:mtc:MT2197 KEGG:mtu:Rv2139 KEGG:mtv:RVBD_2139
PATRIC:18126590 TubercuList:Rv2139 Uniprot:P65908
Length = 357
Score = 138 (53.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 50/159 (31%), Positives = 80/159 (50%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPFFVKLTPNITN--ITD 648
A L +N+S P+ G R + Q E +R I VR+ P VK+ P++++ + D
Sbjct: 170 ASYLVVNVSSPNTPGLRDL-----QAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDD 224
Query: 649 IAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKAVS 708
IA A E G+ A NT ++S DG P G +L GG+SG P+ +AV
Sbjct: 225 IADLAVELDLAGIVATNT-----TVSRDGLTTP--GVDRLGP-GGISGP---PLAQRAVQ 273
Query: 709 SIAKMFPN----FPILGIGGIDSADVALQFIQAGAHAVQ 743
+ +++ ++ +GGI++AD A + I AGA +Q
Sbjct: 274 VLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQ 312
Score = 53 (23.7 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 20/84 (23%), Positives = 38/84 (45%)
Query: 331 PDKPCLPKFMSHIDLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKT 390
P + L + + D V ++ + G++FP P GLA+ +++ G+G+A T
Sbjct: 33 PVRRLLRRLLGPTDPV-LASTVFGVRFPAPLGLAAGFDKDGTALSSWG-AMGFGYAEIGT 90
Query: 391 FSLQKDMVTNVSPRIVKGTTSRHL 414
+ N +PR+ + R L
Sbjct: 91 VTAHPQP-GNPAPRLFRLADDRAL 113
>TIGR_CMR|SPO_2907 [details] [associations]
symbol:SPO_2907 "dihydroorotate dehydrogenase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 GO:GO:0016020 Gene3D:3.20.20.70
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0044205 GO:GO:0006207
GO:GO:0004158 KO:K00226 HOGENOM:HOG000225103 OMA:ALNRMGF
TIGRFAMs:TIGR01036 ProtClustDB:PRK05286 RefSeq:YP_168115.1
ProteinModelPortal:Q5LPE1 GeneID:3195368 KEGG:sil:SPO2907
PATRIC:23379239 Uniprot:Q5LPE1
Length = 350
Score = 129 (50.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 633 IPFFVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTT 690
IP F+K+ P+++ I DIA A + D V A NT +LS +G + +
Sbjct: 203 IPVFLKIAPDLSKDEIADIAAVARDTGVDAVIATNT-----TLSREG-----LHSAHKDE 252
Query: 691 YGGVSGNATRPMGLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAVQ 749
GG+SG + ++ ++ + P++G+GGI +A+ A I+AGA AVQ +A+
Sbjct: 253 AGGLSGAPLFDKSTRVLARLSALTDGAIPLIGVGGISNAEQAYAKIRAGASAVQFYTAMV 312
Query: 750 NQDFTVVDDYITGLQTLL 767
+ + GL LL
Sbjct: 313 YGGLALAAEIARGLDALL 330
Score = 62 (26.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ + GL PNP GLA+ A ++ A G+GF + + + N PR+ +
Sbjct: 42 LRTRVAGLDLPNPVGLAAGFDKNAEALAPLA-RAGFGF-IEVGAATPRPQPGNPRPRLFR 99
Query: 408 GTTSR 412
T R
Sbjct: 100 LTEDR 104
>UNIPROTKB|Q5ZHY0 [details] [associations]
symbol:DHODH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=TAS] [GO:0006222 "UMP biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0055086 "nucleobase-containing small
molecule metabolic process" evidence=TAS] Reactome:REACT_115655
HAMAP:MF_00225 InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912 GO:GO:0005739
GO:GO:0016020 Gene3D:3.20.20.70 GO:GO:0006206 GO:GO:0006207
GO:GO:0006222 GO:GO:0004158 eggNOG:COG0167 HOGENOM:HOG000225103
KO:K00254 OMA:ALNRMGF TIGRFAMs:TIGR01036 CTD:1723
HOVERGEN:HBG006898 OrthoDB:EOG47WNNW GeneTree:ENSGT00500000044924
EMBL:AADN02054197 EMBL:AJ721004 IPI:IPI00578843
RefSeq:NP_001006131.1 UniGene:Gga.4705 SMR:Q5ZHY0 STRING:Q5ZHY0
Ensembl:ENSGALT00000001163 GeneID:415876 KEGG:gga:415876
InParanoid:Q5ZHY0 NextBio:20819416 Uniprot:Q5ZHY0
Length = 387
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 591 ADALELNLSCPHGMGERGM-GLACGQD--PEMVRNISLWVRSSVKIPFFVKLTPNIT--N 645
AD L +N+S P+ G R + G A +D +++ + + S K VK+ P++T +
Sbjct: 197 ADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLAERDM-LPSERKPAVLVKIAPDLTEQD 255
Query: 646 ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLK 705
DIA E DG+ NT + P T++L GG+SG R + +
Sbjct: 256 KQDIAGVVCEVGVDGLIVSNTTTS--------RPRGLQSTQRLEA-GGLSGKPLRELSTQ 306
Query: 706 AVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGLQ 764
V + + PI+G+GG+ S AL+ I+AGA VQ+ +A+ VV L+
Sbjct: 307 TVREMYALTQGRVPIIGVGGVSSGRDALEKIRAGASLVQMYTALVYHGPPVVRTVKRELE 366
Query: 765 TLL 767
LL
Sbjct: 367 ELL 369
Score = 64 (27.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 344 DLVDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSP 403
D + V + GL+F NP GLA+ + V + G+GF T + + N P
Sbjct: 66 DSPSLEVHVLGLRFRNPLGLAAGFDKHGEA-VDGLYRMGFGFVEVGTVT-PEPQEGNPKP 123
Query: 404 RIVK 407
R+ +
Sbjct: 124 RVFR 127
>MGI|MGI:1928378 [details] [associations]
symbol:Dhodh "dihydroorotate dehydrogenase" species:10090
"Mus musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=ISO]
[GO:0004158 "dihydroorotate oxidase activity" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=ISO]
[GO:0006221 "pyrimidine nucleotide biosynthetic process"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0008144 "drug binding" evidence=ISO] [GO:0010181 "FMN binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0048039 "ubiquinone binding"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0090140 "regulation of mitochondrial fission"
evidence=ISO] InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 MGI:MGI:1928378 GO:GO:0016021 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0005743 GO:GO:0043065 GO:GO:0044205
GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167 GO:GO:0090140
HOGENOM:HOG000225103 KO:K00254 OMA:ALNRMGF TIGRFAMs:TIGR01036
CTD:1723 HOVERGEN:HBG006898 GeneTree:ENSGT00500000044924
EMBL:AF029667 EMBL:BC019542 EMBL:BC027829 EMBL:BC045206
IPI:IPI00130733 RefSeq:NP_064430.1 UniGene:Mm.23894
ProteinModelPortal:O35435 SMR:O35435 IntAct:O35435 STRING:O35435
PhosphoSite:O35435 PaxDb:O35435 PRIDE:O35435
Ensembl:ENSMUST00000069058 Ensembl:ENSMUST00000123605 GeneID:56749
KEGG:mmu:56749 UCSC:uc009nip.1 InParanoid:O35435 BindingDB:O35435
ChEMBL:CHEMBL2991 NextBio:313274 Bgee:O35435 CleanEx:MM_DHODH
Genevestigator:O35435 GermOnline:ENSMUSG00000031730 Uniprot:O35435
Length = 395
Score = 136 (52.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 54/167 (32%), Positives = 84/167 (50%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS--LWVRSSVKIP----FFVKLTPNIT 644
AD L +N+S P+ G R + G+ E+ R +S L R ++K P VK+ P++T
Sbjct: 205 ADYLVVNVSSPNTAGLRSLQ---GKT-ELRRLLSKVLQERDALKGPQKPAVLVKIAPDLT 260
Query: 645 --NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702
+ DIA A E DG+ NT ++S P G + T GG+SG R +
Sbjct: 261 AQDKEDIASVARELGIDGLIITNT-----TVS---RPVGLQGALRSET-GGLSGKPLRDL 311
Query: 703 GLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
+ + + + PI+G+GG+ S AL+ IQAGA VQ+ +A+
