Your job contains 1 sequence.
>psy16200
MPTLKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATSSKKGLCGGC
KKESLPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEE
KCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL
DND
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16200
(183 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:2139667 - symbol:Dpyd "dihydropyrimidine dehydrog... 543 1.8e-51 1
RGD|621218 - symbol:Dpyd "dihydropyrimidine dehydrogenase... 539 5.0e-51 1
UNIPROTKB|O89000 - symbol:Dpyd "Dihydropyrimidine dehydro... 539 5.0e-51 1
UNIPROTKB|Q12882 - symbol:DPYD "Dihydropyrimidine dehydro... 532 2.8e-50 1
UNIPROTKB|Q5R895 - symbol:DPYD "Dihydropyrimidine dehydro... 532 2.8e-50 1
UNIPROTKB|F1S550 - symbol:DPYD "Dihydropyrimidine dehydro... 527 7.4e-50 1
UNIPROTKB|F1N549 - symbol:DPYD "Dihydropyrimidine dehydro... 527 9.8e-50 1
UNIPROTKB|Q28943 - symbol:DPYD "Dihydropyrimidine dehydro... 527 9.8e-50 1
ZFIN|ZDB-GENE-040426-2459 - symbol:dpydb "dihydropyrimidi... 525 1.6e-49 1
FB|FBgn0086450 - symbol:su(r) "suppressor of rudimentary"... 524 2.1e-49 1
WB|WBGene00016103 - symbol:dpyd-1 species:6239 "Caenorhab... 524 2.3e-49 1
UNIPROTKB|Q18164 - symbol:dpyd-1 "Dihydropyrimidine dehyd... 524 2.3e-49 1
UNIPROTKB|Q28007 - symbol:DPYD "Dihydropyrimidine dehydro... 516 1.5e-48 1
UNIPROTKB|E2RSQ9 - symbol:DPYD "Uncharacterized protein" ... 503 3.8e-47 1
UNIPROTKB|E1BRA0 - symbol:DPYD "Uncharacterized protein" ... 461 1.0e-42 1
DICTYBASE|DDB_G0267966 - symbol:pyd1 "dihydropyrimidine d... 454 6.8e-42 1
UNIPROTKB|E1C4J1 - symbol:DPYD "Uncharacterized protein" ... 441 1.4e-40 1
UNIPROTKB|F1M412 - symbol:F1M412 "Uncharacterized protein... 394 1.6e-35 1
TIGR_CMR|SO_1324 - symbol:SO_1324 "glutamate synthase, sm... 163 2.9e-11 1
TIGR_CMR|CHY_1991 - symbol:CHY_1991 "glutamate synthase (... 157 1.3e-10 1
UNIPROTKB|P09832 - symbol:gltD "glutamate synthase, small... 156 1.7e-10 1
TIGR_CMR|GSU_3057 - symbol:GSU_3057 "glutamate synthase (... 147 1.6e-09 1
UNIPROTKB|Q9KPJ0 - symbol:VC_2377 "Glutamate synthase, sm... 147 1.6e-09 1
TIGR_CMR|VC_2377 - symbol:VC_2377 "glutamate synthase, sm... 147 1.6e-09 1
UNIPROTKB|P37127 - symbol:aegA species:83333 "Escherichia... 147 2.7e-09 1
TIGR_CMR|DET_0038 - symbol:DET_0038 "glutamate synthase (... 142 5.4e-09 1
TIGR_CMR|CPS_4502 - symbol:CPS_4502 "glutamate synthase, ... 139 1.2e-08 1
UNIPROTKB|Q4KJI5 - symbol:gltD "Glutamate synthase, small... 128 1.8e-07 1
UNIPROTKB|Q0C617 - symbol:gltD "Glutamate synthase, small... 125 3.9e-07 1
UNIPROTKB|Q46811 - symbol:ygfK "predicted oxidoreductase,... 125 1.1e-06 1
TIGR_CMR|SPO_3770 - symbol:SPO_3770 "glutamate synthase, ... 111 0.00021 1
>MGI|MGI:2139667 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0002058 "uracil binding" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004152 "dihydroorotate dehydrogenase
activity" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006145 "purine
nucleobase catabolic process" evidence=ISO] [GO:0006208 "pyrimidine
nucleobase catabolic process" evidence=ISO;IDA] [GO:0006210
"thymine catabolic process" evidence=ISO] [GO:0006212 "uracil
catabolic process" evidence=ISO] [GO:0006214 "thymidine catabolic
process" evidence=ISO] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=ISO] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;IDA] [GO:0019860
"uracil metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=ISO] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO;IDA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 MGI:MGI:2139667 GO:GO:0005829 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI HSSP:Q28943 eggNOG:COG0167
GO:GO:0006210 EMBL:BC039699 IPI:IPI00229705 RefSeq:NP_740748.1
UniGene:Mm.27907 ProteinModelPortal:Q8CHR6 SMR:Q8CHR6 STRING:Q8CHR6
PhosphoSite:Q8CHR6 PaxDb:Q8CHR6 PRIDE:Q8CHR6
Ensembl:ENSMUST00000039177 GeneID:99586 KEGG:mmu:99586
UCSC:uc008rdh.1 InParanoid:Q8CHR6 NextBio:354029 Bgee:Q8CHR6
Genevestigator:Q8CHR6 Uniprot:Q8CHR6
Length = 1025
Score = 543 (196.2 bits), Expect = 1.8e-51, P = 1.8e-51
Identities = 112/181 (61%), Positives = 129/181 (71%)
Query: 1 MPTLKLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXX 60
M L+++GY A FIGIG P IFQGLT+ GFYTSK FLP VA
Sbjct: 266 MTLSSLKENGYRAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKSSKTGMCACH 325
Query: 61 XXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEE 120
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEE++LA EE
Sbjct: 326 SPL--PSIRGAVIVLGAGDTAFDCATSALRCGALRVFIVFRKGFVNIRAVPEEMELAKEE 383
Query: 121 KCEFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL 180
KCEFLPF+SP +V VKD KI MQF RTEQ+E G WVEDEEQ ++LKA+ +ISAFGS L
Sbjct: 384 KCEFLPFLSPRKVIVKDGKIVAMQFVRTEQDETGNWVEDEEQTVRLKADVVISAFGSVLE 443
Query: 181 D 181
D
Sbjct: 444 D 444
>RGD|621218 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0002058 "uracil binding" evidence=IDA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006145 "purine nucleobase catabolic process"
evidence=ISO] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISO;IDA;TAS] [GO:0006210 "thymine catabolic process"
evidence=ISO] [GO:0006212 "uracil catabolic process"
evidence=ISO;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISO;ISS] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IDA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;ISS;IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0019860
"uracil metabolic process" evidence=IDA] [GO:0042493 "response to
drug" evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=IDA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 539 (194.8 bits), Expect = 5.0e-51, P = 5.0e-51
Identities = 111/176 (63%), Positives = 128/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT+ GFYTSK FLP VA
Sbjct: 271 LKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPGMCACHSPL-- 328
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFL
Sbjct: 329 PSVRGAVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFANIRAVPEEMELAKEEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VKD KI GMQF RTEQ+E G WVEDEEQ ++LKA+ +IS FGS L D
Sbjct: 389 PFLSPRKVIVKDGKIVGMQFVRTEQDETGNWVEDEEQIVRLKADVVISPFGSVLDD 444
>UNIPROTKB|O89000 [details] [associations]
symbol:Dpyd "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:10116 "Rattus norvegicus" [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 539 (194.8 bits), Expect = 5.0e-51, P = 5.0e-51
Identities = 111/176 (63%), Positives = 128/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT+ GFYTSK FLP VA
Sbjct: 271 LKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPGMCACHSPL-- 328
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFL
Sbjct: 329 PSVRGAVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFANIRAVPEEMELAKEEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VKD KI GMQF RTEQ+E G WVEDEEQ ++LKA+ +IS FGS L D
Sbjct: 389 PFLSPRKVIVKDGKIVGMQFVRTEQDETGNWVEDEEQIVRLKADVVISPFGSVLDD 444
>UNIPROTKB|Q12882 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9606 "Homo sapiens" [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0019483 "beta-alanine biosynthetic process" evidence=IEA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IMP;IDA;TAS] [GO:0006212 "uracil catabolic process"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0042803 "protein homodimerization
activity" evidence=ISS;IDA] [GO:0006145 "purine nucleobase
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS;IMP] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] [GO:0050661 "NADP binding"
evidence=ISS] [GO:0006210 "thymine catabolic process" evidence=IDA]
[GO:0006214 "thymidine catabolic process" evidence=IDA] [GO:0006206
"pyrimidine nucleobase metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0046135
"pyrimidine nucleoside catabolic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005829 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0016491 GO:GO:0051539
EMBL:CH471097 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006145 DrugBank:DB01101 GO:GO:0006222 SUPFAM:SSF46548
CTD:1806 HOVERGEN:HBG004351 KO:K00207 OrthoDB:EOG44J2H8
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 eggNOG:COG0167 EMBL:U09178 EMBL:U20938
EMBL:AB003063 EMBL:BT006740 EMBL:AK291217 EMBL:AL356457
EMBL:AC091608 EMBL:AC093576 EMBL:AC099787 EMBL:AC114878
EMBL:AC138135 EMBL:BX908805 EMBL:BC008379 EMBL:BC064027
EMBL:BC108742 EMBL:BC131777 EMBL:BC131778 EMBL:X95670 EMBL:U57655
IPI:IPI00029772 IPI:IPI00095889 PIR:A54718 RefSeq:NP_000101.2
RefSeq:NP_001153773.1 UniGene:Hs.335034 ProteinModelPortal:Q12882
SMR:Q12882 IntAct:Q12882 STRING:Q12882 PhosphoSite:Q12882
DMDM:160332325 PaxDb:Q12882 PRIDE:Q12882 DNASU:1806
Ensembl:ENST00000306031 Ensembl:ENST00000370192 GeneID:1806
KEGG:hsa:1806 UCSC:uc001drv.3 GeneCards:GC01M097543
H-InvDB:HIX0000804 HGNC:HGNC:3012 HPA:CAB033241 MIM:274270
MIM:612779 neXtProt:NX_Q12882 Orphanet:240839 Orphanet:240855
Orphanet:1675 Orphanet:240955 Orphanet:240963 PharmGKB:PA145
InParanoid:Q12882 BindingDB:Q12882 ChEMBL:CHEMBL3172 ChiTaRS:DPYD
DrugBank:DB00109 GenomeRNAi:1806 NextBio:7361 ArrayExpress:Q12882
Bgee:Q12882 CleanEx:HS_DPYD Genevestigator:Q12882
GermOnline:ENSG00000188641 GO:GO:0006210 Uniprot:Q12882
Length = 1025
Score = 532 (192.3 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 108/176 (61%), Positives = 127/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L++ GY A FIGIG P N IFQGLT++ GFYTSK FLP VA
Sbjct: 271 LKEKGYKAAFIGIGLPEPNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCACHSPL-- 328
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFL
Sbjct: 329 PSIRGVVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VK +I MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D
Sbjct: 389 PFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSD 444
>UNIPROTKB|Q5R895 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9601 "Pongo abelii" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006212 "uracil catabolic process" evidence=ISS] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0046872 GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797
HOVERGEN:HBG004351 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 HSSP:Q28943
EMBL:CR859859 RefSeq:NP_001126169.1 UniGene:Pab.11422
ProteinModelPortal:Q5R895 SMR:Q5R895 PRIDE:Q5R895 GeneID:100173131