Sbjct: 312 STQTIREMYALTQGTIPIIGVGGVSSGQDALEKIQAGASLVQLYTAL 358
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V + G KF NP G+A+ + V ++ G+GF + + Q N PR+ +
Sbjct: 78 LEVRVLGHKFRNPVGIAAGFDKHGEA-VDGLYKLGFGFVEVGSVTPQPQE-GNPRPRVFR 135
>TIGR_CMR|CPS_0762 [details] [associations]
symbol:CPS_0762 "glutamate synthase, NADH/NADPH, small
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 GO:GO:0016639 Gene3D:1.10.1060.10 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 RefSeq:YP_267511.1 ProteinModelPortal:Q488K3
STRING:Q488K3 GeneID:3520782 KEGG:cps:CPS_0762 PATRIC:21464835
OMA:WAEGWVK BioCyc:CPSY167879:GI48-848-MONOMER Uniprot:Q488K3
Length = 496
Score = 99 (39.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 32/142 (22%), Positives = 64/142 (45%)
Query: 190 EEVQLAWEEKCEFLPFMSPVQVDVKDNKIAGMQFNRT-EQNEKGEWVEDEEQRIK--LKA 246
E +++ ++ ++L ++ DV+ N A + T E+N+KG+ E + + A
Sbjct: 355 EAIEIQGQDPRQYLVMTKKIESDVQGNVKAVHTVDITWERNDKGQMFPQEVAGSEKAIPA 414
Query: 247 NYIISAFGSTLLDNDVLEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVE 306
+ ++ A G + ++E ++ D Y ATS GVF GD V
Sbjct: 415 DIVLIAMGFMGPEGGLVEQFG-LEQDNRSNIAAEYDKFATSKQGVFAAGDGRRGQSLIVW 473
Query: 307 SVNDGKTAAWHIHKYIQEKNNL 328
++++G+ A + Y+ K+ L
Sbjct: 474 AIDEGRRCAREVDSYLMGKSYL 495
Score = 94 (38.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 32/125 (25%), Positives = 55/125 (44%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP +L + V V+++ + G+ + +D+++EKL D + AI + IG
Sbjct: 196 IPNMKLQKELVQRRVDILAEEGIVFVTNTEVG-KDVSVEKLESD-FDAIVLCIGATVPRD 253
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCA 163
+P+ +G E G + + FL A V+V+G GDT DC
Sbjct: 254 LPV-EG-RELNGVHFAMDFLK--ANTKSLLDSEHKDGQYINAQGKNVVVIGGGDTGTDCI 309
Query: 164 TSALR 168
++LR
Sbjct: 310 GTSLR 314
>UNIPROTKB|Q74FU5 [details] [associations]
symbol:sfrB "NADPH oxidoreductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 137 (53.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 52/189 (27%), Positives = 90/189 (47%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP YR P + +++++ +GV I + + +DI++E+L K + A+F+ G +
Sbjct: 298 IPPYRQPRHLLQRDIDIISSMGVDIIYDTRIG-KDISLEEL-KQKFDAVFLAPGAHRSKP 355
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGT-VIVLGAGDTAFDC 162
+ + +G E+ G+ K FL P G V+V+G G+TA DC
Sbjct: 356 MGV-EG--EDKGY---KGFLK------GGIDFLREAYMGRPTGMGKKVVVVGGGNTAIDC 403
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK-IAGM 221
ALR GA + +++R+ + A EV A EE F + P +V V +N+ + G+
Sbjct: 404 VRVALREGAEESTLLYRRSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGV 463
Query: 222 QFNRTEQNE 230
+ R E
Sbjct: 464 ECVRMALGE 472
Score = 57 (25.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 267 KPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE-K 325
K +K D G P + T + GVF GGD T V + + AA I ++++E K
Sbjct: 536 KDLK-DGMGNPLAR--VLITDLEGVFAGGDAEIGPLTVVACIGNAHRAARVIQRWLEEGK 592
Query: 326 NNLT 329
LT
Sbjct: 593 AYLT 596
>TIGR_CMR|GSU_0510 [details] [associations]
symbol:GSU_0510 "Fe(III) reductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 137 (53.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 52/189 (27%), Positives = 90/189 (47%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP YR P + +++++ +GV I + + +DI++E+L K + A+F+ G +
Sbjct: 298 IPPYRQPRHLLQRDIDIISSMGVDIIYDTRIG-KDISLEEL-KQKFDAVFLAPGAHRSKP 355
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGT-VIVLGAGDTAFDC 162
+ + +G E+ G+ K FL P G V+V+G G+TA DC
Sbjct: 356 MGV-EG--EDKGY---KGFLK------GGIDFLREAYMGRPTGMGKKVVVVGGGNTAIDC 403
Query: 163 ATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPVQVDVKDNK-IAGM 221
ALR GA + +++R+ + A EV A EE F + P +V V +N+ + G+
Sbjct: 404 VRVALREGAEESTLLYRRSRKEMPADVWEVDGADEEGVRFEFQVLPTRVLVDENEQVTGV 463
Query: 222 QFNRTEQNE 230
+ R E
Sbjct: 464 ECVRMALGE 472
Score = 57 (25.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 267 KPVKLDKYGYPEVNYTTMATSVPGVFCGGDTANLSDTTVESVNDGKTAAWHIHKYIQE-K 325
K +K D G P + T + GVF GGD T V + + AA I ++++E K
Sbjct: 536 KDLK-DGMGNPLAR--VLITDLEGVFAGGDAEIGPLTVVACIGNAHRAARVIQRWLEEGK 592
Query: 326 NNLT 329
LT
Sbjct: 593 AYLT 596
>TIGR_CMR|CBU_0971 [details] [associations]
symbol:CBU_0971 "dihydroorotate dehydrogenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00225 InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005886 Gene3D:3.20.20.70 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225103 OMA:ALNRMGF
TIGRFAMs:TIGR01036 RefSeq:NP_819979.1 ProteinModelPortal:Q83CY0
GeneID:1208866 KEGG:cbu:CBU_0971 PATRIC:17930667
ProtClustDB:PRK05286 BioCyc:CBUR227377:GJ7S-964-MONOMER
Uniprot:Q83CY0
Length = 347
Score = 125 (49.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 632 KIPFFVKLTPNIT--NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689
++P F+K+ P++T I IA A + + +G+ A NT S S G T+KL
Sbjct: 211 RVPLFLKIAPDLTPEEIQTIATLALQHRIEGIVATNT-----SCSRQG-------TEKLP 258
Query: 690 TY---GGVSGNATRPMGLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQI 744
GG+SG PM L+ V + + PI+ +GGI S + A I AGA VQ+
Sbjct: 259 NANEAGGLSGKPLFPMTLQVVKQLHSFLGDEIPIVAVGGIFSGENAQTLINAGARLVQL 317
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/80 (26%), Positives = 34/80 (42%)
Query: 352 ICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVKGTTS 411
+ G++FPNP GLA+ M G+GF + K N PRI + +
Sbjct: 49 VFGIEFPNPVGLAAGLDKNGEYM-DELLGLGFGFIEVGAVT-PKPQPGNSKPRIFRLPQA 106
Query: 412 RHLYGPEQGSFLNIELISEK 431
R L + L ++ + E+
Sbjct: 107 RALINRMGFNNLGVDYLVEQ 126
Score = 40 (19.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 305 VESVNDGKTAAWHIHKYIQEKNNLTVPDKPCLPKFMSHIDLVDISV 350
+ VN GK + K ++ N C K S++D V I++
Sbjct: 135 IVGVNIGKNLTTPLEKAHEDYQN-------CFEKLYSYVDYVTINI 173
>SGD|S000001699 [details] [associations]
symbol:URA1 "Dihydroorotate dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0019898 "extrinsic to membrane"
evidence=IDA] [GO:0004152 "dihydroorotate dehydrogenase activity"
evidence=IEA;IMP;IDA] [GO:0044205 "'de novo' UMP biosynthetic
process" evidence=IEA] [GO:0052888 "dihydroorotate oxidase
(fumarate) activity" evidence=IEA] [GO:0006221 "pyrimidine
nucleotide biosynthetic process" evidence=IEA] [GO:0006207 "'de
novo' pyrimidine nucleobase biosynthetic process" evidence=IEA;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR001295 InterPro:IPR005720
InterPro:IPR012135 InterPro:IPR013785 InterPro:IPR024920