KEGG:pon:100173131 InParanoid:Q5R895 Uniprot:Q5R895
Length = 1025
Score = 532 (192.3 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 108/176 (61%), Positives = 127/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L++ GY A FIGIG P N IFQGLT++ GFYTSK FLP VA
Sbjct: 271 LKEKGYKAAFIGIGLPEPNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAGMCACHSPL-- 328
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEE++LA EEKCEFL
Sbjct: 329 PSIRGVVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VK +I MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D
Sbjct: 389 PFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSD 444
>UNIPROTKB|F1S550 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:CU138571 EMBL:CU151845 EMBL:CU179627 EMBL:CU179674
EMBL:CU179711 EMBL:CU207270 EMBL:FP017306
Ensembl:ENSSSCT00000007532 Uniprot:F1S550
Length = 949
Score = 527 (190.6 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 107/176 (60%), Positives = 127/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT++ GFYTSK FLP VA
Sbjct: 195 LKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPL-- 252
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFL
Sbjct: 253 PSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFL 312
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VK +I +QF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D
Sbjct: 313 PFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRD 368
>UNIPROTKB|F1N549 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 IPI:IPI00707298 UniGene:Bt.2424 GO:GO:0004158
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:DAAA02007797 EMBL:DAAA02007798 EMBL:DAAA02007799
EMBL:DAAA02007800 EMBL:DAAA02007801 EMBL:DAAA02007802
EMBL:DAAA02007803 EMBL:DAAA02007804 EMBL:DAAA02007805
EMBL:DAAA02007806 EMBL:DAAA02007807 EMBL:DAAA02007808
EMBL:DAAA02007809 ProteinModelPortal:F1N549
Ensembl:ENSBTAT00000007139 ArrayExpress:F1N549 Uniprot:F1N549
Length = 1025
Score = 527 (190.6 bits), Expect = 9.8e-50, P = 9.8e-50
Identities = 108/176 (61%), Positives = 127/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT++ GFYTSK FLP VA
Sbjct: 271 LKEEGYKAAFIGIGLPEPKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLLS 330
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
++GTVIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFL
Sbjct: 331 --IRGTVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFVNIRAVPEEVELAREEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VK +I MQF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D
Sbjct: 389 PFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDEDQIVCLKADVVISAFGSVLSD 444
>UNIPROTKB|Q28943 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0010181 "FMN binding" evidence=IDA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IDA] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0050661 "NADP binding"
evidence=IDA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019483 "beta-alanine biosynthetic process"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0019483 GO:GO:0010181 GO:GO:0006222 DrugBank:DB00544
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 eggNOG:COG0167
EMBL:U09179 PIR:B54718 RefSeq:NP_999209.1 UniGene:Ssc.153 PDB:1GT8
PDB:1GTE PDB:1GTH PDB:1H7W PDB:1H7X PDBsum:1GT8 PDBsum:1GTE
PDBsum:1GTH PDBsum:1H7W PDBsum:1H7X ProteinModelPortal:Q28943
SMR:Q28943 STRING:Q28943 GeneID:397109 KEGG:ssc:397109
EvolutionaryTrace:Q28943 Uniprot:Q28943
Length = 1025
Score = 527 (190.6 bits), Expect = 9.8e-50, P = 9.8e-50
Identities = 107/176 (60%), Positives = 127/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT++ GFYTSK FLP VA
Sbjct: 271 LKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPL-- 328
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFL
Sbjct: 329 PSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VK +I +QF RTEQ+E G+W EDE+Q + LKA+ +ISAFGS L D
Sbjct: 389 PFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRD 444
>ZFIN|ZDB-GENE-040426-2459 [details] [associations]
symbol:dpydb "dihydropyrimidine dehydrogenase b"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0017113 "dihydropyrimidine dehydrogenase (NADP+)
activity" evidence=IEA;ISS] [GO:0006212 "uracil catabolic process"
evidence=ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF01180 Pfam:PF07992 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 ZFIN:ZDB-GENE-040426-2459 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 GO:GO:0009055 GO:GO:0046872
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 HOVERGEN:HBG004351 KO:K00207
OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:BC066602 IPI:IPI00502639
RefSeq:NP_998058.1 UniGene:Dr.161770 HSSP:Q28943
ProteinModelPortal:Q6NYG8 SMR:Q6NYG8 STRING:Q6NYG8 PRIDE:Q6NYG8
GeneID:405829 KEGG:dre:405829 CTD:405829 eggNOG:COG0167
InParanoid:Q6NYG8 NextBio:20817792 ArrayExpress:Q6NYG8
Uniprot:Q6NYG8
Length = 1022
Score = 525 (189.9 bits), Expect = 1.6e-49, P = 1.6e-49
Identities = 106/176 (60%), Positives = 128/176 (72%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY ++IGIG P AN IF+GLT E GFYTSK FLP VA
Sbjct: 271 LKEEGYQVVYIGIGLPQANRDKIFEGLTTEQGFYTSKDFLPLVAKASKIGMCNCRSQL-- 328
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P L G VIVLGAGDTAFDCATSALRCGA +V VVFRKG TNIRAVPEE++ A EEKCEFL
Sbjct: 329 PKLHGNVIVLGAGDTAFDCATSALRCGARRVFVVFRKGFTNIRAVPEEMEAAKEEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V K+ +++G++F RTEQ + G W+ DEEQ + LKA++IISAFGS L D
Sbjct: 389 PFLSPHEVIKKNGRVSGLRFCRTEQQDDGTWIVDEEQIVHLKADFIISAFGSMLND 444
>FB|FBgn0086450 [details] [associations]
symbol:su(r) "suppressor of rudimentary" species:7227
"Drosophila melanogaster" [GO:0004159 "dihydrouracil dehydrogenase
(NAD+) activity" evidence=TAS] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;NAS] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IGI] InterPro:IPR001295 InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS00912 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006207
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
eggNOG:COG0167 EMBL:DQ027826 ProteinModelPortal:Q4TWT4 SMR:Q4TWT4
STRING:Q4TWT4 PaxDb:Q4TWT4 PRIDE:Q4TWT4 FlyBase:FBgn0086450
InParanoid:Q4TWT4 OrthoDB:EOG451C5K ArrayExpress:Q4TWT4 Bgee:Q4TWT4
Uniprot:Q4TWT4
Length = 1031
Score = 524 (189.5 bits), Expect = 2.1e-49, P = 2.1e-49
Identities = 106/178 (59%), Positives = 123/178 (69%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L G+ A+F+GIG P + PIF GL GFYTSK FLP V+
Sbjct: 268 LLSTGHDAVFVGIGLPEPKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGLCACKAAAGL 327
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P L G VIVLGAGDTAFDCATSALRCGA +V VVFRKG + IRAVPEEV+LA +E+CE L
Sbjct: 328 PKLHGNVIVLGAGDTAFDCATSALRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELL 387
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDND 183
P++SP +V VKD I M+F RTEQNE EWVEDEEQ +LKAN++ISAFGS L D D
Sbjct: 388 PYLSPRKVIVKDGLITAMEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQD 445
>WB|WBGene00016103 [details] [associations]
symbol:dpyd-1 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158
GO:GO:0017113 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
EMBL:FO080672 PIR:T15616 RefSeq:NP_508927.2
ProteinModelPortal:Q18164 DIP:DIP-25332N MINT:MINT-1123364
STRING:Q18164 PaxDb:Q18164 EnsemblMetazoa:C25F6.3 GeneID:180818
KEGG:cel:CELE_C25F6.3 CTD:180818 WormBase:C25F6.3
GeneTree:ENSGT00500000044896 InParanoid:Q18164 OMA:PWPAVGI
NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 524 (189.5 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 99/178 (55%), Positives = 130/178 (73%)
Query: 5 KLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXX 64
KL++ G A+FIGIG P + P+F+GLT E GFYTSK +LP VA
Sbjct: 283 KLKEQGAAAVFIGIGNPEPKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCGCKRTPL 342
Query: 65 XPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEF 124
P ++G V+VLGAGDTA DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEF
Sbjct: 343 -PTMRGRVVVLGAGDTAMDCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEF 401
Query: 125 LPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDN 182
LPF +P +++VKD +I ++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++
Sbjct: 402 LPFSAPRKINVKDGRIVSIEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKED 459
>UNIPROTKB|Q18164 [details] [associations]
symbol:dpyd-1 "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:6239 "Caenorhabditis elegans" [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
[GO:0006214 "thymidine catabolic process" evidence=ISS] [GO:0006212
"uracil catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0009055 GO:GO:0046872 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:FO080672
PIR:T15616 RefSeq:NP_508927.2 ProteinModelPortal:Q18164
DIP:DIP-25332N MINT:MINT-1123364 STRING:Q18164 PaxDb:Q18164
EnsemblMetazoa:C25F6.3 GeneID:180818 KEGG:cel:CELE_C25F6.3
CTD:180818 WormBase:C25F6.3 GeneTree:ENSGT00500000044896
InParanoid:Q18164 OMA:PWPAVGI NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 524 (189.5 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 99/178 (55%), Positives = 130/178 (73%)
Query: 5 KLRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXX 64
KL++ G A+FIGIG P + P+F+GLT E GFYTSK +LP VA
Sbjct: 283 KLKEQGAAAVFIGIGNPEPKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGMCGCKRTPL 342
Query: 65 XPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEF 124
P ++G V+VLGAGDTA DCATSALRCGA++V + FRKG T IRAVPEE++ A EEKCEF
Sbjct: 343 -PTMRGRVVVLGAGDTAMDCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKCEF 401
Query: 125 LPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLDN 182
LPF +P +++VKD +I ++FN+TEQ++ G+W EDEEQ + LK +Y+ISAFGSTL ++
Sbjct: 402 LPFSAPRKINVKDGRIVSIEFNKTEQDDNGKWYEDEEQIVILKCDYVISAFGSTLKED 459
>UNIPROTKB|Q28007 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;IDA] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0006212 "uracil
catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0050661 "NADP binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
EMBL:U20981 IPI:IPI00707298 PIR:A44626 RefSeq:NP_776466.1
UniGene:Bt.2424 ProteinModelPortal:Q28007 SMR:Q28007 STRING:Q28007
PRIDE:Q28007 GeneID:281124 KEGG:bta:281124 CTD:1806
HOGENOM:HOG000007797 HOVERGEN:HBG004351 InParanoid:Q28007 KO:K00207