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 SGD:S000001699 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0019898 EMBL:BK006944 GO:GO:0044205 GO:GO:0006207 EMBL:X75951
GO:GO:0004158 TIGRFAMs:TIGR01037 eggNOG:COG0167 GO:GO:0004152
EMBL:X59371 EMBL:M83295 HOGENOM:HOG000225104 KO:K00226
GO:GO:0052888 GeneTree:ENSGT00500000044924 EMBL:AJ585637
EMBL:AJ585638 EMBL:AJ585639 EMBL:AJ585640 EMBL:AJ585641
EMBL:AJ585642 EMBL:AJ585643 EMBL:AJ585644 EMBL:AJ585645
EMBL:AJ585646 EMBL:AJ585647 EMBL:AJ585648 EMBL:AJ585649
EMBL:AJ585650 EMBL:AJ585651 EMBL:Z28216 PIR:JC1276
RefSeq:NP_012706.1 ProteinModelPortal:P28272 SMR:P28272
DIP:DIP-6573N IntAct:P28272 MINT:MINT-709357 STRING:P28272
PaxDb:P28272 PeptideAtlas:P28272 EnsemblFungi:YKL216W GeneID:853664
KEGG:sce:YKL216W CYGD:YKL216w OMA:CIHPLAV OrthoDB:EOG43XZCD
BioCyc:MetaCyc:YKL216W-MONOMER SABIO-RK:P28272 BindingDB:P28272
ChEMBL:CHEMBL5621 NextBio:974596 Genevestigator:P28272
GermOnline:YKL216W Uniprot:P28272
Length = 314
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 50/209 (23%), Positives = 96/209 (45%)
Query: 577 DDWLELSKKTEKAGADAL-ELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSVKIPF 635
D+ L L +K + + + + ELNLSCP+ G+ + D ++ + V + K P
Sbjct: 109 DENLNLLRKIQDSEFNGITELNLSCPNVPGKPQVAY----DFDLTKETLEKVFAFFKKPL 164
Query: 636 FVKLTP--NITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGG 693
VKL P + + +AK E V++IN++ + + + +V K +GG
Sbjct: 165 GVKLPPYFDFAHFDIMAKILNEFPLAYVNSINSIGNGLFIDVEKE---SVVVKPKNGFGG 221
Query: 694 VSGNATRPMGLKAVSSI-AKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQD 752
+ G +P L V + ++ P ++G GGI S A + + GA +QI + +Q +
Sbjct: 222 IGGEYVKPTALANVRAFYTRLRPEIKVIGTGGIKSGKDAFEHLLCGASMLQIGTELQKEG 281
Query: 753 FTVVDDYITGLQTLLYLKS-TQLKGWDGQ 780
+ + L+ ++ K T + + G+
Sbjct: 282 VKIFERIEKELKDIMEAKGYTSIDQFRGK 310
>TIGR_CMR|NSE_0179 [details] [associations]
symbol:NSE_0179 "dihydroorotate dehydrogenase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
UniPathway:UPA00070 GO:GO:0016020 Gene3D:3.20.20.70 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0004158
eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225103 OMA:ALNRMGF
TIGRFAMs:TIGR01036 RefSeq:YP_506074.1 ProteinModelPortal:Q2GEM2
STRING:Q2GEM2 GeneID:3932024 KEGG:nse:NSE_0179 PATRIC:22680457
ProtClustDB:CLSK2527826 BioCyc:NSEN222891:GHFU-210-MONOMER
Uniprot:Q2GEM2
Length = 348
Score = 104 (41.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 41/175 (23%), Positives = 78/175 (44%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWVRSSV--KIPFFVKLTPNITNITD 648
AD + LN+S P+ + R M Q E++ + + V+++V + F+K+ P++ +
Sbjct: 165 ADYITLNISSPNTVSLRDM-----QKVEILEELLIAVKAAVGSNVRIFIKVAPDLAEGAE 219
Query: 649 IA--KAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLKA 706
+ A + K G+ NT G ++ +K YGG+SG P+ +
Sbjct: 220 VGIISLALKHKVAGIIVSNTTIGCRE---------SLHSKHKVEYGGLSGT---PLFKLS 267
Query: 707 VSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVD 757
+ KM+ +G GGI A+ A I+ GA +Q ++ F +++
Sbjct: 268 TGLLRKMYRCTNGELVFIGCGGISDAETAYAKIRNGAALIQAYTSFTYHGFGLLN 322
Score = 80 (33.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 26/75 (34%), Positives = 37/75 (49%)
Query: 337 PKFMSHIDLVDISVE--ICGLKFPNPFGLASAPPTTASSM--VRRAFENGWGFAVTKTFS 392
P F+S D +E +CGL F NP G+A+ A + +RR G+GF T +
Sbjct: 30 PGFVSQNSFEDPILESRVCGLHFKNPIGIAAGFDKNAECVTALRRV---GFGFIELGTVT 86
Query: 393 LQKDMVTNVSPRIVK 407
L K N SPR+ +
Sbjct: 87 L-KPQKGNPSPRLFR 100
>UNIPROTKB|P0A7E1 [details] [associations]
symbol:pyrD "dihydroorotate dehydrogenase, type 2"
species:83333 "Escherichia coli K-12" [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0044205 "'de novo' UMP biosynthetic
process" evidence=IEA] [GO:0010181 "FMN binding" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IEA;IMP] [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=IEA;IDA] [GO:0006221 "pyrimidine
nucleotide biosynthetic process" evidence=IEA] HAMAP:MF_00225
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 GO:GO:0005886 GO:GO:0016020
Gene3D:3.20.20.70 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0010181
GO:GO:0044205 GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167
GO:GO:0004152 KO:K00226 HOGENOM:HOG000225103 OMA:ALNRMGF
TIGRFAMs:TIGR01036 ProtClustDB:PRK05286 EMBL:X02826 PIR:A23109
RefSeq:NP_415465.1 RefSeq:YP_489217.1 PDB:1F76 PDBsum:1F76
ProteinModelPortal:P0A7E1 SMR:P0A7E1 DIP:DIP-35945N IntAct:P0A7E1
SWISS-2DPAGE:P0A7E1 PRIDE:P0A7E1 EnsemblBacteria:EBESCT00000005052
EnsemblBacteria:EBESCT00000014954 GeneID:12930446 GeneID:945556
KEGG:ecj:Y75_p0917 KEGG:eco:b0945 PATRIC:32117109 EchoBASE:EB0800
EcoGene:EG10807 BioCyc:EcoCyc:DIHYDROOROTOX-MONOMER
BioCyc:ECOL316407:JW0928-MONOMER
BioCyc:MetaCyc:DIHYDROOROTOX-MONOMER SABIO-RK:P0A7E1
EvolutionaryTrace:P0A7E1 Genevestigator:P0A7E1 Uniprot:P0A7E1
Length = 336
Score = 136 (52.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 57/181 (31%), Positives = 82/181 (45%)
Query: 576 KDDWLELSKKTEKAGADALELNLSCPHGMGERGM--GLACGQDPEMVRNIS--LWVRSSV 631
KDD+L +K A A + +N+S P+ G R + G A ++N L
Sbjct: 152 KDDYLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHK 210
Query: 632 KIPFFVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLT 689
+P VK+ P+++ + +A + DGV A NT SL G K
Sbjct: 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLD-RSL--------VQGMKNCD 261
Query: 690 TYGGVSGNATRPMGLKAVSSIAKMF----PNFPILGIGGIDSADVALQFIQAGAHAVQIC 745
GG+SG RP+ LK+ I ++ PI+G+GGIDS A + I AGA VQI
Sbjct: 262 QTGGLSG---RPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318
Query: 746 S 746
S
Sbjct: 319 S 319
Score = 44 (20.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 350 VEICGLKFPNPFGLAS 365
V GL F NP GLA+
Sbjct: 47 VNCMGLTFKNPLGLAA 62
>WB|WBGene00020932 [details] [associations]
symbol:dhod-1 species:6239 "Caenorhabditis elegans"
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
GO:GO:0016020 Gene3D:3.20.20.70 GO:GO:0006207 GO:GO:0006222
GO:GO:0004158 eggNOG:COG0167 EMBL:FO081084 HOGENOM:HOG000225103
KO:K00254 OMA:ALNRMGF TIGRFAMs:TIGR01036
GeneTree:ENSGT00500000044924 PIR:T15209 RefSeq:NP_491930.1
HSSP:Q02127 ProteinModelPortal:O01815 SMR:O01815 STRING:O01815
PaxDb:O01815 EnsemblMetazoa:W02D3.2 GeneID:172392
KEGG:cel:CELE_W02D3.2 UCSC:W02D3.2 CTD:172392 WormBase:W02D3.2
InParanoid:O01815 NextBio:875317 Uniprot:O01815
Length = 411
Score = 122 (48.0 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 50/172 (29%), Positives = 79/172 (45%)
Query: 592 DALELNLSCPHGMGERGMGLACGQDPEMVR-NISLWVRSSVKIP-FFVKLTPNI--TNIT 647