OrthoDB:EOG44J2H8 NextBio:20805192 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 Uniprot:Q28007
Length = 1025
Score = 516 (186.7 bits), Expect = 1.5e-48, P = 1.5e-48
Identities = 107/176 (60%), Positives = 125/176 (71%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT++ GFYTSK FLP VA
Sbjct: 271 LKEEGYKAAFIGIGLPEPKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLLS 330
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
++GTVIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEEV+LA EEKCEFL
Sbjct: 331 --IRGTVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFVNIRAVPEEVELAREEKCEFL 388
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V VK +I MQF RTEQ+E G+W ED +Q LKA+ +ISAFGS L D
Sbjct: 389 PFLSPRKVIVKGGRIVAMQFVRTEQDETGKWNEDGDQIACLKADVVISAFGSVLSD 444
>UNIPROTKB|E2RSQ9 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158
TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896 OMA:PWPAVGI
EMBL:AAEX03004787 EMBL:AAEX03004786 Ensembl:ENSCAFT00000031930
Uniprot:E2RSQ9
Length = 1029
Score = 503 (182.1 bits), Expect = 3.8e-47, P = 3.8e-47
Identities = 101/176 (57%), Positives = 126/176 (71%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P+ N IF+ LT+ GFYTSK FLP VA
Sbjct: 245 LKEEGYKAAFIGIGLPDPNKNSIFKDLTQNHGFYTSKDFLPLVAKSSKAGMCACHSPL-- 302
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSAL CGA +V +VFRKG NIRAVPEEV+LA E+KCEFL
Sbjct: 303 PSIRGVVIVLGAGDTAFDCATSALCCGARRVFIVFRKGFVNIRAVPEEVELAKEKKCEFL 362
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLLD 181
PF+SP +V++K +I +QF RTEQ+E G W E E++ ++LKA+ +ISAFGS L D
Sbjct: 363 PFLSPRKVELKGGRIVAVQFVRTEQDEAGNWHEHEDETVRLKADVVISAFGSVLSD 418
>UNIPROTKB|E1BRA0 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006145 "purine nucleobase catabolic process"
evidence=IEA] [GO:0006210 "thymine catabolic process" evidence=IEA]
[GO:0006212 "uracil catabolic process" evidence=IEA] [GO:0006214
"thymidine catabolic process" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005829
Gene3D:3.20.20.70 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
OMA:PWPAVGI GO:GO:0006210 EMBL:AADN02012893 EMBL:AADN02012894
EMBL:AADN02012895 IPI:IPI00822678 ProteinModelPortal:E1BRA0
Ensembl:ENSGALT00000039100 ArrayExpress:E1BRA0 Uniprot:E1BRA0
Length = 951
Score = 461 (167.3 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 99/182 (54%), Positives = 122/182 (67%)
Query: 3 TLK-LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXX 61
TL+ L++DGY A+FIGIG P N +FQGL + GFYTSK FLP VA
Sbjct: 191 TLRTLKEDGYEAVFIGIGLPEPNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGMCACQS 250
Query: 62 XXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEK 121
P + GTVIVLGAGDTAFDCATSALRCGA +V VVFRKG TNIRAVPEEV+L +++
Sbjct: 251 PL--PSIHGTVIVLGAGDTAFDCATSALRCGARRVFVVFRKGFTNIRAVPEEVKLKKQKQ 308
Query: 122 C-EFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL 180
+ L + Q ++ I GM+F RTEQ G W EDE+Q ++LKA+ +ISAFGS L
Sbjct: 309 TNKVLKILEAPQRSIRHLSIIGMEFVRTEQGSDGNWKEDEDQVVRLKADVVISAFGSVLS 368
Query: 181 DN 182
D+
Sbjct: 369 DS 370
>DICTYBASE|DDB_G0267966 [details] [associations]
symbol:pyd1 "dihydropyrimidine dehydrogenase"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=IEA;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0019483 "beta-alanine
biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 dictyBase:DDB_G0267966 Prosite:PS00198
GO:GO:0005737 GenomeReviews:CM000150_GR Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 EMBL:AAFI02000003
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 KO:K00207 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 OMA:PWPAVGI HSSP:Q28943
eggNOG:COG0167 EMBL:AF545064 RefSeq:XP_647452.1
ProteinModelPortal:Q55FT1 SMR:Q55FT1 STRING:Q55FT1
EnsemblProtists:DDB0231100 GeneID:8616259 KEGG:ddi:DDB_G0267966
ProtClustDB:CLSZ2431542 Uniprot:Q55FT1
Length = 1009
Score = 454 (164.9 bits), Expect = 6.8e-42, P = 6.8e-42
Identities = 87/174 (50%), Positives = 120/174 (68%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+K GY AI++GIG P + P+F LT + GF++SK FLP+V+
Sbjct: 270 LQKQGYEAIYLGIGMPEPKIDPVFNELTSDQGFFSSKEFLPKVSKASKAGMCGCKSQL-- 327
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P L G VIVLGAGDTAFDCATSA RCGA++V V FR+G +++RAVPEEV +A +E+CEFL
Sbjct: 328 PQLNGRVIVLGAGDTAFDCATSAFRCGASRVTVCFRRGFSDMRAVPEEVDIAKDERCEFL 387
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTL 179
P++ P QV +D K+ M+F +TE+ + G + DE+Q ++K +YIISAFGS +
Sbjct: 388 PYVLPKQVIKRDGKVVAMEFYKTEKGDDGNYSVDEDQFFRVKCDYIISAFGSQI 441
>UNIPROTKB|E1C4J1 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
EMBL:AADN02012893 EMBL:AADN02012894 EMBL:AADN02012895
IPI:IPI00597341 Ensembl:ENSGALT00000008842 ArrayExpress:E1C4J1
Uniprot:E1C4J1
Length = 950
Score = 441 (160.3 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 97/182 (53%), Positives = 122/182 (67%)
Query: 3 TLK-LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXX 61
TL+ L++DGY A+FIGIG P N +FQGL + GFYTSK FLP VA
Sbjct: 191 TLRTLKEDGYEAVFIGIGLPEPNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGMCACQS 250
Query: 62 XXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEK 121
P + GTVIVLGAGDTAFDCATSALRCGA +V VVFRKG TNIRAVPEEV+L +++