D L LN+S P+ G R M + + + +L + K P F+K+ P++ + +
Sbjct: 217 DYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVHQALEMHKLEKQPQVFLKIAPDLIESELK 276
Query: 648 DIAKAAYEGK--ADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLK 705
DIA+ K DG+ NT P + ++ T GG+SG R + +
Sbjct: 277 DIAQVVTNKKFAIDGIIVSNTTIA--------RP-DYLRSENKTETGGLSGAPVREISTE 327
Query: 706 AVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVV 756
V I K+ PI+G GG+ S A + I+AGA VQ+ SA + F V+
Sbjct: 328 CVRKIYKLTNGQIPIIGCGGVFSGADAYEKIRAGASLVQLYSAFVYEGFPVI 379
Score = 62 (26.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 318 IHKYIQEKNN----LTVPDKPCLPKF-MSHIDLVDISVEICGLKFPNPFGLASAPPTTAS 372
+HK++ +++ + LP+F + + ++ E+ G +F NP GLA+
Sbjct: 55 VHKFVDGEDSHRWAVRAASWGLLPRFGWNRKEYPELKCELFGREFKNPIGLAAGFDKDGQ 114
Query: 373 SMVRRAFENGWG 384
++ + A +G+G
Sbjct: 115 AITQLAKNSGFG 126
>CGD|CAL0005359 [details] [associations]
symbol:URA1 species:5476 "Candida albicans" [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=ISS;IDA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IC;NAS] [GO:0031304 "intrinsic to mitochondrial inner
membrane" evidence=NAS] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0019898 "extrinsic to membrane"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 CGD:CAL0005359 GO:GO:0016021
Gene3D:3.20.20.70 EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044205
GO:GO:0006207 GO:GO:0031304 GO:GO:0004158 eggNOG:COG0167
GO:GO:0004152 KO:K00226 BRENDA:1.3.99.11 TIGRFAMs:TIGR01036
EMBL:AY230865 EMBL:AY240959 RefSeq:XP_723332.1 RefSeq:XP_723522.1
ProteinModelPortal:Q874I4 STRING:Q874I4 GeneID:3634819
GeneID:3634949 KEGG:cal:CaO19.12299 KEGG:cal:CaO19.4836
SABIO-RK:Q874I4 Uniprot:Q874I4
Length = 444
Score = 138 (53.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/182 (26%), Positives = 89/182 (48%)
Query: 577 DDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQD---PEMVRNISLWVRSSV 631
D+ + K E+ G AD L +N+S P+ G R + +V+ ++ ++ +
Sbjct: 232 DEVNDYVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLTTVVKERNVLGKNLL 291
Query: 632 --KIPFFVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
K P VK+ P++T I IA +A E K DG+ NT ++ + +
Sbjct: 292 GNKPPVLVKVAPDLTEPEIESIANSAKEAKVDGIIISNT-----TIQRPVDRLLTTDKQL 346
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPN--FPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG +P+ LKA+ ++ K + ++G GGI + AL+F +AGA +++
Sbjct: 347 INQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFIELY 406
Query: 746 SA 747
+A
Sbjct: 407 TA 408
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/90 (22%), Positives = 35/90 (38%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR--- 404
+ V++ G K NP GLA+ + + F G+ + + + + N PR
Sbjct: 107 LGVQVFGHKLKNPIGLAAGLDKDGEA-IESLFNCGFSYVEIGSIT-PEPQPGNPQPRFFR 164
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAF 434
+ K + YG N+ L + K F
Sbjct: 165 LPKDDAVINRYGFNSSGHFNV-LATLKLRF 193
>UNIPROTKB|Q874I4 [details] [associations]
symbol:URA9 "Dihydroorotate dehydrogenase (quinone),
mitochondrial" species:237561 "Candida albicans SC5314" [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=ISS;IDA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IC;NAS] [GO:0031304 "intrinsic to mitochondrial inner
membrane" evidence=NAS] InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 CGD:CAL0005359 GO:GO:0016021
Gene3D:3.20.20.70 EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044205
GO:GO:0006207 GO:GO:0031304 GO:GO:0004158 eggNOG:COG0167
GO:GO:0004152 KO:K00226 BRENDA:1.3.99.11 TIGRFAMs:TIGR01036
EMBL:AY230865 EMBL:AY240959 RefSeq:XP_723332.1 RefSeq:XP_723522.1
ProteinModelPortal:Q874I4 STRING:Q874I4 GeneID:3634819
GeneID:3634949 KEGG:cal:CaO19.12299 KEGG:cal:CaO19.4836
SABIO-RK:Q874I4 Uniprot:Q874I4
Length = 444
Score = 138 (53.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/182 (26%), Positives = 89/182 (48%)
Query: 577 DDWLELSKKTEKAG--ADALELNLSCPHGMGERGMGLACGQD---PEMVRNISLWVRSSV 631
D+ + K E+ G AD L +N+S P+ G R + +V+ ++ ++ +
Sbjct: 232 DEVNDYVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLTTVVKERNVLGKNLL 291
Query: 632 --KIPFFVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
K P VK+ P++T I IA +A E K DG+ NT ++ + +
Sbjct: 292 GNKPPVLVKVAPDLTEPEIESIANSAKEAKVDGIIISNT-----TIQRPVDRLLTTDKQL 346
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPN--FPILGIGGIDSADVALQFIQAGAHAVQIC 745
+ GG+SG +P+ LKA+ ++ K + ++G GGI + AL+F +AGA +++
Sbjct: 347 INQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFIELY 406
Query: 746 SA 747
+A
Sbjct: 407 TA 408
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/90 (22%), Positives = 35/90 (38%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPR--- 404
+ V++ G K NP GLA+ + + F G+ + + + + N PR
Sbjct: 107 LGVQVFGHKLKNPIGLAAGLDKDGEA-IESLFNCGFSYVEIGSIT-PEPQPGNPQPRFFR 164
Query: 405 IVKGTTSRHLYGPEQGSFLNIELISEKTAF 434
+ K + YG N+ L + K F
Sbjct: 165 LPKDDAVINRYGFNSSGHFNV-LATLKLRF 193
>RGD|68352 [details] [associations]
symbol:Dhodh "dihydroorotate dehydrogenase (quinone)"
species:10116 "Rattus norvegicus" [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=NAS;IDA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IEA;IDA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007595 "lactation" evidence=IEP] [GO:0008144
"drug binding" evidence=IPI] [GO:0010181 "FMN binding" evidence=IDA]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031000 "response to caffeine"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042594 "response to starvation" evidence=IEP] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0044205 "'de novo' UMP
biosynthetic process" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=IDA] [GO:0090140 "regulation of mitochondrial fission"
evidence=IMP] InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164
PROSITE:PS00911 PROSITE:PS00912 UniPathway:UPA00070 RGD:68352
GO:GO:0016021 Gene3D:3.20.20.70 GO:GO:0005743 GO:GO:0042493
GO:GO:0008144 GO:GO:0043025 GO:GO:0007565 GO:GO:0031000
GO:GO:0042594 GO:GO:0043065 GO:GO:0007595 GO:GO:0010181
GO:GO:0044205 GO:GO:0006207 GO:GO:0048039 GO:GO:0004158
eggNOG:COG0167 GO:GO:0090140 HOGENOM:HOG000225103 KO:K00254
TIGRFAMs:TIGR01036 CTD:1723 HOVERGEN:HBG006898
GeneTree:ENSGT00500000044924 EMBL:X80778 IPI:IPI00948466 PIR:A59277
RefSeq:NP_001008553.1 UniGene:Rn.81502 PDB:1UUM PDB:1UUO PDBsum:1UUM
PDBsum:1UUO ProteinModelPortal:Q63707 SMR:Q63707 STRING:Q63707
PRIDE:Q63707 Ensembl:ENSRNOT00000066733 GeneID:65156 KEGG:rno:65156
UCSC:RGD:68352 InParanoid:Q63707 SABIO-RK:Q63707 BindingDB:Q63707
ChEMBL:CHEMBL2383 EvolutionaryTrace:Q63707 NextBio:614005
ArrayExpress:Q63707 Genevestigator:Q63707
GermOnline:ENSRNOG00000015063 Uniprot:Q63707
Length = 395
Score = 126 (49.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 53/167 (31%), Positives = 83/167 (49%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS--LWVRSSVK---IP-FFVKLTPNIT 644
AD L +N+S P+ G R + G+ E+ +S L R ++K P VK+ P++T
Sbjct: 205 ADYLVVNVSSPNTAGLRSLQ---GKT-ELRHLLSKVLQERDALKGTRKPAVLVKIAPDLT 260
Query: 645 --NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702
+ DIA A E DG+ NT ++S P G + T GG+SG R +
Sbjct: 261 AQDKEDIASVARELGIDGLIVTNT-----TVS---RPVGLQGALRSET-GGLSGKPLRDL 311
Query: 703 GLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
+ + + + PI+G+GG+ S AL+ IQAGA VQ+ +A+
Sbjct: 312 STQTIREMYALTQGRIPIIGVGGVSSGQDALEKIQAGASLVQLYTAL 358
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V++ G KF NP G+A+ + V ++ G+GF + + Q N PR+ +
Sbjct: 78 LEVKVLGHKFRNPVGIAAGFDKNGEA-VDGLYKLGFGFVEVGSVTPQPQE-GNPRPRVFR 135
>UNIPROTKB|Q9KRZ2 [details] [associations]
symbol:pyrD "Dihydroorotate dehydrogenase (quinone)"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004158 "dihydroorotate oxidase activity" evidence=ISS]
[GO:0009220 "pyrimidine ribonucleotide biosynthetic process"
evidence=ISS] HAMAP:MF_00225 InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0005886 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0044205 GO:GO:0006207 GO:GO:0009220
GO:GO:0004158 eggNOG:COG0167 KO:K00226 OMA:ALNRMGF
TIGRFAMs:TIGR01036 ProtClustDB:PRK05286 PIR:D82193
RefSeq:NP_231132.1 ProteinModelPortal:Q9KRZ2 SMR:Q9KRZ2
DNASU:2613997 GeneID:2613997 KEGG:vch:VC1491 PATRIC:20082038
Uniprot:Q9KRZ2
Length = 336
Score = 123 (48.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 48/180 (26%), Positives = 78/180 (43%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMV----RNISLWVRSSVKIPFFVKLTPNITN- 645
A + +N+S P+ G R + D + R L + +P +K+ P++++
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDD 225
Query: 646 -ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGL 704
I I ++ + K D V A NT SL G K GG+SG +
Sbjct: 226 EIQQICQSLLKNKIDSVIATNTTLD-RSL--------VEGMKFANEAGGLSGRPLQNRST 276
Query: 705 KAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763
+ + + K + PI+G+GGIDS A + + AGA VQ+ S Q +V D + L
Sbjct: 277 EVIKCLYKELGEEIPIIGVGGIDSYISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
Score = 54 (24.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 350 VEICGLKFPNPFGLASAPPTTASSMVRRAF-ENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
V+ GL F NP GLA+ + AF G+GF T + + N PR+ +
Sbjct: 47 VQCMGLTFKNPVGLAAGLDKNGECI--EAFGAMGFGFVEVGTVT-PRPQAGNDKPRLFR 102
>TIGR_CMR|VC_1491 [details] [associations]
symbol:VC_1491 "dihydroorotate dehydrogenase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004158 "dihydroorotate
oxidase activity" evidence=ISS] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=ISS] HAMAP:MF_00225
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 GO:GO:0005886 Gene3D:3.20.20.70
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044205 GO:GO:0006207
GO:GO:0009220 GO:GO:0004158 eggNOG:COG0167 KO:K00226 OMA:ALNRMGF
TIGRFAMs:TIGR01036 ProtClustDB:PRK05286 PIR:D82193
RefSeq:NP_231132.1 ProteinModelPortal:Q9KRZ2 SMR:Q9KRZ2
DNASU:2613997 GeneID:2613997 KEGG:vch:VC1491 PATRIC:20082038
Uniprot:Q9KRZ2
Length = 336
Score = 123 (48.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 48/180 (26%), Positives = 78/180 (43%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMV----RNISLWVRSSVKIPFFVKLTPNITN- 645
A + +N+S P+ G R + D + R L + +P +K+ P++++
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDD 225
Query: 646 -ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGL 704
I I ++ + K D V A NT SL G K GG+SG +
Sbjct: 226 EIQQICQSLLKNKIDSVIATNTTLD-RSL--------VEGMKFANEAGGLSGRPLQNRST 276
Query: 705 KAVSSIAK-MFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITGL 763
+ + + K + PI+G+GGIDS A + + AGA VQ+ S Q +V D + L
Sbjct: 277 EVIKCLYKELGEEIPIIGVGGIDSYISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
Score = 54 (24.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 350 VEICGLKFPNPFGLASAPPTTASSMVRRAF-ENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
V+ GL F NP GLA+ + AF G+GF T + + N PR+ +
Sbjct: 47 VQCMGLTFKNPVGLAAGLDKNGECI--EAFGAMGFGFVEVGTVT-PRPQAGNDKPRLFR 102
>TIGR_CMR|CHY_0746 [details] [associations]
symbol:CHY_0746 "putative thiamine-phosphate
pyrophosphorylase" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0004789 "thiamine-phosphate
diphosphorylase activity" evidence=ISS] [GO:0009228 "thiamine
biosynthetic process" evidence=ISS] HAMAP:MF_00097
InterPro:IPR003733 InterPro:IPR013785 InterPro:IPR016229
Pfam:PF02581 PIRSF:PIRSF000512 UniPathway:UPA00060
Gene3D:3.20.20.70 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0009228 GO:GO:0009229 eggNOG:COG0352 GO:GO:0004789
InterPro:IPR022998 SUPFAM:SSF51391 TIGRFAMs:TIGR00693 KO:K00788
RefSeq:YP_359600.1 ProteinModelPortal:Q3AE34 STRING:Q3AE34
GeneID:3727945 KEGG:chy:CHY_0746 PATRIC:21274626
HOGENOM:HOG000233097 OMA:EEWCRFG ProtClustDB:PRK02615
BioCyc:CHYD246194:GJCN-746-MONOMER Uniprot:Q3AE34
Length = 364
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 32/103 (31%), Positives = 56/103 (54%)
Query: 646 ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMGLK 705
+ ++A+ + GK G+SA N G++ + A G + +G T+ +A P G++
Sbjct: 245 LLEVARKHFPGKIIGLSATNYEEGVLGIKA-GADYLGLGPIFPTS---TKEDAAPPCGVE 300
Query: 706 AVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAV 748
+ + + FPN P++ IGGID V + I+AGA + + SAV
Sbjct: 301 VIQKLKEEFPNSPVIAIGGIDREKV-FEVIRAGADGIAVISAV 342
>UNIPROTKB|Q5E9W3 [details] [associations]
symbol:DHODH "Dihydroorotate dehydrogenase (quinone),
mitochondrial" species:9913 "Bos taurus" [GO:0044205 "'de novo' UMP
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IEA] [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0016021 Gene3D:3.20.20.70 GO:GO:0005743
GO:GO:0044205 GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167
HOGENOM:HOG000225103 KO:K00254 TIGRFAMs:TIGR01036 EMBL:BT020807
EMBL:BC120337 IPI:IPI00712226 RefSeq:NP_001015650.1 UniGene:Bt.7483
ProteinModelPortal:Q5E9W3 SMR:Q5E9W3 STRING:Q5E9W3 PRIDE:Q5E9W3
GeneID:533873 KEGG:bta:533873 CTD:1723 HOVERGEN:HBG006898