Sbjct: 251 PL--PSIHGTVIVLGAGDTAFDCATSALRCGARRVFVVFRKGFTNIRAVPEEVKLKKQKQ 308
Query: 122 C-EFLPFMSPVQVDVKDNKIAGMQFNRTEQNEKGEWVEDEEQRIKLKANYIISAFGSTLL 180
+ L + P ++ + + M+F RTEQ G W EDE+Q ++LKA+ +ISAFGS L
Sbjct: 309 TNKHLSIIGP-RIILYGCCLXCMEFVRTEQGSDGNWKEDEDQVVRLKADVVISAFGSVLS 367
Query: 181 DN 182
D+
Sbjct: 368 DS 369
>UNIPROTKB|F1M412 [details] [associations]
symbol:F1M412 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
IPI:IPI00209289 Ensembl:ENSRNOT00000023229 ArrayExpress:F1M412
Uniprot:F1M412
Length = 950
Score = 394 (143.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 87/175 (49%), Positives = 107/175 (61%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXX 65
L+++GY A FIGIG P IFQGLT+ GFYTSK FLP VA
Sbjct: 194 LKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPGMCACHSPL-- 251
Query: 66 PILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFL 125
P ++G VIVLGAGDTAFDCATSALRCGA +V +VFRKG NIRAVPEEV +E++C FL
Sbjct: 252 PSVRGAVIVLGAGDTAFDCATSALRCGARRVFIVFRKGFANIRAVPEEVNQKFEQRCAFL 311
Query: 126 PFMSPVQVDVKDNKIAGMQFNRTEQNEKGE-WVEDEEQRIKLKANYIISAFGSTL 179
F+SP + +D I+ + + RTE E G W+ Q L + I+ F S L
Sbjct: 312 RFLSPRGLIQEDGVISSLAYKRTESYETGNPWMVSSHQSGTLNSICILLDFSSDL 366
>TIGR_CMR|SO_1324 [details] [associations]
symbol:SO_1324 "glutamate synthase, small subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
Pfam:PF00070 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006537
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK12810
OMA:NDFQFID RefSeq:NP_716944.1 ProteinModelPortal:Q8EHA5
GeneID:1169145 KEGG:son:SO_1324 PATRIC:23522304 Uniprot:Q8EHA5
Length = 468
Score = 163 (62.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 50/173 (28%), Positives = 80/173 (46%)
Query: 11 YTAIFIGIGKPNANVIPIFQGLTEEMGFYTSKTFLPRVATXXXXXXXXXXXXXXXPILKG 70
Y A+F+G+G A + +G + G Y + +L + +
Sbjct: 231 YDAVFLGMGTYTAMKAGL-EG-EDAQGVYQALPYL--IGNTHHLMGSTSPDMPYLNLAGK 286
Query: 71 TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSP 130
V+VLG GDTA DC +A+R GA+ V+ +R+ N+ EVQ A EE FL P
Sbjct: 287 RVVVLGGGDTAMDCVRTAVRQGASSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQP 346
Query: 131 VQVDVKDNKIAGMQFNRTEQN-------EKGEWVEDEEQRIKLKANYIISAFG 176
V + +D K+ G++ T+ ++ E + EQ L+A+ +I AFG
Sbjct: 347 VAIKTQDGKVLGVECVETQMGKADASGRQRAEAIVGSEQL--LEADAVIIAFG 397
>TIGR_CMR|CHY_1991 [details] [associations]
symbol:CHY_1991 "glutamate synthase (NADPH),
homotetrameric" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0004355 "glutamate synthase (NADPH) activity"
evidence=ISS] [GO:0006537 "glutamate biosynthetic process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749 RefSeq:YP_360810.1
ProteinModelPortal:Q3AAM4 STRING:Q3AAM4 GeneID:3728589
KEGG:chy:CHY_1991 PATRIC:21277069 OMA:AYRRTIN
BioCyc:CHYD246194:GJCN-1990-MONOMER InterPro:IPR006004
TIGRFAMs:TIGR01316 Uniprot:Q3AAM4
Length = 464
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/154 (31%), Positives = 74/154 (48%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEEM--GFYTSKTFLPRVATXXXXXXXXXXXXX 63
L ++GY A+F+G G +P F G+ E G Y++ FL R
Sbjct: 224 LDEEGYDAVFVGTGAG----LPNFMGIPGENLNGVYSANEFLTRT----NLMKAYLFPEY 275
Query: 64 XXPILKGT-VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKC 122
PI G V VLGAG+ A D A +ALR GA +V +V+R+ + A EE+ A EE
Sbjct: 276 DTPIKVGEKVAVLGAGNVAMDAARTALRLGAKEVYIVYRRSRNEMPARLEEIHHAEEEGV 335
Query: 123 EFLPFMSPVQVDVKDNK-IAGMQFNRTEQNEKGE 155
+F+ +P ++ +N + M+ + E E E
Sbjct: 336 KFMLLTNPTRIIGDENGWVKAMECLKYELGEPDE 369
>UNIPROTKB|P09832 [details] [associations]
symbol:gltD "glutamate synthase, small subunit"
species:83333 "Escherichia coli K-12" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0097054 "L-glutamate
biosynthetic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA;IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 PROSITE:PS51379 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 EMBL:U18997 GO:GO:0051539
GO:GO:0006537 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 GO:GO:0097054 EMBL:M18747 BRENDA:1.4.1.13
PIR:G65112 RefSeq:NP_417680.1 RefSeq:YP_491398.1
ProteinModelPortal:P09832 SMR:P09832 DIP:DIP-9803N IntAct:P09832
MINT:MINT-1248739 SWISS-2DPAGE:P09832 PaxDb:P09832 PRIDE:P09832
EnsemblBacteria:EBESCT00000004091 EnsemblBacteria:EBESCT00000017797
GeneID:12933433 GeneID:947723 KEGG:ecj:Y75_p3133 KEGG:eco:b3213
PATRIC:32121848 EchoBASE:EB0399 EcoGene:EG10404 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 BioCyc:EcoCyc:GLUSYNSMALL-MONOMER
BioCyc:ECOL316407:JW3180-MONOMER BioCyc:MetaCyc:GLUSYNSMALL-MONOMER
BioCyc:MOB3B:GLUSYNSMALL-MONOMER Genevestigator:P09832
Uniprot:P09832
Length = 472
Score = 156 (60.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 56/177 (31%), Positives = 84/177 (47%)
Query: 11 YTAIFIGIGKPNANVIPIFQGLTEEM--GFYTSKTFLPRVATXXXXXXXXXXXXXXXPIL 68
Y A+F+G+G + + GL E G Y + FL +A +
Sbjct: 232 YDAVFLGVGTYQS----MRGGLENEDADGVYAALPFL--IANTKQLMGFGETRDEPFVSM 285
Query: 69 KGT-VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPF 127
+G V+VLG GDTA DC +++R GA V +R+ N+ EV+ A EE EF
Sbjct: 286 EGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFN 345
Query: 128 MSPVQVDVKDN-KIAGMQFNRTEQNE---KG----EWVEDEEQRIKLKANYIISAFG 176