InParanoid:Q5E9W3 OrthoDB:EOG47WNNW SABIO-RK:Q5E9W3
NextBio:20876177 Uniprot:Q5E9W3
Length = 395
Score = 126 (49.4 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS--LWVRSSVKI---P-FFVKLTPNIT 644
AD L +N+S P+ G R + G+ E+ R ++ L R ++K+ P VK+ P++T
Sbjct: 205 ADYLVVNVSSPNTAGLRSLQ---GK-AELRRLLTKVLQERDALKVAHKPAVLVKIAPDLT 260
Query: 645 --NITDIAKAAYEGKADGVSAIN-TVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701
+ DIA E DG+ N TVS SL P GG+SG R
Sbjct: 261 AQDKEDIASVVRELGIDGLIVTNSTVSRPASLQGALRSEP----------GGLSGKPLRD 310
Query: 702 MGLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYI 760
+ + + + + PI+G+GG+ S AL+ I+AGA VQ+ +A+ + VV
Sbjct: 311 LSTQTIREMYALTQGRVPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVK 370
Query: 761 TGLQTLL 767
L+ LL
Sbjct: 371 RELEALL 377
Score = 50 (22.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V + G KF NP G+A+ + V ++ G+GF + + + N PR+ +
Sbjct: 78 LEVRVLGHKFRNPVGIAAGFDKHGEA-VDGLYKMGFGFVEIGSVT-PEPQEGNPRPRVFR 135
>TIGR_CMR|APH_1013 [details] [associations]
symbol:APH_1013 "dihydroorotate dehydrogenase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004158
"dihydroorotate oxidase activity" evidence=ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 UniPathway:UPA00070 GO:GO:0016020 Gene3D:3.20.20.70
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0044205 GO:GO:0006207
GO:GO:0004158 eggNOG:COG0167 KO:K00226 HOGENOM:HOG000225103
OMA:ALNRMGF TIGRFAMs:TIGR01036 ProtClustDB:PRK05286
RefSeq:YP_505574.1 ProteinModelPortal:Q2GJ77 STRING:Q2GJ77
GeneID:3930225 KEGG:aph:APH_1013 PATRIC:20950764
BioCyc:APHA212042:GHPM-1021-MONOMER Uniprot:Q2GJ77
Length = 350
Score = 127 (49.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 48/201 (23%), Positives = 88/201 (43%)
Query: 572 CTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGL--ACGQDPEMVRNISLWVRS 629
C+ ++ EL +K + + +NLS P+ G R + + + VR V
Sbjct: 144 CSDPPAEYAELVQKVYGLSS-YITINLSSPNTAGLRELQKRNSLNEILASVRKARYAVDH 202
Query: 630 SVKIPFFVKLTPNITN--ITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKK 687
+ +P +K+ P++++ + D+ K +G+ NT + L GTK
Sbjct: 203 AESVPILLKIDPDLSDEVLQDVVDEVLRHKINGIIVSNTTTNFKLL----------GTKA 252
Query: 688 LTTYGGVSGNATRPMGLKAVSSIAKMFPNFPIL-GIGGIDSADVALQFIQAGAHAVQICS 746
+ GG+SG + + ++ + +L G GG+ S AL+ I+AGA VQ+ +
Sbjct: 253 PISRGGLSGQPLFSLSTRVLADVYSQTRGRVVLVGCGGVSSGAQALEKIRAGASLVQLYT 312
Query: 747 AVQNQDFTVVDDYITGLQTLL 767
A+ F ++D L LL
Sbjct: 313 AIVYGGFGIIDKINMELADLL 333
>UNIPROTKB|Q83B23 [details] [associations]
symbol:rnfB "Electron transport complex protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001450
InterPro:IPR007202 InterPro:IPR010207 InterPro:IPR016463
InterPro:IPR017896 Pfam:PF00037 Pfam:PF04060 PIRSF:PIRSF005784
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886
GO:GO:0009055 GO:GO:0046872 GO:GO:0051539 GO:GO:0022900
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0051537 KO:K03616
OMA:NGEMINK TIGRFAMs:TIGR01944 RefSeq:NP_820677.1 HSSP:P55907
ProteinModelPortal:Q83B23 GeneID:1209607 KEGG:cbu:CBU_1696
PATRIC:17932129 HOGENOM:HOG000262939 ProtClustDB:CLSK914966
BioCyc:CBUR227377:GJ7S-1667-MONOMER Uniprot:Q83B23
Length = 213
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/80 (36%), Positives = 38/80 (47%)
Query: 485 VETILSVKDVIGQ-AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF 543
VET+L + D + Q +T E K +A + +D CI C KC AC AI
Sbjct: 50 VETLLKLADALEQDPTPSITTLEE-KTKPASIAFVREDECIGCTKCIQACPTD---AIIG 105
Query: 544 HPETHQAHVTDECTGCTLCL 563
+ +TD CTGC LCL
Sbjct: 106 ASKLMHTVITDACTGCELCL 125
>TIGR_CMR|CBU_1696 [details] [associations]
symbol:CBU_1696 "4Fe-4S binding domain protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0005506 "iron ion binding"
evidence=ISS] InterPro:IPR001450 InterPro:IPR007202
InterPro:IPR010207 InterPro:IPR016463 InterPro:IPR017896
Pfam:PF00037 Pfam:PF04060 PIRSF:PIRSF005784 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886 GO:GO:0009055
GO:GO:0046872 GO:GO:0051539 GO:GO:0022900 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0051537 KO:K03616 OMA:NGEMINK
TIGRFAMs:TIGR01944 RefSeq:NP_820677.1 HSSP:P55907
ProteinModelPortal:Q83B23 GeneID:1209607 KEGG:cbu:CBU_1696
PATRIC:17932129 HOGENOM:HOG000262939 ProtClustDB:CLSK914966
BioCyc:CBUR227377:GJ7S-1667-MONOMER Uniprot:Q83B23
Length = 213
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/80 (36%), Positives = 38/80 (47%)
Query: 485 VETILSVKDVIGQ-AVQRVTNYTELDNKKQVVALINDDMCINCGKCYMACNDSGYQAITF 543
VET+L + D + Q +T E K +A + +D CI C KC AC AI
Sbjct: 50 VETLLKLADALEQDPTPSITTLEE-KTKPASIAFVREDECIGCTKCIQACPTD---AIIG 105
Query: 544 HPETHQAHVTDECTGCTLCL 563
+ +TD CTGC LCL
Sbjct: 106 ASKLMHTVITDACTGCELCL 125
>UNIPROTKB|I3NI32 [details] [associations]
symbol:DHODH "Dihydroorotate dehydrogenase (quinone),
mitochondrial" species:9606 "Homo sapiens" [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] [GO:0006207 "'de
novo' pyrimidine nucleobase biosynthetic process" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912 GO:GO:0016020
Gene3D:3.20.20.70 GO:GO:0006207 GO:GO:0006222 GO:GO:0004158
EMBL:AC009087 TIGRFAMs:TIGR01036 HGNC:HGNC:2867 EMBL:AC009127
ProteinModelPortal:I3NI32 SMR:I3NI32 Ensembl:ENST00000572887
Bgee:I3NI32 Uniprot:I3NI32
Length = 393
Score = 118 (46.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 55/185 (29%), Positives = 88/185 (47%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS--LWVRSSVKI---P-FFVKLTPNIT 644
AD L +N+S P+ G R + G+ E+ R ++ L R ++ P VK+ P++T
Sbjct: 205 ADYLVVNVSSPNTAGLRSLQ---GK-AELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLT 260
Query: 645 NIT--DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702
+ DIA E DG+ NT ++S P G + T GG+SG R +
Sbjct: 261 SQDKEDIASVVKELGIDGLIVTNT-----TVS---RPAGLQGALRSET-GGLSGKPLRDL 311
Query: 703 GLKAVSSIAKMFPNFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITG 762
+ + + + PI+G+GG+ S AL+ I+AGA VQ+ +A+ VV
Sbjct: 312 STQTIREMYAL-TQVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRE 370
Query: 763 LQTLL 767
L+ LL
Sbjct: 371 LEALL 375
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V + G KF NP G+A+ + V ++ G+GF + + K N PR+ +
Sbjct: 78 LEVRVLGHKFRNPVGIAAGFDKHGEA-VDGLYKMGFGFVEIGSVT-PKPQEGNPRPRVFR 135
>UNIPROTKB|Q02127 [details] [associations]
symbol:DHODH "Dihydroorotate dehydrogenase (quinone),
mitochondrial" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=IEA] [GO:0090140 "regulation of mitochondrial fission"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0007565 "female pregnancy" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0031000
"response to caffeine" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042594 "response to starvation" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0044205 "'de
novo' UMP biosynthetic process" evidence=IEA] [GO:0006207 "'de
novo' pyrimidine nucleobase biosynthetic process" evidence=NAS]
[GO:0005743 "mitochondrial inner membrane" evidence=NAS;TAS]
[GO:0004152 "dihydroorotate dehydrogenase activity"
evidence=NAS;TAS] [GO:0006206 "pyrimidine nucleobase metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0046134 "pyrimidine nucleoside
biosynthetic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0016021 Gene3D:3.20.20.70 GO:GO:0005743
GO:GO:0043065 GO:GO:0044205 GO:GO:0006207 DrugBank:DB01097
DrugBank:DB01117 GO:GO:0046134 GO:GO:0004158 eggNOG:COG0167
GO:GO:0004152 GO:GO:0090140 HOGENOM:HOG000225103 KO:K00254
OMA:ALNRMGF TIGRFAMs:TIGR01036 CTD:1723 HOVERGEN:HBG006898
OrthoDB:EOG47WNNW EMBL:M94065 EMBL:AK292293 EMBL:BC065245
IPI:IPI00024462 PIR:PC1219 RefSeq:NP_001352.2 UniGene:Hs.654427
PDB:1D3G PDB:1D3H PDB:2B0M PDB:2BXV PDB:2FPT PDB:2FPV PDB:2FPY
PDB:2FQI PDB:2PRH PDB:2PRL PDB:2PRM PDB:2WV8 PDB:3F1Q PDB:3FJ6
PDB:3FJL PDB:3G0U PDB:3G0X PDB:3KVJ PDB:3KVK PDB:3KVL PDB:3KVM
PDB:3U2O PDB:3ZWS PDB:3ZWT PDBsum:1D3G PDBsum:1D3H PDBsum:2B0M
PDBsum:2BXV PDBsum:2FPT PDBsum:2FPV PDBsum:2FPY PDBsum:2FQI
PDBsum:2PRH PDBsum:2PRL PDBsum:2PRM PDBsum:2WV8 PDBsum:3F1Q
PDBsum:3FJ6 PDBsum:3FJL PDBsum:3G0U PDBsum:3G0X PDBsum:3KVJ
PDBsum:3KVK PDBsum:3KVL PDBsum:3KVM PDBsum:3U2O PDBsum:3ZWS
PDBsum:3ZWT ProteinModelPortal:Q02127 SMR:Q02127 IntAct:Q02127
STRING:Q02127 PhosphoSite:Q02127 DMDM:56405372 PaxDb:Q02127
PRIDE:Q02127 Ensembl:ENST00000219240 GeneID:1723 KEGG:hsa:1723
UCSC:uc002fbp.3 GeneCards:GC16P072042 HGNC:HGNC:2867 HPA:HPA010123
HPA:HPA011942 MIM:126064 MIM:263750 neXtProt:NX_Q02127 Orphanet:246
PharmGKB:PA27327 InParanoid:Q02127 SABIO-RK:Q02127 BindingDB:Q02127
ChEMBL:CHEMBL1966 EvolutionaryTrace:Q02127 GenomeRNAi:1723
NextBio:6971 Bgee:Q02127 CleanEx:HS_DHODH Genevestigator:Q02127
GermOnline:ENSG00000102967 Uniprot:Q02127
Length = 395
Score = 116 (45.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 55/186 (29%), Positives = 88/186 (47%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS--LWVRSSVKI---P-FFVKLTPNIT 644
AD L +N+S P+ G R + G+ E+ R ++ L R ++ P VK+ P++T
Sbjct: 205 ADYLVVNVSSPNTAGLRSLQ---GK-AELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLT 260
Query: 645 NIT--DIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPM 702
+ DIA E DG+ NT ++S P G + T GG+SG R +
Sbjct: 261 SQDKEDIASVVKELGIDGLIVTNT-----TVS---RPAGLQGALRSET-GGLSGKPLRDL 311
Query: 703 GLKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYIT 761
+ + + + PI+G+GG+ S AL+ I+AGA VQ+ +A+ VV
Sbjct: 312 STQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKR 371
Query: 762 GLQTLL 767
L+ LL
Sbjct: 372 ELEALL 377
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V + G KF NP G+A+ + V ++ G+GF + + K N PR+ +
Sbjct: 78 LEVRVLGHKFRNPVGIAAGFDKHGEA-VDGLYKMGFGFVEIGSVT-PKPQEGNPRPRVFR 135
>UNIPROTKB|P76440 [details] [associations]
symbol:preT "NADH-dependent dihydropyrimidine dehydrogenase
subunit" species:83333 "Escherichia coli K-12" [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006208 "pyrimidine nucleobase catabolic
process" evidence=IDA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IDA] [GO:0004159 "dihydrouracil dehydrogenase (NAD+)
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA;IDA] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0003954
GO:GO:0006208 SUPFAM:SSF46548 GO:GO:0004159 PIR:A64983
RefSeq:NP_416651.1 RefSeq:YP_490385.1 ProteinModelPortal:P76440
SMR:P76440 DIP:DIP-28055N IntAct:P76440
EnsemblBacteria:EBESCT00000002435 EnsemblBacteria:EBESCT00000016843
GeneID:12930175 GeneID:949049 KEGG:ecj:Y75_p2108 KEGG:eco:b2146
PATRIC:32119635 EchoBASE:EB3827 EcoGene:EG14074 OMA:SLKMTRE
ProtClustDB:PRK11749 BioCyc:EcoCyc:G7145-MONOMER
BioCyc:ECOL316407:JW2133-MONOMER BioCyc:MetaCyc:G7145-MONOMER
Genevestigator:P76440 Uniprot:P76440
Length = 412
Score = 100 (40.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/65 (27%), Positives = 40/65 (61%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IPQ+RLP ++ E+ ++ +GV I+C + +T+E+L+ + A+ + +G + +
Sbjct: 167 IPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNT-LTLEQLKAEN-RAVLVTVGLSSGSG 224
Query: 104 IPIFQ 108
+P+F+
Sbjct: 225 LPLFE 229
Score = 71 (30.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 259 DNDVLEAIKPVKLDKYGYPEVNYTTMATSV-----PGVFCGGDTANLSDTTVESVNDGKT 313
D +L + +LD + E T+ T P VF GD T V +V GK
Sbjct: 338 DKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKE 397
Query: 314 AAWHIHKYIQ 323
AA IH Y++
Sbjct: 398 AAEAIHHYLE 407
>UNIPROTKB|E2RPD0 [details] [associations]
symbol:DHODH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 GO:GO:0016020 Gene3D:3.20.20.70 GO:GO:0006207
GO:GO:0006222 GO:GO:0004158 OMA:ALNRMGF TIGRFAMs:TIGR01036
GeneTree:ENSGT00500000044924 EMBL:AAEX03004090
Ensembl:ENSCAFT00000032204 NextBio:20896304 Uniprot:E2RPD0
Length = 416
Score = 118 (46.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 53/185 (28%), Positives = 88/185 (47%)
Query: 591 ADALELNLSCPHGMGERGM-GLACGQDPEMVRNISLWVRSSV----KIPFFVKLTPNIT- 644
AD L +N+S P+ G R + G A + ++ + L R ++ K VK+ P++T
Sbjct: 226 ADYLVVNVSSPNTAGLRSLQGKA--ELRHLLAKV-LQERDALQGAHKPAVLVKIAPDLTA 282
Query: 645 -NITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRPMG 703
+ DIA E DG+ NT ++S P G + + GG+SG R +
Sbjct: 283 QDKEDIASVVKELGIDGLIITNT-----TVS---RPASLQGALR-SEIGGLSGKPLRDLS 333
Query: 704 LKAVSSIAKMFPN-FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVDDYITG 762
+ + + + PI+G+GG+ S AL+ I+AGA VQ+ +A+ + VV
Sbjct: 334 TQTIREMYALTQGGVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGMIKRE 393
Query: 763 LQTLL 767
L+ LL
Sbjct: 394 LEALL 398
Score = 52 (23.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 348 ISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMVTNVSPRIVK 407
+ V + G +F NP G+A+ + V ++ G+GF + + K N PR+ +
Sbjct: 99 LEVRVLGHRFRNPIGIAAGFDKHGEA-VDGLYKMGFGFVEIGSVT-PKPQEGNPRPRVFR 156
>FB|FBgn0000447 [details] [associations]
symbol:Dhod "Dihydroorotate dehydrogenase" species:7227
"Drosophila melanogaster" [GO:0004152 "dihydroorotate dehydrogenase