+ P+ ++V N K++G++ RTE E KG E V E + A+ +I AFG
Sbjct: 346 VQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVP--ADAVIMAFG 400
>TIGR_CMR|GSU_3057 [details] [associations]
symbol:GSU_3057 "glutamate synthase (NADPH),
homotetrameric" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000031439
Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
OMA:AYRRTIN InterPro:IPR006004 TIGRFAMs:TIGR01316
RefSeq:NP_954099.1 ProteinModelPortal:Q748E7 GeneID:2686900
KEGG:gsu:GSU3057 PATRIC:22028965
BioCyc:GSUL243231:GH27-2997-MONOMER Uniprot:Q748E7
Length = 470
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 3 TLKLRKDGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXX 60
TL ++ + A+FI N +P+ + E G Y++ +L RV
Sbjct: 227 TLAQLREEFDAVFIA----NGAGLPVMLSIPGENLKGVYSANEYLTRV----NLMGAGRD 278
Query: 61 XXXXXPILKGT-VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWE 119
PI+ G V V+G G+TA DC +A R GA + ++++R+ + A EE++ A E
Sbjct: 279 PGSTTPIIAGKRVAVIGGGNTAMDCVRTARRLGAERAMIIYRRSEEQMPARVEEIKHAKE 338
Query: 120 EKCEFLPFMSPVQVDV-KDNKIAGMQFNRTE 149
E EF+ +P+ + KD +A ++ R E
Sbjct: 339 EGVEFVMLTAPIAIGGDKDGWVATLRCLRME 369
>UNIPROTKB|Q9KPJ0 [details] [associations]
symbol:VC_2377 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 3 TLKLRKDGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXX 60
TL+ D Y A+F+G+G + GL E G Y + LP + +
Sbjct: 225 TLQQLLDEYDAVFLGVGTYQY----MRAGLANEDAPGVYDA---LPFLISNTYKVMELNN 277
Query: 61 XXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEE 120
+ V+VLG GDTA DC +++R GA++V+ +R+ N+ EV+ A EE
Sbjct: 278 EAPFIDMAGKNVVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEE 337
Query: 121 KCEFLPFMSPVQVDVK-DNKIAGMQFNRTEQNE-------KGEWVEDEEQRIKLKANYII 172
EF+ + P+ ++V ++ G++ +T E K E V E L A+ +I
Sbjct: 338 GVEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAGSEH--VLPADAVI 395
Query: 173 SAFG 176
AFG
Sbjct: 396 MAFG 399
>TIGR_CMR|VC_2377 [details] [associations]
symbol:VC_2377 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 3 TLKLRKDGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXX 60
TL+ D Y A+F+G+G + GL E G Y + LP + +
Sbjct: 225 TLQQLLDEYDAVFLGVGTYQY----MRAGLANEDAPGVYDA---LPFLISNTYKVMELNN 277
Query: 61 XXXXXPILKGTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEE 120
+ V+VLG GDTA DC +++R GA++V+ +R+ N+ EV+ A EE
Sbjct: 278 EAPFIDMAGKNVVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEE 337
Query: 121 KCEFLPFMSPVQVDVK-DNKIAGMQFNRTEQNE-------KGEWVEDEEQRIKLKANYII 172
EF+ + P+ ++V ++ G++ +T E K E V E L A+ +I
Sbjct: 338 GVEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAGSEH--VLPADAVI 395
Query: 173 SAFG 176
AFG
Sbjct: 396 MAFG 399
>UNIPROTKB|P37127 [details] [associations]
symbol:aegA species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009987 "cellular process"
evidence=ND] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR006006 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 InterPro:IPR017900
Prosite:PS00198 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 EMBL:L34011 PIR:C65022 RefSeq:NP_416963.1
RefSeq:YP_490695.1 ProteinModelPortal:P37127 SMR:P37127
DIP:DIP-9060N IntAct:P37127 PRIDE:P37127
EnsemblBacteria:EBESCT00000003403 EnsemblBacteria:EBESCT00000017287
GeneID:12931935 GeneID:947383 KEGG:ecj:Y75_p2420 KEGG:eco:b2468
PATRIC:32120319 EchoBASE:EB2308 EcoGene:EG12409
HOGENOM:HOG000031439 OMA:VESRYRY ProtClustDB:PRK12769
BioCyc:EcoCyc:EG12409-MONOMER BioCyc:ECOL316407:JW2452-MONOMER
Genevestigator:P37127 GO:GO:0016639 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 Uniprot:P37127
Length = 659
Score = 147 (56.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 11 YTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXPIL 68
Y A+F+G+G + + GL E G Y + FL +A
Sbjct: 413 YDAVFVGVGTYRS----MKAGLPNEDAPGVYDALPFL--IANTKQVMGLEELPEEPFINT 466
Query: 69 KG-TVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPF 127
G V+VLG GDTA DC +ALR GA+ V +R+ N+ +EV+ A EE F
Sbjct: 467 AGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFN 526
Query: 128 MSPVQVDVKDN-KIAGMQFNRT---EQNEKGEW--VEDEEQRIKLKANYIISAFG 176
+ PV +++ + + G++F RT E + +G V E + A+ +I AFG
Sbjct: 527 VQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFG 581
>TIGR_CMR|DET_0038 [details] [associations]
symbol:DET_0038 "glutamate synthase (NADPH),
homotetrameric" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
InterPro:IPR006004 TIGRFAMs:TIGR01316 RefSeq:YP_180793.1
ProteinModelPortal:Q3ZAF6 STRING:Q3ZAF6 GeneID:3229074
KEGG:det:DET0038 PATRIC:21607179 OMA:CSANEFL
BioCyc:DETH243164:GJNF-38-MONOMER Uniprot:Q3ZAF6
Length = 465
Score = 142 (55.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 44/130 (33%), Positives = 62/130 (47%)
Query: 6 LRKDGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXX 63
L K G+ A+F+ G +P+F + E G Y++ FL RV
Sbjct: 225 LFKQGFQAVFLATGAG----LPLFLNVQGENLSGVYSANEFLTRV----NLMKAHNFPSS 276
Query: 64 XXPILKGT-VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKC 122
P+ KG V V+G G+ A D A ALR GA +V +V+R+ + A EEV A EE
Sbjct: 277 DTPVKKGRKVAVIGGGNVAMDAARCALRLGAEEVSIVYRRSELELPARKEEVDNAREEGI 336
Query: 123 EFLPFMSPVQ 132
+F SPV+
Sbjct: 337 KFHFLTSPVR 346