activity" evidence=ISS;IDA] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=ISS;NAS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS;NAS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 EMBL:AE014297 GO:GO:0016021 Gene3D:3.20.20.70
GO:GO:0005743 GO:GO:0005758 GO:GO:0044205 GO:GO:0006207
GO:GO:0004158 eggNOG:COG0167 GO:GO:0004152 KO:K00254 OMA:ALNRMGF
TIGRFAMs:TIGR01036 EMBL:L00964 EMBL:BT009968 EMBL:BT010096
EMBL:X17297 PIR:JN0500 PIR:S15742 RefSeq:NP_477224.1
RefSeq:NP_599138.3 UniGene:Dm.7901 ProteinModelPortal:P32748
SMR:P32748 DIP:DIP-23907N IntAct:P32748 MINT:MINT-742593
STRING:P32748 PaxDb:P32748 EnsemblMetazoa:FBtr0081890
EnsemblMetazoa:FBtr0300442 GeneID:41022 KEGG:dme:Dmel_CG9741
CTD:41022 FlyBase:FBgn0000447 GeneTree:ENSGT00500000044924
InParanoid:P32748 OrthoDB:EOG43BK4M PhylomeDB:P32748
GenomeRNAi:41022 NextBio:821763 Bgee:P32748 GermOnline:CG9741
Uniprot:P32748
Length = 405
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 54/192 (28%), Positives = 91/192 (47%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNISLWV---RSSV----KIPFFVKLTPNI 643
AD L +N+S P+ G R M Q E +R + V +SS+ +P +KL+P++
Sbjct: 209 ADYLVINVSSPNTKGLRDM-----QSKEKLRELLEQVNDTKSSLDKNKNVPILLKLSPDL 263
Query: 644 T--NITDIAKAAYEGKA--DGVSAINTVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNAT 699
+ ++ DI K+ DG+ NT ++ + K GG+SG
Sbjct: 264 SLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENIEKN---------KLAEETGGLSGP-- 312
Query: 700 RPMGLKAVSSIAKMFP----NFPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTV 755
P+ ++ IA+M+ PI+G+GG+ S A + I+AGA VQI +A+ + +
Sbjct: 313 -PLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYTALVYEGPAL 371
Query: 756 VDDYITGLQTLL 767
V+D L L+
Sbjct: 372 VEDIKAELSALI 383
>UNIPROTKB|Q60AS6 [details] [associations]
symbol:MCA0768 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 Gene3D:3.20.20.70 EMBL:AE017282
GenomeReviews:AE017282_GR GO:GO:0006222 GO:GO:0004152 KO:K00226
RefSeq:YP_113271.1 ProteinModelPortal:Q60AS6 GeneID:3104972
KEGG:mca:MCA0768 PATRIC:22605326 HOGENOM:HOG000224734 OMA:IASINCY
ProtClustDB:PRK07565 Uniprot:Q60AS6
Length = 333
Score = 106 (42.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 52/217 (23%), Positives = 98/217 (45%)
Query: 566 LIASIMCTYNKDDWLELSKKTEKAGADALELNLSCPHGMGERGMGLACGQDPEMVRNISL 625
+IAS+ C + + W++ +++ E+AGA LELN+ +G+ E ++ G+ + N
Sbjct: 104 VIASLNCV-SDEGWIDYARQIEQAGAHGLELNI---YGI-ETDPTISGGEIEQRYVNSLT 158
Query: 626 WVRSSVKIPFFVKLTPNITNITDIAKAAYEGKADGVSAINTVSGLMSLSADGNPWPAVGT 685
V+S+V IP +KL+P + + +A AD + N P V
Sbjct: 159 AVKSAVHIPVALKLSPYFSAMAHMAVRLERAGADALVLFNRFYQ-----------PDVDV 207
Query: 686 KKLTTYGGVSGNATRPMGLKAVSSIAKMFPNFPI-LGIG-GIDSADVALQFIQAGAHAVQ 743
++L + + ++ + L + IA + + LG G+ A ++++ AGA AV
Sbjct: 208 ERLDLHPSLELSSPSEIRLPLLW-IALLHGKLRLSLGATTGVAGAGEVVKYLLAGADAVM 266
Query: 744 ICSAVQNQDFTVVDDYITGLQTLL----YLKSTQLKG 776
SA+ + + GL+ + + T LKG
Sbjct: 267 TASALLRHGPSYAAVLVKGLEHWMDAHGFASVTLLKG 303
Score = 60 (26.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 346 VDISVEICGLKFPNPFGLASAPPTTASSMVRRAFENGWGFAVTKTFSLQKDMV 398
+D+S GL +P +ASA P + S R E+G G A FSL ++ +
Sbjct: 1 MDLSTNYMGLSLKHPV-VASASPLSESLHGIRRLEDG-GVAAVVLFSLFEEQI 51
>UNIPROTKB|G8JKZ0 [details] [associations]
symbol:G8JKZ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00912
GO:GO:0016020 Gene3D:3.20.20.70 GO:GO:0006207 GO:GO:0006222
GO:GO:0004158 TIGRFAMs:TIGR01036 GeneTree:ENSGT00500000044924
EMBL:DAAA02046749 EMBL:DAAA02046753 EMBL:DAAA02046752
EMBL:DAAA02046750 EMBL:DAAA02046751 Ensembl:ENSBTAT00000026495
Uniprot:G8JKZ0
Length = 397
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 57/190 (30%), Positives = 89/190 (46%)
Query: 591 ADALELNLSCPHGMGERGMGLACGQDPEMVRNIS--LWVRSSVKI---P-FFVKLTPNIT 644
AD L +N+S P+ G R + G+ E+ R ++ L R ++K+ P VK+ P++T
Sbjct: 204 ADYLVVNVSSPNTAGLRSLQ---GK-AELRRLLTKVLQERDALKVAHKPAVLVKIAPDLT 259
Query: 645 --NITDIAKAAYEGKADGVSAIN-TVSGLMSLSADGNPWPAVGTKKLTTYGGVSGNATRP 701
+ DIA E DG+ N TVS SL P GG+SG R
Sbjct: 260 AQDKEDIASVVRELGIDGLIVTNSTVSRPASLQGALRSEP----------GGLSGKPLRD 309
Query: 702 MGLKAVSSIAKMFPN----FPILGIGGIDSADVALQFIQAGAHAVQICSAVQNQDFTVVD 757
+ + + + + PI+G+GG+ S AL+ I+AGA VQ+ +A+ + VV
Sbjct: 310 LSTQTIREMYALTQGKDSIVPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVG 369
Query: 758 DYITGLQTLL 767
L+ LL
Sbjct: 370 GVKRELEALL 379
>UNIPROTKB|Q8Z5A6 [details] [associations]
symbol:preT "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreT homolog" species:90370 "Salmonella enterica subsp.
enterica serovar Typhi" [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISS] InterPro:IPR000103 InterPro:IPR001327
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
PRINTS:PR00469 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 GO:GO:0003954 EMBL:AE014613
GenomeReviews:AE014613_GR GenomeReviews:AL513382_GR GO:GO:0006208
SUPFAM:SSF46548 GO:GO:0004159 OMA:SLKMTRE ProtClustDB:PRK11749
EMBL:AL627273 RefSeq:NP_804518.1 ProteinModelPortal:Q8Z5A6
GeneID:1069835 KEGG:stt:t0669 KEGG:sty:STY2416 PATRIC:18542783
Uniprot:Q8Z5A6
Length = 413
Score = 88 (36.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 31/148 (20%), Positives = 64/148 (43%)
Query: 44 IPQYRLPFDAVNFEVELVKDLGVKIECERSLSTRDITIEKLRKDGYTAIFIGIGKPNANV 103
IP +RLP ++ E+ + ++GV I+C + +++ +L+ + Y A+ + +G +
Sbjct: 167 IPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGG-SLSLAQLKAE-YRAVLMTVGMSCGSD 224
Query: 104 IPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKGTVIVLGAGDTAFDCA 163
+P+F+ + + FL R + + +++G GD A D A
Sbjct: 225 LPLFEQASH---VEIAVDFLQRARQADGDIS-----------VPRSALIIGGGDVAMDVA 270
Query: 164 TSALRCGANKVLVVFRKGCTNIRAVPEE 191
++ G V V R+ A +E
Sbjct: 271 STLKILGCPSVTCVAREELAEFPASEKE 298
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 242 IKLKANYIISAFGS-TLLDNDV-LEAIKPVKLDKYGYPEVNYTTMATSVPGVFCGGDTAN 299
+ L+A II A G LDN ++A + +D + Y T P +F GD
Sbjct: 334 LTLEAENIILAVGQHARLDNFAEIKAQHNI-IDTHNYQ--------TDDPAIFAAGDIVK 384
Query: 300 LSDTTVESVNDGKTAAWHIHKYIQE 324
T V +V GK AA IH Y++E
Sbjct: 385 GDKTVVYAVKTGKEAAQAIHHYLEE 409
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 842 827 0.00079 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 628 (67 KB)
Total size of DFA: 404 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 70.08u 0.11s 70.19t Elapsed: 00:00:23
Total cpu time: 70.11u 0.11s 70.22t Elapsed: 00:00:25
Start: Thu Aug 15 15:05:26 2013 End: Thu Aug 15 15:05:51 2013