>TIGR_CMR|CPS_4502 [details] [associations]
symbol:CPS_4502 "glutamate synthase, small subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 RefSeq:YP_271150.1
ProteinModelPortal:Q47VM2 STRING:Q47VM2 GeneID:3522364
KEGG:cps:CPS_4502 PATRIC:21471827
BioCyc:CPSY167879:GI48-4511-MONOMER Uniprot:Q47VM2
Length = 475
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/181 (28%), Positives = 80/181 (44%)
Query: 9 DGYTAIFIGIGKPNANVIPIFQGLTEE--MGFYTSKTFLPRVATXXXXXXXXXXXXXXXP 66
D Y A+F+G+G + G E G Y + FL T P
Sbjct: 230 DEYDAVFLGLG----TYTDMSGGFDNEGAQGVYNALDFLIG-NTQNLMGFTKADNAQVKP 284
Query: 67 ILK---GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCE 123
+ VIVLG GDTA DC +++R A V +R+ N+ P EVQ A EE
Sbjct: 285 YVNFKDKKVIVLGGGDTAMDCVRTSIRQDATSVTCAYRRDEANMPGSPREVQNAKEEGVN 344
Query: 124 FLPFMSPVQVDVKDNKIA-GMQFNRTE---QNEKG----EWVEDEEQRIKLKANYIISAF 175
F + P+ + V + +A G++F +T+ + G E + D E ++A+ ++ AF
Sbjct: 345 FEFNLQPLDIAVNEQGVAIGVKFVKTQLGSPDANGRRNPEPIADSE--FIMEADAVVIAF 402
Query: 176 G 176
G
Sbjct: 403 G 403
>UNIPROTKB|Q4KJI5 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK12810 RefSeq:YP_257598.1 ProteinModelPortal:Q4KJI5
STRING:Q4KJI5 GeneID:3481045 KEGG:pfl:PFL_0454 PATRIC:19870053
OMA:NDFQFID BioCyc:PFLU220664:GIX8-455-MONOMER Uniprot:Q4KJI5
Length = 472
Score = 128 (50.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 11 YTAIFIGIGKPNANVIPIFQGLTEEM-GFYTSKTFLPRVATXXXXXXXXXXXXXXXPILK 69
Y A+F+G+G + F G E++ G Y + FL +A +
Sbjct: 235 YDAVFMGMGT-YTYMKGGFAG--EDLPGVYDALDFL--IANVNRNLGFEKSPEDFVDMKG 289
Query: 70 GTVIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMS 129
V+VLG GDTA DC +++R GA V +R+ N+ +EV+ A EE +FL
Sbjct: 290 KKVVVLGGGDTAMDCNRTSIRQGAKSVTCAYRRDEANMPGSRKEVKNAKEEGVKFLYNRQ 349
Query: 130 PVQVDVKDNKIAGMQFNRT---EQNEKG----EWVEDEEQRIKLKANYIISAFG 176
P+ + V ++++ G++ T E + +G E + E+ I A+ ++ AFG
Sbjct: 350 PIAI-VGEDRVEGVKVVETRLGEPDARGRRSPEPIPGSEEIIP--ADAVVIAFG 400
>UNIPROTKB|Q0C617 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR006006 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 EMBL:CP000158 GenomeReviews:CP000158_GR
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_758826.1 ProteinModelPortal:Q0C617 STRING:Q0C617
GeneID:4289253 KEGG:hne:HNE_0092 PATRIC:32212968 OMA:ANIDNEN
BioCyc:HNEP228405:GI69-139-MONOMER Uniprot:Q0C617
Length = 481
Score = 125 (49.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 72 VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPV 131
V+V+G GDTA DC +A+R GA V ++R+ N+ EVQ A EE F +P
Sbjct: 292 VVVIGGGDTAMDCVRTAIRQGAKSVTCLYRRDRVNMPGSQREVQNAEEEGVVFEWLANPE 351
Query: 132 QV-DVKDNKIAGMQFNRTEQNE---KGEWVEDEE-QRIKLKANYIISAFG 176
+ D K K+ ++ +R + E G + + +KA+ +I A G
Sbjct: 352 AIIDSKGGKVKAVRASRMKLGEPDASGRQSPVKTGETFDVKADMVIKALG 401
>UNIPROTKB|Q46811 [details] [associations]
symbol:ygfK "predicted oxidoreductase, Fe-S subunit"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA;TAS] InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 Pfam:PF13187 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 Gene3D:3.20.20.70 GO:GO:0005506
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016491 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 EMBL:U28375 SUPFAM:SSF46548 PIR:F65071
RefSeq:NP_417354.1 RefSeq:YP_491080.1 ProteinModelPortal:Q46811
SMR:Q46811 DIP:DIP-28091N IntAct:Q46811 PRIDE:Q46811
EnsemblBacteria:EBESCT00000000821 EnsemblBacteria:EBESCT00000015587
GeneID:12933331 GeneID:949068 KEGG:ecj:Y75_p2811 KEGG:eco:b2878
PATRIC:32121166 EchoBASE:EB2873 EcoGene:EG13061
HOGENOM:HOG000277437 KO:K12527 OMA:CPNRANI ProtClustDB:PRK09853
BioCyc:EcoCyc:G7497-MONOMER BioCyc:ECOL316407:JW5923-MONOMER
Genevestigator:Q46811 InterPro:IPR017701 TIGRFAMs:TIGR03315
Uniprot:Q46811
Length = 1032
Score = 125 (49.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 72 VIVLGAGDTAFDCATSALRC-GANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSP 130
V+V+GAG+TA DCA +ALR G K +V+R+ + A EE + A + EF +P
Sbjct: 681 VVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNP 740
Query: 131 VQVDVKDNKIAGMQFNRTEQNEKGEW--VEDEEQRIKLKANYIISAFG 176
+ D D + + E +EKG VE E + L + +I+A G
Sbjct: 741 ERFDA-DGTLTLRVMSLGEPDEKGRRRPVETNET-VTLLVDSLITAIG 786
>TIGR_CMR|SPO_3770 [details] [associations]
symbol:SPO_3770 "glutamate synthase, small subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_168965.1 ProteinModelPortal:Q5LLZ4 GeneID:3196508
KEGG:sil:SPO3770 PATRIC:23381037 OMA:EFRIPIY Uniprot:Q5LLZ4
Length = 477
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 72 VIVLGAGDTAFDCATSALRCGANKVLVVFRKGCTNIRAVPEEVQLAWEEKCEFLPFMSPV 131
V+V+G GDTA DC +A+R GA V +R+ N+ E Q A EE F ++S
Sbjct: 292 VVVIGGGDTAMDCVRTAIRQGAVSVKCFYRRDRANMPGSQRETQNAEEEGVVF-EWLSAP 350
Query: 132 QVDVKDNKIAGMQFNR 147
+ D+K+AG+ +
Sbjct: 351 KGFTGDDKVAGVMVQK 366
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 183 168 0.00079 108 3 11 22 0.39 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 579 (62 KB)
Total size of DFA: 153 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.67u 0.08s 14.75t Elapsed: 00:00:01
Total cpu time: 14.68u 0.08s 14.76t Elapsed: 00:00:01
Start: Thu Aug 15 15:15:12 2013 End: Thu Aug 15 15:15:13 2013